Citrus Sinensis ID: 023979

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270----
Protein Sequence
MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSWELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSRGYVDWSQGCERDKSLNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRKLVYVTPL
Secondary Structure (PSIPRED)
ccEEEEccccccEEEEEcccccccccccEEEEEEcccccEEEEEEccEEEEEEccccccEEEcccccccccEEEEEEEEccEEEEEEEEcccccEEEEEEEccccEEEEEEEEcccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccEEEcccccccccccEEEEccccHHHHHHHHHccccccccccccccccccEEEEEccccEEEEEcccccEEEEEEEEccccccccEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccccccHEEccccccccccccEEEEEccccccEEEEEcccEEEEEccccccEEEcccccccccEEEEEEEEcccEEEEEEEEEcccEEEEEEEcccccEEEEEEEccccccEEEEEEccccccccHcHcccccEEccccccccccccccccccHcHcccccccEEccEccccccccEEEccccccccccEEEEEccccHHHHHHHHHcccccEEEEccEccccccEEEEEcccHHHHHHHHcccccEEEEEEHHHHHcccccccEEc
Coil and Loop (DISEMBL)
mkfgwdlktgldrritswkspddpspgnfiwaverqdnpelimwkgsrkfhrsgpwnglrfsasslrpnpvfnfgfvSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQswelysnvprdlcdtYALCGAYgiciisdmpvcqclkgfkpksrgyvdwsqgcerdkslnysrqdgfikftamklpdatLSWVSKSmnlnecrekcldnsscmaytnsdirgegsgcamwfgelidmrdfpdggqdLYIRMSAseigtrklvyvtpl
Flexible Loop (DISEMBL)
mkfgwdlktgldrritswkspddpspgnFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFsasslrpnpvFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSWELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSRGYVDWSQGCERDKSLNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFGELIDMRDFPDGGQDLYIRMsaseigtrklvyvtpl
Low Complexity Region (SEG)
MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSWELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSRGYVDWSQGCERDKSLNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRKLVYVTPL
Disordered region (IsUnstruct)
***************************NFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSWELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSRGYVDWSQGCERDKSLNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRKLVYV***
Disordered Region (DISOPRED)
MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSWELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSRGYVDWSQGCERDKSLNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRKLVYVTPL
Disordered Region (DISEMBL)
MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSWELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSRGYVDWSQGCERDKSLNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRKLVYVTPL
Disordered Region (DISPRO)
**FGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSWELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSRGYVDWSQGCERDKSLNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRKLV****L
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSWELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSRGYVDWSQGCERDKSLNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRKLVYVTPL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	274	2.2.26 [Sep-21-2011]
O81832	783	G-type lectin S-receptor-	yes	no	0.963	0.337	0.444	1e-65
O81905	850	Receptor-like serine/thre	no	no	0.970	0.312	0.428	2e-65
Q39086	843	Receptor-like serine/thre	no	no	0.963	0.313	0.396	2e-58
P07761	436	S-locus-specific glycopro	N/A	no	0.952	0.598	0.406	2e-57
P17840	435	S-locus-specific glycopro	N/A	no	0.952	0.6	0.400	1e-56
Q09092	857	Putative serine/threonine	N/A	no	0.967	0.309	0.389	8e-55
P0DH87	546	Putative inactive G-type	no	no	0.959	0.481	0.399	3e-54
P22553	435	S-locus-specific glycopro	N/A	no	0.952	0.6	0.384	5e-54
P0DH86	853	G-type lectin S-receptor-	no	no	0.959	0.308	0.395	6e-54
Q9S972	847	Receptor-like serine/thre	no	no	0.974	0.315	0.386	7e-54

>sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4

 Score =  249 bits (636), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 120/270 (44%), Positives = 178/270 (65%), Gaps = 6/270 (2%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK+G +  TGL+R +TSW++ DDPS GN+   ++    P+  + K S    R+GPWNGLR
Sbjct: 162 MKYGLNFVTGLNRFLTSWRAIDDPSTGNYTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLR 221

Query: 61  FSA-SSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
           F+   +L+PNP++ + +V  E E+YY + + + +   R+ +N    L QR+TW    QSW
Sbjct: 222 FTGMPNLKPNPIYRYEYVFTEEEVYYTYKLENPSVLTRMQLNPNGAL-QRYTWVDNLQSW 280

Query: 120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKS-RGYV--DWSQGCERDKSL 176
             Y +   D CD Y LCG+YG C I++ P C+CLKGF  K+ + +V  DWS+GC R   L
Sbjct: 281 NFYLSAMMDSCDQYTLCGSYGSCNINESPACRCLKGFVAKTPQAWVAGDWSEGCVRRVKL 340

Query: 177 NYSR-QDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCA 235
           +  + +DGF+K + +KLPD   SW  K+M+LNEC++ CL N +C AY+  DIR  G GC 
Sbjct: 341 DCGKGEDGFLKISKLKLPDTRTSWYDKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCI 400

Query: 236 MWFGELIDMRDFPDGGQDLYIRMSASEIGT 265
           +WFG+LID+R++ + GQDLY+R+++SEI T
Sbjct: 401 LWFGDLIDIREYNENGQDLYVRLASSEIET 430

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1

 Score =  249 bits (636), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 116/271 (42%), Positives = 170/271 (62%), Gaps = 5/271 (1%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK GWD KTG +R I SWKSPDDPS G+F + +E +  PE+ +W    + +RSGPWNG+R
Sbjct: 167 MKLGWDAKTGFNRFIRSWKSPDDPSSGDFSFKLETEGFPEIFLWNRESRMYRSGPWNGIR 226

Query: 61  FS-ASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
           FS    ++P     F F +++ E+ Y F +     + R+ ++ +  L+QRFTW +  Q+W
Sbjct: 227 FSGVPEMQPFEYMVFNFTTSKEEVTYSFRITKSDVYSRLSISSS-GLLQRFTWIETAQNW 285

Query: 120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDKSL 176
             +   P+D CD Y  CG YG C  +  PVC C+KGFKP++    G  D S GC R   L
Sbjct: 286 NQFWYAPKDQCDEYKECGVYGYCDSNTSPVCNCIKGFKPRNPQVWGLRDGSDGCVRKTLL 345

Query: 177 NYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAM 236
           +    DGF++   MKLPD T + V + + + EC +KCL + +C A+ N+DIRG GSGC  
Sbjct: 346 SCGGGDGFVRLKKMKLPDTTTASVDRGIGVKECEQKCLRDCNCTAFANTDIRGSGSGCVT 405

Query: 237 WFGELIDMRDFPDGGQDLYIRMSASEIGTRK 267
           W GEL D+R++  GGQDLY+R++A+++  ++
Sbjct: 406 WTGELFDIRNYAKGGQDLYVRLAATDLEDKR 436

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1

 Score =  226 bits (575), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 109/275 (39%), Positives = 166/275 (60%), Gaps = 11/275 (4%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK GWD KTG +R + SWK+ DDPS G F   +E  + PE  +       +RSGPWNG+R
Sbjct: 161 MKLGWDQKTGFNRILRSWKTTDDPSSGEFSTKLETSEFPEFYICSKESILYRSGPWNGMR 220

Query: 61  FSASSLRPNPV----FNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKAT 116
           FS+    P  +      + F +++ E+ Y + +     + R+ +N +  L+QR TW + T
Sbjct: 221 FSSV---PGTIQVDYMVYNFTASKEEVTYSYRINKTNLYSRLYLN-SAGLLQRLTWFETT 276

Query: 117 QSWELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERD 173
           QSW+     P+DLCD Y +CG +G C  + +P C C+KGFKP +       D S GC R 
Sbjct: 277 QSWKQLWYSPKDLCDNYKVCGNFGYCDSNSLPNCYCIKGFKPVNEQAWDLRDGSAGCMRK 336

Query: 174 KSLNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSG 233
             L+   +DGF +   MKLPD T + V + + L  C+E+CL++ +C A+ N+DIR  GSG
Sbjct: 337 TRLSCDGRDGFTRLKRMKLPDTTATIVDREIGLKVCKERCLEDCNCTAFANADIRNGGSG 396

Query: 234 CAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRKL 268
           C +W  E++DMR++  GGQDLY+R++A+E+  +++
Sbjct: 397 CVIWTREILDMRNYAKGGQDLYVRLAAAELEDKRI 431

Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P07761|SLSG6_BRAOL S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2

 Score =  222 bits (566), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 109/268 (40%), Positives = 163/268 (60%), Gaps = 7/268 (2%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK G+DLKTGL+R +TSW+S DDPS G+F + +E +  PE  +W G    HRSGPWNG+R
Sbjct: 170 MKLGYDLKTGLNRFLTSWRSSDDPSSGDFSYKLETRSLPEFYLWHGIFPMHRSGPWNGVR 229

Query: 61  FSASSLRPNPVFN-FGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
           FS         +  + F  N  E+ Y F M + + + R+ ++   Y  QR TWN +   W
Sbjct: 230 FSGIPEDQKLSYMVYNFTENSEEVAYTFRMTNNSIYSRLTLSSEGYF-QRLTWNPSIGIW 288

Query: 120 ELYSNVPRD-LCDTYALCGAYGICIISDMPVCQCLKGFKPKSRGYVD---WSQGCERDKS 175
             + + P D  CDTY +CG Y  C ++  PVC C++GF P++    D   W+ GC R   
Sbjct: 289 NRFWSSPVDPQCDTYIMCGPYAYCGVNTSPVCNCIQGFNPRNIQQWDQRVWAGGCIRRTR 348

Query: 176 LNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCA 235
           L+ S  DGF +   MKLP+ T++ V +S+ + EC ++CL + +C A+ N+DIR  G+GC 
Sbjct: 349 LSCS-GDGFTRMKNMKLPETTMAIVDRSIGVKECEKRCLSDCNCTAFANADIRNGGTGCV 407

Query: 236 MWFGELIDMRDFPDGGQDLYIRMSASEI 263
           +W G L DMR++   GQDLY+R++ +++
Sbjct: 408 IWTGRLDDMRNYVAHGQDLYVRLAVADL 435

Involved in sporophytic self-incompatibility system (the inability of flowering plants to achieve self-fertilization).

Brassica oleracea (taxid: 3712)

>sp|P17840|SLSG3_BRAOL S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2

 Score =  219 bits (559), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 107/267 (40%), Positives = 163/267 (61%), Gaps = 6/267 (2%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK G+DLKTGL+R +TSW+S DDPS G++ + +E +  PE  +  GS + HRSGPWNG R
Sbjct: 170 MKLGYDLKTGLNRFLTSWRSSDDPSSGDYSYKLELRRLPEFYLSSGSFRLHRSGPWNGFR 229

Query: 61  FSASSLRPNPVFN-FGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
            S         +  + F  N  E  Y F M + + + R+ ++ T Y  +R TW  ++  W
Sbjct: 230 ISGIPEDQKLSYMVYNFTENSEEAAYTFLMTNNSFYSRLTISSTGYF-ERLTWAPSSVVW 288

Query: 120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSRGYVDW---SQGCERDKSL 176
            ++ + P   CD Y +CG Y  C ++  PVC C++GF+PK+R   D    + GC R   L
Sbjct: 289 NVFWSSPNHQCDMYRMCGPYSYCDVNTSPVCNCIQGFRPKNRQQWDLRIPTSGCIRRTRL 348

Query: 177 NYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAM 236
           + S  DGF +   MKLP+ T++ V +S+ L EC ++CL + +C A+ N+DIR  G+GC +
Sbjct: 349 SCS-GDGFTRMKNMKLPETTMAIVHRSIGLKECEKRCLSDCNCTAFANADIRNRGTGCVI 407

Query: 237 WFGELIDMRDFPDGGQDLYIRMSASEI 263
           W GEL D+R +   GQDLY+R++A+++
Sbjct: 408 WTGELEDIRTYFADGQDLYVRLAAADL 434

Involved in sporophytic self-incompatibility system (the inability of flowering plants to achieve self-fertilization).

Brassica oleracea (taxid: 3712)

>sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2

 Score =  213 bits (543), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 107/275 (38%), Positives = 166/275 (60%), Gaps = 10/275 (3%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK G++LKTGL+R +TSW+S DDPS GNF + +E Q  PE  + + +   HRSGPWNG+R
Sbjct: 169 MKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLETQSLPEFYLSRENFPMHRSGPWNGIR 228

Query: 61  FSASSLRPNPVFN-FGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
           FS         +  + F+ N  E+ Y F M + + + R+ +    Y  QR TW  + + W
Sbjct: 229 FSGIPEDQKLSYMVYNFIENNEEVAYTFRMTNNSFYSRLTLISEGYF-QRLTWYPSIRIW 287

Query: 120 ELYSNVPRD-LCDTYALCGAYGICIISDMPVCQCLKGFKPKSRGYVD---WSQGCERDKS 175
             + + P D  CDTY +CG Y  C ++  PVC C++GF P++    D   W+ GC R   
Sbjct: 288 NRFWSSPVDPQCDTYIMCGPYAYCDVNTSPVCNCIQGFNPRNIQQWDQRVWAGGCIRRTQ 347

Query: 176 LNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCA 235
           L+ S  DGF +   MKLP+ T++ V +S+ + EC+++C+ + +C A+ N+DIR  GSGC 
Sbjct: 348 LSCS-GDGFTRMKKMKLPETTMATVDRSIGVKECKKRCISDCNCTAFANADIRNGGSGCV 406

Query: 236 MWFGELIDMRDFPD---GGQDLYIRMSASEIGTRK 267
           +W   L D+R++      GQDLY+R++A++I  ++
Sbjct: 407 IWTERLEDIRNYATDAIDGQDLYVRLAAADIAKKR 441

Involved in sporophytic self-incompatibility system (the inability of flowering plants to achieve self-fertilization), probably acting in combination with S-locus-specific glycoproteins. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain.

Brassica oleracea var. acephala (taxid: 3713)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P0DH87|PSRK_ARATH Putative inactive G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=PSEUDOSRKA PE=5 SV=1

 Score =  212 bits (539), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 109/273 (39%), Positives = 157/273 (57%), Gaps = 10/273 (3%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK G D K GL+R +TSWKS  DPS G+F++ +E    PE   +    + +RSGPW+GLR
Sbjct: 168 MKLGRDHKRGLNRFVTSWKSSFDPSSGSFMFKLETLGLPEFFGFTSFLEVYRSGPWDGLR 227

Query: 61  FSAS-SLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
           FS    ++      + F  N  E+ Y F + D  ++ R+ +N T+  ++ FTW    Q W
Sbjct: 228 FSGILEMQQWDDIIYNFTENREEVAYTFRVTDHNSYSRLTIN-TVGRLEGFTWEPTQQEW 286

Query: 120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSRGYVDWSQG-----CERDK 174
            ++  +P+D CD Y +CG Y  C +S  P C C+KGF+P S    DW+ G     C R  
Sbjct: 287 NMFWFMPKDTCDLYGICGPYAYCDMSTSPTCNCIKGFQPLSPQ--DWASGDVTGRCRRKT 344

Query: 175 SLNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGC 234
            L    +D F +   MK+P  T + V K + L EC EKC  + +C AY NSDIR  GSGC
Sbjct: 345 QLTCG-EDRFFRLMNMKIPATTAAIVDKRIGLKECEEKCKTHCNCTAYANSDIRNGGSGC 403

Query: 235 AMWFGELIDMRDFPDGGQDLYIRMSASEIGTRK 267
            +W GE  D+R++   GQDL++R++A+E G R+
Sbjct: 404 IIWIGEFRDIRNYAADGQDLFVRLAAAEFGERR 436

Truncated and inactivated form of SRK, the female specificity determinant of self-incompatibility when active. Most A.thaliana cultivars contain such an inactive form and thus, are self-fertiles.

Arabidopsis thaliana (taxid: 3702)

>sp|P22553|SLSG2_BRAOA S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1

 Score =  211 bits (537), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 103/268 (38%), Positives = 162/268 (60%), Gaps = 7/268 (2%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK G+DL+TGL+R +TSW+S DDPS G+F + ++ +  PE  ++K     HRSGPWNG+ 
Sbjct: 169 MKLGYDLRTGLNRFLTSWRSSDDPSSGDFSYKLQTRRLPEFYLFKDDFLVHRSGPWNGVG 228

Query: 61  FSASSLRPNPVFN-FGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
           FS         +  + F  N  E+ Y F M + + + R+ ++ + Y  +R TW  ++  W
Sbjct: 229 FSGMPEDQKLSYMVYNFTQNSEEVAYTFLMTNNSIYSRLTISSSGYF-ERLTWTPSSGMW 287

Query: 120 ELYSNVPRDL-CDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDKS 175
            ++ + P D  CD Y +CGAY  C ++  PVC C++ F P +    G   WS GC R   
Sbjct: 288 NVFWSSPEDFQCDVYKICGAYSYCDVNTSPVCNCIQRFDPSNVQEWGLRAWSGGCRRRTR 347

Query: 176 LNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCA 235
           L+ S  DGF +   MKLP+ T++ V +S+ L EC ++CL + +C A+ N+DIR  G+GC 
Sbjct: 348 LSCS-GDGFTRMKKMKLPETTMAIVDRSIGLKECEKRCLSDCNCTAFANADIRNGGTGCV 406

Query: 236 MWFGELIDMRDFPDGGQDLYIRMSASEI 263
           +W G+L D+R +   GQDLY+R++ +++
Sbjct: 407 IWTGQLEDIRTYFANGQDLYVRLAPADL 434

Involved in sporophytic self-incompatibility system (the inability of flowering plants to achieve self-fertilization).

