Citrus Sinensis ID: 024020

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270----
MENFPVISLENINGAERAAILEKINEACENWGFFEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALKLEKLAEELLDLLCENLGLEKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNLGPIATA
cccccEEEccccccccHHHHHHHHHHHHHHccEEEEEcccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccEEEEccccccccccccccccccccccccEEEEEEccccccEEEEEccEEEEcccccccEEEEcccEEEEEEccccccccccEEccccccccEEEEEEEccccccEEEccccccccccccccccccccHHHHHHHHHccccccccHHHHHHHHccccccccccccc
cccccEEEHHHcccHHHHHHHHHHHHHHHHccEEEEEccccHcEEEEEEcccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccEEEEccccccccccHHcccccccccccEEEEEcccccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEEEEcccccEEEEEEEEcccccEEEcccHHHcccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccc
MENFPVISLENINGAERAAILEKINEACEnwgffevndmdwestfyvrhlpqstinevpdlDEEYRKVMKEFALKLEKLAEELLDLLCENLGlekgylkkvfhgangptfgtkvsnyppcpkpdlikglrahtdaGGIILLFQDdkvsglqllkdgqwidvpplrhsIVVNLGDQievitngkyksVEHRVVsqtdgegrmslasfynpgsdaviypapallekeaekkqvypkfvfEDYMKLyvplkfqakeprFEAMKAVETnvnlgpiata
menfpvisleningAERAAILEKINEACENWGFFEVNDMDWESTFYVRHlpqstinevpdldEEYRKVMKEFALKLEKLAEELLDLLCENLGLEKGYLKKVFHGANGPtfgtkvsnyppCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEvitngkyksveHRVVSQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVetnvnlgpiata
MENFPVISLENINGAERAAILEKINEACENWGFFEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMkefalkleklaeelldllcenlglekGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNLGPIATA
*****VISLENINGAERAAILEKINEACENWGFFEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALKLEKLAEELLDLLCENLGLEKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVS*******MSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPRF******************
MENFPVISLENINGA***AILEKINEACENWGFFEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALKLEKLAEELLDLLCENLGLEKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVE****L*P****
MENFPVISLENINGAERAAILEKINEACENWGFFEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALKLEKLAEELLDLLCENLGLEKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNLGPIATA
*ENFPVISLENINGAERAAILEKINEACENWGFFEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALKLEKLAEELLDLLCENLGLEKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETN*********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MENFPVISLENINGAERAAILEKINEACENWGFFEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVxxxxxxxxxxxxxxxxxxxxxNLGLEKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNLGPIATA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query274 2.2.26 [Sep-21-2011]
Q9MB94319 1-aminocyclopropane-1-car N/A no 0.996 0.855 0.718 1e-130
Q08506319 1-aminocyclopropane-1-car N/A no 0.992 0.852 0.711 1e-128
Q08507320 1-aminocyclopropane-1-car N/A no 0.996 0.853 0.700 1e-126
Q04644318 1-aminocyclopropane-1-car N/A no 0.989 0.852 0.694 1e-125
Q08508319 1-aminocyclopropane-1-car N/A no 0.992 0.852 0.689 1e-125
Q8S932318 1-aminocyclopropane-1-car N/A no 0.992 0.855 0.707 1e-123
P31237319 1-aminocyclopropane-1-car N/A no 0.992 0.852 0.673 1e-123
P05116315 1-aminocyclopropane-1-car N/A no 0.981 0.853 0.687 1e-122
P24157316 1-aminocyclopropane-1-car N/A no 0.985 0.854 0.687 1e-122
P07920316 1-aminocyclopropane-1-car N/A no 0.981 0.851 0.676 1e-122
>sp|Q9MB94|ACCO_PRUMU 1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1 Back     alignment and function desciption
 Score =  466 bits (1198), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/320 (71%), Positives = 256/320 (80%), Gaps = 47/320 (14%)

Query: 1   MENFPVISLENINGAERAAILEKINEACENWGFFE------------------------- 35
           MENFP+I+LE +NG  R A +EKI +ACENWGFFE                         
Sbjct: 1   MENFPIINLEGLNGEGRKATMEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQC 60

Query: 36  --------------------VNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALK 75
                               VNDMDWESTFY+RHLP+S I+EVPDL+++YR VMKEFALK
Sbjct: 61  LEQRFKELVASKGLEAVKTEVNDMDWESTFYLRHLPKSNISEVPDLEDQYRNVMKEFALK 120

