Citrus Sinensis ID: 024008

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270----
MRTVSRGMISNALRFSFSIPNILQLPISSVRTRSFGIRATKPKMGKNREEVENDNVIKSHPRVNKLQQLMHIESSGGWEKCWEEGLTPWDIGQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLAIGPRKGREKLGRWKRSVRHSLL
cccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccHHHHHHccccccccccccHHHHHHHHccccccccEEECccccHHHHHHHHcccccEEEEEccHHHHHHHHHHHccccccccEEEEEcccccccccccccEEEEccccccccHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccHHHHHHHHccccCEEEEEECccccccccccccCEEEEEEccccccc
********ISNALRFSFSIPNILQLPISSVRTRSFG*****************************LQQLMHIESSGGWEKCWEEGLTPWDIGQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLAIGPRKGREKLGRWKRSVR****
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MRTVSRGMISNALRFSFSIPNILQLPISSVRTRSFGIRATKPKMGKNREEVENDNVIKSHPRVNKLQQLMHIESSGGWEKCWEEGLTPWDIGQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLAIGPRKGREKLGRWKRSVRHSLL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable thiocyanate methyltransferase 2 S-adenosyl-L-methionine-dependent methyltransferase. Probably involved in glucosinolate metabolism and defense against phytopathogens. Highly reactive to thiocyanate (NCS(-)) derived from myrosinase-mediated hydrolysis of glucosinolates upon tissue damage (By similarity). Also accepts halid ions as substrates.probableQ93XC4
Probable thiol methyltransferase 2 S-adenosyl-L-methionine-dependent methyltransferase.probableQ6AWU6

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.1.-.-Transferring one-carbon groups.probable
2.1.1.-15-hydroxyprostaglandin-I dehydrogenase (NADP(+)).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3LCC, chain A
Confidence level:very confident
Coverage over the Query: 75-269
View the alignment between query and template
View the model in PyMOL