Brassica oleracea var. alboglabra (taxid: 3714)

>sp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1

 Score =  211 bits (536), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 108/273 (39%), Positives = 156/273 (57%), Gaps = 10/273 (3%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK G D K GL+R +TSWKS  DPS G+F++ +E    PE   +    + +RSGPW+GLR
Sbjct: 168 MKLGRDHKRGLNRFVTSWKSSFDPSSGSFMFKLETLGLPEFFGFTSFLEVYRSGPWDGLR 227

Query: 61  FSAS-SLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
           FS    ++      + F  N  E+ Y F + D  ++ R+ +N T+  ++ F W    Q W
Sbjct: 228 FSGILEMQQWDDIIYNFTENREEVAYTFRVTDHNSYSRLTIN-TVGRLEGFMWEPTQQEW 286

Query: 120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSRGYVDWSQG-----CERDK 174
            ++  +P+D CD Y +CG Y  C +S  P C C+KGF+P S    DW+ G     C R  
Sbjct: 287 NMFWFMPKDTCDLYGICGPYAYCDMSTSPTCNCIKGFQPLSPQ--DWASGDVTGRCRRKT 344

Query: 175 SLNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGC 234
            L    +D F +   MK+P  T + V K + L EC EKC  + +C AY NSDIR  GSGC
Sbjct: 345 QLTCG-EDRFFRLMNMKIPATTAAIVDKRIGLKECEEKCKTHCNCTAYANSDIRNGGSGC 403

Query: 235 AMWFGELIDMRDFPDGGQDLYIRMSASEIGTRK 267
            +W GE  D+R++   GQDL++R++A+E G R+
Sbjct: 404 IIWIGEFRDIRNYAADGQDLFVRLAAAEFGERR 436

Female specificity determinant of self-incompatibility.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2

 Score =  210 bits (535), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 105/272 (38%), Positives = 158/272 (58%), Gaps = 5/272 (1%)

Query: 1   MKFGWDLKTG-LDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGL 59
           MK GWD K+G  +R + SWK+ DDPS G+F   +     PE  ++      +RSGPW G 
Sbjct: 165 MKMGWDNKSGGFNRILRSWKTTDDPSSGDFSTKLRTSGFPEFYIYNKESITYRSGPWLGN 224

Query: 60  RFSA-SSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQS 118
           RFS+   ++P    +  F  N  ++ Y + +     +  + ++ T  L+QR TW +A QS
Sbjct: 225 RFSSVPGMKPVDYIDNSFTENNQQVVYSYRVNKTNIYSILSLSST-GLLQRLTWMEAAQS 283

Query: 119 WELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKP--KSRGYVDWSQGCERDKSL 176
           W+     P+DLCD Y  CG YG C  +  P+C C+KGF+P  +     D S GC R   L
Sbjct: 284 WKQLWYSPKDLCDNYKECGNYGYCDANTSPICNCIKGFEPMNEQAALRDDSVGCVRKTKL 343

Query: 177 NYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAM 236
           +   +DGF++   M+LPD T + V K + L EC E+CL   +C A+ N+DIR  GSGC +
Sbjct: 344 SCDGRDGFVRLKKMRLPDTTETSVDKGIGLKECEERCLKGCNCTAFANTDIRNGGSGCVI 403

Query: 237 WFGELIDMRDFPDGGQDLYIRMSASEIGTRKL 268
           W G L D+R++  GGQDLY+R++A ++  +++
Sbjct: 404 WSGGLFDIRNYAKGGQDLYVRVAAGDLEDKRI 435

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	274
224126243	836	predicted protein [Populus trichocarpa]	0.952	0.312	0.610	4e-95
224151394	439	predicted protein [Populus trichocarpa]	0.992	0.619	0.589	4e-94
224113149	820	predicted protein [Populus trichocarpa]	0.952	0.318	0.593	2e-93
224124250	820	predicted protein [Populus trichocarpa]	0.952	0.318	0.593	2e-93
224113157	786	predicted protein [Populus trichocarpa]	0.956	0.333	0.586	4e-93
224113153	785	predicted protein [Populus trichocarpa]	0.956	0.333	0.586	7e-93
224115136	843	predicted protein [Populus trichocarpa]	0.974	0.316	0.588	2e-91
224122938	371	predicted protein [Populus trichocarpa]	0.883	0.652	0.607	3e-87
356546914	788	PREDICTED: G-type lectin S-receptor-like	0.959	0.333	0.542	4e-86
356514931	818	PREDICTED: G-type lectin S-receptor-like	0.970	0.325	0.538	3e-79

>gi|224126243|ref|XP_002319790.1| predicted protein [Populus trichocarpa] gi|222858166|gb|EEE95713.1| predicted protein [Populus trichocarpa]

 Score =  353 bits (906), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 163/267 (61%), Positives = 209/267 (78%), Gaps = 6/267 (2%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK GWDL+ GLDRR+++WKSPDDPS G+F W  + Q NPEL++WKGS K+ RSGPWNG+ 
Sbjct: 157 MKLGWDLRIGLDRRLSAWKSPDDPSSGDFTWGTQLQSNPELVIWKGSEKYFRSGPWNGIG 216

Query: 61  FSA-SSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTL-YLVQRFTWNKATQS 118
           FS  ++LR NPVF F FV N  E+YY +++++K+   R+VMNQT  +L QR+TWN+ +Q+
Sbjct: 217 FSGEAALRINPVFYFDFVDNGEEVYYTYNLKNKSLITRLVMNQTTGFLRQRYTWNEISQT 276

Query: 119 WELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDKS 175
           WELY+ VPRD CD Y LCGAYG CIIS  PVC+CL+ F PKS      ++WSQGC R+K 
Sbjct: 277 WELYAYVPRDYCDNYNLCGAYGNCIISQSPVCECLEKFTPKSPESWNSMNWSQGCVRNKP 336

Query: 176 LNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCA 235
           L+  + DGF+K+  +KLPDAT SWV+K+MNL ECR KCL N SCMAYT +DI+ E SGCA
Sbjct: 337 LDCQKGDGFVKYVGLKLPDATNSWVNKTMNLKECRSKCLQNCSCMAYTATDIK-ERSGCA 395

Query: 236 MWFGELIDMRDFPDGGQDLYIRMSASE 262
           +WFG+LID+R FPDGGQ++YIRM+ASE
Sbjct: 396 IWFGDLIDIRQFPDGGQEIYIRMNASE 422

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224151394|ref|XP_002337099.1| predicted protein [Populus trichocarpa] gi|222838019|gb|EEE76384.1| predicted protein [Populus trichocarpa]

 Score =  350 bits (898), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 164/278 (58%), Positives = 210/278 (75%), Gaps = 6/278 (2%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK GWDL+ GLDRR+++WKSPDDPS G+F W  + Q NPEL+MWKGS+K++RSGPWNG+ 
Sbjct: 163 MKLGWDLRIGLDRRLSAWKSPDDPSSGDFTWGTQLQSNPELVMWKGSKKYYRSGPWNGIG 222

Query: 61  FSAS-SLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
           FS   +LR NPVF F FV +  E+YY +++++K+   RIVMNQT Y  QR+TWN+  Q+W
Sbjct: 223 FSGGLALRINPVFYFDFVDDGEEVYYTYNLKNKSLITRIVMNQTTYFRQRYTWNEINQTW 282

Query: 120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDKSL 176
            LY+ VPRD CDTY LCGAYG CI+S  PVCQCL+ F P+S      +DWS+GC R+K L
Sbjct: 283 VLYATVPRDYCDTYNLCGAYGNCIMSQSPVCQCLEKFTPRSPESWNSMDWSKGCVRNKPL 342

Query: 177 NYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAM 236
           +  + DGF+K+  +KLPDAT SWV+K+MNL ECR KCL N SCMAYT ++I+ E SGCA+
Sbjct: 343 DCQKGDGFVKYVGLKLPDATNSWVNKTMNLKECRSKCLQNCSCMAYTATNIK-ERSGCAV 401

Query: 237 WFGELIDMRDFPDGGQDLYIRMSASEIGT-RKLVYVTP 273
           WFG+LID+R FP  GQ++YIRM+ASE      LV V P
Sbjct: 402 WFGDLIDIRQFPAAGQEIYIRMNASESSECLSLVLVNP 439

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113149|ref|XP_002332642.1| predicted protein [Populus trichocarpa] gi|222832837|gb|EEE71314.1| predicted protein [Populus trichocarpa]

 Score =  348 bits (893), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 158/266 (59%), Positives = 205/266 (77%), Gaps = 5/266 (1%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK GWDL+ GLDRR+++WKSPDDPS G+F W  + Q NPEL+MWKGS++++RSGPWNG+ 
Sbjct: 157 MKLGWDLRIGLDRRLSAWKSPDDPSSGDFTWGTQLQSNPELVMWKGSKEYYRSGPWNGIG 216

Query: 61  FSAS-SLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
           FS    LR NPVF F FV +  E+YY +++++K+   RIVMNQ+ Y  QR+TWN+  Q+W
Sbjct: 217 FSGGPELRINPVFYFDFVDDGEEVYYTYNLKNKSLITRIVMNQSTYFRQRYTWNEINQTW 276

Query: 120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDKSL 176
            LY+NVPRD CDTY+LCGAYG CIIS  PVC+CL+ F PKS      +DWSQGC R+K L
Sbjct: 277 VLYANVPRDYCDTYSLCGAYGNCIISQSPVCECLEKFTPKSPESWNSMDWSQGCVRNKPL 336

Query: 177 NYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAM 236
           +  + DGF+K+  +KLPDAT SWV+K+MNL ECR  CL+N SCMAYT ++I+ E SGCA+
Sbjct: 337 DCQKGDGFVKYVGLKLPDATNSWVNKTMNLKECRSICLENCSCMAYTATNIK-ERSGCAI 395

Query: 237 WFGELIDMRDFPDGGQDLYIRMSASE 262
           WFG+LID+   P  GQ++YIRM+ASE
Sbjct: 396 WFGDLIDITQLPAAGQEIYIRMNASE 421

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124250|ref|XP_002319283.1| predicted protein [Populus trichocarpa] gi|222857659|gb|EEE95206.1| predicted protein [Populus trichocarpa]

 Score =  347 bits (891), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 158/266 (59%), Positives = 205/266 (77%), Gaps = 5/266 (1%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK GWDL+ GLDRR+++WKSPDDPS G+F W  + Q NPEL+MWKGS+K++RSGPWNG+ 
Sbjct: 163 MKLGWDLRIGLDRRLSAWKSPDDPSSGDFTWGTQLQSNPELVMWKGSKKYYRSGPWNGIG 222

Query: 61  FSAS-SLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
           FS   +LR NPVF F FV +  E+YY +++++K+   RIVMNQT Y  QR+TWN+  Q+W
Sbjct: 223 FSGGLALRINPVFYFDFVDDGEEVYYTYNLKNKSLITRIVMNQTTYFRQRYTWNEINQTW 282

Query: 120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDKSL 176
            LY+ VPRD CDTY LCGAYG CI+S  PVCQCL+ F P+S      +DWS+GC R+K L
Sbjct: 283 VLYATVPRDYCDTYNLCGAYGNCIMSQSPVCQCLEKFTPRSPESWNSMDWSKGCVRNKPL 342

Query: 177 NYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAM 236
           +  + DGF+K+  +KLPDAT SWV+K+MNL ECR KCL N SCMAYT ++I+ E SGCA+
Sbjct: 343 DCQKGDGFVKYVGLKLPDATNSWVNKTMNLKECRSKCLQNCSCMAYTATNIK-ERSGCAV 401

Query: 237 WFGELIDMRDFPDGGQDLYIRMSASE 262
           WFG+LID+R F   GQ++YIR++ASE
Sbjct: 402 WFGDLIDIRQFSAAGQEIYIRLNASE 427

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113157|ref|XP_002332644.1| predicted protein [Populus trichocarpa] gi|222832839|gb|EEE71316.1| predicted protein [Populus trichocarpa]

 Score =  347 bits (889), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 156/266 (58%), Positives = 207/266 (77%), Gaps = 4/266 (1%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK GWDL+TGL+RR++SW+S DDPSPG+  W ++ Q+NPE I+W+GS+++ RSGPW G+ 
Sbjct: 168 MKLGWDLRTGLERRLSSWRSSDDPSPGDLTWGIKLQNNPETIIWRGSQQYFRSGPWTGIA 227

Query: 61  FS-ASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
           F+ A  L  NPVF   FVS+E E+Y  +++++ +AF RIV+NQT    + +TWN+ATQ+W
Sbjct: 228 FTGAPELVQNPVFKLNFVSSEDEVYLSYNLKNISAFSRIVVNQTTNYREAYTWNEATQTW 287

Query: 120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDKSL 176
            LY++VPRD CD YA CGA G CII+D+P+C+CLK FKPKS      +DWS GC R+K L
Sbjct: 288 VLYASVPRDSCDNYASCGANGNCIINDLPICRCLKKFKPKSPEKWNLMDWSDGCVRNKPL 347

Query: 177 NYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAM 236
           N  + DGF+K+  +K PDAT SW++KSMNLNECR KCL N SCMAY+NSD+RG GSGC +
Sbjct: 348 NCQKGDGFVKYLGLKWPDATHSWLNKSMNLNECRAKCLQNCSCMAYSNSDVRGGGSGCII 407

Query: 237 WFGELIDMRDFPDGGQDLYIRMSASE 262
           W+G+LID+R FP GGQ+LYIRM+ SE
Sbjct: 408 WYGDLIDIRQFPAGGQELYIRMNPSE 433

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113153|ref|XP_002332643.1| predicted protein [Populus trichocarpa] gi|222832838|gb|EEE71315.1| predicted protein [Populus trichocarpa]

 Score =  346 bits (887), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 156/266 (58%), Positives = 206/266 (77%), Gaps = 4/266 (1%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK GWDL+TGL+RR++SW+S DDPSPG+  W ++ Q+NPE I+W+GS+++ RSGPW G+ 
Sbjct: 168 MKLGWDLRTGLERRLSSWRSSDDPSPGDLTWGIKLQNNPETIIWRGSQQYFRSGPWTGIA 227

Query: 61  FS-ASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
           F+ A  L  NPVF   FVS+E E+Y  +++++ +AF RIV+NQT    + +TWN+ATQ+W
Sbjct: 228 FTGAPELVQNPVFKLNFVSSEDEVYLSYNLKNISAFSRIVVNQTTNYREAYTWNEATQTW 287

Query: 120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDKSL 176
            LY++VPRD CD YA CGA G CII+D+P+C+CLK FKPKS      +DWS GC R+K L
Sbjct: 288 VLYASVPRDSCDNYASCGANGNCIINDLPICRCLKKFKPKSPEKWNLMDWSDGCVRNKPL 347

Query: 177 NYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAM 236
           N  + DGF+K+  +K PDAT SW++KSMNLNECR KCL N SCMAY+NSD+RG GSGC +
Sbjct: 348 NCQKGDGFVKYLGLKWPDATHSWLNKSMNLNECRAKCLQNCSCMAYSNSDVRGGGSGCII 407

Query: 237 WFGELIDMRDFPDGGQDLYIRMSASE 262
           W+G LID+R FP GGQ+LYIRM+ SE
Sbjct: 408 WYGGLIDIRQFPAGGQELYIRMNPSE 433

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115136|ref|XP_002316951.1| predicted protein [Populus trichocarpa] gi|222860016|gb|EEE97563.1| predicted protein [Populus trichocarpa]

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 160/272 (58%), Positives = 203/272 (74%), Gaps = 5/272 (1%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK GWDL+ G D R++SWKS DDPSPG+F   +ER+ NPE++ WKGS+K +RSGPWNG+ 
Sbjct: 158 MKIGWDLRAGFDWRLSSWKSSDDPSPGDFTMGIERESNPEVVAWKGSKKHYRSGPWNGVG 217

Query: 61  FSASS-LRPNPVFNFGFVSNEVELYYKFDMRDKA-AFQRIVMNQTLYLVQRFTWNKATQS 118
           FS S+ ++PNPVF F FVSN +E+YY F+++ ++    R+V+N T    Q +TWN+ TQ+
Sbjct: 218 FSGSTEVKPNPVFYFTFVSNNIEVYYIFNLKSESTVITRLVLNHTTSDRQCYTWNEETQT 277

Query: 119 WELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDKS 175
           W L  +VPRD CD Y LCGA   CI + +PVCQCL+ FKPKS      +DWSQGC R+K 
Sbjct: 278 WVLQVSVPRDHCDNYGLCGANANCIFNAIPVCQCLEKFKPKSPEEWNKMDWSQGCVRNKE 337

Query: 176 LNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCA 235
           L+  + DGFIKF  +KLPDAT SWV+K MNL EC+ KCL N SCMAY+N DIRG GSGCA
Sbjct: 338 LDCQKGDGFIKFDGLKLPDATHSWVNKDMNLKECKAKCLGNCSCMAYSNLDIRGGGSGCA 397

Query: 236 MWFGELIDMRDFPDGGQDLYIRMSASEIGTRK 267
            WFG+L+D+R  P GGQ+LYIRM ASEIG R+
Sbjct: 398 NWFGDLMDIRLVPGGGQELYIRMHASEIGDRE 429

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122938|ref|XP_002330401.1| predicted protein [Populus trichocarpa] gi|222871786|gb|EEF08917.1| predicted protein [Populus trichocarpa]

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 150/247 (60%), Positives = 191/247 (77%), Gaps = 5/247 (2%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MK GW L+TGLDRR+++WK PDDPSPG+F W  + Q NPEL+MWKGS+K+ RSGPWNG+ 
Sbjct: 126 MKLGWGLRTGLDRRLSAWKGPDDPSPGDFTWGTQLQGNPELVMWKGSKKYCRSGPWNGIG 185

Query: 61  FS-ASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
           FS A  LR NPVFNF FV +  E+YY +++++K  F R+VMNQT Y+ QR+TWN+  Q+W
Sbjct: 186 FSGAPELRKNPVFNFDFVDDGEEVYYTYNLKNKYVFTRVVMNQTTYIRQRYTWNEINQTW 245

Query: 120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDKSL 176
            LY+ VP+D CDTY LCGAYG CI S  PVC+CL+ F PKS      +DWSQGC R+K L
Sbjct: 246 VLYATVPKDYCDTYNLCGAYGNCITSQSPVCECLEKFTPKSPESWNSMDWSQGCVRNKPL 305

Query: 177 NYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAM 236
           +  ++DGF+ +  +KLPDAT SWV+K+MNL ECR +CL N SCMAYT +DI+ EGSGCA+
Sbjct: 306 DCQKEDGFVIYVGLKLPDATNSWVNKTMNLKECRSECLQNCSCMAYTAADIK-EGSGCAI 364

Query: 237 WFGELID 243
           WFG+LID
Sbjct: 365 WFGDLID 371

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546914|ref|XP_003541865.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max]

 Score =  323 bits (829), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 146/269 (54%), Positives = 200/269 (74%), Gaps = 6/269 (2%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MKFGWDL+TGL+R++ +WKSPDDPSP +F + +   + PE  M KG +KF+RSGPWNGL 
Sbjct: 167 MKFGWDLRTGLNRKLIAWKSPDDPSPSDFSFGMVLNNYPEAYMMKGDQKFYRSGPWNGLH 226

Query: 61  FSAS-SLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
            S S  ++ NP+++F FVSN+ ELYY + +++ +   R+V+N T Y+ +R+ W ++ Q W
Sbjct: 227 SSGSPQVKANPIYDFKFVSNKDELYYTYSLKNSSMISRLVLNATSYVRKRYVWIESKQRW 286

Query: 120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPK---SRGYVDWSQGCERDKSL 176
           E+Y++VP DLCD+Y+LCGA   C+ISD PVCQCL+GFKPK   +   +DWS GC R+K L
Sbjct: 287 EVYTSVPLDLCDSYSLCGANANCVISDSPVCQCLQGFKPKLPEAWSSMDWSHGCIRNKEL 346

Query: 177 N--YSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGC 234
           +     +DGF K T +K PD T SW+ +++ L EC+ KCLDN SCMAY NSDI G+GSGC
Sbjct: 347 SCENKNKDGFNKLTLLKTPDTTHSWLDQTIGLEECKAKCLDNCSCMAYANSDISGQGSGC 406

Query: 235 AMWFGELIDMRDFPDGGQDLYIRMSASEI 263
           AMWFG+LID+R F  GGQD+Y+R+ ASE+
Sbjct: 407 AMWFGDLIDIRQFAAGGQDVYVRIDASEL 435

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514931|ref|XP_003526155.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max]

 Score =  300 bits (769), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 147/273 (53%), Positives = 184/273 (67%), Gaps = 7/273 (2%)

Query: 1   MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
           MKFG DL+TGL+RR T+WKSP+DPSPG+    ++  + PE  M KG +K  R GPWNGL 
Sbjct: 169 MKFGRDLRTGLERRYTAWKSPEDPSPGDVYGVLKPYNYPEFYMMKGEKKLLRQGPWNGLY 228

Query: 61  FSA-SSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
           FS    L+ N +F   FVSN+ E+YY F +   +     V+NQT     R+ W +  Q+W
Sbjct: 229 FSGFPDLQNNTIFGINFVSNKDEIYYTFSLVKSSVVTINVINQT-GRTYRYVWVEGDQNW 287

Query: 120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDKSL 176
            +Y + P+D CDTY LCGAYG C+IS   VCQCLKGF PKS       DW+QGC R+  L
Sbjct: 288 RIYISQPKDFCDTYGLCGAYGSCMISQTQVCQCLKGFSPKSPQAWASSDWTQGCVRNNPL 347

Query: 177 --NYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGC 234
             +   +DGF+KF   K+PD+T +WV +S+ L ECR KCL N SCMAYTNSDIRGEGSGC
Sbjct: 348 SCHGEDKDGFVKFEGFKVPDSTHTWVDESIGLEECRVKCLSNCSCMAYTNSDIRGEGSGC 407

Query: 235 AMWFGELIDMRDFPDGGQDLYIRMSASEIGTRK 267
            MWFG+LIDM+    GGQDLYIRM ASE+  +K
Sbjct: 408 VMWFGDLIDMKQLQTGGQDLYIRMPASELEHKK 440

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	274
TAIR|locus:2131684	783	AT4G27290 [Arabidopsis thalian	0.963	0.337	0.444	4.1e-65
TAIR|locus:2141181	850	RK3 "receptor kinase 3" [Arabi	0.970	0.312	0.428	1.8e-64
TAIR|locus:2018546	843	RK1 "receptor kinase 1" [Arabi	0.970	0.315	0.395	2.1e-57
TAIR|locus:2018506	847	RK2 "receptor kinase 2" [Arabi	0.974	0.315	0.386	1.5e-53
TAIR|locus:2131694	815	AT4G27300 [Arabidopsis thalian	0.948	0.319	0.408	3e-52
TAIR|locus:2088619	439	AT3G12000 [Arabidopsis thalian	0.864	0.539	0.368	1.7e-41
TAIR|locus:2059103	828	AT2G19130 [Arabidopsis thalian	0.930	0.307	0.341	2.8e-37
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.908	0.293	0.329	2e-35
TAIR|locus:2200151	830	SD1-13 "S-domain-1 13" [Arabid	0.912	0.301	0.349	3.1e-35
TAIR|locus:2197729	805	SD1-29 "S-domain-1 29" [Arabid	0.952	0.324	0.326	3.2e-33

TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]

 Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
 Identities = 120/270 (44%), Positives = 178/270 (65%)

Query:     1 MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
             MK+G +  TGL+R +TSW++ DDPS GN+   ++    P+  + K S    R+GPWNGLR
Sbjct:   162 MKYGLNFVTGLNRFLTSWRAIDDPSTGNYTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLR 221

Query:    61 FSAS-SLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
             F+   +L+PNP++ + +V  E E+YY + + + +   R+ +N    L QR+TW    QSW
Sbjct:   222 FTGMPNLKPNPIYRYEYVFTEEEVYYTYKLENPSVLTRMQLNPNGAL-QRYTWVDNLQSW 280

Query:   120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKS-RGYV--DWSQGCERDKSL 176
               Y +   D CD Y LCG+YG C I++ P C+CLKGF  K+ + +V  DWS+GC R   L
Sbjct:   281 NFYLSAMMDSCDQYTLCGSYGSCNINESPACRCLKGFVAKTPQAWVAGDWSEGCVRRVKL 340

Query:   177 NYSR-QDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCA 235
             +  + +DGF+K + +KLPD   SW  K+M+LNEC++ CL N +C AY+  DIR  G GC 
Sbjct:   341 DCGKGEDGFLKISKLKLPDTRTSWYDKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCI 400

Query:   236 MWFGELIDMRDFPDGGQDLYIRMSASEIGT 265
             +WFG+LID+R++ + GQDLY+R+++SEI T
Sbjct:   401 LWFGDLIDIREYNENGQDLYVRLASSEIET 430

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
 Identities = 116/271 (42%), Positives = 170/271 (62%)

Query:     1 MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
             MK GWD KTG +R I SWKSPDDPS G+F + +E +  PE+ +W    + +RSGPWNG+R
Sbjct:   167 MKLGWDAKTGFNRFIRSWKSPDDPSSGDFSFKLETEGFPEIFLWNRESRMYRSGPWNGIR 226

Query:    61 FSA-SSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSW 119
             FS    ++P     F F +++ E+ Y F +     + R+ ++ +  L+QRFTW +  Q+W
Sbjct:   227 FSGVPEMQPFEYMVFNFTTSKEEVTYSFRITKSDVYSRLSISSS-GLLQRFTWIETAQNW 285

Query:   120 ELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDKSL 176
               +   P+D CD Y  CG YG C  +  PVC C+KGFKP++    G  D S GC R   L
Sbjct:   286 NQFWYAPKDQCDEYKECGVYGYCDSNTSPVCNCIKGFKPRNPQVWGLRDGSDGCVRKTLL 345

Query:   177 NYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAM 236
             +    DGF++   MKLPD T + V + + + EC +KCL + +C A+ N+DIRG GSGC  
Sbjct:   346 SCGGGDGFVRLKKMKLPDTTTASVDRGIGVKECEQKCLRDCNCTAFANTDIRGSGSGCVT 405

Query:   237 WFGELIDMRDFPDGGQDLYIRMSASEIGTRK 267
             W GEL D+R++  GGQDLY+R++A+++  ++
Sbjct:   406 WTGELFDIRNYAKGGQDLYVRLAATDLEDKR 436

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 591 (213.1 bits), Expect = 2.1e-57, P = 2.1e-57
 Identities = 108/273 (39%), Positives = 168/273 (61%)

Query:     1 MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
             MK GWD KTG +R + SWK+ DDPS G F   +E  + PE  +       +RSGPWNG+R
Sbjct:   161 MKLGWDQKTGFNRILRSWKTTDDPSSGEFSTKLETSEFPEFYICSKESILYRSGPWNGMR 220

Query:    61 FSA--SSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQS 118
             FS+   +++ + +  + F +++ E+ Y + +     + R+ +N    L+QR TW + TQS
Sbjct:   221 FSSVPGTIQVDYMV-YNFTASKEEVTYSYRINKTNLYSRLYLNSA-GLLQRLTWFETTQS 278

Query:   119 WELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDKS 175
             W+     P+DLCD Y +CG +G C  + +P C C+KGFKP +       D S GC R   
Sbjct:   279 WKQLWYSPKDLCDNYKVCGNFGYCDSNSLPNCYCIKGFKPVNEQAWDLRDGSAGCMRKTR 338

Query:   176 LNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCA 235
             L+   +DGF +   MKLPD T + V + + L  C+E+CL++ +C A+ N+DIR  GSGC 
Sbjct:   339 LSCDGRDGFTRLKRMKLPDTTATIVDREIGLKVCKERCLEDCNCTAFANADIRNGGSGCV 398

Query:   236 MWFGELIDMRDFPDGGQDLYIRMSASEIGTRKL 268
             +W  E++DMR++  GGQDLY+R++A+E+  +++
Sbjct:   399 IWTREILDMRNYAKGGQDLYVRLAAAELEDKRI 431

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009875 "pollen-pistil interaction" evidence=TAS

GO:0016020 "membrane" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 558 (201.5 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 105/272 (38%), Positives = 158/272 (58%)

Query:     1 MKFGWDLKTG-LDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGL 59
             MK GWD K+G  +R + SWK+ DDPS G+F   +     PE  ++      +RSGPW G 
Sbjct:   165 MKMGWDNKSGGFNRILRSWKTTDDPSSGDFSTKLRTSGFPEFYIYNKESITYRSGPWLGN 224

Query:    60 RFSA-SSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQS 118
             RFS+   ++P    +  F  N  ++ Y + +     +  + ++ T  L+QR TW +A QS
Sbjct:   225 RFSSVPGMKPVDYIDNSFTENNQQVVYSYRVNKTNIYSILSLSST-GLLQRLTWMEAAQS 283

Query:   119 WELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSRGYV--DWSQGCERDKSL 176
             W+     P+DLCD Y  CG YG C  +  P+C C+KGF+P +      D S GC R   L
Sbjct:   284 WKQLWYSPKDLCDNYKECGNYGYCDANTSPICNCIKGFEPMNEQAALRDDSVGCVRKTKL 343

Query:   177 NYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAM 236
             +   +DGF++   M+LPD T + V K + L EC E+CL   +C A+ N+DIR  GSGC +
Sbjct:   344 SCDGRDGFVRLKKMRLPDTTETSVDKGIGLKECEERCLKGCNCTAFANTDIRNGGSGCVI 403

Query:   237 WFGELIDMRDFPDGGQDLYIRMSASEIGTRKL 268
             W G L D+R++  GGQDLY+R++A ++  +++
Sbjct:   404 WSGGLFDIRNYAKGGQDLYVRVAAGDLEDKRI 435

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)]

 Score = 545 (196.9 bits), Expect = 3.0e-52, P = 3.0e-52
 Identities = 112/274 (40%), Positives = 165/274 (60%)

Query:     1 MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWK-GSRKF-HRSGPWNG 58
             MK G + KT ++  ++SWK+  DPSPG+F  +++ +  P+LI+ K G   + +R G WNG
Sbjct:   162 MKLGKNFKTQMEWSLSSWKTLKDPSPGDFTLSLDTRGLPQLILRKNGDSSYSYRLGSWNG 221

Query:    59 LRFSASSL--RPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKAT 116
             L F+ +    R N +F++ F S+  E+ Y +  R +    R+V+N T  L  RF  +K  
Sbjct:   222 LSFTGAPAMGRENSLFDYKFTSSAQEVNYSWTPRHRIV-SRLVLNNTGKL-HRFIQSKQN 279

Query:   117 QSWELYSNVPRDLCDTYALCGAYGICIIS--DMPVCQCLKGFKPKSRGYVDWSQG---CE 171
             Q W L +  P D CD Y++CGAY +C I+  + P C CL+GFKPKS    + S+G   C 
Sbjct:   280 Q-WILANTAPEDECDYYSICGAYAVCGINSKNTPSCSCLQGFKPKSGRKWNISRGAYGCV 338

Query:   172 RDKSLNYSRQDGFIKFTAMKLPDATLSW--VSKSMNLNECREKCLDNSSCMAYTNSDIRG 229
              +   N  ++D F+KF  +KLPD + SW      M L +C+ KC  N SC AY N+DIR 
Sbjct:   339 HEIPTNCEKKDAFVKFPGLKLPDTSWSWYDAKNEMTLEDCKIKCSSNCSCTAYANTDIRE 398

Query:   230 EGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEI 263
              G GC +WFG+L+DMR++   GQD+YIRM  ++I
Sbjct:   399 GGKGCLLWFGDLVDMREYSSFGQDVYIRMGFAKI 432

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2088619 AT3G12000 [Arabidopsis thaliana (taxid:3702)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 91/247 (36%), Positives = 131/247 (53%)

Query:     1 MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
             MK G DLKTG +  ++SW+SP DPS G+F + +  Q  PE  ++K     +RSGPWNG+ 
Sbjct:   173 MKIGRDLKTGHETFLSSWRSPYDPSSGDFSFKLGTQGLPEFYLFKKEFLLYRSGPWNGVG 232

Query:    61 FSASSLRPN----PVFNFGFVSNEVELYYKFDMRDKAA-FQRIVMNQTLYLVQRFTWNKA 115
             FS      N     V N  F+ N  E+ Y F + D +  + R  +  T  L+Q   W+  
Sbjct:   233 FSGIPTMQNWSYFDVVN-NFIENRGEVAYSFKVTDHSMHYVRFTLT-TERLLQISRWDTT 290

Query:   116 TQSWELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKS-RGYV--DWSQGCER 172
             +  W L+  +P + CD Y +CG    C     P C C+KGF PK+   +   D  +GC R
Sbjct:   291 SSEWNLFGVLPTEKCDLYQICGRDSYCDTKTSPTCNCIKGFVPKNVTAWALGDTFEGCVR 350

Query:   173 DKSLNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGS 232
                LN  R   F+    MKLP  + + V K++ LNEC+E+C  + +C  + N DI+  GS
Sbjct:   351 KSRLNCHRDGFFLLMKRMKLPGTSTAIVDKTIGLNECKERCSKDCNCTGFANKDIQNGGS 410

Query:   233 GCAMWFG 239
             GC +W G
Sbjct:   411 GCVIWTG 417

GO:0005886 "plasma membrane" evidence=ISM

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048441 "petal development" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)]

 Score = 409 (149.0 bits), Expect = 2.8e-37, P = 2.8e-37
 Identities = 94/275 (34%), Positives = 145/275 (52%)

Query:     1 MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
             +K   D +TG  +R+TSWKS +DPSPG F   ++ +     I+W GS ++  SGPWN   
Sbjct:   160 VKIRLDKRTGKSQRLTSWKSLEDPSPGLFSLELD-ESTAYKILWNGSNEYWSSGPWNPQS 218

Query:    61 --F-SASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQ 117
               F S   +R N ++NF F SN  + Y+ + + ++    R VM+ +  + Q FTW +  +
Sbjct:   219 RIFDSVPEMRLNYIYNFSFFSNTTDSYFTYSIYNQLNVSRFVMDVSGQIKQ-FTWLEGNK 277

Query:   118 SWELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDK 174
             +W L+ + PR  C  Y  CG++GIC     P C+C +GF+P S+      D+S GC R  
Sbjct:   278 AWNLFWSQPRQQCQVYRYCGSFGICSDKSEPFCRCPQGFRPMSQKDWDLKDYSAGCVRKT 337

Query:   175 SLNYSRQD--GFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGS 232
              L  SR D   F +   MKL D   S V    +L+ C   C  + SC AY       EGS
Sbjct:   338 ELQCSRGDINQFFRLPNMKLADN--SEVLTRTSLSICASACQGDCSCKAYAYD----EGS 391

Query:   233 G-CAMWFGELIDMRDFPDG---GQDLYIRMSASEI 263
               C +W  ++++++   D    G   Y+R++AS++
Sbjct:   392 SKCLVWSKDVLNLQQLEDENSEGNIFYLRLAASDV 426

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 392 (143.0 bits), Expect = 2.0e-35, P = 2.0e-35
 Identities = 91/276 (32%), Positives = 145/276 (52%)

Query:     8 KTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGS--RKFHRSGPWNGLRFSA-- 63
             +TG +    SW+S  DPSPGN+   V+    PE+++W+G+  RK+ RSG WN   F+   
Sbjct:   171 QTGDNHAFVSWRSETDPSPGNYSLGVDPSGAPEIVLWEGNKTRKW-RSGQWNSAIFTGIP 229

Query:    64 -SSLRPNPVFNFGFVSNEVE---LYYKFDMRDKAAFQR--IVMNQTLYLVQRFTWNKATQ 117
               SL  N ++ F   S   E   +Y+ +   D +   R  ++ N T    +   WN+  +
Sbjct:   230 NMSLLTNYLYGFKLSSPPDETGSVYFTYVPSDPSVLLRFKVLYNGT---EEELRWNETLK 286

Query:   118 SWELYSNVPRDLCDTYALCGAYGICIISDMP-VCQCLKGFKPKSRGYVDWSQGCERDKSL 176
              W  + + P   CD Y  CG +GIC +     +C C+ G++  S G  +WS+GC R   L
Sbjct:   287 KWTKFQSEPDSECDQYNRCGKFGICDMKGSNGICSCIHGYEQVSVG--NWSRGCRRRTPL 344

Query:   177 NYSR-----QDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEG 231
                R     +D F+   ++KLPD  +      ++  +CRE+CL N SC AY+   + G G
Sbjct:   345 KCERNISVGEDEFLTLKSVKLPDFEIP-EHNLVDPEDCRERCLRNCSCNAYS---LVG-G 399

Query:   232 SGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTRK 267
              GC +W  +L+D++ F  GG  L+IR++ SE+G  +
Sbjct:   400 IGCMIWNQDLVDLQQFEAGGSSLHIRLADSEVGENR 435

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 390 (142.3 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 101/289 (34%), Positives = 132/289 (45%)

Query:     1 MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLR 60
             M    D KTG   ++ SWKSP DPSPG +   +     PEL++WK      RSGPWNG  
Sbjct:   158 MSLATDTKTGRSLKLRSWKSPFDPSPGRYSAGLIPLPFPELVVWKDDLLMWRSGPWNGQY 217

Query:    61 FSASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLY---------LVQRFT 111
             F      PN  +      N  EL    D R   +      N  LY         + QR  
Sbjct:   218 FIGL---PNMDYRI----NLFELTLSSDNRGSVSMS-YAGNTLLYHFLLDSEGSVFQR-D 268

Query:   112 WNKATQSWELYSNVPRDLCDTYALCGAYGICIIS--DMPVCQCLKGFKPKSRGYVD---W 166
             WN A Q W+ +  VP   CDTYA CG +  C  +    P C C++GFKP+S    +   W
Sbjct:   269 WNVAIQEWKTWLKVPSTKCDTYATCGQFASCRFNPGSTPPCMCIRGFKPQSYAEWNNGNW 328

Query:   167 SQGC---------ERDKSLNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNS 217
             +QGC          RD +    + DGF++   MK+P           N  +C E CL N 
Sbjct:   329 TQGCVRKAPLQCESRDNNDGSRKSDGFVRVQKMKVPHNPQR---SGANEQDCPESCLKNC 385

Query:   218 SCMAYTNSDIRGEGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEIGTR 266
             SC AY+       G GC +W G L+DM++F   G   YIR++ SE   R
Sbjct:   386 SCTAYSFD----RGIGCLLWSGNLMDMQEFSGTGVVFYIRLADSEFKKR 430

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

GO:0009637 "response to blue light" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2197729 SD1-29 "S-domain-1 29" [Arabidopsis thaliana (taxid:3702)]

 Score = 371 (135.7 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 93/285 (32%), Positives = 139/285 (48%)

Query:     5 WDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSA- 63
             +D   G  R +T+WKS  DPSPG F   +  Q   + ++ +GS  + R GPW   RFS  
Sbjct:   156 YDTSNGKKRVLTTWKSNSDPSPGEFSLEITPQIPTQGLIRRGSVPYWRCGPWAKTRFSGI 215

Query:    64 SSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSWELYS 123
             S +  + V  F  V +       F       +    +  T     +  W+    +W+L+ 
Sbjct:   216 SGIDASYVSPFSVVQDTAAGTGSFSYSTLRNYNLSYVTLTPEGKMKILWDDGN-NWKLHL 274

Query:   124 NVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKSR---GYVDWSQGCERDKSLNYSR 180
             ++P + CD Y  CG YG+C+ SD P C+CLKGF PKS    G  +W+ GC R   L+   
Sbjct:   275 SLPENPCDLYGRCGPYGLCVRSDPPKCECLKGFVPKSDEEWGKGNWTSGCVRRTKLSCQA 334

Query:   181 Q----------DGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGE 230
             +          D F + T +K PD  L   +  +N  +C + CL N SC A+        
Sbjct:   335 KSSMKTQGKDTDIFYRMTDVKTPD--LHQFASFLNAEQCYQGCLGNCSCTAFAYIS---- 388

Query:   231 GSGCAMWFGELIDMRDFPDGGQDLYIRMSASEI-GT--RKLVYVT 272
             G GC +W GEL D   F   G+ L+IR+++SE+ G+  RK++  T
Sbjct:   389 GIGCLVWNGELADTVQFLSSGEFLFIRLASSELAGSSRRKIIVGT 433

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.XIII.2650.1 hypothetical protein (833 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	274
pfam00954	110	pfam00954, S_locus_glycop, S-locus glycoprotein fa	1e-37
pfam08276	66	pfam08276, PAN_2, PAN-like domain	5e-24
cd01098	84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	3e-22
smart00473	78	smart00473, PAN_AP, divergent subfamily of APPLE d	2e-12

>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family

 Score =  128 bits (324), Expect = 1e-37
 Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 2/111 (1%)

Query: 51  HRSGPWNGLRFSASS-LRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQR 109
            RSGPWNG+RFS    ++    + + F  N  E+YY + M + + + R+ ++    L +R
Sbjct: 1   WRSGPWNGIRFSGIPEMQKLSYYVYNFTENNEEVYYTYRMTNNSIYSRLTLSSEGSL-ER 59

Query: 110 FTWNKATQSWELYSNVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKS 160
           FTW   +Q W L+ + P+D CD Y  CG YG C ++  P C C+KGF PK+
Sbjct: 60  FTWIPNSQDWNLFWSAPKDQCDVYGRCGPYGYCDVNTSPKCNCIKGFVPKN 110

In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. Length = 110

>gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain

 Score = 91.6 bits (228), Expect = 5e-24
 Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 180 RQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFG 239
             DGF++   MKLPD T + V +S+ L EC ++CL N SC AY  +DIRG GSGC +W G
Sbjct: 3   GGDGFLRLPNMKLPDTTAAIVDRSIGLKECEQRCLSNCSCTAYAYADIRG-GSGCLIWTG 61

Query: 240 ELIDM 244
           EL+DM
Sbjct: 62  ELVDM 66

Length = 66

>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

 Score = 87.5 bits (217), Expect = 3e-22
 Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 10/88 (11%)

Query: 170 CERDKSLNYSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRG 229
           C  D S      DGF+K   +KLPD   +    +++L ECRE CL N SC AY  ++   
Sbjct: 5   CGGDGS-----TDGFLKLPDVKLPD--NASAITAISLEECREACLSNCSCTAYAYNNG-- 55

Query: 230 EGSGCAMWFGELIDMRDFPDGGQDLYIR 257
              GC +W G L ++R    GG  LY+R
Sbjct: 56  -SGGCLLWNGLLNNLRSLSSGGGTLYLR 82

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84

>gnl|CDD|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains

 Score = 61.4 bits (149), Expect = 2e-12
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 179 SRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLD-NSSCMAYTNSDIRGEGSGCAMW 237
              D F++    KLP  +   +S   +L EC  KCL+ N SC ++T ++      GC +W
Sbjct: 1   KSDDCFVRLPNTKLPGFSRIVIS-VASLEECASKCLNSNCSCRSFTYNN---GTKGCLLW 56