Query: 76  LEKLAEELLDLLCENLGLEKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 135
           LEKLAE+LLDLLCENLGLEKGYLKK F+G NGPTFGTKVSNYPPCP P+LIKGLRAHTDA
Sbjct: 121 LEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDA 180

Query: 136 GGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQT 195
           GG+ILLFQDDKVSGLQLLKDGQWIDVPP+RHSIV+NLGDQ+EVITNGKY+SVEHRV++QT
Sbjct: 181 GGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIAQT 240

Query: 196 DGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKK-QVYPKFVFEDYMKLYVPLKFQAKEP 254
           DG  RMS+ASFYNPGSDAVIYPAP L+EKEAE+K QVYPKFVFEDYMKLY  LKFQ KEP
Sbjct: 241 DGT-RMSIASFYNPGSDAVIYPAPTLVEKEAEEKNQVYPKFVFEDYMKLYAGLKFQPKEP 299

Query: 255 RFEAMKAVETNVNLGPIATA 274
           RFEAMKAVETN++L PIATA
Sbjct: 300 RFEAMKAVETNISLVPIATA 319

Prunus mume (taxid: 102107)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 7EC: .EC: 4
>sp|Q08506|ACCO1_PETHY 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1 Back     alignment and function description
>sp|Q08507|ACCO3_PETHY 1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1 Back     alignment and function description
>sp|Q04644|ACCO1_CUCME 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1 Back     alignment and function description
>sp|Q08508|ACCO4_PETHY 1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1 Back     alignment and function description
>sp|Q8S932|ACCO_DIOKA 1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1 Back     alignment and function description
>sp|P31237|ACCO_ACTDE 1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1 Back     alignment and function description
>sp|P05116|ACCO1_SOLLC 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2 Back     alignment and function description
>sp|P24157|ACCO4_SOLLC 1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1 Back     alignment and function description
>sp|P07920|ACCO2_SOLLC 1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query274
12232032319 ACC oxidase [Citrus sinensis] 1.0 0.858 0.852 1e-152
445588319 Pch313 protein 0.996 0.855 0.725 1e-130
343794776318 ACC oxidase 5 [Actinidia deliciosa] 0.996 0.858 0.724 1e-130
452090908335 1-aminocyclopropane-1-carboxylate oxidas 0.996 0.814 0.721 1e-130
7108577319 1-aminocyclopropane-1-carboxylate oxidas 0.996 0.855 0.721 1e-130
18496053319 ACC oxidase 1 [Fagus sylvatica] 0.996 0.855 0.728 1e-130
224129046319 1-aminocyclopropane-1-carboxylate [Popul 0.985 0.846 0.735 1e-129
148353859318 ACC oxidase 3 [Hevea brasiliensis] 0.985 0.849 0.731 1e-129
343794774318 ACC oxidase 5 [Actinidia chinensis] 0.996 0.858 0.717 1e-129
225447149326 PREDICTED: 1-aminocyclopropane-1-carboxy 0.996 0.837 0.717 1e-129
>gi|12232032|gb|AAG49361.1| ACC oxidase [Citrus sinensis] Back     alignment and taxonomy information
 Score =  542 bits (1396), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 272/319 (85%), Positives = 273/319 (85%), Gaps = 45/319 (14%)

Query: 1   MENFPVISLENINGAERAAILEKINEACENWGFFE------------------------- 35
           MENFPVISLENINGAERAAILEKINEACE WGFFE                         
Sbjct: 1   MENFPVISLENINGAERAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKC 60

Query: 36  --------------------VNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALK 75
                               VNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALK
Sbjct: 61  MEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALK 120

Query: 76  LEKLAEELLDLLCENLGLEKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 135
           LEKLAEELLDLLCENLG+EKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDA
Sbjct: 121 LEKLAEELLDLLCENLGIEKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 180

Query: 136 GGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQT 195
           GGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQT
Sbjct: 181 GGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQT 240

Query: 196 DGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPR 255
           DGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPR
Sbjct: 241 DGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPR 300