Query: 238 -FGELIDMRDFPDGGQDLYIR 257
               L D R FP GG DLY +
Sbjct: 57  SESSLGDARLFPSGGVDLYEK 77

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions. Length = 78

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	274
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	99.96
PF08276	66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.74
cd01098	84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.63
cd00129	80	PAN_APPLE PAN/APPLE-like domain; present in N-term	99.55
smart00473	78	PAN_AP divergent subfamily of APPLE domains. Apple	98.78
cd01100	73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	97.8
smart00223	79	APPLE APPLE domain. Four-fold repeat in plasma kal	95.82
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	95.75
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	95.19
PF00024	79	PAN_1: PAN domain This Prosite entry concerns appl	95.05
PF14295	51	PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A.	94.42
PF08277	71	PAN_3: PAN-like domain; InterPro: IPR006583 PAN do	90.7
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	90.54
smart00605	94	CW CW domain.	90.04
cd00053	36	EGF Epidermal growth factor domain, found in epide	87.21
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	86.93
PF01683	52	EB: EB module; InterPro: IPR006149 The EB domain h	85.32
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	83.37
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	82.67
cd01099	80	PAN_AP_HGF Subfamily of PAN/APPLE-like domains; pr	82.34

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=99.96  E-value=1.3e-29  Score=193.86  Aligned_cols=109  Identities=44%  Similarity=1.031  Sum_probs=101.5

Q ss_pred             EEcCCCCCceeecc-ccCCCCeeeEEEEecCceEEEEEEecCCCcEEEEEEeecCCeEEEEEEcCCCCceEEEEeecCCC
Q 023979           51 HRSGPWNGLRFSAS-SLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSWELYSNVPRDL  129 (274)
Q Consensus        51 w~sg~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~L~~dG~l~~~y~w~~~~~~W~~~~~~p~~~  129 (274)
                      ||+|+|+|..|+++ +|.....+.+.|+.++++.+++|.+.+.+.+.|++||++|++ +++.|.+..+.|.+.|.+|.|.
T Consensus         1 wrsG~WnG~~f~g~p~~~~~~~~~~~fv~~~~e~~~t~~~~~~s~~~r~~ld~~G~l-~~~~w~~~~~~W~~~~~~p~d~   79 (110)
T PF00954_consen    1 WRSGPWNGQRFSGIPEMSSNSLYNYSFVSNNEEVYYTYSLSNSSVLSRLVLDSDGQL-QRYIWNESTQSWSVFWSAPKDQ   79 (110)
T ss_pred             CCccccCCeEECCcccccccceeEEEEEECCCeEEEEEecCCCceEEEEEEeeeeEE-EEEEEecCCCcEEEEEEecccC
Confidence            89999999999998 777666788899999999999999888888999999999999 9999999999999999999999


Q ss_pred             CCCCCCCCCCcccccCCCCccccCCCceecC
Q 023979          130 CDTYALCGAYGICIISDMPVCQCLKGFKPKS  160 (274)
Q Consensus       130 C~~~~~CG~~g~C~~~~~~~C~C~~GF~~~~  160 (274)
                      ||+|+.||+||+|+.+..+.|+||+||+|++
T Consensus        80 Cd~y~~CG~~g~C~~~~~~~C~Cl~GF~P~n  110 (110)
T PF00954_consen   80 CDVYGFCGPNGICNSNNSPKCSCLPGFEPKN  110 (110)
T ss_pred             CCCccccCCccEeCCCCCCceECCCCcCCCc
Confidence            9999999999999887788999999999974

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=99.74  E-value=3.1e-18  Score=118.59  Aligned_cols=66  Identities=44%  Similarity=0.964  Sum_probs=56.0

Q ss_pred             cCCCCceEEEeeecCCCCccceeeccCChHHHHHHHhcCCceEEEEeccccCCCceeEeecccccee
Q 023979          178 YSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFGELIDM  244 (274)
Q Consensus       178 C~~~~~f~~l~~~~~p~~~~~~~~~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~g~~C~~w~~~l~~~  244 (274)
                      |+.+|+|++|++|++|++....+..++++++|+++||+||||+||+|.+.+ ++++|++|.++|+|+
T Consensus         1 C~~~d~F~~l~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~-~~~~C~lW~~~L~d~   66 (66)
T PF08276_consen    1 CGSGDGFLKLPNMKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNLS-GGGGCLLWYGDLVDL   66 (66)
T ss_pred             CcCCCEEEEECCeeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeeccC-CCCEEEEEcCEeecC
Confidence            444689999999999998776655668999999999999999999998543 456899999999874

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

Probab=99.63  E-value=1.2e-15  Score=110.38  Aligned_cols=80  Identities=41%  Similarity=0.895  Sum_probs=64.6

Q ss_pred             ccccCCC---CceEEEeeecCCCCccceeeccCChHHHHHHHhcCCceEEEEeccccCCCceeEeeccccceeEEcCCCC
Q 023979          175 SLNYSRQ---DGFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFGELIDMRDFPDGG  251 (274)
Q Consensus       175 ~l~C~~~---~~f~~l~~~~~p~~~~~~~~~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~g~~C~~w~~~l~~~~~~~~~~  251 (274)
                      +++|.+.   +.|++++++++|+.....  ..+++++|++.||+||+|+||+|.+   ++++|++|..++.+.+.....+
T Consensus         2 ~~~C~~~~~~~~f~~~~~~~~~~~~~~~--~~~s~~~C~~~Cl~nCsC~a~~~~~---~~~~C~~~~~~~~~~~~~~~~~   76 (84)
T cd01098           2 PLNCGGDGSTDGFLKLPDVKLPDNASAI--TAISLEECREACLSNCSCTAYAYNN---GSGGCLLWNGLLNNLRSLSSGG   76 (84)
T ss_pred             CcccCCCCCCCEEEEeCCeeCCCchhhh--ccCCHHHHHHHHhcCCCcceeeecC---CCCeEEEEeceecceEeecCCC
Confidence            4567543   589999999999876543  5678999999999999999999974   2457999999999877655456


Q ss_pred             ceEEEEee
Q 023979          252 QDLYIRMS  259 (274)
Q Consensus       252 ~~~yikv~  259 (274)
                      .++||||+
T Consensus        77 ~~~yiKv~   84 (84)
T cd01098          77 GTLYLRLA   84 (84)
T ss_pred             cEEEEEeC
Confidence            89999985

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

Probab=99.55  E-value=6.9e-15  Score=105.25  Aligned_cols=72  Identities=19%  Similarity=0.267  Sum_probs=60.2

Q ss_pred             cCCCCceEEEeeecCCCCccceeeccCChHHHHHHHhc---CCceEEEEeccccCCCceeEeecccc-ceeEEcCCCCce
Q 023979          178 YSRQDGFIKFTAMKLPDATLSWVSKSMNLNECREKCLD---NSSCMAYTNSDIRGEGSGCAMWFGEL-IDMRDFPDGGQD  253 (274)
Q Consensus       178 C~~~~~f~~l~~~~~p~~~~~~~~~~~~~~~C~~~Cl~---nCsC~a~~~~~~~~~g~~C~~w~~~l-~~~~~~~~~~~~  253 (274)
                      |..+..|+++.+|++|++..      +++++|+++|++   ||||+||+|.+.   +.+|++|.++| .+++.....|.+
T Consensus         5 ~~~~g~fl~~~~~klpd~~~------~s~~eC~~~Cl~~~~nCsC~Aya~~~~---~~gC~~W~~~l~~d~~~~~~~g~~   75 (80)
T cd00129           5 CKSAGTTLIKIALKIKTTKA------NTADECANRCEKNGLPFSCKAFVFAKA---RKQCLWFPFNSMSGVRKEFSHGFD   75 (80)
T ss_pred             eecCCeEEEeecccCCcccc------cCHHHHHHHHhcCCCCCCceeeeccCC---CCCeEEecCcchhhHHhccCCCce
Confidence            33456799999999998644      478999999999   999999999742   45899999999 998877677899


Q ss_pred             EEEEe
Q 023979          254 LYIRM  258 (274)
Q Consensus       254 ~yikv  258 (274)
                      +|||.
T Consensus        76 Ly~r~   80 (80)
T cd00129          76 LYENK   80 (80)
T ss_pred             eEeEC
Confidence            99983

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>smart00473 PAN_AP divergent subfamily of APPLE domains

Probab=98.78  E-value=3.6e-08  Score=69.60  Aligned_cols=72  Identities=39%  Similarity=0.768  Sum_probs=55.5

Q ss_pred             CceEEEeeecCCCCccceeeccCChHHHHHHHhc-CCceEEEEeccccCCCceeEeec-cccceeEEcCCCCceEEEE
Q 023979          182 DGFIKFTAMKLPDATLSWVSKSMNLNECREKCLD-NSSCMAYTNSDIRGEGSGCAMWF-GELIDMRDFPDGGQDLYIR  257 (274)
Q Consensus       182 ~~f~~l~~~~~p~~~~~~~~~~~~~~~C~~~Cl~-nCsC~a~~~~~~~~~g~~C~~w~-~~l~~~~~~~~~~~~~yik  257 (274)
                      ..|..++++.+++..... ....++++|++.|++ +|+|.||.|..   .+.+|++|. +++.+.......+.++|.|
T Consensus         4 ~~f~~~~~~~l~~~~~~~-~~~~s~~~C~~~C~~~~~~C~s~~y~~---~~~~C~l~~~~~~~~~~~~~~~~~~~y~~   77 (78)
T smart00473        4 DCFVRLPNTKLPGFSRIV-ISVASLEECASKCLNSNCSCRSFTYNN---GTKGCLLWSESSLGDARLFPSGGVDLYEK   77 (78)
T ss_pred             ceeEEecCccCCCCccee-EcCCCHHHHHHHhCCCCCceEEEEEcC---CCCEEEEeeCCccccceecccCCceeEEe
Confidence            468889999988654432 346689999999999 99999999973   245799999 7788776555556677776

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins

Probab=97.80  E-value=3e-05  Score=54.43  Aligned_cols=50  Identities=20%  Similarity=0.429  Sum_probs=36.4

Q ss_pred             EeeecCCCCccceeeccCChHHHHHHHhcCCceEEEEeccccCCCceeEeeccc
Q 023979          187 FTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFGE  240 (274)
Q Consensus       187 l~~~~~p~~~~~~~~~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~g~~C~~w~~~  240 (274)
                      +++++++..+.... ...+.++|++.|+.+++|.||+|..   ....|+++...
T Consensus         9 ~~~~~~~g~d~~~~-~~~s~~~Cq~~C~~~~~C~afT~~~---~~~~C~lk~~~   58 (73)
T cd01100           9 GSNVDFRGGDLSTV-FASSAEQCQAACTADPGCLAFTYNT---KSKKCFLKSSE   58 (73)
T ss_pred             cCCCccccCCccee-ecCCHHHHHHHcCCCCCceEEEEEC---CCCeEEcccCC
Confidence            35666665544433 2457899999999999999999973   23469997654

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>smart00223 APPLE APPLE domain

Probab=95.82  E-value=0.018  Score=41.00  Aligned_cols=52  Identities=13%  Similarity=0.341  Sum_probs=37.4

Q ss_pred             EeeecCCCCccceeeccCChHHHHHHHhcCCceEEEEeccccCCCceeEeecc
Q 023979          187 FTAMKLPDATLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFG  239 (274)
Q Consensus       187 l~~~~~p~~~~~~~~~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~g~~C~~w~~  239 (274)
                      +++++++..+.... ...+.++|++.|..+=.|.||+|.........|+++..
T Consensus         6 ~~~~df~G~Dl~~~-~~~~~~~Cq~~Ct~~~~C~~FTf~~~~~~~~~C~LK~s   57 (79)
T smart00223        6 YKNVDFRGSDINTV-YVPSAQVCQKRCTSHPRCLFFTFSTNEPPEEKCLLKDS   57 (79)
T ss_pred             ccCccccCceeeee-ecCCHHHHHHhhcCCCCccEEEeeCCCCCCCEeEeCcC
Confidence            45667766655543 34578999999999999999999753222227999754

Four-fold repeat in plasma kallikrein and coagulation factor XI. Factor XI apple 3 mediates binding to platelets. Factor XI apple 1 binds high-molecular-mass kininogen. Apple 4 in factor XI mediates dimer formation and binds to factor XIIa. Mutations in apple 4 cause factor XI deficiency, an inherited bleeding disorder.

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=95.75  E-value=0.054  Score=41.12  Aligned_cols=93  Identities=13%  Similarity=0.093  Sum_probs=49.4

Q ss_pred             ceEEEEecCCCCCCCeeEEEEEecCCCcEEEEEcCC--eeEEEcCCCCCceeecc-ccCCCCeeeEEEEecCceEEEEEE
Q 023979           12 DRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGS--RKFHRSGPWNGLRFSAS-SLRPNPVFNFGFVSNEVELYYKFD   88 (274)
Q Consensus        12 ~~~L~Sw~s~~dps~G~y~l~~~~~g~~~l~~~~~~--~~Yw~sg~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   88 (274)
                      ++.|+|-.  ...+-|.|++.++.++++  ++++..  .++|.+.......-... .+...+.+  .+.+.++.....-.
T Consensus         7 ~~~l~s~~--~~f~~G~~~~~~q~dgnl--V~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnL--vl~~~~g~~vW~S~   80 (114)
T smart00108        7 GQTLVSGN--SLFELGFFTLIMQNDYNL--ILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNL--VLYDGDGRVVWSSN   80 (114)
T ss_pred             CCEEecCC--CcEeeeccccCCCCCEEE--EEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCE--EEEeCCCCEEEEec
Confidence            35566643  333789999999988774  445543  68999876422111011 22211111  12222222211111


Q ss_pred             ecCCCcEEEEEEeecCCeEEEEE
Q 023979           89 MRDKAAFQRIVMNQTLYLVQRFT  111 (274)
Q Consensus        89 ~~~~~~~~rl~L~~dG~l~~~y~  111 (274)
                      ........+++|..||+| .+|.
T Consensus        81 t~~~~~~~~~~L~ddGnl-vl~~  102 (114)
T smart00108       81 TTGANGNYVLVLLDDGNL-VIYD  102 (114)
T ss_pred             ccCCCCceEEEEeCCCCE-EEEC
Confidence            111234578999999999 9885

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=95.19  E-value=0.087  Score=40.10  Aligned_cols=94  Identities=13%  Similarity=0.038  Sum_probs=49.5

Q ss_pred             ceEEEEecCCCCCCCeeEEEEEec-CCCcEEEEEcC--CeeEEEcCCCCCceeec-cccCCCCeeeEEEEecCceEEEEE
Q 023979           12 DRRITSWKSPDDPSPGNFIWAVER-QDNPELIMWKG--SRKFHRSGPWNGLRFSA-SSLRPNPVFNFGFVSNEVELYYKF   87 (274)
Q Consensus        12 ~~~L~Sw~s~~dps~G~y~l~~~~-~g~~~l~~~~~--~~~Yw~sg~w~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   87 (274)
                      +..|+|-  ....+.|.|++.++. ++++  +++..  ..++|.+..-....... ..+...+.+  .+.+.++.....-
T Consensus         7 ~~~l~s~--~~~f~~G~~~~~~q~~dgnl--v~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnL--vl~~~~g~~vW~S   80 (116)
T cd00028           7 GQTLVSS--GSLFELGFFKLIMQSRDYNL--ILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNL--VIYDGSGTVVWSS   80 (116)
T ss_pred             CCEEEeC--CCcEEEecccCCCCCCeEEE--EEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCe--EEEcCCCcEEEEe
Confidence            4567773  344568999999987 7764  34444  36899887632101011 122211111  1222222221111


Q ss_pred             EecCCCcEEEEEEeecCCeEEEEEE
Q 023979           88 DMRDKAAFQRIVMNQTLYLVQRFTW  112 (274)
Q Consensus        88 ~~~~~~~~~rl~L~~dG~l~~~y~w  112 (274)
                      .........+++|..||+| .+|.-
T Consensus        81 ~~~~~~~~~~~~L~ddGnl-vl~~~  104 (116)
T cd00028          81 NTTRVNGNYVLVLLDDGNL-VLYDS  104 (116)
T ss_pred             cccCCCCceEEEEeCCCCE-EEECC
Confidence            1111234579999999999 98863

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=95.05  E-value=0.056  Score=37.56  Aligned_cols=57  Identities=16%  Similarity=0.440  Sum_probs=41.4

Q ss_pred             ceEEEeeecCCCCccceeeccCChHHHHHHHhcCCc-eEEEEeccccCCCceeEeeccccce
Q 023979          183 GFIKFTAMKLPDATLSWVSKSMNLNECREKCLDNSS-CMAYTNSDIRGEGSGCAMWFGELID  243 (274)
Q Consensus       183 ~f~~l~~~~~p~~~~~~~~~~~~~~~C~~~Cl~nCs-C~a~~~~~~~~~g~~C~~w~~~l~~  243 (274)
                      .|..+++..+........ ...++++|.+.|+.+=. |.+|.|..   ....|.+.......
T Consensus         3 ~f~~~~~~~l~~~~~~~~-~v~s~~~C~~~C~~~~~~C~s~~y~~---~~~~C~L~~~~~~~   60 (79)
T PF00024_consen    3 AFERIPGYRLSGHSIKEI-NVPSLEECAQLCLNEPRRCKSFNYDP---SSKTCYLSSSDRSS   60 (79)
T ss_dssp             TEEEEEEEEEESCEEEEE-EESSHHHHHHHHHHSTT-ESEEEEET---TTTEEEEECSSSSS
T ss_pred             CeEEECCEEEeCCcceEE-cCCCHHHHHhhcCcCcccCCeEEEEC---CCCEEEEcCCCCCc
Confidence            477788877766444333 34489999999999999 99999974   23469997654443

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs It has been shown that, the N-terminal N domains of members of the plasminogen/hepatocyte growth factor family, the apple domains of the plasma prekallikrein/coagulation factor XI family, and domains of various nematode proteins belong to the same module superfamily, the PAN module []. PAN contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge that links the N and C termini of the domain.; PDB: 1GP9_C 2QJ2_B 1GMO_H 1NK1_B 3MKP_B 1BHT_B 3HN4_A 1GMN_A 3HMS_A 3HMT_B ....

>PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A

Probab=94.42  E-value=0.037  Score=35.22  Aligned_cols=35  Identities=20%  Similarity=0.491  Sum_probs=18.0

Q ss_pred             cCChHHHHHHHhcCCceEEEEecccc--CCCceeEee
Q 023979          203 SMNLNECREKCLDNSSCMAYTNSDIR--GEGSGCAMW  237 (274)
Q Consensus       203 ~~~~~~C~~~Cl~nCsC~a~~~~~~~--~~g~~C~~w  237 (274)
                      ..+.++|++.|..+=.|.+|.|....  .....|+|+
T Consensus        15 ~~s~~~C~~~C~~~~~C~~~~~~~~~~~~~~~~C~LK   51 (51)
T PF14295_consen   15 ASSPEECQAACAADPGCQAFTFNPPGCPSSSGRCYLK   51 (51)
T ss_dssp             ---HHHHHHHHHTSTT--EEEEETTEE----------
T ss_pred             CCCHHHHHHHccCCCCCCEEEEECCCcccccccccCC
Confidence            45789999999999999999997410  122348763

>PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=90.70  E-value=1.1  Score=30.59  Aligned_cols=41  Identities=15%  Similarity=0.522  Sum_probs=31.7

Q ss_pred             ccCChHHHHHHHhcCCceEEEEeccccCCCceeEeec-cccceeEEc
Q 023979          202 KSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWF-GELIDMRDF  247 (274)
Q Consensus       202 ~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~g~~C~~w~-~~l~~~~~~  247 (274)
                      ...+.++|-+.|..+-.|.++.+.     ...|.++. +++..+++.
T Consensus        18 ~~~sw~~Cv~~C~~~~~C~la~~~-----~~~C~~y~~~~i~~v~~~   59 (71)
T PF08277_consen   18 TNTSWDDCVQKCYNDENCVLAYFD-----SGKCYLYNYGSISTVQKT   59 (71)
T ss_pred             cCCCHHHHhHHhCCCCEEEEEEeC-----CCCEEEEEcCCEEEEEEe
Confidence            456789999999999999999885     24799975 555555554

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs The PAN-3 or CW is a domain associated with a number of Caenorhabditis elegans hypothetical proteins.

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=90.54  E-value=0.17  Score=31.10  Aligned_cols=32  Identities=25%  Similarity=0.618  Sum_probs=24.9

Q ss_pred             CCCCCC-CCCCCCcccccC-CCCccccCCCceec
Q 023979          128 DLCDTY-ALCGAYGICIIS-DMPVCQCLKGFKPK  159 (274)
Q Consensus       128 ~~C~~~-~~CG~~g~C~~~-~~~~C~C~~GF~~~  159 (274)
                      |.|... ..|..++.|... +.-.|.|++||...
T Consensus         3 dEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~   36 (42)
T PF07645_consen    3 DECAEGPHNCPENGTCVNTEGSYSCSCPPGYELN   36 (42)
T ss_dssp             STTTTTSSSSSTTSEEEEETTEEEEEESTTEEEC
T ss_pred             cccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEEC
Confidence            677774 479999999754 45679999999844

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>smart00605 CW CW domain

Probab=90.04  E-value=1.9  Score=31.42  Aligned_cols=56  Identities=18%  Similarity=0.602  Sum_probs=40.0

Q ss_pred             ccCChHHHHHHHhcCCceEEEEeccccCCCceeEeec-cccceeEEcCC-CCceEEEEeecC
Q 023979          202 KSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWF-GELIDMRDFPD-GGQDLYIRMSAS  261 (274)
Q Consensus       202 ~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~g~~C~~w~-~~l~~~~~~~~-~~~~~yikv~~~  261 (274)
                      ...+.++|...|..+..|+.+...    ....|.++. +.+..+++... .+..+=+|+..+
T Consensus        20 ~~~sw~~Ci~~C~~~~~Cvlay~~----~~~~C~~f~~~~~~~v~~~~~~~~~~VAfK~~~~   77 (94)
T smart00605       20 ATLSWDECIQKCYEDSNCVLAYGN----SSETCYLFSYGTVLTVKKLSSSSGKKVAFKVSTD   77 (94)
T ss_pred             cCCCHHHHHHHHhCCCceEEEecC----CCCceEEEEcCCeEEEEEccCCCCcEEEEEEeCC
Confidence            356789999999999999987664    124798875 45666766543 456677777543

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=87.21  E-value=0.57  Score=26.68  Aligned_cols=29  Identities=24%  Similarity=0.651  Sum_probs=21.1

Q ss_pred             CCCCCCCCCCcccccC-CCCccccCCCcee
Q 023979          130 CDTYALCGAYGICIIS-DMPVCQCLKGFKP  158 (274)
Q Consensus       130 C~~~~~CG~~g~C~~~-~~~~C~C~~GF~~  158 (274)
                      |.....|..++.|... ....|.|++||..
T Consensus         2 C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g   31 (36)
T cd00053           2 CAASNPCSNGGTCVNTPGSYRCVCPPGYTG   31 (36)
T ss_pred             CCCCCCCCCCCEEecCCCCeEeECCCCCcc
Confidence            3434678888899754 3578999999953

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=86.93  E-value=4.1  Score=30.86  Aligned_cols=25  Identities=16%  Similarity=0.352  Sum_probs=19.2

Q ss_pred             eeEEEEEecCCCcEEEEEcCC-eeEEEc
Q 023979           27 GNFIWAVERQDNPELIMWKGS-RKFHRS   53 (274)
Q Consensus        27 G~y~l~~~~~g~~~l~~~~~~-~~Yw~s   53 (274)
                      |.|+|.|+.||+++  +++.. .++|.+
T Consensus        19 ~~~~L~l~~dGnLv--l~~~~~~~iWss   44 (114)
T PF01453_consen   19 GNYTLILQSDGNLV--LYDSNGSVIWSS   44 (114)
T ss_dssp             TTEEEEEETTSEEE--EEETTTEEEEE-
T ss_pred             ccccceECCCCeEE--EEcCCCCEEEEe
Confidence            78999999999854  45654 789987

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>PF01683 EB: EB module; InterPro: IPR006149 The EB domain has no known function

Probab=85.32  E-value=0.94  Score=29.09  Aligned_cols=34  Identities=24%  Similarity=0.604  Sum_probs=27.7

Q ss_pred             eecCCCCCCCCCCCCCcccccCCCCccccCCCceecC
Q 023979          124 NVPRDLCDTYALCGAYGICIISDMPVCQCLKGFKPKS  160 (274)
Q Consensus       124 ~~p~~~C~~~~~CG~~g~C~~~~~~~C~C~~GF~~~~  160 (274)
                      ..|-+.|....-|-.++.|.   ...|.|++||.+..
T Consensus        16 ~~~g~~C~~~~qC~~~s~C~---~g~C~C~~g~~~~~   49 (52)
T PF01683_consen   16 VQPGESCESDEQCIGGSVCV---NGRCQCPPGYVEVG   49 (52)
T ss_pred             CCCCCCCCCcCCCCCcCEEc---CCEeECCCCCEecC
Confidence            34567899999999999995   46899999998764

It is found in several Caenorhabditis sp. and Drosophila sp. proteins. The domain contains 8 conserved cysteines that probably form four disulphide bridges and is found associated with kunitz domains IPR002223 from INTERPRO

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=83.37  E-value=1.1  Score=26.23  Aligned_cols=30  Identities=27%  Similarity=0.675  Sum_probs=21.8

Q ss_pred             CCCCCCCCCCCCcccccC-CCCccccCCCce
Q 023979          128 DLCDTYALCGAYGICIIS-DMPVCQCLKGFK  157 (274)
Q Consensus       128 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~GF~  157 (274)
                      +.|.....|...+.|... ....|.|++||.
T Consensus         3 ~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~   33 (39)
T smart00179        3 DECASGNPCQNGGTCVNTVGSYRCECPPGYT   33 (39)
T ss_pred             ccCcCCCCcCCCCEeECCCCCeEeECCCCCc
Confidence            456554568888889754 345799999996

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=82.67  E-value=0.45  Score=21.71  Aligned_cols=10  Identities=40%  Similarity=1.049  Sum_probs=7.1

Q ss_pred             ccccCCCcee
Q 023979          149 VCQCLKGFKP  158 (274)
Q Consensus       149 ~C~C~~GF~~  158 (274)
                      .|.|++||+-
T Consensus         1 ~C~C~~G~~G   10 (13)
T PF12661_consen    1 TCQCPPGWTG   10 (13)
T ss_dssp             EEEE-TTEET
T ss_pred             CccCcCCCcC
Confidence            4899999963

>cd01099 PAN_AP_HGF Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins

Probab=82.34  E-value=4.1  Score=28.68  Aligned_cols=36  Identities=22%  Similarity=0.537  Sum_probs=28.0

Q ss_pred             cCChHHHHHHHhc--CCceEEEEeccccCCCceeEeecccc
Q 023979          203 SMNLNECREKCLD--NSSCMAYTNSDIRGEGSGCAMWFGEL  241 (274)
Q Consensus       203 ~~~~~~C~~~Cl~--nCsC~a~~~~~~~~~g~~C~~w~~~l  241 (274)
                      ..++++|.+.|++  +=.|.++.|..   ....|.+-..+.
T Consensus        24 ~~s~~~C~~~C~~~~~f~CrSf~y~~---~~~~C~L~~~~~   61 (80)
T cd01099          24 VASLEECLRKCLEETEFTCRSFNYNY---KSKECILSDEDR   61 (80)
T ss_pred             cCCHHHHHHHhCCCCCceEeEEEEEc---CCCEEEEeCCCc
Confidence            4689999999999  89999999964   234699854443

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	274
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	99.14
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	98.85
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	97.54
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	97.48
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	97.25
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	96.87
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	96.81
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	96.81
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	96.78
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	96.78
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	96.6
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	96.28
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	96.24
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	95.9
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	95.76
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	94.93
2ll3_A	82	Micronemal protein 4; cell adhesion; NMR {Toxoplas	94.1
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	88.62
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	88.09
4a5v_A	161	MIC4, micronemal protein 4; adhesion; NMR {Toxopla	85.63
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	85.57
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	83.9
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	82.95
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	82.03
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	81.64
4a5v_A	161	MIC4, micronemal protein 4; adhesion; NMR {Toxopla	81.55

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=99.14  E-value=2.4e-11  Score=106.09  Aligned_cols=110  Identities=11%  Similarity=0.048  Sum_probs=71.8

Q ss_pred             CeeeeecCCCCceEEEEecCCCCCCCeeEEEEEecCCCcEEEEEcC-CeeEEEcCCCCCceeeccccCCCCeeeEEEEec
Q 023979            1 MKFGWDLKTGLDRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKG-SRKFHRSGPWNGLRFSASSLRPNPVFNFGFVSN   79 (274)
Q Consensus         1 mklg~n~~tg~~~~L~Sw~s~~dps~G~y~l~~~~~g~~~l~~~~~-~~~Yw~sg~w~~~~~~~~~~~~~~~~~~~~~~~   79 (274)
                      ||||+|+++|+.  |   +|.+||++|.|+|+|+++|+  +++|+. +.+||++|+|+...... .+....  .+.+.++
T Consensus       143 ~~~~~~l~~g~~--L---~S~~dps~G~fsl~l~~dGn--lvLy~~~~~~yW~Sgt~~~~~~~l-~l~~dG--nLvl~d~  212 (276)
T 3m7h_A          143 AIDSLLLAPGSE--L---VQGVVYGAGASKLVFQGDGN--LVAYGPNGAATWNAGTQGKGAVRA-VFQGDG--NLVVYGA  212 (276)
T ss_dssp             CTTCEEECSSEE--E---CTTCEEEETTEEEEECTTSC--EEEECTTSSEEEECCCTTTTCCEE-EECTTS--CEEEECT
T ss_pred             cccccccccCcc--c---ccCCCCCCceEEEeecCCce--EEEEeCCCeEEEECCCCCCccEEE-EEcCCC--eEEEEeC
Confidence            789999998854  6   67899999999999999986  445664 58999999986532111 222221  1223343


Q ss_pred             Cc-eEEEEEEecCCCcEEEEEEeecCCeEEEEEEcCCCCceEEEEeec
Q 023979           80 EV-ELYYKFDMRDKAAFQRIVMNQTLYLVQRFTWNKATQSWELYSNVP  126 (274)
Q Consensus        80 ~~-~~~~~~~~~~~~~~~rl~L~~dG~l~~~y~w~~~~~~W~~~~~~p  126 (274)
                      ++ .+..++..  ....+|++|+.||+| ++|.|   ...|..++..|
T Consensus       213 ~~~~vWsS~t~--~~~~~rl~Ld~dGnL-vly~~---~~~Wqsf~~~P  254 (276)
T 3m7h_A          213 GNAVLWHSHTG--GHASAVLRLQANGSI-AILDE---KPVWARFGFQP  254 (276)
T ss_dssp             TSCEEEECSCT--TCTTCEEEECTTSCE-EEEEE---EEEEESSSCCT
T ss_pred             CCcEEEEecCC--CCCCEEEEEcCCccE-EEEcC---CCeEEccCccC
Confidence            32 33333322  223479999999999 99998   22355544444

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=98.85  E-value=3.8e-09  Score=90.01  Aligned_cols=99  Identities=9%  Similarity=0.115  Sum_probs=65.9

Q ss_pred             eeec-CCCC-----ceEEEEecCCCCCCCeeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeecc-ccCCCCeeeEEE
Q 023979            4 GWDL-KTGL-----DRRITSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSAS-SLRPNPVFNFGF   76 (274)
Q Consensus         4 g~n~-~tg~-----~~~L~Sw~s~~dps~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~~-~~~~~~~~~~~~   76 (274)
                      |.|. .+|+     ++.|+|   .+||++|.|+|+|+++|  +++++++..+||++++|++. +... .+.... ..+.+
T Consensus       124 g~d~L~~gq~~~~~~~~L~s---~~d~s~G~~~l~l~~dG--~LvL~~~~~~~W~s~~~~~~-~~~~~~L~~~G-nl~ly  196 (236)
T 1dlp_A          124 GNSILYSTQGNDNHPQTLHA---TQSLQLSPYRLSMETDC--NLVLFDRDDRVWSTNTAGKG-TGCRAVLQPNG-RMDVL  196 (236)
T ss_dssp             CCEECCCC--CCCCCCEECS---SCCCBCSSCEEEEETTT--EEEEEBTTBCCSCCCCCSSC-SSCEEEEETTT-EEEEE
T ss_pred             cceEEecCCcCCCccceEEc---CcEeecCcEEEEECCCC--cEEEEcCCEeEEeCCCcCCC-CceEEEECCCC-cEEEE
Confidence            4555 6666     567874   78999999999999998  47778888899999999643 3333 443222 22223


Q ss_pred             EecCceEEEEEEecCCCcEEEEEEeecCCeEEEEE
Q 023979           77 VSNEVELYYKFDMRDKAAFQRIVMNQTLYLVQRFT  111 (274)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~rl~L~~dG~l~~~y~  111 (274)
                      ..++.+++.+|..... ..+|++|++||++ ++|.
T Consensus       197 ~~~~~~vw~s~~~~~~-~~~rl~Ld~dG~l-~ly~  229 (236)
T 1dlp_A          197 TNQNIAVWTSGNSRSA-GRYVFVLQPDRNL-AIYG  229 (236)
T ss_dssp             ETTTEEEEECCCCCSS-SCCEEEECSSSCE-EEEC
T ss_pred             eCCCcEEEEeCCCCCC-CCEEEEEcCCCcE-EEeC
Confidence            2234444555443222 3579999999999 9984

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=97.54  E-value=0.00065  Score=50.06  Aligned_cols=80  Identities=8%  Similarity=0.060  Sum_probs=45.6

Q ss_pred             eeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeec-cccCCCCeeeEEEEecCceEEEEEEecCCCcEEEEEEeecCC
Q 023979           27 GNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSA-SSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLY  105 (274)
Q Consensus        27 G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~L~~dG~  105 (274)
                      |.|+|.|+.|+++  ++|+...+.|.++..+...... ..+.... . +.+.+.+..............-.+++|..||+
T Consensus        19 g~y~l~~q~DgNL--vly~~~~~vW~ant~~~~~~~~~L~l~~dG-n-LvL~d~~~~~vWss~t~~~~~~~~l~L~ddGN   94 (105)
T 4h3o_A           19 EPYHFIMQDDCNL--VLYDHSTSTWASNTEIGGKSGCSAVLQSDG-N-FVVYDSSGRSLWASHSTRGSGNYILILQDDGN   94 (105)
T ss_dssp             TTEEEEECTTSCE--EEEETTEEEEECCCCCTTCCSCEEEECTTS-C-EEEECTTCCEEEECCCCCCSSCEEEEECTTSC
T ss_pred             CCEEEEECCCCeE--EEEECCEEEEEecCCCCCCccEEEEEeCCc-c-EEEECCCcEEEEEecCCCCCCCEEEEEeCCCe
Confidence            7899999999985  4578888999987643211111 1222222 1 11233332222221111222346899999999


Q ss_pred             eEEEEE
Q 023979          106 LVQRFT  111 (274)
Q Consensus       106 l~~~y~  111 (274)
                      | .+|.
T Consensus        95 l-Vly~   99 (105)
T 4h3o_A           95 V-IIYG   99 (105)
T ss_dssp             E-EEEE
T ss_pred             E-EEEC
Confidence            9 8883

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=97.48  E-value=0.00014  Score=54.28  Aligned_cols=41  Identities=17%  Similarity=0.442  Sum_probs=33.4

Q ss_pred             EEecCCCCCCCeeEEEEEecCCCcEEEEEc-CCeeEEEcCCCCC
Q 023979           16 TSWKSPDDPSPGNFIWAVERQDNPELIMWK-GSRKFHRSGPWNG   58 (274)
Q Consensus        16 ~Sw~s~~dps~G~y~l~~~~~g~~~l~~~~-~~~~Yw~sg~w~~   58 (274)
                      +-|.|.++|++|.|+++|+++|+  |++|+ ...+||++++|+|
T Consensus        70 ~~W~S~~~~~~g~~~l~l~~dGn--lvl~~~~~~~~W~S~~~~g  111 (112)
T 1xd5_A           70 AIWASNTNRQNGNYYLILQRDRN--VVIYDNSNNAIWATHTNVG  111 (112)
T ss_dssp             EEEECCCCCSCCCCEEEECTTSC--EEEECTTSCEEEECCCCCC
T ss_pred             EEEECCccCCCCCEEEEEeCCCc--EEEECCCCceEEECCCccC
Confidence            56889999999999999999888  45565 4678999999875

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=97.25  E-value=0.0015  Score=48.32  Aligned_cols=80  Identities=6%  Similarity=0.075  Sum_probs=45.5

Q ss_pred             CeeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeecc-ccCCCCeeeEEEEecCceEEEEEEecCCCcEEEEEEeecC
Q 023979           26 PGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSAS-SLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTL  104 (274)
Q Consensus        26 ~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~L~~dG  104 (274)
                      .|.|+|.|+.+|++  ++++...++|.++..... .... .+...+ . +.+.+.+......-.........+++|+.||
T Consensus        18 ~g~~~L~~q~dGnL--vly~~~~~vW~snt~~~~-~~~~l~l~~dG-N-Lvl~~~~~~~~W~S~t~~~~~~~~~~L~ddG   92 (109)
T 3dzw_A           18 NGRYVFIMQEDCNL--VLYDVDKPIWATNTGGLD-RRCHLSMQSDG-N-LVVYSPRNNPIWASNTGGENGNYVCVLQKDR   92 (109)
T ss_dssp             ETTEEEEECTTSCE--EEEETTEEEEECCCTTSS-SSCEEEECTTS-C-EEEECTTSCEEEECCCCCSSSCEEEEECTTS
T ss_pred             CCCEEEEEcCCCcE--EEEeCCEEEEECCcccCC-CCEEEEEeCCC-C-EEEECCCCCEEEECCCCCCCCCEEEEEeCCC
Confidence            58999999999985  446777899998764311 1111 222221 1 1123322222111111112234789999999


Q ss_pred             CeEEEEE
Q 023979          105 YLVQRFT  111 (274)
Q Consensus       105 ~l~~~y~  111 (274)
                      +| ++|.
T Consensus        93 Nl-vly~   98 (109)
T 3dzw_A           93 NV-VIYG   98 (109)
T ss_dssp             CE-EEEE
T ss_pred             EE-EEEC
Confidence            99 9985

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=96.87  E-value=0.0025  Score=47.42  Aligned_cols=78  Identities=10%  Similarity=0.042  Sum_probs=43.9

Q ss_pred             CeeEEEEEecCCCcEEEEEcC--CeeEEEcCCCCCceeecc-ccCCCCeeeEEEEecCceEEEEEEec--CCCcEEEEEE
Q 023979           26 PGNFIWAVERQDNPELIMWKG--SRKFHRSGPWNGLRFSAS-SLRPNPVFNFGFVSNEVELYYKFDMR--DKAAFQRIVM  100 (274)
Q Consensus        26 ~G~y~l~~~~~g~~~l~~~~~--~~~Yw~sg~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~rl~L  100 (274)
                      .|.|+|.|+.+|++++  ++.  ..+||.++..... .... .+...+ . +.+.+.+...  .....  .....++++|
T Consensus        23 ~g~~~L~~q~dGNLvL--~~~~~~~~vWssnt~~~~-~~~~l~l~~dG-N-LVl~d~~~~~--iW~S~t~~~~~~~~~~L   95 (113)
T 3mez_B           23 TRDYSLVMRDDCNLVL--TKGSKTNIVWESGTSGRG-QHCFMRLGHSG-E-LDITDDRLNT--VFVSNTVGQEGDYVLIL   95 (113)
T ss_dssp             ETTEEEEECTTSCEEE--EETTTTEEEEECCCTTSC-SSCEEEECTTS-C-EEEECTTSCE--EEECSCCCSSSCCEEEE
T ss_pred             cCCEEEEEcCCCEEEE--EECCCCEEEEECCcccCC-cCEEEEEeCCC-c-EEEECCCCCE--EEECCCcCCCCCEEEEE
Confidence            4789999999998644  554  5799998764211 1111 222221 1 1123333222  22221  1122368999