Query: 256 FEAMKAVETNVNLGPIATA 274
           FEAMKAVETNVNLGPIATA
Sbjct: 301 FEAMKAVETNVNLGPIATA 319

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|445588|prf||1909340A Pch313 protein Back     alignment and taxonomy information
>gi|343794776|gb|AEM62884.1| ACC oxidase 5 [Actinidia deliciosa] Back     alignment and taxonomy information
>gi|452090908|gb|AGF95124.1| 1-aminocyclopropane-1-carboxylate oxidase, partial [Prunus persica] Back     alignment and taxonomy information
>gi|7108577|gb|AAF36483.1|AF129073_1 1-aminocyclopropane-1-carboxylate oxidase [Prunus persica] gi|16588828|gb|AAL26910.1|AF319166_1 1-aminocyclopropane 1-carboxylic acid oxidase [Prunus persica] gi|452671|emb|CAA54449.1| 1-aminocyclopropane-1-carboxylate oxidase [Prunus persica] gi|3510500|gb|AAC33524.1| 1-aminocyclopropane-1-carboxylate oxidase [Prunus armeniaca] gi|33329720|gb|AAQ10260.1| 1-aminocyclopropane-1-carboxylate oxidase [Prunus persica] Back     alignment and taxonomy information
>gi|18496053|emb|CAD21844.1| ACC oxidase 1 [Fagus sylvatica] Back     alignment and taxonomy information
>gi|224129046|ref|XP_002320487.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] gi|118488512|gb|ABK96069.1| unknown [Populus trichocarpa] gi|222861260|gb|EEE98802.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] Back     alignment and taxonomy information
>gi|148353859|emb|CAN85571.1| ACC oxidase 3 [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|343794774|gb|AEM62883.1| ACC oxidase 5 [Actinidia chinensis] Back     alignment and taxonomy information
>gi|225447149|ref|XP_002275341.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 3 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query274
TAIR|locus:2205568323 EFE "ethylene-forming enzyme" 0.923 0.783 0.685 1.5e-106
TAIR|locus:2027099320 ACO2 "ACC oxidase 2" [Arabidop 0.897 0.768 0.631 7e-92
TAIR|locus:2008905320 AT1G12010 [Arabidopsis thalian 0.850 0.728 0.642 5.2e-81
TAIR|locus:2031422307 AT1G77330 [Arabidopsis thalian 0.839 0.749 0.459 6.1e-58
TAIR|locus:2050364310 ACO1 "ACC oxidase 1" [Arabidop 0.788 0.696 0.451 8.8e-57
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.733 0.541 0.352 1.5e-37
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.744 0.598 0.363 1.2e-35
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.529 0.416 0.445 2.4e-35
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.5 0.384 0.414 3.1e-35
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.441 0.346 0.475 9e-34
TAIR|locus:2205568 EFE "ethylene-forming enzyme" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 931 (332.8 bits), Expect = 1.5e-106, Sum P(2) = 1.5e-106
 Identities = 179/261 (68%), Positives = 209/261 (80%)

Query:    22 EKINEACENWGF----FEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXX 77
             E+  E+ +N G      EVND+DWESTFY++HLP S I++VPDLD++YR +M        
Sbjct:    63 ERFKESIKNRGLDSLRSEVNDVDWESTFYLKHLPVSNISDVPDLDDDYRTLMKDFAGKIE 122

Query:    78 XXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGG 137
                               GYLKKVF+G+  PTFGTKVSNYPPCP PDL+KGLRAHTDAGG
Sbjct:   123 KLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGG 182

Query:   138 IILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQTDG 197
             IILLFQDDKVSGLQLLKDG+W+DVPP++HSIVVNLGDQ+EVITNGKYKSVEHRV+SQTDG
Sbjct:   183 IILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDG 242

Query:   198 EGRMSLASFYNPGSDAVIYPAPALLEKEAEK--KQVYPKFVFEDYMKLYVPLKFQAKEPR 255
             EGRMS+ASFYNPGSD+VI+PAP L+ KEAEK  K+ YP+FVFEDYMKLY  +KFQAKEPR
Sbjct:   243 EGRMSIASFYNPGSDSVIFPAPELIGKEAEKEKKENYPRFVFEDYMKLYSAVKFQAKEPR 302

Query:   256 FEAMKAVETNV--NLGPIATA 274
             FEAMKA+ET V  N+GP+ATA
Sbjct:   303 FEAMKAMETTVANNVGPLATA 323
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009693 "ethylene biosynthetic process" evidence=ISS;TAS
GO:0071398 "cellular response to fatty acid" evidence=IEP
GO:0009620 "response to fungus" evidence=IEP
GO:0000165 "MAPK cascade" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009595 "detection of biotic stimulus" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0030003 "cellular cation homeostasis" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
GO:0043900 "regulation of multi-organism process" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
GO:0070838 "divalent metal ion transport" evidence=RCA
GO:0009815 "1-aminocyclopropane-1-carboxylate oxidase activity" evidence=ISS
TAIR|locus:2027099 ACO2 "ACC oxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008905 AT1G12010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031422 AT1G77330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050364 ACO1 "ACC oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P07920ACCO2_SOLLC1, ., 1, 4, ., 1, 7, ., 40.67600.98170.8512N/Ano
P31237ACCO_ACTDE1, ., 1, 4, ., 1, 7, ., 40.67390.99270.8526N/Ano
P31239ACCO_PEA1, ., 1, 4, ., 1, 7, ., 40.64460.98900.8548N/Ano
P31238ACCO1_DORSP1, ., 1, 4, ., 1, 7, ., 40.61410.98900.8287N/Ano
Q9ZQZ1ACCO_DENCR1, ., 1, 4, ., 1, 7, ., 40.60810.96710.8333N/Ano
P31528ACCO_DIACA1, ., 1, 4, ., 1, 7, ., 40.66250.97810.8348N/Ano
Q04644ACCO1_CUCME1, ., 1, 4, ., 1, 7, ., 40.69470.98900.8522N/Ano
Q00985ACCO1_MALDO1, ., 1, 4, ., 1, 7, ., 40.66140.98170.8566N/Ano
Q9MB94ACCO_PRUMU1, ., 1, 4, ., 1, 7, ., 40.71870.99630.8557N/Ano
P05116ACCO1_SOLLC1, ., 1, 4, ., 1, 7, ., 40.68750.98170.8539N/Ano
A2Z1W9ACCO1_ORYSI1, ., 1, 4, ., 1, 7, ., 40.62300.95980.8167N/Ano
Q08506ACCO1_PETHY1, ., 1, 4, ., 1, 7, ., 40.71150.99270.8526N/Ano
Q09052ACCO1_BRAJU1, ., 1, 4, ., 1, 7, ., 40.60630.96710.8281N/Ano
Q8S932ACCO_DIOKA1, ., 1, 4, ., 1, 7, ., 40.70750.99270.8553N/Ano
Q43792ACCO_TOBAC1, ., 1, 4, ., 1, 7, ., 40.68220.99270.8526N/Ano
P19464ACCO_PERAE1, ., 1, 4, ., 1, 7, ., 40.64900.98900.8468N/Ano
Q06588ACCO4_ARATH1, ., 1, 4, ., 1, 7, ., 40.67801.00.8482yesno
Q39705ACCO2_DORSP1, ., 1, 4, ., 1, 7, ., 40.61490.98900.8338N/Ano
O48882ACCO2_MALDO1, ., 1, 4, ., 1, 7, ., 40.65200.98170.8151N/Ano
P24157ACCO4_SOLLC1, ., 1, 4, ., 1, 7, ., 40.68750.98540.8544N/Ano
Q0J1C1ACCO1_ORYSJ1, ., 1, 4, ., 1, 7, ., 40.61980.95980.8167yesno
Q08507ACCO3_PETHY1, ., 1, 4, ., 1, 7, ., 40.70090.99630.8531N/Ano
Q08508ACCO4_PETHY1, ., 1, 4, ., 1, 7, ., 40.68960.99270.8526N/Ano
P54847ACCO3_CUCME1, ., 1, 4, ., 1, 7, ., 40.66350.98900.8468N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.14.11.4LOW CONFIDENCE prediction!
3rd Layer1.14.170.983
4th Layer1.14.11.11LOW CONFIDENCE prediction!
4th Layer1.14.17.40.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query274
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 0.0
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 1e-104
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 3e-63
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 2e-52
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 3e-48
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 4e-47
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-46
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-41
PLN02704335 PLN02704, PLN02704, flavonol synthase 5e-41
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 5e-40
PLN02216357 PLN02216, PLN02216, protein SRG1 8e-38
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 2e-37
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 8e-37
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 3e-35
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 7e-35
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 7e-34
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 5e-33
PLN02947374 PLN02947, PLN02947, oxidoreductase 2e-30
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-28
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-28
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 9e-27
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-24
PLN02485329 PLN02485, PLN02485, oxidoreductase 3e-21
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 6e-19
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 5e-17
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 3e-12
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 8e-07
PLN02947374 PLN02947, PLN02947, oxidoreductase 6e-05
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 7e-04
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information 
 Score =  542 bits (1398), Expect = 0.0
 Identities = 229/319 (71%), Positives = 256/319 (80%), Gaps = 46/319 (14%)