Q ss_pred             eecCCeEEEEE
Q 023979          101 NQTLYLVQRFT  111 (274)
Q Consensus       101 ~~dG~l~~~y~  111 (274)
                      +.||+| ++|.
T Consensus        96 ~~dGnl-vly~  105 (113)
T 3mez_B           96 QINGQA-VVYG  105 (113)
T ss_dssp             CTTSCE-EEEC
T ss_pred             cCCceE-EEec
Confidence            999999 9984

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=96.81  E-value=0.0012  Score=49.75  Aligned_cols=35  Identities=14%  Similarity=0.509  Sum_probs=20.0

Q ss_pred             EecCCCCCCCeeEEEEEecCCCcEEEEEcCCeeEEEcCC
Q 023979           17 SWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGP   55 (274)
Q Consensus        17 Sw~s~~dps~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~   55 (274)
                      -|.|.++|++|.|+++|+++|+  +++++  .+||++|+
T Consensus        83 lW~S~~~~~~g~~~l~l~~~Gn--lvl~~--~~~W~Sg~  117 (119)
T 1b2p_A           83 VWQSPVAGKAGHYVLVLQPDRN--VVIYG--DALWATQT  117 (119)
T ss_dssp             EEECSCCCCSSCEEEEECTTSC--EEEEE--SEEEECCC
T ss_pred             EEcCCCCCCCCCEEEEEECCCc--EEEEC--ccEeCCCC
Confidence            4666666666666666666665  33333  25666654

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=96.81  E-value=0.0029  Score=46.85  Aligned_cols=78  Identities=8%  Similarity=0.022  Sum_probs=42.4

Q ss_pred             eeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeecc-ccCCCCeeeEEEEecCceEEEEEEecCCCcEEEEEEeecCC
Q 023979           27 GNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSAS-SLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLY  105 (274)
Q Consensus        27 G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~L~~dG~  105 (274)
                      |.|+|.|+.+|+++  +++. .+||.++..... .... .+...+-+  .+.+.++.....-........++++|+.||+
T Consensus        24 g~~~L~~q~dGnLv--l~~~-~~vW~snt~~~~-~~~~l~l~~dGNL--vl~d~~~~~iW~S~t~~~~~~~~~~L~~dGN   97 (110)
T 3r0e_B           24 KNHQLVMQGDCNLV--LYGG-KYGWQSNTHGNG-EHCFLRLNHKGEL--IIKDDDFKTIWSSRSSSKQGEYVLILQDDGF   97 (110)
T ss_dssp             SSCEEEECTTSCEE--EECS-SSCEECCCTTSS-SSCEEEECTTSCE--EEECTTCCEEEECCCCCSSSCCEEEECTTSC
T ss_pred             CCEEEEEcCCCeEE--EECC-eEEEECCCcCCC-cCEEEEEeCCCcE--EEEeCCCCEEEEcCCcCCCCCEEEEEcCCcc
Confidence            67999999999854  4666 689998764311 1111 22222111  1233222221111111112236899999999


Q ss_pred             eEEEEE
Q 023979          106 LVQRFT  111 (274)
Q Consensus       106 l~~~y~  111 (274)
                      | ++|.
T Consensus        98 l-vly~  102 (110)
T 3r0e_B           98 G-VIYG  102 (110)
T ss_dssp             E-EEEC
T ss_pred             E-EEec
Confidence            9 9985

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=96.78  E-value=0.0025  Score=47.14  Aligned_cols=78  Identities=15%  Similarity=0.093  Sum_probs=42.6

Q ss_pred             CCeeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeecc-ccCCCCeeeEEEEecCceEEEEEEecCCCcEEEEEEeec
Q 023979           25 SPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSAS-SLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQT  103 (274)
Q Consensus        25 s~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~L~~d  103 (274)
                      +.|.|.|.|+.+|++++  +++   ||.++..... .... .+....-+  .+.+.+................+++|+.|
T Consensus        19 ~~g~~~L~~q~dGNLvl--~~~---~Wssnt~~~~-~~~~l~l~~dGnL--vl~d~~~~~vWss~t~~~~~~~~~~L~~d   90 (109)
T 3r0e_A           19 KNGDFDLVMQDDCNLVL--YNG---NWQSNTANNG-RDCKLTLTDYGEL--VIKNGDGSTVWKSGAQSVKGNYAAVVHPD   90 (109)
T ss_dssp             EETTEEEEECTTSCEEE--ETT---TEECCCTTSC-SSCEEEECTTSCE--EEECTTSCEEEECCCCCSSSCCEEEEETT
T ss_pred             ECCCEEEEEecCCeEEE--EeC---eEEcCCCCCC-CcEEEEEcCCCeE--EEEeCCCCEEEcCCCcCCCcCEEEEEcCC
Confidence            46899999999998654  554   8998765321 1111 22211111  12232222221111111223468999999


Q ss_pred             CCeEEEEE
Q 023979          104 LYLVQRFT  111 (274)
Q Consensus       104 G~l~~~y~  111 (274)
                      |+| ++|.
T Consensus        91 GNl-vly~   97 (109)
T 3r0e_A           91 GRL-VVFG   97 (109)
T ss_dssp             TEE-EEEC
T ss_pred             CeE-EEEe
Confidence            999 9984

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=96.78  E-value=0.0012  Score=48.89  Aligned_cols=34  Identities=9%  Similarity=0.485  Sum_probs=16.5

Q ss_pred             ecCCCCCCCeeEEEEEecCCCcEEEEEcCCeeEEEcCC
Q 023979           18 WKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGP   55 (274)
Q Consensus        18 w~s~~dps~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~   55 (274)
                      |.|.+++++|.|+|+|+++|+  ++++++  +||++++
T Consensus        74 W~S~t~~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~  107 (110)
T 3a0c_A           74 WQTKTNGKEDHYVLVLQQDRN--VVIYGP--VVWATGS  107 (110)
T ss_dssp             EECCCCCSSSCCEEEECTTSC--EEEECS--EEEECSC
T ss_pred             EecCCCCCCCCEEEEEeCCcc--EEEECC--CEecCCC
Confidence            555555555555555555554  223333  4555443

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=96.60  E-value=0.0018  Score=48.39  Aligned_cols=38  Identities=13%  Similarity=0.352  Sum_probs=28.1

Q ss_pred             EEecCCCCCCCeeEEEEEecCCCcEEEEEcCCeeEEEcCCCC
Q 023979           16 TSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPWN   57 (274)
Q Consensus        16 ~Sw~s~~dps~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~   57 (274)
                      +-|.|.+.+++|.|+++|+++|+  |++++.  +||+|++|.
T Consensus        72 ~vW~S~~~~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~~  109 (115)
T 2dpf_A           72 DVWGSACWGDNGKYALVLQKDGR--FVIYGP--VLWSLGPNG  109 (115)
T ss_dssp             EEEECCCCCSSSCCEEEECTTSC--EEEECS--EEECSSTTC
T ss_pred             EEEEcCCCCCCCCEEEEEeCCCe--EEEECC--CEEECCCCC
Confidence            35778887888888888888887  445554  788888875

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=96.28  E-value=0.0056  Score=45.36  Aligned_cols=81  Identities=6%  Similarity=-0.055  Sum_probs=44.2

Q ss_pred             CCeeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeeccccCCCCeeeEEEEecCc-e-EEEEEEe-cCCCcEEEEEEe
Q 023979           25 SPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSASSLRPNPVFNFGFVSNEV-E-LYYKFDM-RDKAAFQRIVMN  101 (274)
Q Consensus        25 s~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~-~~~~~~~rl~L~  101 (274)
                      +.|.|+|.|+.+|+++  +++... ||.++......-....+....-+  .+.+.+. . +..+... .......+++|.
T Consensus        18 ~~g~~~L~~q~dGnLv--l~~~~~-vW~snt~~~~~~~~l~l~~dGNL--Vl~~~~~~~~vW~S~t~~~~~~~~~~l~Lq   92 (111)
T 3mez_A           18 SYESAAFVMQGDCNLV--LYNEAG-GFQSNTHGRGVDCTLRLNNRGQL--EIHSANSNTPVWVYPRSVNTVRGNYAATLG   92 (111)
T ss_dssp             EETTEEEEECTTSCEE--EECSSC-CEECCCTTSCSSCEEEECTTSCE--EEECSSCSSCSEEESSSCCCCSSCCEEEEC
T ss_pred             ecCCEEEEEccCCeEE--EECCCC-EEECCcccCCcCEEEEEcCCCcE--EEEeCCCCEEEEEeccccCCCCcCEEEEEC
Confidence            3588999999999854  466655 99987643211000122222111  1223222 2 3322111 112245789999


Q ss_pred             ecCCeEEEEE
Q 023979          102 QTLYLVQRFT  111 (274)
Q Consensus       102 ~dG~l~~~y~  111 (274)
                      .||+| ++|.
T Consensus        93 ~dGNl-vly~  101 (111)
T 3mez_A           93 PDQHV-TIYG  101 (111)
T ss_dssp             TTSCE-EEEC
T ss_pred             CCCeE-EEec
Confidence            99999 9995

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=96.24  E-value=0.018  Score=42.77  Aligned_cols=78  Identities=8%  Similarity=0.066  Sum_probs=44.2

Q ss_pred             CeeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeecc-ccCCCCeeeEEEEecCce-EEEEEEecCCCcEEEEEEeec
Q 023979           26 PGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSAS-SLRPNPVFNFGFVSNEVE-LYYKFDMRDKAAFQRIVMNQT  103 (274)
Q Consensus        26 ~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~rl~L~~d  103 (274)
                      .|.|.|.|+.+|++.  +++...++|.++..... .... .+...+-+  .+.+.+.. +.-++... .....+++|++|
T Consensus        19 ~g~~~L~~~~dgnlv--ly~~~~~vW~sn~~~~~-~~~~l~l~~~GnL--vl~d~~~~~vW~S~~~~-~~g~~~l~l~~d   92 (115)
T 2dpf_A           19 AGAYTLTIQNKCNLV--KYQNGRQIWASNTDRRG-SGCRLTLLSDGNL--VIYDHNNNDVWGSACWG-DNGKYALVLQKD   92 (115)
T ss_dssp             ETTEEEEECTTSCEE--EEETTEEEEECSCTTSC-SSCEEEECTTSCE--EEECTTCCEEEECCCCC-SSSCCEEEECTT
T ss_pred             CCCEEEEEcCCCcEE--EEeCCEEEEeCCCCCCC-CceEEEECCCCcE--EEECCCceEEEEcCCCC-CCCCEEEEEeCC
Confidence            588999999999864  45667899998865321 1111 22222211  12232222 22222221 123458999999


Q ss_pred             CCeEEEE
Q 023979          104 LYLVQRF  110 (274)
Q Consensus       104 G~l~~~y  110 (274)
                      |+| ++|
T Consensus        93 Gnl-vl~   98 (115)
T 2dpf_A           93 GRF-VIY   98 (115)
T ss_dssp             SCE-EEE
T ss_pred             CeE-EEE
Confidence            999 887

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=95.90  E-value=0.041  Score=40.54  Aligned_cols=79  Identities=9%  Similarity=0.189  Sum_probs=44.6

Q ss_pred             CeeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeecc-ccCCCCeeeEEEEecCceEEEEEEecCCCcEEEEEEeecC
Q 023979           26 PGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSAS-SLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTL  104 (274)
Q Consensus        26 ~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~L~~dG  104 (274)
                      .|.|+|.|+.+|+++  +++...++|.++.... ..... .+....-+.  +.+....+.-++... .....+++|++||
T Consensus        18 ~~~~~L~~~~dgnlv--l~~~~~~vW~sn~~~~-~~~~~l~l~~~GNLv--l~d~~~~~W~S~~~~-~~g~~~l~l~~dG   91 (112)
T 1xd5_A           18 EGGYLFIIQNDCNLV--LYDNNRAVWASGTNGK-ASGCVLKMQNDGNLV--IYSGSRAIWASNTNR-QNGNYYLILQRDR   91 (112)
T ss_dssp             ETTEEEEECTTSCEE--EEETTEEEEECCCTTS-CSSEEEEECTTSCEE--EEETTEEEEECCCCC-SCCCCEEEECTTS
T ss_pred             CCCEEEEEcCCCcEE--EEECCEEEEeCCCcCC-CCCEEEEEeCCCCEE--EEcCCEEEEECCccC-CCCCEEEEEeCCC
Confidence            578999999999864  4566789999886431 11111 232222111  223222222233221 1224589999999


Q ss_pred             CeEEEEE
Q 023979          105 YLVQRFT  111 (274)
Q Consensus       105 ~l~~~y~  111 (274)
                      +| .+|.
T Consensus        92 nl-vl~~   97 (112)
T 1xd5_A           92 NV-VIYD   97 (112)
T ss_dssp             CE-EEEC
T ss_pred             cE-EEEC
Confidence            99 8874

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=95.76  E-value=0.13  Score=38.25  Aligned_cols=80  Identities=10%  Similarity=0.145  Sum_probs=45.3

Q ss_pred             CCeeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeecc-ccCCCCeeeEEEEecCc-eEEEEEEecCCCcEEEEEEee
Q 023979           25 SPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSAS-SLRPNPVFNFGFVSNEV-ELYYKFDMRDKAAFQRIVMNQ  102 (274)
Q Consensus        25 s~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~rl~L~~  102 (274)
                      ..|.|+|.|+.+|++  ++++...+.|.++.... ..... .+...+-+  .+.+.++ .+.-++..+. ....+++|+.
T Consensus        28 ~~g~~~L~~~~dgnl--vly~~~~~vW~sn~~~~-~~~~~l~l~~dGNL--Vl~d~~~~~lW~S~~~~~-~g~~~l~l~~  101 (119)
T 1b2p_A           28 GTHVYRFIMQTDCNL--VLYDNNNPIWATNTGGL-GNGCRAVLQPDGVL--VVITNENVTVWQSPVAGK-AGHYVLVLQP  101 (119)
T ss_dssp             TTEEEEEEECTTSCE--EEEETTEEEEECCCTTS-CSSCEEEECTTSCE--EEECTTCCEEEECSCCCC-SSCEEEEECT
T ss_pred             CCCCEEEEEecCCCE--EEEECCEEEEeCCCccC-CCceEEEEccCCEE--EEEeCCCcEEEcCCCCCC-CCCEEEEEEC
Confidence            368999999999985  45677789999876421 11111 22222211  1223222 2333332211 2245799999


Q ss_pred             cCCeEEEEE
Q 023979          103 TLYLVQRFT  111 (274)
Q Consensus       103 dG~l~~~y~  111 (274)
                      ||+| .+|.
T Consensus       102 ~Gnl-vl~~  109 (119)
T 1b2p_A          102 DRNV-VIYG  109 (119)
T ss_dssp             TSCE-EEEE
T ss_pred             CCcE-EEEC
Confidence            9999 8874

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=94.93  E-value=0.11  Score=38.10  Aligned_cols=78  Identities=8%  Similarity=0.034  Sum_probs=43.6

Q ss_pred             CeeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeecc-ccCCCCeeeEEEEecC-ceEEEEEEecCCCcEEEEEEeec
Q 023979           26 PGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSAS-SLRPNPVFNFGFVSNE-VELYYKFDMRDKAAFQRIVMNQT  103 (274)
Q Consensus        26 ~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~rl~L~~d  103 (274)
                      .|.|+|.|+.+|++  ++++...+.|.++..... .... .+...+-+  .+.+.+ ..+.-++.... ....++.|+.|
T Consensus        19 ~~~~~l~~~~dGnl--vl~~~~~~vW~sn~~~~~-~~~~l~l~~dGNL--Vl~~~~~~~~W~S~t~~~-~g~~~l~l~~d   92 (110)
T 3a0c_A           19 GPSYRLIMQGDCNF--VLYDSGKPVWASNTGGLG-SGCRLTLHNNGNL--VIYDQSNRVIWQTKTNGK-EDHYVLVLQQD   92 (110)
T ss_dssp             TTTEEEEECTTSCE--EEEETTEEEEECCCTTSC-SSCEEEECTTSCE--EEECTTCCEEEECCCCCS-SSCCEEEECTT
T ss_pred             CCCEEEEEcCCCcE--EEEECCEEEEECCCCCCC-CcEEEEEeCCCCE--EEECCCCcEEEecCCCCC-CCCEEEEEeCC
Confidence            46799999999985  456667899998764211 1111 22222211  122322 22333332211 22357999999


Q ss_pred             CCeEEEE
Q 023979          104 LYLVQRF  110 (274)
Q Consensus       104 G~l~~~y  110 (274)
                      |+| .+|
T Consensus        93 Gnl-vl~   98 (110)
T 3a0c_A           93 RNV-VIY   98 (110)
T ss_dssp             SCE-EEE
T ss_pred             ccE-EEE
Confidence            999 886

>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*

Probab=94.10  E-value=0.07  Score=37.13  Aligned_cols=34  Identities=29%  Similarity=0.583  Sum_probs=28.3

Q ss_pred             cCChHHHHHHHhcCCceEEEEeccccCCCceeEeecc
Q 023979          203 SMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFG  239 (274)
Q Consensus       203 ~~~~~~C~~~Cl~nCsC~a~~~~~~~~~g~~C~~w~~  239 (274)
                      .+++++|+..|+.+=.|.||.|..   ....|+++.+
T Consensus        29 ~~sl~~Cq~aC~a~~~C~aFTyN~---~s~~CflKs~   62 (82)
T 2ll3_A           29 ASSLSECRARCQAEKECSHYTYNV---KSGLCYPKRG   62 (82)
T ss_dssp             CSSHHHHHHHHHHCTTEEEEEEET---TTTEEEEEES
T ss_pred             CCCHHHHHHHhhccCCCCeEEecc---CCCceEcccC
Confidence            568999999999999999999973   2346999764

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=88.62  E-value=0.41  Score=34.91  Aligned_cols=37  Identities=14%  Similarity=0.271  Sum_probs=24.4

Q ss_pred             ecCCCCCCCeeEEEEEecCCCcEEEEEcC-CeeEEEcCCC
Q 023979           18 WKSPDDPSPGNFIWAVERQDNPELIMWKG-SRKFHRSGPW   56 (274)
Q Consensus        18 w~s~~dps~G~y~l~~~~~g~~~l~~~~~-~~~Yw~sg~w   56 (274)
                      |.+.+........|.|+.+|++  ++++. ..+.|.++..
T Consensus        40 Wssnt~~~~~~~~l~l~~dGnL--vl~d~~~~~vWss~t~   77 (109)
T 3r0e_A           40 WQSNTANNGRDCKLTLTDYGEL--VIKNGDGSTVWKSGAQ   77 (109)
T ss_dssp             EECCCTTSCSSCEEEECTTSCE--EEECTTSCEEEECCCC
T ss_pred             EEcCCCCCCCcEEEEEcCCCeE--EEEeCCCCEEEcCCCc
Confidence            7766554322478899988885  45554 4678987764

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=88.09  E-value=0.47  Score=34.79  Aligned_cols=38  Identities=8%  Similarity=0.034  Sum_probs=25.0

Q ss_pred             EecCCCCCCCeeEEEEEecCCCcEEEEEcC-CeeEEEcCCC
Q 023979           17 SWKSPDDPSPGNFIWAVERQDNPELIMWKG-SRKFHRSGPW   56 (274)
Q Consensus        17 Sw~s~~dps~G~y~l~~~~~g~~~l~~~~~-~~~Yw~sg~w   56 (274)
                      =|.+.++......++.|+.+|++  ++++. ..+.|.++..
T Consensus        47 vWssnt~~~~~~~~l~l~~dGNL--Vl~d~~~~~iW~S~t~   85 (113)
T 3mez_B           47 VWESGTSGRGQHCFMRLGHSGEL--DITDDRLNTVFVSNTV   85 (113)
T ss_dssp             EEECCCTTSCSSCEEEECTTSCE--EEECTTSCEEEECSCC
T ss_pred             EEECCcccCCcCEEEEEeCCCcE--EEECCCCCEEEECCCc
Confidence            47666543222378999999985  45554 4678998864

>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii}

Probab=85.63  E-value=0.93  Score=35.58  Aligned_cols=50  Identities=14%  Similarity=0.312  Sum_probs=34.6

Q ss_pred             eeecCCCC-ccceeeccCChHHHHHHHhcCCceEEEEeccccCCCceeEeeccc
Q 023979          188 TAMKLPDA-TLSWVSKSMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFGE  240 (274)
Q Consensus       188 ~~~~~p~~-~~~~~~~~~~~~~C~~~Cl~nCsC~a~~~~~~~~~g~~C~~w~~~  240 (274)
                      .++++... +........+.++|++.|..+=.|.+|+|..   ....|+|+...
T Consensus        87 ~~vD~~G~~dl~~~~~~~s~~~Cq~~C~~~~~C~~fTy~~---~~~~C~LK~~~  137 (161)
T 4a5v_A           87 QHVSYEGAPDVMTAMVTSQSADCQAACAADPSCEIFTYNE---HDQKCTFKGRG  137 (161)
T ss_dssp             ESEEECSSCBSSCCCBCSCHHHHHHHHHHCTTCCEEEEET---TTTEEEEECTT
T ss_pred             CCCcccCchhccccccCCCHHHHHHHcccCCCCCEEEeeC---CCCeeEeCCCC
Confidence            46666554 2211123457899999999999999999973   34469997654

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=85.57  E-value=0.65  Score=33.92  Aligned_cols=37  Identities=3%  Similarity=-0.037  Sum_probs=23.6

Q ss_pred             EecCCCCCCCeeEEEEEecCCCcEEEEEcC--CeeEEEcCC
Q 023979           17 SWKSPDDPSPGNFIWAVERQDNPELIMWKG--SRKFHRSGP   55 (274)
Q Consensus        17 Sw~s~~dps~G~y~l~~~~~g~~~l~~~~~--~~~Yw~sg~   55 (274)
                      -|.+.+.......++.|+.+|++  ++++.  ..+.|.++.
T Consensus        40 vW~snt~~~~~~~~l~l~~dGNL--Vl~~~~~~~~vW~S~t   78 (111)
T 3mez_A           40 GFQSNTHGRGVDCTLRLNNRGQL--EIHSANSNTPVWVYPR   78 (111)
T ss_dssp             CEECCCTTSCSSCEEEECTTSCE--EEECSSCSSCSEEESS
T ss_pred             EEECCcccCCcCEEEEEcCCCcE--EEEeCCCCEEEEEecc
Confidence            36666543222378999999985  45664  235898884

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=83.90  E-value=1.1  Score=32.68  Aligned_cols=38  Identities=11%  Similarity=0.179  Sum_probs=25.0

Q ss_pred             EecCCCCCCCeeEEEEEecCCCcEEEEEcC-CeeEEEcCCC
Q 023979           17 SWKSPDDPSPGNFIWAVERQDNPELIMWKG-SRKFHRSGPW   56 (274)
Q Consensus        17 Sw~s~~dps~G~y~l~~~~~g~~~l~~~~~-~~~Yw~sg~w   56 (274)
                      =|.+.++......++.|+.+|++  ++++. ..+.|.++..
T Consensus        44 vW~snt~~~~~~~~l~l~~dGNL--vl~d~~~~~iW~S~t~   82 (110)
T 3r0e_B           44 GWQSNTHGNGEHCFLRLNHKGEL--IIKDDDFKTIWSSRSS   82 (110)
T ss_dssp             CEECCCTTSSSSCEEEECTTSCE--EEECTTCCEEEECCCC
T ss_pred             EEECCCcCCCcCEEEEEeCCCcE--EEEeCCCCEEEEcCCc
Confidence            36666553222368899999985  45664 4689998864

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=82.95  E-value=0.94  Score=32.85  Aligned_cols=39  Identities=8%  Similarity=0.147  Sum_probs=25.9

Q ss_pred             EEecCCCCCCCeeEEEEEecCCCcEEEEEcC-CeeEEEcCCC
Q 023979           16 TSWKSPDDPSPGNFIWAVERQDNPELIMWKG-SRKFHRSGPW   56 (274)
Q Consensus        16 ~Sw~s~~dps~G~y~l~~~~~g~~~l~~~~~-~~~Yw~sg~w   56 (274)
                      +=|.+.++......+|.|+.+|++  ++++. ..+.|.++..
T Consensus        39 ~vW~snt~~~~~~~~l~l~~dGNL--vl~~~~~~~~W~S~t~   78 (109)
T 3dzw_A           39 PIWATNTGGLDRRCHLSMQSDGNL--VVYSPRNNPIWASNTG   78 (109)
T ss_dssp             EEEECCCTTSSSSCEEEECTTSCE--EEECTTSCEEEECCCC
T ss_pred             EEEECCcccCCCCEEEEEeCCCCE--EEECCCCCEEEECCCC
Confidence            457766653322468999999985  45664 4689998764

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=82.03  E-value=0.5  Score=27.36  Aligned_cols=30  Identities=30%  Similarity=0.558  Sum_probs=22.1

Q ss_pred             CCCCCCCCCCCCcccccC-CCCccccCCCcee
Q 023979          128 DLCDTYALCGAYGICIIS-DMPVCQCLKGFKP  158 (274)
Q Consensus       128 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~GF~~  158 (274)
                      +.|. ...|-..|.|... ....|.|++||.-
T Consensus         4 d~C~-~~pC~ngg~C~~~~~~~~C~C~~G~~G   34 (39)
T 1edm_B            4 DQCE-SNPCLNGGSCKDDINSYECWCPFGFEG   34 (39)
T ss_dssp             CTTT-TCCCCTTCEEEEETTEEEEECCTTCCS
T ss_pred             ccCC-CCCCCCCCEeEcCCCceEeECCCCCcC
Confidence            5675 4678888899743 3457999999964

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=81.64  E-value=1  Score=31.79  Aligned_cols=45  Identities=16%  Similarity=0.281  Sum_probs=34.5

Q ss_pred             CCCCCCCCCCCCCccccc--CCCCccccCCCceecCCCCcCCCCceeeCCccccC
Q 023979          127 RDLCDTYALCGAYGICII--SDMPVCQCLKGFKPKSRGYVDWSQGCERDKSLNYS  179 (274)
Q Consensus       127 ~~~C~~~~~CG~~g~C~~--~~~~~C~C~~GF~~~~~~~~~~~~GC~r~~~l~C~  179 (274)
                      ...| +...|+.|+.|-.  +..+.|.|+.+|...       ...|++.....|.
T Consensus         4 ~h~C-~~tkcp~NA~Cyr~~dg~EecRCllnykk~-------~~kCV~~~~~~C~   50 (95)
T 1b9w_A            4 EHRC-IDTNVPENAACYRYLDGTEEWRCLLYFKED-------AGKCVPAPNMTCK   50 (95)
T ss_dssp             GGSC-SSCCCCTTEEEEECTTSCEEEEECTTEEEE-------TTEEEECTTCCTT
T ss_pred             Cccc-ccCCCCCCcCeEEEcCCCEEEEEECCeEec-------CCEEEcCCCCCcc
Confidence            4567 5568999999964  457899999999874       2468888777775

>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii}

Probab=81.55  E-value=1.3  Score=34.79  Aligned_cols=35  Identities=23%  Similarity=0.611  Sum_probs=28.9

Q ss_pred             cCChHHHHHHHhcCCceEEEEeccccCCCceeEeeccc
Q 023979          203 SMNLNECREKCLDNSSCMAYTNSDIRGEGSGCAMWFGE  240 (274)
Q Consensus       203 ~~~~~~C~~~Cl~nCsC~a~~~~~~~~~g~~C~~w~~~  240 (274)
                      ..+.++|+.+|...=.|.+|+|..   .+..|+|+...
T Consensus        30 ~~s~~~Cq~~C~~~p~C~~fTf~~---~~~~C~LK~s~   64 (161)
T 4a5v_A           30 DVSLEQCAAQCKAVDGCTHFTYND---DSKMCHVKEGK   64 (161)
T ss_dssp             TCCHHHHHHHHHHSTTCSEEEEET---TTCCEEEECSS
T ss_pred             CCCHHHHHHHCcCCCCCcEEEEEC---CCCEEEEeCCC
Confidence            457899999999999999999973   34569998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	274
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	98.35
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	97.86
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	97.84
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	97.73
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	97.31
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	97.25
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	95.78
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	93.08
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	92.3
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	91.32
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	90.78
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	90.2
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	89.62
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	88.61
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	88.41
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	87.97
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	87.08
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	87.05
d2qj2a1	91	Hepatocyte growth factor {Human (Homo sapiens) [Ta	86.8
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	85.97
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	85.68
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	84.08
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	83.11
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	82.71
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	81.72
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	80.32

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.35  E-value=1.6e-06  Score=64.08  Aligned_cols=82  Identities=11%  Similarity=0.143  Sum_probs=48.5

Q ss_pred             CCeeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeeccccCCCCeeeEEEEecCceEEEEEEecCCCcEEEEEEeecC
Q 023979           25 SPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTL  104 (274)
Q Consensus        25 s~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~L~~dG  104 (274)
                      +.|.|+|.|+.||++  +++++..++|.++......-..+.+...+.+  .+.+.+...............++++|+.||
T Consensus        28 ~~~~y~l~mQ~DGNL--VLy~~~~~vWssnt~~~~~~~~l~l~~dGnL--vL~d~~g~~vWsS~t~~~~~~~~l~Lq~DG  103 (119)
T d1b2pa_          28 GTHVYRFIMQTDCNL--VLYDNNNPIWATNTGGLGNGCRAVLQPDGVL--VVITNENVTVWQSPVAGKAGHYVLVLQPDR  103 (119)
T ss_dssp             TTEEEEEEECTTSCE--EEEETTEEEEECCCTTSCSSCEEEECTTSCE--EEECTTCCEEEECSCCCCSSCEEEEECTTS
T ss_pred             CCceEEEEECCCCcE--EEEECCeEEEEecCCCCCcceEEEEEeCCCE--EEECCCCcEEEECCCcCCCCceEEEEcCCC
Confidence            589999999999995  4578888999988643211111122222211  233333333222211222334689999999


Q ss_pred             CeEEEEE
Q 023979          105 YLVQRFT  111 (274)
Q Consensus       105 ~l~~~y~  111 (274)
                      +| ++|.
T Consensus       104 Nl-vlYg  109 (119)
T d1b2pa_         104 NV-VIYG  109 (119)
T ss_dssp             CE-EEEE
T ss_pred             CE-EEEC
Confidence            99 9984

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=97.86  E-value=1.1e-05  Score=59.50  Aligned_cols=81  Identities=11%  Similarity=0.102  Sum_probs=46.8

Q ss_pred             CCeeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeeccccCCCCeeeEEEEecCceEEEEEEecCCCcEEEEEEeecC
Q 023979           25 SPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTL  104 (274)
Q Consensus        25 s~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~L~~dG  104 (274)
                      ..|.|+|.|+.+|++  ++++...++|.++.-.........+...+ . +.+.+.+++.............++++|++||
T Consensus        33 ~~g~y~L~~q~DGNL--vL~~~~~~vW~s~t~~~~~~~~~~l~~~G-n-Lvl~d~~~~~lW~S~t~~~~~~~~l~Lq~DG  108 (120)
T d1dlpa2          33 QLSPYRLSMETDCNL--VLFDRDDRVWSTNTAGKGTGCRAVLQPNG-R-MDVLTNQNIAVWTSGNSRSAGRYVFVLQPDR  108 (120)
T ss_dssp             BCSSCEEEEETTTEE--EEEBTTBCCSCCCCCSSCSSCEEEEETTT-E-EEEEETTTEEEEECCCCCSSSCCEEEECSSS
T ss_pred             EcCCEEEEEcCCCcE--EEecCCcEEEEEccccCCCcEEEEEeCCe-e-EEEEcCCCCEEEEeCCCCCCCcEEEEECCCC
Confidence            679999999999985  55788889998764321111111222222 1 1223333333222111122234689999999


Q ss_pred             CeEEEE
Q 023979          105 YLVQRF  110 (274)
Q Consensus       105 ~l~~~y  110 (274)
                      +| ++|
T Consensus       109 nl-vlY  113 (120)
T d1dlpa2         109 NL-AIY  113 (120)
T ss_dssp             CE-EEE
T ss_pred             cE-EEe
Confidence            99 998

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=97.84  E-value=8.5e-05  Score=53.66  Aligned_cols=94  Identities=7%  Similarity=0.120  Sum_probs=53.7

Q ss_pred             CeeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeeccccCCCCeeeEEEEecCceEEEEEEecCCCcEEEEEEeecCC
Q 023979           26 PGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLY  105 (274)
Q Consensus        26 ~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~L~~dG~  105 (274)
                      .|.|+|.|+.||++  ++|....++|.++......-..+.+.....+  .+.+.. ..............++++|..||+
T Consensus        18 ~g~~~l~~q~DGNL--vly~~~~~vW~s~~~~~~~~~~l~l~~dGnL--vl~~~~-~~~w~s~t~~~~~~~~l~L~ddGN   92 (112)
T d1xd5a_          18 EGGYLFIIQNDCNL--VLYDNNRAVWASGTNGKASGCVLKMQNDGNL--VIYSGS-RAIWASNTNRQNGNYYLILQRDRN   92 (112)
T ss_dssp             ETTEEEEECTTSCE--EEEETTEEEEECCCTTSCSSEEEEECTTSCE--EEEETT-EEEEECCCCCSCCCCEEEECTTSC
T ss_pred             ECCEEEEEcCCCCE--EEEcCCcEEEEccCccCCCCcEEEEeccccE--EEEecC-CeEEEEeeccCCCceEEEEcCCCC
Confidence            38999999999985  4567888999987643211111122222211  122333 222221112223446899999999


Q ss_pred             eEEEEEEcCCCCceEEEEeecCCCC
Q 023979          106 LVQRFTWNKATQSWELYSNVPRDLC  130 (274)
Q Consensus       106 l~~~y~w~~~~~~W~~~~~~p~~~C  130 (274)
                      | ++|.-     ....+|+...+.|
T Consensus        93 l-vly~~-----~~~~~W~S~t~~~  111 (112)
T d1xd5a_          93 V-VIYDN-----SNNAIWATHTNVG  111 (112)
T ss_dssp             E-EEECT-----TSCEEEECCCCCC
T ss_pred             E-EEECC-----CCcEEecCCCccC
Confidence            9 99841     2346787766554

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=97.73  E-value=6.7e-05  Score=53.95  Aligned_cols=81  Identities=6%  Similarity=0.084  Sum_probs=47.1

Q ss_pred             CeeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeeccccCCCCeeeEEEEecCceEEEEEEecCCCcEEEEEEeecCC
Q 023979           26 PGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTLY  105 (274)
Q Consensus        26 ~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~L~~dG~  105 (274)
                      .|+|+|.|+.||++  ++|++..++|.++...........+.....+  .+.+.+...............++++|..||+
T Consensus        18 ng~~~l~~q~DGNL--vly~~~~~vW~s~~~~~~~~~~l~l~~~Gnl--vl~~~~g~~vWsS~t~~~~~~~~l~L~ddGN   93 (108)
T d1jpca_          18 YGSFVFIMQEDCNL--VLYDVDKPIWATNTGGLSRSCFLSMQTDGNL--VVYNPSNKPIWASNTGGQNGNYVCILQKDRN   93 (108)
T ss_dssp             ETTEEEEECTTSCE--EEEETTEEEEECCCTTSCSSCEEEECTTSCE--EEECTTCCEEEECCCCCSCSCEEEEECTTSC
T ss_pred             cCCEEEEECCCCeE--EEEeCCceeeEeCCCCCCCccEEEEeccceE--EEECCCccceEEccccCCCCcEEEEEcCCCC
Confidence            48999999999985  5678889999988643211111122222211  1233333332222112223446899999999


Q ss_pred             eEEEEE
Q 023979          106 LVQRFT  111 (274)
Q Consensus       106 l~~~y~  111 (274)
                      | ++|.
T Consensus        94 l-Vly~   98 (108)
T d1jpca_          94 V-VIYG   98 (108)
T ss_dssp             E-EEEE
T ss_pred             E-EEeC
Confidence            9 9984

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=97.31  E-value=0.00043  Score=49.58  Aligned_cols=81  Identities=9%  Similarity=0.026  Sum_probs=45.7

Q ss_pred             CeeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeec-cccCCCCeeeEEEEecCceEEEEEEecCCCcEEEEEEeecC
Q 023979           26 PGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSA-SSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTL  104 (274)
Q Consensus        26 ~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~L~~dG  104 (274)
                      .|.|+|.|+.||++  ++|....++|.+..-....... +.+.....+  .+.+.++.....-........++++|.+||
T Consensus        18 ~g~~~l~~q~dgnL--vl~~~~~~vW~ant~~~~~~~~~l~l~~dGnL--vl~~~~g~~vW~s~t~~~~~~~~l~L~ddG   93 (109)
T d1kj1a_          18 VEPYHFIMQEDCNL--VLYDHSTSVWASNTGILGKKGCKAVLQSDGNF--VVYDAEGRSLWASHSVRGNGNYVLVLQEDG   93 (109)
T ss_dssp             ETTEEEEECTTSCE--EEEETTEEEEECCCCCTTCCCCEEEECTTSCE--EEECSSSCEEEECCCCCCSSCCEEEECTTS
T ss_pred             eCCEEEEecCCCeE--EEEeCCEEEEEeCCCCCCceeEEEEEcCCceE--EEEeCCCcEEEEEeeECCCCCEEEEEeCCC
Confidence            48899999999985  4567888999976532111111 123222211  123333333222112222234689999999


Q ss_pred             CeEEEEE
Q 023979          105 YLVQRFT  111 (274)
Q Consensus       105 ~l~~~y~  111 (274)
                      +| ++|.
T Consensus        94 Nl-vly~   99 (109)
T d1kj1a_          94 NV-VIYG   99 (109)
T ss_dssp             CE-EEEC
T ss_pred             cE-EEEC
Confidence            99 9983

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=97.25  E-value=0.00011  Score=53.45  Aligned_cols=80  Identities=6%  Similarity=0.156  Sum_probs=44.3

Q ss_pred             CCeeEEEEEecCCCcEEEEEcCCeeEEEcCCCCCceeeccccCCCCeeeEEEEecCceEEEEEEecCCCcEEEEEEeecC
Q 023979           25 SPGNFIWAVERQDNPELIMWKGSRKFHRSGPWNGLRFSASSLRPNPVFNFGFVSNEVELYYKFDMRDKAAFQRIVMNQTL  104 (274)
Q Consensus        25 s~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~L~~dG  104 (274)
                      ..|.|+|.|+.||++  +++++..+||.++.-.... ....+...+-+.  +.+.+.+.............++++|++||
T Consensus        24 ~~g~~~l~~q~DGNL--vL~~~~~~vW~s~t~~~~~-~~l~l~~dGNLv--l~d~~~~~vWsS~t~~~~g~y~l~Lq~DG   98 (115)
T d1dlpa1          24 ELSSFRFTMQSDCNL--VLFDSDVRVWASNTAGATG-CRAVLQSDGLLV--ILTAQNTIRWSSGTKGSIGNYVLVLQPDR   98 (115)
T ss_dssp             CSTTEEEEECTTSCE--EEEESSSEEECCCCCSCSC-CBCCBCSSSCBC--CBCTTTCCSCCCCCCCCSSCCEEEECSSS
T ss_pred             EcCCEEEEECCCCeE--EEEcCCeeEEEcccCCCCc-eEEEEeccCCEE--EEccCCCEEEEcCCCCCCCCEEEEECCCC
Confidence            368899999999995  4577888999987532111 111222211111  22222222111111112234579999999


Q ss_pred             CeEEEE
Q 023979          105 YLVQRF  110 (274)
Q Consensus       105 ~l~~~y  110 (274)
                      +| ++|
T Consensus        99 Nl-vlY  103 (115)
T d1dlpa1          99 TV-TIY  103 (115)
T ss_dssp             CE-EEE
T ss_pred             cE-EEe
Confidence            99 998

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=95.78  E-value=0.0041  Score=44.69  Aligned_cols=36  Identities=19%  Similarity=0.438  Sum_probs=28.4