Query: 1   MENFPVISLENINGAERAAILEKINEACENWGFFE------------------------- 35
           ME+FPVI +E +NG ERAA +E I +ACENWGFFE                         
Sbjct: 4   MESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKC 63

Query: 36  --------------------VNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALK 75
                               V D+DWESTF++RHLP+S + ++PDLD+EYRKVMK+FAL+
Sbjct: 64  MEQRFKEMVASKGLEGVQTEVEDLDWESTFFLRHLPESNLADIPDLDDEYRKVMKDFALE 123

Query: 76  LEKLAEELLDLLCENLGLEKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 135
           LEKLAEELLDLLCENLGLEKGYLKK FHG+ GPTFGTKVSNYPPCPKPDL+KGLRAHTDA
Sbjct: 124 LEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPTFGTKVSNYPPCPKPDLVKGLRAHTDA 183

Query: 136 GGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQT 195
           GGIILLFQDDKVSGLQLLKDG+W+DVPP+RHSIVVNLGDQ+EVITNGKYKSV HRVV+QT
Sbjct: 184 GGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVVAQT 243

Query: 196 DGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPR 255
           DG  RMS+ASFYNPGSDAVIYPAPAL+EKEAE++QVYPKFVFEDYMKLY  LKFQAKEPR
Sbjct: 244 DGN-RMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLKFQAKEPR 302

Query: 256 FEAMKAVETNVNLGPIATA 274
           FEAMKA+ET VNL PIATA
Sbjct: 303 FEAMKAMETTVNLNPIATA 321

Length = 321
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 274
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02216357 protein SRG1 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02947374 oxidoreductase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02904357 oxidoreductase 100.0
PLN02997325 flavonol synthase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
PLN02485329 oxidoreductase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 98.88
PLN03176120 flavanone-3-hydroxylase; Provisional 98.39
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 95.56
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.17
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 93.99
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 88.57
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 88.24
TIGR02466201 conserved hypothetical protein. This family consis 80.17
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information 
Probab=100.00  E-value=1.4e-69  Score=496.48  Aligned_cols=273  Identities=83%  Similarity=1.373  Sum_probs=242.8

Q ss_pred             CCCCceeecCCCCChhHHHHHHHHHHHHHHcCcceeec------------------------------------------
Q 024020            1 MENFPVISLENINGAERAAILEKINEACENWGFFEVND------------------------------------------   38 (274)
Q Consensus         1 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~~~~------------------------------------------   38 (274)
                      |++||+|||+.+.+.++.+++++|++||++|||||+.|                                          
T Consensus         4 ~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~~~gy~~~~~~   83 (321)
T PLN02299          4 MESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMVASKGLEGVQTE   83 (321)
T ss_pred             CCCCCEEECcCCCcccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhcccCCCCccccccc
Confidence            57899999999876667889999999999999999443                                          


Q ss_pred             ---cccccceeeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhcCCCCCcccceee
Q 024020           39 ---MDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALKLEKLAEELLDLLCENLGLEKGYLKKVFHGANGPTFGTKVS  115 (274)
Q Consensus        39 ---~d~~e~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~  115 (274)
                         .||+|.|++...|..+.+.||+.+++||+.+++|+++|.+|+.+||++|+++||+++++|++.+.....+.+.+|++
T Consensus        84 ~~~~d~ke~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~  163 (321)
T PLN02299         84 VEDLDWESTFFLRHLPESNLADIPDLDDEYRKVMKDFALELEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPTFGTKVS  163 (321)
T ss_pred             CCCcCHHHHcccccCCccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCccceeeeE
Confidence               25677766654555556889998999999999999999999999999999999999999988775433245679999


Q ss_pred             ccCCCCCCCcCCCcccccCCCceEEEEecCCCCceEEEeCCeEEEecCCCCcEEEehhhHHHHHhCCcccccccccccCC
Q 024020          116 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQT  195 (274)
Q Consensus       116 ~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~~GLqV~~~g~W~~v~p~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~  195 (274)
                      |||||+.++...|+++|||+|+||||+||++++||||+++|+|++|+|.||++|||+||+||+||||+|||+.|||+.+.
T Consensus       164 ~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~kS~~HRVv~~~  243 (321)
T PLN02299        164 NYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVVAQT  243 (321)
T ss_pred             ecCCCCCcccccCccCccCCCeEEEEEecCCCCCcCcccCCeEEECCCCCCeEEEEeCHHHHHHhCCceecccceeecCC
Confidence            99999988878899999999999999997569999999899999999999999999999999999999999999999887