Q ss_pred             EEecCCCCCCCeeEEEEEecCCCcEEEEEcCCeeEEEcCC
Q 023979           16 TSWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGP   55 (274)
Q Consensus        16 ~Sw~s~~dps~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~   55 (274)
                      +-|.|.++.+.|.|.|.|++||+++  +|  +.++|.+|.
T Consensus        77 ~vWsS~t~~~~g~y~l~Lq~DGNlv--lY--~~~~Wssgt  112 (115)
T d1dlpa1          77 IRWSSGTKGSIGNYVLVLQPDRTVT--IY--GPGLWDSGT  112 (115)
T ss_dssp             CSCCCCCCCCSSCCEEEECSSSCEE--EE--CSEEEECSC
T ss_pred             EEEEcCCCCCCCCEEEEECCCCcEE--Ee--CCCeecCCC
Confidence            3488889999999999999999854  45  347898886

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.08  E-value=0.017  Score=31.68  Aligned_cols=32  Identities=34%  Similarity=0.725  Sum_probs=25.2

Q ss_pred             CCCCCCCCCCCCcccccC-CCCccccCCCceecC
Q 023979          128 DLCDTYALCGAYGICIIS-DMPVCQCLKGFKPKS  160 (274)
Q Consensus       128 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~GF~~~~  160 (274)
                      |.|.+-+.|| ||-|+.- ..-.|.|-.||+|..
T Consensus         2 dECsignpCG-nGTCtNviGgFec~C~~GFepgp   34 (39)
T d1emoa2           2 DECSVGNPCG-NGTCKNVIGGFECTCEEGFEPGP   34 (39)
T ss_dssp             CGGGTTCSSS-SSCEEECSSSEEECCSSSSCCCS
T ss_pred             CccccCCccC-CceeeecccceEEeecCCcCCCc
Confidence            6799999998 4778754 355799999999853

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.30  E-value=0.032  Score=32.16  Aligned_cols=31  Identities=35%  Similarity=0.738  Sum_probs=24.3

Q ss_pred             CCCCC-CCCCCCCcccccC-CCCccccCCCcee
Q 023979          128 DLCDT-YALCGAYGICIIS-DMPVCQCLKGFKP  158 (274)
Q Consensus       128 ~~C~~-~~~CG~~g~C~~~-~~~~C~C~~GF~~  158 (274)
                      |.|.. ...|..+|.|... ..-.|.|++||+-
T Consensus         4 deC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G   36 (42)
T d2vj3a1           4 DECSLGANPCEHAGKCINTLGSFECQCLQGYTG   36 (42)
T ss_dssp             CTTTSSSCSSSTTCEEEECSSSEEEECCTTEES
T ss_pred             ccccCCCCCCCCCcEeECCCCCEEeECCCCCcC
Confidence            56765 5689999999754 3568999999974

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=91.32  E-value=0.043  Score=39.31  Aligned_cols=38  Identities=8%  Similarity=0.104  Sum_probs=21.6

Q ss_pred             ecCCCCCCCeeEEEEEecCCCcEEEEEcC-CeeEEEcCCCC
Q 023979           18 WKSPDDPSPGNFIWAVERQDNPELIMWKG-SRKFHRSGPWN   57 (274)
Q Consensus        18 w~s~~dps~G~y~l~~~~~g~~~l~~~~~-~~~Yw~sg~w~   57 (274)
                      |.+.+.-......+.|+.+|+++  +++. ..+.|.|+...
T Consensus        57 W~s~t~~~~~~~~~~l~~~GnLv--l~d~~~~~lW~S~t~~   95 (120)
T d1dlpa2          57 WSTNTAGKGTGCRAVLQPNGRMD--VLTNQNIAVWTSGNSR   95 (120)
T ss_dssp             SCCCCCSSCSSCEEEEETTTEEE--EEETTTEEEEECCCCC
T ss_pred             EEEccccCCCcEEEEEeCCeeEE--EEcCCCCEEEEeCCCC
Confidence            55543322223567888778743  3444 46778877643

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=90.78  E-value=0.099  Score=37.26  Aligned_cols=37  Identities=5%  Similarity=0.010  Sum_probs=24.0

Q ss_pred             ecCCCCCCCeeEEEEEecCCCcEEEEEcC-CeeEEEcCCC
Q 023979           18 WKSPDDPSPGNFIWAVERQDNPELIMWKG-SRKFHRSGPW   56 (274)
Q Consensus        18 w~s~~dps~G~y~l~~~~~g~~~l~~~~~-~~~Yw~sg~w   56 (274)
                      |.+.+......-.+.++.+|++  +++++ ..++|+++..
T Consensus        52 Wssnt~~~~~~~~l~l~~dGnL--vL~d~~g~~vWsS~t~   89 (119)
T d1b2pa_          52 WATNTGGLGNGCRAVLQPDGVL--VVITNENVTVWQSPVA   89 (119)
T ss_dssp             EECCCTTSCSSCEEEECTTSCE--EEECTTCCEEEECSCC
T ss_pred             EEecCCCCCcceEEEEEeCCCE--EEECCCCcEEEECCCc
Confidence            7666553322356889988885  45565 4688987754

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.20  E-value=0.092  Score=29.64  Aligned_cols=31  Identities=35%  Similarity=0.783  Sum_probs=22.7

Q ss_pred             CCCCCCCCCCCCcccccC-CCCccccCCCceec
Q 023979          128 DLCDTYALCGAYGICIIS-DMPVCQCLKGFKPK  159 (274)
Q Consensus       128 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~GF~~~  159 (274)
                      |.|. ...|...|.|... ....|.|++||+-.
T Consensus         1 D~C~-~~PC~ngg~C~~~~~~y~C~C~~G~~G~   32 (39)
T d1xkba1           1 DQCE-TSPCQNQGKCKDGLGEYTCTCLEGFEGK   32 (39)
T ss_dssp             CTTT-TCCCCSSCEECCCSSSCCEECCTTEETT
T ss_pred             CcCC-CCCCCCCcEEECCCCCEEEECCCCCCcC
Confidence            3555 3678888889754 35789999999744

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=89.62  E-value=0.15  Score=35.50  Aligned_cols=37  Identities=14%  Similarity=0.219  Sum_probs=25.8

Q ss_pred             ecCCCC-CCCeeEEEEEecCCCcEEEEEcC-CeeEEEcCCC
Q 023979           18 WKSPDD-PSPGNFIWAVERQDNPELIMWKG-SRKFHRSGPW   56 (274)
Q Consensus        18 w~s~~d-ps~G~y~l~~~~~g~~~l~~~~~-~~~Yw~sg~w   56 (274)
                      |.+.++ |.....++.|+.+|++  ++++. ..+.|.++.-
T Consensus        41 W~ant~~~~~~~~~l~l~~dGnL--vl~~~~g~~vW~s~t~   79 (109)
T d1kj1a_          41 WASNTGILGKKGCKAVLQSDGNF--VVYDAEGRSLWASHSV   79 (109)
T ss_dssp             EECCCCCTTCCCCEEEECTTSCE--EEECSSSCEEEECCCC
T ss_pred             EEeCCCCCCceeEEEEEcCCceE--EEEeCCCcEEEEEeeE
Confidence            765554 5555677999999985  45664 4688998864

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.61  E-value=0.098  Score=30.15  Aligned_cols=32  Identities=22%  Similarity=0.558  Sum_probs=23.9

Q ss_pred             CCCCCCCCCCCCCcccccC-CCCccccCCCceec
Q 023979          127 RDLCDTYALCGAYGICIIS-DMPVCQCLKGFKPK  159 (274)
Q Consensus       127 ~~~C~~~~~CG~~g~C~~~-~~~~C~C~~GF~~~  159 (274)
                      .|.|.....| -.++|... +.-.|.|++||...
T Consensus         3 idEC~~~~~~-c~~~C~Nt~G~y~C~C~~Gy~l~   35 (43)
T d1uzka1           3 VNECLDPTTC-ISGNCVNTPGSYICDCPPDFELN   35 (43)
T ss_dssp             CCGGGSTTSS-BTSEEEEETTEEEEECCTTCEEC
T ss_pred             ccccCCCCcC-cCCEeECCCCCEEEecCCCCEEC
Confidence            3678776665 47899754 45679999999875

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.41  E-value=0.27  Score=27.83  Aligned_cols=30  Identities=30%  Similarity=0.666  Sum_probs=22.5

Q ss_pred             CCCCCCCCCCCCcccccC-CCCccccCCCceec
Q 023979          128 DLCDTYALCGAYGICIIS-DMPVCQCLKGFKPK  159 (274)
Q Consensus       128 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~GF~~~  159 (274)
                      |.|...+.|  ..+|... +.-.|.|++||...
T Consensus         2 dEC~~~~~C--~~~C~n~~Gsy~C~C~~Gy~L~   32 (41)
T d1i0ua2           2 DECQDPDTC--SQLCVNLEGGYKCQCEEGFQLD   32 (41)
T ss_dssp             CTTTTTTSC--SSCEECSSSCCEECCCTTEEEC
T ss_pred             ccCCCCCCC--CCEeECCCCCEEeECCCCCeEC
Confidence            678777777  4578754 46789999999875

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.97  E-value=0.12  Score=29.10  Aligned_cols=31  Identities=19%  Similarity=0.508  Sum_probs=23.0

Q ss_pred             CCCCCCCCCCCCcccccC-CCCccccCCCceec
Q 023979          128 DLCDTYALCGAYGICIIS-DMPVCQCLKGFKPK  159 (274)
Q Consensus       128 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~GF~~~  159 (274)
                      |.|. ...|...|.|... ..-.|.|++||.-.
T Consensus         2 d~C~-~~PC~n~g~C~~~~~~y~C~C~~G~~G~   33 (39)
T d2vj3a2           2 NECV-SNPCQNDATCLDQIGEFQCICMPGYEGV   33 (39)
T ss_dssp             CTTT-TCCCCSSCEEEECSSCEEEECCTTEESS
T ss_pred             cCCc-CCCCCCCCEEECCCCCEEEeCCCCCccC
Confidence            4564 3678889999754 45679999999754

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.08  E-value=0.23  Score=28.49  Aligned_cols=31  Identities=26%  Similarity=0.463  Sum_probs=23.4

Q ss_pred             CCCCCCCCCCCCCcccccC-CCCccccCCCcee
Q 023979          127 RDLCDTYALCGAYGICIIS-DMPVCQCLKGFKP  158 (274)
Q Consensus       127 ~~~C~~~~~CG~~g~C~~~-~~~~C~C~~GF~~  158 (274)
                      .|.|..+. |+.++.|... +.-.|.|++||+.
T Consensus         5 idEC~~~~-~~~~~~C~Nt~Gsy~C~C~~Gy~~   36 (43)
T d1emoa1           5 MDECKEPD-VCKHGQCINTDGSYRCECPFGYIL   36 (43)
T ss_dssp             CCSSSSTT-SCSSSCCCCCSSCCCCCCCTTEEE
T ss_pred             eeccCCcC-CCCCCEeECCCCCeEeECCCCccc
Confidence            47897654 4568899754 4678999999976

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.05  E-value=0.19  Score=29.04  Aligned_cols=31  Identities=29%  Similarity=0.735  Sum_probs=22.5

Q ss_pred             CCCCCCC-CCCCCcccccC-CCCccccCCCceec
Q 023979          128 DLCDTYA-LCGAYGICIIS-DMPVCQCLKGFKPK  159 (274)
Q Consensus       128 ~~C~~~~-~CG~~g~C~~~-~~~~C~C~~GF~~~  159 (274)
                      |.|.... .| .++.|... +.-.|.|++||+..
T Consensus         4 dEC~~~~~~C-~~~~C~Nt~Gsy~C~C~~Gy~~~   36 (44)
T d1lmja1           4 DECRISPDLC-GRGQCVNTPGDFECKCDEGYESG   36 (44)
T ss_dssp             CTTTTCSSTT-TTSCEEEETTEEEECCCSSEEEC
T ss_pred             cccCCCCCCC-CCCEeEcCCCCeEEeCCCCCccC
Confidence            6787644 45 47899754 46689999999864

>d2qj2a1 g.10.1.1 (A:36-126) Hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Hairpin loop containing domain-like
superfamily: Hairpin loop containing domain-like
family: Hairpin loop containing domain
domain: Hepatocyte growth factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.80  E-value=1.3  Score=29.51  Aligned_cols=54  Identities=19%  Similarity=0.310  Sum_probs=33.1

Q ss_pred             CceEEEeeecCCCC---ccceeeccCChHHHHHHHhcC----CceEEEEeccccCCCceeEeec
Q 023979          182 DGFIKFTAMKLPDA---TLSWVSKSMNLNECREKCLDN----SSCMAYTNSDIRGEGSGCAMWF  238 (274)
Q Consensus       182 ~~f~~l~~~~~p~~---~~~~~~~~~~~~~C~~~Cl~n----CsC~a~~~~~~~~~g~~C~~w~  238 (274)
                      +.|.+..++.+...   .........+.++|...|+++    -.|.+|.|..   ....|.+-.
T Consensus         5 ~dy~kt~~~~L~~~~~~~~~~~~~~~s~eeCA~rC~~~~~~~f~CrSF~y~~---~~~~C~Ls~   65 (91)
T d2qj2a1           5 HEFKKSAKTTLIKIDPALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDK---ARKQCLWFP   65 (91)
T ss_dssp             GGEEEETTEEEEECSTTCCCEEEECSCHHHHHHHHHTTTTCSSCCCEEEEET---TTTEEEEES
T ss_pred             HhhhhcCCceEeccCccccccccccCCHHHHHHHHHccCCCCceEEeEEEEC---CCCeEEEcc
Confidence            35666666553221   111111234789999999974    4699999973   233699854

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.97  E-value=0.13  Score=29.00  Aligned_cols=31  Identities=29%  Similarity=0.530  Sum_probs=23.7

Q ss_pred             CCCCCCCCCCCCCcccccC-CCCccccCCCcee
Q 023979          127 RDLCDTYALCGAYGICIIS-DMPVCQCLKGFKP  158 (274)
Q Consensus       127 ~~~C~~~~~CG~~g~C~~~-~~~~C~C~~GF~~  158 (274)
                      .|+|. ...|-..|.|... ....|.|++||+-
T Consensus         3 ~d~C~-~~PC~ngg~C~~~~~~y~C~C~~g~~G   34 (39)
T d1edmb_           3 GDQCE-SNPCLNGGSCKDDINSYECWCPFGFEG   34 (39)
T ss_dssp             CCTTT-TCCCCTTCEEEEETTEEEEECCTTCCS
T ss_pred             cccCC-CCCCCCCcEEEcCCCCEEEECCCCCCC
Confidence            36776 4779899999754 4568999999964

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=85.68  E-value=0.2  Score=34.83  Aligned_cols=38  Identities=8%  Similarity=0.219  Sum_probs=24.2

Q ss_pred             EecCCCCCCCeeEEEEEecCCCcEEEEEcC-CeeEEEcCCC
Q 023979           17 SWKSPDDPSPGNFIWAVERQDNPELIMWKG-SRKFHRSGPW   56 (274)
Q Consensus        17 Sw~s~~dps~G~y~l~~~~~g~~~l~~~~~-~~~Yw~sg~w   56 (274)
                      =|.+.++..-..-.+.++.+|++  ++++. ..+.|+++..
T Consensus        40 vW~s~~~~~~~~~~l~l~~~Gnl--vl~~~~g~~vWsS~t~   78 (108)
T d1jpca_          40 IWATNTGGLSRSCFLSMQTDGNL--VVYNPSNKPIWASNTG   78 (108)
T ss_dssp             EEECCCTTSCSSCEEEECTTSCE--EEECTTCCEEEECCCC
T ss_pred             eeEeCCCCCCCccEEEEeccceE--EEECCCccceEEcccc
Confidence            37666554322345888888874  45665 5688998754

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.08  E-value=0.26  Score=26.91  Aligned_cols=29  Identities=28%  Similarity=0.627  Sum_probs=21.1

Q ss_pred             CCCCCCCCCCCcccccC-CCCccccCCCcee
Q 023979          129 LCDTYALCGAYGICIIS-DMPVCQCLKGFKP  158 (274)
Q Consensus       129 ~C~~~~~CG~~g~C~~~-~~~~C~C~~GF~~  158 (274)
                      .|. .+.|-..|.|... ..-.|.|++||.-
T Consensus         2 ~C~-~~PC~ngg~C~~~~~~y~C~C~~g~~G   31 (35)
T d2vj3a3           2 ECA-SSPCLHNGRCLDKINEFQCECPTGFTG   31 (35)
T ss_dssp             TTT-TCCSTTTCEEEECSSCEEEECCTTEES
T ss_pred             CCC-CCCCCCCcEEECCCCCeEEECCCCCCC
Confidence            443 4668888889754 3567999999974

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=83.11  E-value=0.48  Score=32.83  Aligned_cols=38  Identities=18%  Similarity=0.388  Sum_probs=25.8

Q ss_pred             EecCCCCCCCeeEEEEEecCCCcEEEEEcCCeeEEEcCCC
Q 023979           17 SWKSPDDPSPGNFIWAVERQDNPELIMWKGSRKFHRSGPW   56 (274)
Q Consensus        17 Sw~s~~dps~G~y~l~~~~~g~~~l~~~~~~~~Yw~sg~w   56 (274)
                      =|.+.++.....-++.|+.+|++  +++++..+.|.++.-
T Consensus        40 vW~s~~~~~~~~~~l~l~~dGnL--vl~~~~~~~w~s~t~   77 (112)
T d1xd5a_          40 VWASGTNGKASGCVLKMQNDGNL--VIYSGSRAIWASNTN   77 (112)
T ss_dssp             EEECCCTTSCSSEEEEECTTSCE--EEEETTEEEEECCCC
T ss_pred             EEEccCccCCCCcEEEEeccccE--EEEecCCeEEEEeec
Confidence            37666555333346889999984  456777888887754

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.71  E-value=0.1  Score=29.90  Aligned_cols=31  Identities=29%  Similarity=0.637  Sum_probs=21.3

Q ss_pred             CCCCC-CCCCCCCcccccC-CCCccccCCCceec
Q 023979          128 DLCDT-YALCGAYGICIIS-DMPVCQCLKGFKPK  159 (274)
Q Consensus       128 ~~C~~-~~~CG~~g~C~~~-~~~~C~C~~GF~~~  159 (274)
                      |.|.. +..|. +++|... ++-.|.|++||.+.
T Consensus         3 dEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~l~   35 (42)
T d1lmja2           3 DECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS   35 (42)
T ss_dssp             CHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred             cccCCCCCCCC-CCEeECCCCCeEEeCCCCCeEC
Confidence            34433 45664 7899754 45679999999865

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.72  E-value=0.41  Score=28.73  Aligned_cols=28  Identities=29%  Similarity=0.674  Sum_probs=21.7

Q ss_pred             CCCCCCCCccccc--C-CCCccccCCCceec
Q 023979          132 TYALCGAYGICII--S-DMPVCQCLKGFKPK  159 (274)
Q Consensus       132 ~~~~CG~~g~C~~--~-~~~~C~C~~GF~~~  159 (274)
                      ..+.|-..|.|..  . ....|.|++||.-.
T Consensus        10 ~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~   40 (53)
T d3egfa_          10 YDGYCLNGGVCMHIESLDSYTCNCVIGYSGD   40 (53)
T ss_dssp             SSCCSCSSCEEEEESSSSCEEEECCTTCCSS
T ss_pred             CCCCCCCCcEeeccCCCCCeEeECCCCCcCC
Confidence            4678999999963  2 46789999999644

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.32  E-value=0.19  Score=27.90  Aligned_cols=31  Identities=29%  Similarity=0.657  Sum_probs=22.1

Q ss_pred             CCCCCCCCCCCCcccccC-CCCccccCCCceec
Q 023979          128 DLCDTYALCGAYGICIIS-DMPVCQCLKGFKPK  159 (274)
Q Consensus       128 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~GF~~~  159 (274)
                      |.|. .+.|-..|.|... ..-.|.|++||+-.
T Consensus         3 d~C~-~~PC~ngg~C~~~~~~y~C~C~~g~~G~   34 (37)
T d2c4fl1           3 DQCA-SSPCQNGGSCKDQLQSYICFCLPAFEGR   34 (37)
T ss_dssp             CGGG-GCCCCTTCEEEEETTEEEEECCTTEEST
T ss_pred             ccCC-CCCCCCCCEEECCCCCeEEECCCCCcCC
Confidence            4554 4668888888754 35679999999743