Q ss_pred             CCCCceEEEEeecCCCCceEecCcccccccccccCCCCCccHHHHHHHHhccccCCCchhhHhhhhhhhhcccCCCCCC
Q 024020          196 DGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNLGPIATA  274 (274)
Q Consensus       196 ~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (274)
                      ..+ |||++||++|+.|++|+|+++++++++++|++|+|++++||++.+.++....++.+++.+++.++-.+..|++|+
T Consensus       244 ~~~-R~Si~~F~~p~~d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (321)
T PLN02299        244 DGN-RMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKAMETTVNLNPIATA  321 (321)
T ss_pred             CCC-EEEEEEEecCCCCceEeCchHhcCcccCCCcCCCCCcHHHHHHHHHHcccCCccchhhhhhccccccccCccCCC
Confidence            767 999999999999999999999998653347899999999999999988888776789999999899999999885

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query274
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-107
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 7e-18
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 7e-18
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 3e-17
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 4e-08
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 9e-08
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure 
Iteration: 1

 Score =  384 bits (987), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/318 (62%), Positives = 217/318 (68%), Gaps = 47/318 (14%)
Query: 2   ENFPVISLENINGAERAAILEKINEACENWGFFE-------------------------- 35
           ENFP+ISL+ +NG ERAA  E I +ACENWGFFE                          
Sbjct: 2   ENFPIISLDKVNGVERAATXEXIKDACENWGFFELVNHGIPREVXDTVEKXTKGHYKKCX 61
Query: 36  -------------------VNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXX 76
                              V D DWESTF+++HLP S I+EVPDLDEEYR+V        
Sbjct: 62  EQRFKELVASKALEGVQAEVTDXDWESTFFLKHLPISNISEVPDLDEEYREVXRDFAKRL 121
Query: 77  XXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAG 136
                              GYLK  F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAG
Sbjct: 122 EKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAG 181
Query: 137 GIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQTD 196
           GIILLFQDDKVSGLQLLKDGQWIDVPP RHSIVVNLGDQ+EVITNGKYKSV HRV++Q D
Sbjct: 182 GIILLFQDDKVSGLQLLKDGQWIDVPPXRHSIVVNLGDQLEVITNGKYKSVXHRVIAQKD 241
Query: 197 GEGRMSLASFYNPGSDAVIYPAPALLEKEAEK-KQVYPKFVFEDYMKLYVPLKFQAKEPR 255
           G  R SLASFYNPGSDAVIYPAPAL+EKEAE+ KQVYPKFVF+DY KLY  LKFQAKEPR
Sbjct: 242 G-ARXSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYXKLYAGLKFQAKEPR 300
Query: 256 FEAMKAVETNVNLGPIAT 273
           FEA KA ET+V   PIAT
Sbjct: 301 FEAXKAXETDVKXDPIAT 318
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query274
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-147
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-115
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-57
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 6e-57
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 2e-52
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 3e-50
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 2e-04
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
 Score =  413 bits (1063), Expect = e-147
 Identities = 225/319 (70%), Positives = 251/319 (78%), Gaps = 47/319 (14%)

Query: 1   MENFPVISLENINGAERAAILEKINEACENWGFFEV------------------------ 36
           MENFP+ISL+ +NG ERAA +E I +ACENWGFFE+                        
Sbjct: 1   MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKC 60

Query: 37  ---------------------NDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALK 75
                                 DMDWESTF+++HLP S I+EVPDLDEEYR+VM++FA +
Sbjct: 61  MEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKR 120

Query: 76  LEKLAEELLDLLCENLGLEKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 135
           LEKLAEELLDLLCENLGLEKGYLK  F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDA
Sbjct: 121 LEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDA 180

Query: 136 GGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQT 195
           GGIILLFQDDKVSGLQLLKDGQWIDVPP+RHSIVVNLGDQ+EVITNGKYKSV HRV++Q 
Sbjct: 181 GGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQK 240

Query: 196 DGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKK-QVYPKFVFEDYMKLYVPLKFQAKEP 254
           DG  RMSLASFYNPGSDAVIYPAPAL+EKEAE+  QVYPKFVF+DYMKLY  LKFQAKEP
Sbjct: 241 DGA-RMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEP 299

Query: 255 RFEAMKAVETNVNLGPIAT 273
           RFEAMKA+ET+V + PIAT
Sbjct: 300 RFEAMKAMETDVKMDPIAT 318
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query274
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 94.84
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 88.29
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 88.04
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 85.94
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 82.54
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
Probab=100.00  E-value=5.4e-72  Score=511.42  Aligned_cols=273  Identities=82%  Similarity=1.352  Sum_probs=232.3

Q ss_pred             CCCCceeecCCCCChhHHHHHHHHHHHHHHcCcceeec------------------------------------------
Q 024020            1 MENFPVISLENINGAERAAILEKINEACENWGFFEVND------------------------------------------   38 (274)
Q Consensus         1 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~~~~------------------------------------------   38 (274)
                      |++||||||+.+.++++.+++++|++||++|||||+.|                                          
T Consensus         1 m~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~~Gy~~~~~e   80 (319)
T 1w9y_A            1 MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAE   80 (319)
T ss_dssp             -CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             CCCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCccccc
Confidence            78999999999876668899999999999999999432                                          


Q ss_pred             ---cccccceeeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhcCCCCCcccceee
Q 024020           39 ---MDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALKLEKLAEELLDLLCENLGLEKGYLKKVFHGANGPTFGTKVS  115 (274)
Q Consensus        39 ---~d~~e~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~  115 (274)
                         .||+|.|++...|....|.||+.+|+||+.+++|+++|.+|+.+||++|+++||+++++|.+.+....++.+.+|++
T Consensus        81 ~~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~  160 (319)
T 1w9y_A           81 VTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVS  160 (319)
T ss_dssp             GGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEE
T ss_pred             CCCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEE
Confidence               46888887766666567899999999999999999999999999999999999999999999886432255689999


Q ss_pred             ccCCCCCCCcCCCcccccCCCceEEEEecCCCCceEEEeCCeEEEecCCCCcEEEehhhHHHHHhCCcccccccccccCC
Q 024020          116 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQT  195 (274)
Q Consensus       116 ~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~~GLqV~~~g~W~~v~p~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~  195 (274)
                      |||||++++..+|+++|||+|+||||+||+.++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||+.++
T Consensus       161 ~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~  240 (319)
T 1w9y_A          161 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQK  240 (319)
T ss_dssp             ECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCS
T ss_pred             ecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCC
Confidence            99999998888999999999999999996569999999999999999999999999999999999999999999999988


Q ss_pred             CCCCceEEEEeecCCCCceEecCccccccccc-ccCCCCCccHHHHHHHHhccccCCCchhhHhhhhhhhhcccCCCCCC
Q 024020          196 DGEGRMSLASFYNPGSDAVIYPAPALLEKEAE-KKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNLGPIATA  274 (274)
Q Consensus       196 ~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~-~~~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (274)
                      ..+ |||++||++|+.|++|+|+++|++++.. +|++|++++++||++.+.++++.++..+++.+|+.++....+||+|+
T Consensus       241 ~~~-R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (319)
T 1w9y_A          241 DGA-RMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMETDVKMDPIATV  319 (319)
T ss_dssp             SSC-CEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC------------
T ss_pred             CCC-ceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHHhhhcccCCcccC
Confidence            777 9999999999999999999999986510 27899999999999999999998887779999999999999999986
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 274
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 9e-80
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 1e-45
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 2e-37
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 1e-26
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-05
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

 Score =  241 bits (615), Expect = 9e-80
 Identities = 220/308 (71%), Positives = 242/308 (78%), Gaps = 47/308 (15%)

Query: 2   ENFPVISLENINGAERAAILEKINEACENWGFF--------------------------- 34
           ENFP+ISL+ +NG ERAA +E I +ACENWGFF                           
Sbjct: 1   ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCM 60

Query: 35  ------------------EVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALKL 76
                             EV DMDWESTF+++HLP S I+EVPDLDEEYR+VM++FA +L
Sbjct: 61  EQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRL 120

Query: 77  EKLAEELLDLLCENLGLEKGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAG 136
           EKLAEELLDLLCENLGLEKGYLK  F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAG
Sbjct: 121 EKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAG 180

Query: 137 GIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQTD 196
           GIILLFQDDKVSGLQLLKDGQWIDVPP+RHSIVVNLGDQ+EVITNGKYKSV HRV++Q D
Sbjct: 181 GIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD 240

Query: 197 GEGRMSLASFYNPGSDAVIYPAPALLEKEAE-KKQVYPKFVFEDYMKLYVPLKFQAKEPR 255
           G  RMSLASFYNPGSDAVIYPAPAL+EKEAE  KQVYPKFVF+DYMKLY  LKFQAKEPR
Sbjct: 241 GA-RMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPR 299

Query: 256 FEAMKAVE 263
           FEAMKA+E
Sbjct: 300 FEAMKAME 307
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query274
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 92.01
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 84.4
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

Probab=100.00  E-value=3.1e-68  Score=481.61  Aligned_cols=259  Identities=84%  Similarity=1.376  Sum_probs=231.8

Q ss_pred             CCCceeecCCCCChhHHHHHHHHHHHHHHcCcceeec-------------------------------------------
Q 024020            2 ENFPVISLENINGAERAAILEKINEACENWGFFEVND-------------------------------------------   38 (274)
Q Consensus         2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~~~~-------------------------------------------   38 (274)
                      .+||||||+.+++.+|.+++++|++||+++||||+.|                                           
T Consensus         1 ~~lPvIDl~~~~~~~r~~~~~~l~~A~~~~GFF~l~nHGI~~~li~~~~~~~~~fF~lp~e~K~k~~~~~~~~~g~~~~~   80 (307)
T d1w9ya1           1 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEV   80 (307)
T ss_dssp             CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCG
T ss_pred             CCCCeEECcccCCcCHHHHHHHHHHHHHcCeEEEEEcCCCCHHHHHHHHHHHHHHHhCcHHHhhhhhcCCCCCcCccccc
Confidence            4799999999988889999999999999999999554                                           


Q ss_pred             --cccccceeeccCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhcCCCCCcccceeec
Q 024020           39 --MDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALKLEKLAEELLDLLCENLGLEKGYLKKVFHGANGPTFGTKVSN  116 (274)
Q Consensus        39 --~d~~e~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~  116 (274)
                        .||+|.|++...+..+.+.||+.+++||+.+++|++.|.+|+.+|+++|+++||+++++|.+.+....++.+.+|++|
T Consensus        81 ~~~d~~e~~~~~~~~~~~~~~~~~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lr~~~  160 (307)
T d1w9ya1          81 TDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSN  160 (307)
T ss_dssp             GGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEE
T ss_pred             cccChhhhcccccccccCcccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHhhhhccccccccceecC
Confidence              356677766655656677899999999999999999999999999999999999999999998865554667899999


Q ss_pred             cCCCCCCCcCCCcccccCCCceEEEEecCCCCceEEEeCCeEEEecCCCCcEEEehhhHHHHHhCCcccccccccccCCC
Q 024020          117 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQTD  196 (274)
Q Consensus       117 Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~~GLqV~~~g~W~~v~p~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~~  196 (274)
                      |||++.++...|+++|||+|+||||+|++.++||||+++|+|++|+|.+|++|||+||+||+||||+||||.|||+.++.
T Consensus       161 YP~~~~~~~~~g~~~HtD~~~lTlL~q~~~~ggl~~~~~g~Wi~v~p~~~~~vVnvGD~l~~~Tng~~kSt~HRVv~~~~  240 (307)
T d1w9ya1         161 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD  240 (307)
T ss_dssp             CCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSS
T ss_pred             CCCCcccccccccccccccceeEEeeccCCCCeEEEecCCcEEEeccCCCeEEEEcchhhHHhhCCcccCcCceeecCCC
Confidence            99999988889999999999999999987789999999999999999999999999999999999999999999999887


Q ss_pred             CCCceEEEEeecCCCCceEecCcccccccc-cccCCCCCccHHHHHHHHhccccCCCchhhHhhhh
Q 024020          197 GEGRMSLASFYNPGSDAVIYPAPALLEKEA-EKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKA  261 (274)
Q Consensus       197 ~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~-~~~~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~  261 (274)
                      .+ |||++||++|+.|++|+|+++|++... .+|++|+|||++||++.+.+.+++.|+++++.+|.
T Consensus       241 ~~-R~Si~~F~~p~~d~~i~p~~~~v~~~~~~~p~~y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~  305 (307)
T d1w9ya1         241 GA-RMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA  305 (307)
T ss_dssp             SC-CEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHH
T ss_pred             CC-cEEEEEEeeCCCCCEEeCCHHHhcccCccCCCCCCCeeHHHHHHHHHhccCCcccHHHHHhhc
Confidence            77 999999999999999999999997422 25899999999999999999999999999998874
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure