Citrus Sinensis ID: 024023
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 274 | 2.2.26 [Sep-21-2011] | |||||||
| Q09893 | 226 | Uncharacterized protein C | yes | no | 0.766 | 0.929 | 0.340 | 4e-20 | |
| P53078 | 280 | Suppressor of disruption | yes | no | 0.675 | 0.660 | 0.283 | 3e-16 | |
| P40025 | 321 | Phosphate metabolism prot | no | no | 0.678 | 0.579 | 0.278 | 2e-12 |
| >sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 110/241 (45%), Gaps = 31/241 (12%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 83
+ FDLD+ LYP S + I F S L I E R+ YR +G + GL +
Sbjct: 8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66
Query: 84 GYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQRK--IIFTNADQKHAMEVLGRL 140
+E D ++ V LP EK +K D VLR +LL + ++ IFTNA HA VL L
Sbjct: 67 HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126
Query: 141 GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANV-DP 199
G+EDCF DGI +++ ++ KP E E +R A V D
Sbjct: 127 GIEDCF-------------------DGITYCDYNAKD-LIAKPMPEMYERVMREAGVTDK 166
Query: 200 KKTIFFDDSARNIASAKAAGLHTVIV----GSSVPVPPA-DHALNSIHNIKEAIPEIWEG 254
K IF DDS NI A+ G + G +P P A H + IH K + EI +G
Sbjct: 167 DKCIFVDDSYGNILGAREFGWKYTVQLVEHGDPLPQPQAGSHVIRDIHKFKHLLDEI-DG 225
Query: 255 E 255
E
Sbjct: 226 E 226
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|P53078|SDT1_YEAST Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG 79
N + FD+D+ LY ST + +++I F HL + + + Y+E+G + G
Sbjct: 54 NLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRG 113
Query: 80 LKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQ-----RKIIFTNADQKHA 133
L + ++ + E++ V LP + LKPD LRN+LL + Q + +FTNA + HA
Sbjct: 114 L-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHA 172
Query: 134 MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 193
+ L LG+ D F DG+ +S ++CKP ++A E A++
Sbjct: 173 IRCLRLLGIADLF-------------------DGLTYCDYSRTDTLVCKPHVKAFEKAMK 213
Query: 194 IANVDPKKTIFF-DDSARNIASAKAAGLHTVI 224
+ + + +F DDS +NI + G+ T I
Sbjct: 214 ESGLARYENAYFIDDSGKNIETGIKLGMKTCI 245
|
Could be an enzyme that inactivates 6-azauracil by modifying it. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|P40025|PHM8_YEAST Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHM8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 26/212 (12%)
Query: 22 ECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLK 81
+ FD+D+TLY ST L ++++ F L D+ E R+ Y+E+G ++ GL
Sbjct: 53 KVFFFDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLI 112
Query: 82 AVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRN-------LLLSMPQRKIIFTNADQKHA 133
D +++ F+ LP + LKPD LR L + +FTN+ + HA
Sbjct: 113 KNKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHA 172
Query: 134 MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 193
+ + LG+ D F+GI P IE + +CKP + ETA
Sbjct: 173 IRCVKILGIADLFDGITYCHYDRP----------IE-------EEFICKPDPKFFETAKL 215
Query: 194 IANVDP-KKTIFFDDSARNIASAKAAGLHTVI 224
+ + F DD+ N+ SA + G+ VI
Sbjct: 216 QSGLSSFANAWFIDDNESNVRSALSMGMGHVI 247
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May be involved in phosphate metabolism. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 274 | ||||||
| 224068304 | 302 | predicted protein [Populus trichocarpa] | 0.985 | 0.894 | 0.710 | 1e-119 | |
| 224130792 | 261 | predicted protein [Populus trichocarpa] | 0.952 | 1.0 | 0.773 | 1e-117 | |
| 255548203 | 283 | catalytic, putative [Ricinus communis] g | 0.967 | 0.936 | 0.724 | 1e-114 | |
| 359807448 | 274 | uncharacterized protein LOC100814291 [Gl | 0.967 | 0.967 | 0.726 | 1e-110 | |
| 225437740 | 287 | PREDICTED: suppressor of disruption of T | 0.967 | 0.923 | 0.721 | 1e-109 | |
| 356572862 | 279 | PREDICTED: uncharacterized protein C24B1 | 0.963 | 0.946 | 0.685 | 1e-107 | |
| 388509590 | 257 | unknown [Medicago truncatula] | 0.919 | 0.980 | 0.708 | 1e-107 | |
| 356505699 | 279 | PREDICTED: uncharacterized protein C24B1 | 0.963 | 0.946 | 0.685 | 1e-106 | |
| 297744067 | 302 | unnamed protein product [Vitis vinifera] | 0.919 | 0.834 | 0.734 | 1e-104 | |
| 79456826 | 249 | haloacid dehalogenase-like hydrolase dom | 0.901 | 0.991 | 0.689 | 1e-99 |
| >gi|224068304|ref|XP_002302699.1| predicted protein [Populus trichocarpa] gi|222844425|gb|EEE81972.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/301 (71%), Positives = 234/301 (77%), Gaps = 31/301 (10%)
Query: 1 MGSLGPALKMDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDES 60
MGSLG LKMD GR YECLLFD+DDTLYPLS G N+ACR+NIEEFM LHI+ES
Sbjct: 1 MGSLGNLLKMDAAGRANGPKYECLLFDMDDTLYPLSLGLNMACRKNIEEFMLHQLHIEES 60
Query: 61 EVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQ 120
EVPRMCLELYREHGTTMAGLKA+GYEFDNDEFHAFVHG+LP E LKPDPVLRN+LLS+PQ
Sbjct: 61 EVPRMCLELYREHGTTMAGLKALGYEFDNDEFHAFVHGRLPCETLKPDPVLRNILLSVPQ 120
Query: 121 RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN---------- 170
RKIIFTNAD+ HA EVL R+GLEDCFEG+ICFET+NP L+ A+N D ++N
Sbjct: 121 RKIIFTNADKAHAAEVLKRMGLEDCFEGVICFETLNPPLENANNMDALDNDAVIAGGEPE 180
Query: 171 ---------------------NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA 209
N FSS RILCKPSLEAIE AI+IANVDPKKTIFFDDSA
Sbjct: 181 PSDFDGTAATGSKKILKNALDNGFSSKSRILCKPSLEAIEAAIQIANVDPKKTIFFDDSA 240
Query: 210 RNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVE 269
RNIAS KAAGLHTVIVGSSV VP AD+AL SIHNIKEAIPEIWE EGE++E VIQ VE
Sbjct: 241 RNIASGKAAGLHTVIVGSSVLVPGADNALRSIHNIKEAIPEIWEDEGEEMELVIQSTTVE 300
Query: 270 T 270
T
Sbjct: 301 T 301
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224130792|ref|XP_002320927.1| predicted protein [Populus trichocarpa] gi|222861700|gb|EEE99242.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/265 (77%), Positives = 226/265 (85%), Gaps = 4/265 (1%)
Query: 10 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 69
MDT R YECLLFD+DDTLYP+S G NLACR+NIEEFM LHI+ESEVPRMCLEL
Sbjct: 1 MDTAERANGPKYECLLFDMDDTLYPMSLGLNLACRKNIEEFMLHKLHIEESEVPRMCLEL 60
Query: 70 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 129
YREHGTTMAGLK +GYEFD+DEFHAFVHG+LPYE LKPDPVLRNLLLS+PQRKIIFTNAD
Sbjct: 61 YREHGTTMAGLKDLGYEFDDDEFHAFVHGRLPYETLKPDPVLRNLLLSLPQRKIIFTNAD 120
Query: 130 QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIE 189
+ HA EVL R+GLEDCFEG+IC+ET+NP L+ A+N D ++N++ RILCKPSLEAIE
Sbjct: 121 KAHAAEVLKRMGLEDCFEGVICYETLNPPLENANNMDALDNDA----SRILCKPSLEAIE 176
Query: 190 TAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP 249
AI+IANVDPKKTIFFDDSARNIAS KAAGL TVIVGSSV VP ADH L +IHNIKEAIP
Sbjct: 177 AAIQIANVDPKKTIFFDDSARNIASGKAAGLRTVIVGSSVLVPGADHGLRNIHNIKEAIP 236
Query: 250 EIWEGEGEQLEQVIQPAAVETAVLA 274
EIWE EGEQ EQVIQ AVET V A
Sbjct: 237 EIWEDEGEQSEQVIQSTAVETVVHA 261
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255548203|ref|XP_002515158.1| catalytic, putative [Ricinus communis] gi|223545638|gb|EEF47142.1| catalytic, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/283 (72%), Positives = 229/283 (80%), Gaps = 18/283 (6%)
Query: 10 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 69
M+ R YECLLFD+DDTLYP+S+G NLACR+NIEEFM HL+I+ESEVPRMCLEL
Sbjct: 1 MEAERRANELKYECLLFDMDDTLYPMSSGLNLACRKNIEEFMLHHLNIEESEVPRMCLEL 60
Query: 70 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 129
YRE+GTTMAGLKA+GYEFD+DEFHAF HG+LPYEKLKPDPVLRNLLLSMPQRKIIFTNAD
Sbjct: 61 YREYGTTMAGLKAIGYEFDDDEFHAFAHGRLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 120
Query: 130 QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF---------------- 173
+ HA EVL RLGLEDCFEGIICFET+NP L A+ D ++++
Sbjct: 121 KAHAAEVLQRLGLEDCFEGIICFETLNPPLGTANYMDALDDDEVLASGEPQHSDLDDADT 180
Query: 174 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP 233
+S RILCKPSLEA+E AIRIA+VDPK+TIFFDDS RNIAS KAAGLHTVIVGSSV VP
Sbjct: 181 NSKPRILCKPSLEAMEAAIRIADVDPKRTIFFDDSVRNIASGKAAGLHTVIVGSSVLVPG 240
Query: 234 ADHALNSIHNIKEAIPEIWEGEGEQLEQVI--QPAAVETAVLA 274
ADH L+SIHNIKEAIPEIWEGEGE LEQVI +AVE VLA
Sbjct: 241 ADHVLSSIHNIKEAIPEIWEGEGEHLEQVIPSSASAVEALVLA 283
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359807448|ref|NP_001241392.1| uncharacterized protein LOC100814291 [Glycine max] gi|255645771|gb|ACU23378.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/274 (72%), Positives = 223/274 (81%), Gaps = 9/274 (3%)
Query: 10 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 69
MDT RT YECLLFD+DDTLYPLS G NL CR+NI+E+M + LHI+ESEVP+MCL+L
Sbjct: 1 MDTSYRTGGVKYECLLFDMDDTLYPLSLGLNLFCRKNIQEYMLELLHIEESEVPKMCLDL 60
Query: 70 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 129
YRE+GTTMAGLK +GYEFDNDEFHA+VHG+LPYEKLKPDPVLRNLLLSMPQRKIIFTNAD
Sbjct: 61 YREYGTTMAGLKVLGYEFDNDEFHAYVHGRLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 120
Query: 130 QKHAMEVLGRLGLEDCFEGIICFETINPRLQ------PADN---TDGIENNSFSSNQRIL 180
HA++VL RLGLEDCFEGIICFET+NP Q P DN TD EN F+S+ +IL
Sbjct: 121 HAHAVKVLNRLGLEDCFEGIICFETLNPPKQINCMDVPNDNHVLTDLTENGCFNSHPQIL 180
Query: 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 240
CKPS+EA E AIRIANVDPKKTIFFDDS RN+ SAK GL+TV+VG S VP ADHALNS
Sbjct: 181 CKPSVEAFEAAIRIANVDPKKTIFFDDSVRNVESAKITGLNTVLVGHSDLVPGADHALNS 240
Query: 241 IHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA 274
IHNIKEA+PEIWE E +Q IQP VET VLA
Sbjct: 241 IHNIKEALPEIWEIEDGNQQQKIQPPTVETMVLA 274
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225437740|ref|XP_002280756.1| PREDICTED: suppressor of disruption of TFIIS-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/287 (72%), Positives = 231/287 (80%), Gaps = 22/287 (7%)
Query: 10 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 69
MD + + A YECLLFD+DDTLYP+S+G NLACR+NIE++M QHL+I+ESEVPRMCLEL
Sbjct: 1 MDAVEGSNRAKYECLLFDMDDTLYPMSSGLNLACRKNIEDYMLQHLNIEESEVPRMCLEL 60
Query: 70 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 129
YRE+GTTMAGLKA+GYEFD+DEFHA+VHG+LPYE LKPDPVLRNLLLSMPQRKIIFTNAD
Sbjct: 61 YREYGTTMAGLKALGYEFDDDEFHAYVHGRLPYESLKPDPVLRNLLLSMPQRKIIFTNAD 120
Query: 130 QKHAMEVLGRLGLEDCFEGIICFETINP--------------------RLQPADN-TDGI 168
++HA +VL RLGLE CFEG+ICFET+NP +P DN D
Sbjct: 121 REHAAQVLNRLGLEGCFEGVICFETLNPPPEPTEYNEELEGNGVCKEGASEPEDNAADMA 180
Query: 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 228
E+NSF ILCKPS+EAIE AIRIANVDPKKTIFFDDSARNI S KAAGLHTVIVGSS
Sbjct: 181 ESNSFRPRSPILCKPSVEAIEAAIRIANVDPKKTIFFDDSARNITSGKAAGLHTVIVGSS 240
Query: 229 VPVPPADHALNSIHNIKEAIPEIW-EGEGEQLEQVIQPAAVETAVLA 274
V VP ADHAL SIHNIKEA+PEIW EGEQLEQVIQ AVET VLA
Sbjct: 241 VLVPGADHALGSIHNIKEALPEIWEGEEGEQLEQVIQSTAVETVVLA 287
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356572862|ref|XP_003554584.1| PREDICTED: uncharacterized protein C24B11.05-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/280 (68%), Positives = 229/280 (81%), Gaps = 16/280 (5%)
Query: 10 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 69
MDT R Y+CLLFD+DDTLYPLSTG NLACR+NIEE+M +HLH++ESEVP++C++L
Sbjct: 1 MDTSRRIAGFKYDCLLFDMDDTLYPLSTGLNLACRKNIEEYMLKHLHMEESEVPKICVDL 60
Query: 70 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 129
YRE+GTTMAGLKA G+EFDNDEFHA+VHG+LPY+KLKPDPVLRNLL SMPQRKI+FTNAD
Sbjct: 61 YREYGTTMAGLKAFGHEFDNDEFHAYVHGRLPYKKLKPDPVLRNLLFSMPQRKIVFTNAD 120
Query: 130 QKHAMEVLGRLGLEDCFEGIICFETINP---RLQPADN------------TDGIENNSFS 174
Q HA +VL RLGL++CF+ IICFET+NP P DN + +EN F+
Sbjct: 121 QAHAHQVLNRLGLKECFDSIICFETLNPPNYTNVPTDNLALTWSNSFNKDCNQVENRCFN 180
Query: 175 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPA 234
S +ILCKPS+EAIE AI+IAN+DP+KT+FFDDSARNIAS KAAGL+TVIVG S VP A
Sbjct: 181 SKTQILCKPSVEAIEVAIQIANLDPRKTLFFDDSARNIASGKAAGLNTVIVGRSDLVPGA 240
Query: 235 DHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA 274
D+AL+SIHNIKEA+PEIWE EGE L+Q+IQ AVET VLA
Sbjct: 241 DYALSSIHNIKEALPEIWEVEGE-LQQMIQSPAVETMVLA 279
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388509590|gb|AFK42861.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/268 (70%), Positives = 215/268 (80%), Gaps = 16/268 (5%)
Query: 7 ALKMDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMC 66
+ KMDT R YECLLFD+DDTLYPLS G NLACR+NI+E+M +HLHI+ES+VP+MC
Sbjct: 6 SFKMDTQ-RIAGVKYECLLFDMDDTLYPLSLGINLACRKNIQEYMLEHLHIEESKVPKMC 64
Query: 67 LELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFT 126
L+LY EHGTTMAG+KA+GYEFDND+FHA+VHG+LPYEKLKPD VLRNLLLSMPQRKIIFT
Sbjct: 65 LDLYLEHGTTMAGMKALGYEFDNDDFHAYVHGRLPYEKLKPDFVLRNLLLSMPQRKIIFT 124
Query: 127 NADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLE 186
NAD HA+EVL RLGLEDCFEGIICFET+NP +S QRILCKPS+E
Sbjct: 125 NADHTHAIEVLSRLGLEDCFEGIICFETLNP---------------INSYQRILCKPSVE 169
Query: 187 AIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKE 246
A E AIRI NVDPKKTIFFDDS RN+AS K AGLHTVIVG S VP ADHALNSIHNI+E
Sbjct: 170 AFEAAIRIVNVDPKKTIFFDDSVRNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIRE 229
Query: 247 AIPEIWEGEGEQLEQVIQPAAVETAVLA 274
A+PEIWE E +Q+I+ AVE V A
Sbjct: 230 ALPEIWEVEECNQQQMIRSLAVEATVHA 257
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356505699|ref|XP_003521627.1| PREDICTED: uncharacterized protein C24B11.05-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/280 (68%), Positives = 228/280 (81%), Gaps = 16/280 (5%)
Query: 10 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 69
MDT R + Y+CLL D+DDTLYPLSTG NLACR+NIE +M +HL ++ESEVP++C++L
Sbjct: 1 MDTSRRISGFKYDCLLLDMDDTLYPLSTGLNLACRKNIEGYMLKHLLMEESEVPKLCVDL 60
Query: 70 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 129
YRE+GTTMAGLKA GYEFDNDEFHA+VHG+LPYEKLKPDPVLR+LLLSMPQRKI+FTNAD
Sbjct: 61 YREYGTTMAGLKAFGYEFDNDEFHAYVHGRLPYEKLKPDPVLRSLLLSMPQRKIVFTNAD 120
Query: 130 QKHAMEVLGRLGLEDCFEGIICFETINP---RLQPAD------------NTDGIENNSFS 174
Q HA +VL RLGL DCF+GIICFET+NP P D + + +E+ F+
Sbjct: 121 QAHAHQVLNRLGLNDCFDGIICFETLNPPNYTNVPTDTHLLTWSKSFNKDCNQVESGCFN 180
Query: 175 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPA 234
S +ILCKPS+EAIE AI+IANVDP+KT+FFDDSARNIAS KAAGL+TVIVG S VP A
Sbjct: 181 SKTQILCKPSVEAIEAAIQIANVDPRKTLFFDDSARNIASGKAAGLNTVIVGRSDLVPGA 240
Query: 235 DHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA 274
D+ALNSIHNIKEA+P+IWE EGE L+Q+IQ AVET VLA
Sbjct: 241 DYALNSIHNIKEALPKIWEVEGE-LQQMIQSPAVETMVLA 279
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297744067|emb|CBI37037.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/267 (73%), Positives = 221/267 (82%), Gaps = 15/267 (5%)
Query: 9 KMDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLE 68
KMD + + A YECLLFD+DDTLYP+S+G NLACR+NIE++M QHL+I+ESEVPRMCLE
Sbjct: 50 KMDAVEGSNRAKYECLLFDMDDTLYPMSSGLNLACRKNIEDYMLQHLNIEESEVPRMCLE 109
Query: 69 LYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNA 128
LYRE+GTTMAGLKA+GYEFD+DEFHA+VHG+LPYE LKPDPVLRNLLLSMPQRKIIFTNA
Sbjct: 110 LYREYGTTMAGLKALGYEFDDDEFHAYVHGRLPYESLKPDPVLRNLLLSMPQRKIIFTNA 169
Query: 129 DQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAI 188
D++HA +VL RLGLE CFEG+ICFET+NP +P + + +E N AI
Sbjct: 170 DREHAAQVLNRLGLEGCFEGVICFETLNPPPEPTEYNEELEGNG--------------AI 215
Query: 189 ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 248
E AIRIANVDPKKTIFFDDSARNI S KAAGLHTVIVGSSV VP ADHAL SIHNIKEA+
Sbjct: 216 EAAIRIANVDPKKTIFFDDSARNITSGKAAGLHTVIVGSSVLVPGADHALGSIHNIKEAL 275
Query: 249 PEIW-EGEGEQLEQVIQPAAVETAVLA 274
PEIW EGEQLEQVIQ AVET VLA
Sbjct: 276 PEIWEGEEGEQLEQVIQSTAVETVVLA 302
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79456826|ref|NP_191763.3| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|6899902|emb|CAB71911.1| putative protein [Arabidopsis thaliana] gi|38603864|gb|AAR24677.1| At3g62040 [Arabidopsis thaliana] gi|332646779|gb|AEE80300.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 184/267 (68%), Positives = 210/267 (78%), Gaps = 20/267 (7%)
Query: 10 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 69
MD G ANYECL FD+DDTLYPLS G NLACR NI+EFM L I+ESEVP++CL+L
Sbjct: 1 MDGFG----ANYECLFFDMDDTLYPLSIGINLACRNNIQEFMLNQLGIEESEVPKLCLDL 56
Query: 70 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 129
Y+E+GTTMAGLK +GYEFDNDEFH +VHG+LPYEKLKPDP+LRNLLLSMP RKIIFTNAD
Sbjct: 57 YKEYGTTMAGLKVMGYEFDNDEFHEYVHGRLPYEKLKPDPLLRNLLLSMPHRKIIFTNAD 116
Query: 130 QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIE 189
+ HA L RLGLEDCFEGIICFET+NP S SN +ILCKPS+EA E
Sbjct: 117 KAHATRALNRLGLEDCFEGIICFETLNP--------------SSDSNTQILCKPSVEAFE 162
Query: 190 TAIRIAN-VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 248
AIRIA+ VDP+KTIFFDDS RNIASAKA GL TV VG SV VP AD+AL+SIHNIKEAI
Sbjct: 163 AAIRIADIVDPRKTIFFDDSIRNIASAKATGLKTVFVGESVLVPGADYALSSIHNIKEAI 222
Query: 249 PEIWE-GEGEQLEQVIQPAAVETAVLA 274
P++WE + E+LE ++Q AAV T V A
Sbjct: 223 PDLWEDNKDEKLEPIVQQAAVATMVNA 249
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 274 | ||||||
| TAIR|locus:2079522 | 249 | AT3G62040 [Arabidopsis thalian | 0.883 | 0.971 | 0.701 | 8.1e-92 | |
| TAIR|locus:2185223 | 280 | AT5G02230 [Arabidopsis thalian | 0.952 | 0.932 | 0.516 | 6.1e-71 | |
| TAIR|locus:2148358 | 266 | AT5G59490 [Arabidopsis thalian | 0.912 | 0.939 | 0.542 | 3.3e-70 | |
| TAIR|locus:2148343 | 282 | AT5G59480 [Arabidopsis thalian | 0.934 | 0.907 | 0.511 | 5.5e-70 | |
| TAIR|locus:2045422 | 263 | AT2G32150 [Arabidopsis thalian | 0.810 | 0.844 | 0.465 | 1.2e-56 | |
| DICTYBASE|DDB_G0293862 | 249 | DDB_G0293862 "haloacid dehalog | 0.448 | 0.493 | 0.377 | 1.7e-27 | |
| POMBASE|SPAC24B11.05 | 226 | SPAC24B11.05 "pyrimidine 5'-nu | 0.456 | 0.553 | 0.403 | 8.2e-26 | |
| TIGR_CMR|SPO_1374 | 214 | SPO_1374 "pyrimidine 5'-nucleo | 0.536 | 0.686 | 0.281 | 2.6e-18 | |
| UNIPROTKB|G4MVR5 | 238 | MGG_01783 "Uncharacterized pro | 0.828 | 0.953 | 0.293 | 3.2e-17 | |
| SGD|S000003192 | 280 | SDT1 "Pyrimidine nucleotidase" | 0.675 | 0.660 | 0.292 | 3.7e-16 |
| TAIR|locus:2079522 AT3G62040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
Identities = 181/258 (70%), Positives = 207/258 (80%)
Query: 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA 78
ANYECL FD+DDTLYPLS G NLACR NI+EFM L I+ESEVP++CL+LY+E+GTTMA
Sbjct: 6 ANYECLFFDMDDTLYPLSIGINLACRNNIQEFMLNQLGIEESEVPKLCLDLYKEYGTTMA 65
Query: 79 GLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLG 138
GLK +GYEFDNDEFH +VHG+LPYEKLKPDP+LRNLLLSMP RKIIFTNAD+ HA L
Sbjct: 66 GLKVMGYEFDNDEFHEYVHGRLPYEKLKPDPLLRNLLLSMPHRKIIFTNADKAHATRALN 125
Query: 139 RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN-V 197
RLGLEDCFEGIICFET+NP S SN +ILCKPS+EA E AIRIA+ V
Sbjct: 126 RLGLEDCFEGIICFETLNP--------------SSDSNTQILCKPSVEAFEAAIRIADIV 171
Query: 198 DPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE-GEG 256
DP+KTIFFDDS RNIASAKA GL TV VG SV VP AD+AL+SIHNIKEAIP++WE +
Sbjct: 172 DPRKTIFFDDSIRNIASAKATGLKTVFVGESVLVPGADYALSSIHNIKEAIPDLWEDNKD 231
Query: 257 EQLEQVIQPAAVETAVLA 274
E+LE ++Q AAV T V A
Sbjct: 232 EKLEPIVQQAAVATMVNA 249
|
|
| TAIR|locus:2185223 AT5G02230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 141/273 (51%), Positives = 192/273 (70%)
Query: 14 GRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREH 73
G T+ Y+CLLFDLDDTLYPLS+G C NI+++M++ L I + ++ + LY+ +
Sbjct: 8 GLATSQKYDCLLFDLDDTLYPLSSGIARECGNNIKDYMTEKLGIPKDKIVELSDLLYKNY 67
Query: 74 GTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHA 133
GTTMAGL+A+GYEFD DE+H+FVHG+LPY+ +KPD VLR+LLLS+P RK+IFTNAD+ HA
Sbjct: 68 GTTMAGLRAIGYEFDYDEYHSFVHGRLPYDNIKPDLVLRSLLLSLPLRKVIFTNADRVHA 127
Query: 134 MEVLGRLGLEDCFEGIICFETIN-PRLQPADNTDGIEN--NSFSSNQRI--------LCK 182
+ L +LGLEDCFEGIICFET+N A N I + F+ ++ + +CK
Sbjct: 128 AKALKKLGLEDCFEGIICFETLNLMHTNAASNNSEIFDIVGHFNRSEPVGSLPKTPVVCK 187
Query: 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIH 242
PS AIE A+ IAN+DP +T+FF+DS RN+ + K GL+TV+VG S V AD+AL +IH
Sbjct: 188 PSESAIEKALEIANIDPNRTLFFEDSVRNVQAGKRVGLYTVLVGKSTKVKGADYALENIH 247
Query: 243 NIKEAIPEIWEGEGEQLEQVIQ-PAAVETAVLA 274
N+KEAIPE+WE + + + AVET+V A
Sbjct: 248 NMKEAIPELWESDRKSSDVGYSGKVAVETSVRA 280
|
|
| TAIR|locus:2148358 AT5G59490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 141/260 (54%), Positives = 184/260 (70%)
Query: 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL 80
YECLLFDLDDTLYPLS+G + AC NI E+M + L IDE V + LY+++GT+MAGL
Sbjct: 11 YECLLFDLDDTLYPLSSGLSDACSNNIIEYMVEKLGIDEDGVVELNQILYKKYGTSMAGL 70
Query: 81 KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL 140
KAVGYEFDNDE+H +VHG+LPYE LKPDPVLR+LLL +P RK++F+N D+ H M+ L RL
Sbjct: 71 KAVGYEFDNDEYHRYVHGRLPYENLKPDPVLRSLLLGLPLRKLVFSNGDEVHVMKALTRL 130
Query: 141 GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 200
G+EDCFE II FET+NP + A+ + N ++CKP+ A E A IA ++P
Sbjct: 131 GIEDCFERIISFETLNPDINEAELS--CVTGHLPENP-VICKPTEIAFEKAFDIAQLNPH 187
Query: 201 KTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG------ 254
KT+FFDDS RNI + KA GLHTV+VG S + +D+AL SIHN+KEA PE+W
Sbjct: 188 KTLFFDDSTRNIQTGKAVGLHTVLVGKSEKIDGSDYALESIHNMKEAFPELWSESIINNK 247
Query: 255 EGEQLEQVIQPAAVETAVLA 274
E E+++ Q ++ET+V A
Sbjct: 248 ETERIDYASQ-ISIETSVQA 266
|
|
| TAIR|locus:2148343 AT5G59480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 139/272 (51%), Positives = 192/272 (70%)
Query: 15 RTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHG 74
+T+ A Y+CLLFD+DDTLYPLS+G + ++NI+E+M Q L I+E +V +CL LY+ +G
Sbjct: 9 QTSEAKYDCLLFDIDDTLYPLSSGLAMEVKKNIQEYMVQKLGIEEDKVQELCLSLYKIYG 68
Query: 75 TTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAM 134
TTMAGLKAVGY+FD D+FH FVHG+LPY LKPDP+LRN++LS+P RK++FTNAD+ HA
Sbjct: 69 TTMAGLKAVGYDFDYDDFHRFVHGRLPYSTLKPDPILRNIILSLPIRKVVFTNADKAHAA 128
Query: 135 EVLGRLGLEDCFEGIICFETINPRLQ---PADN-TDGI-ENNSFSSNQ---------RIL 180
+++ RLGLE CFE II FET+NP + P D T I + S+ +N ++
Sbjct: 129 KIIARLGLEGCFEKIISFETLNPITKTESPVDTKTREIFDIISYMANPDSSIELPKTSVV 188
Query: 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 240
CKPS A E ++AN++PKKT+FFDDS RNI + K GLHTV VG+S D AL
Sbjct: 189 CKPSEGAFEQVFKMANINPKKTLFFDDSIRNIQTGKRVGLHTVWVGTSHREEGVDIALEH 248
Query: 241 IHNIKEAIPEIWEGEGEQLEQVI--QPAAVET 270
IHNI+EA+P++W+ ++ +++ Q A+ET
Sbjct: 249 IHNIREALPQLWDAVDDKAKEIRTRQKVAIET 280
|
|
| TAIR|locus:2045422 AT2G32150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 107/230 (46%), Positives = 161/230 (70%)
Query: 23 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA 82
CL+FDLDDTLYPL TG A ++NI++F+ + ES+ + +EL++ +G+T+AGL+A
Sbjct: 8 CLIFDLDDTLYPLKTGIAPAVKKNIDDFLVEKFGFSESKASSLRVELFKTYGSTLAGLRA 67
Query: 83 VGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGL 142
+G++ DE+H+FVHG+LPY ++P+ LRNLL + QRKIIFTN+D+ HA++VL +LGL
Sbjct: 68 LGHDVHPDEYHSFVHGRLPYGSIEPNNKLRNLLNKIKQRKIIFTNSDKNHAVKVLKKLGL 127
Query: 143 EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKT 202
EDCFE +ICFET+NP L + + ++ KPSL A++ IR+ANVDP++T
Sbjct: 128 EDCFEEMICFETMNPNL--------FGSTTRPDEYPVVLKPSLTAMDICIRVANVDPRRT 179
Query: 203 IFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 252
+F DD+ NI + K+ GL T++VG + AD+A+ ++ I A+PEIW
Sbjct: 180 VFLDDNIHNITAGKSVGLRTILVGRAEKTKDADYAVETVTEIATAVPEIW 229
|
|
| DICTYBASE|DDB_G0293862 DDB_G0293862 "haloacid dehalogenase-like hydrolase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 201 (75.8 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 48/127 (37%), Positives = 72/127 (56%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 83
LLFDLD+TLYP S G I ++MS L++ EV ++ Y+ +G T+ GL +
Sbjct: 24 LLFDLDNTLYPKSCGLAAQVSNRITQYMSIILNLPMEEVDKVRNHYYKTYGLTLKGLM-M 82
Query: 84 GYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQ--RKIIFTNADQKHAMEVLGRL 140
+E + D++ +VHG L + LKPD L L S+ +K+IF+NAD H V L
Sbjct: 83 NHEVNIDKYLDYVHGGLDLKSHLKPDARLHACLKSVKSGVKKVIFSNADIGHCKRVTREL 142
Query: 141 GLEDCFE 147
++DCF+
Sbjct: 143 EIDDCFD 149
|
|
| POMBASE|SPAC24B11.05 SPAC24B11.05 "pyrimidine 5'-nucleotidase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 194 (73.4 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 52/129 (40%), Positives = 69/129 (53%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 83
+ FDLD+ LYP S + I F S L I E R+ YR +G + GL +
Sbjct: 8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66
Query: 84 GYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQR-KI-IFTNADQKHAMEVLGRL 140
+E D ++ V LP EK +K D VLR +LL + ++ K IFTNA HA VL L
Sbjct: 67 HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126
Query: 141 GLEDCFEGI 149
G+EDCF+GI
Sbjct: 127 GIEDCFDGI 135
|
|
| TIGR_CMR|SPO_1374 SPO_1374 "pyrimidine 5'-nucleotidase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 163 (62.4 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 42/149 (28%), Positives = 73/149 (48%)
Query: 13 MGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYRE 72
M R ++ +FDLD+TLYP + + ++ + L + +E R+ +R+
Sbjct: 1 MVREAFSHVTTWVFDLDNTLYPPAMRLFDQIEVRMTAYVMEALGVTRAEADRLRAHYWRQ 60
Query: 73 HGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKH 132
+GTT+AGL + D D + VH ++ + PD L + + ++P R+I++TN +
Sbjct: 61 YGTTLAGLMRE-HGLDPDPYLVAVH-EVDMSHMTPDTALASHIRALPGRRIVYTNGSAPY 118
Query: 133 AMEVLGRLGLEDCFEGIICFETINPRLQP 161
A VL GL F+ I E R +P
Sbjct: 119 AERVLAARGLTGLFDAIYGVEHAGYRPKP 147
|
|
| UNIPROTKB|G4MVR5 MGG_01783 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 77/262 (29%), Positives = 121/262 (46%)
Query: 1 MGSLGPALKMDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDES 60
MGS G L D + R + FD+D+ LYP S + I+++ ++HL +
Sbjct: 1 MGSNG--LSTDGVDRHPT---KIFFFDIDNCLYPKSAKVHDRMADLIDKYFAEHLSLSWD 55
Query: 61 EVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKL-KPDPVLRNLLLSMP 119
E R+ E Y+ +G + GL ++ D E+++ V LP E + KP+P LR +L +
Sbjct: 56 EAVRLHKEYYQNYGLAIEGLVR-HHQIDPLEYNSKVDDALPLEGIIKPNPQLRKMLEDID 114
Query: 120 QRKI---IFTNADQKHAMEVLGRLGLEDCFEGII-CFETINPRLQPADNTDGIENNSFSS 175
+ K+ +FTNA HA V+ L +ED F+GI C P L + D N
Sbjct: 115 RSKVKLWLFTNAYVNHARRVVRLLEIEDLFDGITYCDYAAQP-LVCKPHEDAFAN----- 168
Query: 176 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV-IVGSSVPVP-- 232
A+ A + NVD F DD+ +N A G HT +V V VP
Sbjct: 169 -----------AMRDA-GVENVDD--CYFVDDNYQNCRKANEIGWHTAHLVEEGVKVPRT 214
Query: 233 PAD-HALNSIHNIKEAIPEIWE 253
PA H + S+ ++ P++++
Sbjct: 215 PASKHQIRSLEELRNVFPDVFK 236
|
|
| SGD|S000003192 SDT1 "Pyrimidine nucleotidase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 62/212 (29%), Positives = 103/212 (48%)
Query: 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG 79
N + FD+D+ LY ST + +++I F HL + + + Y+E+G + G
Sbjct: 54 NLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRG 113
Query: 80 LKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQR-KI----IFTNADQKHA 133
L + ++ + E++ V LP + LKPD LRN+LL + Q KI +FTNA + HA
Sbjct: 114 L-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHA 172
Query: 134 MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 193
+ L LG+ D F DG+ +S ++CKP ++A E A++
Sbjct: 173 IRCLRLLGIADLF-------------------DGLTYCDYSRTDTLVCKPHVKAFEKAMK 213
Query: 194 IANVDPKKTIFF-DDSARNIASAKAAGLHTVI 224
+ + + +F DDS +NI + G+ T I
Sbjct: 214 ESGLARYENAYFIDDSGKNIETGIKLGMKTCI 245
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.1.3.68 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 274 | |||
| TIGR01993 | 183 | TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti | 7e-92 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 4e-30 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 1e-22 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 7e-22 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 2e-16 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 7e-12 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 8e-11 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 1e-08 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 1e-07 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 2e-07 | |
| PRK13222 | 226 | PRK13222, PRK13222, phosphoglycolate phosphatase; | 4e-05 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 3e-04 | |
| PLN02940 | 382 | PLN02940, PLN02940, riboflavin kinase | 4e-04 | |
| PRK09456 | 199 | PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Pro | 6e-04 | |
| COG0647 | 269 | COG0647, NagD, Predicted sugar phosphatases of the | 0.004 |
| >gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Score = 269 bits (689), Expect = 7e-92
Identities = 104/204 (50%), Positives = 132/204 (64%), Gaps = 21/204 (10%)
Query: 22 ECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLK 81
+ FDLD+TLYP S G L RNI EF++ L + E + + Y+E+GTT+AGL
Sbjct: 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSPEEARVLRKDYYKEYGTTLAGLM 60
Query: 82 AVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLG 141
+ +E D DE+ +VHG+LPY+KLKPDP LRNLLL +P RKIIFTN D+ HA L RLG
Sbjct: 61 IL-HEIDADEYLRYVHGRLPYDKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALRRLG 119
Query: 142 LEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKK 201
+EDCF+GI CF+T NP L L KPS +A E A+R A VDP++
Sbjct: 120 IEDCFDGIFCFDTANPDL--------------------LPKPSPQAYEKALREAGVDPER 159
Query: 202 TIFFDDSARNIASAKAAGLHTVIV 225
IFFDDSARNIA+ KA G+ TV+V
Sbjct: 160 AIFFDDSARNIAAGKALGMKTVLV 183
|
This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 4e-30
Identities = 53/207 (25%), Positives = 81/207 (39%), Gaps = 34/207 (16%)
Query: 23 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYR-EHGTTMAGLK 81
+LFDLD L + R + L + E + L ++ ++G TM+
Sbjct: 1 AVLFDLDGVLVDTAHAIAKLVDRAEFPLVPDELGVSEVGSLELALRRWKAKYGRTMSAED 60
Query: 82 AVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQR---KIIFTNADQKHAMEVLG 138
A F LKP P +R LL ++ R + TN+ + A VL
Sbjct: 61 AQLLYK-----QLFYEALEKEG-LKPLPGVRALLEALRARGKKLALLTNSPRADAKLVL- 113
Query: 139 RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD 198
LGL F+ +I S+ L KP + A++ +
Sbjct: 114 ELGLRALFDVVID-----------------------SSDVGLGKPDPDIYLQALKKLGLK 150
Query: 199 PKKTIFFDDSARNIASAKAAGLHTVIV 225
P + +F DDS I +AKAAG+HTV+V
Sbjct: 151 PSECLFVDDSPAGIDAAKAAGMHTVLV 177
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 1e-22
Identities = 43/208 (20%), Positives = 82/208 (39%), Gaps = 38/208 (18%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA- 82
++FDLD TL F+ + + ++ L +D S + +A L
Sbjct: 1 IIFDLDGTLID----FDPVIFEALRDLAAERLGLDISAE-ELREAGGLPFDEALADLLRE 55
Query: 83 --VGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQ---RKIIFTNADQKHAMEVL 137
+ + + + +L+P P + LL + + +I +N ++ +L
Sbjct: 56 HPIDPDEILEALLEY----NLESRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLL 111
Query: 138 GRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANV 197
+LGL D F+ + + + R KP EA E + +
Sbjct: 112 EKLGLLDLFDAVFTSDDVGAR-----------------------KPDPEAYERVLERLGL 148
Query: 198 DPKKTIFFDDSARNIASAKAAGLHTVIV 225
P++ +F DDS ++ +A+AAG+ TV V
Sbjct: 149 PPEEILFIDDSPEDLEAARAAGIKTVHV 176
|
Length = 176 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 90.7 bits (225), Expect = 7e-22
Identities = 57/243 (23%), Positives = 86/243 (35%), Gaps = 38/243 (15%)
Query: 24 LLFDLDDTLYPLSTGFNLAC-----RRNIEEFMSQH---LHIDESEVPRMCLELYREHGT 75
+LFDLD TL + A + E + + I++ E + E E+G
Sbjct: 7 ILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGEYGL 66
Query: 76 TMAGLKAVGYEFDNDEFHAFVHGKLP-YEKLKPDPVLRNLLLSMPQRK---IIFTNADQK 131
T+ L + DE V L KL PD L +K I TN +
Sbjct: 67 TLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELGKKYKLGILTNGARP 126
Query: 132 HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 191
H L +LGL D F+ + E + + KP E E A
Sbjct: 127 HQERKLRQLGLLDYFDAVFISEDVG-----------------------VAKPDPEIFEYA 163
Query: 192 IRIANVDPKKTIFFDDSARN-IASAKAAGLHTV--IVGSSVPVPPADHALNSIHNIKEAI 248
+ V P++ +F DS N I A+A G+ TV G + I ++ E +
Sbjct: 164 LEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELL 223
Query: 249 PEI 251
+
Sbjct: 224 DLL 226
|
Length = 229 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 2e-16
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 36/211 (17%)
Query: 25 LFDLDDTLYPLSTGFNLACRRNIEEFMSQH-LHIDESEVPRMCLELYREHGTTMAG---- 79
FDLDDTL ++G RRN E + + L++D E L+L +E+G+
Sbjct: 6 FFDLDDTLID-TSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDY 64
Query: 80 -LKAVGYEFDNDEFHAFV--HGKLPYEKLKPDPVLRNLLLSMPQ---RKIIFTNADQKHA 133
++ + E++ AFV + KL + L+ P +R+ L+ + + R I T+
Sbjct: 65 LIRRLWEEYNPKLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQ 124
Query: 134 MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 193
E L RLG+ D F+ +I E G+E KP + A++
Sbjct: 125 WEKLERLGVRDFFDAVITSEEE-----------GVE------------KPHPKIFYAALK 161
Query: 194 IANVDPKKTIFFDDSA-RNIASAKAAGLHTV 223
V P++ + D ++I AK G+ TV
Sbjct: 162 RLGVKPEEAVMVGDRLDKDIKGAKNLGMKTV 192
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 7e-12
Identities = 56/246 (22%), Positives = 90/246 (36%), Gaps = 35/246 (14%)
Query: 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL 80
+ ++FD+D TL + + L R +E + I + E+ + + L
Sbjct: 2 IKAVIFDMDGTL--VDSEP-LHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKL 58
Query: 81 KAVGYEFDNDEFHA--FVHGKLPYEKLKPDPVLRNLLLSMPQRKIIF---TNADQKHAME 135
A D E + L E LKP P + LL + R I +++ ++ A
Sbjct: 59 AAGEDPADLAELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAER 118
Query: 136 VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA 195
VL RLGL D F+ I+ D KP+ + A
Sbjct: 119 VLARLGLLDYFDVIV------------TADDVARG-----------KPAPDIYLLAAERL 155
Query: 196 NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEA----IPEI 251
VDP++ + +DS I +AKAAG+ V V + P D + +P +
Sbjct: 156 GVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPAL 215
Query: 252 WEGEGE 257
E G
Sbjct: 216 LEARGI 221
|
Length = 221 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 8e-11
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 123 IIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC- 181
+ TN ++ +E+L LGL+D F+ +I + F
Sbjct: 44 ALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYY--------PKEGLFLGGGPFDIG 95
Query: 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225
KP+ + + A+++ VDP++ + DS +I AKAAG V V
Sbjct: 96 KPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 1e-08
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 26/131 (19%)
Query: 124 IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183
I TN ++ +L LGL D F+ I+ + + P KP
Sbjct: 110 IVTNKPERELDILLKALGLADYFDVIVGGDDVPPP-----------------------KP 146
Query: 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV--GSSVPVPPADH-ALNS 240
E + + +DP++ + DS +I +AKAAG+ V V G + A A
Sbjct: 147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVV 206
Query: 241 IHNIKEAIPEI 251
I ++ E + +
Sbjct: 207 IDSLAELLALL 217
|
Length = 220 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 1e-07
Identities = 35/213 (16%), Positives = 61/213 (28%), Gaps = 40/213 (18%)
Query: 21 YECLLFDLDDTLYPLST--GFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA 78
+ ++FDLD TL A + + + E +
Sbjct: 1 IKAVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRR---LL 57
Query: 79 GLKAVGYEFDNDEFHAFVHGKLPYEK---------LKPDPVLRNLLLSMPQRKI---IFT 126
G E + A + P R L + + I I T
Sbjct: 58 LRALAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILT 117
Query: 127 NADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLE 186
++ A + LGL F+ ++ + + KP +
Sbjct: 118 GDNRLTANAIARLLGL---FDALVSADLYGLV--------------------GVGKPDPK 154
Query: 187 AIETAIRIANVDPKKTIFFDDSARNIASAKAAG 219
E A+ V P++ + D +I +AKAAG
Sbjct: 155 IFELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-07
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV--------PVPP 233
KP+ + A+ VDP++ + DS +I +A+AAG+ T++V + V
Sbjct: 4 KPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVLTGVTTAEDLERAPGR 63
Query: 234 ADHALNSIHNI 244
D+ ++S+ ++
Sbjct: 64 PDYVVDSLADL 74
|
Length = 74 |
| >gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (104), Expect = 4e-05
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 25/112 (22%)
Query: 126 TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 185
TN +L LG+ D F +I +++ + KP
Sbjct: 116 TNKPTPFVAPLLEALGIADYFSVVIGGDSLPNK-----------------------KPDP 152
Query: 186 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV--GSSVPVPPAD 235
+ A +DP++ +F DS +I +A+AAG +V V G + P A
Sbjct: 153 APLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIAL 204
|
Length = 226 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 3e-04
Identities = 39/201 (19%), Positives = 65/201 (32%), Gaps = 45/201 (22%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMS-----QHLHIDESEVPRMCLELYREHGTTMA 78
+LFD+D TL + A + EEF + L + + E
Sbjct: 2 ILFDIDGTLVDIKFAIRRAFAQTFEEFGLNPAAFKRLKALRGLAEELLWRIATEA----- 56
Query: 79 GLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLG 138
L+ + D A++ G +L L + + I +N + +L
Sbjct: 57 -LEELQGHIGYDAEEAYIPG--------AADLLPRLKEA-GIKLGIISNGSLRAQKLLLR 106
Query: 139 RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD 198
+ GL D FE I+ +D KP E A+ V
Sbjct: 107 KHGLGDYFELILG----------SDEIGS--------------KPEPEIFLAALESLGVP 142
Query: 199 PKKTIFFDDSARNIASAKAAG 219
P + + D+ +I A+ AG
Sbjct: 143 P-EVLHVGDNLSDIKGARNAG 162
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
| >gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 4e-04
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADH 236
KPS + A + NV+P + +DS + + KAAG+ + V S+P AD
Sbjct: 150 KPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAV-PSIPKQTHLYSSADE 208
Query: 237 ALNSIHNIKEAIPEIW 252
+NS+ +++ PE W
Sbjct: 209 VINSLLDLQ---PEKW 221
|
Length = 382 |
| >gnl|CDD|181872 PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 6e-04
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVP 232
KP + ++ +FFDD+A NI +A A G+ +++V +P
Sbjct: 141 KPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDKQTIP 191
|
Length = 199 |
| >gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.004
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 182 KPSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIVGSSV---------PV 231
KPS E A+ +D + + D I AKAAGL T++V + V V
Sbjct: 190 KPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEV 249
Query: 232 PPADHALNSIHNIKEAIPEI 251
P + ++S+ + A+ E+
Sbjct: 250 KP-TYVVDSLAELITALKEL 268
|
Length = 269 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 274 | |||
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.97 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.96 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.96 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.95 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.95 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.95 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.95 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.95 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.95 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.94 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.94 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.94 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.94 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.94 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.94 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.94 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.94 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.93 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.93 | |
| PLN02940 | 382 | riboflavin kinase | 99.93 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.93 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.93 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.92 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.91 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.91 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.91 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.91 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.91 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.9 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.9 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.89 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.89 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.88 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.87 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.87 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.87 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.86 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.85 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.85 | |
| PLN02811 | 220 | hydrolase | 99.84 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.83 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.83 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.81 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.8 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.79 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.79 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.78 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.78 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.78 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.76 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.76 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.76 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.75 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.72 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.72 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.72 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.71 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.7 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.7 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.68 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.66 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.66 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.66 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.64 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.64 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.61 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.6 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.59 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.59 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.58 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.58 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.57 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.57 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.54 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.52 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.52 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.52 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.51 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.48 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.48 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.48 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.48 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.43 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.43 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.42 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.41 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.39 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.39 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.38 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.34 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.3 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.3 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.29 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.28 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.28 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.27 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.27 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 99.24 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.24 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.21 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.2 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.18 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.18 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.17 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.16 | |
| PLN02887 | 580 | hydrolase family protein | 99.15 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.14 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.14 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 99.12 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.1 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.09 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.07 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.05 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.05 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.04 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 98.95 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.92 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.88 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.87 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.86 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.84 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.84 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.83 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.77 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.71 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 98.67 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.65 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.65 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.64 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.64 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.62 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.61 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.53 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.52 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.51 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.46 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.36 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.35 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.33 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.27 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.25 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.22 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 98.2 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 98.19 | |
| PLN02423 | 245 | phosphomannomutase | 98.15 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.1 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.05 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.03 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 97.97 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.86 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 97.84 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.79 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 97.78 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 97.78 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 97.74 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 97.73 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.71 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.68 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 97.68 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 97.67 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.67 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.66 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.66 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.64 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.59 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.54 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.53 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 97.52 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.47 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.44 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.41 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 97.41 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 97.31 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.28 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 97.25 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 97.14 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 96.98 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.98 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 96.83 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.83 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 96.79 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.78 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 96.63 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.6 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 96.58 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 96.52 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 96.45 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 96.32 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 96.27 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 96.11 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.09 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 96.07 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.65 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 95.44 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 95.21 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 95.11 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 95.08 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 94.77 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 94.65 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 94.57 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 94.5 | |
| PLN03017 | 366 | trehalose-phosphatase | 94.16 | |
| PLN02151 | 354 | trehalose-phosphatase | 94.1 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 94.03 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 93.51 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 93.22 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 93.19 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 93.05 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 92.22 | |
| PLN02580 | 384 | trehalose-phosphatase | 92.02 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 91.36 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 91.24 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 91.12 | |
| PLN02151 | 354 | trehalose-phosphatase | 91.0 | |
| KOG1605 | 262 | consensus TFIIF-interacting CTD phosphatase, inclu | 90.98 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 90.9 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 90.08 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 89.71 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 89.15 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 88.75 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 87.36 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 86.74 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 86.72 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 85.03 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 85.01 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 84.5 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 82.92 | |
| PLN03017 | 366 | trehalose-phosphatase | 80.83 |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=206.17 Aligned_cols=220 Identities=60% Similarity=1.014 Sum_probs=206.4
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhcc
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGK 99 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (274)
++++++||+|.|||+....+...+++++.+++.+++|++.+.+..++..+++.||.....+...+..++.++++++.++.
T Consensus 14 ~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~~ 93 (244)
T KOG3109|consen 14 NYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHGR 93 (244)
T ss_pred cceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhcc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhHHHHHHhCCCc-EEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 100 LPYEKLKPDPVLRNLLLSMPQR-KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 100 ~~~~~~~~~~~~~~~L~~l~~~-~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
.++..++|.+.++++|-.|+.+ .+++||+...++...|+++|+.+||+.|++++...+. +-.
T Consensus 94 LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~-----------------~~~ 156 (244)
T KOG3109|consen 94 LPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI-----------------EKT 156 (244)
T ss_pred CcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC-----------------CCc
Confidence 9999999999999999999866 9999999999999999999999999999998854421 123
Q ss_pred cCCCCCHHHHHHHHHHhCCC-CCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHhhcc
Q 024023 179 ILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEG 256 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~-~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~~~~ 256 (274)
..+||.+++++.+.+..|+. |.+++||+||.++|+.|++.|++++++.......++++++.++.+..+.++.+|+.+.
T Consensus 157 ~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~~ 235 (244)
T KOG3109|consen 157 VVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKIKGVDYALEQIHNNKEALPELWEILE 235 (244)
T ss_pred eeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecccchHHHHHHhhchhhhchHHhhccc
Confidence 44699999999999999997 9999999999999999999999999999988889999999999999999999999865
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=204.07 Aligned_cols=199 Identities=17% Similarity=0.196 Sum_probs=149.1
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhc-
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHG- 98 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 98 (274)
++++|+||+||||+|+...+..++.+ .+++++....... .+...+|.........-.+...+.+.+.+..
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~-----~~~~~~~~~~~~~----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLH-----TLKTYYPNQYKRE----DVLPFIGPSLHDTFSKIDESKVEEMITTYREF 72 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHH-----HHHHhCCCCCCHH----HHHHHhCcCHHHHHHhcCHHHHHHHHHHHHHH
Confidence 57999999999999988877777775 4444443321111 2233345443322211111112222221111
Q ss_pred --cCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccccccc
Q 024023 99 --KLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 173 (274)
Q Consensus 99 --~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~ 173 (274)
........++||+.++|+.| +.+++|+||+....+...++.+|+..+|+.++++++....
T Consensus 73 ~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~--------------- 137 (214)
T PRK13288 73 NHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHA--------------- 137 (214)
T ss_pred HHHhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCC---------------
Confidence 11123567899999999988 4789999999999999999999999999999999988765
Q ss_pred CcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHhHHHHH
Q 024023 174 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEA 247 (274)
Q Consensus 174 ~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~~l~~~ 247 (274)
||+|+.+..+++++|++|+++++|||+.+|+.+|+++|+.++++.|+.. ...++++++++.++.++
T Consensus 138 --------Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~ 209 (214)
T PRK13288 138 --------KPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAI 209 (214)
T ss_pred --------CCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHH
Confidence 9999999999999999999999999999999999999999999988753 34689999999999987
Q ss_pred HHH
Q 024023 248 IPE 250 (274)
Q Consensus 248 l~~ 250 (274)
+..
T Consensus 210 i~~ 212 (214)
T PRK13288 210 VGD 212 (214)
T ss_pred Hhh
Confidence 654
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=193.94 Aligned_cols=184 Identities=58% Similarity=0.961 Sum_probs=150.1
Q ss_pred cEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhccCC
Q 024023 22 ECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLP 101 (274)
Q Consensus 22 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (274)
.+|+||+||||+|+...+..++.+++.+...+++|++......+...++..+|.....+... .....+.+...+.....
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLP 79 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCC
Confidence 37999999999999889999888877777778889877655555555555566554444332 34455667776665444
Q ss_pred CCCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 102 YEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 102 ~~~~~~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
...+.++||+.++|+.|+.+++|+||++...+...++.+|+..+|+.++++++.+.. ....
T Consensus 80 ~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~-------------------~~~~ 140 (184)
T TIGR01993 80 YEKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPD-------------------YLLP 140 (184)
T ss_pred HHhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCc-------------------cCCC
Confidence 456789999999999999999999999999999999999999999999999887641 0012
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
||+|+++..+++++|++|+++++|||+..|+.+|+++|++++++
T Consensus 141 KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 141 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred CCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 99999999999999999999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=199.81 Aligned_cols=199 Identities=22% Similarity=0.255 Sum_probs=152.5
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHH--hcCC------CChH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA--VGYE------FDND 90 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~ 90 (274)
++++.|+||+||||+|+...+..++.. .++.++.+...... +....|......-. .+.. ...+
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~ 72 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNA-----ALAELGLPPLDEEE----IRQLIGLGLDELIERLLGEADEEAAAELVE 72 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHhcCCHHHHHHHHhccccchhHHHHHH
Confidence 568999999999999999998888764 77888887533332 22223333222111 0100 0112
Q ss_pred HHHHHHhccCCCC-CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 91 EFHAFVHGKLPYE-KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 91 ~~~~~~~~~~~~~-~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
.+...+....... ...++||+.++|..| |++++|+|+.+...+...++.+|+..+|+.+++.++....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~-------- 144 (220)
T COG0546 73 RLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPP-------- 144 (220)
T ss_pred HHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCC--------
Confidence 2222222222111 257899999999888 4889999999999999999999999999999997766654
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccC
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNS 240 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~ 240 (274)
||+|..+..+++++|++|++++||||+.+|+.+|+++|+.++++.||+. ..++++++++
T Consensus 145 ---------------KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~ 209 (220)
T COG0546 145 ---------------KPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS 209 (220)
T ss_pred ---------------CcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC
Confidence 9999999999999999988999999999999999999999999999863 5679999999
Q ss_pred HhHHHHHHH
Q 024023 241 IHNIKEAIP 249 (274)
Q Consensus 241 l~~l~~~l~ 249 (274)
+.+|...+.
T Consensus 210 ~~el~~~l~ 218 (220)
T COG0546 210 LAELLALLA 218 (220)
T ss_pred HHHHHHHHh
Confidence 999998764
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-27 Score=202.37 Aligned_cols=194 Identities=24% Similarity=0.298 Sum_probs=144.2
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCC----CcchHHHHHHHHH-HHhcCcHHHHH-HhcC-CCC--
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHI----DESEVPRMCLELY-REHGTTMAGLK-AVGY-EFD-- 88 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~-~~~-- 88 (274)
+.++++|+|||||||+|+...+..++.+ .++++|. +... . .+. ...|....... .... ...
T Consensus 19 ~~~~k~viFDlDGTLiDs~~~~~~a~~~-----~~~~~g~~~g~~~~~-~----~~~~~~~G~~~~~~~~~~~~~~~~~~ 88 (248)
T PLN02770 19 LAPLEAVLFDVDGTLCDSDPLHYYAFRE-----MLQEINFNGGVPITE-E----FFVENIAGKHNEDIALGLFPDDLERG 88 (248)
T ss_pred cCccCEEEEcCCCccCcCHHHHHHHHHH-----HHHHhccccCCCCCH-H----HHHHHcCCCCHHHHHHHHcCcchhhH
Confidence 4568999999999999998888887776 3444432 2211 1 111 11233222211 1111 000
Q ss_pred ---hHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC
Q 024023 89 ---NDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 162 (274)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~ 162 (274)
...+...+... ......++||+.++|+.| +++++|+||+....+...++.+|+.++|+.+++++++...
T Consensus 89 ~~~~~~~~~~y~~~-~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~---- 163 (248)
T PLN02770 89 LKFTDDKEALFRKL-ASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHA---- 163 (248)
T ss_pred HHHHHHHHHHHHHH-HHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCC----
Confidence 01112222221 124578899999999888 5889999999999999999999999999999999988775
Q ss_pred CCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCcccc
Q 024023 163 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHA 237 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~ 237 (274)
||+|+.+..+++++|++|++|++|||+.+|+++|+++|+.++++.++.. ..+++++
T Consensus 164 -------------------KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~v 224 (248)
T PLN02770 164 -------------------KPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFL 224 (248)
T ss_pred -------------------CCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEE
Confidence 9999999999999999999999999999999999999999999987653 3579999
Q ss_pred ccCHhHHH
Q 024023 238 LNSIHNIK 245 (274)
Q Consensus 238 ~~~l~~l~ 245 (274)
++++.++.
T Consensus 225 i~~~~e~~ 232 (248)
T PLN02770 225 IKDYEDPK 232 (248)
T ss_pred eccchhhH
Confidence 99999944
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=199.66 Aligned_cols=196 Identities=20% Similarity=0.151 Sum_probs=147.1
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHH-HhcCCCCh-------HH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLK-AVGYEFDN-------DE 91 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------~~ 91 (274)
|+|+|+||+||||+|+...+..++.. .++++|.+...... .....|....... ........ +.
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNA-----MLAARGRAPITLAQ----LRPVVSKGARAMLAVAFPELDAAARDALIPE 81 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHH----HHHHhhhHHHHHHHHHhccCChHHHHHHHHH
Confidence 56899999999999988888777764 66677765332222 1222232222211 11111111 12
Q ss_pred HHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcc
Q 024023 92 FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
+.+.+.... .....++||+.++|+.| +.+++|+||++.......++.+|+..+|+.++++++.+..
T Consensus 82 ~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~---------- 150 (229)
T PRK13226 82 FLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAER---------- 150 (229)
T ss_pred HHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCC----------
Confidence 223332222 23468899999999888 4789999999999999999999999999999998877654
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-------CCCccccccCH
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-------VPPADHALNSI 241 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-------~~~a~~~~~~l 241 (274)
||+|+.+..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ..+++++++++
T Consensus 151 -------------KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~ 217 (229)
T PRK13226 151 -------------KPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQP 217 (229)
T ss_pred -------------CCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCH
Confidence 9999999999999999999999999999999999999999999987763 24699999999
Q ss_pred hHHHHHH
Q 024023 242 HNIKEAI 248 (274)
Q Consensus 242 ~~l~~~l 248 (274)
.+|.+.+
T Consensus 218 ~el~~~~ 224 (229)
T PRK13226 218 QLLWNPA 224 (229)
T ss_pred HHHHHHh
Confidence 9998765
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.8e-27 Score=201.04 Aligned_cols=204 Identities=14% Similarity=0.064 Sum_probs=147.7
Q ss_pred CCCccEEEEecCCCccCCchh-HHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH---------------HHH
Q 024023 18 AANYECLLFDLDDTLYPLSTG-FNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA---------------GLK 81 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------------~~~ 81 (274)
|+++|+|+||+||||+|+... +..++.+ .++.+|.+... . .....+|.... ...
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~-~----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 70 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVE-----AFAQFGVEITL-E----EARGPMGLGKWDHIRALLKMPRVAARWQA 70 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHH-----HHHHcCCCCCH-H----HHHHhcCCCHHHHHHHHHhcHHHHHHHHH
Confidence 457899999999999997543 2445543 44556665322 1 11222222211 011
Q ss_pred HhcCCCChHHHH-------HHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc-ceeE
Q 024023 82 AVGYEFDNDEFH-------AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF-EGII 150 (274)
Q Consensus 82 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f-d~i~ 150 (274)
..+.....+.+. +.+.... .....++||+.++|+.| +++++|+||+....+...++.+++.++| +.++
T Consensus 71 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~ 149 (267)
T PRK13478 71 VFGRLPTEADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVV 149 (267)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEE
Confidence 122222222221 1111111 24568899999999988 4889999999999999999999988875 8899
Q ss_pred ecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCC-CCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 151 CFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~-~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+++++... ||+|+.+..+++++|+. +++|++|||+.+|+.+|+++|+.++++.++.
T Consensus 150 ~~~~~~~~-----------------------KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~ 206 (267)
T PRK13478 150 TTDDVPAG-----------------------RPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSG 206 (267)
T ss_pred cCCcCCCC-----------------------CCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCc
Confidence 99887764 99999999999999996 6999999999999999999999999998875
Q ss_pred C-----------------------------CCCccccccCHhHHHHHHHHHHhhc
Q 024023 230 P-----------------------------VPPADHALNSIHNIKEAIPEIWEGE 255 (274)
Q Consensus 230 ~-----------------------------~~~a~~~~~~l~~l~~~l~~~~~~~ 255 (274)
. ..+++++++++.+|.+.+..+...+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~~ 261 (267)
T PRK13478 207 NELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIADLPAVIADIEARL 261 (267)
T ss_pred ccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHHH
Confidence 3 4579999999999999887665543
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=193.42 Aligned_cols=195 Identities=16% Similarity=0.203 Sum_probs=145.6
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHH-HhcCcHHHH-HH----hcCCC-ChHH--
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYR-EHGTTMAGL-KA----VGYEF-DNDE-- 91 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~-~~----~~~~~-~~~~-- 91 (274)
+|+|+||+||||+|+.+.+..++.+ +.++.|.+..... ... ..|...... .. .+... ..+.
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQ-----AVTAAGLSPTPEE-----VQSAWMGQSKIEAIRALLALDGADEAEAQAAF 70 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHH-----HHHHcCCCCCHHH-----HHHhhcCCCHHHHHHHHHhccCCCHHHHHHHH
Confidence 5799999999999999888888775 5556677543211 111 223332221 11 12211 0111
Q ss_pred --HHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCC--CccceeEecccCCCCCCCCCC
Q 024023 92 --FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADN 164 (274)
Q Consensus 92 --~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~--~~fd~i~~~~~~~~~~~~~~~ 164 (274)
+.+.+...+......++||+.++|+.| +++++|+||+....+...++.+|+. .+|+.++++++....
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~------ 144 (220)
T TIGR03351 71 ADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAG------ 144 (220)
T ss_pred HHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCC------
Confidence 122222212223468999999999998 4789999999999999999999998 999999999987764
Q ss_pred CCcccccccCcccccCCCCCHHHHHHHHHHhCCC-CCeEEEEcCChhcHHHHHHcCCeE-EEECCCCC------CCCccc
Q 024023 165 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP------VPPADH 236 (274)
Q Consensus 165 ~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~-~~~~i~VGDs~~Di~~a~~~G~~~-v~v~~~~~------~~~a~~ 236 (274)
||+|+++..+++++|+. |++|++|||+.+|+.+|+++|+.+ +++.++.. ...+++
T Consensus 145 -----------------KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~ 207 (220)
T TIGR03351 145 -----------------RPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTH 207 (220)
T ss_pred -----------------CCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCce
Confidence 99999999999999997 799999999999999999999999 88877653 456899
Q ss_pred cccCHhHHHHHH
Q 024023 237 ALNSIHNIKEAI 248 (274)
Q Consensus 237 ~~~~l~~l~~~l 248 (274)
+++++.+|..++
T Consensus 208 ~i~~~~~l~~~~ 219 (220)
T TIGR03351 208 VLDSVADLPALL 219 (220)
T ss_pred eecCHHHHHHhh
Confidence 999999987643
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.9e-27 Score=196.07 Aligned_cols=196 Identities=20% Similarity=0.238 Sum_probs=143.0
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHH-hcCcHH-----HHHHhcCCCChHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYRE-HGTTMA-----GLKAVGYEFDNDEF 92 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~ 92 (274)
+++++|+||+||||+|+...+..++.+ ..+.+|.+... .. .... .|.... .+...+.....+.+
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~-~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 71 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSL-EE----VFKRFKGVKLYEIIDIISKEHGVTLAKAEL 71 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCH-HH----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 468999999999999988777676654 55567765332 11 1122 222211 12233444444444
Q ss_pred HHHHhccC---CCCCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccc-eeEecccCCCCCCCCCCCCcc
Q 024023 93 HAFVHGKL---PYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFE-GIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 93 ~~~~~~~~---~~~~~~~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd-~i~~~~~~~~~~~~~~~~~~~ 168 (274)
...+.... ......++||+.++|+.|+.+++|+||++...+...++.+|+.++|+ .++++++++..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~---------- 141 (221)
T PRK10563 72 EPVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRW---------- 141 (221)
T ss_pred HHHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCC----------
Confidence 43322211 12457889999999999999999999999999999999999999996 67788777765
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHH
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNI 244 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l 244 (274)
||+|+.+..+++++|++|++|++|||+.+|+++|+++|++++++.++.. ...++.++.++.+|
T Consensus 142 -------------KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l 208 (221)
T PRK10563 142 -------------KPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQL 208 (221)
T ss_pred -------------CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998854332 22344556666666
Q ss_pred HHH
Q 024023 245 KEA 247 (274)
Q Consensus 245 ~~~ 247 (274)
.+.
T Consensus 209 ~~~ 211 (221)
T PRK10563 209 PEL 211 (221)
T ss_pred HHH
Confidence 653
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=197.75 Aligned_cols=123 Identities=14% Similarity=0.081 Sum_probs=110.7
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc-ceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f-d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
....++||+.++|+.| +++++|+||++...+..+++.+|+..+| +.+++++++...
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~-------------------- 155 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAG-------------------- 155 (253)
T ss_pred hcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCC--------------------
Confidence 4578999999999988 4889999999999999999999999986 899999988765
Q ss_pred cCCCCCHHHHHHHHHHhCCC-CCeEEEEcCChhcHHHHHHcCCeEEEECCCCC---------------------------
Q 024023 179 ILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------------------------- 230 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~-~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--------------------------- 230 (274)
||+|+.+..+++++|+. |++|++|||+.+|+.+|+++|+.++++.+|..
T Consensus 156 ---KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (253)
T TIGR01422 156 ---RPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATAR 232 (253)
T ss_pred ---CCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999999995 99999999999999999999999999988753
Q ss_pred --CCCccccccCHhHHHHHH
Q 024023 231 --VPPADHALNSIHNIKEAI 248 (274)
Q Consensus 231 --~~~a~~~~~~l~~l~~~l 248 (274)
..+++++++++.+|.++|
T Consensus 233 l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 233 LKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHhcCCCEehhcHHHHHHhh
Confidence 357999999999987654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=191.94 Aligned_cols=198 Identities=26% Similarity=0.359 Sum_probs=139.1
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcc--hHHHHHHHHHHHhcCc-----HHHHHHhcCCCChHHHH
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDES--EVPRMCLELYREHGTT-----MAGLKAVGYEFDNDEFH 93 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 93 (274)
+++|+||+||||+|+...+..++..... .....|.+.. ............++.. .............+...
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIE--VLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVA 79 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHH--HHHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHH
Confidence 6899999999999988877666543221 2334444422 1111111111222211 11111111111111111
Q ss_pred H---HHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCc
Q 024023 94 A---FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 167 (274)
Q Consensus 94 ~---~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~ 167 (274)
+ .+.. .....+.++||+.++|+.| |.+++|+||+....+...++.+|+..+|+.++++++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~--------- 149 (221)
T TIGR02253 80 AFVYAYHK-LKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVE--------- 149 (221)
T ss_pred HHHHHHHH-HHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCC---------
Confidence 1 1111 1124568999999999988 4789999999999999999999999999999999988875
Q ss_pred ccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC-------CCCcccccc
Q 024023 168 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-------VPPADHALN 239 (274)
Q Consensus 168 ~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~-------~~~a~~~~~ 239 (274)
||+|+.+..+++++|++++++++|||+. +|+.+|+++|+.++++.++.. ...+++++.
T Consensus 150 --------------KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~ 215 (221)
T TIGR02253 150 --------------KPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEIS 215 (221)
T ss_pred --------------CCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeC
Confidence 9999999999999999999999999998 899999999999999987653 235788888
Q ss_pred CHhHH
Q 024023 240 SIHNI 244 (274)
Q Consensus 240 ~l~~l 244 (274)
++.+|
T Consensus 216 ~~~el 220 (221)
T TIGR02253 216 SLREL 220 (221)
T ss_pred cHHhh
Confidence 88776
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-26 Score=190.85 Aligned_cols=191 Identities=25% Similarity=0.288 Sum_probs=143.2
Q ss_pred EEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcCCCChH---H----
Q 024023 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDND---E---- 91 (274)
Q Consensus 24 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---~---- 91 (274)
|+||+||||+|+...+..++.. ..++.|.+...... +....|..... +...+.....+ .
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNM-----ALAALGLPPATLAR----VIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL 71 (213)
T ss_pred CeecCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHH----HHHHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence 6899999999988877776664 55667765322221 22223333211 11112222221 1
Q ss_pred HHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcc
Q 024023 92 FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
+...+.... .....++||+.++|+.| |.+++|+|+++...+...++++|+..+|+.++++++.+..
T Consensus 72 ~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---------- 140 (213)
T TIGR01449 72 FDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQR---------- 140 (213)
T ss_pred HHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCC----------
Confidence 122222211 23468899999999988 4789999999999999999999999999999999887764
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHh
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIH 242 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~ 242 (274)
||+|+.+..+++++|++|+++++|||+.+|+.+|+++|+.++++.++.. ..+++++++++.
T Consensus 141 -------------Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~ 207 (213)
T TIGR01449 141 -------------KPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLN 207 (213)
T ss_pred -------------CCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHH
Confidence 9999999999999999999999999999999999999999999987653 357899999999
Q ss_pred HHHHH
Q 024023 243 NIKEA 247 (274)
Q Consensus 243 ~l~~~ 247 (274)
+|..+
T Consensus 208 ~l~~~ 212 (213)
T TIGR01449 208 ELPPL 212 (213)
T ss_pred HHHhh
Confidence 98764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-26 Score=192.43 Aligned_cols=195 Identities=21% Similarity=0.199 Sum_probs=146.3
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-----HHhcC-CCChHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-----KAVGY-EFDNDEF 92 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~ 92 (274)
.++|+|+||+||||+|+...+..++.+ +++..|.+...... +....|...... ...+. ....+.+
T Consensus 5 ~~~k~iiFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 75 (222)
T PRK10826 5 RQILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRREE----LPDTLGLRIDQVVDLWYARQPWNGPSRQEV 75 (222)
T ss_pred ccCcEEEEcCCCCCCcCHHHHHHHHHH-----HHHHCCCCCCHHHH----HHHhhCCCHHHHHHHHHHhcCCCCCCHHHH
Confidence 358999999999999988888777764 56677765432121 122223222111 11111 1112222
Q ss_pred H----HHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCC
Q 024023 93 H----AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 165 (274)
Q Consensus 93 ~----~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~ 165 (274)
. +.+.... .....++||+.++|+.| |.+++|+|++....+...++.+|+..+|+.++++++++..
T Consensus 76 ~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~------- 147 (222)
T PRK10826 76 VQRIIARVISLI-EETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYS------- 147 (222)
T ss_pred HHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCC-------
Confidence 1 1111111 24568999999999988 4889999999999999999999999999999999887764
Q ss_pred CcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCccccccC
Q 024023 166 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNS 240 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~~~ 240 (274)
||+|+.+..+++++|++|++|++|||+.+|+++|+++|++++++..+.. ...+++++.+
T Consensus 148 ----------------Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~ 211 (222)
T PRK10826 148 ----------------KPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES 211 (222)
T ss_pred ----------------CCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC
Confidence 9999999999999999999999999999999999999999999987653 2368899999
Q ss_pred HhHHHH
Q 024023 241 IHNIKE 246 (274)
Q Consensus 241 l~~l~~ 246 (274)
+.+|..
T Consensus 212 ~~dl~~ 217 (222)
T PRK10826 212 LTELTA 217 (222)
T ss_pred HHHHhh
Confidence 999864
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-26 Score=196.45 Aligned_cols=212 Identities=14% Similarity=0.205 Sum_probs=152.5
Q ss_pred ccccccccccCCCCCccEEEEecCCCccCCchhHH-HHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-HHh
Q 024023 6 PALKMDTMGRTTAANYECLLFDLDDTLYPLSTGFN-LACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAV 83 (274)
Q Consensus 6 ~~~~~~~~~~~~~~~~k~viFDlDGTL~d~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 83 (274)
|.++-+..+ ..+|+|+|||||||+||...+. .++.+ +++++|++..... ......|...... ..+
T Consensus 13 ~~~~~~~~~----~~~k~vIFDlDGTLvDS~~~~~~~a~~~-----~~~~~G~~~~~~e----~~~~~~G~~~~~~~~~l 79 (260)
T PLN03243 13 PLLRQHRLG----CGWLGVVLEWEGVIVEDDSELERKAWRA-----LAEEEGKRPPPAF----LLKRAEGMKNEQAISEV 79 (260)
T ss_pred HHHHHHHhc----CCceEEEEeCCCceeCCchHHHHHHHHH-----HHHHcCCCCCHHH----HHHHhcCCCHHHHHHHH
Confidence 444444444 3589999999999999865444 45553 6667777643211 1122334433221 111
Q ss_pred -cCCCChH---HH----HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEec
Q 024023 84 -GYEFDND---EF----HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF 152 (274)
Q Consensus 84 -~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~ 152 (274)
......+ .+ ...+. ........++||+.++|+.| |++++|+||++...+...++.+|+.++|+.++++
T Consensus 80 ~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~ 158 (260)
T PLN03243 80 LCWSRDFLQMKRLAIRKEDLYE-YMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAA 158 (260)
T ss_pred hccCCCHHHHHHHHHHHHHHHH-HHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEec
Confidence 1111111 11 11111 11123467899999999988 4899999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--
Q 024023 153 ETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-- 230 (274)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-- 230 (274)
+++... ||+|+.+..+++++|++|++|++|||+.+|+.+|+++|+.++++.....
T Consensus 159 ~d~~~~-----------------------KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~ 215 (260)
T PLN03243 159 EDVYRG-----------------------KPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVY 215 (260)
T ss_pred ccCCCC-----------------------CCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchh
Confidence 988765 9999999999999999999999999999999999999999999863221
Q ss_pred -CCCccccccCHhHHHHHHHHHHhh
Q 024023 231 -VPPADHALNSIHNIKEAIPEIWEG 254 (274)
Q Consensus 231 -~~~a~~~~~~l~~l~~~l~~~~~~ 254 (274)
...++++++++.+|...+..-++.
T Consensus 216 ~l~~ad~vi~~~~el~~~~~~~~~~ 240 (260)
T PLN03243 216 ELSAGDLVVRRLDDLSVVDLKNLSD 240 (260)
T ss_pred hhccCCEEeCCHHHHHHHHHhhhhc
Confidence 345899999999998765555554
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-26 Score=190.60 Aligned_cols=192 Identities=21% Similarity=0.218 Sum_probs=141.1
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-HHHhcCCCChHHHHHHHh
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-LKAVGYEFDNDEFHAFVH 97 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 97 (274)
|++|+|+||+||||+|+...+..++.+ .++++|++..... ....|..... +..+......+.+.+.+.
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 69 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWSN-----WADRHGIAPDEVL------NFIHGKQAITSLRHFMAGASEAEIQAEFT 69 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHHH-----HHHHcCCCHHHHH------HHHcCCCHHHHHHHHhccCCcHHHHHHHH
Confidence 357999999999999988888777775 6667777532111 1112332221 222211122222222111
Q ss_pred -----ccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccc
Q 024023 98 -----GKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 169 (274)
Q Consensus 98 -----~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~ 169 (274)
.........++||+.++|+.| +.+++|+||++.......++..++ .+|+.+++++++...
T Consensus 70 ~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~----------- 137 (218)
T PRK11587 70 RLEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRG----------- 137 (218)
T ss_pred HHHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCC-----------
Confidence 111124678999999999888 488999999998888888888888 457888888877664
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC---CCCccccccCHhHHH
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIK 245 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~---~~~a~~~~~~l~~l~ 245 (274)
||+|+.+..+++++|+.|++|++|||+.+|+++|+++|+.++++.++.. ...++++++++.+|.
T Consensus 138 ------------KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 138 ------------KPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred ------------CCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhee
Confidence 9999999999999999999999999999999999999999999987653 346889999998875
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.4e-26 Score=200.65 Aligned_cols=202 Identities=15% Similarity=0.207 Sum_probs=148.2
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-HHh-cCCCCh---HHH--
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAV-GYEFDN---DEF-- 92 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~---~~~-- 92 (274)
..++|||||||||+|+...+....+. .+.++.|.+..... ......|...... ..+ ...... +.+
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~----~l~~e~G~~~~~~e----~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~ 201 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWL----TLAQEEGKSPPPAF----ILRRVEGMKNEQAISEVLCWSRDPAELRRMAT 201 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHH----HHHHHcCCCCCHHH----HHHHhcCCCHHHHHHHHhhccCCHHHHHHHHH
Confidence 57899999999999988755543332 25566777643211 1223344443322 111 111111 111
Q ss_pred --HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCc
Q 024023 93 --HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 167 (274)
Q Consensus 93 --~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~ 167 (274)
.+.+.... .....++||+.++|+.| |++++|+|++....+...++.+|+..+|+.+++++++...
T Consensus 202 ~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~--------- 271 (381)
T PLN02575 202 RKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRG--------- 271 (381)
T ss_pred HHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCC---------
Confidence 22222211 23467899999999998 5889999999999999999999999999999999988764
Q ss_pred ccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC---CCCccccccCHhHH
Q 024023 168 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNI 244 (274)
Q Consensus 168 ~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~---~~~a~~~~~~l~~l 244 (274)
||+|+++..+++++|++|++|++|||+.+|+++|+++|+.+|++.++.. ...++++++++.+|
T Consensus 272 --------------KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL 337 (381)
T PLN02575 272 --------------KPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRRLDEL 337 (381)
T ss_pred --------------CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHHH
Confidence 9999999999999999999999999999999999999999999987553 33588999999999
Q ss_pred HH-HHHHHHh
Q 024023 245 KE-AIPEIWE 253 (274)
Q Consensus 245 ~~-~l~~~~~ 253 (274)
.. .++.+..
T Consensus 338 ~~~~l~~l~~ 347 (381)
T PLN02575 338 SIVDLKNLAD 347 (381)
T ss_pred HHHHHhhhhh
Confidence 53 3444443
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=185.98 Aligned_cols=192 Identities=21% Similarity=0.264 Sum_probs=144.4
Q ss_pred EEEecCCCccCCchhHHHHHHHHHHHHHHhh-cCCCcchHHHHHHHHHHHhcCcHHH-HHHhcCCCC-hHHHHHHHhccC
Q 024023 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQH-LHIDESEVPRMCLELYREHGTTMAG-LKAVGYEFD-NDEFHAFVHGKL 100 (274)
Q Consensus 24 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~ 100 (274)
|+|||||||+|+.+.+..++.++ .++ .|.+..... .+....|..... +...+.+.. .+.+......
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-- 69 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIA-----YREVVGDGPAPFE----EYRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR-- 69 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHH-----HHHhcCCCCCCHH----HHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH--
Confidence 68999999999988888888753 333 344322211 222233333322 222332211 1112111221
Q ss_pred CCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccc
Q 024023 101 PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 177 (274)
Q Consensus 101 ~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (274)
....+.++||+.++|+.| +.+++|+||++...+...++.+|+..+|+.++++++....
T Consensus 70 ~~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~------------------- 130 (205)
T TIGR01454 70 LAGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRP------------------- 130 (205)
T ss_pred hhcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCC-------------------
Confidence 124678999999999988 4789999999999999999999999999999999887654
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHhHHHHHHH
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~~l~~~l~ 249 (274)
||+++.+..+++++|++++++++|||+.+|+.+|+++|+.++++.||.. ..+++++++++.+|..+++
T Consensus 131 ----KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 131 ----KPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALCR 204 (205)
T ss_pred ----CCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999988864 4568999999999987654
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-25 Score=186.19 Aligned_cols=202 Identities=18% Similarity=0.230 Sum_probs=140.5
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCc-----HHH-HHHhcCCCChHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTT-----MAG-LKAVGYEFDNDEF 92 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~ 92 (274)
.++|+|+|||||||+|+... ...+.+...+.+.+..|.+...........+...+.. ... ....+. ....+
T Consensus 8 ~~~k~vIFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 84 (224)
T PRK14988 8 QDVDTVLLDMDGTLLDLAFD-NYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSERLGL--DICAM 84 (224)
T ss_pred ccCCEEEEcCCCCccchhhh-chHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHHHhCC--CHHHH
Confidence 35789999999999995311 1122222333455677876543222211111111110 000 111111 11111
Q ss_pred HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccc
Q 024023 93 HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 169 (274)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~ 169 (274)
... ......++||+.++|+.| |.+++|+||+....+...++.+|+..+|+.++++++++..
T Consensus 85 ~~~-----~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~----------- 148 (224)
T PRK14988 85 TTE-----QGPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYP----------- 148 (224)
T ss_pred HHH-----HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCC-----------
Confidence 111 124578899999999988 4789999999999999999999999999999999988865
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeE-EEECCCCC--CCCccccccCHhHHHH
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP--VPPADHALNSIHNIKE 246 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~-v~v~~~~~--~~~a~~~~~~l~~l~~ 246 (274)
||+|+.+..+++++|++|++|++|||+.+|+++|+++|+++ +++.++.. ...+.....++.++.+
T Consensus 149 ------------KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 216 (224)
T PRK14988 149 ------------KEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRR 216 (224)
T ss_pred ------------CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccchhccCCCcHHHHHH
Confidence 99999999999999999999999999999999999999985 56766554 3455566788888887
Q ss_pred HHHHH
Q 024023 247 AIPEI 251 (274)
Q Consensus 247 ~l~~~ 251 (274)
.+..+
T Consensus 217 ~~~~l 221 (224)
T PRK14988 217 LIPSL 221 (224)
T ss_pred Hhhhh
Confidence 77665
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=194.19 Aligned_cols=202 Identities=20% Similarity=0.258 Sum_probs=150.2
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-HH-hc-----CCCCh-
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KA-VG-----YEFDN- 89 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~-----~~~~~- 89 (274)
..++|+|+||+||||+|+...+..++.. +.+..|.+...... +....|.....+ .. +. ...+.
T Consensus 10 ~~~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 80 (272)
T PRK13223 10 GRLPRLVMFDLDGTLVDSVPDLAAAVDR-----MLLELGRPPAGLEA----VRHWVGNGAPVLVRRALAGSIDHDGVDDE 80 (272)
T ss_pred CccCCEEEEcCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHhChhHHHHHHHHhcccccccCCCHH
Confidence 3568999999999999988887777764 66777776433222 122223222211 11 00 01111
Q ss_pred --HHHHHHHhccC--CCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC
Q 024023 90 --DEFHAFVHGKL--PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 162 (274)
Q Consensus 90 --~~~~~~~~~~~--~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~ 162 (274)
+.+.+.+.+.+ ......++||+.++|+.| +.+++|+||++...+...++.+|+..+|+.++++++.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~---- 156 (272)
T PRK13223 81 LAEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQK---- 156 (272)
T ss_pred HHHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCC----
Confidence 12222222111 123457899999999988 4789999999999999999999999999999999877654
Q ss_pred CCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccc
Q 024023 163 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADH 236 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~ 236 (274)
||+|+.+..+++++|+++++|++|||+.+|+++|+++|+.++++.+|.. ...+++
T Consensus 157 -------------------Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~ 217 (272)
T PRK13223 157 -------------------KPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPAL 217 (272)
T ss_pred -------------------CCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCE
Confidence 9999999999999999999999999999999999999999999988753 347999
Q ss_pred cccCHhHHHHHHHHH
Q 024023 237 ALNSIHNIKEAIPEI 251 (274)
Q Consensus 237 ~~~~l~~l~~~l~~~ 251 (274)
+++++.+|.+++...
T Consensus 218 vi~~l~el~~~~~~~ 232 (272)
T PRK13223 218 VIDDLRALLPGCADP 232 (272)
T ss_pred EECCHHHHHHHHhcc
Confidence 999999998776644
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-25 Score=186.74 Aligned_cols=200 Identities=20% Similarity=0.243 Sum_probs=148.7
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-----HHhcCCCChHHH
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-----KAVGYEFDNDEF 92 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 92 (274)
.+++++|+||+||||+|+...+..++.. +.+.+|.+......+ ....+.....+ ...+...+.+.+
T Consensus 3 ~~~~~~iiFD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 73 (226)
T PRK13222 3 FMDIRAVAFDLDGTLVDSAPDLAAAVNA-----ALAALGLPPAGEERV----RTWVGNGADVLVERALTWAGREPDEELL 73 (226)
T ss_pred CCcCcEEEEcCCcccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhCccHHHHHHHHHhhccCCccHHHH
Confidence 3568999999999999987777766654 555667654332221 11222222111 111112222222
Q ss_pred -------HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC
Q 024023 93 -------HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 162 (274)
Q Consensus 93 -------~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~ 162 (274)
...+.... .....++||+.++|+.+ +.+++++|++.......+++.+|+..+|+.+++.++.+..
T Consensus 74 ~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---- 148 (226)
T PRK13222 74 EKLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNK---- 148 (226)
T ss_pred HHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCC----
Confidence 22222211 13467899999999988 4789999999999999999999999999999998877654
Q ss_pred CCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccc
Q 024023 163 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADH 236 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~ 236 (274)
||+|+++..++++++++++++++|||+.+|+++|+++|++++++.++.. ...+++
T Consensus 149 -------------------kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~ 209 (226)
T PRK13222 149 -------------------KPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDV 209 (226)
T ss_pred -------------------CcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCE
Confidence 9999999999999999999999999999999999999999999988764 346889
Q ss_pred cccCHhHHHHHHHH
Q 024023 237 ALNSIHNIKEAIPE 250 (274)
Q Consensus 237 ~~~~l~~l~~~l~~ 250 (274)
++.++.+|..++..
T Consensus 210 ~i~~~~~l~~~l~~ 223 (226)
T PRK13222 210 VIDHFAELLPLLGL 223 (226)
T ss_pred EECCHHHHHHHHHH
Confidence 99999999987654
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-25 Score=188.81 Aligned_cols=197 Identities=15% Similarity=0.216 Sum_probs=147.0
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-HHHhcCC-CChHH----HH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-LKAVGYE-FDNDE----FH 93 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~----~~ 93 (274)
.+++++||+||||+||.+.+...+.+ ..+++|.+...... +....+..... +...+.. ...+. +.
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~~~~~~~----~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 131 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANA-----HAPDFGYDPIDERD----YAQLRQWSSRTIVRRAGLSPWQQARLLQRVQ 131 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHHH
Confidence 58999999999999998888777764 56777775332111 11122222221 1222221 01111 22
Q ss_pred HHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccc
Q 024023 94 AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 170 (274)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~ 170 (274)
+.+.. ....++++||+.++|+.| +++++|+|++....+...++.+|+..+|+.+++.++.
T Consensus 132 ~~~~~--~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~--------------- 194 (273)
T PRK13225 132 RQLGD--CLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI--------------- 194 (273)
T ss_pred HHHHh--hcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC---------------
Confidence 22211 134678899999999998 4789999999999999999999999999988877643
Q ss_pred cccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHhHH
Q 024023 171 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNI 244 (274)
Q Consensus 171 ~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~~l 244 (274)
+++++.+..++++++++|++|++|||+.+|+.+|+++|+.++++.++.. ..+++++++++.+|
T Consensus 195 -----------~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL 263 (273)
T PRK13225 195 -----------LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDL 263 (273)
T ss_pred -----------CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHH
Confidence 4457899999999999999999999999999999999999999988764 35799999999999
Q ss_pred HHHHHHHHh
Q 024023 245 KEAIPEIWE 253 (274)
Q Consensus 245 ~~~l~~~~~ 253 (274)
.+++.++.+
T Consensus 264 ~~~~~~~~~ 272 (273)
T PRK13225 264 LQAVTQLMR 272 (273)
T ss_pred HHHHHHHhc
Confidence 998776653
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.6e-25 Score=184.01 Aligned_cols=199 Identities=25% Similarity=0.269 Sum_probs=143.8
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHH--HH---HHHHHHHh--cC-cHH---------HHHHh
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVP--RM---CLELYREH--GT-TMA---------GLKAV 83 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~---~~~~~~~~--~~-~~~---------~~~~~ 83 (274)
+|+|+||+||||+|+...+...+.+ +.+..|.+..... .+ ....+..+ +. ... .+...
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRL-----LFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY 75 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHH-----HHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 5799999999999988877766664 4455665532111 11 01111111 11 000 11122
Q ss_pred cCCCChHHHHHHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCC
Q 024023 84 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 161 (274)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~ 161 (274)
+.....+.+...+.... .....++||+.++|+.++ .+++|+||+....+...++.+|+..+||.++++++.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~--- 151 (224)
T TIGR02254 76 NTEADEALLNQKYLRFL-EEGHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQ--- 151 (224)
T ss_pred CCCCcHHHHHHHHHHHH-hccCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCC---
Confidence 22222222322222211 234678999999999885 789999999999999999999999999999999988875
Q ss_pred CCCCCcccccccCcccccCCCCCHHHHHHHHHHh-CCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC----CCCcc
Q 024023 162 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA-NVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPAD 235 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~-g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~----~~~a~ 235 (274)
||+|+++..+++++ |++|+++++|||+. +|+.+|+++|++++++.++.. ...++
T Consensus 152 --------------------KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~ 211 (224)
T TIGR02254 152 --------------------KPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPT 211 (224)
T ss_pred --------------------CCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCc
Confidence 99999999999999 99999999999998 799999999999999987542 34678
Q ss_pred ccccCHhHHHHHH
Q 024023 236 HALNSIHNIKEAI 248 (274)
Q Consensus 236 ~~~~~l~~l~~~l 248 (274)
++++++.+|.++|
T Consensus 212 ~~~~~~~el~~~~ 224 (224)
T TIGR02254 212 YEIRSLEELYEIL 224 (224)
T ss_pred eEECCHHHHHhhC
Confidence 9999999988753
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-25 Score=184.69 Aligned_cols=123 Identities=19% Similarity=0.236 Sum_probs=109.0
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 104 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
...++||+.++|+.|+ .+++|+||+........++.+|+..+||.++++++.+..
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~----------------------- 149 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVA----------------------- 149 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCC-----------------------
Confidence 4678999999999994 789999999999999999999999999999999988875
Q ss_pred CCCHHHHHHHHHHhCCC-CCeEEEEcCCh-hcHHHHHHcCCeEEEECCCC-C---CCCccccccCHhHHHHHHH
Q 024023 182 KPSLEAIETAIRIANVD-PKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV-P---VPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~-~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~-~---~~~a~~~~~~l~~l~~~l~ 249 (274)
||+|+++..+++++|+. +++|++|||+. +|+.+|+++|+.++++.++. . ...+++++.++.+|.+++.
T Consensus 150 KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 150 KPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred CCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence 99999999999999985 47999999998 79999999999999997432 2 2458899999999988764
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-25 Score=200.41 Aligned_cols=195 Identities=20% Similarity=0.256 Sum_probs=148.3
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH-----HHHHhcCCCChHHHHH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFHA 94 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 94 (274)
.+|+|+||+||||+|+...+..++.. +++++|.+.... ......|.... .+...+.....+.+.+
T Consensus 10 ~ik~VIFDlDGTLvDt~~~~~~a~~~-----~~~~~G~~~~~~-----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGIVSDVLKA-----FLVKYGKQWDGR-----EAQKIVGKTPLEAAATVVEDYGLPCSTDEFNS 79 (382)
T ss_pred cCCEEEECCcCcCCcCHHHHHHHHHH-----HHHHcCCCCCHH-----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence 58999999999999988888877775 556667654321 12233333222 1222333333333322
Q ss_pred HHhccC--CCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHH-HcCCCCccceeEecccCCCCCCCCCCCCcc
Q 024023 95 FVHGKL--PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLG-RLGLEDCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 95 ~~~~~~--~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~-~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
.+.... .+....++||+.++|+.| +.+++|+||++...+...++ .+|+.++|+.+++++++...
T Consensus 80 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~---------- 149 (382)
T PLN02940 80 EITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKG---------- 149 (382)
T ss_pred HHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCC----------
Confidence 222111 124567899999999988 48899999999999888887 78999999999999988765
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHH
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNI 244 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l 244 (274)
||+|+.+..+++++|++|++|++|||+.+|+++|+++|+.++++.++.. ...++++++++.++
T Consensus 150 -------------KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 150 -------------KPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred -------------CCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence 9999999999999999999999999999999999999999999988653 45789999999998
Q ss_pred HHH
Q 024023 245 KEA 247 (274)
Q Consensus 245 ~~~ 247 (274)
...
T Consensus 217 ~~~ 219 (382)
T PLN02940 217 QPE 219 (382)
T ss_pred CHH
Confidence 643
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.8e-25 Score=180.04 Aligned_cols=174 Identities=19% Similarity=0.335 Sum_probs=128.1
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcCCCChHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDNDEFH 93 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 93 (274)
.++++|+||+||||+|+...+..++.+ +.+++|.+... . ......|..... ....+.....+.+.
T Consensus 3 ~~~~~viFD~DGTLiDs~~~~~~a~~~-----~~~~~g~~~~~-~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (188)
T PRK10725 3 DRYAGLIFDMDGTILDTEPTHRKAWRE-----VLGRYGLQFDE-Q----AMVALNGSPTWRIAQAIIELNQADLDPHALA 72 (188)
T ss_pred CcceEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCH-H----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence 367999999999999998888887775 45556665321 1 112222322211 11122233333332
Q ss_pred HHHh---ccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcc
Q 024023 94 AFVH---GKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 94 ~~~~---~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
..+. .........++|+ .++|..++ .+++|+||++...+...++++|+..+|+.++++++.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~---------- 141 (188)
T PRK10725 73 REKTEAVKSMLLDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHH---------- 141 (188)
T ss_pred HHHHHHHHHHHhccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCC----------
Confidence 2111 1111244567786 47888774 789999999999999999999999999999999988765
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
||+|+.+..+++++|++|+++++|||+.+|+++|+++|++++++.
T Consensus 142 -------------KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 142 -------------KPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred -------------CCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999999999999999999999999874
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=182.66 Aligned_cols=195 Identities=27% Similarity=0.326 Sum_probs=144.4
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCc----HHHHHH-hcCC--CChHHH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTT----MAGLKA-VGYE--FDNDEF 92 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~--~~~~~~ 92 (274)
+++++||||||||+||+..+..++.+ +++++|+..... .....+|.. ...+.. .... ......
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~-----~~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLE-----ALKEYGIEISDE-----EIRELHGGGIARIIDLLRKLAAGEDPADLAEL 70 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHH-----HHHHcCCCCCHH-----HHHHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence 36899999999999998888888875 778888876541 122223321 111111 1111 122222
Q ss_pred HHHHh--ccCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCc
Q 024023 93 HAFVH--GKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 167 (274)
Q Consensus 93 ~~~~~--~~~~~~~~~~~~~~~~~L~~l~---~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~ 167 (274)
..... .........+.||+.++|+.|+ .++++.|+++...+...++.+|+.++|+.+++++++...
T Consensus 71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~--------- 141 (221)
T COG0637 71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARG--------- 141 (221)
T ss_pred HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcC---------
Confidence 22211 1122356789999999999996 888999999999999999999999999999999988874
Q ss_pred ccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--------CCCcccccc
Q 024023 168 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------VPPADHALN 239 (274)
Q Consensus 168 ~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~ 239 (274)
||.|+.|..+++++|+.|++|+.|+|+.+.+++|+++|+.++++..+.. ...++....
T Consensus 142 --------------KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~ 207 (221)
T COG0637 142 --------------KPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLL 207 (221)
T ss_pred --------------CCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecCCCCccccchhhhhhcchhhc
Confidence 9999999999999999999999999999999999999999999986443 233455555
Q ss_pred CHhHHHHH
Q 024023 240 SIHNIKEA 247 (274)
Q Consensus 240 ~l~~l~~~ 247 (274)
++.++...
T Consensus 208 ~~~~l~~~ 215 (221)
T COG0637 208 DLAELPAL 215 (221)
T ss_pred cHHHHHHH
Confidence 55555443
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=177.18 Aligned_cols=124 Identities=26% Similarity=0.384 Sum_probs=113.1
Q ss_pred CCCCChhHHHHHHhCCCc--EEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 104 KLKPDPVLRNLLLSMPQR--KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~~~--~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
.++++|++.++|+.++.+ ++++||+........++.+|+.++||.++++++.+..
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~----------------------- 153 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVA----------------------- 153 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccC-----------------------
Confidence 478999999999999755 9999999999999999999999999999999999976
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC-----CCCccccccCHhHHHHHHHH
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKEAIPE 250 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~~~l~~l~~~l~~ 250 (274)
||.|.+|..+++++|++|+++++|||+. ||+.+|+++|+++||++.+.. ...+++.+.++.++.+.+..
T Consensus 154 KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 154 KPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred CCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHhh
Confidence 9999999999999999999999999999 788999999999999987653 24788999999999987653
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-23 Score=176.96 Aligned_cols=118 Identities=15% Similarity=0.194 Sum_probs=102.3
Q ss_pred CCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 103 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
..+.++||+.++|+.|+ .+++|+||++.. ++..|+.++|+.++++++.+..
T Consensus 110 ~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~---------------------- 162 (238)
T PRK10748 110 SRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRS---------------------- 162 (238)
T ss_pred hcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCcC----------------------
Confidence 34688999999999994 779999998765 3678999999999999988765
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI 248 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l~~~l 248 (274)
||+|+++..+++++|+.|++|++|||+. +|+.+|+++|+.++++..+.. ...+++.+.++.+|.++|
T Consensus 163 -KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 163 -KPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred -CCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence 9999999999999999999999999995 999999999999999976432 135888999999988753
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.4e-23 Score=169.08 Aligned_cols=104 Identities=21% Similarity=0.375 Sum_probs=96.5
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
....++||+.++|+.| |++++|+||++...+...++.+|+..+|+.++++++++..
T Consensus 89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~--------------------- 147 (198)
T TIGR01428 89 LRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAY--------------------- 147 (198)
T ss_pred hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCC---------------------
Confidence 3467899999999988 4789999999999999999999999999999999998875
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||+|+++..+++++|++|+++++|||+.+|+.+|+++|+.+++++.+.
T Consensus 148 --KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 148 --KPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred --CCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 999999999999999999999999999999999999999999997654
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-23 Score=193.08 Aligned_cols=202 Identities=14% Similarity=0.219 Sum_probs=144.0
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhh-cCCCcchHHHHHHHHHHHhcCcHHHH-HHhcCCCC---hHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQH-LHIDESEVPRMCLELYREHGTTMAGL-KAVGYEFD---NDEFH 93 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~ 93 (274)
+|+++|+|||||||+|+...+..++.+.+.++.... .+.... . ..+....|...... ..+..... .+.+.
T Consensus 239 ~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~-~----~~~~~~~G~~~~~~~~~l~~~~~~~~~~~~~ 313 (459)
T PRK06698 239 EMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTP-I----DKYREIMGVPLPKVWEALLPDHSLEIREQTD 313 (459)
T ss_pred HhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCC-H----HHHHHHcCCChHHHHHHHhhhcchhHHHHHH
Confidence 457999999999999999988888887665532111 111111 0 12223334332221 11111111 11222
Q ss_pred HH----HhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 94 AF----VHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 94 ~~----~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
.. +.+.......+++||+.++|++| +.+++|+||+....+...++.+|+..+|+.+++++++..
T Consensus 314 ~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~--------- 384 (459)
T PRK06698 314 AYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINS--------- 384 (459)
T ss_pred HHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCC---------
Confidence 22 22211123568899999999888 488999999999999999999999999999999987642
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHh
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIH 242 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~ 242 (274)
||||+.+..++++++ |++|++|||+.+|+.+|+++|+.++++.++.. ...++++++++.
T Consensus 385 ---------------~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~ 447 (459)
T PRK06698 385 ---------------LNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLL 447 (459)
T ss_pred ---------------CCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHH
Confidence 778889999998865 68999999999999999999999999987653 346899999999
Q ss_pred HHHHHHHHH
Q 024023 243 NIKEAIPEI 251 (274)
Q Consensus 243 ~l~~~l~~~ 251 (274)
+|.+++...
T Consensus 448 el~~~l~~~ 456 (459)
T PRK06698 448 ELKGILSTV 456 (459)
T ss_pred HHHHHHHHH
Confidence 999876544
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.8e-23 Score=180.01 Aligned_cols=198 Identities=19% Similarity=0.282 Sum_probs=134.2
Q ss_pred CccEEEEecCCCccCCc-hhHHHHHHHHHHHHHHhhcCCCc-chHHHHHHHHHHHhcCcHHH----HHHhcCC-------
Q 024023 20 NYECLLFDLDDTLYPLS-TGFNLACRRNIEEFMSQHLHIDE-SEVPRMCLELYREHGTTMAG----LKAVGYE------- 86 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~-~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~------- 86 (274)
++++|||||||||+|+. ..+..++.+ +++.+|++. .........+.. .|..... +...+..
T Consensus 39 ~~k~VIFDlDGTLvDS~~~~~~~a~~~-----~l~~~G~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 112 (286)
T PLN02779 39 LPEALLFDCDGVLVETERDGHRVAFND-----AFKEFGLRPVEWDVELYDELLN-IGGGKERMTWYFNENGWPTSTIEKA 112 (286)
T ss_pred CCcEEEEeCceeEEccccHHHHHHHHH-----HHHHcCCCCCCCCHHHHHHHHc-cCCChHHHHHHHHHcCCCccccccC
Confidence 57999999999999988 777777765 556677732 111111011111 2221111 1111111
Q ss_pred -CChH-------HHH----HHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccce--e
Q 024023 87 -FDND-------EFH----AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG--I 149 (274)
Q Consensus 87 -~~~~-------~~~----~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~--i 149 (274)
...+ .+. ..+........+.++||+.++|+.| |++++|+||++...+..+++.++...+|+. +
T Consensus 113 ~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~ 192 (286)
T PLN02779 113 PKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDV 192 (286)
T ss_pred CccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEE
Confidence 0111 111 1121111112358999999999887 589999999999999988887643334432 3
Q ss_pred EecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 150 ICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+++++++.. ||+|+++..+++++|++|++|++|||+.+|+++|+++|+.++++.++.
T Consensus 193 v~~~~~~~~-----------------------KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~ 249 (286)
T PLN02779 193 FAGDDVPKK-----------------------KPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSY 249 (286)
T ss_pred EeccccCCC-----------------------CCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCC
Confidence 366666554 999999999999999999999999999999999999999999998765
Q ss_pred C----CCCccccccCHhHHHH
Q 024023 230 P----VPPADHALNSIHNIKE 246 (274)
Q Consensus 230 ~----~~~a~~~~~~l~~l~~ 246 (274)
. ...++++++++.++..
T Consensus 250 ~~~~~l~~ad~vi~~~~~l~~ 270 (286)
T PLN02779 250 TADEDFSGADAVFDCLGDVPL 270 (286)
T ss_pred ccccccCCCcEEECChhhcch
Confidence 3 2468999999999874
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-23 Score=170.22 Aligned_cols=170 Identities=22% Similarity=0.341 Sum_probs=122.6
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcCCCChHHHH--
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDNDEFH-- 93 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-- 93 (274)
+|+|+||+||||+|+...+..++.+ +.+++|.+... .. .....|..... +...+...+.+.+.
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~--~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKH-----LADKYGIEFDK--QY---NTSLGGLSREDILRAILKLRKPGLSLETIHQL 70 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHH-----HHHHcCCCCCH--HH---HHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 4789999999999988776666664 45566665321 11 11112222111 11111123333222
Q ss_pred -----HHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCC
Q 024023 94 -----AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 165 (274)
Q Consensus 94 -----~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~ 165 (274)
+.+..........++||+.++|+.| +.+++++|++ ..+...++.+|+..+|+.++++++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~------- 141 (185)
T TIGR02009 71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEG------- 141 (185)
T ss_pred HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCC-------
Confidence 1221111123478999999999888 4788999988 6678899999999999999999887764
Q ss_pred CcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 166 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
||+|+.+..+++++|++|+++++|||+.+|+++|+++|++++++
T Consensus 142 ----------------kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 142 ----------------KPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred ----------------CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999999999999999999999864
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=170.61 Aligned_cols=169 Identities=26% Similarity=0.311 Sum_probs=121.7
Q ss_pred EEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH-----HHHHhcCCCChHHHHH---
Q 024023 23 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFHA--- 94 (274)
Q Consensus 23 ~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--- 94 (274)
+|+||+||||+|+...+..++.+ +.+.+|.+.... ......|.... .+...+...+.+.+.+
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKA-----LADELGIPFDEE-----FNESLKGVSREDSLERILDLGGKKYSEEEKEELAE 70 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHH-----HHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 48999999999988888777765 556667653321 11111222111 1122233333332221
Q ss_pred ----HHhccCC-CCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 95 ----FVHGKLP-YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 95 ----~~~~~~~-~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
.+..... .....++||+.++|+.| +.+++|+|++.. ....++.+|+..+|+.++++++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~-------- 140 (185)
T TIGR01990 71 RKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKG-------- 140 (185)
T ss_pred HHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCC--------
Confidence 1111110 12347899999999988 478999998653 45688999999999999999988765
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
||+|+.+..++++++++|+++++|||+.+|+.+|+++|+.++++.
T Consensus 141 ---------------kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 141 ---------------KPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred ---------------CCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 999999999999999999999999999999999999999999873
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=167.17 Aligned_cols=173 Identities=18% Similarity=0.246 Sum_probs=121.4
Q ss_pred cEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHH---HHH-------h----cCcHH---------
Q 024023 22 ECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL---YRE-------H----GTTMA--------- 78 (274)
Q Consensus 22 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~-------~----~~~~~--------- 78 (274)
|+|+||+||||+|+...+..++.+ +.++.|++..... ....+ +.. + |....
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 74 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCE-----IARKYGVEVSPDE-LEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRD 74 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHH-----HHHHhCCCCCHHH-HHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHH
Confidence 589999999999988888887775 5566777643211 11111 110 0 11110
Q ss_pred HHHHhcCCC--ChHHHHHHHhcc-CCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEec
Q 024023 79 GLKAVGYEF--DNDEFHAFVHGK-LPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF 152 (274)
Q Consensus 79 ~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~ 152 (274)
.+...+... ....+.+.+... .......++||+.++|+.| +.+++|+||++.. ....++.+|+..+|+.++++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s 153 (203)
T TIGR02252 75 TFGRAGVPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTS 153 (203)
T ss_pred HHHhcCCCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEee
Confidence 111122111 111111111111 1123457899999999988 4789999998765 47788999999999999999
Q ss_pred ccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEE
Q 024023 153 ETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVI 224 (274)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~ 224 (274)
++.+.. ||+|+.+..+++++|++|+++++|||+. +|+.+|+++|+.+++
T Consensus 154 ~~~~~~-----------------------KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 154 YEVGAE-----------------------KPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred cccCCC-----------------------CCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 988865 9999999999999999999999999998 899999999999874
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.7e-23 Score=166.26 Aligned_cols=168 Identities=30% Similarity=0.477 Sum_probs=122.8
Q ss_pred EEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcCCCChHHHHHHHhc
Q 024023 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDNDEFHAFVHG 98 (274)
Q Consensus 24 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 98 (274)
|+||+||||+|+...+...+.. .+.+.++.+.. . .......+..... +...+. ....+.+.+.+
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~----~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 69 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQR----LALEEFGLEIS-A----EELRELFGKSYEEALERLLERFGI--DPEEIQELFRE 69 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHH----HHHHHTTHHHH-H----HHHHHHTTSHHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred cEEECCCCcEeCHHHHHHHHHH----HHHHHhCCCCC-H----HHHHHHhCCCHHHHHHHhhhccch--hHHHHHHHhhh
Confidence 7999999999966644444443 34555555421 1 1111112211111 111111 13333333333
Q ss_pred cCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCc
Q 024023 99 KLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 175 (274)
Q Consensus 99 ~~~~~~~~~~~~~~~~L~~l~---~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (274)
........++||+.++|+.|+ .+++++||++...+...++.+|+.++|+.++++++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~----------------- 132 (176)
T PF13419_consen 70 YNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSR----------------- 132 (176)
T ss_dssp HHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSS-----------------
T ss_pred hhhhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhh-----------------
Confidence 221256789999999998884 999999999999999999999999999999999988875
Q ss_pred ccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 176 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 176 ~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
||+++.+..+++++|++|+++++|||+..|+.+|+++|+.+|++
T Consensus 133 ------Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 133 ------KPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp ------TTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred ------hhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 99999999999999999999999999999999999999999986
|
... |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-22 Score=165.83 Aligned_cols=183 Identities=15% Similarity=0.152 Sum_probs=122.9
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHH---HHHH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEF---HAFV 96 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 96 (274)
|+|+|+||+||||+|....+ . .+.+..|++... +...+......... ...+ ...+.. .+.+
T Consensus 1 m~k~viFDlDGTLiD~~~~~----~-----~~~~~~g~~~~~---~~~~~g~~~~~~~~--~~~~--~~~~~~~~~~~~~ 64 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQSGL----P-----YFAQKYNIPTDH---ILKMIQDERFRDPG--ELFG--CDQELAKKLIEKY 64 (197)
T ss_pred CCcEEEEecCCceEchhhcc----H-----HHHHhcCCCHHH---HHHHHhHhhhcCHH--HHhc--ccHHHHHHHhhhh
Confidence 36899999999999944332 2 245567765421 11111111001111 1111 111111 2222
Q ss_pred hccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCC----ccceeEecccCCCCCCCCCCCCcccc
Q 024023 97 HGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED----CFEGIICFETINPRLQPADNTDGIEN 170 (274)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~----~fd~i~~~~~~~~~~~~~~~~~~~~~ 170 (274)
..........++||+.++|+.|+ .+++++|+.+.......++.+++.. +|+.++++++.
T Consensus 65 ~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~--------------- 129 (197)
T PHA02597 65 NNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD--------------- 129 (197)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC---------------
Confidence 21112245679999999999994 5678888887776666777777765 45666666642
Q ss_pred cccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc--CCeEEEECCCCC--CCCccccccCHhHHHH
Q 024023 171 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA--GLHTVIVGSSVP--VPPADHALNSIHNIKE 246 (274)
Q Consensus 171 ~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~--G~~~v~v~~~~~--~~~a~~~~~~l~~l~~ 246 (274)
||||+.+..+++++| ++++++|||+.+|+.+|+++ |++++++.++.. ...++|.+.++.++.+
T Consensus 130 -----------~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 130 -----------ESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGERDHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred -----------cccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhhccccchhhhhccHHHHhc
Confidence 778999999999999 88899999999999999999 999999999875 3367799999988864
|
2 hypothetical protein; Provisional |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=195.28 Aligned_cols=194 Identities=20% Similarity=0.257 Sum_probs=146.3
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHH-----HhcC-CCChHH-
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLK-----AVGY-EFDNDE- 91 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~- 91 (274)
+++++|+|||||||+|+...+..++.+ +++++|++.... .+....|....... ..+. ....+.
T Consensus 73 ~~ikaVIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~it~e-----~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~ 142 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSEEPSRRAAVD-----VFAEMGVEVTVE-----DFVPFMGTGEANFLGGVASVKGVKGFDPDAA 142 (1057)
T ss_pred CCCCEEEECCCCCeEeChHHHHHHHHH-----HHHHcCCCCCHH-----HHHHHhCCCHHHHHHHHHHhcCCCCCCHHHH
Confidence 468999999999999988888777765 556677764321 12233343332211 1111 112222
Q ss_pred ---HHHHHhccCC-CCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCC-CccceeEecccCCCCCCCCC
Q 024023 92 ---FHAFVHGKLP-YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE-DCFEGIICFETINPRLQPAD 163 (274)
Q Consensus 92 ---~~~~~~~~~~-~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~-~~fd~i~~~~~~~~~~~~~~ 163 (274)
+.+.+...+. .....++||+.++|+.| +++++|+||.....+...++.+|+. .+|+.+++++++...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~----- 217 (1057)
T PLN02919 143 KKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENL----- 217 (1057)
T ss_pred HHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccC-----
Confidence 2222222111 11234799999999998 4899999999999999999999996 789999999988765
Q ss_pred CCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCccccc
Q 024023 164 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHAL 238 (274)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~ 238 (274)
||+|+++..+++++|++|++|++|||+.+|+++|+++|++++++.++.. ..++++++
T Consensus 218 ------------------KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi 279 (1057)
T PLN02919 218 ------------------KPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIR 279 (1057)
T ss_pred ------------------CCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEE
Confidence 9999999999999999999999999999999999999999999988754 46789999
Q ss_pred cCHhHHH
Q 024023 239 NSIHNIK 245 (274)
Q Consensus 239 ~~l~~l~ 245 (274)
+++.++.
T Consensus 280 ~~l~el~ 286 (1057)
T PLN02919 280 KDIGNIS 286 (1057)
T ss_pred CChHHCC
Confidence 9999985
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-22 Score=163.37 Aligned_cols=97 Identities=34% Similarity=0.556 Sum_probs=88.5
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
+.++||+.++|+.| |.+++++||++... ...+.++|+..+|+.++++++.+..
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~----------------------- 139 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRG----------------------- 139 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCC-----------------------
Confidence 68899999999888 47899999999888 6666669999999999999888765
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
||+|+.+..+++++|++|+++++|||+..|+.+|+++|+.++++
T Consensus 140 KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 140 KPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 99999999999999999999999999999999999999999874
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=164.29 Aligned_cols=197 Identities=16% Similarity=0.213 Sum_probs=126.2
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcC-cHH-----HHHHhcCCCChHH
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGT-TMA-----GLKAVGYEFDNDE 91 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~ 91 (274)
++++++++||+||||+++. .+. .+.+..|.+... ......... |. ... .+..+ .....+.
T Consensus 11 ~~~~k~iiFD~DGTL~~~~-~~~---------~l~~~~g~~~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~-~~~~~~~ 76 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAE-TID---------EIAKIAGVEEEV-SEITERAMR--GELDFKASLRERVALL-KGLPVEL 76 (219)
T ss_pred hccCCEEEEeCcccCCCch-HHH---------HHHHHhCCHHHH-HHHHHHHHc--CCCCHHHHHHHHHHHh-CCCCHHH
Confidence 4578999999999999953 221 134455553221 111111111 11 000 11111 1222333
Q ss_pred HHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcc
Q 024023 92 FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
+.... +.+.++||+.++|+.| +.+++|+|++....+..+++.+|+..+|+..+..++..
T Consensus 77 ~~~~~------~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~------------ 138 (219)
T TIGR00338 77 LKEVR------ENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGK------------ 138 (219)
T ss_pred HHHHH------hcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCE------------
Confidence 33333 3356899999998887 58899999999999999999999988886544332211
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCcccccc--CHhHHHH
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN--SIHNIKE 246 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~--~l~~l~~ 246 (274)
.++...+....++||+..+..+++++++++++|++|||+.+|+++|+++|+++++.+...-...+++++. ++.++.+
T Consensus 139 -~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~~~i~~~~~~~~~~ 217 (219)
T TIGR00338 139 -LTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKADICINKKDLTDILP 217 (219)
T ss_pred -EEEEecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhchhccCCCCHHHHHh
Confidence 0111122223347899999999999999999999999999999999999998765332222456888866 5566655
Q ss_pred H
Q 024023 247 A 247 (274)
Q Consensus 247 ~ 247 (274)
+
T Consensus 218 ~ 218 (219)
T TIGR00338 218 L 218 (219)
T ss_pred h
Confidence 4
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-21 Score=161.45 Aligned_cols=101 Identities=22% Similarity=0.270 Sum_probs=87.5
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHH--HHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKH--AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~--~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
...++||+.++|+.| |++++|+||+.... ....+...++..+||.++++++.+..
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~-------------------- 151 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLR-------------------- 151 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCC--------------------
Confidence 467899999999888 48899999986543 33344456788899999999888765
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECC
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~ 227 (274)
||+|+.+..+++++|++|++|++|||+..|+.+|+++|++++++.+
T Consensus 152 ---KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 152 ---KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred ---CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999999999999999999999999866
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-20 Score=154.72 Aligned_cols=102 Identities=19% Similarity=0.348 Sum_probs=90.6
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHH-cCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
..++||+.++|+.+ |.+++|+||++.......+.. .++..+||.++++++++..
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~---------------------- 140 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMR---------------------- 140 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCC----------------------
Confidence 35789999999988 488999999998877665554 4778899999999998875
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||+|+.+..+++++|++|+++++|||+..|+.+|+++|+.++++.++.
T Consensus 141 -KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~ 188 (199)
T PRK09456 141 -KPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDKQ 188 (199)
T ss_pred -CCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCCc
Confidence 999999999999999999999999999999999999999999987754
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-20 Score=154.12 Aligned_cols=88 Identities=25% Similarity=0.326 Sum_probs=77.7
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 183 (274)
+.++..++|+.| |.+++|+||++...+...++.+|+..+|+.++++++... ||
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~------------------------KP 162 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP------------------------KP 162 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC------------------------Cc
Confidence 334446666655 689999999999999999999999999999999987653 99
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 218 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~ 218 (274)
+|+.+..+++++|+++++|++|||+.+|+.+|+++
T Consensus 163 ~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 163 NPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999999999999874
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.6e-21 Score=155.17 Aligned_cols=89 Identities=19% Similarity=0.264 Sum_probs=82.4
Q ss_pred CCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 103 EKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
..+.++||+.++|+ +++|+||++...+...++++|+..+|+.++++++++.. |
T Consensus 87 ~~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~-----------------------K 139 (175)
T TIGR01493 87 KNLPPWPDSAAALA----RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAY-----------------------K 139 (175)
T ss_pred hcCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCC-----------------------C
Confidence 34679999999998 47899999999999999999999999999999988775 9
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 218 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~ 218 (274)
|+|+.|..+++++|++|++|++|||+.+|+.+|+++
T Consensus 140 P~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 140 PDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred CCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 999999999999999999999999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-20 Score=157.89 Aligned_cols=185 Identities=18% Similarity=0.207 Sum_probs=131.4
Q ss_pred cCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcCC--CChHHHHHH---Hh
Q 024023 28 LDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYE--FDNDEFHAF---VH 97 (274)
Q Consensus 28 lDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~---~~ 97 (274)
|||||+|+...+..++.+ +++++|++... .......|..... ....+.+ ...+.+.+. +.
T Consensus 1 ~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~-----~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEK-----ILARYGKTFDW-----SLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAML 70 (220)
T ss_pred CCCcceecHHHHHHHHHH-----HHHHcCCCCCH-----HHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 799999988887777765 56677775321 1122233443321 1112222 122222221 11
Q ss_pred ccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHH-HHHHcCCCCccceeEecc--cCCCCCCCCCCCCccccc
Q 024023 98 GKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAME-VLGRLGLEDCFEGIICFE--TINPRLQPADNTDGIENN 171 (274)
Q Consensus 98 ~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~-~l~~~gl~~~fd~i~~~~--~~~~~~~~~~~~~~~~~~ 171 (274)
... .....++||+.++|+.| +++++|+||........ .++..++.++|+.+++++ +++..
T Consensus 71 ~~~-~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~------------- 136 (220)
T PLN02811 71 QDL-FPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQG------------- 136 (220)
T ss_pred HHH-HhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCC-------------
Confidence 111 23567899999999888 58999999998765554 334457888999999999 66654
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhC---CCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHH
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIAN---VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNI 244 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g---~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l 244 (274)
||+|+++..+++++| ++|++|++|||+.+|+++|+++|++++++.++.. ...++++++++.++
T Consensus 137 ----------KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~ 206 (220)
T PLN02811 137 ----------KPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDF 206 (220)
T ss_pred ----------CCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhC
Confidence 999999999999997 9999999999999999999999999999987653 34688888888876
Q ss_pred HH
Q 024023 245 KE 246 (274)
Q Consensus 245 ~~ 246 (274)
..
T Consensus 207 ~~ 208 (220)
T PLN02811 207 KP 208 (220)
T ss_pred CH
Confidence 53
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=143.37 Aligned_cols=151 Identities=22% Similarity=0.257 Sum_probs=109.6
Q ss_pred EEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhccCCC
Q 024023 23 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPY 102 (274)
Q Consensus 23 ~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (274)
+|+||+||||+|+...+..++.+ ..++.+.... .+....|.....+.... ..+.+.. . ..
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~-------~~~~~~g~~~~~~~~~~-----~~~~~~~-~--~~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEE-----TLEEFGEDFQ-------ALKALRGLAEELLYRIA-----TSFEELL-G--YD 60 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHH-----HHHHhcccHH-------HHHHHHccChHHHHHHH-----HHHHHHh-C--cc
Confidence 48999999999988777777765 3334443221 11112222222211110 1122221 1 11
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
.....+||+.++|+.| +.+++|+|++....+...++.+ +..+|+.+++.++.+ .
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~--------------------- 117 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-A--------------------- 117 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-C---------------------
Confidence 2345678999999888 4889999999999999999987 788899999988776 5
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcC
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 219 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G 219 (274)
||+|+.+..+++++|+++ +|++|||+.+|+.+|+++|
T Consensus 118 --Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 118 --KPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred --CcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 999999999999999999 9999999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.83 E-value=8e-19 Score=147.64 Aligned_cols=201 Identities=15% Similarity=0.207 Sum_probs=124.2
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-HHH-hc-CCCChHHHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-LKA-VG-YEFDNDEFHAF 95 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~ 95 (274)
+++|+|+|||||||+++. .+ . .+.+.+|.+.. .......+... ...... +.. ++ .....+.+...
T Consensus 10 ~~~k~viFDfDGTL~~~~-~~----~-----~~~~~~g~~~~-~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDE-GI----D-----ELAEFCGAGEA-VAEWTAKAMGG-SVPFEEALAARLSLFKPSLSQVEEF 77 (224)
T ss_pred ccCCEEEEeCCCcccchH-HH----H-----HHHHHcCChHH-HHHHHHHHHCC-CCCHHHHHHHHHHHcCCCHHHHHHH
Confidence 468999999999999942 22 1 25556665421 11111111110 011111 111 10 11233444444
Q ss_pred HhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCC--CccceeEecccCCCCCCCCCCCCcccc
Q 024023 96 VHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADNTDGIEN 170 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~--~~fd~i~~~~~~~~~~~~~~~~~~~~~ 170 (274)
+.. ....++||+.++|+.+ +.+++|+|++....+..+++.+|+. .+|+..+..++.+.. .
T Consensus 78 ~~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~-----------~ 142 (224)
T PLN02954 78 LEK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEY-----------A 142 (224)
T ss_pred HHH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcE-----------E
Confidence 433 1246889999998887 4789999999999999999999996 356442222211100 0
Q ss_pred cccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCccccccCHhHHH
Q 024023 171 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIK 245 (274)
Q Consensus 171 ~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~~~l~~l~ 245 (274)
+.......+.+++|++.+..+++++|. +++++|||+.+|+.+++++|+.++...++.. ...++++++++.+|.
T Consensus 143 g~~~~~~~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~ 220 (224)
T PLN02954 143 GFDENEPTSRSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLI 220 (224)
T ss_pred CccCCCcccCCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHH
Confidence 001111122357889999999999885 6899999999999999998888765433321 346899999999998
Q ss_pred HHH
Q 024023 246 EAI 248 (274)
Q Consensus 246 ~~l 248 (274)
+++
T Consensus 221 ~~~ 223 (224)
T PLN02954 221 EVL 223 (224)
T ss_pred Hhh
Confidence 753
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.5e-19 Score=143.20 Aligned_cols=120 Identities=22% Similarity=0.242 Sum_probs=96.3
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCCh---------------HHHHHHHHHcCCCCccceeEecc-----cCCCCCCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFE-----TINPRLQP 161 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~---------------~~~~~~l~~~gl~~~fd~i~~~~-----~~~~~~~~ 161 (274)
+.++||+.++|+.| +++++|+||.+. ..+...++.+|+ +|+.++.+. +.+.
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~---- 101 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDC---- 101 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcC----
Confidence 35778999998888 588999999863 334445666776 377777543 2333
Q ss_pred CCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCc--
Q 024023 162 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPA-- 234 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a-- 234 (274)
.||+|+.+..+++++|++++++++|||+.+|+.+|+++|+.++++.++.. ...+
T Consensus 102 -------------------~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~ 162 (181)
T PRK08942 102 -------------------RKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPG 162 (181)
T ss_pred -------------------CCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCC
Confidence 49999999999999999999999999999999999999999999987653 2345
Q ss_pred cccccCHhHHHHHHH
Q 024023 235 DHALNSIHNIKEAIP 249 (274)
Q Consensus 235 ~~~~~~l~~l~~~l~ 249 (274)
++++.++.++.+.+.
T Consensus 163 ~~ii~~l~el~~~l~ 177 (181)
T PRK08942 163 TWVLDSLADLPQALK 177 (181)
T ss_pred ceeecCHHHHHHHHH
Confidence 899999999988654
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.9e-19 Score=146.19 Aligned_cols=113 Identities=14% Similarity=0.115 Sum_probs=88.2
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
.+.++||+.++|+.| |.+++|+|++....+...++.+|+..+|+..+..++.+.. ... ......
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~-----------~p~--~~~~~~ 144 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI-----------QPD--GIVRVT 144 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE-----------ecc--eeeEEc
Confidence 357899999998888 5899999999999999999999998888776665543321 000 000111
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
.++|++.+..+++++|++++++++||||.+|+.+|+.+|+.++..+.+.
T Consensus 145 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 145 FDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred cccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 2456678999999999999999999999999999999999888765544
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-18 Score=141.09 Aligned_cols=121 Identities=17% Similarity=0.157 Sum_probs=95.0
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChH--------HHHHHHHHcCCCCccceeE-ecccCCCCCCCCCCCCcccccc
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQK--------HAMEVLGRLGLEDCFEGII-CFETINPRLQPADNTDGIENNS 172 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~--------~~~~~l~~~gl~~~fd~i~-~~~~~~~~~~~~~~~~~~~~~~ 172 (274)
+.++||+.++|+.| |++++|+||.+.. .....++.+|+..+|.... ++++.+..
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~-------------- 92 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECR-------------- 92 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCC--------------
Confidence 35788999998888 5899999998641 2334466677655443322 34444443
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------------CCCccccccC
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------------VPPADHALNS 240 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------------~~~a~~~~~~ 240 (274)
||+|+.+..++++++++|++|++|||+.+|+.+|+++|+.++++.++.. ...+++++.+
T Consensus 93 ---------KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~ 163 (173)
T PRK06769 93 ---------KPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAEN 163 (173)
T ss_pred ---------CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhC
Confidence 9999999999999999999999999999999999999999999988652 2458899999
Q ss_pred HhHHHHHH
Q 024023 241 IHNIKEAI 248 (274)
Q Consensus 241 l~~l~~~l 248 (274)
+.+|.++|
T Consensus 164 ~~el~~~l 171 (173)
T PRK06769 164 FEDAVNWI 171 (173)
T ss_pred HHHHHHHH
Confidence 99998754
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=153.28 Aligned_cols=131 Identities=14% Similarity=0.090 Sum_probs=96.2
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
.+++.||+.++++.| +++++|+|++........++++|+...+...+...+. . -++.+.+..+.
T Consensus 179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg------------~-ltg~v~g~iv~ 245 (322)
T PRK11133 179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG------------K-LTGNVLGDIVD 245 (322)
T ss_pred hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC------------E-EEeEecCccCC
Confidence 467899999988877 5899999999999899999999886554322211100 0 01111222234
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 248 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l 248 (274)
+|||++.++.+++++|++++++++|||+.||+.|++.+|+++++.....-+..|+++++ ..+|..+|
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad~~i~-~~~l~~~l 312 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQVTIR-HADLMGVL 312 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCCEEec-CcCHHHHH
Confidence 58999999999999999999999999999999999999999887333333677888886 44454443
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.4e-18 Score=143.13 Aligned_cols=183 Identities=15% Similarity=0.227 Sum_probs=124.6
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcC----------c-----HHHH--
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGT----------T-----MAGL-- 80 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----------~-----~~~~-- 80 (274)
.+++|+|+||++|||+...+.....+.+ +.+.+|++... ......+.+.+.. . ....
T Consensus 4 ~~~iravtfD~~~tLl~~~~~~~~~y~~-----i~~~~gl~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~ 77 (237)
T KOG3085|consen 4 LMRIRAVTFDAGGTLLATLPPVMEVYCE-----IAEAYGLEYDD-SLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWP 77 (237)
T ss_pred ccceEEEEEeCCCceeecCCccHHHHHH-----HHHHhCCCCCH-HHHhHhhhHHHHhhcccCCcccccCCcccHHHHHH
Confidence 3578999999999999755555555553 67777877443 2222222222210 0 0000
Q ss_pred -------HHhcCCCChHHHHHHHhccCCC---CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHcCCCCccc
Q 024023 81 -------KAVGYEFDNDEFHAFVHGKLPY---EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFE 147 (274)
Q Consensus 81 -------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~L~~l~---~~~~i~s~~~~~~~~~~l~~~gl~~~fd 147 (274)
...+.....+....+....+.. ......+++.++++.++ ..+.++||.+...- ..+..+|+..+||
T Consensus 78 ~lv~~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD 156 (237)
T KOG3085|consen 78 KLVESTFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFD 156 (237)
T ss_pred HHHHHHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhh
Confidence 0001111111111111111111 23455677778888884 56778888776654 7888899999999
Q ss_pred eeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEEC
Q 024023 148 GIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVG 226 (274)
Q Consensus 148 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~ 226 (274)
.++.+.+.+.. ||+|.+|..+++.+|+.|++|++|||+. ||+++|+++||+++.+.
T Consensus 157 ~vv~S~e~g~~-----------------------KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~ 213 (237)
T KOG3085|consen 157 FVVESCEVGLE-----------------------KPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVD 213 (237)
T ss_pred hhhhhhhhccC-----------------------CCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEc
Confidence 99999999986 9999999999999999999999999999 89999999999999997
Q ss_pred CCCC
Q 024023 227 SSVP 230 (274)
Q Consensus 227 ~~~~ 230 (274)
++..
T Consensus 214 ~~~~ 217 (237)
T KOG3085|consen 214 NSIT 217 (237)
T ss_pred cccc
Confidence 6654
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.2e-18 Score=139.84 Aligned_cols=127 Identities=17% Similarity=0.154 Sum_probs=95.2
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCCh---------------HHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~---------------~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
+.++||+.++|+.| |++++|+||.+. ......+...++. |+.++.+.....
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~--------- 93 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPE--------- 93 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCc---------
Confidence 45778999998888 488999999874 3334556666666 777665432110
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeE-EEECCCCC-----CCCccccccC
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP-----VPPADHALNS 240 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~-v~v~~~~~-----~~~a~~~~~~ 240 (274)
....++.....+||+|+++..+++++|++++++++|||+.+|+++|+++|+.+ +++.++.. ...+++++++
T Consensus 94 ---~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~ 170 (176)
T TIGR00213 94 ---GVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNS 170 (176)
T ss_pred ---ccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEecc
Confidence 00011112223599999999999999999999999999999999999999998 78888764 2468999999
Q ss_pred HhHHH
Q 024023 241 IHNIK 245 (274)
Q Consensus 241 l~~l~ 245 (274)
+.+|.
T Consensus 171 ~~el~ 175 (176)
T TIGR00213 171 LADLP 175 (176)
T ss_pred HHHhh
Confidence 99885
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.7e-18 Score=141.64 Aligned_cols=195 Identities=13% Similarity=0.087 Sum_probs=124.0
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHH-HHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhcc
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRM-CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGK 99 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (274)
+++|+|||||||++ . .|. .+.++.|.+....... ...+...++.....+.. ...+.+.+...+
T Consensus 1 ~~~v~FD~DGTL~~-~-~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~i~~~~--- 64 (205)
T PRK13582 1 MEIVCLDLEGVLVP-E-IWI---------AFAEKTGIPELRATTRDIPDYDVLMKQRLDILDE--HGLGLADIQEVI--- 64 (205)
T ss_pred CeEEEEeCCCCChh-h-HHH---------HHHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHH--cCCCHHHHHHHH---
Confidence 37899999999995 2 221 1445666643210000 00011112222222221 123455555544
Q ss_pred CCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccc
Q 024023 100 LPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 177 (274)
Q Consensus 100 ~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (274)
..+.++||+.++|+.++ .+++|+|++....+...++.+|+..+|+..+...+.+.. .+.
T Consensus 65 ---~~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i---------------~~~- 125 (205)
T PRK13582 65 ---ATLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMI---------------TGY- 125 (205)
T ss_pred ---HhCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeE---------------ECc-
Confidence 34678999999999885 688999999999999999999999888765544321100 000
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccc-cccCHhHHHHHHHHHHhh
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADH-ALNSIHNIKEAIPEIWEG 254 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~-~~~~l~~l~~~l~~~~~~ 254 (274)
.+++|.....++++++..++++++||||.+|+.+++++|++.. +..+.. ...+++ +++++.+|..++.++...
T Consensus 126 ---~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~-~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 201 (205)
T PRK13582 126 ---DLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGIL-FRPPANVIAEFPQFPAVHTYDELLAAIDKASAR 201 (205)
T ss_pred ---cccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEE-ECCCHHHHHhCCcccccCCHHHHHHHHHHHHhh
Confidence 0233344566666777778999999999999999999998765 333332 234555 899999999888776543
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.8e-18 Score=143.22 Aligned_cols=126 Identities=13% Similarity=0.089 Sum_probs=92.2
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCC--cc--ceeEecccCCCCCCCCCCCCcccccccCc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED--CF--EGIICFETINPRLQPADNTDGIENNSFSS 175 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~--~f--d~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (274)
....++||+.++|+.+ +.+++|+|++....+..+++.+ +.. .+ +..++++....
T Consensus 71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~------------------ 131 (219)
T PRK09552 71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI------------------ 131 (219)
T ss_pred hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE------------------
Confidence 3467899999998887 5899999999999999999987 643 11 22233332222
Q ss_pred ccccCCCCCHHH----------HHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECC--C--CCCCCccccccCH
Q 024023 176 NQRILCKPSLEA----------IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS--S--VPVPPADHALNSI 241 (274)
Q Consensus 176 ~~~~~~kp~~~~----------~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~--~--~~~~~a~~~~~~l 241 (274)
.||.|.. ...++++++..++++++||||.+|+.+|+++|+.++ -.. . .....+.+.++++
T Consensus 132 -----~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a-~~~l~~~~~~~~~~~~~~~~f 205 (219)
T PRK09552 132 -----TWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA-RDFLITKCEELGIPYTPFETF 205 (219)
T ss_pred -----eccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee-HHHHHHHHHHcCCCccccCCH
Confidence 2554432 346888899999999999999999999999999544 111 0 0244577889999
Q ss_pred hHHHHHHHHHHh
Q 024023 242 HNIKEAIPEIWE 253 (274)
Q Consensus 242 ~~l~~~l~~~~~ 253 (274)
.++.+.|+.+++
T Consensus 206 ~ei~~~l~~~~~ 217 (219)
T PRK09552 206 HDVQTELKHLLE 217 (219)
T ss_pred HHHHHHHHHHhc
Confidence 999999888765
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.3e-17 Score=135.20 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=88.5
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHc---CCCCccceeEecccCCCCCCCCCCCCcccccccCcc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 176 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (274)
....++||+.++|+.| |.+++|+||++.......++.. ++..+|+.++.. ..+
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~g-------------------- 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TVG-------------------- 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Ccc--------------------
Confidence 3457999999999998 5889999999999888888775 577778877643 222
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC
Q 024023 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~ 230 (274)
.||+|+.+..+++++|++|+++++|||+..|+.+|+++|+.++++.++.+
T Consensus 151 ----~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 151 ----LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGN 200 (220)
T ss_pred ----cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence 39999999999999999999999999999999999999999999876654
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.6e-17 Score=137.66 Aligned_cols=193 Identities=19% Similarity=0.184 Sum_probs=143.4
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-----HHhcCCCChHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-----KAVGYEFDNDEFH 93 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 93 (274)
..+.+++||+||||+|++..+...+.+ +..++|.+.+. . ...+..|...... .....+.+.+++.
T Consensus 8 ~~~~~~lfD~dG~lvdte~~y~~~~~~-----~~~~ygk~~~~-~----~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~ 77 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDLYTEAWQE-----LLDRYGKPYPW-D----VKVKSMGKRTSEAARLFVKKLPDPVSREEFN 77 (222)
T ss_pred cceeeEEEecCCcEEecHHHHHHHHHH-----HHHHcCCCChH-H----HHHHHcCCCHHHHHHHHHhhcCCCCCHHHHH
Confidence 357899999999999988888887775 77788874432 1 2222344433222 2234566666665
Q ss_pred HHHhccCC--CCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcC-CCCccceeEe--cccCCCCCCCCCCC
Q 024023 94 AFVHGKLP--YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLG-LEDCFEGIIC--FETINPRLQPADNT 165 (274)
Q Consensus 94 ~~~~~~~~--~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~g-l~~~fd~i~~--~~~~~~~~~~~~~~ 165 (274)
...+.... .....+.||+.++++.| +.++.++|+.+.......+++++ +...|+.++. .+++..
T Consensus 78 ~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~-------- 149 (222)
T KOG2914|consen 78 KEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKN-------- 149 (222)
T ss_pred HHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccC--------
Confidence 44333221 35678889999999988 48899999999988888888876 6677888777 344444
Q ss_pred CcccccccCcccccCCCCCHHHHHHHHHHhCCCC-CeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccC
Q 024023 166 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNS 240 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~-~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~ 240 (274)
+||.|++|..+++.+|..+ +.|++++|++..+++|+++|++++++++..- ..+++.++++
T Consensus 150 ---------------gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~ 214 (222)
T KOG2914|consen 150 ---------------GKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILES 214 (222)
T ss_pred ---------------CCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceeccc
Confidence 5999999999999999998 9999999999999999999999999988432 4556666666
Q ss_pred HhHH
Q 024023 241 IHNI 244 (274)
Q Consensus 241 l~~l 244 (274)
+.+.
T Consensus 215 ~~~~ 218 (222)
T KOG2914|consen 215 LEDF 218 (222)
T ss_pred cccc
Confidence 6554
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.2e-18 Score=134.12 Aligned_cols=100 Identities=22% Similarity=0.283 Sum_probs=79.0
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCCh---------------HHHHHHHHHcCCCCc--cceeE-ecccCCCCCCCCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDC--FEGII-CFETINPRLQPADN 164 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~---------------~~~~~~l~~~gl~~~--fd~i~-~~~~~~~~~~~~~~ 164 (274)
.++||+.++|+.| +++++|+||.+. ..+...++.+|+... |.... +++..+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~------- 99 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSC------- 99 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCC-------
Confidence 4678888888887 589999999873 456677888888621 11111 1233333
Q ss_pred CCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCC
Q 024023 165 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 228 (274)
Q Consensus 165 ~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~ 228 (274)
.||+|+++..+++++|+++++|++|||+..|+++|+++|+.+++++.|
T Consensus 100 ----------------~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 100 ----------------RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred ----------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 399999999999999999999999999999999999999999998764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.6e-18 Score=135.01 Aligned_cols=104 Identities=17% Similarity=0.247 Sum_probs=89.5
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCC-ChHHHHHHHHHcCCC---------CccceeEecccCCCCCCCCCCCCccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNA-DQKHAMEVLGRLGLE---------DCFEGIICFETINPRLQPADNTDGIE 169 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~-~~~~~~~~l~~~gl~---------~~fd~i~~~~~~~~~~~~~~~~~~~~ 169 (274)
....++||+.++|+.| |.+++|+|+. ....++..++.+|+. ++|+.++++++....
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~----------- 110 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKA----------- 110 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchH-----------
Confidence 4567899999999988 4789999998 888889999999998 999999998875432
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHh--CCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIA--NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~--g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||.+..++.+.+.+ |++|++|+||||+..|+.+|+++|+.++++.++.
T Consensus 111 ------------kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 111 ------------KQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred ------------HHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 66667777776666 7999999999999999999999999999998864
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.4e-17 Score=133.84 Aligned_cols=193 Identities=14% Similarity=0.116 Sum_probs=131.1
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHH---HhcCcHHHHHHhcCCCChHHHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYR---EHGTTMAGLKAVGYEFDNDEFHAF 95 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 95 (274)
++.++++|||||||++ ...+. .+.+..|........ ...... .+..........-...+.+.+.++
T Consensus 3 ~~~~L~vFD~D~TLi~-~~~~~---------~~~~~~g~~~~v~~~-t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~ 71 (212)
T COG0560 3 RMKKLAVFDLDGTLIN-AELID---------ELARGAGVGEEVLAI-TERAMRGELDFEESLRLRVALLKGLPVEVLEEV 71 (212)
T ss_pred CccceEEEecccchhh-HHHHH---------HHHHHhCCHHHHHHH-HHHHhcccccHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3568999999999999 21111 134444443321111 111111 011111111112223344455554
Q ss_pred HhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccc
Q 024023 96 VHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 172 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~ 172 (274)
..+. .++.|++.++++.+ |.+++|+|++....+..+.+.+|++..+...+..++ +. .++
T Consensus 72 ~~~~-----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~------------ltG 133 (212)
T COG0560 72 REEF-----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GK------------LTG 133 (212)
T ss_pred HHhc-----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CE------------Eec
Confidence 4321 67888988887777 699999999999999999999999988888777776 42 567
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccC
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 240 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~ 240 (274)
...+..+.++.|...+.++++++|+++++++++|||.||+.|.+.+|.+.+..+.+.-...++.....
T Consensus 134 ~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~~a~~~~~~ 201 (212)
T COG0560 134 RVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRALADVRIWP 201 (212)
T ss_pred eeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHHHHHHhcCh
Confidence 77777888888999999999999999999999999999999999999998766554433333333333
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-16 Score=133.32 Aligned_cols=98 Identities=17% Similarity=0.144 Sum_probs=80.9
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCC----ChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNA----DQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 175 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~----~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (274)
....+.+++.++|+.+ |.+++++||. ....+..+++.+|+..+|+.++++++....
T Consensus 111 ~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~----------------- 173 (237)
T TIGR01672 111 EFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQY----------------- 173 (237)
T ss_pred cCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCC-----------------
Confidence 3446777799998888 5889999998 666888888999999999999998876543
Q ss_pred ccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC
Q 024023 176 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 176 ~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~ 230 (274)
||++. .+++++|+ +++|||+.+|+.+|+++|+.++.+.|+..
T Consensus 174 ------Kp~~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~ 215 (237)
T TIGR01672 174 ------QYTKT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRASN 215 (237)
T ss_pred ------CCCHH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence 77664 45677776 79999999999999999999999987764
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.9e-17 Score=128.77 Aligned_cols=100 Identities=17% Similarity=0.368 Sum_probs=85.6
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCC---------------hHHHHHHHHHcCCCCccceeE-e----cccCCCCCCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGII-C----FETINPRLQP 161 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~---------------~~~~~~~l~~~gl~~~fd~i~-~----~~~~~~~~~~ 161 (274)
+.++||+.++|+.| |++++|+||.+ ...+...++.+|+. |+.++ + +++...+
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~--- 102 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCR--- 102 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCC---
Confidence 46788999998888 48899999963 45677788999997 87665 4 3555554
Q ss_pred CCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 162 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||+++.+..++++++++++++++|||+.+|+.+|+++|++++++.+++
T Consensus 103 --------------------KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 103 --------------------KPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred --------------------CCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence 999999999999999999999999999999999999999999998765
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-16 Score=123.00 Aligned_cols=94 Identities=21% Similarity=0.355 Sum_probs=78.7
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCC--------hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNAD--------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFS 174 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~--------~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (274)
.++|++.++|+.| |++++++||++ ...+...++.+|+. ++.++.+. +.
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~----------------- 83 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC----------------- 83 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC-----------------
Confidence 4667788877776 58999999998 77888899999986 34444333 33
Q ss_pred cccccCCCCCHHHHHHHHHHh-CCCCCeEEEEcC-ChhcHHHHHHcCCeEEEEC
Q 024023 175 SNQRILCKPSLEAIETAIRIA-NVDPKKTIFFDD-SARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 175 ~~~~~~~kp~~~~~~~~l~~~-g~~~~~~i~VGD-s~~Di~~a~~~G~~~v~v~ 226 (274)
.||+++.+..+++++ +++|+++++||| +.+|+.+|+++|+.++++.
T Consensus 84 ------~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 84 ------RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred ------CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 399999999999999 599999999999 6899999999999999875
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.70 E-value=4e-16 Score=129.10 Aligned_cols=141 Identities=11% Similarity=0.088 Sum_probs=95.4
Q ss_pred CCChHHHHHHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCC
Q 024023 86 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 163 (274)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~ 163 (274)
..+.+.+.+.+ ..++++||+.++++.++ .+++|+|++....+..+++.+|+..+|...+..++.+.
T Consensus 54 g~~~~~i~~~~------~~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~------ 121 (203)
T TIGR02137 54 GLKLGDIQEVI------ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR------ 121 (203)
T ss_pred CCCHHHHHHHH------HhCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCe------
Confidence 44556665554 34578999999999884 58999999999999999999999887764322221010
Q ss_pred CCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCH
Q 024023 164 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSI 241 (274)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l 241 (274)
..+.....++.+......+++.|. ++++||||.||+.+++.+|.++++...+.- .+.---++.+.
T Consensus 122 ----------~tG~~~~~~~~K~~~l~~l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~~~ 188 (203)
T TIGR02137 122 ----------VVGYQLRQKDPKRQSVIAFKSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTY 188 (203)
T ss_pred ----------eECeeecCcchHHHHHHHHHhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcccCH
Confidence 000000124444434444456553 799999999999999999999887765443 33333457788
Q ss_pred hHHHHHHHHH
Q 024023 242 HNIKEAIPEI 251 (274)
Q Consensus 242 ~~l~~~l~~~ 251 (274)
++|...+...
T Consensus 189 ~~~~~~~~~~ 198 (203)
T TIGR02137 189 EDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHH
Confidence 8888776655
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=124.48 Aligned_cols=120 Identities=15% Similarity=0.125 Sum_probs=85.4
Q ss_pred CChHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCC
Q 024023 87 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 163 (274)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~ 163 (274)
...+.+...+. .++++|++.++|+.| +.+++|+|++....+...++.+|+.++|+.+++++.....
T Consensus 59 ~~~~~~~~~~~------~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~----- 127 (188)
T TIGR01489 59 LKEDEILEVLK------SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDN----- 127 (188)
T ss_pred CCHHHHHHHHH------hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECC-----
Confidence 34445555542 357889999998887 5889999999999999999999999999999987542210
Q ss_pred CCCcccccccCc----ccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeE
Q 024023 164 NTDGIENNSFSS----NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 222 (274)
Q Consensus 164 ~~~~~~~~~~~~----~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~ 222 (274)
+++....... .....+.+|++.++++++++ ++++++|||+.+|+.+|+++++-+
T Consensus 128 --~g~~~~~~~~~~~~~~~~~g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 128 --DGRHIVWPHHCHGCCSCPCGCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred --CCcEEEecCCCCccCcCCCCCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 0111100000 01223456788888888765 799999999999999999987644
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.6e-16 Score=118.95 Aligned_cols=116 Identities=27% Similarity=0.362 Sum_probs=92.3
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
....+++++.++|+.| +.+++++|++....+...++.+|+..+++.+++.+..... ..............
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~~~ 93 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY-------YPKEGLFLGGGPFD 93 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh-------cccccccccccccc
Confidence 4567888999988888 4789999999999999999999998888888877644321 00001112233344
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
.+||++..+..++++++..++++++|||+.+|+.+++++|+.++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 94 IGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred cCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 5599999999999999999999999999999999999999998864
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.6e-15 Score=124.18 Aligned_cols=109 Identities=12% Similarity=0.095 Sum_probs=87.1
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccce-eEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG-IICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
..++|++.++++.+ +.+++|+|++....++.+++.+|+..+|.. +...++ +. .++...+..+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~-g~------------~~g~~~~~~~~ 152 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESED-GI------------YTGNIDGNNCK 152 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCC-CE------------EeCCccCCCCC
Confidence 36789999998876 588999999999999999999999877655 222121 11 23444445567
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
+++|...+..++++.++++++++++|||.+|+++++.+|..++..+
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 8889999999999999999999999999999999999998876443
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.2e-16 Score=124.43 Aligned_cols=93 Identities=20% Similarity=0.189 Sum_probs=77.3
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChH------------HHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccccc
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQK------------HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 171 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~------------~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
++||+.++|+.| |++++|+||++.. .+...++.+|+. ++.++++++...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~-------------- 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLY-------------- 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCC--------------
Confidence 578888888887 5889999998763 467788999985 356666654433
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhC--CCCCeEEEEcCCh--------hcHHHHHHcCCeEEE
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIAN--VDPKKTIFFDDSA--------RNIASAKAAGLHTVI 224 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g--~~~~~~i~VGDs~--------~Di~~a~~~G~~~v~ 224 (274)
+||+|+.+..+++++| ++++++++|||+. +|+++|+++|+.+++
T Consensus 107 ---------~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 107 ---------RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred ---------CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 3999999999999999 9999999999996 699999999999875
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.4e-15 Score=124.85 Aligned_cols=125 Identities=13% Similarity=0.084 Sum_probs=87.0
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc---ceeEecccCCCCCCCCCCCCcccccccCccc
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF---EGIICFETINPRLQPADNTDGIENNSFSSNQ 177 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f---d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (274)
...++||+.++++.+ +.+++|+|++....+..+++.++....+ +.++..+.+..
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~-------------------- 127 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI-------------------- 127 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE--------------------
Confidence 367889999998888 5889999999999999999887543222 12222222211
Q ss_pred ccCCCCCHHHH----------HHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCC-----CCCCCccccccCHh
Q 024023 178 RILCKPSLEAI----------ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS-----VPVPPADHALNSIH 242 (274)
Q Consensus 178 ~~~~kp~~~~~----------~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~-----~~~~~a~~~~~~l~ 242 (274)
.+|.+..+ ..++++++..++++++||||.+|+.+|+.+|+.++ ... .....+...++++.
T Consensus 128 ---~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~a--r~~l~~~~~~~~~~~~~~~~f~ 202 (214)
T TIGR03333 128 ---DWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFA--RDYLLNECEELGLNHAPFQDFY 202 (214)
T ss_pred ---eCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEe--hHHHHHHHHHcCCCccCcCCHH
Confidence 24444332 46667777788999999999999999999998333 211 12333667789999
Q ss_pred HHHHHHHHHHh
Q 024023 243 NIKEAIPEIWE 253 (274)
Q Consensus 243 ~l~~~l~~~~~ 253 (274)
|+.++|+++++
T Consensus 203 di~~~l~~~~~ 213 (214)
T TIGR03333 203 DVRKELENVKE 213 (214)
T ss_pred HHHHHHHHHhc
Confidence 99988887653
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.9e-16 Score=132.49 Aligned_cols=121 Identities=14% Similarity=0.201 Sum_probs=90.0
Q ss_pred ChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCC
Q 024023 108 DPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 184 (274)
Q Consensus 108 ~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~ 184 (274)
++++.+.++.+ +.+++++||.+.......+..+|...+|+.+.+..... ....+||+
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~--------------------~~~~gKP~ 181 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTK--------------------ATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCC--------------------ceeecCCC
Confidence 45666655555 25567777776665554445556666666555433221 11236999
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHHHHHH
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI 248 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l~~~l 248 (274)
|.++..+++++|++|+++++|||+. +|+.+|+++|+.++++.+|.. ...++++++++.+|.+++
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 9999999999999999999999997 999999999999999988742 346899999999998754
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.5e-14 Score=117.02 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=79.0
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcc-ccc
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN-QRI 179 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 179 (274)
.+.+.|++.++++.+ +.+++|+|++....+...++.+|+..+|...+..++.+. .++.... ...
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~------------~~g~~~~~~~~ 138 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGL------------LTGPIEGQVNP 138 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCE------------EeCccCCcccC
Confidence 345789999998877 588999999999999999999999877766555532221 1111111 234
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 218 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~ 218 (274)
.+..|+..+..++++.|++++++++||||.+|+.+++.+
T Consensus 139 ~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 139 EGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred CcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 457778899999999999999999999999999998754
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.5e-15 Score=117.23 Aligned_cols=111 Identities=18% Similarity=0.231 Sum_probs=89.2
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHH
Q 024023 111 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190 (274)
Q Consensus 111 ~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 190 (274)
+.+.|+.-+.+++|+|+.+...+...++.+|+..+|+. .+|+++.+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~--------------------------------~~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG--------------------------------QSNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec--------------------------------ccchHHHHHH
Confidence 44556666799999999999999999999999877642 1788999999
Q ss_pred HHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH---HHHHHHHHHhh
Q 024023 191 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN---IKEAIPEIWEG 254 (274)
Q Consensus 191 ~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~---l~~~l~~~~~~ 254 (274)
+++++|++++++++|||+.+|+.+++++|+. +.+.+... +..+++++.+-.. +.++++++...
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~~~ 151 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHPLLIPRADYVTRIAGGRGAVREVCELLLLA 151 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHHHHh
Confidence 9999999999999999999999999999998 55554433 5567888776654 66666666543
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.8e-14 Score=116.14 Aligned_cols=93 Identities=19% Similarity=0.260 Sum_probs=76.1
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCC-hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNAD-QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~-~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
.++|++.++|+.| +.+++|+||++ ...+..+++.+|+..++ +. .
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~-----------------------~ 90 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA-----------------------V 90 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC-----------------------C
Confidence 3456677666666 58899999998 56677777777764321 12 3
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~ 230 (274)
||+|+.+..+++++|++++++++|||+. +|+.+|+++|+.++++.++..
T Consensus 91 KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 91 KPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred CCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence 9999999999999999999999999998 799999999999999988774
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.1e-14 Score=120.89 Aligned_cols=109 Identities=17% Similarity=0.203 Sum_probs=84.8
Q ss_pred hHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCC----hHHHHHHHHHcCC--CCccceeEecccCCCCC
Q 024023 89 NDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNAD----QKHAMEVLGRLGL--EDCFEGIICFETINPRL 159 (274)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~----~~~~~~~l~~~gl--~~~fd~i~~~~~~~~~~ 159 (274)
.+.+++++.+.. .....|+||+.++|+.+ |.+++++|+.+ ......+++.+|+ .++|+.++++++. .
T Consensus 98 ~~~fw~~y~~~~-~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~- 173 (237)
T PRK11009 98 NQKFWEKMNNGW-DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--G- 173 (237)
T ss_pred hHHHHHHHHhcc-cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--C-
Confidence 456666665542 34578999999999988 58899999954 4466677777999 7889888887753 2
Q ss_pred CCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC
Q 024023 160 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~ 230 (274)
||.+. .+++++++ +++|||+.+|+.+|+++|+.++.+.|+..
T Consensus 174 ----------------------K~~K~---~~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 174 ----------------------QYTKT---QWLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred ----------------------CCCHH---HHHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence 66554 35566776 89999999999999999999999988775
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.3e-15 Score=121.86 Aligned_cols=105 Identities=17% Similarity=0.269 Sum_probs=85.2
Q ss_pred HHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHH
Q 024023 113 NLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAI 192 (274)
Q Consensus 113 ~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l 192 (274)
+.|+..+++++|+|+.+...+...++.+|+..+|+ + .+++++.+..++
T Consensus 58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~----g----------------------------~~~k~~~l~~~~ 105 (183)
T PRK09484 58 RCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ----G----------------------------QSNKLIAFSDLL 105 (183)
T ss_pred HHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec----C----------------------------CCcHHHHHHHHH
Confidence 33445678999999999999999999999877664 1 267789999999
Q ss_pred HHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcccccc------CHhHHHHHHHH
Q 024023 193 RIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN------SIHNIKEAIPE 250 (274)
Q Consensus 193 ~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~------~l~~l~~~l~~ 250 (274)
+++|+++++++||||+.+|+.+++++|+.++ +.+... ...+++++. .+.++.+.|..
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VADAHPLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999954 544332 456888886 57787776553
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.3e-15 Score=120.67 Aligned_cols=95 Identities=15% Similarity=0.141 Sum_probs=81.0
Q ss_pred HHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHH
Q 024023 113 NLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAI 192 (274)
Q Consensus 113 ~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l 192 (274)
..|+..+.+++|+|+.+...++..++.+|+..+|+. .||+|+.+..++
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~--------------------------------~kpkp~~~~~~~ 91 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG--------------------------------IKKKTEPYAQML 91 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec--------------------------------CCCCHHHHHHHH
Confidence 556677899999999999999999999999877762 178899999999
Q ss_pred HHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCcccccc
Q 024023 193 RIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALN 239 (274)
Q Consensus 193 ~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~ 239 (274)
+++|++++++++|||+.||+.+++.+|++++..+.... +..++++..
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~ 139 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTT 139 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcC
Confidence 99999999999999999999999999999886654433 455666654
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.5e-15 Score=133.93 Aligned_cols=73 Identities=16% Similarity=0.176 Sum_probs=64.8
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC------C----CCccccccCHhHHHH
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP------V----PPADHALNSIHNIKE 246 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~------~----~~a~~~~~~l~~l~~ 246 (274)
...+||+|.++..++++++++++++++|||+. +|+.+|+++|++++++.+|.. . ..++++++++.+|.+
T Consensus 226 ~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~ 305 (311)
T PLN02645 226 LVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLT 305 (311)
T ss_pred ccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHH
Confidence 44579999999999999999999999999998 999999999999999988764 1 468999999999988
Q ss_pred HHHH
Q 024023 247 AIPE 250 (274)
Q Consensus 247 ~l~~ 250 (274)
+++.
T Consensus 306 ~~~~ 309 (311)
T PLN02645 306 LKAA 309 (311)
T ss_pred Hhhc
Confidence 6653
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.5e-15 Score=129.73 Aligned_cols=65 Identities=26% Similarity=0.358 Sum_probs=57.8
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC-----C---------CCccccccCHhHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-----V---------PPADHALNSIHNI 244 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~-----~---------~~a~~~~~~l~~l 244 (274)
.+||+|+.+..+++++|+++++++||||+. +||.+|+++|+.++++.||.. . ..|+++++++.+|
T Consensus 200 ~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 200 VGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred cCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 469999999999999999999999999995 999999999999999998864 1 3588999888764
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.8e-14 Score=124.63 Aligned_cols=99 Identities=17% Similarity=0.318 Sum_probs=81.6
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCC---------------ChHHHHHHHHHcCCCCccceeEec-----ccCCCCCC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNA---------------DQKHAMEVLGRLGLEDCFEGIICF-----ETINPRLQ 160 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~---------------~~~~~~~~l~~~gl~~~fd~i~~~-----~~~~~~~~ 160 (274)
...++||+.++|+.| +++++|+||. ....+..+++.+|+. |+.++.+ ++...
T Consensus 28 ~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~--- 102 (354)
T PRK05446 28 KLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSC--- 102 (354)
T ss_pred cceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCC---
Confidence 357889999998888 4889999995 244566677888884 7766543 33333
Q ss_pred CCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECC
Q 024023 161 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~ 227 (274)
+||+|..+..+++++++++++++||||+.+|+.+|+++|+++++++.
T Consensus 103 --------------------rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 103 --------------------RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR 149 (354)
T ss_pred --------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence 49999999999999999999999999999999999999999999954
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.8e-14 Score=122.48 Aligned_cols=102 Identities=17% Similarity=0.153 Sum_probs=91.0
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCC-ccceeEeccc-------CCCCCCCCCCCCccccccc
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFET-------INPRLQPADNTDGIENNSF 173 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~-~fd~i~~~~~-------~~~~~~~~~~~~~~~~~~~ 173 (274)
..++|++.++|+.| |.+++++|+.+.......++.+++.+ +|+.+++.+. ...
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~---------------- 249 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGD---------------- 249 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCC----------------
Confidence 46788999998888 58899999999999999999999997 8999988873 223
Q ss_pred CcccccCCCCCHHHHHHHHHHhCC-CCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 174 SSNQRILCKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 174 ~~~~~~~~kp~~~~~~~~l~~~g~-~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+||+|+.+..++++++. .+++|++|||+.+|+.+|+++|+.++++.||.
T Consensus 250 -------~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 250 -------KRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred -------CCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence 49999999999999998 67999999999999999999999999998875
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.7e-14 Score=107.87 Aligned_cols=85 Identities=19% Similarity=0.178 Sum_probs=73.8
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCC-ChHHHHHHHHHcC-------CCCccceeEecccCCCCCCCCCCCCcccccccC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNA-DQKHAMEVLGRLG-------LEDCFEGIICFETINPRLQPADNTDGIENNSFS 174 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~-~~~~~~~~l~~~g-------l~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (274)
.++||+.++|+.| +++++|+|++ ....+...++..+ +..+|+.++++++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~-------------------- 88 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW-------------------- 88 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC--------------------
Confidence 5778999998888 5889999999 8888888889888 7888988887752
Q ss_pred cccccCCCCCHHHHHHHHHHhC--CCCCeEEEEcCChhcHHHHHH
Q 024023 175 SNQRILCKPSLEAIETAIRIAN--VDPKKTIFFDDSARNIASAKA 217 (274)
Q Consensus 175 ~~~~~~~kp~~~~~~~~l~~~g--~~~~~~i~VGDs~~Di~~a~~ 217 (274)
+|+|+.+..+++++| +.|++|++|||+..|+...+.
T Consensus 89 -------~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 89 -------LPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred -------CcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 788999999999999 999999999999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3e-13 Score=113.39 Aligned_cols=129 Identities=17% Similarity=0.254 Sum_probs=91.4
Q ss_pred CChHHHHHHHhccCCCCCCCCChhHHHHHHhC-----CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccC----CC
Q 024023 87 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM-----PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETI----NP 157 (274)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l-----~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~----~~ 157 (274)
...+.+.+.+ +.+++.||+.++++.+ +..++|+|++...++..+|+..|+.++|+.|++..-. |.
T Consensus 58 vt~~~I~~~l------~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~ 131 (234)
T PF06888_consen 58 VTPEDIRDAL------RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGR 131 (234)
T ss_pred CCHHHHHHHH------HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCce
Confidence 5677777666 5578899999999888 3779999999999999999999999999999886411 10
Q ss_pred C-CCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHh---CCCCCeEEEEcCChhcHHHHHHcCCe-EEEECCCC
Q 024023 158 R-LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGLH-TVIVGSSV 229 (274)
Q Consensus 158 ~-~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~---g~~~~~~i~VGDs~~Di~~a~~~G~~-~v~v~~~~ 229 (274)
. .+|-.. ..|..++...|+ ...++++++.. |...++++|||||.||+-++...+-. .++...++
T Consensus 132 l~v~pyh~----h~C~~C~~NmCK----~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~ 200 (234)
T PF06888_consen 132 LRVRPYHS----HGCSLCPPNMCK----GKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGY 200 (234)
T ss_pred EEEeCccC----CCCCcCCCccch----HHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCC
Confidence 0 000000 122233333333 45777777763 78889999999999999999886654 44444454
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.6e-14 Score=120.39 Aligned_cols=73 Identities=27% Similarity=0.388 Sum_probs=66.9
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHHHHHH
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI 248 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l~~~l 248 (274)
...|||.+.+++.++++++.+++++++|||+. +||.+|+++|+.+++|.+|.. ...++|+++++.++...+
T Consensus 186 ~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~ 265 (269)
T COG0647 186 TVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITAL 265 (269)
T ss_pred cccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhh
Confidence 68899999999999999999999999999999 899999999999999988875 356899999999998876
Q ss_pred HH
Q 024023 249 PE 250 (274)
Q Consensus 249 ~~ 250 (274)
+.
T Consensus 266 ~~ 267 (269)
T COG0647 266 KE 267 (269)
T ss_pred hc
Confidence 54
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.9e-13 Score=116.87 Aligned_cols=68 Identities=21% Similarity=0.329 Sum_probs=59.7
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC------C--CCccccccCHhHH
Q 024023 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP------V--PPADHALNSIHNI 244 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~------~--~~a~~~~~~l~~l 244 (274)
....+||+|++++.++++++++++++++|||+. +|+.+|+++|+.++++.+|.. . ..++++++++.++
T Consensus 173 ~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 173 PVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred ccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 355689999999999999999999999999997 899999999999999998863 1 4688888888764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.4e-14 Score=121.21 Aligned_cols=69 Identities=25% Similarity=0.278 Sum_probs=62.2
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHHH
Q 024023 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIK 245 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l~ 245 (274)
....+||+|+.+..++++++++++++++|||+. +|+.+|+++|+.++++.+|.. ...++++++++.+|.
T Consensus 169 ~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el~ 246 (248)
T PRK10444 169 PFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADID 246 (248)
T ss_pred ccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHhh
Confidence 345689999999999999999999999999997 899999999999999998874 257999999999873
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.6e-13 Score=110.80 Aligned_cols=104 Identities=13% Similarity=0.046 Sum_probs=82.7
Q ss_pred CCCChhHHHHHH-hC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 105 LKPDPVLRNLLL-SM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 105 ~~~~~~~~~~L~-~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
..++||+.+.|+ .+ |.+++|+|+++...+...++.+|+.. .+.+++++-.. .+++++.+..|+
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~------------~~tg~~~g~~c~ 160 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQR------------RYGGWVLTLRCL 160 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEE------------EEccEECCccCC
Confidence 567999999994 44 57999999999999999999998633 45667665111 267888888999
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEE
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 224 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~ 224 (274)
|..|...+++++ |.+.+.+.+.|||.+|+++...+|-+.+.
T Consensus 161 g~~K~~~l~~~~---~~~~~~~~aY~Ds~~D~pmL~~a~~~~~v 201 (211)
T PRK11590 161 GHEKVAQLERKI---GTPLRLYSGYSDSKQDNPLLYFCQHRWRV 201 (211)
T ss_pred ChHHHHHHHHHh---CCCcceEEEecCCcccHHHHHhCCCCEEE
Confidence 988877776666 56778889999999999999999977653
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.48 E-value=9.7e-14 Score=115.37 Aligned_cols=87 Identities=22% Similarity=0.308 Sum_probs=73.5
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
.++.|++.++|+.| |++++++|+.+...+....+.+|+. +.++.+... .
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~---~~~v~a~~~--~----------------------- 177 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF---DSIVFARVI--G----------------------- 177 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---SEEEEESHE--T-----------------------
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---ccccccccc--c-----------------------
Confidence 35678999988887 5789999999999999999999994 333333211 2
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 219 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G 219 (274)
||.+.++..+++.+++++.+|+||||+.||+.|+++||
T Consensus 178 kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 178 KPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp TTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99999999999999999999999999999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.8e-13 Score=115.48 Aligned_cols=60 Identities=13% Similarity=0.210 Sum_probs=50.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNS 240 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~ 240 (274)
+..|+.+++.+++.+|++++++++|||+.||++|++.+|+++++.+.... +..++++..+
T Consensus 155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~ 215 (230)
T PRK01158 155 GVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEK 215 (230)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecC
Confidence 57889999999999999999999999999999999999998775544333 5567777655
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.2e-13 Score=92.74 Aligned_cols=65 Identities=31% Similarity=0.467 Sum_probs=60.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCC-hhcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI 244 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs-~~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l 244 (274)
.+||+|.++..++++++++++++++|||+ .+||.+|+++|+.++++.+|.. ...++++++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 36999999999999999999999999999 7999999999999999998774 35899999999885
|
... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-12 Score=113.34 Aligned_cols=70 Identities=19% Similarity=0.162 Sum_probs=54.1
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI 251 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~~~ 251 (274)
+..|+.+++.+++.+|++++++++|||+.||++|++.+|+++++-+ +.. +..|++++.+-.+ +..+|+++
T Consensus 197 ~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgn-a~~~lk~~Ad~v~~~n~~dGv~~~l~~~ 270 (272)
T PRK10530 197 GNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGN-ADDAVKARADLVIGDNTTPSIAEFIYSH 270 (272)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecC-chHHHHHhCCEEEecCCCCcHHHHHHHH
Confidence 3567889999999999999999999999999999999998766543 332 5568888765443 44455443
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.1e-12 Score=100.48 Aligned_cols=79 Identities=19% Similarity=0.334 Sum_probs=70.6
Q ss_pred hCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhC
Q 024023 117 SMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN 196 (274)
Q Consensus 117 ~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g 196 (274)
..|.+++|+||..+..+...++++|+. +++.+ .||.+..+..++++++
T Consensus 60 ~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~A----------------------------~KP~~~~fr~Al~~m~ 107 (175)
T COG2179 60 EAGIKVVVVSNNKESRVARAAEKLGVP----FIYRA----------------------------KKPFGRAFRRALKEMN 107 (175)
T ss_pred hcCCEEEEEeCCCHHHHHhhhhhcCCc----eeecc----------------------------cCccHHHHHHHHHHcC
Confidence 346889999999999999999998874 55554 3999999999999999
Q ss_pred CCCCeEEEEcCCh-hcHHHHHHcCCeEEEECC
Q 024023 197 VDPKKTIFFDDSA-RNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 197 ~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~ 227 (274)
+++++|++|||.. +|+.++..+|+.+|.|..
T Consensus 108 l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 108 LPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred CChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 9999999999999 999999999999999854
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.1e-11 Score=98.53 Aligned_cols=127 Identities=13% Similarity=0.128 Sum_probs=91.3
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCC--ccceeEecccCCCCCCCCCCCCcccccccCccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED--CFEGIICFETINPRLQPADNTDGIENNSFSSNQ 177 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~--~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (274)
.+..+.||++++...| +.+++++|++....+..+...+|+.. .+...+-.+..+. +.+....++
T Consensus 85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk-----------~~gfd~~~p 153 (227)
T KOG1615|consen 85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK-----------YLGFDTNEP 153 (227)
T ss_pred CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc-----------ccccccCCc
Confidence 4567889999998877 58899999999999999999999974 4444333333332 244566667
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHhHHH
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIK 245 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~~l~ 245 (274)
...+-.|++.+..+.+ +...+.++||||+.||+++... |.- ++..+.. ...+.|.+.+|+.|.
T Consensus 154 tsdsggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~a--fi~~~g~~~r~~vk~nak~~~~~f~~L~ 222 (227)
T KOG1615|consen 154 TSDSGGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP-ADA--FIGFGGNVIREGVKANAKWYVTDFYVLG 222 (227)
T ss_pred cccCCccHHHHHHHHh--CCChheeEEecCCccccccCCc-hhh--hhccCCceEcHhhHhccHHHHHHHHHHc
Confidence 6777788889888777 8888999999999999988766 322 3333332 345666666665554
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.6e-11 Score=98.43 Aligned_cols=121 Identities=18% Similarity=0.298 Sum_probs=89.9
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCC---------------hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 167 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~---------------~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~ 167 (274)
.+.|++.+.+..+ +++++++||.+ +......|+..|.. ||.++.+......
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~--id~i~~Cph~p~~--------- 99 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVK--IDGILYCPHHPED--------- 99 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCc--cceEEECCCCCCC---------
Confidence 4455666665555 69999999943 23344566666663 8888877644321
Q ss_pred ccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCccccccCHh
Q 024023 168 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIH 242 (274)
Q Consensus 168 ~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~~~l~ 242 (274)
....+||++.++..+++++++++++.++|||+.+|+++|.++|+..+.+.++.. ....+++++++.
T Consensus 100 ---------~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (181)
T COG0241 100 ---------NCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLA 170 (181)
T ss_pred ---------CCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHH
Confidence 133469999999999999999999999999999999999999999877755543 224567888887
Q ss_pred HHHH
Q 024023 243 NIKE 246 (274)
Q Consensus 243 ~l~~ 246 (274)
++..
T Consensus 171 ~~~~ 174 (181)
T COG0241 171 EFAN 174 (181)
T ss_pred HHHH
Confidence 7773
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.1e-13 Score=111.81 Aligned_cols=61 Identities=16% Similarity=0.130 Sum_probs=50.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSI 241 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l 241 (274)
+.+|+.++..+++++|++++++++|||+.||++|++.+|+.+++-+.... +..++++..+-
T Consensus 147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~ 208 (225)
T TIGR01482 147 GVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESP 208 (225)
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCC
Confidence 47889999999999999999999999999999999999998775544333 56677776543
|
catalyze the same reaction as SPP. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.5e-11 Score=109.05 Aligned_cols=72 Identities=17% Similarity=0.163 Sum_probs=60.6
Q ss_pred cccCCCCCHHHHHHHHHHh--------CC-----CCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC-------CCCcc
Q 024023 177 QRILCKPSLEAIETAIRIA--------NV-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-------VPPAD 235 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~--------g~-----~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~-------~~~a~ 235 (274)
....|||++..++.+++.+ +. ++++++||||++ +||.+|+++|+.+++|.+|.. ...++
T Consensus 228 ~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~ 307 (321)
T TIGR01456 228 YYTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPT 307 (321)
T ss_pred eEEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCC
Confidence 3577999999999988887 43 457999999999 999999999999999988732 23588
Q ss_pred ccccCHhHHHHHH
Q 024023 236 HALNSIHNIKEAI 248 (274)
Q Consensus 236 ~~~~~l~~l~~~l 248 (274)
++++++.++...|
T Consensus 308 ~vv~~l~e~~~~i 320 (321)
T TIGR01456 308 LIVNDVFDAVTKI 320 (321)
T ss_pred EEECCHHHHHHHh
Confidence 9999999988754
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.4e-11 Score=99.63 Aligned_cols=103 Identities=14% Similarity=0.058 Sum_probs=79.1
Q ss_pred CCCChhHHHHHH-hC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecc-cCCCCCCCCCCCCcccccccCccccc
Q 024023 105 LKPDPVLRNLLL-SM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFE-TINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 105 ~~~~~~~~~~L~-~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
..++|++.+.|+ .+ |.+++|+|++....++.+.+..++.+- +.+++++ ++. +++...+.+|
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le~~-------------~gg~~~g~~c 158 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIERG-------------NGGWVLPLRC 158 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeEEe-------------CCceEcCccC
Confidence 467899999995 43 689999999999999999988666442 4566654 211 3366777888
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEE
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 224 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~ 224 (274)
.|..|...+++.+ |.+.+.+.+.|||.+|++|...+|.+.+.
T Consensus 159 ~g~~Kv~rl~~~~---~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 159 LGHEKVAQLEQKI---GSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred CChHHHHHHHHHh---CCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 8887777777666 44667789999999999999999977653
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.5e-11 Score=98.33 Aligned_cols=149 Identities=13% Similarity=0.192 Sum_probs=103.2
Q ss_pred CChHHHHHHHhccCCCCCCCCChhHHHHHHhCC----CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC
Q 024023 87 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 162 (274)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~----~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~ 162 (274)
...+++.+.+ +.++..||+.++++.+. +.++|+|.....++..+|+.+|+.++|+.|++....
T Consensus 71 v~~~~ik~~~------r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~------- 137 (256)
T KOG3120|consen 71 VRIAEIKQVL------RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPAC------- 137 (256)
T ss_pred CCHHHHHHHH------hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcc-------
Confidence 3466666555 56889999999988773 578999999999999999999999999999886521
Q ss_pred CCCCccc-----------ccccCcccccCCCCCHHHHHHHHHH---hCCCCCeEEEEcCChhcHHHHHH-cCCeEEEECC
Q 024023 163 DNTDGIE-----------NNSFSSNQRILCKPSLEAIETAIRI---ANVDPKKTIFFDDSARNIASAKA-AGLHTVIVGS 227 (274)
Q Consensus 163 ~~~~~~~-----------~~~~~~~~~~~~kp~~~~~~~~l~~---~g~~~~~~i~VGDs~~Di~~a~~-~G~~~v~v~~ 227 (274)
+|+-. .|..++...|+++ .+.++..+ -|+..++.+||||+.||+-.... .+..+++...
T Consensus 138 --~da~G~L~v~pyH~~hsC~~CPsNmCKg~----Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRk 211 (256)
T KOG3120|consen 138 --VDASGRLLVRPYHTQHSCNLCPSNMCKGL----VLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRK 211 (256)
T ss_pred --cCCCCcEEeecCCCCCccCcCchhhhhhH----HHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccC
Confidence 11111 3445566566655 44444433 38888999999999999765544 4556666666
Q ss_pred CCC-----------CCCccccccCHhHHHHHHHHHHhh
Q 024023 228 SVP-----------VPPADHALNSIHNIKEAIPEIWEG 254 (274)
Q Consensus 228 ~~~-----------~~~a~~~~~~l~~l~~~l~~~~~~ 254 (274)
+++ -...-...+|=+++...|..+...
T Consensus 212 gfpl~k~~~~~p~~~kasV~~W~sg~d~~~~L~~lik~ 249 (256)
T KOG3120|consen 212 GFPLWKLISANPMLLKASVLEWSSGEDLERILQQLIKT 249 (256)
T ss_pred CCchHhhhhcCcceeeeeEEecccHHHHHHHHHHHHHH
Confidence 664 112334466777777776666443
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.1e-10 Score=100.14 Aligned_cols=122 Identities=15% Similarity=0.078 Sum_probs=84.1
Q ss_pred cCCCChHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCC
Q 024023 84 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQ 160 (274)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~ 160 (274)
+..++.+.+...+.+ ..+.+.||+.++++.| +++++|+|++....+...++.+|+.+.+..+++..-.-.
T Consensus 103 ~~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~--- 175 (277)
T TIGR01544 103 QQAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFD--- 175 (277)
T ss_pred cCCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEEC---
Confidence 445566666666643 4578999999998888 589999999999999999999998766666644321000
Q ss_pred CCCCCCcccccccCcccccCCCCCHH-HHHHHHHHhC--CCCCeEEEEcCChhcHHHHHHc
Q 024023 161 PADNTDGIENNSFSSNQRILCKPSLE-AIETAIRIAN--VDPKKTIFFDDSARNIASAKAA 218 (274)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~kp~~~-~~~~~l~~~g--~~~~~~i~VGDs~~Di~~a~~~ 218 (274)
-++ ..++ .+++.+..-.|.+ .+....+.++ ..+++|++||||.+|+.||...
T Consensus 176 ----~dG-vltG-~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 176 ----EDG-VLKG-FKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ----CCC-eEeC-CCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 000 0122 2233333333444 4556888888 7999999999999999997654
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.7e-11 Score=108.67 Aligned_cols=87 Identities=16% Similarity=0.171 Sum_probs=76.9
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHH----cCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGR----LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~----~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
+++++.++|+.| |+.++|+|+.+...+...++. +++.++|+.+.+..
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~~-------------------------- 85 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSINW-------------------------- 85 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEec--------------------------
Confidence 467788887777 588999999999999999998 88988998876652
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCe
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 221 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~ 221 (274)
||+++.+..+++++|+.+++++||||++.|+.++++++-.
T Consensus 86 --~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 86 --GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred --CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 9999999999999999999999999999999999987653
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.28 E-value=4e-12 Score=100.13 Aligned_cols=93 Identities=16% Similarity=0.072 Sum_probs=82.6
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCC-ccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
.+.++||+.++|+.|+ ++++|+|++....+..+++.+++.. +|+.++++++....
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~---------------------- 100 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFV---------------------- 100 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccccc----------------------
Confidence 3567899999999994 7899999999999999999999865 56999999988764
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeE
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 222 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~ 222 (274)
||+ +..+++++|.+|++|++|||+.+|+.+++++|+..
T Consensus 101 -KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 101 -KGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred -CCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 776 88899999999999999999999999999998764
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.9e-12 Score=106.35 Aligned_cols=60 Identities=13% Similarity=0.175 Sum_probs=49.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNS 240 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~ 240 (274)
+..|..+++.+++.+|++++++++|||+.||++|++.+|+.+++.+.... +..++++..+
T Consensus 145 ~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 145 GVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSN 205 (215)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCC
Confidence 46778899999999999999999999999999999999988776654333 4556776654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.7e-11 Score=102.16 Aligned_cols=72 Identities=21% Similarity=0.243 Sum_probs=55.6
Q ss_pred CCHHHHHHHHHHhCCCC-CeEEEEcCChhcHHHHHHcCCeEEEECCCCCCC----C-c-cccc--cC--HhHHHHHHHHH
Q 024023 183 PSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVPVP----P-A-DHAL--NS--IHNIKEAIPEI 251 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~-~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~----~-a-~~~~--~~--l~~l~~~l~~~ 251 (274)
.|..+++.+++.+|+++ +++++|||+.||++|++.+|+.+++.+...... . + +++. .+ -+.+.+.|+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~ 269 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKL 269 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHH
Confidence 66779999999999999 999999999999999999999988776554422 2 2 3544 23 44667777776
Q ss_pred Hhh
Q 024023 252 WEG 254 (274)
Q Consensus 252 ~~~ 254 (274)
++.
T Consensus 270 ~~~ 272 (273)
T PRK00192 270 LSK 272 (273)
T ss_pred Hhh
Confidence 654
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.9e-10 Score=97.76 Aligned_cols=79 Identities=24% Similarity=0.282 Sum_probs=68.4
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC------------CCCccc
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP------------VPPADH 236 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~------------~~~a~~ 236 (274)
.++..+++...|||++.++..++++++++|++++||||+. +||.-++++|++++++-+|-. ...|||
T Consensus 212 ~~~t~R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDy 291 (306)
T KOG2882|consen 212 KFATGRQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDY 291 (306)
T ss_pred HHHhcCCCeecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCch
Confidence 5556677899999999999999999999999999999999 799999999999999877664 234888
Q ss_pred cccCHhHHHHHH
Q 024023 237 ALNSIHNIKEAI 248 (274)
Q Consensus 237 ~~~~l~~l~~~l 248 (274)
.++++.++.+.+
T Consensus 292 y~~~l~d~~~~~ 303 (306)
T KOG2882|consen 292 YADSLGDLLPLL 303 (306)
T ss_pred HHhhHHHHhhhc
Confidence 888888887643
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.9e-10 Score=105.41 Aligned_cols=96 Identities=20% Similarity=0.265 Sum_probs=74.6
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
.++..|++.+.++.+ |.+++++|++++..++..++.+|+ ||.++++++.... +
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~---------------------k 125 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNL---------------------K 125 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCcccc---------------------C
Confidence 456779999999888 488999999999999999999988 8999999876543 1
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
++||++. +.+.++. ++++++||+.+|+++++.+| +.+.++.+.
T Consensus 126 g~~K~~~---l~~~l~~--~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 126 GAAKAAA---LVEAFGE--RGFDYAGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred CchHHHH---HHHHhCc--cCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence 2344443 3355552 55899999999999999999 556676554
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.21 E-value=8.5e-11 Score=109.45 Aligned_cols=89 Identities=25% Similarity=0.273 Sum_probs=72.8
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCCh------------HHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccccc
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQ------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 171 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~------------~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
++||+.+.|+.| |++++|+||.+. ..+..+++.+|+. |+.+++.++...
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~-------------- 261 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFY-------------- 261 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCC--------------
Confidence 467888888777 689999999766 4577788888886 887777765544
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhC----CCCCeEEEEcCChhcHHHHHHcCC
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDSARNIASAKAAGL 220 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g----~~~~~~i~VGDs~~Di~~a~~~G~ 220 (274)
+||++.++..++++++ +++++++||||+..|+.+++++|-
T Consensus 262 ---------RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 262 ---------RKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred ---------CCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 4999999999999995 899999999999988877666664
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.20 E-value=9.3e-10 Score=86.72 Aligned_cols=196 Identities=17% Similarity=0.199 Sum_probs=123.8
Q ss_pred CccEEEEecCCCccCCc---hhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH--H----HHHh---cCCC
Q 024023 20 NYECLLFDLDDTLYPLS---TGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA--G----LKAV---GYEF 87 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~----~~~~---~~~~ 87 (274)
+.|+++.|+.||+..-. ........+.+.+++.+..+-+. +.....+.....|.... . +..+ +...
T Consensus 3 m~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~--v~~~v~~v~~e~g~~~s~E~lva~~~~wiaed~K~ 80 (229)
T COG4229 3 MVKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSE--VKKIVDEVLSEFGIANSEEALVALLLEWIAEDSKD 80 (229)
T ss_pred chhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCCh--hhHHHHHHHHHhCccchHHHHHHHHHHHHhccccc
Confidence 56899999999999622 12233344455665655555432 23333455555554431 1 1011 0100
Q ss_pred -ChHHH-HHHHhccCCCC--CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHc---CCCCccceeEecccCCC
Q 024023 88 -DNDEF-HAFVHGKLPYE--KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINP 157 (274)
Q Consensus 88 -~~~~~-~~~~~~~~~~~--~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~ 157 (274)
+...+ ..+|...+... +..+||++.+.+++. |.+++|.|+++......+.... ++..+|+..+-. .++
T Consensus 81 t~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt-tiG- 158 (229)
T COG4229 81 TPLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT-TIG- 158 (229)
T ss_pred chHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec-ccc-
Confidence 11111 11233322222 457899999999877 5899999999988777666542 355666666554 233
Q ss_pred CCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCc---
Q 024023 158 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPA--- 234 (274)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a--- 234 (274)
.|....-+..++...|++|.+++|+.|++..+.+|+.+|+.+..+......+-+
T Consensus 159 -----------------------~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~ 215 (229)
T COG4229 159 -----------------------KKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQ 215 (229)
T ss_pred -----------------------ccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCc
Confidence 277778899999999999999999999999999999999999987655443222
Q ss_pred -cccccCHh
Q 024023 235 -DHALNSIH 242 (274)
Q Consensus 235 -~~~~~~l~ 242 (274)
-.+++||+
T Consensus 216 ~~~~~~sf~ 224 (229)
T COG4229 216 GFLVYKSFE 224 (229)
T ss_pred Cceeeechh
Confidence 34455555
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.1e-10 Score=101.01 Aligned_cols=71 Identities=14% Similarity=0.131 Sum_probs=56.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCHhH--HHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEI 251 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l~~--l~~~l~~~ 251 (274)
+..|..+++.+++.+|++++++++|||+.||++|.+.+|.++++-+.... +..|+++..+-++ +..+|+++
T Consensus 194 gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~ 267 (270)
T PRK10513 194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKY 267 (270)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHHH
Confidence 57889999999999999999999999999999999999998776554433 6678888765432 44445443
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.9e-11 Score=101.95 Aligned_cols=71 Identities=13% Similarity=0.115 Sum_probs=54.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCcc--ccccCHhH--HHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPAD--HALNSIHN--IKEAIPEI 251 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~--~~~~~l~~--l~~~l~~~ 251 (274)
+..|..+++.+++.+|++++++++|||+.||++|.+.+|.++++-+.... +..|+ +++.+-++ +..+|+++
T Consensus 188 gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~ 263 (266)
T PRK10976 188 GVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKL 263 (266)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHH
Confidence 57789999999999999999999999999999999999998776655443 44554 55544332 44555544
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.9e-11 Score=91.33 Aligned_cols=82 Identities=21% Similarity=0.305 Sum_probs=71.7
Q ss_pred HHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHH
Q 024023 112 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 191 (274)
Q Consensus 112 ~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 191 (274)
.++|..++.++.|+|+.....++...+.+|+..++ .+- +.|...+..+
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~----qG~----------------------------~dK~~a~~~L 91 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLY----QGI----------------------------SDKLAAFEEL 91 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceee----ech----------------------------HhHHHHHHHH
Confidence 36778889999999999999999999999996444 332 5668899999
Q ss_pred HHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 192 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 192 l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
++++++.++++.||||..+|+.....+|++++..
T Consensus 92 ~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~ 125 (170)
T COG1778 92 LKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA 125 (170)
T ss_pred HHHhCCCHHHhhhhcCccccHHHHHHcCCccccc
Confidence 9999999999999999999999999999987643
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.8e-10 Score=98.51 Aligned_cols=72 Identities=7% Similarity=0.039 Sum_probs=55.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccc--cccCHh--HHHHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADH--ALNSIH--NIKEAIPEIW 252 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~--~~~~l~--~l~~~l~~~~ 252 (274)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|.++++-+.... +..|++ ++.+-+ .+..+|++++
T Consensus 186 g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 186 GCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred CCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHh
Confidence 56789999999999999999999999999999999999988776554333 455554 444332 3666666665
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.7e-10 Score=107.49 Aligned_cols=61 Identities=15% Similarity=0.122 Sum_probs=51.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSI 241 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l 241 (274)
+..|..+++.+++.+|++++++++|||+.||++|.+.+|.++++-+.... +..|+++..+-
T Consensus 505 gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sN 566 (580)
T PLN02887 505 GTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSN 566 (580)
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCC
Confidence 57889999999999999999999999999999999999998776654443 66688877553
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.9e-09 Score=95.37 Aligned_cols=118 Identities=18% Similarity=0.170 Sum_probs=83.5
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHc-C-------CCCccceeEecccCCCCCCCCCCCCccc---
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL-G-------LEDCFEGIICFETINPRLQPADNTDGIE--- 169 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~-g-------l~~~fd~i~~~~~~~~~~~~~~~~~~~~--- 169 (274)
.+.+.|++.++|+.+ |.+++|+||++...+...++.+ | +.++||.|++...-. .=|.+...
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP-----~FF~~~~pf~~ 256 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKP-----GFFTEGRPFRQ 256 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCC-----cccCCCCceEE
Confidence 456789999999888 5889999999999999999996 7 889999998876321 11111111
Q ss_pred ---ccccCcccc----cCC-CCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHH-HcCCeEEEEC
Q 024023 170 ---NNSFSSNQR----ILC-KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIVG 226 (274)
Q Consensus 170 ---~~~~~~~~~----~~~-kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~-~~G~~~v~v~ 226 (274)
.++..+-.. ..| .=...-...+.+.+|+.++++++|||++ +|+..++ .+||.++++-
T Consensus 257 v~~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~ 323 (343)
T TIGR02244 257 VDVETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAII 323 (343)
T ss_pred EeCCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEc
Confidence 111111110 001 0012346677788899999999999999 8999998 8999999884
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.3e-10 Score=98.60 Aligned_cols=72 Identities=19% Similarity=0.229 Sum_probs=54.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccC--HhHHHHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNS--IHNIKEAIPEIW 252 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~--l~~l~~~l~~~~ 252 (274)
+..|..+++.+++.+|++++++++|||+.||++|.+.+|.++++-+.... +..++++..+ -+.+..+|+++.
T Consensus 187 g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~ 261 (264)
T COG0561 187 GVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLL 261 (264)
T ss_pred CCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHh
Confidence 57889999999999999999999999999999999999988876665333 4555544333 233445555443
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=7.9e-11 Score=94.67 Aligned_cols=86 Identities=20% Similarity=0.328 Sum_probs=67.6
Q ss_pred CCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChh-cHHHHHHcCCeEEEECCCCC--------CCC
Q 024023 163 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVP--------VPP 233 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~-Di~~a~~~G~~~v~v~~~~~--------~~~ 233 (274)
-++.++++-+-+ +..+.|||++..|+.+++.+|++|++++||||..+ |+-.|+++||..+.|.+|.- ...
T Consensus 163 ~fv~aLeyatg~-~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~ 241 (262)
T KOG3040|consen 163 PFVAALEYATGC-EATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVP 241 (262)
T ss_pred HHHHHhhhccCc-eEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCC
Confidence 445555532222 23566899999999999999999999999999996 79999999999999977663 345
Q ss_pred ccccccCHhHHHHHHH
Q 024023 234 ADHALNSIHNIKEAIP 249 (274)
Q Consensus 234 a~~~~~~l~~l~~~l~ 249 (274)
|+..+++|.+..+.|-
T Consensus 242 p~~~~d~f~~AVd~I~ 257 (262)
T KOG3040|consen 242 PDLTADNFADAVDLII 257 (262)
T ss_pred cchhhhhHHHHHHHHH
Confidence 7778888888777653
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.2e-10 Score=94.42 Aligned_cols=43 Identities=16% Similarity=0.068 Sum_probs=39.3
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEE
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v 223 (274)
+-.|+.+++.+++.+|++++++++|||+.||++|.+.+|.+++
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 3567789999999999999999999999999999999998765
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.4e-09 Score=90.88 Aligned_cols=50 Identities=26% Similarity=0.476 Sum_probs=46.5
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeE-EEEcCCh-hcHHHHHHcCCeEEEECCC
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKT-IFFDDSA-RNIASAKAAGLHTVIVGSS 228 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~-i~VGDs~-~Di~~a~~~G~~~v~v~~~ 228 (274)
..+||++..++.++++++++++++ ++|||+. +||.+|+++|+.++++.+|
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 468999999999999999998887 9999999 8999999999999999765
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.4e-09 Score=94.21 Aligned_cols=74 Identities=11% Similarity=0.049 Sum_probs=57.3
Q ss_pred CCCCCHHHHHHHHHHhCC---CCCeEEEEcCChhcHHHHHHcCCeEEEECCCC-------CCCCccccccCHh--HHHHH
Q 024023 180 LCKPSLEAIETAIRIANV---DPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-------PVPPADHALNSIH--NIKEA 247 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~---~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~-------~~~~a~~~~~~l~--~l~~~ 247 (274)
.+-.|..+++.+++.+|+ +++++++|||+.||++|.+.+|.++++-+... ....++|+....+ .+.+.
T Consensus 184 ~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 184 ASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 367889999999999999 99999999999999999999999888763331 1235667666655 56666
Q ss_pred HHHHHh
Q 024023 248 IPEIWE 253 (274)
Q Consensus 248 l~~~~~ 253 (274)
|+.+..
T Consensus 264 l~~~~~ 269 (271)
T PRK03669 264 LDHFFS 269 (271)
T ss_pred HHHHHh
Confidence 665543
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.9e-09 Score=88.02 Aligned_cols=95 Identities=18% Similarity=0.268 Sum_probs=61.3
Q ss_pred hhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCH
Q 024023 109 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 185 (274)
Q Consensus 109 ~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~ 185 (274)
|++.++++.+ +.+++|+|++....+..+++.+|+.. +.+++.+-.... .....+.+....+ + .|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~--~~v~~~~~~~~~--------~~~~~~~~~~~~~-~-~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD--DNVIGNELFDNG--------GGIFTGRITGSNC-G-GKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE--GGEEEEEEECTT--------CCEEEEEEEEEEE-S-HHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc--eEEEEEeeeecc--------cceeeeeECCCCC-C-cHH
Confidence 5666888665 79999999999999999999998874 234443321000 0000011111000 1 256
Q ss_pred HHHHHH---HHHhCCCCCeEEEEcCChhcHHHHH
Q 024023 186 EAIETA---IRIANVDPKKTIFFDDSARNIASAK 216 (274)
Q Consensus 186 ~~~~~~---l~~~g~~~~~~i~VGDs~~Di~~a~ 216 (274)
..++.+ ... +..+..+++||||.+|+.+++
T Consensus 160 ~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 666666 344 788999999999999999985
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.9e-09 Score=91.22 Aligned_cols=93 Identities=13% Similarity=0.201 Sum_probs=67.6
Q ss_pred hHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChH---HHHHHHHHcCCCCc-cceeEecccCCCCCCC
Q 024023 89 NDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQK---HAMEVLGRLGLEDC-FEGIICFETINPRLQP 161 (274)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~---~~~~~l~~~gl~~~-fd~i~~~~~~~~~~~~ 161 (274)
.+.+.++... ....++||+.++|+.+ |.+++++|+.+.. .+...|+.+|+... ++.++..++
T Consensus 105 ~~~w~~wv~~----~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~------- 173 (266)
T TIGR01533 105 PETWDKWVQA----AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD------- 173 (266)
T ss_pred HHHHHHHHHc----CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC-------
Confidence 4445555433 3457899999999877 6889999998744 45577888999764 456666542
Q ss_pred CCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHH
Q 024023 162 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASA 215 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a 215 (274)
.++|+..+..+.+++++ +++|||+.+|+..+
T Consensus 174 -------------------~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 174 -------------------KSSKESRRQKVQKDYEI----VLLFGDNLLDFDDF 204 (266)
T ss_pred -------------------CCCcHHHHHHHHhcCCE----EEEECCCHHHhhhh
Confidence 15667888888887776 89999999998653
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-09 Score=87.05 Aligned_cols=99 Identities=21% Similarity=0.371 Sum_probs=68.4
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeC-CChHHHHHHHHHcCCC----------CccceeEecccCCCCCCCCCCCCcc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTN-ADQKHAMEVLGRLGLE----------DCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~-~~~~~~~~~l~~~gl~----------~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
..+.++|++...|+.| |.+++++|. ..++.++..|+.+++. ++|+.. ++..
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~----eI~~----------- 106 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYL----EIYP----------- 106 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEE----EESS-----------
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchh----heec-----------
Confidence 5678999999998888 588999995 4567999999999998 555552 2221
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
-.|..-++.+.++.|+++++++||+|-..+++..+..|+.++.+..|-
T Consensus 107 -------------gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Gl 154 (169)
T PF12689_consen 107 -------------GSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGL 154 (169)
T ss_dssp -------------S-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS-
T ss_pred -------------CchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCC
Confidence 356778999999999999999999999999999989999999998864
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.8e-09 Score=85.53 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=70.5
Q ss_pred HHhCCCcEEEEeCCChH---------------HHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 115 LLSMPQRKIIFTNADQK---------------HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 115 L~~l~~~~~i~s~~~~~---------------~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
|...+++++|+|-++.. .+...|+.-+...-+..+++.-.--+ ..-..=.+..
T Consensus 87 l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w------------~~p~~y~~~g 154 (219)
T PTZ00445 87 LKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFW------------QEPSDYRPLG 154 (219)
T ss_pred HHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCccc------------CChhhhhhhc
Confidence 33446888888877664 45666665555544455554321110 0000001122
Q ss_pred CCCCCHHH--H--HHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 180 LCKPSLEA--I--ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 180 ~~kp~~~~--~--~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
..||.|+. + +.+++++|+.|++++||+|+..++++|++.|+.++.+..+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~e 208 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGNE 208 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCChH
Confidence 34999999 8 99999999999999999999999999999999999886543
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.92 E-value=1e-09 Score=93.53 Aligned_cols=96 Identities=20% Similarity=0.177 Sum_probs=68.7
Q ss_pred ChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcccee--EecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 108 DPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGI--ICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 108 ~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++++.++++.+ +.++ |+||.+.......+..+|...+|..+ .+.+... .+|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~-----------------------~gK 195 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIY-----------------------SGK 195 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEec-----------------------CCC
Confidence 46666666654 2444 66777666655455555555555433 3333222 369
Q ss_pred CCHHHHHHHHHHhCCC-CCeEEEEcCC-hhcHHHHHHcCCeEEEECC
Q 024023 183 PSLEAIETAIRIANVD-PKKTIFFDDS-ARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~-~~~~i~VGDs-~~Di~~a~~~G~~~v~v~~ 227 (274)
|+|+.+..+++++|.. ++++++|||+ .+|+.+|+++|+.++++.+
T Consensus 196 P~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 196 PYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred CCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 9999999999999975 5789999999 5999999999999998753
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.6e-08 Score=78.00 Aligned_cols=149 Identities=13% Similarity=0.090 Sum_probs=84.8
Q ss_pred CChHHHHHHHhccCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHcCCCCccce-eEecccCCCCCCCC
Q 024023 87 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEG-IICFETINPRLQPA 162 (274)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~---~~~~i~s~~~~~~~~~~l~~~gl~~~fd~-i~~~~~~~~~~~~~ 162 (274)
.+.++..+.+. ..+.+.|+.+++.++++ .+++|+|++....++.+++.++-.+-.+. -+.+++...
T Consensus 59 ~s~~Eile~ll-----k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~i----- 128 (220)
T COG4359 59 SSLEEILEFLL-----KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYI----- 128 (220)
T ss_pred CCHHHHHHHHH-----hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceE-----
Confidence 34456666552 45678899999988874 89999999999999999998763222222 122222111
Q ss_pred CCCCcccccc-cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEE---EECCCCCCCCccccc
Q 024023 163 DNTDGIENNS-FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV---IVGSSVPVPPADHAL 238 (274)
Q Consensus 163 ~~~~~~~~~~-~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v---~v~~~~~~~~a~~~~ 238 (274)
+.++.++.- ....+..+.| +.. ++.+.-.++.++|.|||.+|+.+|+....-++ +++.-.++...-.-+
T Consensus 129 -h~dg~h~i~~~~ds~fG~dK--~~v----I~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~~L~nyc~eqn~~f~~f 201 (220)
T COG4359 129 -HIDGQHSIKYTDDSQFGHDK--SSV----IHELSEPNESIFYCGDSVSDLSAAKLSDLLFAKDDLLNYCREQNLNFLEF 201 (220)
T ss_pred -cCCCceeeecCCccccCCCc--chh----HHHhhcCCceEEEecCCcccccHhhhhhhHhhHHHHHHHHHHcCCCCccc
Confidence 122222111 1112222234 333 44455566779999999999999998886544 122222233333334
Q ss_pred cCHhHHHHHHHHHH
Q 024023 239 NSIHNIKEAIPEIW 252 (274)
Q Consensus 239 ~~l~~l~~~l~~~~ 252 (274)
+++.++..-+++..
T Consensus 202 e~F~eIlk~iekvl 215 (220)
T COG4359 202 ETFYEILKEIEKVL 215 (220)
T ss_pred ccHHHHHHHHHHHH
Confidence 45555544444443
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.3e-07 Score=80.85 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=43.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+.+|+.+++.+++.+|++++++++|||+.||++|++.++..++.+.+..
T Consensus 165 ~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 165 GSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred CCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 5899999999999999999999999999999999998666666676554
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.9e-09 Score=91.32 Aligned_cols=60 Identities=18% Similarity=0.182 Sum_probs=48.8
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNS 240 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~ 240 (274)
+..|..+++.+++.+|++++++++|||+.||++|++.+|+.+++.+.... +..+++++.+
T Consensus 186 ~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~ 246 (256)
T TIGR00099 186 GVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDS 246 (256)
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecC
Confidence 57789999999999999999999999999999999999998776533222 4456666554
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.84 E-value=8.3e-09 Score=87.88 Aligned_cols=86 Identities=14% Similarity=0.088 Sum_probs=67.9
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHH--HHHHHcCCCC-ccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAM--EVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~--~~l~~~gl~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
++||+.++|+.| |.+++++||+++.... ..++.+|+.. +|+.|+++.+..
T Consensus 25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~------------------------ 80 (242)
T TIGR01459 25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA------------------------ 80 (242)
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH------------------------
Confidence 456777777666 5889999998877655 7889999997 899999987542
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGL 220 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~ 220 (274)
.+.+..++++++..++++++|||+..|+......|.
T Consensus 81 ----~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 81 ----VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred ----HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 236777778888999999999999999887765554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.84 E-value=2e-08 Score=80.00 Aligned_cols=76 Identities=18% Similarity=0.281 Sum_probs=56.4
Q ss_pred cEEEEeCCC-------hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHH
Q 024023 121 RKIIFTNAD-------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 193 (274)
Q Consensus 121 ~~~i~s~~~-------~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~ 193 (274)
+++|+||+. ...++.+-+.+|+. .+.... .|| ..+..+++
T Consensus 79 ~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h~~---------------------------kKP--~~~~~i~~ 125 (168)
T PF09419_consen 79 RVLIVSNSAGSSDDPDGERAEALEKALGIP----VLRHRA---------------------------KKP--GCFREILK 125 (168)
T ss_pred eEEEEECCCCcccCccHHHHHHHHHhhCCc----EEEeCC---------------------------CCC--ccHHHHHH
Confidence 699999973 55666666777753 111111 266 56667777
Q ss_pred HhCC-----CCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCC
Q 024023 194 IANV-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 194 ~~g~-----~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~ 229 (274)
.++. .|+++++|||.. +|+-+|...|+.++++..|-
T Consensus 126 ~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 126 YFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred HHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 7654 499999999999 99999999999999997763
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.4e-08 Score=83.75 Aligned_cols=46 Identities=11% Similarity=-0.017 Sum_probs=41.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
+++|+.+++.+++++|++++++++|||+.||++|++.+|..+++-+
T Consensus 157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~n 202 (236)
T TIGR02471 157 RASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGN 202 (236)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcC
Confidence 5899999999999999999999999999999999999997776443
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.6e-08 Score=80.41 Aligned_cols=90 Identities=20% Similarity=0.280 Sum_probs=58.0
Q ss_pred hhHHHHHHhC---CCcEEEEeCCC---h-----------HHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccccc
Q 024023 109 PVLRNLLLSM---PQRKIIFTNAD---Q-----------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 171 (274)
Q Consensus 109 ~~~~~~L~~l---~~~~~i~s~~~---~-----------~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
|++.+.|+.+ |+.++|+||.. . ..+..+++.+++. + .++.+.....
T Consensus 32 ~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~-~~~~a~~~d~-------------- 94 (159)
T PF08645_consen 32 PGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--I-QVYAAPHKDP-------------- 94 (159)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---E-EEEECGCSST--------------
T ss_pred hhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--e-EEEecCCCCC--------------
Confidence 3455555555 79999999852 1 2333455566665 3 3344332222
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhCC----CCCeEEEEcCC-----------hhcHHHHHHcCCeEE
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIANV----DPKKTIFFDDS-----------ARNIASAKAAGLHTV 223 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g~----~~~~~i~VGDs-----------~~Di~~a~~~G~~~v 223 (274)
.+||++.++..++++++. +.++++||||. .+|..-|.++|+.+.
T Consensus 95 --------~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 95 --------CRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp --------TSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred --------CCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 259999999999999874 88999999996 578999999999864
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.3e-08 Score=92.83 Aligned_cols=109 Identities=14% Similarity=0.216 Sum_probs=83.7
Q ss_pred CCCChhHHHHHHhC---CC-cEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 105 LKPDPVLRNLLLSM---PQ-RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~-~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
-.++||+.++++.| |. +++++|+.+...+...++.+|+..+|..+..
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p----------------------------- 411 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELLP----------------------------- 411 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCc-----------------------------
Confidence 35779999998888 57 8999999999999999999999877643211
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEA 247 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~ 247 (274)
.+| ..++++++...++++||||+.||+.+++++|+...+-..+.. ...+|+++ +++.+|.+.
T Consensus 412 -~~K----~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~ 477 (536)
T TIGR01512 412 -EDK----LEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQA 477 (536)
T ss_pred -HHH----HHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHH
Confidence 223 345556666668999999999999999999975554322222 45788888 899999874
|
. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.2e-07 Score=84.64 Aligned_cols=100 Identities=12% Similarity=0.142 Sum_probs=69.2
Q ss_pred CChhHHHHHHhCCCcEEEEeCCChHHHHHHHHH-cCCCCccceeEecc-cCCCCCCCCCCCCcccccccCccc-ccCCCC
Q 024023 107 PDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFE-TINPRLQPADNTDGIENNSFSSNQ-RILCKP 183 (274)
Q Consensus 107 ~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~-~gl~~~fd~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~kp 183 (274)
+.+...+.++..+.. +|+|.+.+..++.+++. +|+ |.+++++ ++. -++ ..+|.+.+. .|.|..
T Consensus 111 l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGi----d~VIgTeLev~--------~~G-~~TG~i~g~~~c~Ge~ 176 (497)
T PLN02177 111 VHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGA----DKVLGTELEVS--------KSG-RATGFMKKPGVLVGDH 176 (497)
T ss_pred cCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCC----CEEEecccEEC--------cCC-EEeeeecCCCCCccHH
Confidence 567788888887754 99999999999999976 676 5666665 110 011 255555554 466665
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEE
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 224 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~ 224 (274)
|...++ +.+|.+... ++.|||.+|..+...++-..+.
T Consensus 177 Kv~rl~---~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V 213 (497)
T PLN02177 177 KRDAVL---KEFGDALPD-LGLGDRETDHDFMSICKEGYMV 213 (497)
T ss_pred HHHHHH---HHhCCCCce-EEEECCccHHHHHHhCCccEEe
Confidence 555554 455654444 8999999999999999966543
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.65 E-value=7.6e-07 Score=76.40 Aligned_cols=48 Identities=17% Similarity=0.170 Sum_probs=43.4
Q ss_pred CCCCHHHHHHHHHHhCCC--CCeEEEEcCChhcHHHHHHcCCeEEEECCC
Q 024023 181 CKPSLEAIETAIRIANVD--PKKTIFFDDSARNIASAKAAGLHTVIVGSS 228 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~--~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~ 228 (274)
+..|..+++.+++.+|++ .+++++|||+.||+.|.+.+|.++++-+..
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~ 223 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPN 223 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCC
Confidence 477888999999999999 999999999999999999999888876654
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.3e-08 Score=92.67 Aligned_cols=121 Identities=13% Similarity=0.229 Sum_probs=86.6
Q ss_pred CCCChhHHHHHHhC---C-CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 105 LKPDPVLRNLLLSM---P-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~-~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
-.++||+.++++.| | .+++++|+.+...+...++.+|+..+|..+..
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~p----------------------------- 433 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELLP----------------------------- 433 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCCH-----------------------------
Confidence 45789999998888 6 78999999999999999999999877754311
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcccccc--CHhHHHHHHHHHHhhcc
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAIPEIWEGEG 256 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~--~l~~l~~~l~~~~~~~~ 256 (274)
++|+ .++++++..+.+++||||+.||+++++++|+.+.+- ++.. ...+|+++. ++..+.+.+ ++.....
T Consensus 434 -~~K~----~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i-~~~r~~~ 506 (556)
T TIGR01525 434 -EDKL----AIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAI-DLSRKTR 506 (556)
T ss_pred -HHHH----HHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHH-HHHHHHH
Confidence 2223 344555556789999999999999999999665543 3222 456888887 677777753 3333333
Q ss_pred cchhh
Q 024023 257 EQLEQ 261 (274)
Q Consensus 257 ~~~~~ 261 (274)
..+.+
T Consensus 507 ~~i~~ 511 (556)
T TIGR01525 507 RIIKQ 511 (556)
T ss_pred HHHHH
Confidence 33333
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.8e-08 Score=80.44 Aligned_cols=115 Identities=16% Similarity=0.139 Sum_probs=89.1
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCC-ccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
+..-||+.++|+.|. +.++|.|++....+..+++.++... +|+.+++.++....
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~----------------------- 97 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFT----------------------- 97 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEe-----------------------
Confidence 456799999999994 7899999999999999999999875 89999998865532
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHH
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
+|+ +.+.++.+|.+++++++|||++.|+.++.++|+.+...... ..|. .|.+|.++|+.+.
T Consensus 98 ~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~----~~D~---~L~~l~~~L~~l~ 158 (162)
T TIGR02251 98 NGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGD----PNDT---ELLNLIPFLEGLR 158 (162)
T ss_pred CCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCC----CCHH---HHHHHHHHHHHHh
Confidence 444 56778889999999999999999999999999886644321 1111 2555666665543
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.9e-07 Score=68.88 Aligned_cols=115 Identities=15% Similarity=0.144 Sum_probs=92.2
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
-.+++.+.+.++.|. .+++|.|+.....+...++-.|+. .+.++..
T Consensus 29 Gklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~--~~rv~a~------------------------------ 76 (152)
T COG4087 29 GKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIP--VERVFAG------------------------------ 76 (152)
T ss_pred cEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCc--eeeeecc------------------------------
Confidence 456788888888775 889999999999999999988875 4455543
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHHHHHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEI 251 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l~~~l~~~ 251 (274)
.+++....+++.++-+.+.+++|||+.||+.+.+++.++.+-+..... ...+|+++.++.++.+++...
T Consensus 77 a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 77 ADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 235677888888888889999999999999999999998877764332 457999999999999886543
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.7e-08 Score=80.23 Aligned_cols=165 Identities=15% Similarity=0.210 Sum_probs=90.0
Q ss_pred EEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCC----cchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhcc
Q 024023 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHID----ESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGK 99 (274)
Q Consensus 24 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (274)
|.+|+||||.|....+...+ .+.++.. ...... ......+|. ..+...+.+.+.+...
T Consensus 5 I~iDiDgVLad~~~~~~~~~--------n~~~~~~~~~~~~~~~~--~~~~~~~g~--------~~~e~~~~~~~~~~~~ 66 (191)
T PF06941_consen 5 IAIDIDGVLADFNSAFIEWF--------NEEFGKNPELTPEDITG--YWDWEKWGI--------TEPEFYEKLWRFYEEP 66 (191)
T ss_dssp EEEESBTTTB-HHHHHHHHH--------HHHTTTS----GGGGTS--SSHHHHHHH--------HSTTHHHHHHHHHTST
T ss_pred EEEECCCCCcccHHHHHHHH--------HHHcCCCCCCCHHHhhh--hhHHHHhCC--------CCHHHHHHHHHHHhCh
Confidence 89999999999555444433 3444444 111110 011111111 1112234455555555
Q ss_pred CCCCCCCCChhHHHHHHhCC---CcEEEEeCCChH-------HHHHHHHHc-CCCCccceeEecccCCCCCCCCCCCCcc
Q 024023 100 LPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQK-------HAMEVLGRL-GLEDCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 100 ~~~~~~~~~~~~~~~L~~l~---~~~~i~s~~~~~-------~~~~~l~~~-gl~~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
..+..++|+||+.+.|+.|. ...+++|+.+.. .....+++. |... ++.++.+.+
T Consensus 67 ~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~-~~~~~~~~~-------------- 131 (191)
T PF06941_consen 67 GFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIP-YDNLIFTGD-------------- 131 (191)
T ss_dssp TTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHH-HCCEEEESS--------------
T ss_pred hhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCc-hheEEEecC--------------
Confidence 55678999999999999983 457777765432 334445443 3211 233333211
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCC-ccccccCHhHHHHH
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP-ADHALNSIHNIKEA 247 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~-a~~~~~~l~~l~~~ 247 (274)
|. .++. + ++|+|++..+..+.+.|++.+++..+.++.. .-..+.+..++.+.
T Consensus 132 -------------K~----------~v~~--D--vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~Rv~~W~ei~~~ 184 (191)
T PF06941_consen 132 -------------KT----------LVGG--D--VLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPRVNNWEEIEDL 184 (191)
T ss_dssp -------------GG----------GC----S--EEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEEE-STTSHHHH
T ss_pred -------------CC----------eEec--c--EEecCChHHHHhccCCCceEEEEcCCCCCCCCCCccCCCHHHHHHH
Confidence 31 1122 2 8999999999999999999999988877443 47889999998876
Q ss_pred H
Q 024023 248 I 248 (274)
Q Consensus 248 l 248 (274)
+
T Consensus 185 i 185 (191)
T PF06941_consen 185 I 185 (191)
T ss_dssp H
T ss_pred H
Confidence 5
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.4e-07 Score=78.66 Aligned_cols=103 Identities=18% Similarity=0.208 Sum_probs=68.7
Q ss_pred hhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC-CCCCcccccccCccc----c--
Q 024023 109 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA-DNTDGIENNSFSSNQ----R-- 178 (274)
Q Consensus 109 ~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~-- 178 (274)
|++.++|+.| |.+++|+|++.+..+...++.+|+..+|+.++++.+....| |+ +..|......+.+.+ .
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~k-p~~e~~d~~~~~~~~~~~f~~d~~~ 227 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEY-STMSTEDRQYRYVFTKTPFYLNTTD 227 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCC-CCccccccccceEEecCCeEEeCCC
Confidence 4555555555 68899999999999999999999999999999998876653 22 222222211111111 1
Q ss_pred cCCCC-CHHHHHHHHHHhCCCC-CeEEEEcCCh-hcH
Q 024023 179 ILCKP-SLEAIETAIRIANVDP-KKTIFFDDSA-RNI 212 (274)
Q Consensus 179 ~~~kp-~~~~~~~~l~~~g~~~-~~~i~VGDs~-~Di 212 (274)
...-| +|..+...|++.|+.. +.+-.|+|=. ||+
T Consensus 228 ~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~~Nn~ 264 (301)
T TIGR01684 228 GKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLADNNF 264 (301)
T ss_pred CCcCCCCCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 11223 3678888999999976 4455788877 554
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.6e-06 Score=73.48 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=36.3
Q ss_pred CCCHHHHHHHHHHhCCC--CCeEEEEcCChhcHHHHHHcCCeEEE
Q 024023 182 KPSLEAIETAIRIANVD--PKKTIFFDDSARNIASAKAAGLHTVI 224 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~--~~~~i~VGDs~~Di~~a~~~G~~~v~ 224 (274)
.+|..+++.+.+.|... +-.++.+|||+||+.|...+.+.++.
T Consensus 207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 56788888888888764 45899999999999999999988774
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.52 E-value=5e-07 Score=90.40 Aligned_cols=136 Identities=17% Similarity=0.229 Sum_probs=98.8
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |.+++++|+.+...+....+.+|+...++.++++++.... +.-.-.....+......
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~-------~~~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAM-------DDQQLSQIVPKVAVFAR 600 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhC-------CHHHHHHHhhcCeEEEE
Confidence 5578888888777 6899999999999999999999998777777777654321 00000001112223346
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 248 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l 248 (274)
..|+-...+.+.+......+.++||+.||..+++.|+++..+-..+.. +..+|+++ +++..+...+
T Consensus 601 ~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 601 ASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAI 670 (884)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHH
Confidence 777777888887777778999999999999999999987665323333 56789999 6688888754
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=7.3e-07 Score=84.80 Aligned_cols=46 Identities=11% Similarity=0.068 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEE--cCChhcHHHHHHcCCeEEEEC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFF--DDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~V--GDs~~Di~~a~~~G~~~v~v~ 226 (274)
+-.|..+++.+++.+|++.++++.| ||+.||++|.+.+|.++++-.
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~ 658 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQR 658 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcC
Confidence 4677899999999999999999988 999999999999999887643
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.46 E-value=1e-06 Score=83.89 Aligned_cols=121 Identities=16% Similarity=0.228 Sum_probs=84.2
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
-.++|++.++++.| |.+++++|+.+...+...++.+|+. +| . + .. .
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~----~-~-~~------------------------p 452 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VR----A-E-VL------------------------P 452 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EE----c-c-CC------------------------h
Confidence 35678988888777 5889999999999999999999995 22 1 1 10 1
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHHHHHHhhccc
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIPEIWEGEGE 257 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l~~~~~~~~~ 257 (274)
++|.+.+ +++..++++++||||+.||+.+++++|++..+- .+.. ...+|+++ +++..|.+.+ ++......
T Consensus 453 ~~K~~~v----~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i-~lsr~~~~ 526 (562)
T TIGR01511 453 DDKAALI----KELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAI-DLSRKTLR 526 (562)
T ss_pred HHHHHHH----HHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHH-HHHHHHHH
Confidence 3334444 444446789999999999999999999875443 3332 45688888 4888887743 34444444
Q ss_pred chhhh
Q 024023 258 QLEQV 262 (274)
Q Consensus 258 ~~~~~ 262 (274)
.+.|+
T Consensus 527 ~i~qn 531 (562)
T TIGR01511 527 RIKQN 531 (562)
T ss_pred HHHHH
Confidence 44443
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.36 E-value=6.8e-07 Score=75.28 Aligned_cols=43 Identities=12% Similarity=0.145 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHHHhCC--CCCeEEEEcCChhcHHHHHHcCCeEE
Q 024023 181 CKPSLEAIETAIRIANV--DPKKTIFFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~--~~~~~i~VGDs~~Di~~a~~~G~~~v 223 (274)
+-.|+.+++.+++.+++ .++++++|||+.||+.|.+.+|++++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 45668889999999876 66789999999999999999998765
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.8e-06 Score=73.21 Aligned_cols=104 Identities=19% Similarity=0.186 Sum_probs=65.7
Q ss_pred hhHHHHHH---hCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccc----cc--
Q 024023 109 PVLRNLLL---SMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ----RI-- 179 (274)
Q Consensus 109 ~~~~~~L~---~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-- 179 (274)
|++.++|+ ..|.+++|+|++++..+...++.+|+..+|+.++++++......-....|......+.+.+ ..
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~ 230 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDV 230 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCcc
Confidence 34444444 4468999999999999999999999999999999988654321101111211111111111 11
Q ss_pred CCCC-CHHHHHHHHHHhCCCC-CeEEEEcCCh-hcH
Q 024023 180 LCKP-SLEAIETAIRIANVDP-KKTIFFDDSA-RNI 212 (274)
Q Consensus 180 ~~kp-~~~~~~~~l~~~g~~~-~~~i~VGDs~-~Di 212 (274)
..-| +|..+...|++.|+.. +.+-.|+|=. ||+
T Consensus 231 ~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 231 KNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred cCCCCCCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 1223 3678889999999976 4455888877 564
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.3e-05 Score=73.44 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHHHHh---CCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 181 CKPSLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~---g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+-.|..+++.+++++ |+++++++++||+.||++|.+.+|...+.+.+..
T Consensus 173 g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~ 224 (413)
T PLN02382 173 GAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQ 224 (413)
T ss_pred CCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCc
Confidence 467789999999999 9999999999999999999999995344454444
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.27 E-value=2e-06 Score=73.51 Aligned_cols=47 Identities=19% Similarity=0.314 Sum_probs=37.5
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
-.|..+++.+++++++++++++++|||.||+.|. ..+...+.|.+..
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ 210 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence 5678999999999999999999999999999999 6666778787644
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=5.5e-06 Score=82.60 Aligned_cols=109 Identities=11% Similarity=0.169 Sum_probs=81.6
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| +++++++|+.....+..+++.+|+..+|..+ .
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~--------------------------------~ 697 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV--------------------------------L 697 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC--------------------------------C
Confidence 5578888887777 5889999999999999999999997544321 1
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHHHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l~~~l~ 249 (274)
|+....++++++.+++++++|||+.||+.+++.+|++.++- ++.. .+...+..+++..|.+.+.
T Consensus 698 --p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 698 --PDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred --HHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 22345677777778899999999999999999999976554 3332 2334455578888887653
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.7e-05 Score=65.25 Aligned_cols=106 Identities=10% Similarity=0.050 Sum_probs=64.8
Q ss_pred hHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHH---HHHHHHHcCCCCccceeEecccCCCCCCCC
Q 024023 89 NDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKH---AMEVLGRLGLEDCFEGIICFETINPRLQPA 162 (274)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~---~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~ 162 (274)
...+.++... ...++.|++.++++.+ |++++++|+.+... +..-|...|+..+ +.++-......
T Consensus 107 ~~~~~~wv~~----~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~----- 176 (229)
T TIGR01675 107 PTAFWLWLGK----GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDS----- 176 (229)
T ss_pred HHHHHHHHHc----CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCC-----
Confidence 4445555443 4458889999988877 68999999998766 6677788888765 66555431111
Q ss_pred CCCCcccccccCcccccCCCC----CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 163 DNTDGIENNSFSSNQRILCKP----SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~kp----~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
+++ |.+...++. +-|... +..|||..+|+.. ..+|..+.-.+
T Consensus 177 ------------------~~~~~~yKs~~R~~l~-~~GYrI--v~~iGDq~sDl~G-~~~~~RtFKLP 222 (229)
T TIGR01675 177 ------------------NKTVVTYKSEVRKSLM-EEGYRI--WGNIGDQWSDLLG-SPPGRRTFKLP 222 (229)
T ss_pred ------------------CchHhHHHHHHHHHHH-hCCceE--EEEECCChHHhcC-CCccCceeeCC
Confidence 122 222332322 223322 5688999999954 34555554443
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.20 E-value=5.8e-06 Score=70.49 Aligned_cols=71 Identities=13% Similarity=0.131 Sum_probs=62.2
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc-------CCeEEEECCCCCCCCccccccCHhHHHHHHHHHH
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA-------GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~-------G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
..|+.+++.++++++..++++++|||+.||+.|++.+ |..++.+.++.....|++++++.+++..+|..+.
T Consensus 166 ~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 166 VNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 3457899999999999999999999999999999998 6677777767667889999999999999887764
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.8e-05 Score=70.65 Aligned_cols=118 Identities=20% Similarity=0.219 Sum_probs=66.4
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHc---------CCCCccceeEecccCCCCCCCCCCCCccc--
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---------GLEDCFEGIICFETINPRLQPADNTDGIE-- 169 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~---------gl~~~fd~i~~~~~~~~~~~~~~~~~~~~-- 169 (274)
.+...|.+..+|+.+ |.++.++||++...+...+..+ .+.++||.|++.-.- |.=|.+...
T Consensus 181 Yi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~K-----P~FF~~~~pfr 255 (448)
T PF05761_consen 181 YIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARK-----PGFFTEGRPFR 255 (448)
T ss_dssp CEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--C-----CHHHCT---EE
T ss_pred HccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCC-----CcccCCCCceE
Confidence 445567888888777 5789999999999999888764 356899999875421 110000000
Q ss_pred ----ccccCcccc---cCCCC---CHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHc-CCeEEEEC
Q 024023 170 ----NNSFSSNQR---ILCKP---SLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAA-GLHTVIVG 226 (274)
Q Consensus 170 ----~~~~~~~~~---~~~kp---~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~-G~~~v~v~ 226 (274)
.++...... ...++ ...-...+.+-+|...+++++|||+. .||...+.. ||.+++|-
T Consensus 256 ~vd~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 256 EVDTETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAII 324 (448)
T ss_dssp EEETTTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-
T ss_pred EEECCCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEe
Confidence 111111100 00011 12345566677788889999999999 798777765 99999883
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.4e-05 Score=65.79 Aligned_cols=42 Identities=14% Similarity=0.027 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcC----ChhcHHHHHHcCCeEEEECC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGD----s~~Di~~a~~~G~~~v~v~~ 227 (274)
+..|..+++.++ +++++++||| +.||++|.+..|+.++-|..
T Consensus 187 gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 187 GWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 567788888877 8999999999 79999999888888776643
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.10 E-value=2e-05 Score=79.26 Aligned_cols=135 Identities=12% Similarity=0.138 Sum_probs=89.0
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCc----cceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC----FEGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~----fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
++.|++.+.++.| |.+++++|+.....+....+.+|+... .+..+++.+.... +.-..........
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~-------~~~~~~~~~~~~~ 609 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEM-------GPAKQRAACRSAV 609 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhC-------CHHHHHHhhhcCe
Confidence 3567888887776 699999999999999999999998531 1123333221110 0000000011112
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccC--HhHHHHHH
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAI 248 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~--l~~l~~~l 248 (274)
..+...|+-...+.+.++...+.+.++||+.||+.|.+.++++.++- .+.. +..+|+++.+ +..+.+.+
T Consensus 610 v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 610 LFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHH
Confidence 22345566667777777766788889999999999999999976654 4433 5579999987 88877764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.05 E-value=8.5e-06 Score=68.74 Aligned_cols=99 Identities=11% Similarity=0.041 Sum_probs=57.1
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCCh---HHHHHHHHHcCCCCccceeE-ecccCCCCCCCCCCCCcccccccCcccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQ---KHAMEVLGRLGLEDCFEGII-CFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~---~~~~~~l~~~gl~~~fd~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
+++|++.++++.+ |..++++|+.+. .....-|.+.|...+ +.++ -.+..... ..
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-~~l~lr~~~~~~~-----------------~~- 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-DHLILRPDKDPSK-----------------KS- 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-SCGEEEEESSTSS--------------------
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-chhcccccccccc-----------------cc-
Confidence 7778888887776 799999999655 455566778887654 4444 33321110 00
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc---CCeEEEECC
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA---GLHTVIVGS 227 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~---G~~~v~v~~ 227 (274)
-..-|......+.++ |... ++.|||..+|+..++.. |...+..++
T Consensus 176 -~~~yK~~~r~~i~~~-Gy~I--i~~iGD~~~D~~~~~~~~~~~~r~f~lPN 223 (229)
T PF03767_consen 176 -AVEYKSERRKEIEKK-GYRI--IANIGDQLSDFSGAKTAGARAERWFKLPN 223 (229)
T ss_dssp -----SHHHHHHHHHT-TEEE--EEEEESSGGGCHCTHHHHHHHTTEEE-TT
T ss_pred -ccccchHHHHHHHHc-CCcE--EEEeCCCHHHhhcccccccccceEEEcCC
Confidence 001133444444444 4432 78999999999884433 345554444
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.1e-05 Score=60.46 Aligned_cols=83 Identities=16% Similarity=0.213 Sum_probs=58.6
Q ss_pred CCCCCChhHHHHHHhCCCcEEEEeC---CChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 103 EKLKPDPVLRNLLLSMPQRKIIFTN---ADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l~~~~~i~s~---~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
..+.++|.+++++++++...+|+|. ....-+...|+.+++..||+.++.-..
T Consensus 38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~ViePh------------------------- 92 (164)
T COG4996 38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVIEPH------------------------- 92 (164)
T ss_pred eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEecCC-------------------------
Confidence 4568899999999999766665554 455667778899999999988776331
Q ss_pred CCCCCHHHHHHHHHHh------CCCCCeEEEEcCChhcH
Q 024023 180 LCKPSLEAIETAIRIA------NVDPKKTIFFDDSARNI 212 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~------g~~~~~~i~VGDs~~Di 212 (274)
--|.-++.+++... -++|.+++|++|..--+
T Consensus 93 --P~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~ 129 (164)
T COG4996 93 --PYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHF 129 (164)
T ss_pred --ChhHHHHHHHHHHHHHhhccccCcceEEEEecccccH
Confidence 01123444555443 46899999999998443
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=5.8e-05 Score=62.67 Aligned_cols=93 Identities=19% Similarity=0.271 Sum_probs=63.3
Q ss_pred CCChHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHH----HHHHHHHcCCCCccce-eEecccCCC
Q 024023 86 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKH----AMEVLGRLGLEDCFEG-IICFETINP 157 (274)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~----~~~~l~~~gl~~~fd~-i~~~~~~~~ 157 (274)
.+.++.+.++... ....+.||+.+++++. |..++.+||.+.+. ...-|++.|+....+. ++...+
T Consensus 106 ~f~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~--- 178 (274)
T COG2503 106 GFTPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKD--- 178 (274)
T ss_pred CCCccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeC---
Confidence 3446666666654 4568999999999988 58899999987765 4456677788765443 333322
Q ss_pred CCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcH
Q 024023 158 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNI 212 (274)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di 212 (274)
.+++..-...+-+ ..+-++.|||+..|.
T Consensus 179 -----------------------~k~Ke~R~~~v~k----~~~iVm~vGDNl~DF 206 (274)
T COG2503 179 -----------------------KKSKEVRRQAVEK----DYKIVMLVGDNLDDF 206 (274)
T ss_pred -----------------------CCcHHHHHHHHhh----ccceeeEecCchhhh
Confidence 2566555555544 345589999999874
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00019 Score=56.94 Aligned_cols=101 Identities=13% Similarity=0.095 Sum_probs=56.8
Q ss_pred ChhHHHHHHhC---CCcEEEEeCCChHHHH---HHHHHc---CCCCccceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 108 DPVLRNLLLSM---PQRKIIFTNADQKHAM---EVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 108 ~~~~~~~L~~l---~~~~~i~s~~~~~~~~---~~l~~~---gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
.|++.++++.+ |.+++++|+.+..... ..++.+ |..-....+++++..... ......
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~--------------~~~~e~ 94 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFA--------------ALHREV 94 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchh--------------hhhccc
Confidence 35666666655 6889999999887763 666662 211112345555432110 000011
Q ss_pred cCCCC---CHHHHHHHHHHhCCCCCeE-EEEcCChhcHHHHHHcCCeE
Q 024023 179 ILCKP---SLEAIETAIRIANVDPKKT-IFFDDSARNIASAKAAGLHT 222 (274)
Q Consensus 179 ~~~kp---~~~~~~~~l~~~g~~~~~~-i~VGDs~~Di~~a~~~G~~~ 222 (274)
...+| |.+.+..+.+-+.-..-.. +.+||+.+|+.+-+++|+..
T Consensus 95 i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 95 ISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 11233 4556666665443222233 45899999999999999964
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0012 Score=56.52 Aligned_cols=118 Identities=22% Similarity=0.182 Sum_probs=68.9
Q ss_pred hhHHHHHHhCCCcEEEEeCCChHHHHHH---HHHcCCCCccceeEecccCCCCCCCCCCCCccc-ccccCccc-ccCCCC
Q 024023 109 PVLRNLLLSMPQRKIIFTNADQKHAMEV---LGRLGLEDCFEGIICFETINPRLQPADNTDGIE-NNSFSSNQ-RILCKP 183 (274)
Q Consensus 109 ~~~~~~L~~l~~~~~i~s~~~~~~~~~~---l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~kp 183 (274)
|.+.+-|+.-+.+++.+|..+..+.... |+++|++ |+.-...++.... -| ...+... ...+.++. .+.+-+
T Consensus 87 ~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~-~~-~~~~~~~~~~~~~~GIlft~~~~ 162 (252)
T PF11019_consen 87 PNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIIS-FP-VFDSALSRAPSFYDGILFTGGQD 162 (252)
T ss_pred HHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCccee-cc-cccCCCCCCceeecCeEEeCCCc
Confidence 4444445555788999999877655544 4556665 4332111110000 00 0000000 11122222 223467
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHH----HHcCCeEEEECCCCC
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASA----KAAGLHTVIVGSSVP 230 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a----~~~G~~~v~v~~~~~ 230 (274)
+++++..++.+.|..|+.+|||+|+...+... ++.|+.+.++.....
T Consensus 163 KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 163 KGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred cHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 78999999999999999999999999776544 447888888765443
|
The function is not known. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00016 Score=70.00 Aligned_cols=107 Identities=11% Similarity=0.070 Sum_probs=78.0
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |++++++|+.+..-+..+.+.+|+.++|. .
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A----------------------------------~ 486 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVA----------------------------------E 486 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEc----------------------------------C
Confidence 4457877776666 68999999999999999999999975332 2
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEA 247 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~ 247 (274)
-.|+-..++.+++.-....+.|+||+.||..+.+.+.++.++- +|.. +..+|.++ +++..+.+.
T Consensus 487 ~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~a 554 (673)
T PRK14010 487 CKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEV 554 (673)
T ss_pred CCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHH
Confidence 2355556666666655577999999999999999999987755 5553 45555554 345555543
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=97.78 E-value=1.7e-05 Score=67.00 Aligned_cols=63 Identities=21% Similarity=0.225 Sum_probs=51.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCHhH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN 243 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l~~ 243 (274)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|.++++-+.... +..|++++.+-.+
T Consensus 184 ~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 184 GVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp TSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTC
T ss_pred CCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCC
Confidence 46779999999999999999999999999999999999988664433332 5667777777666
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0002 Score=70.53 Aligned_cols=122 Identities=20% Similarity=0.265 Sum_probs=82.2
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |.+++++|+.+...+..+.+.+|+..+++ . .
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~-------~--------------------------~ 614 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG-------L--------------------------L 614 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC-------C--------------------------C
Confidence 5678888887777 68999999999999999999999963221 0 2
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHHHHHHhhcccc
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIPEIWEGEGEQ 258 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l~~~~~~~~~~ 258 (274)
| +-...++++++ .+.+++||||+.||..+++.++++.++. .+.. ...+|.++ +++..|.+.+ .+.......
T Consensus 615 p--~~K~~~v~~l~-~~~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i-~~sr~~~~~ 689 (741)
T PRK11033 615 P--EDKVKAVTELN-QHAPLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMI-ELSRATHAN 689 (741)
T ss_pred H--HHHHHHHHHHh-cCCCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHH-HHHHHHHHH
Confidence 2 12223444444 2368999999999999999999887654 3332 23455544 6777777533 444555555
Q ss_pred hhhhcch
Q 024023 259 LEQVIQP 265 (274)
Q Consensus 259 ~~~~~~~ 265 (274)
+.|++.=
T Consensus 690 I~~nl~~ 696 (741)
T PRK11033 690 IRQNITI 696 (741)
T ss_pred HHHHHHH
Confidence 5555443
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00065 Score=58.14 Aligned_cols=49 Identities=12% Similarity=0.049 Sum_probs=35.2
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChH---HHHHHHHHcCCCCccceeEec
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQK---HAMEVLGRLGLEDCFEGIICF 152 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~---~~~~~l~~~gl~~~fd~i~~~ 152 (274)
...++.|++.++++.+ |++++++|+.+.. ....-|++.|...+ +.++-.
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR 196 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILK 196 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeec
Confidence 4567888999988776 6899999998764 34456667787654 555554
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.73 E-value=9.4e-05 Score=74.74 Aligned_cols=151 Identities=12% Similarity=0.025 Sum_probs=96.8
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |++++++|+.+...+..+.+.+|+..--+.++++++.... ...+.............
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l-------~~~el~~~i~~~~Vfar 651 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRL-------VYEEMDPILPKLRVLAR 651 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhC-------CHHHHHHHhccCeEEEE
Confidence 4457777776666 6999999999999999999999986432345555543211 00000000011112234
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcccccc--CHhHHHHHHHHHHhhcccc
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAIPEIWEGEGEQ 258 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~--~l~~l~~~l~~~~~~~~~~ 258 (274)
-.|+-...+.+.+.-....+.|+||+.||..+.+.|.++.++-..+.. +..+|.++. +|..+...+ ......-..
T Consensus 652 ~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i-~~gR~~~~n 730 (941)
T TIGR01517 652 SSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAV-KWGRNVYDN 730 (941)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHH-HHHHHHHHH
Confidence 445555666666655556799999999999999999999775424443 567888887 788888876 444444445
Q ss_pred hhhhcc
Q 024023 259 LEQVIQ 264 (274)
Q Consensus 259 ~~~~~~ 264 (274)
+.+.++
T Consensus 731 i~k~i~ 736 (941)
T TIGR01517 731 IRKFLQ 736 (941)
T ss_pred HHHHHH
Confidence 544444
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0002 Score=69.23 Aligned_cols=107 Identities=13% Similarity=0.140 Sum_probs=73.1
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |.+++++|+.....+....+.+|+.+++ +.. .
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~----a~~----------------------------~ 493 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFI----AEA----------------------------T 493 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEE----cCC----------------------------C
Confidence 3457777777766 6899999999999999999999996433 211 2
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEA 247 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~ 247 (274)
|+-...+++.+.-....+.|+||+.||..+.+.++++.++- .+.. +..++.++ +++..+.+.
T Consensus 494 --PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~a 559 (675)
T TIGR01497 494 --PEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEV 559 (675)
T ss_pred --HHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHH
Confidence 33334444444434467999999999999999999987764 4443 34445543 334444443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00011 Score=73.84 Aligned_cols=131 Identities=16% Similarity=0.186 Sum_probs=87.2
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 183 (274)
+.|++.+.++.| |++++++|+.+..-+..+.+.+|+. -+.++++.+.... +.-+-............-
T Consensus 551 ~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l-------~~~el~~~~~~~~VfAr~ 621 (902)
T PRK10517 551 PKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETL-------SDDELANLAERTTLFARL 621 (902)
T ss_pred chhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhC-------CHHHHHHHHhhCcEEEEc
Confidence 346777776666 6999999999999999999999995 2456666544321 000000001111122345
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHH
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEA 247 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~ 247 (274)
.|+-..++.+.+.-....+.|+||+.||..+.+.|.++.++- ++.. +..+|.++ +++..+.+.
T Consensus 622 sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~a 688 (902)
T PRK10517 622 TPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEG 688 (902)
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHH
Confidence 566667777776656677999999999999999999997765 5543 56677777 456666554
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=97.68 E-value=1.1e-05 Score=63.92 Aligned_cols=89 Identities=24% Similarity=0.248 Sum_probs=60.5
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCC-CCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGL-EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl-~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
+.+.||+.++|+.+. +.++|.|.+....+..+++.+.- ..+|+.+++.++....
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~----------------------- 91 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFD----------------------- 91 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEE-----------------------
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccc-----------------------
Confidence 456799999999884 89999999999999999999987 4678998887754321
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 219 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G 219 (274)
+.. . ..-++.+|.+.+++++|+|++.-...-...+
T Consensus 92 ~~~--~-~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~ 126 (159)
T PF03031_consen 92 KGS--Y-IKDLSKLGRDLDNVVIVDDSPRKWALQPDNG 126 (159)
T ss_dssp TTE--E-E--GGGSSS-GGGEEEEES-GGGGTTSGGGE
T ss_pred ccc--c-ccchHHHhhccccEEEEeCCHHHeeccCCce
Confidence 100 0 1345555778899999999997553333333
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00011 Score=73.72 Aligned_cols=133 Identities=13% Similarity=0.150 Sum_probs=88.5
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |++++++|+.+..-+..+.+.+|+.. +.++++.+.... +.-+-............
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~-------~~~el~~~v~~~~VfAr 620 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAM-------DDAALAREVEERTVFAK 620 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhC-------CHHHHHHHhhhCCEEEE
Confidence 3457777777766 68999999999999999999999952 345555543211 00000000011112234
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 248 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l 248 (274)
-.|+-..++.+.+.-....+.|+||+.||..+.+.|.++.++- +|.. +..+|.++ ++|..+...+
T Consensus 621 ~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 621 LTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred eCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHH
Confidence 4566667777777666677999999999999999999997654 4443 66788877 5666666643
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00024 Score=61.41 Aligned_cols=73 Identities=19% Similarity=0.227 Sum_probs=61.3
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc----CCeEEEECCCCCCCCccccccCHhHHHHHHHHHHhhcc
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA----GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEG 256 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~----G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~~~~ 256 (274)
+..|..++..+++.+|+..+++++|||+.||+.|.+.+ |.. +.+..+ ...|.+.+++..++..+|..+.....
T Consensus 172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~-vavg~a--~~~A~~~l~~~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGIS-VKVGTG--ATQASWRLAGVPDVWSWLEMITTAQQ 248 (266)
T ss_pred CCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeE-EEECCC--CCcCeEeCCCHHHHHHHHHHHHHhhh
Confidence 46778999999999999999999999999999999988 544 555544 36688999999999999988886544
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00029 Score=68.21 Aligned_cols=108 Identities=11% Similarity=0.174 Sum_probs=77.8
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |++++++|+.+..-+..+.+.+|++++| + .
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~----A------------------------------~ 490 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFL----A------------------------------E 490 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEE----c------------------------------c
Confidence 3457888776666 6999999999999999999999996432 2 2
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcccccc--CHhHHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAI 248 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~--~l~~l~~~l 248 (274)
-.|+-...+.+++.-...-+.|+||+.||..+.+.++++.++- +|.. +..+|.++- ++..+.+.+
T Consensus 491 ~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av 559 (679)
T PRK01122 491 ATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVV 559 (679)
T ss_pred CCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 2344555666666555567999999999999999999997765 5554 445555542 455555543
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00018 Score=72.07 Aligned_cols=131 Identities=11% Similarity=0.163 Sum_probs=84.7
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 183 (274)
+.|++.+.++.| |++++++|+.+...+..+.+.+|+.. +.++++.+.... .+. +.........+...-
T Consensus 516 ~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~------~~~-el~~~~~~~~vfAr~ 586 (867)
T TIGR01524 516 PKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEEL------SDE-ELARELRKYHIFARL 586 (867)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhC------CHH-HHHHHhhhCeEEEEC
Confidence 457777776666 68999999999999999999999952 345554433210 000 000000111122334
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHH
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEA 247 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~ 247 (274)
.|+-..++.+.+.-....+.|+||+.||..+.+.|+++.++- .+.. +..+|.++ +++..+...
T Consensus 587 ~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~a 653 (867)
T TIGR01524 587 TPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEG 653 (867)
T ss_pred CHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHH
Confidence 555566666666555577999999999999999999997765 4443 56677776 455555554
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00017 Score=73.39 Aligned_cols=136 Identities=11% Similarity=0.038 Sum_probs=88.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCc----------cceeEecccCCCCCCCCCCCCcccccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC----------FEGIICFETINPRLQPADNTDGIENNS 172 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~----------fd~i~~~~~~~~~~~~~~~~~~~~~~~ 172 (274)
++.|++.+.++.| |++++++|+....-+..+.+.+|+..- -+.++++.+.... +..+-..
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l-------~~~~l~~ 718 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL-------SDEEVDD 718 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhc-------CHHHHHH
Confidence 4457777776666 699999999999999999999998531 1235555443211 0000000
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccC--HhHHHHHH
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAI 248 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~--l~~l~~~l 248 (274)
......+...-.|+-...+.+.+.-....+.++||+.||..+.+.++++.++-..+.. +..+|+++.+ |..+...+
T Consensus 719 ~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i 798 (1053)
T TIGR01523 719 LKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAI 798 (1053)
T ss_pred HhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHH
Confidence 0011112234456666666666655557799999999999999999999875434443 5678888854 77777654
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.59 E-value=6.9e-05 Score=61.83 Aligned_cols=43 Identities=19% Similarity=0.198 Sum_probs=40.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEE
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v 223 (274)
+.+|+.+++.++++++++++++++|||+.||+.|++.+|+..+
T Consensus 161 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 161 GVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 5889999999999999999999999999999999999998865
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0027 Score=52.54 Aligned_cols=150 Identities=13% Similarity=0.151 Sum_probs=78.8
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCC-Cc-------cceeEecccCC----CCCCCCCC-----
Q 024023 104 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DC-------FEGIICFETIN----PRLQPADN----- 164 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~-~~-------fd~i~~~~~~~----~~~~~~~~----- 164 (274)
..++.||+.++++.++ +.-+|+|.+-.++++.....+|+. +. +|.+-..++.. ....|-+.
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHH
Confidence 4688999999999996 467788888788888888887762 11 23211111000 00000000
Q ss_pred ----CCccc-------ccccCcccccC-CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc-C---CeEEEECCC
Q 024023 165 ----TDGIE-------NNSFSSNQRIL-CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA-G---LHTVIVGSS 228 (274)
Q Consensus 165 ----~~~~~-------~~~~~~~~~~~-~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~-G---~~~v~v~~~ 228 (274)
.|.+| .+-++.+.-.. +-.+...++..++--+.+.+ +++||||.+|+.|.+.+ | .-.++.++.
T Consensus 161 lfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 161 LFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFS-AVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcc-eeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 11111 11122222111 22233444445555555555 89999999999998875 2 333333444
Q ss_pred CCCCCccccc--cCHhHHHHHHHHHHhh
Q 024023 229 VPVPPADHAL--NSIHNIKEAIPEIWEG 254 (274)
Q Consensus 229 ~~~~~a~~~~--~~l~~l~~~l~~~~~~ 254 (274)
+....|+..+ .+...+.++|.-.+.+
T Consensus 240 Yal~eAdVAvisp~~~a~~pvielf~e~ 267 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIELFMER 267 (315)
T ss_pred ccccccceEEeccchhhhhHHHHHHHHH
Confidence 4455555544 3444455555544444
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00026 Score=68.71 Aligned_cols=107 Identities=15% Similarity=0.288 Sum_probs=76.2
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
.+.|+..+.++.| |.+++++|+.++..++.+.+.+|+++++..+.
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Aell-------------------------------- 584 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELL-------------------------------- 584 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCC--------------------------------
Confidence 3456777666555 68999999999999999999999965543322
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEA 247 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~ 247 (274)
|+-..+..+++.-....+.||||+.||-.+...+.++.++-. |.. .+-+|.++ +++..+...
T Consensus 585 --PedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~-GtDvA~eaADvvL~~~dL~~v~~a 650 (713)
T COG2217 585 --PEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGS-GTDVAIEAADVVLMRDDLSAVPEA 650 (713)
T ss_pred --cHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecC-CcHHHHHhCCEEEecCCHHHHHHH
Confidence 233345555555444789999999999999999998877554 443 45566654 347776664
|
|
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0032 Score=52.08 Aligned_cols=100 Identities=17% Similarity=0.206 Sum_probs=76.2
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCC---CCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGL---EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl---~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
..++++...++.. +.+++|.|+++....+.+....+- ..+++..+-. .+|
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt-~iG----------------------- 178 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT-TIG----------------------- 178 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc-ccc-----------------------
Confidence 5678888888776 589999999998877766654432 2222222221 222
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~ 230 (274)
.|-....+..+.+..|.++.+.++.-|.+.-..+|+.+|+.+..+..+.+
T Consensus 179 -~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgn 228 (254)
T KOG2630|consen 179 -LKVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGN 228 (254)
T ss_pred -ceehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCCC
Confidence 27778899999999999999999999999999999999999988766554
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00053 Score=54.43 Aligned_cols=76 Identities=20% Similarity=0.203 Sum_probs=48.9
Q ss_pred CCCcEEEEeCCChHHHHHH----HHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCH--HHHHHH
Q 024023 118 MPQRKIIFTNADQKHAMEV----LGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL--EAIETA 191 (274)
Q Consensus 118 l~~~~~i~s~~~~~~~~~~----l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~--~~~~~~ 191 (274)
-|..++++|+.+..-+... .+.+.+....-.++.++ ||+| ...-.+
T Consensus 129 RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd----------------------------k~k~~qy~Kt~~ 180 (237)
T COG3700 129 RGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD----------------------------KPKPGQYTKTQW 180 (237)
T ss_pred cCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC----------------------------CCCcccccccHH
Confidence 3688999999776544332 23344443333455555 4433 233455
Q ss_pred HHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 192 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 192 l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
+++-++ -++.|||.+||.+|+++|+.-+-+
T Consensus 181 i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 181 IQDKNI----RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred HHhcCc----eEEecCCchhhhHHHhcCccceeE
Confidence 655554 479999999999999999977654
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00059 Score=67.42 Aligned_cols=137 Identities=15% Similarity=0.095 Sum_probs=83.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |++++++|+.+...+..+.+.+|+.+ .++++++.....+- +.++..+-.....+......
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~---~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~vfAr 517 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT---NIYTADVLLKGDNR-DDLPSGELGEMVEDADGFAE 517 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC---CCcCHHHhcCCcch-hhCCHHHHHHHHHhCCEEEe
Confidence 4457777776666 69999999999999999999999963 23333322111000 00000000000000112234
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEA 247 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~ 247 (274)
-.|+-...+.+.+.-....+.|+||+.||..+.+.+.++.++- ++.. +..+|.++ +++..+...
T Consensus 518 ~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~a 585 (755)
T TIGR01647 518 VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDA 585 (755)
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHH
Confidence 4566666677766666678999999999999999999997754 4443 45566665 345555543
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00031 Score=55.63 Aligned_cols=85 Identities=18% Similarity=0.219 Sum_probs=64.0
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCC-Ccc-ceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 104 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCF-EGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~-~~f-d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
.+.+.||+.++|+.++ +.++|+|++.+..+..+++.++.. .+| +.+++.++....
T Consensus 56 ~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~--------------------- 114 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGSP--------------------- 114 (156)
T ss_pred EEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCCC---------------------
Confidence 4578899999999994 789999999999999999999988 488 667777653311
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAK 216 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~ 216 (274)
..| .+-.-+|.+.+.+++|+|++.-...-.
T Consensus 115 ~~K-------dL~~i~~~d~~~vvivDd~~~~~~~~~ 144 (156)
T TIGR02250 115 HTK-------SLLRLFPADESMVVIIDDREDVWPWHK 144 (156)
T ss_pred ccc-------cHHHHcCCCcccEEEEeCCHHHhhcCc
Confidence 012 121335788899999999996554433
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00047 Score=69.47 Aligned_cols=118 Identities=12% Similarity=0.132 Sum_probs=81.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc--ceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
+|.++++++++.| |++++++||....-+..+.+.+|+..-- +.++++.+..... ..++.+..... ...
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~-~~el~~~~~~~------~Vf 619 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALS-DEELAELVEEL------SVF 619 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcC-HHHHHHHhhhC------cEE
Confidence 4567777776666 7999999999999999999999987544 3366666543210 00111111111 133
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~ 230 (274)
.+-.|+-..++.+.+.-...-+.+.||+.||..|.+.|.++..+...|.+
T Consensus 620 ARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtd 669 (917)
T COG0474 620 ARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTD 669 (917)
T ss_pred EEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHH
Confidence 45556666666666666667899999999999999999999887776665
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00082 Score=64.97 Aligned_cols=136 Identities=13% Similarity=0.120 Sum_probs=88.0
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccc----eeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFE----GIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
+|.|++.+.++.+ |+++..+|+....-+..+.+++|+...-+ ..+++.++... +..+.........
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~l-------s~~~~~~~~~~~~ 656 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDL-------SDEELDDAVRRVL 656 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcC-------CHHHHHHHhhcce
Confidence 4567777766665 79999999999999999999999865544 34555543321 1111111122222
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHH
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 248 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l 248 (274)
+...-.|....++.+.+.-..+=+.|-||+.||-.+.+.+.++.++--+|.. +..+|.++ ++|..+..++
T Consensus 657 vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAV 730 (972)
T KOG0202|consen 657 VFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAV 730 (972)
T ss_pred EEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHH
Confidence 2223344455556666655557788999999999999999999887656664 55566655 3455555443
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0017 Score=66.05 Aligned_cols=136 Identities=10% Similarity=0.055 Sum_probs=85.0
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc------------------------ceeEecccCCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF------------------------EGIICFETINPR 158 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f------------------------d~i~~~~~~~~~ 158 (274)
++.|++.+.++.+ |++++++|+.+...+....+.+|+..-- ..++++.+....
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 3457787777766 6999999999999999999999984210 023333322210
Q ss_pred CCCCCCCCcccccccCc-ccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcc
Q 024023 159 LQPADNTDGIENNSFSS-NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPAD 235 (274)
Q Consensus 159 ~~~~~~~~~~~~~~~~~-~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~ 235 (274)
.+.-......+ .......-.|+-..++.+.+.-....+.++||+.||..|.+.+.++.++-..|.. +..+|
T Consensus 648 ------~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aAD 721 (997)
T TIGR01106 648 ------TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAAD 721 (997)
T ss_pred ------CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhc
Confidence 00000000000 0012334455555566655555556789999999999999999999876444443 56678
Q ss_pred ccccC--HhHHHHH
Q 024023 236 HALNS--IHNIKEA 247 (274)
Q Consensus 236 ~~~~~--l~~l~~~ 247 (274)
+++.+ |..+...
T Consensus 722 ivL~dd~f~~Iv~a 735 (997)
T TIGR01106 722 MILLDDNFASIVTG 735 (997)
T ss_pred eEEecCCHHHHHHH
Confidence 88776 7777765
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0024 Score=50.26 Aligned_cols=44 Identities=34% Similarity=0.552 Sum_probs=33.8
Q ss_pred HHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCCCCCcccc
Q 024023 190 TAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPVPPADHA 237 (274)
Q Consensus 190 ~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~~~~a~~~ 237 (274)
.+.+..+++ +++.|+. |-.+.|+++|++.+.+++.+++.+++-.
T Consensus 128 ~~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynRkp~~~n 172 (194)
T COG5663 128 EAVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKN 172 (194)
T ss_pred hhhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccccchHHH
Confidence 445555664 5888998 7789999999999999999986665443
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.012 Score=54.62 Aligned_cols=97 Identities=9% Similarity=0.021 Sum_probs=58.3
Q ss_pred ChhHHHHHHhCCCcEEEEeCCChHHHHHHHHH-cCCCCccceeEeccc-CCCCCCCCCCCCcccccccCcccccCCCCCH
Q 024023 108 DPVLRNLLLSMPQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFET-INPRLQPADNTDGIENNSFSSNQRILCKPSL 185 (274)
Q Consensus 108 ~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~-~gl~~~fd~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~ 185 (274)
.+...+..+..+ +.+++|..++-+++.+++. +|. |.|++.+= +. +.=+.+|.+.+.++ .
T Consensus 98 ~~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTEL~v~---------~~G~~TG~~~G~n~-----~ 158 (498)
T PLN02499 98 DMEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSELVVN---------RFGFATGFIRGTDV-----D 158 (498)
T ss_pred CHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeeeEEEe---------eccEEEEEEecCcc-----H
Confidence 355667777766 9999999999999999998 666 55555441 10 00113444443222 3
Q ss_pred HH-HHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 186 EA-IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 186 ~~-~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
+. ...+.+.+|- ....+-+||+..|-.-..- |+-+.+.
T Consensus 159 ek~~~rl~~~~g~-~~~~vg~~~~~~~~~f~~~--ck~~~~~ 197 (498)
T PLN02499 159 QSVANRVANLFVD-ERPQLGLGRISASSSFLSL--CKEQIHP 197 (498)
T ss_pred HHHHHHHHHHhCc-cCceecccCCcccchhhhh--CceEEec
Confidence 33 4445555663 2447888998877665543 4445443
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0076 Score=49.42 Aligned_cols=129 Identities=17% Similarity=0.190 Sum_probs=70.4
Q ss_pred CChhHHHHHHhC--CCcEEEEeCCChHHHHHHHHHcCCCCc--cceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 107 PDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDC--FEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 107 ~~~~~~~~L~~l--~~~~~i~s~~~~~~~~~~l~~~gl~~~--fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
.-|++.++|+.+ .+.++|.|.+....+..++..+++... +...+.-+..... .....+......|
T Consensus 46 kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~-----------~~~~~~~g~~~vK 114 (195)
T TIGR02245 46 MRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMI-----------TVHTPRRGKFDVK 114 (195)
T ss_pred eCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccce-----------eeEeeccCcEEEe
Confidence 458899999998 488999999999999999999876432 1112222211000 0000001111124
Q ss_pred CCHHHHHHHHHHhCC--CCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHh
Q 024023 183 PSLEAIETAIRIANV--DPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 183 p~~~~~~~~l~~~g~--~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
+ +..+-.++|. +.+++++|+|++.-..+--..|+..--.... ...+.-=..+.+|.++|+.+..
T Consensus 115 d----L~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~---~~~~~~D~eL~~L~~yL~~la~ 180 (195)
T TIGR02245 115 P----LGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKA---HANRGTDQELLKLTQYLKTIAE 180 (195)
T ss_pred e----cHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCcccc---CCCCcccHHHHHHHHHHHHHhc
Confidence 3 2223235543 7789999999997654443445543211111 1011112236677777777765
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0059 Score=53.97 Aligned_cols=86 Identities=15% Similarity=0.117 Sum_probs=62.9
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCC---hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNAD---QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~---~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
++||+.++|+.| |.+++++||.+ .......++.+|+...++.|+++.
T Consensus 45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~--------------------------- 97 (311)
T PLN02645 45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS--------------------------- 97 (311)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH---------------------------
Confidence 456777766655 68999999987 445555668889877777777764
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEE
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 224 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~ 224 (274)
......++..+....+.++|+++..+.+.++++|+.++.
T Consensus 98 -----~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 98 -----FAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred -----HHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 245566666666545568888888999999999998654
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0061 Score=46.35 Aligned_cols=45 Identities=11% Similarity=0.118 Sum_probs=27.6
Q ss_pred CChhHHHHHH---hCCCcEEEEeCCChH---------------HHHHHHHHcCCCCccceeEecc
Q 024023 107 PDPVLRNLLL---SMPQRKIIFTNADQK---------------HAMEVLGRLGLEDCFEGIICFE 153 (274)
Q Consensus 107 ~~~~~~~~L~---~l~~~~~i~s~~~~~---------------~~~~~l~~~gl~~~fd~i~~~~ 153 (274)
+.+++.+.|+ ..|..++++|+.+.. .+...|++.++. +|.++.+-
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~~~k 87 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIYVGK 87 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEEeCC
Confidence 3344555554 346778888887654 445677777776 57766543
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0011 Score=56.48 Aligned_cols=43 Identities=12% Similarity=-0.030 Sum_probs=36.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcC----ChhcHHHHHHcCCeEEEECC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGD----s~~Di~~a~~~G~~~v~v~~ 227 (274)
+-.|..+++.++++ ++++++||| +.||++|.+.++.....+.+
T Consensus 186 gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 186 GWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred CCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 57789999999988 599999999 89999999987776566653
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0011 Score=67.85 Aligned_cols=50 Identities=16% Similarity=0.234 Sum_probs=39.3
Q ss_pred CCeEEEEcCChhcHHHHHHcCCeEEEECCCC---CCCCccccccCHhHHHHHHH
Q 024023 199 PKKTIFFDDSARNIASAKAAGLHTVIVGSSV---PVPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 199 ~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~---~~~~a~~~~~~l~~l~~~l~ 249 (274)
...+.++|||.||+.|.+.|.++. ++...+ ....+|+++.++..|...|-
T Consensus 768 ~~~vl~iGDG~ND~~mlk~AdVGI-gi~g~eg~qA~~aaD~~i~~F~~L~~lll 820 (1057)
T TIGR01652 768 GKTTLAIGDGANDVSMIQEADVGV-GISGKEGMQAVMASDFAIGQFRFLTKLLL 820 (1057)
T ss_pred CCeEEEEeCCCccHHHHhhcCeee-EecChHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 467999999999999999999886 343222 24579999999888888763
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0039 Score=61.48 Aligned_cols=70 Identities=11% Similarity=0.034 Sum_probs=55.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
+..|..+++.+++ +.+++.++++||+.||+.|.+.++.....+..|.....|.+++++-+++..+|+.+.
T Consensus 655 ~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~ 724 (726)
T PRK14501 655 GVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPGESRARYRLPSQREVRELLRRLL 724 (726)
T ss_pred CCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCCCCcceEeCCCHHHHHHHHHHHh
Confidence 4667889999998 788899999999999999999874222223333346789999999999988888765
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.019 Score=49.19 Aligned_cols=97 Identities=19% Similarity=0.160 Sum_probs=59.9
Q ss_pred HHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC-CCC----Ccccccc--cCcccccCCCC-CHH
Q 024023 115 LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA-DNT----DGIENNS--FSSNQRILCKP-SLE 186 (274)
Q Consensus 115 L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~-~~~----~~~~~~~--~~~~~~~~~kp-~~~ 186 (274)
|+..+.-+++=|.|+.+++...++.+++.++||.+++....... .+. ... +-++... +..-....+-| +|.
T Consensus 154 Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~-~~~~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPr 232 (297)
T PF05152_consen 154 LKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGE-YNSRVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPR 232 (297)
T ss_pred HHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCc-CCccceeecccceEEeccceEEeCCcCCCCCCCCe
Confidence 33445667888999999999999999999999999987633211 011 111 1122111 11111111123 367
Q ss_pred HHHHHHHHhCCCCC-eEEEEcCCh-hcH
Q 024023 187 AIETAIRIANVDPK-KTIFFDDSA-RNI 212 (274)
Q Consensus 187 ~~~~~l~~~g~~~~-~~i~VGDs~-~Di 212 (274)
.+...|++.|+..- .+-.|+|=. ||+
T Consensus 233 VVL~yL~k~gvny~KtiTLVDDL~~Nn~ 260 (297)
T PF05152_consen 233 VVLWYLRKKGVNYFKTITLVDDLKSNNY 260 (297)
T ss_pred ehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 88899999999764 455788877 564
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0097 Score=53.80 Aligned_cols=71 Identities=15% Similarity=0.142 Sum_probs=57.2
Q ss_pred CCCHHHHHHHHHHhCCCCCe---EEEEcCChhcHHHHHH-----cCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHh
Q 024023 182 KPSLEAIETAIRIANVDPKK---TIFFDDSARNIASAKA-----AGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~---~i~VGDs~~Di~~a~~-----~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
-.|..+++.+++.+|+...+ .++|||..||..|.+. .|+. |.+..+...-.|.|.+.+..++.++|..+..
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~-I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~ 378 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYG-ILVSSVPKESNAFYSLRDPSEVMEFLKSLVT 378 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceE-EEEecCCCCccceEEcCCHHHHHHHHHHHHH
Confidence 56788999999999987663 3899999999999986 3654 4455555566789999999999999887754
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.011 Score=54.12 Aligned_cols=82 Identities=18% Similarity=0.111 Sum_probs=59.9
Q ss_pred HHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHH
Q 024023 115 LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRI 194 (274)
Q Consensus 115 L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~ 194 (274)
|..-|+-++|.|-.....+.....+. -|.++.-+++.. +...| -||.+.++.++++
T Consensus 267 l~kqGVlLav~SKN~~~da~evF~kh-----p~MiLkeedfa~-------~~iNW------------~~K~eNirkIAkk 322 (574)
T COG3882 267 LKKQGVLLAVCSKNTEKDAKEVFRKH-----PDMILKEEDFAV-------FQINW------------DPKAENIRKIAKK 322 (574)
T ss_pred HHhccEEEEEecCCchhhHHHHHhhC-----CCeEeeHhhhhh-------heecC------------CcchhhHHHHHHH
Confidence 33445667788888888888777664 244544443321 12222 8999999999999
Q ss_pred hCCCCCeEEEEcCChhcHHHHHHcCC
Q 024023 195 ANVDPKKTIFFDDSARNIASAKAAGL 220 (274)
Q Consensus 195 ~g~~~~~~i~VGDs~~Di~~a~~~G~ 220 (274)
+++..+-.+|++|++...+-.+..+-
T Consensus 323 lNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 323 LNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred hCCCccceEEecCCHHHHHHHHhcCc
Confidence 99999999999999988888887763
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.013 Score=57.56 Aligned_cols=102 Identities=17% Similarity=0.190 Sum_probs=67.6
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHH
Q 024023 111 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190 (274)
Q Consensus 111 ~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 190 (274)
+...|+.+|.+++++|+.....++...+.+| ++.|++-- +|. -...
T Consensus 731 av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~aev----------------------------~P~--~K~~ 776 (951)
T KOG0207|consen 731 AVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYAEV----------------------------LPE--QKAE 776 (951)
T ss_pred HHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEecc----------------------------Cch--hhHH
Confidence 4445666789999999999999999999998 45666532 322 2233
Q ss_pred HHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccc--cCHhHHHH
Q 024023 191 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHAL--NSIHNIKE 246 (274)
Q Consensus 191 ~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~--~~l~~l~~ 246 (274)
..+++.-....+.||||+.||-.+...+.++.+....+.- .+.+|.++ +++.++..
T Consensus 777 ~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ 835 (951)
T KOG0207|consen 777 KIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPF 835 (951)
T ss_pred HHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHH
Confidence 4444443446799999999999988888888665433222 34445443 44555444
|
|
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0064 Score=55.20 Aligned_cols=112 Identities=21% Similarity=0.240 Sum_probs=83.7
Q ss_pred HHHHHHhccCCCCCCCCChhHH--HHHHhC---CCcEEEEeCC--ChHHHHHHHHHcCCCCccceeEecccCCCCCCCCC
Q 024023 91 EFHAFVHGKLPYEKLKPDPVLR--NLLLSM---PQRKIIFTNA--DQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 163 (274)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~--~~L~~l---~~~~~i~s~~--~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~ 163 (274)
.+.+...-....++..++|..+ ++.+.+ +.+++++|.. +.+..+.+|.+.|.+..--.++.+.+....
T Consensus 82 ~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~----- 156 (635)
T COG5610 82 SFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLK----- 156 (635)
T ss_pred HHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehh-----
Confidence 3444443333344555555443 555555 4789999985 567888899999887554456777766654
Q ss_pred CCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEE
Q 024023 164 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIV 225 (274)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v 225 (274)
|.+...+..++...++++...+.+||+. .|+.++++.|+.+...
T Consensus 157 ------------------KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 157 ------------------KNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred ------------------cccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence 8889999999999999999999999999 7999999999988643
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.04 Score=56.67 Aligned_cols=142 Identities=15% Similarity=0.171 Sum_probs=80.5
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccC---------------CC-------CCCC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETI---------------NP-------RLQP 161 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~---------------~~-------~~~~ 161 (274)
+.|++.+.++.| |++++++||.+..-+..+.+.+|+-.--+.++..+.. .. ..+|
T Consensus 657 lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (1054)
T TIGR01657 657 LKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIP 736 (1054)
T ss_pred CCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcccccccccccc
Confidence 456777666665 6999999999999999999999984322222221100 00 0000
Q ss_pred CCC----CCccc--------cc---------------ccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHH
Q 024023 162 ADN----TDGIE--------NN---------------SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIAS 214 (274)
Q Consensus 162 ~~~----~~~~~--------~~---------------~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~ 214 (274)
... .+... .+ ....+..+...-.|+-...+.+.+.-...-+.|+|||.||..+
T Consensus 737 ~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~A 816 (1054)
T TIGR01657 737 YPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGA 816 (1054)
T ss_pred CcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHH
Confidence 000 00000 00 0001111223444555555555555445679999999999999
Q ss_pred HHHcCCeEEEECCCCCCCCcccc--ccCHhHHHHHHH
Q 024023 215 AKAAGLHTVIVGSSVPVPPADHA--LNSIHNIKEAIP 249 (274)
Q Consensus 215 a~~~G~~~v~v~~~~~~~~a~~~--~~~l~~l~~~l~ 249 (274)
.+.|.++.++... +....++++ -+++..+..+++
T Consensus 817 LK~AdVGIam~~~-das~AA~f~l~~~~~~~I~~~I~ 852 (1054)
T TIGR01657 817 LKQADVGISLSEA-EASVAAPFTSKLASISCVPNVIR 852 (1054)
T ss_pred HHhcCcceeeccc-cceeecccccCCCcHHHHHHHHH
Confidence 9999998876543 222445555 346666666554
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.004 Score=64.23 Aligned_cols=63 Identities=13% Similarity=0.121 Sum_probs=47.4
Q ss_pred CeEEEEcCChhcHHHHHHcCCeEEEECCCC---CCCCccccccCHhHHHHHHHHHHhhcccchhhhc
Q 024023 200 KKTIFFDDSARNIASAKAAGLHTVIVGSSV---PVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVI 263 (274)
Q Consensus 200 ~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~---~~~~a~~~~~~l~~l~~~l~~~~~~~~~~~~~~~ 263 (274)
.-+++||||.||+.|.+.|.++. ++...+ ....+|+.+..|..|..+|-..-..+-.+++..+
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i 937 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGV-GISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMI 937 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeee-eecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHH
Confidence 45899999999999999998876 443333 1567999999999999987766555555544443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.033 Score=52.58 Aligned_cols=94 Identities=14% Similarity=0.149 Sum_probs=66.4
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| +.+++++|+.....+....+.+|+ ++ .
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~~------------------------------~ 389 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------FA------------------------------R 389 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------ee------------------------------c
Confidence 4456666666655 688999999999999999999986 11 1
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccC
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 240 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~ 240 (274)
-.|+-...+.+++.-....+.+|||+.||..+.+.++++.++. ....+|.++.+
T Consensus 390 ~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~----a~~~adivl~~ 443 (499)
T TIGR01494 390 VTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG----AKAAADIVLLD 443 (499)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc----hHHhCCeEEec
Confidence 2244444555554444477999999999999999999875543 34456777664
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.017 Score=57.81 Aligned_cols=75 Identities=8% Similarity=-0.019 Sum_probs=58.2
Q ss_pred CCCCHHHHHHHHHH---hCCCCCeEEEEcCChhcHHHHHHcCCe-----------EEEECCCCCCCCccccccCHhHHHH
Q 024023 181 CKPSLEAIETAIRI---ANVDPKKTIFFDDSARNIASAKAAGLH-----------TVIVGSSVPVPPADHALNSIHNIKE 246 (274)
Q Consensus 181 ~kp~~~~~~~~l~~---~g~~~~~~i~VGDs~~Di~~a~~~G~~-----------~v~v~~~~~~~~a~~~~~~l~~l~~ 246 (274)
+..|..+++.+++. +|..++.+++|||+.||..|.+.++-. .+.|.-|.....|.|.+++..++.+
T Consensus 760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~ 839 (854)
T PLN02205 760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVR 839 (854)
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCCccCeEecCCHHHHHH
Confidence 46778899988754 688999999999999999999987621 1223334445778899999999999
Q ss_pred HHHHHHhhc
Q 024023 247 AIPEIWEGE 255 (274)
Q Consensus 247 ~l~~~~~~~ 255 (274)
.|+.+.+..
T Consensus 840 lL~~L~~~~ 848 (854)
T PLN02205 840 LMQGLASVS 848 (854)
T ss_pred HHHHHHhcc
Confidence 998887543
|
|
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.095 Score=47.12 Aligned_cols=114 Identities=18% Similarity=0.151 Sum_probs=72.6
Q ss_pred hhHHHHHHhCCCcEEEEeCCChHHHHHHHHH---cCCCCccceeEecccCCCCCCCCCCCCcc-----------cccc-c
Q 024023 109 PVLRNLLLSMPQRKIIFTNADQKHAMEVLGR---LGLEDCFEGIICFETINPRLQPADNTDGI-----------ENNS-F 173 (274)
Q Consensus 109 ~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~---~gl~~~fd~i~~~~~~~~~~~~~~~~~~~-----------~~~~-~ 173 (274)
|-....++..|.++.++||............ .++..+||.+++.-.- |-=|..+. ...+ .
T Consensus 204 v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~K-----p~ff~e~~vlreV~t~~g~l~~g~~ 278 (424)
T KOG2469|consen 204 VPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAK-----PGFFHEGTVLREVEPQEGLLKNGDN 278 (424)
T ss_pred ccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccC-----Cccccccceeeeecccccccccccc
Confidence 3466667777889999999887766655543 2577889887665311 00011111 0111 1
Q ss_pred CcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChh-cH-HHHHHcCCeEEEECC
Q 024023 174 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NI-ASAKAAGLHTVIVGS 227 (274)
Q Consensus 174 ~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~-Di-~~a~~~G~~~v~v~~ 227 (274)
..-....+++++.....+.+.+++...+++++||+.. |+ ..-+.-|+.++.+..
T Consensus 279 ~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 279 TGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred CCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence 1112334566777888899999999999999999994 64 444567888887743
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.083 Score=38.48 Aligned_cols=81 Identities=19% Similarity=0.187 Sum_probs=52.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCCh---HHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~---~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
.++||+.++++.| +.+++++||++. ......|+.+|+.---+.|+++-.
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~------------------------- 68 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGM------------------------- 68 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHH-------------------------
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHH-------------------------
Confidence 5678888888777 688999999753 456667788898855577777642
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCC
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGL 220 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~ 220 (274)
.....+++. ....+++++|-. ...+.++++|+
T Consensus 69 -------~~~~~l~~~-~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 69 -------AAAEYLKEH-KGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp -------HHHHHHHHH-TTSSEEEEES-H-HHHHHHHHTTE
T ss_pred -------HHHHHHHhc-CCCCEEEEEcCH-HHHHHHHHcCC
Confidence 444555552 335678888765 44556666664
|
... |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.1 Score=43.93 Aligned_cols=78 Identities=12% Similarity=0.069 Sum_probs=57.8
Q ss_pred EEEeCCChHHHHHHHHHcCCCCcc--ceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCC
Q 024023 123 IIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 200 (274)
Q Consensus 123 ~i~s~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~ 200 (274)
+++|++.---...+.=-+|+.++| +.|+++-.+ .|.+.|+.+.+++|-+..
T Consensus 179 vLVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~kv---------------------------GK~~cFe~I~~Rfg~p~~ 231 (274)
T TIGR01658 179 VLVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIKV---------------------------GKLQCFKWIKERFGHPKV 231 (274)
T ss_pred EEEEcCccHHHHHHHHHhccCCccccccccchhhc---------------------------chHHHHHHHHHHhCCCCc
Confidence 466665432222233334666665 557877653 447899999999999788
Q ss_pred eEEEEcCChhcHHHHHHcCCeEEEECC
Q 024023 201 KTIFFDDSARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 201 ~~i~VGDs~~Di~~a~~~G~~~v~v~~ 227 (274)
..++|||+..--.+|+..+++++-+..
T Consensus 232 ~f~~IGDG~eEe~aAk~l~wPFw~I~~ 258 (274)
T TIGR01658 232 RFCAIGDGWEECTAAQAMNWPFVKIDL 258 (274)
T ss_pred eEEEeCCChhHHHHHHhcCCCeEEeec
Confidence 999999999999999999999987755
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.17 Score=48.74 Aligned_cols=77 Identities=12% Similarity=0.139 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhHHHHHHHHHHhhcccchhh
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHNIKEAIPEIWEGEGEQLEQ 261 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~l~~~l~~~~~~~~~~~~~ 261 (274)
|.++.+.+.++-| ..+.+|||+-||+.|-+.+.++.-.++.... .-.||+-+..|..+.+.|-..-...=.+...
T Consensus 769 KA~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~ 845 (1051)
T KOG0210|consen 769 KAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYKRSAK 845 (1051)
T ss_pred HHHHHHHHHHhhC---ceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHhhccccchHHHHHH
Confidence 3445544444445 7799999999999998887665433333222 4468999999999998876555554444443
Q ss_pred hc
Q 024023 262 VI 263 (274)
Q Consensus 262 ~~ 263 (274)
+.
T Consensus 846 la 847 (1051)
T KOG0210|consen 846 LA 847 (1051)
T ss_pred HH
Confidence 33
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.17 Score=39.98 Aligned_cols=21 Identities=19% Similarity=0.313 Sum_probs=18.3
Q ss_pred EEEEcCChhcHHHHHHcCCeE
Q 024023 202 TIFFDDSARNIASAKAAGLHT 222 (274)
Q Consensus 202 ~i~VGDs~~Di~~a~~~G~~~ 222 (274)
...+|++.+|+.+-+++|++.
T Consensus 122 ~agfGN~~tDv~aY~~vGip~ 142 (157)
T PF08235_consen 122 YAGFGNRSTDVIAYKAVGIPK 142 (157)
T ss_pred EEecCCcHHHHHHHHHcCCCh
Confidence 557899999999999999964
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.067 Score=46.00 Aligned_cols=48 Identities=23% Similarity=0.144 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcC---CeEEEECCCC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG---LHTVIVGSSV 229 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G---~~~v~v~~~~ 229 (274)
..|...+..++++.+....-+++.||..+|=.+..... -.++-+..+.
T Consensus 181 ~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~ 231 (266)
T COG1877 181 VSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGS 231 (266)
T ss_pred cchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCCc
Confidence 45788899999888877767999999999977777765 4455554443
|
|
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.11 Score=40.45 Aligned_cols=48 Identities=15% Similarity=0.140 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHHHh-C----CCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCC
Q 024023 182 KPSLEAIETAIRIA-N----VDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 182 kp~~~~~~~~l~~~-g----~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~ 229 (274)
+-||..-.+..+.+ | ..++++++|||+. +||-+|...|...+|...|.
T Consensus 117 ~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv 170 (190)
T KOG2961|consen 117 VKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGV 170 (190)
T ss_pred ccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecccc
Confidence 34444555566554 4 5789999999999 99999999999999987765
|
|
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.057 Score=47.59 Aligned_cols=112 Identities=16% Similarity=0.176 Sum_probs=69.7
Q ss_pred hhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHc---CCCCccceeEecccCCCCCCCCCCCCcccccccCccc-----
Q 024023 109 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ----- 177 (274)
Q Consensus 109 ~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 177 (274)
|.+..+|+.| |.++.++||++-+++..-.+.+ .+.++||.|+.--+- |.=+.|...-...+.+-
T Consensus 243 ~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~K-----P~Fftde~rPfR~~dek~~sl~ 317 (510)
T KOG2470|consen 243 PQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANK-----PEFFTDERRPFRKYDEKRGSLL 317 (510)
T ss_pred HHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCC-----CcccccccCcchhhcccccchh
Confidence 5566666666 5889999999999988655443 456889997764321 11223333100000000
Q ss_pred ------ccCCC-CCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHH-HcCCeEEEE
Q 024023 178 ------RILCK-PSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIV 225 (274)
Q Consensus 178 ------~~~~k-p~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~-~~G~~~v~v 225 (274)
..+|| -....+...++--|....+++++||++ +|+.-.. ..||.+..+
T Consensus 318 wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAI 374 (510)
T KOG2470|consen 318 WDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAI 374 (510)
T ss_pred hhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccc
Confidence 00111 012346677777889899999999999 7987766 789988655
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.88 Score=37.86 Aligned_cols=41 Identities=12% Similarity=-0.023 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhCC-CCC-eEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 185 LEAIETAIRIANV-DPK-KTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 185 ~~~~~~~l~~~g~-~~~-~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
..+...+++.+.. ... .++.+|||+||+.+.. .+...+.|.
T Consensus 193 g~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~e-v~d~AfiV~ 235 (274)
T COG3769 193 GQAANWLLETYRRLGGARTTLGLGDGPNDAPLLE-VMDYAFIVK 235 (274)
T ss_pred cHHHHHHHHHHHhcCceeEEEecCCCCCcccHHH-hhhhheeec
Confidence 3355555555433 223 4899999999998875 554555453
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.052 Score=46.26 Aligned_cols=37 Identities=19% Similarity=0.237 Sum_probs=29.3
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCC
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHI 57 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~ 57 (274)
|++|+|+||+||||+++...+.....+++++ +++.|+
T Consensus 3 ~~~klia~DlDGTLL~~~~~is~~~~~ai~~--l~~~Gi 39 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNPITQEMKDTLAK--LKSKGF 39 (247)
T ss_pred CCCeEEEEECcCCCcCCCCCCCHHHHHHHHH--HHHCCC
Confidence 4589999999999999888888888887766 334454
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.26 Score=44.35 Aligned_cols=74 Identities=11% Similarity=0.058 Sum_probs=56.3
Q ss_pred CCCHHHHHHHHHHhCCCC---CeEEEEcCChhcHHHHHHcC----CeEEEECCCCCCCCccccccCHhHHHHHHHHHHhh
Q 024023 182 KPSLEAIETAIRIANVDP---KKTIFFDDSARNIASAKAAG----LHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 254 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~---~~~i~VGDs~~Di~~a~~~G----~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~~ 254 (274)
-.|+.+++.+++.+|... .-.+|+||-.+|-.+.+.+. --.|.|........|.|.+.+..++.++|..+..-
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~ 361 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEW 361 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHH
Confidence 456889999999998753 35899999999988887652 12345553334577999999999999999888654
Q ss_pred c
Q 024023 255 E 255 (274)
Q Consensus 255 ~ 255 (274)
.
T Consensus 362 ~ 362 (366)
T PLN03017 362 K 362 (366)
T ss_pred H
Confidence 3
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.23 Score=44.57 Aligned_cols=71 Identities=17% Similarity=0.157 Sum_probs=54.2
Q ss_pred CCCHHHHHHHHHHhCCCCC---eEEEEcCChhcHHHHHHc-----CCeEEEECCCCCCCCccccccCHhHHHHHHHHHHh
Q 024023 182 KPSLEAIETAIRIANVDPK---KTIFFDDSARNIASAKAA-----GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~---~~i~VGDs~~Di~~a~~~-----G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
-.|..+++.+++.++.... -++|+||-.+|-.+.+.+ |++ +.|..+.....|.|.+.+..++.++|..+..
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~g-I~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLG-ILVSKYAKETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCcc-EEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 4568899999999886533 389999999998887754 332 4454433456799999999999999988764
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.043 Score=45.94 Aligned_cols=26 Identities=23% Similarity=0.280 Sum_probs=22.9
Q ss_pred EEEecCCCccCCchhHHHHHHHHHHH
Q 024023 24 LLFDLDDTLYPLSTGFNLACRRNIEE 49 (274)
Q Consensus 24 viFDlDGTL~d~~~~~~~~~~~~~~~ 49 (274)
|+||+||||+++...+.+...+++.+
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~ 26 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKE 26 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHH
T ss_pred cEEEECCceecCCCeeCHHHHHHHHh
Confidence 68999999999888888888888877
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.51 E-value=1.3 Score=38.24 Aligned_cols=141 Identities=12% Similarity=0.091 Sum_probs=75.3
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCCh---HHHHHHHHH-cCCCCccceeEecccCCCCCCCCCCCCcccccccCc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQ---KHAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 175 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~---~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (274)
..-.++||+.++|+.| |.+++++||++. +.+...|+. .+++...+.|+++-..... ++.... ..+
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~~-----~l~~~~---~~~ 92 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATAD-----YLAKQK---PGK 92 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHHH-----HHHhhC---CCC
Confidence 4457889999998877 589999999765 345566766 5666667888887543210 000000 000
Q ss_pred ccccCCCCCHHHHHHHHHHhCCC----C-C---eEEEEcCChh-cHHH------HHHcCCeEEEECCCCCCCCccccccC
Q 024023 176 NQRILCKPSLEAIETAIRIANVD----P-K---KTIFFDDSAR-NIAS------AKAAGLHTVIVGSSVPVPPADHALNS 240 (274)
Q Consensus 176 ~~~~~~kp~~~~~~~~l~~~g~~----~-~---~~i~VGDs~~-Di~~------a~~~G~~~v~v~~~~~~~~a~~~~~~ 240 (274)
..... ..+.+...++.+|+. . + .++.+|...+ ..+. +...|+++++-+.....+..+-....
T Consensus 93 kv~vi---G~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD~~~p~~~g~~pg 169 (269)
T COG0647 93 KVYVI---GEEGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPDLTVPTERGLRPG 169 (269)
T ss_pred EEEEE---CCcchHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCCccccCCCCCccC
Confidence 00011 134566777777641 1 1 3555655542 2222 22356666655554444444444555
Q ss_pred HhHHHHHHHHHHhh
Q 024023 241 IHNIKEAIPEIWEG 254 (274)
Q Consensus 241 l~~l~~~l~~~~~~ 254 (274)
-..+...++.+-+.
T Consensus 170 aGai~~~~~~~tg~ 183 (269)
T COG0647 170 AGAIAALLEQATGR 183 (269)
T ss_pred cHHHHHHHHHhhCC
Confidence 55555555544443
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=93.22 E-value=0.7 Score=40.06 Aligned_cols=84 Identities=19% Similarity=0.203 Sum_probs=52.6
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCC---hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNAD---QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~---~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
++|++.++|+.| |.+++++||++ .......++++|+....+.++++.
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~--------------------------- 71 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSA--------------------------- 71 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHH---------------------------
Confidence 445666666555 68899999965 334446778888865556666653
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEE
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v 223 (274)
......+++......+++++|+.. ....++..|+..+
T Consensus 72 -----~~~~~~l~~~~~~~~~v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 72 -----LCAARLLRQPPDAPKAVYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred -----HHHHHHHHhhCcCCCEEEEEcCHH-HHHHHHHCCCEEe
Confidence 244555555444456788888753 2345566777654
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=93.19 E-value=0.6 Score=39.64 Aligned_cols=118 Identities=12% Similarity=0.060 Sum_probs=57.8
Q ss_pred CCChHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccce--eEecccCCCCCC
Q 024023 86 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETINPRLQ 160 (274)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~--i~~~~~~~~~~~ 160 (274)
.+....+.+...+ ..+.+.+|+.++++.| ++++.|+|.|--..+...+++.|.. ++. |++.. ..
T Consensus 74 ~l~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~--~~Nv~VvSN~-M~---- 142 (246)
T PF05822_consen 74 GLTKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVF--HPNVKVVSNF-MD---- 142 (246)
T ss_dssp T-BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT----BTTEEEEEE--EE----
T ss_pred CcCHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCC--CCCeEEEeee-EE----
Confidence 3445555555544 4567778888887776 5899999999999999999998654 332 22221 00
Q ss_pred CCCCCCcccccccCcccccCCCCCHHHHHHHHHHh-CC-CCCeEEEEcCChhcHHHHHHc
Q 024023 161 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA-NV-DPKKTIFFDDSARNIASAKAA 218 (274)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~-g~-~~~~~i~VGDs~~Di~~a~~~ 218 (274)
||.-..-.-+++..++.-.|-+....-...+ .+ ...+++..|||.-|+.|+...
T Consensus 143 ----Fd~~g~l~gF~~~lIH~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 143 ----FDEDGVLVGFKGPLIHTFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp ----E-TTSBEEEE-SS---TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-
T ss_pred ----ECCcceEeecCCCceEEeeCCcccccCchHHHHhccCCcEEEecCccCChHhhcCC
Confidence 0000011112222222222222111111111 22 347899999999999998765
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.24 Score=50.80 Aligned_cols=48 Identities=15% Similarity=0.165 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC---CCCccccccCHhHHHH
Q 024023 198 DPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKE 246 (274)
Q Consensus 198 ~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~---~~~a~~~~~~l~~l~~ 246 (274)
.+..+++|||+.||+.|.+.|+++. ++...+. ...+|+.+..+.=|..
T Consensus 793 ~~~~TLAIGDGANDVsMIQ~AhVGV-GIsG~EGmQAvmsSD~AIaqFrfL~r 843 (1151)
T KOG0206|consen 793 LKAVTLAIGDGANDVSMIQEAHVGV-GISGQEGMQAVMSSDFAIAQFRFLER 843 (1151)
T ss_pred CCceEEEeeCCCccchheeeCCcCe-eeccchhhhhhhcccchHHHHHHHhh
Confidence 3467999999999999999887763 3433221 3446666555554443
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=92.22 E-value=0.095 Score=42.96 Aligned_cols=27 Identities=30% Similarity=0.407 Sum_probs=19.9
Q ss_pred EEEEecCCCccCCc-hhHHHHHHHHHHH
Q 024023 23 CLLFDLDDTLYPLS-TGFNLACRRNIEE 49 (274)
Q Consensus 23 ~viFDlDGTL~d~~-~~~~~~~~~~~~~ 49 (274)
+++||+||||+++. ..+.....+++.+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~ 28 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALER 28 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHH
Confidence 47899999999865 4566666665555
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.02 E-value=0.38 Score=43.68 Aligned_cols=34 Identities=12% Similarity=0.216 Sum_probs=26.1
Q ss_pred CCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHH
Q 024023 106 KPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGR 139 (274)
Q Consensus 106 ~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~ 139 (274)
.+.+++.+.|+.|. .+++|+|+.+...+..++.-
T Consensus 141 ~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 141 LMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred cCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 44567777777773 67999999999988877753
|
|
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=91.36 E-value=1.3 Score=39.73 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHh----CCCCCeEEEEcCCh-----hcHHHHHHcCCeEEEECCCC
Q 024023 184 SLEAIETAIRIA----NVDPKKTIFFDDSA-----RNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 184 ~~~~~~~~l~~~----g~~~~~~i~VGDs~-----~Di~~a~~~G~~~v~v~~~~ 229 (274)
|.-++..+.+-+ ++.+++++.|||-. ||.. |+.++ .++|+.++.
T Consensus 350 Ks~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfk-aR~a~-~t~WIasP~ 402 (408)
T PF06437_consen 350 KSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFK-ARLAC-TTAWIASPQ 402 (408)
T ss_pred cHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcchh-hhhhc-eeeEecCHH
Confidence 355676666667 89999999999954 7874 45555 678887754
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.15 Score=39.13 Aligned_cols=114 Identities=12% Similarity=0.134 Sum_probs=64.6
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhcc
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGK 99 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (274)
+.|.+..|+|-||.|....|...+. +.++.++....... .... .. .......+.....+.
T Consensus 2 ~kk~iaIDmD~vLadll~ewv~~~N------~y~D~~lk~~di~g----------wdik---~y-v~~~~g~i~~il~ep 61 (180)
T COG4502 2 NKKTIAIDMDTVLADLLREWVKRYN------IYKDKLLKMSDIKG----------WDIK---NY-VKPECGKIYDILKEP 61 (180)
T ss_pred CCceEEeeHHHHHHHHHHHHHHHhh------hccccCcChHhhcc----------cchh---hc-cCccCCeeeeeccCc
Confidence 4578999999999997766766554 45555554332111 0000 00 000011122222332
Q ss_pred CCCCCCCCChhHHHHHHhC--CCcEEEEeCC--ChHHHHHHH----HHcCCCCccceeEecc
Q 024023 100 LPYEKLKPDPVLRNLLLSM--PQRKIIFTNA--DQKHAMEVL----GRLGLEDCFEGIICFE 153 (274)
Q Consensus 100 ~~~~~~~~~~~~~~~L~~l--~~~~~i~s~~--~~~~~~~~l----~~~gl~~~fd~i~~~~ 153 (274)
...+.+...|++...++.| .+.++|+|.. ......... +.+.+-++=..|+|+.
T Consensus 62 ~fFRnL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn 123 (180)
T COG4502 62 HFFRNLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN 123 (180)
T ss_pred chhhhcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC
Confidence 3346678899999999998 4889999976 444554443 3444444445567765
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.12 E-value=0.66 Score=43.30 Aligned_cols=119 Identities=16% Similarity=0.226 Sum_probs=82.5
Q ss_pred ChhHHHH---HHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCC
Q 024023 108 DPVLRNL---LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 184 (274)
Q Consensus 108 ~~~~~~~---L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~ 184 (274)
.||+++- |++++++.+.+|+.++--...+.+..|+++++. .-+
T Consensus 449 K~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiA----------------------------------eat 494 (681)
T COG2216 449 KPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIA----------------------------------EAT 494 (681)
T ss_pred chhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhh----------------------------------cCC
Confidence 4788775 455579999999999888888888999976542 222
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------------------------------CCCc
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------------------------------VPPA 234 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------------------------------~~~a 234 (274)
|+-...+.++..-...=+.|.||+.||-.+...+..+.++ ++|.+ ..++
T Consensus 495 PEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM-NsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGa 573 (681)
T COG2216 495 PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGA 573 (681)
T ss_pred hHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh-ccccHHHHHhhcccccCCCccceehHhhhhhhheeeccc
Confidence 4555667777776667788999999999999888877653 44442 1122
Q ss_pred cc---cccCHhHHHHHHHHHHhhcccchhh
Q 024023 235 DH---ALNSIHNIKEAIPEIWEGEGEQLEQ 261 (274)
Q Consensus 235 ~~---~~~~l~~l~~~l~~~~~~~~~~~~~ 261 (274)
-- +.+|+.....+|+.++.....++..
T Consensus 574 LTTFSIANDvAKYFaIiPA~F~~~~P~l~~ 603 (681)
T COG2216 574 LTTFSIANDVAKYFAIIPAMFAAAYPQLGA 603 (681)
T ss_pred ceeeehhhHHHHHHHHHHHHHHhhcccccc
Confidence 11 2445556666788888776666543
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.00 E-value=0.51 Score=42.34 Aligned_cols=33 Identities=9% Similarity=0.032 Sum_probs=24.4
Q ss_pred CCChhHHHHHHhC--CCcEEEEeCCChHHHHHHHH
Q 024023 106 KPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLG 138 (274)
Q Consensus 106 ~~~~~~~~~L~~l--~~~~~i~s~~~~~~~~~~l~ 138 (274)
.+.|++.+.|+.| +..++|+|+.+...+..++.
T Consensus 120 ~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 120 FMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred cCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 3446666777766 36799999999988887664
|
|
| >KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription] | Back alignment and domain information |
|---|
Probab=90.98 E-value=0.054 Score=46.40 Aligned_cols=93 Identities=14% Similarity=0.193 Sum_probs=66.0
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCC-CCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGL-EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl-~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
+...|++-++|...+ +.+++.|++.......++..+.- ...+.+.+..+..... .+
T Consensus 130 V~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~----------------~g----- 188 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLK----------------DG----- 188 (262)
T ss_pred EEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeE----------------CC-----
Confidence 455689999999986 78899999999999999888864 4556665555432211 11
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEE
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v 223 (274)
.+-.-+..+|.+.+++++|+|++.-..+--+.|+++-
T Consensus 189 -----~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~ 225 (262)
T KOG1605|consen 189 -----NYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIK 225 (262)
T ss_pred -----cEEEEcceeccCcccEEEEcCChHHhccCccCCCccc
Confidence 1111125567788999999999998888778888753
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.90 E-value=0.3 Score=42.14 Aligned_cols=29 Identities=21% Similarity=0.196 Sum_probs=19.9
Q ss_pred ccEEEEecCCCccCC-----chhHHHHHHHHHHH
Q 024023 21 YECLLFDLDDTLYPL-----STGFNLACRRNIEE 49 (274)
Q Consensus 21 ~k~viFDlDGTL~d~-----~~~~~~~~~~~~~~ 49 (274)
-.+|+||+||||++. ...+.....+++..
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~ 47 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQL 47 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHH
Confidence 358899999999973 34455555555544
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=90.08 E-value=8.1 Score=32.83 Aligned_cols=135 Identities=12% Similarity=0.169 Sum_probs=72.7
Q ss_pred hhHHHHHHhC---CCcEEEEeC---CChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 109 PVLRNLLLSM---PQRKIIFTN---ADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 109 ~~~~~~L~~l---~~~~~i~s~---~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
|++.++|+.| |.+++++|| .+...+...++.+|+....+.|+++...... ++.... ..+.....+.
T Consensus 20 ~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~-----~l~~~~---~~~~v~~lg~ 91 (249)
T TIGR01457 20 PEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATAD-----YMNDLK---LEKTVYVIGE 91 (249)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHH-----HHHhcC---CCCEEEEEcC
Confidence 4555555544 688999997 4567788889999998777788887532100 000000 0011111122
Q ss_pred CCHHHHHHHHHHhCCC----CCeEEEEcCCh-hc---HHHH---HHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHH
Q 024023 183 PSLEAIETAIRIANVD----PKKTIFFDDSA-RN---IASA---KAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 251 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~----~~~~i~VGDs~-~D---i~~a---~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~ 251 (274)
+.+...++..|+. ..++|++|... .+ +..| ...|+..++.+.........-.+.....+...++..
T Consensus 92 ---~~l~~~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~ 168 (249)
T TIGR01457 92 ---EGLKEAIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNGDLAIPTERGLLPGNGSLITVLEVA 168 (249)
T ss_pred ---hhHHHHHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECCCCCCCCCCCCCCCcHHHHHHHHHH
Confidence 3467777777753 23566666543 23 2212 135888665544433232333445666777666655
Q ss_pred Hhh
Q 024023 252 WEG 254 (274)
Q Consensus 252 ~~~ 254 (274)
...
T Consensus 169 ~~~ 171 (249)
T TIGR01457 169 TGV 171 (249)
T ss_pred hCC
Confidence 433
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.71 E-value=1.1 Score=44.32 Aligned_cols=132 Identities=11% Similarity=0.069 Sum_probs=73.8
Q ss_pred ChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccce--eEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 108 DPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 108 ~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
.||+++.++.| |+.+-.+|+.+..-++.+....|+...=+. .+-+.++... .++-.+.++ +.......
T Consensus 649 RPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~--s~ee~~~i~-----pkl~VlAR 721 (1034)
T KOG0204|consen 649 RPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFREL--SQEERDKIW-----PKLRVLAR 721 (1034)
T ss_pred CCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhc--CHHHHHhhh-----hhheeeec
Confidence 47777776666 688999999999999999999987643332 2222222210 000001111 11111112
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEE-cCChhcHHHHHHcCCeEEEECCCCC--CCCcccccc--CHhHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFF-DDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEA 247 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~V-GDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~--~l~~l~~~ 247 (274)
..|.--..+.+.+. ...++++| ||+.||-.+.++|.++.++--.|.+ ++..|.++- +|..+...
T Consensus 722 SSP~DK~lLVk~L~-~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~ 790 (1034)
T KOG0204|consen 722 SSPNDKHLLVKGLI-KQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKA 790 (1034)
T ss_pred CCCchHHHHHHHHH-hcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHH
Confidence 22222222222222 22345555 9999999999999999987655554 566776653 44444443
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.15 E-value=2 Score=42.56 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=63.8
Q ss_pred ChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCC-CCCCCCCCcccccccCcccccCCCCCHH
Q 024023 108 DPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR-LQPADNTDGIENNSFSSNQRILCKPSLE 186 (274)
Q Consensus 108 ~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~kp~~~ 186 (274)
.|++....+..|++++.+|+..+.-.+...+..|+-. +.--+.++.-.+ -+|.+..+.......+-+......-.++
T Consensus 595 vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~--~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~ 672 (1019)
T KOG0203|consen 595 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIIS--EGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSE 672 (1019)
T ss_pred CchhhhhhhhhCceEEEEecCccchhhhhhhheeeec--CCchhhhhhHHhcCCcccccCccccceEEEecccccccCHH
Confidence 4777777777789999999998888888888777421 111111110000 0011111111112222222222233345
Q ss_pred HHHHHHHHhC-C-----CC-------------CeEE-EEcCChhcHHHHHHcCCeEEEE
Q 024023 187 AIETAIRIAN-V-----DP-------------KKTI-FFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 187 ~~~~~l~~~g-~-----~~-------------~~~i-~VGDs~~Di~~a~~~G~~~v~v 225 (274)
-+.++++... + .| ..++ +.||+.||-.+.+++.++.++-
T Consensus 673 qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMG 731 (1019)
T KOG0203|consen 673 QLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG 731 (1019)
T ss_pred HHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeec
Confidence 5566655432 0 12 2344 5599999999999999999873
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=88.75 E-value=0.19 Score=36.56 Aligned_cols=18 Identities=39% Similarity=0.517 Sum_probs=13.4
Q ss_pred EEEecCCCccCCchhHHH
Q 024023 24 LLFDLDDTLYPLSTGFNL 41 (274)
Q Consensus 24 viFDlDGTL~d~~~~~~~ 41 (274)
++||+||||++....+..
T Consensus 1 ~l~D~dGvl~~g~~~ipg 18 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPG 18 (101)
T ss_dssp EEEESTTTSEETTEE-TT
T ss_pred CEEeCccEeEeCCCcCcC
Confidence 689999999986655544
|
... |
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=87.36 E-value=3 Score=35.63 Aligned_cols=73 Identities=22% Similarity=0.270 Sum_probs=48.0
Q ss_pred CCcEEEEeCCChHHHHHH---HHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHh
Q 024023 119 PQRKIIFTNADQKHAMEV---LGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA 195 (274)
Q Consensus 119 ~~~~~i~s~~~~~~~~~~---l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~ 195 (274)
.++++++|..+....... |+..|+. +|..+.-- |-+|.. +|+.+
T Consensus 186 piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLg---------------------------G~~K~~----vL~~~ 232 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLG---------------------------GLPKGP----VLKAF 232 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhC---------------------------CCchhH----HHHhh
Confidence 488999998655433444 4455554 55544322 244444 44444
Q ss_pred CCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 196 NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 196 g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+- -||++|...-++.|. .+++++.|+.|.
T Consensus 233 ~p----hIFFDDQ~~H~~~a~-~~vps~hVP~gv 261 (264)
T PF06189_consen 233 RP----HIFFDDQDGHLESAS-KVVPSGHVPYGV 261 (264)
T ss_pred CC----CEeecCchhhhhHhh-cCCCEEeccCCc
Confidence 43 489999999999987 888999888764
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.74 E-value=13 Score=31.64 Aligned_cols=133 Identities=9% Similarity=0.044 Sum_probs=69.9
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChH---HHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQK---HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~---~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
++|++.++++.| |.+++++||.+.. .....++.+|+.---+.++++-..... +... .. .+.....
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~-----~L~~--~~--~~~v~~~ 88 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATAD-----FLRR--QE--GKKAYVI 88 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHH-----HHHh--CC--CCEEEEE
Confidence 456777776655 6889999997664 445566677875445667766321100 0000 00 0001111
Q ss_pred CCCCHHHHHHHHHHhCCC----CCeEEEEcCChh-cHHHHH------HcCCeEEEECCCCCCCCccccccCHhHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVD----PKKTIFFDDSAR-NIASAK------AAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~----~~~~i~VGDs~~-Di~~a~------~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~ 249 (274)
+. ..+...++..|+. ..+++++|...+ +..... ..|...++.+..... + -...+...+...++
T Consensus 89 g~---~~l~~~l~~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n~D~~~--~-g~~~~~G~~~~~l~ 162 (248)
T PRK10444 89 GE---GALIHELYKAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHG--R-GFYPACGALCAGIE 162 (248)
T ss_pred cC---HHHHHHHHHCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC--C-CCcCcHHHHHHHHH
Confidence 12 3455666666654 235788887664 332222 348777766544321 1 23455666666666
Q ss_pred HHHhh
Q 024023 250 EIWEG 254 (274)
Q Consensus 250 ~~~~~ 254 (274)
++.+.
T Consensus 163 ~~~g~ 167 (248)
T PRK10444 163 KISGR 167 (248)
T ss_pred HHhCC
Confidence 65543
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.72 E-value=1.9 Score=36.61 Aligned_cols=93 Identities=13% Similarity=0.003 Sum_probs=49.8
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEec----ccCCCCCCCCCCCCcccccccCcccccC--CCCC
Q 024023 111 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF----ETINPRLQPADNTDGIENNSFSSNQRIL--CKPS 184 (274)
Q Consensus 111 ~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~kp~ 184 (274)
..++|+...+++.|+|.+--..+..+++.......+..+++. ++.+.. .-+++.... +|.
T Consensus 146 ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l-------------~gF~~~Lihtfnkn- 211 (298)
T KOG3128|consen 146 FFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNL-------------CGFSQPLIHTFNKN- 211 (298)
T ss_pred HHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchh-------------hhhhHHHHHHHccc-
Confidence 334455557999999999988888887664433222222221 111110 001111111 111
Q ss_pred HHHHHHHHHHhCC--CCCeEEEEcCChhcHHHHHH
Q 024023 185 LEAIETAIRIANV--DPKKTIFFDDSARNIASAKA 217 (274)
Q Consensus 185 ~~~~~~~l~~~g~--~~~~~i~VGDs~~Di~~a~~ 217 (274)
...++...+.+.. ...++++-|||.-|+.||..
T Consensus 212 ~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~g 246 (298)
T KOG3128|consen 212 SSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADG 246 (298)
T ss_pred hHHHHhhhHHHhhccCCceEEEeccccccchhhcC
Confidence 1233333444433 45789999999999999754
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=85.03 E-value=0.52 Score=39.99 Aligned_cols=15 Identities=33% Similarity=0.527 Sum_probs=12.8
Q ss_pred CccEEEEecCCCccC
Q 024023 20 NYECLLFDLDDTLYP 34 (274)
Q Consensus 20 ~~k~viFDlDGTL~d 34 (274)
+..+++||+||||++
T Consensus 2 ~~~~l~lD~DGTL~~ 16 (244)
T TIGR00685 2 RKRAFFFDYDGTLSE 16 (244)
T ss_pred CcEEEEEecCccccC
Confidence 346899999999996
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=85.01 E-value=1.2 Score=45.18 Aligned_cols=36 Identities=17% Similarity=0.357 Sum_probs=27.8
Q ss_pred CCChhHHHHHHhC----CCcEEEEeCCChHHHHHHHHHcC
Q 024023 106 KPDPVLRNLLLSM----PQRKIIFTNADQKHAMEVLGRLG 141 (274)
Q Consensus 106 ~~~~~~~~~L~~l----~~~~~i~s~~~~~~~~~~l~~~g 141 (274)
.+.|++.++|+.| +..++|+|+.+...+...+...+
T Consensus 622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 4667777777777 46799999999998888876543
|
|
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.50 E-value=4.5 Score=36.41 Aligned_cols=44 Identities=14% Similarity=0.018 Sum_probs=37.1
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECC
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~ 227 (274)
.|...|+++.+++|- ....++|||+.-.-.+|++..|++.-+..
T Consensus 409 GKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI~~ 452 (468)
T KOG3107|consen 409 GKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRISS 452 (468)
T ss_pred cHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEeecc
Confidence 347899999999998 46678899998888899999999876654
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=82.92 E-value=2.1 Score=42.86 Aligned_cols=78 Identities=6% Similarity=-0.106 Sum_probs=56.2
Q ss_pred CCCCHHHHHHHHHHh------CCCCCeEEEEcCCh-hcHHHHHHcCCeE------------------------------E
Q 024023 181 CKPSLEAIETAIRIA------NVDPKKTIFFDDSA-RNIASAKAAGLHT------------------------------V 223 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~------g~~~~~~i~VGDs~-~Di~~a~~~G~~~------------------------------v 223 (274)
+..|+.+++.+++++ +..++-++++||.. .|=.|.+..+-.. +
T Consensus 676 gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (797)
T PLN03063 676 GVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYF 755 (797)
T ss_pred CCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceE
Confidence 346678888888876 33567799999976 4877777654211 2
Q ss_pred EECCCCCCCCccccccCHhHHHHHHHHHHhhcccc
Q 024023 224 IVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQ 258 (274)
Q Consensus 224 ~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~~~~~~ 258 (274)
.|.-|.....|.|.+++..++.++|..+.....+.
T Consensus 756 ~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~~~~~~ 790 (797)
T PLN03063 756 SCAIGQARTKARYVLDSSNDVVSLLHKLAVANTTM 790 (797)
T ss_pred EEEECCCCccCeecCCCHHHHHHHHHHHhccCccc
Confidence 33344456789999999999999999988765443
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=80.83 E-value=1.3 Score=39.94 Aligned_cols=30 Identities=20% Similarity=0.270 Sum_probs=20.2
Q ss_pred CccEEEEecCCCcc---C-Cch-hHHHHHHHHHHH
Q 024023 20 NYECLLFDLDDTLY---P-LST-GFNLACRRNIEE 49 (274)
Q Consensus 20 ~~k~viFDlDGTL~---d-~~~-~~~~~~~~~~~~ 49 (274)
+..++++|+||||+ + ... .+.....+++.+
T Consensus 110 k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~ 144 (366)
T PLN03017 110 KQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKK 144 (366)
T ss_pred CCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHH
Confidence 34678889999999 3 333 466666666555
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 274 | ||||
| 3nuq_A | 282 | Structure Of A Putative Nucleotide Phosphatase From | 3e-17 | ||
| 3onn_A | 263 | Crystal Structure Of 5'-Nucleotidase Sdt1 From Sacc | 3e-17 | ||
| 3opx_A | 263 | Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt | 3e-16 |
| >pdb|3NUQ|A Chain A, Structure Of A Putative Nucleotide Phosphatase From Saccharomyces Cerevisiae Length = 282 | Back alignment and structure |
|
| >pdb|3ONN|A Chain A, Crystal Structure Of 5'-Nucleotidase Sdt1 From Saccharomyces Cerevisiae Length = 263 | Back alignment and structure |
|
| >pdb|3OPX|A Chain A, Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt1 From Saccharomyces Cerevisiae Complexed With Uridine 5'-Monophosphate Length = 263 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282 | Back alignment and structure |
|---|
Score = 168 bits (425), Expect = 5e-51
Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 34/265 (12%)
Query: 2 GSLGPALKMDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESE 61
+ + D N + FD+D+ LY ST + +++I F HL + +
Sbjct: 38 SKVTFPIDQDISATPQNPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPED 97
Query: 62 VPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYE-KLKPDPVLRNLLLSMPQ 120
+ Y+E+G + G + ++ + E++ V LP + LKPD LRN+LL + Q
Sbjct: 98 AHVLNNSYYKEYGLAIRG-LVMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQ 156
Query: 121 -----RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 175
+ +FTNA + HA+ L LG+ D F+G+ +
Sbjct: 157 SGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTD----------------- 199
Query: 176 NQRILCKPSLEAIETAIRIANVDPKKT-IFFDDSARNIASAKAAGLHTVIVGSSVPV--- 231
++CKP ++A E A++ + + + F DDS +NI + G+ T I V
Sbjct: 200 --TLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEI 257
Query: 232 ----PPADHALNSIHNIKEAIPEIW 252
P ++ I + + +++
Sbjct: 258 LGQTPEGAIVISDILELPHVVSDLF 282
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 3e-21
Identities = 56/260 (21%), Positives = 101/260 (38%), Gaps = 39/260 (15%)
Query: 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG- 79
+ + FDLDDTL S +A + IE + L +D +EL +E+G+
Sbjct: 2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYH 61
Query: 80 ----LKAVGYEFDNDEFHAFVHG--KLPYEKLKPDPVLRNLLLSMPQRKI---IFTNADQ 130
L+ + ++ A V + L+ P R +L+ + + I T+ +
Sbjct: 62 FDYLLRRLDLPYNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNP 121
Query: 131 KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190
E + RL L+D FE +I + G++ KP + +
Sbjct: 122 VKQWEKILRLELDDFFEHVIISDFE-----------GVK------------KPHPKIFKK 158
Query: 191 AIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV----GSSVPVPPADHALNSIHNIK 245
A++ NV P++ + D + I AK G+ TV S + +A I N++
Sbjct: 159 ALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLE 218
Query: 246 EAIPEIWEGEGEQLEQVIQP 265
+ E+ E ++V P
Sbjct: 219 S-LLEVLARESSSNKKVHPP 237
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 83.5 bits (206), Expect = 3e-19
Identities = 34/278 (12%), Positives = 78/278 (28%), Gaps = 58/278 (20%)
Query: 10 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 69
M + + + + FD DDTL+ + A E +S +L + +S + + L +
Sbjct: 2 MTPIAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEAD-FEAILSGYLDLGDSRMQQHLLAV 60
Query: 70 ----YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYE-----------KLKPDPVLRNL 114
+ G G+ E + A + + ++ +R
Sbjct: 61 ERRNLKIFGYGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREA 120
Query: 115 LLSMPQ--RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 172
+ ++ ++ T D H + + + GL D F I
Sbjct: 121 VAAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVVS------------------- 161
Query: 173 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGS---- 227
+ + + ++ ++ + +S ++ A G +
Sbjct: 162 ---------EKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTW 212
Query: 228 ---SVPVPPADHA----LNSIHNIKEAIPEIWEGEGEQ 258
AD + A+ + G Q
Sbjct: 213 AHEQDHGVAADEPRLREVPDPSGWPAAVRALDAQAGRQ 250
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 2e-16
Identities = 53/249 (21%), Positives = 75/249 (30%), Gaps = 42/249 (16%)
Query: 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEF---MSQHLHIDESEVPRMCLELYREHGTT 76
Y LLFD+DDT+ LA R E+ ++ + + + + E T
Sbjct: 6 RYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMT 65
Query: 77 M---------AGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLL--LSMPQRKIIF 125
A LK GYE D L E + +L+ L I
Sbjct: 66 RDEVVNTRFSALLKEYGYEADGALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQFDLYIV 124
Query: 126 TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 185
TN + L GL F+ I E G + KP
Sbjct: 125 TNGVSHTQYKRLRDSGLFPFFKDIFVSEDT-----------GFQ------------KPMK 161
Query: 186 EAIETAI-RIANVDPKKTIFFDDSARN-IASAKAAGLHTV-IVGSSVPVPPADHALNSIH 242
E RI + T+ DS I + AGL T + P P I
Sbjct: 162 EYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR 221
Query: 243 NIKEAIPEI 251
++E + I
Sbjct: 222 KLEE-LYHI 229
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 74.5 bits (183), Expect = 7e-16
Identities = 40/275 (14%), Positives = 86/275 (31%), Gaps = 64/275 (23%)
Query: 6 PALKMDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVP-- 63
M + FDLD+TL + I+ S++ + +E+E+
Sbjct: 9 HHHHMGLS------RVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICD 62
Query: 64 ----RMCLELYREHGTTMAG---------LKAVGYEFDNDE-----FHAFVHGKLPYEKL 105
++ E + + T + ++ DN + + + +L + L
Sbjct: 63 KVQVKLSKECFHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMIL 122
Query: 106 KPD--PVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQ 160
D +L L ++++ + TN D++ E + + F+ I+
Sbjct: 123 ADDVKAMLTEL-----RKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQ----- 172
Query: 161 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAG 219
E KP+ + V P + D+ I AG
Sbjct: 173 ------KEE------------KPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAG 214
Query: 220 LHTVI---VGSSVPVPPADHALNSIHNIKEAIPEI 251
L + VP+ + + ++ E +P +
Sbjct: 215 LKATVWINKSGRVPLTSSPMPHYMVSSVLE-LPAL 248
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 3e-15
Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 36/209 (17%)
Query: 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL 80
+ L +D+ L L+ G++ R ++ + EL T L
Sbjct: 4 IKALFWDIGGVL--LTNGWDREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYL 61
Query: 81 KAV----GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQR-KI-IFTNADQKHAM 134
+ V +F ++F A + E+ +P P + L + QR ++ N +
Sbjct: 62 EQVVFYQPRDFTPEDFRAVME-----EQSQPRPEVLALARDLGQRYRMYSLNNEGRDLNE 116
Query: 135 EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRI 194
+ GL + S+ + KP+ + +
Sbjct: 117 YRIRTFGLGEFLLAFFT-----------------------SSALGVMKPNPAMYRLGLTL 153
Query: 195 ANVDPKKTIFFDDSARNIASAKAAGLHTV 223
A V P++ + DD +N+ +A+A G+H V
Sbjct: 154 AQVRPEEAVMVDDRLQNVQAARAVGMHAV 182
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 69.8 bits (171), Expect = 2e-14
Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 44/254 (17%)
Query: 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEF--MSQHLHIDESEVPRMCLELYREHGTT 76
+ + FD+ +TL L+ + + + + + EV ++ +
Sbjct: 2 REVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASED 61
Query: 77 -----MAGLKAVGYEFDNDE---FHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IF 125
+A+ + D A L ++ + L + +R + +
Sbjct: 62 PRKVLTGSQEALAGKLKVDVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVI 121
Query: 126 TNAD---QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182
N + +L R GL + + + + K
Sbjct: 122 GNVMFWPGSYTRLLLERFGLMEFIDKTFFADEV-----------LSY------------K 158
Query: 183 PSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV----GSSVPVPPADHA 237
P E E + V P++++ D+ A+ G+ V + +
Sbjct: 159 PRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFE 218
Query: 238 LNSIHNIKEAIPEI 251
+ SI N+K+ I I
Sbjct: 219 IPSIANLKDVIELI 232
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 2e-14
Identities = 42/258 (16%), Positives = 87/258 (33%), Gaps = 54/258 (20%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDE-----SEVPRMCLELYREHGTTMA 78
+ FD TL + + E L+ ++ R Y
Sbjct: 5 VFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPL 64
Query: 79 G----------LKAVGYEFDNDEFHAFVHGKLPYEKLKPD--PVLRNLLLSMPQRKI--- 123
+ G+++ + + + Y +L P+ VL++L + K
Sbjct: 65 RDILEEVMRKLAEKYGFKYPENFWEISLRMSQRYGELYPEVVEVLKSL-----KGKYHVG 119
Query: 124 IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183
+ T++D + AM L LG++D F+ I E G KP
Sbjct: 120 MITDSDTEQAMAFLDALGIKDLFDSITTSEEA-----------GFF------------KP 156
Query: 184 SLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV-GSSVPVPPADHALNSI 241
E A++ A V ++ ++ D+ +K G+ ++++ D +
Sbjct: 157 HPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV 216
Query: 242 HNIKEAIPEI---WEGEG 256
+++E + +I G+G
Sbjct: 217 SDLRE-VIKIVDELNGQG 233
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 3e-13
Identities = 45/257 (17%), Positives = 81/257 (31%), Gaps = 54/257 (21%)
Query: 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTM-- 77
Y+ L FDLDDT++ S +++ LY+ T +
Sbjct: 4 KYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHY----YTLYQRRNTELWL 59
Query: 78 ------------------AGLKAVGYEFD--NDEFHAFVHGKLPYEKLKPDPVLRNLL-- 115
L+AVG E + + F +P K P + +L
Sbjct: 60 EYGEGKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIP-TKSGLMPHAKEVLEY 118
Query: 116 LSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 175
L+ I +N ++ + G++ F+ II E + G+
Sbjct: 119 LAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDL-----------GVL------ 161
Query: 176 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIVGSSVPVPPA 234
KP E A+ + ++++ DS I A G+H +
Sbjct: 162 ------KPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFP 215
Query: 235 DHALNSIHNIKEAIPEI 251
IH++KE + +
Sbjct: 216 FQPTYHIHSLKE-LMNL 231
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 7e-13
Identities = 34/256 (13%), Positives = 73/256 (28%), Gaps = 54/256 (21%)
Query: 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDE-------SEVPRMCLELYRE 72
+ + FD DDTL+ F ++ + + + E +E+ + + Y
Sbjct: 7 LIKVIAFDADDTLWSNEPFFQEVEKQ-YTDLLKPYGTSKEISAALFQTEMNNLQILGYGA 65
Query: 73 HGTTM----AGLKAVGYEFDNDE----FHAFVHGKLPYEKLKPD--PVLRNLLLSMPQRK 122
T+ L+ + D +L P L+ L + +
Sbjct: 66 KAFTISMVETALQISNGKIAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKL 125
Query: 123 IIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182
++ T D L R GL F+ I
Sbjct: 126 VVATKGDLLDQENKLERSGLSPYFDHIEVMS----------------------------D 157
Query: 183 PSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV------GSSVPVPPAD 235
+ + + I + P + + +S ++ I + G + V + V A
Sbjct: 158 KTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAH 217
Query: 236 HALNSIHNIKEAIPEI 251
L + + + + +
Sbjct: 218 ERLKQVKRLDD-LLSL 232
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 1e-12
Identities = 32/265 (12%), Positives = 74/265 (27%), Gaps = 60/265 (22%)
Query: 17 TAANYECLLFDLD----DTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYRE 72
+ +FDLD D++Y + A +++ + + +R+
Sbjct: 2 SLRPQTSFIFDLDGTLTDSVYQNVAAWKEALDA-------ENIPLAMWRI-------HRK 47
Query: 73 HGTTMAG-----LKAVGYEFDNDEFHAFVHGKLPY-----EKLKPDPVLRNLLLSMPQRK 122
G + + G +++ ++ P LL ++ +
Sbjct: 48 IGMSGGLMLKSLSRETGMSITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKEN 107
Query: 123 I---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179
+ I T+ A L L L+ I+ + ++
Sbjct: 108 LKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYG--------------------- 146
Query: 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP------ 233
KP + A + + + D+ ++ +A+ V + S
Sbjct: 147 --KPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAG 204
Query: 234 ADHALNSIHNIKEAIPEIWEGEGEQ 258
A ++ + EI EG
Sbjct: 205 ALRVYEDPLDLLNHLDEIASREGHH 229
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 1e-12
Identities = 30/246 (12%), Positives = 65/246 (26%), Gaps = 46/246 (18%)
Query: 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQH-LHIDESEVPRMCLELYR-------- 71
Y+ +L D +TL GF + + + + +D +V R +
Sbjct: 3 YKAVLVDFGNTLV----GFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDED 58
Query: 72 --EHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IFT 126
EH L +G + + L + + +
Sbjct: 59 GLEHVDPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVS 118
Query: 127 NADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLE 186
NA +L + L+ F+ + I KP+ +
Sbjct: 119 NASP-RVKTLLEKFDLKKYFDALALSYEI-----------KAV------------KPNPK 154
Query: 187 AIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK 245
A+ + D AK + + +++ P + ++
Sbjct: 155 IFGFALAKVGYP---AVHVGDIYELDYIGAKRSYVDPILLDRYDFYPDVRDRVKNLREAL 211
Query: 246 EAIPEI 251
+ I E+
Sbjct: 212 QKIEEM 217
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 2e-12
Identities = 43/272 (15%), Positives = 82/272 (30%), Gaps = 64/272 (23%)
Query: 23 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQH-LHIDESEVPRMCLELYREHGTT----- 76
L +D+ DTL H L ++ S + + + YR +
Sbjct: 3 LLTWDVKDTLLR----LRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYG 58
Query: 77 ---------------MAGLKAVGY---EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM 118
+ G + + + L
Sbjct: 59 LSHGLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLREC 118
Query: 119 PQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 175
R + + +N D+ +LG LGL + F+ ++ E G
Sbjct: 119 RTRGLRLAVISNFDR-RLEGILGGLGLREHFDFVLTSEAA-----------GWP------ 160
Query: 176 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIVGSSVPVPP- 233
KP + A+R+A+++P D+ +A G+H+ +V + P
Sbjct: 161 ------KPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPV 214
Query: 234 ------ADHALNSIHNIKEAIPEIWEGEGEQL 259
+H L S+ ++ A+ + EG E L
Sbjct: 215 VRDSVPKEHILPSLAHLLPAL-DCLEGSAENL 245
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 4e-12
Identities = 38/222 (17%), Positives = 71/222 (31%), Gaps = 56/222 (25%)
Query: 24 LLFDLDDTLYPLSTGFNLACRR-------NIEEFMSQHLH-----------IDESEVPRM 65
++FDL L L+ + RR +IEE + +L E E
Sbjct: 8 IVFDLGGVLIHLN--REESIRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEEE---- 61
Query: 66 CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQ--RKI 123
+ +G E + + + G L + + S+ R
Sbjct: 62 FRTELSRY---------IGKELTYQQVYDALLGFLEE----ISAEKFDYIDSLRPDYRLF 108
Query: 124 IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183
+ +N + + L F+ + ++S Q KP
Sbjct: 109 LLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKV-----------------YASCQMGKYKP 151
Query: 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225
+ + I + + P++T+F DD N+A+A+ G HT
Sbjct: 152 NEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCP 193
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 5e-12
Identities = 46/234 (19%), Positives = 69/234 (29%), Gaps = 51/234 (21%)
Query: 8 LKMDTMGRTTAANYECLLFDLDDTLYPLS-----TGFNLACRRNIEEFMSQHLH------ 56
L +M + LL DL L L F +NIEE H
Sbjct: 18 LYFQSMKSK---GIKNLLIDLGGVLINLDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQ 74
Query: 57 -----IDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVL 111
I +E + RE +G + + A + L + +
Sbjct: 75 QEKGLITPAE----FRDGIREM---------MGKMVSDKQIDAAWNSFLV--DIPTYKLD 119
Query: 112 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 171
L L + +N + H V F+ FE
Sbjct: 120 LLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKT---------------- 163
Query: 172 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225
+ S + + KP E + A +DPK+T F DDS N A+ G+ T
Sbjct: 164 -YLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTP 216
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 2e-11
Identities = 22/136 (16%), Positives = 39/136 (28%), Gaps = 26/136 (19%)
Query: 106 KPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 162
+ RNLL + + + I +N + L + ++
Sbjct: 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLL----------- 66
Query: 163 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 222
S + + KP A + A ++ + + DDS N+ A AGL
Sbjct: 67 ------------SGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVG 114
Query: 223 VIVGSSVPVPPADHAL 238
V L
Sbjct: 115 VYYQQFDRAVVEIVGL 130
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 2e-11
Identities = 38/268 (14%), Positives = 81/268 (30%), Gaps = 77/268 (28%)
Query: 21 YECLLFDLD----DTLYPLSTGFNLACRRN-----------------IEEFMSQHLHIDE 59
Y +LFDLD D+ ++ + + ++ ++ + DE
Sbjct: 4 YNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFMEYYNFDE 63
Query: 60 SEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP 119
++ YR++ ++ F Y+ ++ LL S+
Sbjct: 64 ETATVA-IDYYRDY-----------FK-AKGMFENK-----VYDGIEA------LLSSLK 99
Query: 120 QRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 176
+ T+ + ++L L F+ I+
Sbjct: 100 DYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKL------------------ 141
Query: 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV----GSSVPVP 232
+ I A+ N+ I D ++ A L ++ V GS +
Sbjct: 142 -----STKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELK 196
Query: 233 P--ADHALNSIHNIKEAIPEIWEGEGEQ 258
A++ +NS+ + + I E+ EG
Sbjct: 197 NAGANYIVNSVDELHKKILELREGHHHH 224
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 5e-11
Identities = 37/230 (16%), Positives = 66/230 (28%), Gaps = 70/230 (30%)
Query: 20 NYECLLFDLD----DTLYPLSTGFNLACRRN-----------------IEEFMSQHLHID 58
Y LFD D D+ + T F R+ +EE S I
Sbjct: 5 KYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTGIT 64
Query: 59 ESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM 118
+++ + Y + + + + P L +
Sbjct: 65 DADQLESFRQEYSKE-----------ADIYMNANTI------LFPDTLP------TLTHL 101
Query: 119 PQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 175
++ I I + + + L +D F+ II E +
Sbjct: 102 KKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHH----------------- 144
Query: 176 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225
KP E + AI P++ ++ DS + +A AAG+ V
Sbjct: 145 ------KPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGV 188
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 8e-11
Identities = 36/259 (13%), Positives = 82/259 (31%), Gaps = 56/259 (21%)
Query: 19 ANYECLLFDLDDTLY---PLSTGFNLACRRNIEEFMSQH-LHIDESEV---------PRM 65
+ ++ ++FD D L + + +++ I E+ +
Sbjct: 2 SGFDLIIFDCDGVLVDSEII-------AAQVESRLLTEAGYPISVEEMGERFAGMTWKNI 54
Query: 66 CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIF 125
L++ E ++ D+ + +L +K ++ L + + I
Sbjct: 55 LLQVESEASIPLS------ASLL-DKSEKLLDMRLE-RDVKIIDGVKFALSRLTTPRCIC 106
Query: 126 TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 185
+N+ +L ++GL+ F I + G + KP
Sbjct: 107 SNSSSHRLDMMLTKVGLKPYFAPHIY----------SAKDLGADRV----------KPKP 146
Query: 186 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADH-------AL 238
+ V P + + +DS I A+AAG+ + + P+ A
Sbjct: 147 DIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAE 206
Query: 239 NSIHNIKEAIPEIWEGEGE 257
I +++ +P + E
Sbjct: 207 TVISRMQD-LPAVIAAMAE 224
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 9e-11
Identities = 39/260 (15%), Positives = 77/260 (29%), Gaps = 26/260 (10%)
Query: 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTT--- 76
N + L LD+ + + +EEF + LH+ ++ + + L+
Sbjct: 129 NEQLPLQFLDNVKVGKNNIY-----AALEEFATTELHVSDATLFSLKGALWTLAQEVYQE 183
Query: 77 -MAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQRKI---IFTNADQK 131
G K F G + E L+P ++ LL + I T
Sbjct: 184 WYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYT 243
Query: 132 HAMEVLGRLGLEDCFEG---IICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAI 188
+ LGL FE + + + N FS + +
Sbjct: 244 ETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYE 303
Query: 189 ETAI-RIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP---------ADHAL 238
+ V+ DS ++ SA+ G + + + AD+ +
Sbjct: 304 SYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI 363
Query: 239 NSIHNIKEAIPEIWEGEGEQ 258
N + ++ + + E
Sbjct: 364 NHLGELRGVLDNLLEHHHHH 383
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 1e-10
Identities = 34/186 (18%), Positives = 60/186 (32%), Gaps = 37/186 (19%)
Query: 80 LKAVGYEFDNDEFHAFVHGKLPY-----EKLKPDPVL---RNLLLSMPQRKI---IFTNA 128
L + +EF K + + P V LL + KI + + +
Sbjct: 57 LDLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS 116
Query: 129 DQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAI 188
K+ +L R+ L F+ I PA+ KP+ +
Sbjct: 117 --KNGPFLLERMNLTGYFDAIAD---------PAEVAAS--------------KPAPDIF 151
Query: 189 ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK-EA 247
A V P ++I +DS I + K +G + VG + + + E
Sbjct: 152 IAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEF 211
Query: 248 IPEIWE 253
+ E+W
Sbjct: 212 LKEVWL 217
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 2e-10
Identities = 38/257 (14%), Positives = 76/257 (29%), Gaps = 47/257 (18%)
Query: 5 GPALKMDTMGRTTAANYECLLFDLD----DTLYPLSTGFNLACRRNIEEFMSQHLHIDES 60
L+ T G + ++FD DT + +
Sbjct: 9 MGTLEAQTQGPGSMKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMG------------ 56
Query: 61 EVPRMCLELYREHGTTMAGLKAVGYEFDN--DEFHAFVHGKLPYEKLKPDPVLRNLLLSM 118
+ L+ + +G + + + + + LL ++
Sbjct: 57 -YKNIDLDSIPNSTIPKYLITLLGKRWKEATILYENSLEKSQKSDNFMLNDGAIELLDTL 115
Query: 119 PQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 175
+ I I +N + + + L F+ II
Sbjct: 116 KENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTI----------------- 158
Query: 176 NQRILCKPSLEAIETAIRIANVDPKK-TIFFDDSARNIASAKAAGLHTVIVGSSVPVPPA 234
KPS E + A+ N++P K F DS +I SA AG + GS+ +
Sbjct: 159 ------KPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNIIKD- 211
Query: 235 DHALNSIHNIKEAIPEI 251
+ + ++I+ I ++
Sbjct: 212 ILSFKNFYDIRNFICQL 228
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 3e-10
Identities = 28/224 (12%), Positives = 61/224 (27%), Gaps = 64/224 (28%)
Query: 24 LLFDLDDTLYPLSTGFNLACRR-------NIEEFMSQHLH-----------IDESEVPRM 65
+FDL + + + FN + I +
Sbjct: 10 YIFDLGNVIVDID--FNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAF--- 64
Query: 66 CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI-- 123
E + ++F + P + ++ + ++
Sbjct: 65 -AEALCHE---------MALPLSYEQFSHGWQAVF----VALRPEVIAIMHKLREQGHRV 110
Query: 124 -IFTNADQKHAMEVLGRL-GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181
+ +N ++ H + D + I S + +
Sbjct: 111 VVLSNTNRLHTTFWPEEYPEIRDAADHIY----------------------LSQDLG-MR 147
Query: 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225
KP + ++ P T+FFDD+A NI A G+ +++V
Sbjct: 148 KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 191
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209 | Back alignment and structure |
|---|
Score = 55.6 bits (135), Expect = 1e-09
Identities = 33/250 (13%), Positives = 65/250 (26%), Gaps = 65/250 (26%)
Query: 20 NYECLLFDLD----DTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREH-G 74
Y+ L+FD+D ++ +T P + +
Sbjct: 3 TYQALMFDIDGTLTNSQPAYTTVMREVLATY--------------GKPFSPAQAQKTFPM 48
Query: 75 TTMAGLKAVGYEFDNDEFHAFV-----HGKLPYEKLKP----DPVLRNLLLSMPQRKI-- 123
+ +G EF F Y++++ + L ++
Sbjct: 49 AAEQAMTELG--IAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQL-----PSELRL 101
Query: 124 -IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182
I T+ + + I + R K
Sbjct: 102 GIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKR-----------------------K 138
Query: 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV----GSSVPVPPADHAL 238
P + TA+ NV P+ +F DS + +A+AA + + + H
Sbjct: 139 PDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF 198
Query: 239 NSIHNIKEAI 248
+I E
Sbjct: 199 QKPLDILELF 208
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 2e-09
Identities = 28/235 (11%), Positives = 64/235 (27%), Gaps = 76/235 (32%)
Query: 10 MDTMGRTTAANYECLLFDLD----DTLYPLSTGFNLAC------------RRNIEEFMSQ 53
M M Y ++DL D + F + ++
Sbjct: 1 MKGM------KYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPF 54
Query: 54 HLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRN 113
+ + LE Y+E+ + + F + +
Sbjct: 55 AIETFAPNLENF-LEKYKEN-----------EARELEHPILF-------------EGVSD 89
Query: 114 LLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 170
LL + + + ++ + +E+L + + F ++ + R
Sbjct: 90 LLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFKR------------ 136
Query: 171 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225
KP+ E++ + + D +I + +AAGL T +
Sbjct: 137 -----------KPNPESMLYLREKYQISS--GLVIGDRPIDIEAGQAAGLDTHLF 178
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 4e-09
Identities = 36/230 (15%), Positives = 68/230 (29%), Gaps = 71/230 (30%)
Query: 20 NYECLLFDLD----DTLYPLSTGFNLACRRN----------------IEEFMSQHLHIDE 59
NYE +LFDLD D ++ + + + ++ ++
Sbjct: 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGPPLHDTFKEYYKFED 87
Query: 60 SEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP 119
+ +E YRE+ + D F Y ++ +L +
Sbjct: 88 KKAKEA-VEKYREY-----------FA-DKGIFEN-----KIY------ENMKEILEMLY 123
Query: 120 QRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 176
+ + T+ A +L ++ F+ I R
Sbjct: 124 KNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTR------------------ 165
Query: 177 QRILCKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIV 225
E I+ + + NV D K I D +I AK G+ ++ V
Sbjct: 166 -----VNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGV 210
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 6e-09
Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 49/218 (22%)
Query: 20 NYECLLFDLD----DTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREH-G 74
+ +LFDLD D+ ++ + + + ++ G
Sbjct: 2 SLRVILFDLDGTLIDSAKDIALALEKTLKEL--------------GLEEYYPDNVTKYIG 47
Query: 75 TTMAGL--KAVGYEFDNDEFHAFVH--GKLPYEKLKPDPVLRNLLLSMPQRKI---IFTN 127
+ L K + +F + F + P KP P + L ++ + + +N
Sbjct: 48 GGVRALLEKVLKDKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSN 107
Query: 128 ADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEA 187
++ + ++L L L F+ I+ +T + KPS
Sbjct: 108 KLEELSKKILDILNLSGYFDLIVGGDTFGEK-----------------------KPSPTP 144
Query: 188 IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225
+ + I +P+K + D+ +I + K AG T +
Sbjct: 145 VLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALA 182
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 6e-09
Identities = 44/282 (15%), Positives = 88/282 (31%), Gaps = 63/282 (22%)
Query: 6 PALKMDTMGRTTAANYECLLFDLDDTLY---PLSTGFNLACRRNIEEFMSQHLHIDESEV 62
+ M + + LFD+D T+ P +F + D V
Sbjct: 20 QTIAMPLTTKPLSLKINAALFDVDGTIIISQPAI-------AAFWRDFGKDKPYFDAEHV 72
Query: 63 PRMCLELYREHG-TTMAGLKAVGYEFDNDEFHAFVHGKLPY---EKLKPDPVLRNLLLSM 118
++ HG T + +F ++E+ + G++P E P L ++
Sbjct: 73 ------IHISHGWRTYDAIAKFAPDFADEEYVNKLEGEIPEKYGEHSIEVPGAVKLCNAL 126
Query: 119 PQRKI----IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFS 174
+ T+ + A + L ++ E I D G
Sbjct: 127 NALPKEKWAVATSGTRDMAKKWFDILKIKR-PEYFITAN---------DVKQG------- 169
Query: 175 SNQRILCKPS-------LEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 227
KP + I + K + F+D+ IA+ KAAG V + +
Sbjct: 170 -------KPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIAT 222
Query: 228 SVPVPP-----ADHALNSIHNIKEAIPEIWEGEGEQLEQVIQ 264
+ + D + + +I+ + E +++E +
Sbjct: 223 TFDLDFLKEKGCDIIVKNHESIR---VGEYNAETDEVELIFD 261
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 8e-09
Identities = 31/230 (13%), Positives = 67/230 (29%), Gaps = 73/230 (31%)
Query: 20 NYECLLFDLD----DTLYPLSTGFNLACRRN-----------------IEEFMSQHLHID 58
++DLD D+ + +G + +++ + + D
Sbjct: 3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLL-VRVAED 61
Query: 59 ESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM 118
+ + L R ++ P R +L
Sbjct: 62 RNLDVEV-LNQVRAQ-----------------------SLAEKNAQVVLMPGAREVLAWA 97
Query: 119 PQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 175
+ I I+T+ +A +L LG+E F I+ ++ R
Sbjct: 98 DESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVR----------------- 139
Query: 176 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225
KPS EA + ++ T + D ++ A+ +G+ ++
Sbjct: 140 ------KPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF 183
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 8e-09
Identities = 21/131 (16%), Positives = 41/131 (31%), Gaps = 29/131 (22%)
Query: 124 IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183
+ TN KH +L G++ F ++ +++ KP
Sbjct: 135 VVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEI-----------------------KP 171
Query: 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV------GSSVPVPPADHA 237
+ PK+ +F DS +I +A +AG V + + D
Sbjct: 172 HPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWI 231
Query: 238 LNSIHNIKEAI 248
+ +I +
Sbjct: 232 FDDFADILKIT 242
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 9e-09
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 24/124 (19%)
Query: 131 KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190
++A ++L RL + D F I+ P G KP + T
Sbjct: 118 RNAPKILRRLAIIDDFHAIVD---------PTTLAKG--------------KPDPDIFLT 154
Query: 191 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK-EAIP 249
A + +V P +D+ I++ K+AG+ V VG P+ AD + ++ E +
Sbjct: 155 AAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPMLGADLVVRQTSDLTLELLH 214
Query: 250 EIWE 253
E WE
Sbjct: 215 EEWE 218
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 53.4 bits (128), Expect = 1e-08
Identities = 28/221 (12%), Positives = 57/221 (25%), Gaps = 56/221 (25%)
Query: 24 LLFDLDDTLYPLSTGFNLACRR---NIEEFMSQ---------------HLHIDESEVPRM 65
+FD TL + + + E H + D ++
Sbjct: 17 CVFDAYGTLLDVHSAVMRNADEVGASAEALSMLWRQRQLEYSWTRTLMHQYADFWQLTDE 76
Query: 66 CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI-- 123
L + + D + Y++L P L +
Sbjct: 77 ALT------FALRTYHLEDRKGLKDRLMSA------YKELSAYPDAAETLEKLKSAGYIV 124
Query: 124 -IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182
I +N + + L L+ + + + + + K
Sbjct: 125 AILSNGNDEMLQAALKASKLDRVLDSCLSADDLK-----------------------IYK 161
Query: 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 223
P + A V+P + F +A ++ A G +TV
Sbjct: 162 PDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTV 202
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 3e-08
Identities = 32/258 (12%), Positives = 71/258 (27%), Gaps = 53/258 (20%)
Query: 24 LLFDLDDTLYPLSTGFNLACR---RNIEEFMSQ---------------HLHIDESEVPRM 65
+ FDL TL+ + + E + + +++ +
Sbjct: 7 IAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATED 66
Query: 66 CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIF 125
L T L P+ ++ L + I
Sbjct: 67 ALR------FTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSL---RELKRRGLKLAIL 117
Query: 126 TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 185
+N + V+ GL D F+ ++ + + KP
Sbjct: 118 SNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVY-----------------------KPDN 154
Query: 186 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV--GSSVPVPPADHALNSIHN 243
E A + +D +F +A + A+ G T + +V + +
Sbjct: 155 RVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS 214
Query: 244 IKEAIPEIWEGEGEQLEQ 261
++ + E++E + E+
Sbjct: 215 LRA-VVELFETAAGKAEK 231
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 3e-08
Identities = 36/263 (13%), Positives = 70/263 (26%), Gaps = 51/263 (19%)
Query: 10 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 69
MD M E ++F T + G +E F + + I E + L
Sbjct: 1 MDRM------KIEAVIFAWAGTT--VDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLL 52
Query: 70 YREHGTTMAGLKAV--------GYEFDNDEFHAFVHGKLPY------EKLKPDPVLRNLL 115
+H + + + + P ++ ++
Sbjct: 53 KIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVI 112
Query: 116 LSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 172
S+ +R I T ++ V L+ + P D G
Sbjct: 113 ASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLV--------TPDDVPAG----- 159
Query: 173 FSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIV---GSS 228
+P V P I D+ ++ + AG+ TV V S
Sbjct: 160 ---------RPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSE 210
Query: 229 VPVPPADHALNSIHNIKEAIPEI 251
+ + + ++E I +
Sbjct: 211 LGLTEEEVENMDSVELREKIEVV 233
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 7e-08
Identities = 27/197 (13%), Positives = 59/197 (29%), Gaps = 37/197 (18%)
Query: 80 LKAVGYEFDNDEFHAFVHGKL-PYEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHA-- 133
+ +G + + H L Y ++ + L + Q I +N
Sbjct: 7 IWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEV 66
Query: 134 -MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAI 192
VL G+ D F+ I + +E KP + +
Sbjct: 67 IKRVLTNFGIIDYFDFIYASNSELQPG-------KME------------KPDKTIFDFTL 107
Query: 193 RIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV----------GSSVPVPPADHALNSI 241
+D + + ++ + I A AG+H + + + PP + +
Sbjct: 108 NALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDL 167
Query: 242 HNIKEAIPEIWEGEGEQ 258
++ EA+ + +
Sbjct: 168 ADVPEALLLLKKISEGH 184
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 7e-08
Identities = 37/220 (16%), Positives = 63/220 (28%), Gaps = 56/220 (25%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNI----EEFMSQ---------------HLHIDESEVPR 64
++FD TL+ + + + A R E + D V R
Sbjct: 5 VVFDAYGTLFDVQSVAD-ATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTR 63
Query: 65 MCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDP-VLRNLLLSMPQRKI 123
L L +G E D Y +L P P + L P ++
Sbjct: 64 EALA--------YT-LGTLGLEPDESFLADMAQA---YNRLTPYPDAAQCLAELAPLKRA 111
Query: 124 IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183
I +N ++ GL D F+ +I + F KP
Sbjct: 112 ILSNGAPDMLQALVANAGLTDSFDAVISVDAKR---------------VF--------KP 148
Query: 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 223
++ + V P + +F + ++ AK G
Sbjct: 149 HPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVA 188
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 8e-08
Identities = 39/258 (15%), Positives = 82/258 (31%), Gaps = 60/258 (23%)
Query: 2 GSLGPALKMDTMGRTTAAN--YECLLFDLD----DTLYPLSTGFNLACRRNIEEFMSQH- 54
S G L + + + + ++ +LFDLD ++ + + +++
Sbjct: 7 HSSGVDLGTENLYFQSMPDAPFDAVLFDLDGVLVESEG--------IIAQVWQSVLAERG 58
Query: 55 LHIDESEV---------PRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKL 105
LH+D +E+ + L ++H E F+A + G +
Sbjct: 59 LHLDLTEIAMYFTGQRFDGVLAYLAQQHDFVPPPDFLDVLE---TRFNAAMTG------V 109
Query: 106 KPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 162
L ++ + I +N+++ L GL + I
Sbjct: 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHI------------ 157
Query: 163 DNTDGIENNSFSSNQRILC-KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 221
+ + KP + A + + P++ + +DS A+ AAG
Sbjct: 158 ----------YDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGAT 207
Query: 222 TV-IVGSSVPVPPADHAL 238
++ P P AL
Sbjct: 208 LWGLLVPGHPHPDGAAAL 225
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 2e-07
Identities = 20/126 (15%), Positives = 47/126 (37%), Gaps = 26/126 (20%)
Query: 126 TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 185
+++ + L L+ F+ ++ + + + KP+
Sbjct: 112 SSSVKADIFRALEENRLQGFFDIVLS----------GEE---FKES----------KPNP 148
Query: 186 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP---ADHALNSIH 242
E TA++ NV + + +DS + IA+ AA + + + A L+S+
Sbjct: 149 EIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLT 208
Query: 243 NIKEAI 248
++ + I
Sbjct: 209 DVLDLI 214
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 3e-07
Identities = 39/260 (15%), Positives = 81/260 (31%), Gaps = 53/260 (20%)
Query: 20 NYECLLFDLDDTLY---PLST--GFNLACRRNI---EEFMSQHLHIDESEVPRMCLELYR 71
+ + +LFD+D L+ P + R E H + + R
Sbjct: 22 DLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRER 81
Query: 72 EHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IFTNA 128
H T +KA+ +EF+ K P + P +L + + + T +
Sbjct: 82 GHDATEEEIKAIYQAK-TEEFN-----KCPKAERMPG--ALEVLTKIKSEGLTPMVVTGS 133
Query: 129 DQKHAMEVLG-RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEA 187
Q ++ L ++ + + KP+ E
Sbjct: 134 GQTSLLDRLNHNFPGIFQANLMVTAFDV-------------KYG----------KPNPEP 170
Query: 188 IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP------ADHALNSI 241
A++ P + + +++ + + AAG+ T+ V + A+ +S+
Sbjct: 171 YLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSM 230
Query: 242 HNIKEAIPEIWEGEGEQLEQ 261
+ WE L+Q
Sbjct: 231 ----PDFNKNWETLQSALKQ 246
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 4e-07
Identities = 17/131 (12%), Positives = 45/131 (34%), Gaps = 30/131 (22%)
Query: 124 IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183
+ +N + ++ L F+ + ++ R KP
Sbjct: 131 VVSNKPNEAVQVLVEEL-FPGSFDFALGEKSGIRR-----------------------KP 166
Query: 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV------GSSVPVPPADHA 237
+ + +++ V K ++ DS +I +A+ + + + V + A
Sbjct: 167 APDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVI 226
Query: 238 LNSIHNIKEAI 248
+++ ++EAI
Sbjct: 227 VDTAEKLEEAI 237
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 4e-07
Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 26/130 (20%)
Query: 131 KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190
+A +L L L + F + + KP E
Sbjct: 121 LNAPTILAALELREFFTFCAD---------ASQLKNS--------------KPDPEIFLA 157
Query: 191 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK-EAIP 249
A V P+ I +D+ I + A+G+ +V +G+ + A L S ++ +
Sbjct: 158 ACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGA--GLTGAQLLLPSTESLTWPRLS 215
Query: 250 EIWEGEGEQL 259
W+ E L
Sbjct: 216 AFWQNVAENL 225
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 4e-07
Identities = 33/256 (12%), Positives = 80/256 (31%), Gaps = 49/256 (19%)
Query: 14 GRTTAANYECLLFDLDDTLY---PLST--GFNLACRRNI---EEFMSQHLHIDESEVPRM 65
G + +LFD+D L+ P + + + E H + +
Sbjct: 17 GSHMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINI 76
Query: 66 CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI-- 123
+ T ++++ +E + F+ P + P LL + +
Sbjct: 77 VFQRELGKEATQEEIESIYHEK-SILFN-----SYPEAERMPG--AWELLQKVKSEGLTP 128
Query: 124 -IFTNADQKHAME-VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181
+ T + Q +E + E ++ A + ++
Sbjct: 129 MVVTGSGQLSLLERLEHNFPGMFHKELMVT----------AFD---VKYG---------- 165
Query: 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP------AD 235
KP+ E A++ + + + +++ + + AG+ T+ V + AD
Sbjct: 166 KPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGAD 225
Query: 236 HALNSIHNIKEAIPEI 251
S+ + ++ I
Sbjct: 226 LLFPSMQTLCDSWDTI 241
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 5e-07
Identities = 36/221 (16%), Positives = 62/221 (28%), Gaps = 45/221 (20%)
Query: 20 NYECLLFDLDDTLYPLSTGFNLACRR---------NIEEFMSQHLHIDESEVPRMCLELY 70
+++ L FD TL TG A + +E + + + LY
Sbjct: 5 DFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALY 64
Query: 71 RE--HGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI--IFT 126
++ K G E D E F + P L + + I +
Sbjct: 65 QDILRAVYDRIAKEWGLEPDAAEREEFGTS---VKNWPAFPDTVEALQYLKKHYKLVILS 121
Query: 127 NADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS-- 184
N D L L F+ I ++ KP+
Sbjct: 122 NID--RNEFKLSNAKLGVEFDHI-----------------------ITAQDVGSYKPNPN 156
Query: 185 -LEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTV 223
+ A+ A ++ K + +S + A AGL +
Sbjct: 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSA 197
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 7e-07
Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 28/124 (22%)
Query: 126 TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 185
+ + +VL L D F+ + + + + KP
Sbjct: 117 SASPLHMLEKVLTMFDLRDSFDALAS-------------AEKLPYS----------KPHP 153
Query: 186 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP-----ADHALNS 240
+ VDP + +DS + ++KAA + +++V + A+ L+S
Sbjct: 154 QVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS 213
Query: 241 IHNI 244
+ +
Sbjct: 214 LTEL 217
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 47.9 bits (113), Expect = 1e-06
Identities = 32/231 (13%), Positives = 66/231 (28%), Gaps = 26/231 (11%)
Query: 16 TTAANYECLLFDLDDTLYPLS----TGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYR 71
+ A +L D++ T P++ F N++E++ H +E E + L +
Sbjct: 5 SVPAEVTVILLDIEGTTTPIAFVKDILFPYI-EENVKEYLQTH--WEEEECQQDVSLLRK 61
Query: 72 EHG----TTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---- 123
+ A D+ + + + + L Q +
Sbjct: 62 QAEEDAHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAA 121
Query: 124 -------IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD--GIENNSFS 174
AD A+ G++ E + D + + F
Sbjct: 122 FTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFD 181
Query: 175 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225
+ K E+ +F D R ++A+ A +H +V
Sbjct: 182 TKIGH--KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVV 230
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 46.6 bits (110), Expect = 2e-06
Identities = 30/203 (14%), Positives = 54/203 (26%), Gaps = 68/203 (33%)
Query: 23 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA 82
+FDLD TL+P ++ + + + R LY E + L++
Sbjct: 29 LAVFDLDYTLWPFWVDTHV--DPPFHKSSDGTVRDRRGQDVR----LYPEVPEVLKRLQS 82
Query: 83 VGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGL 142
+G + R ++ + A ++L L
Sbjct: 83 LGV-----------------------------PGAAASR-----TSEIEGANQLLELFDL 108
Query: 143 EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKT 202
F I P + E + + +
Sbjct: 109 FRYF----VHREIYP------------------------GSKITHFERLQQKTGIPFSQM 140
Query: 203 IFFDDSARNIASAKAAGLHTVIV 225
IFFDD RNI G+ + +
Sbjct: 141 IFFDDERRNIVDVSKLGVTCIHI 163
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 2e-06
Identities = 32/234 (13%), Positives = 68/234 (29%), Gaps = 84/234 (35%)
Query: 20 NYECLLFDLD----DTLYPLSTGFNLACRRN-----------------IEEFMSQHLHID 58
+ + FDLD D+ + F + +E + L
Sbjct: 3 SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCL--S 60
Query: 59 ESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPY-------EKLKPDPVL 111
+ ++ +++YR + Y+ + A + E+L
Sbjct: 61 KDQISEA-VQIYRSY-----------YK-AKGIYEA-----QLFPQIIDLLEELS----- 97
Query: 112 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 171
+ L I T D A ++ L + F+GI P
Sbjct: 98 SSYPLY------ITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPH------------- 138
Query: 172 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225
K + I A++ + P++ I D+ ++ A+ G+ + +
Sbjct: 139 ----------KA--DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAI 180
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 2e-06
Identities = 37/204 (18%), Positives = 69/204 (33%), Gaps = 44/204 (21%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHL---HIDESEVPRMCLELYREHGTTMAGL 80
L FD+ T+ ST + +E + +++ E+ ++ L L
Sbjct: 4 LAFDIFGTVLDTSTVIQEFRNKQLEYTWLLTIMGKYVEFEEITKITLR--------YI-L 54
Query: 81 KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLL-LSMPQRKIIFTNADQKHAMEVLGR 139
K G E DE ++ LK + L +S +N + L R
Sbjct: 55 KVRGEESKFDEELNK------WKNLKAYEDTKYLKEISEIAEVYALSNGSINEVKQHLER 108
Query: 140 LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP 199
GL F+GI E++ KPS + + + ++
Sbjct: 109 NGLLRYFKGIFSAESVK-----------------------EYKPSPKVYKYFLD--SIGA 143
Query: 200 KKTIFFDDSARNIASAKAAGLHTV 223
K+ +A ++ AK AG+ ++
Sbjct: 144 KEAFLVSSNAFDVIGAKNAGMRSI 167
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 6e-06
Identities = 37/248 (14%), Positives = 61/248 (24%), Gaps = 46/248 (18%)
Query: 10 MDTMGRTTAANYECLLFDLD----DT--LYPLSTGFNLACRRNIE---EFMSQHLHIDES 60
M A E L+ D D L P+ L + IE + + ++S
Sbjct: 3 MLKANVFCAGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKS 62
Query: 61 EVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPY------EKLKPDPVLRNL 114
E R L R A L G + ++ P ++ + P + +
Sbjct: 63 EHIRRMLGNSR---IANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEV 119
Query: 115 LLSMPQRKI---IFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIEN 170
+ + I T L + + +
Sbjct: 120 FDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRG------------ 167
Query: 171 NSFSSNQRILCKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229
+P + V I DD+ I AG+ TV V S
Sbjct: 168 -----------RPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSG 216
Query: 230 PVPPADHA 237
D
Sbjct: 217 NEVGLDRE 224
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 7e-06
Identities = 39/244 (15%), Positives = 71/244 (29%), Gaps = 60/244 (24%)
Query: 17 TAANYECLLFDLDDTLYPLSTGFNLACRRN-----IEEFMSQHLHIDESEVPRMCLELYR 71
+ + + +FD+D TL + A R E+ + HL ++
Sbjct: 2 SLSEIKHWVFDMDGTL--TIAVHDFAAIREALSIPAEDDILTHLAALPADESAAKHAWLL 59
Query: 72 EHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IFTNA 128
EH +A + +P P L+ + R I T
Sbjct: 60 EHERDLA------------------------QGSRPAPGAVELVRELAGRGYRLGILTRN 95
Query: 129 DQKHAMEVLGRLGLEDCFEG-IICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEA 187
++ A L +GL DCF + P KP
Sbjct: 96 ARELAHVTLEAIGLADCFAEADVLGRDEAPP-----------------------KPHPGG 132
Query: 188 IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV--GSSVPVPPADHALNSIHNIK 245
+ +V P + + D ++ +AAG TV+V + D ++
Sbjct: 133 LLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARDCAQLR 192
Query: 246 EAIP 249
+ +
Sbjct: 193 DLLS 196
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 7e-06
Identities = 27/221 (12%), Positives = 58/221 (26%), Gaps = 38/221 (17%)
Query: 20 NYECLLFDLD----DTLYPLSTGFNLACRR-----NIEEFMSQHLHIDESEVPRMCLELY 70
+ +LFD+D A +D + + + +
Sbjct: 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVG 62
Query: 71 REHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIF----T 126
E + + A + E + +R LL ++ R + T
Sbjct: 63 LERAEIADKFDKAK-----ETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLT 117
Query: 127 NADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLE 186
+ L G++ F + R + +LE
Sbjct: 118 GNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPH-------------------IALE 158
Query: 187 AIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 227
+ AN P + + D+ +I A+ ++ V +
Sbjct: 159 RAR-RMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVAT 198
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 2e-05
Identities = 36/268 (13%), Positives = 78/268 (29%), Gaps = 76/268 (28%)
Query: 39 FNLACRRN---IEEFMSQHLHID----------ESEVPRMCLELYREHGTTMAGLKAVGY 85
F + +++F+ + L I+ E P M +Y E +
Sbjct: 68 FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN------ 121
Query: 86 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM-PQRKIIFTNADQKHAM---------- 134
DN F K +L+P LR LL + P + ++ +
Sbjct: 122 --DNQVF-----AKYNVSRLQPYLKLRQALLELRPAKNVLI------DGVLGSGKTWVAL 168
Query: 135 EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN--NSFSSNQRILCKPS------LE 186
+V ++ + I + + P + ++ N S +
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 187 AIETAIR--------------IANVDPKKTI-FFDDSARNIASAKAAGLHTVIVGSSVPV 231
+I+ +R + NV K F+ S + + + + + + ++
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTH 288
Query: 232 PPADHALNSIHNIKEAIPEIWEGEGEQL 259
DH ++ E + L
Sbjct: 289 ISLDHHSMTLT----------PDEVKSL 306
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 3e-05
Identities = 29/217 (13%), Positives = 61/217 (28%), Gaps = 65/217 (29%)
Query: 22 ECLLFDLDDTLYP-LSTGFNLACR-----RNI---------------------------- 47
CLL L + FNL+C+ R
Sbjct: 245 NCLL-VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 48 EEFMSQHLHIDESEVPR-----------MCLELYREHGTTMAGLKAVGYEFDNDEFHAFV 96
+ + ++L ++PR + E R+ T K V D+ +
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC----DKLTTII 359
Query: 97 HGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFE 153
+ L+P R + + +F +L + ++ ++ +
Sbjct: 360 --ESSLNVLEPA-EYRKMFDRL----SVF-PPSAHIPTILLSLIWFDVIKSDVMVVVN-K 410
Query: 154 TINPRL---QPADNTDGIENNSFSSNQRILCKPSLEA 187
L QP ++T I + ++ + +L
Sbjct: 411 LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHR 447
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253 | Back alignment and structure |
|---|
Score = 41.3 bits (96), Expect = 1e-04
Identities = 7/44 (15%), Positives = 17/44 (38%)
Query: 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225
K ++ +R + +F D+ + +A G+ T +
Sbjct: 187 KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLA 230
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 3e-04
Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 36/185 (19%)
Query: 80 LKAVGYEFDNDEFHAFVHGKLP--YEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHAM 134
+ + +E KL + P L++ + + I + T++
Sbjct: 84 IDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFD 143
Query: 135 EVLGRL-GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 193
R F I+ D+ + +++ KP + +
Sbjct: 144 MKTSRHKEFFSLFSHIVL----------GDDPE-VQHG----------KPDPDIFLACAK 182
Query: 194 IANVDP--KKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP----ADHALNSIHNIKEA 247
+ P +K + F+D+ + +A AAG+ V+V A LNS+ + +
Sbjct: 183 RFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQ-- 240
Query: 248 IPEIW 252
PE++
Sbjct: 241 -PELF 244
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231 | Back alignment and structure |
|---|
Score = 39.4 bits (91), Expect = 6e-04
Identities = 29/172 (16%), Positives = 50/172 (29%), Gaps = 19/172 (11%)
Query: 14 GRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREH 73
T + LFD D+TL + M + + + + L E
Sbjct: 4 ATTATPHDIVFLFDCDNTLL----DNDHVLADLRAHMMREFGAQNSARYWEIFETLRTEL 59
Query: 74 G--TTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPD--PVLRNLL--LSMPQRKIIFTN 127
G + L+ E D + L P N L L +I ++
Sbjct: 60 GYADYLGALQRYRLEQPRDTRLLLMSSFLIDYPFASRVYPGALNALRHLGARGPTVILSD 119
Query: 128 ADQKHAMEVLGRLGLEDCFEGIIC--------FETINPRLQPADNTDGIENN 171
D + R GL D EG + + + PA + +++
Sbjct: 120 GDVVFQPRKIARSGLWDEVEGRVLIYIHKELMLDQVMECY-PARHYVMVDDK 170
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 274 | |||
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.96 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.96 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.96 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.96 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.95 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.95 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.95 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.95 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.95 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.95 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.95 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.95 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.95 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.95 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.95 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.95 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.95 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.95 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.95 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.94 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.94 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.94 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.94 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.94 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.94 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.94 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.94 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.94 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.94 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.94 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.94 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.94 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.94 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.94 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.94 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.94 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.93 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.93 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.93 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.93 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.93 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.93 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.93 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.93 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.92 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.92 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.92 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.92 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.92 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.92 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.91 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.91 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.9 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.9 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.9 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.9 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.89 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.89 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.89 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.89 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.88 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.87 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.86 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.86 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.85 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.85 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.84 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.83 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.82 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.82 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.82 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.81 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.81 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.81 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.81 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.8 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.8 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.79 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.79 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.79 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.78 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.78 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.77 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.77 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.77 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.77 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.75 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.75 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.74 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.74 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.72 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.72 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.72 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.72 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.71 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.71 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.71 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.71 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.71 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.71 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.71 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.7 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.7 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.69 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.69 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.68 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.67 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.67 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.65 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.64 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.63 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.6 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.59 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.57 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.57 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.34 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.55 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.55 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.53 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.48 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.48 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.48 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.46 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.46 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.36 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.31 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.31 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.3 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.3 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.29 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.29 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.27 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.22 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.19 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.18 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.15 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.94 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.91 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.86 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.84 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.83 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.64 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.41 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.41 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.26 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 98.21 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.09 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.08 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 98.05 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.01 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 97.9 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.7 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.63 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.5 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.5 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.31 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 97.26 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.9 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.76 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.63 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 96.4 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.15 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.66 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 95.61 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 95.11 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 94.53 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 93.42 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 92.84 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 86.29 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 85.29 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 81.03 |
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-29 Score=205.31 Aligned_cols=197 Identities=26% Similarity=0.318 Sum_probs=147.0
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH-----HHHHhcCCCChHHHHHH
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFHAF 95 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 95 (274)
+|+|+||+||||+|+.+.+..++.+ +++.+|.+.... ......+.... ...........+.+.+.
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYRR-----VAESYGKPYTED-----LHRRIMGVPEREGLPILMEALEIKDSLENFKKR 70 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHH-----HHHHTTCCCCHH-----HHHHHTTSCHHHHHHHHHHHTTCCSCHHHHHHH
T ss_pred CeEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHH-----HHHHHhccchhhhhhhhhhcccchhhHHHHHHH
Confidence 5899999999999988888777764 666777765431 11222233221 12223333333333322
Q ss_pred HhccC---CCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccc
Q 024023 96 VHGKL---PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 169 (274)
Q Consensus 96 ~~~~~---~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~ 169 (274)
+.... ......++||+.++|+.| +.+++++||++...+...++.+|+.++||.++++++++..
T Consensus 71 ~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~----------- 139 (216)
T 3kbb_A 71 VHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNG----------- 139 (216)
T ss_dssp HHHHHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSC-----------
T ss_pred HHHHHHHHHHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCC-----------
Confidence 21111 123457889999988877 6899999999999999999999999999999999999875
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEE-ECCCCC------CCCccccccCHh
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI-VGSSVP------VPPADHALNSIH 242 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~-v~~~~~------~~~a~~~~~~l~ 242 (274)
||+|+++..+++++|++|++|++|||+.+|+.+|+++|+++|+ +.++.. ..++ .++.+..
T Consensus 140 ------------KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~-~~i~~~~ 206 (216)
T 3kbb_A 140 ------------KPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGA-VALVKPE 206 (216)
T ss_dssp ------------TTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTC-SEEECGG
T ss_pred ------------cccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCC-cEECCHH
Confidence 9999999999999999999999999999999999999999986 666654 2233 4455778
Q ss_pred HHHHHHHHH
Q 024023 243 NIKEAIPEI 251 (274)
Q Consensus 243 ~l~~~l~~~ 251 (274)
++.+.|+++
T Consensus 207 eli~~l~eL 215 (216)
T 3kbb_A 207 EILNVLKEV 215 (216)
T ss_dssp GHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888888765
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-29 Score=210.58 Aligned_cols=200 Identities=22% Similarity=0.286 Sum_probs=143.2
Q ss_pred CCCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHH----------HHHHHHHHHhcCcHHHHHHhcCC
Q 024023 17 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVP----------RMCLELYREHGTTMAGLKAVGYE 86 (274)
Q Consensus 17 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 86 (274)
...|+|+|+||+||||+|+...+..++.+ +++++|++..... .....+...... ...
T Consensus 22 ~~~MIKaViFDlDGTLvDs~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--------~~~ 88 (250)
T 4gib_A 22 SNAMIEAFIFDLDGVITDTAYYHYMAWRK-----LAHKVGIDIDTKFNESLKGISRMESLDRILEFGNK--------KYS 88 (250)
T ss_dssp --CCCCEEEECTBTTTBCCHHHHHHHHHH-----HHHTTTCCCCTTGGGGTTTCCHHHHHHHHHHHTTC--------TTT
T ss_pred ccchhheeeecCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHHHHhCcchHHHHHHhhhhhcC--------CCC
Confidence 34579999999999999988777776664 5666776543211 011111111111 011
Q ss_pred CChHH-------HHHHHhccC-CCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccC
Q 024023 87 FDNDE-------FHAFVHGKL-PYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETI 155 (274)
Q Consensus 87 ~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~L~~l~---~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~ 155 (274)
..... ....+.... ......++|++.++++.|+ .++++.|+. ......++.+|+.++||.+++++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~--~~~~~~L~~~gl~~~Fd~i~~~~~~ 166 (250)
T 4gib_A 89 FSEEEKVRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSAS--KNAINVLNHLGISDKFDFIADAGKC 166 (250)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHHTCGGGCSEECCGGGC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHhccccccccccc--chhhhHhhhcccccccceeeccccc
Confidence 11111 111111111 1234568899999988873 666665554 3456789999999999999999998
Q ss_pred CCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCcc
Q 024023 156 NPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPAD 235 (274)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~ 235 (274)
+.. ||+|+++..+++++|++|++|++|||+.+|+.+|+++|+.+|++++......|+
T Consensus 167 ~~~-----------------------KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ad 223 (250)
T 4gib_A 167 KNN-----------------------KPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENLKKAN 223 (250)
T ss_dssp CSC-----------------------TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTTTTSS
T ss_pred CCC-----------------------CCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHhccCC
Confidence 875 999999999999999999999999999999999999999999998887778899
Q ss_pred ccccCHhHH-HHHHHHHHhh
Q 024023 236 HALNSIHNI-KEAIPEIWEG 254 (274)
Q Consensus 236 ~~~~~l~~l-~~~l~~~~~~ 254 (274)
++++++.+| .+.|++.+..
T Consensus 224 ~vi~~l~eL~~~~i~~~~n~ 243 (250)
T 4gib_A 224 LVVDSTNQLKFEYIQEKYNE 243 (250)
T ss_dssp EEESSGGGCCHHHHHHHHHH
T ss_pred EEECChHhCCHHHHHHHHHH
Confidence 999999999 5777766643
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-28 Score=203.86 Aligned_cols=206 Identities=16% Similarity=0.246 Sum_probs=153.4
Q ss_pred CCCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH-----HH-HHhcCCCChH
Q 024023 17 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GL-KAVGYEFDND 90 (274)
Q Consensus 17 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~ 90 (274)
.|+++|+|+||+||||+++...+...+.+ .++..|.+..... .....+.... .+ ...+...+.+
T Consensus 19 ~~~~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 88 (247)
T 3dv9_A 19 ESIDLKAVLFDMDGVLFDSMPNHAESWHK-----IMKRFGFGLSREE-----AYMHEGRTGASTINIVSRRERGHDATEE 88 (247)
T ss_dssp SCCCCCEEEEESBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHH-----HHHTTTSCHHHHHHHHHHHHHSSCCCHH
T ss_pred CCCCCCEEEECCCCccCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhCCChHHHHHHHHHHhcCCCCCHH
Confidence 45678999999999999988887777765 4455666543211 1111222211 11 1133344444
Q ss_pred HHHHHHhcc----CCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc--ceeEecccCCCCCCC
Q 024023 91 EFHAFVHGK----LPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQP 161 (274)
Q Consensus 91 ~~~~~~~~~----~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~~~~ 161 (274)
.+...+... .......++|++.++|+.+ +.+++++|+++...+...++. |+..+| +.++++++++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~--- 164 (247)
T 3dv9_A 89 EIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYG--- 164 (247)
T ss_dssp HHHHHHHHHHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSC---
T ss_pred HHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCC---
Confidence 433322111 1123467889999998877 589999999999988888988 999999 889999988764
Q ss_pred CCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCcc
Q 024023 162 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPAD 235 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~ 235 (274)
||+|+++..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...++
T Consensus 165 --------------------kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad 224 (247)
T 3dv9_A 165 --------------------KPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGAN 224 (247)
T ss_dssp --------------------TTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCS
T ss_pred --------------------CCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999988764 34899
Q ss_pred ccccCHhHHHHHHHHHHhhcc
Q 024023 236 HALNSIHNIKEAIPEIWEGEG 256 (274)
Q Consensus 236 ~~~~~l~~l~~~l~~~~~~~~ 256 (274)
++++++.+|.++|+.+....+
T Consensus 225 ~v~~~~~el~~~l~~~~~~~~ 245 (247)
T 3dv9_A 225 LLFHSMPDFNKNWETLQSALK 245 (247)
T ss_dssp EEESSHHHHHHHHHHHHHHHC
T ss_pred EEECCHHHHHHHHHHHHHHhc
Confidence 999999999999998877543
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-28 Score=200.01 Aligned_cols=196 Identities=16% Similarity=0.190 Sum_probs=142.5
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCC-ChHHHHHHHh
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEF-DNDEFHAFVH 97 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 97 (274)
|++|+|+||+||||+|+...+..++.+ .++++|.+...... +....|............. ..+.+.+.+.
T Consensus 2 M~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIGIHNAFTY-----TFKELGVPSPDAKT----IRGFMGPPLESSFATCLSKDQISEAVQIYR 72 (210)
T ss_dssp TTCCEEEECSBTTTEECHHHHHHHHHH-----HHHHHTCCCCCHHH----HHHTSSSCHHHHHHTTSCGGGHHHHHHHHH
T ss_pred CCCCEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHcCccHHHHHHHHcCHHHHHHHHHHHH
Confidence 468999999999999988877777665 44455654422111 1222233322111111111 1122222211
Q ss_pred cc---CCCCCCCCChhHHHHHHhC--CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccc
Q 024023 98 GK---LPYEKLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 172 (274)
Q Consensus 98 ~~---~~~~~~~~~~~~~~~L~~l--~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~ 172 (274)
.. .......++||+.++|+.| +++++++||++...+...++.+|+..+|+.+++++ +.
T Consensus 73 ~~~~~~~~~~~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~--------------- 135 (210)
T 2ah5_A 73 SYYKAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--PE--------------- 135 (210)
T ss_dssp HHHHHTGGGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--SS---------------
T ss_pred HHHHHhccCCCCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--CC---------------
Confidence 11 1112357889999888766 68899999999999999999999999999999887 44
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHhHHHH
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKE 246 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~~l~~ 246 (274)
+||+|+++..+++++|++|++|++||||.+|+.+|+++|+.++++.++.. ...++++++++.+|.+
T Consensus 136 --------~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~ 207 (210)
T 2ah5_A 136 --------APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp --------CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred --------CCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 39999999999999999999999999999999999999999999988754 2468999999999876
Q ss_pred HH
Q 024023 247 AI 248 (274)
Q Consensus 247 ~l 248 (274)
+|
T Consensus 208 ~l 209 (210)
T 2ah5_A 208 YF 209 (210)
T ss_dssp HT
T ss_pred Hh
Confidence 53
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.95 E-value=7.5e-28 Score=202.59 Aligned_cols=201 Identities=19% Similarity=0.281 Sum_probs=151.1
Q ss_pred CCCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH-----HH-HHhcCCCChH
Q 024023 17 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GL-KAVGYEFDND 90 (274)
Q Consensus 17 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~ 90 (274)
.|+++|+|+||+||||+++...+...+.+ .++..|....... .....+.... .+ ...+.....+
T Consensus 20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (243)
T 3qxg_A 20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQ-----VMKTHGLDLSREE-----AYMHEGRTGASTINIVFQRELGKEATQE 89 (243)
T ss_dssp --CCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHH-----HHHTTTSCHHHHHHHHHHHHHSSCCCHH
T ss_pred ccccCCEEEEcCCCCCCCCHHHHHHHHHH-----HHHHhCCCCCHHH-----HHHHhCCCHHHHHHHHHHHHhCCCCCHH
Confidence 35678999999999999988887777765 4455666643211 1111222111 11 1133344444
Q ss_pred HHHHHHhcc----CCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc--ceeEecccCCCCCCC
Q 024023 91 EFHAFVHGK----LPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQP 161 (274)
Q Consensus 91 ~~~~~~~~~----~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~~~~ 161 (274)
.+...+... .......++|++.++|+.+ +.+++++|+++...+...++. |+..+| +.++++++++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~--- 165 (243)
T 3qxg_A 90 EIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYG--- 165 (243)
T ss_dssp HHHHHHHHHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSC---
T ss_pred HHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCC---
Confidence 433322110 0123467889999998887 589999999999988888988 999999 889999988764
Q ss_pred CCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCcc
Q 024023 162 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPAD 235 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~ 235 (274)
||+++++..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...++
T Consensus 166 --------------------kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad 225 (243)
T 3qxg_A 166 --------------------KPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGAD 225 (243)
T ss_dssp --------------------TTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCS
T ss_pred --------------------CCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999988765 24799
Q ss_pred ccccCHhHHHHHHHHH
Q 024023 236 HALNSIHNIKEAIPEI 251 (274)
Q Consensus 236 ~~~~~l~~l~~~l~~~ 251 (274)
++++++.+|.++|+++
T Consensus 226 ~v~~s~~el~~~l~~l 241 (243)
T 3qxg_A 226 LLFPSMQTLCDSWDTI 241 (243)
T ss_dssp EEESCHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHhh
Confidence 9999999999988876
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-28 Score=204.54 Aligned_cols=202 Identities=18% Similarity=0.231 Sum_probs=139.6
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchH----------HHHHHHHHHHhcCcHHHHHHhcCCC
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEV----------PRMCLELYREHGTTMAGLKAVGYEF 87 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (274)
+|++|+|+||+||||+|+...+..++.+ +++++|++.... ......+....+... ..
T Consensus 2 ~MkiKaViFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~ 68 (243)
T 4g9b_A 2 VMKLQGVIFDLDGVITDTAHLHFQAWQQ-----IAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEG--------DF 68 (243)
T ss_dssp CCCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGG--------GC
T ss_pred CccCcEEEEcCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhccc--------ch
Confidence 4679999999999999988877777664 556666653321 111111122111110 01
Q ss_pred ChHHHH-------HHHhcc-CCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCC
Q 024023 88 DNDEFH-------AFVHGK-LPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETIN 156 (274)
Q Consensus 88 ~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~ 156 (274)
...... ..+... .......++||+.++++.| +.+++++|++.. ....++.+|+.++||.++++++++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~ 146 (243)
T 4g9b_A 69 NSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLK 146 (243)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccccccccccccc
Confidence 111110 011100 0122346789999998877 578888888654 466789999999999999999998
Q ss_pred CCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccc
Q 024023 157 PRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADH 236 (274)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~ 236 (274)
.. ||+|++|..+++++|++|++|++|||+.+|+.+|+++|+.+|+|.++. .+++.
T Consensus 147 ~~-----------------------KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~--~~ad~ 201 (243)
T 4g9b_A 147 NS-----------------------KPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL--TGAQL 201 (243)
T ss_dssp SC-----------------------TTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC--CSCSE
T ss_pred CC-----------------------CCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC--CcHHH
Confidence 75 999999999999999999999999999999999999999999999886 44566
Q ss_pred cccCHhHHH-HHHHHHHhhcccch
Q 024023 237 ALNSIHNIK-EAIPEIWEGEGEQL 259 (274)
Q Consensus 237 ~~~~l~~l~-~~l~~~~~~~~~~~ 259 (274)
.+.+..++. +-|..++..+.+.+
T Consensus 202 ~~~~~~~l~~~~l~~~~~~l~~~l 225 (243)
T 4g9b_A 202 LLPSTESLTWPRLSAFWQNVAENL 225 (243)
T ss_dssp EESSGGGCCHHHHHHHHHHHSCCG
T ss_pred hcCChhhcCHHHHHHHHHHHHHHh
Confidence 666665542 34445555444443
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.95 E-value=7.7e-27 Score=194.73 Aligned_cols=204 Identities=22% Similarity=0.225 Sum_probs=154.4
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHH-----HHHHHHHHhcCc------------HHHH
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPR-----MCLELYREHGTT------------MAGL 80 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~------------~~~~ 80 (274)
||++|+|+||+||||+|+...+...+.+ .+++.|.+...... .....+..+... ...+
T Consensus 4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (238)
T 3ed5_A 4 MKRYRTLLFDVDDTILDFQAAEALALRL-----LFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALL 78 (238)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred cccCCEEEEcCcCcCcCCchhHHHHHHH-----HHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 4578999999999999987777777665 45556766433111 111111111110 1122
Q ss_pred HHhcCCCChHHHHHHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCC
Q 024023 81 KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR 158 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~ 158 (274)
...+.......+...+.... .....++|++.++|+.++ .+++++|+++...+...++.+|+..+|+.++++++.+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~ 157 (238)
T 3ed5_A 79 KEYGYEADGALLEQKYRRFL-EEGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQ 157 (238)
T ss_dssp HHTTCCCCHHHHHHHHHHHH-TTCCCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSC
T ss_pred HHcCCCCcHHHHHHHHHHHH-HhcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCC
Confidence 33444544455544443322 234678999999988874 788999999999999999999999999999999988765
Q ss_pred CCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhC-CCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC----CC
Q 024023 159 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN-VDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VP 232 (274)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g-~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~----~~ 232 (274)
||++.++..+++++| ++|+++++|||+. +|+.+|+++|+++++++++.. ..
T Consensus 158 -----------------------kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~ 214 (238)
T 3ed5_A 158 -----------------------KPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEI 214 (238)
T ss_dssp -----------------------TTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCC
T ss_pred -----------------------CCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccC
Confidence 999999999999999 9999999999998 999999999999999988743 56
Q ss_pred CccccccCHhHHHHHHHH
Q 024023 233 PADHALNSIHNIKEAIPE 250 (274)
Q Consensus 233 ~a~~~~~~l~~l~~~l~~ 250 (274)
.++++++++.+|.++|..
T Consensus 215 ~ad~v~~~~~el~~~l~~ 232 (238)
T 3ed5_A 215 IPTYEIRKLEELYHILNI 232 (238)
T ss_dssp CCSEEESSGGGHHHHHTC
T ss_pred CCCeEECCHHHHHHHHHh
Confidence 799999999999987653
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=198.00 Aligned_cols=203 Identities=17% Similarity=0.197 Sum_probs=148.4
Q ss_pred ccCCCCCccEEEEecCCCccCCchhHHHHH-HHHHHHHHHhhcCCCcchHH-----HHHHHHHHHhcCcHHHHHHhcCCC
Q 024023 14 GRTTAANYECLLFDLDDTLYPLSTGFNLAC-RRNIEEFMSQHLHIDESEVP-----RMCLELYREHGTTMAGLKAVGYEF 87 (274)
Q Consensus 14 ~~~~~~~~k~viFDlDGTL~d~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 87 (274)
+...|+++|+|+||+||||+|+...+...+ .+ ..+..|.+..... .....+....+.....
T Consensus 18 ~~~~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------- 84 (231)
T 3kzx_A 18 GPGSMKQPTAVIFDWYNTLIDTSINIDRTTFYQ-----VLDQMGYKNIDLDSIPNSTIPKYLITLLGKRWKE-------- 84 (231)
T ss_dssp ---CCCCCSEEEECTBTTTEETTSSCCHHHHHH-----HHHHTTCCCCCCTTSCTTTHHHHHHHHHGGGHHH--------
T ss_pred CCCccCCCCEEEECCCCCCcCCchhHHHHHHHH-----HHHHcCCCHHHHHHHhCccHHHHHHHHhCchHHH--------
Confidence 344567899999999999999887777776 54 4444554422111 0111111111211110
Q ss_pred ChHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCC
Q 024023 88 DNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 164 (274)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~ 164 (274)
....+...+..........++|++.++|+.+ +.+++++|+++...+...++.+|+..+|+.++++++.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~------ 158 (231)
T 3kzx_A 85 ATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTI------ 158 (231)
T ss_dssp HHHHHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCC------
T ss_pred HHHHHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCC------
Confidence 0122333333122345678899999998887 5899999999999999999999999999999999988765
Q ss_pred CCcccccccCcccccCCCCCHHHHHHHHHHhCCCCC-eEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhH
Q 024023 165 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK-KTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHN 243 (274)
Q Consensus 165 ~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~-~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~ 243 (274)
||+++++..+++++|++|+ ++++|||+.+|+.+|+++|+.++++.++.. ..+++++.++.+
T Consensus 159 -----------------Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-~~~~~~~~~~~e 220 (231)
T 3kzx_A 159 -----------------KPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-IKDILSFKNFYD 220 (231)
T ss_dssp -----------------TTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC------CCEEESSHHH
T ss_pred -----------------CCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-CCCceeeCCHHH
Confidence 9999999999999999999 999999999999999999999999976554 578899999999
Q ss_pred HHHHHHHHHh
Q 024023 244 IKEAIPEIWE 253 (274)
Q Consensus 244 l~~~l~~~~~ 253 (274)
|.++|.++..
T Consensus 221 l~~~l~~~l~ 230 (231)
T 3kzx_A 221 IRNFICQLIN 230 (231)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9999887653
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.2e-27 Score=201.61 Aligned_cols=214 Identities=27% Similarity=0.503 Sum_probs=169.0
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhc
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHG 98 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (274)
.++|+|+||+||||+++...+.....+++..++....+++..........++..++.....+.. ......+.+...+..
T Consensus 55 ~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~ 133 (282)
T 3nuq_A 55 PNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVM-FHKVNALEYNRLVDD 133 (282)
T ss_dssp CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHH-TTSSCHHHHHHHHTT
T ss_pred CCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHH-HcCCCHHHHHHHHhh
Confidence 4689999999999999999998988888888878888888776666555555556554443332 234456666666555
Q ss_pred cCC-CCCCCCChhHHHHHHhC---CC--cEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccc
Q 024023 99 KLP-YEKLKPDPVLRNLLLSM---PQ--RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 172 (274)
Q Consensus 99 ~~~-~~~~~~~~~~~~~L~~l---~~--~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~ 172 (274)
... .....++|++.++|+.+ +. +++|+||+....+...++.+|+..+|+.+++++..+.
T Consensus 134 ~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~--------------- 198 (282)
T 3nuq_A 134 SLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRT--------------- 198 (282)
T ss_dssp TSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSC---------------
T ss_pred hhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCC---------------
Confidence 332 23578899999998887 57 9999999999999999999999999999998875431
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCC-CeEEEEcCChhcHHHHHHcCCe-EEEECCCCC------CCCccccccCHhHH
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLH-TVIVGSSVP------VPPADHALNSIHNI 244 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~-~~~i~VGDs~~Di~~a~~~G~~-~v~v~~~~~------~~~a~~~~~~l~~l 244 (274)
....+||+++++..+++++|++| +++++|||+.+|+.||+++|++ ++++..+.. ...++++++++.+|
T Consensus 199 ----~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el 274 (282)
T 3nuq_A 199 ----DTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILEL 274 (282)
T ss_dssp ----SSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGG
T ss_pred ----cccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHH
Confidence 01135999999999999999999 9999999999999999999995 555655543 45789999999999
Q ss_pred HHHHHHHH
Q 024023 245 KEAIPEIW 252 (274)
Q Consensus 245 ~~~l~~~~ 252 (274)
.++|+.+|
T Consensus 275 ~~~l~~lf 282 (282)
T 3nuq_A 275 PHVVSDLF 282 (282)
T ss_dssp GGTSGGGC
T ss_pred HHHhhhhC
Confidence 98876653
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.1e-27 Score=193.83 Aligned_cols=201 Identities=18% Similarity=0.239 Sum_probs=149.5
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChH-------H
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDND-------E 91 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 91 (274)
+++|+|+||+||||+|+...+...+.+ .++..|.+...... +....|...............+ .
T Consensus 2 ~m~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (226)
T 3mc1_A 2 SLYNYVLFDLDGTLTDSAEGITKSVKY-----SLNKFDIQVEDLSS----LNKFVGPPLKTSFMEYYNFDEETATVAIDY 72 (226)
T ss_dssp CCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHTTTCCCSCGGG----GGGGSSSCHHHHHHHHHCCCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHhCcCHHHHHHHHhCCCHHHHHHHHHH
Confidence 358999999999999988877777765 45555665321111 1111122211110000011121 1
Q ss_pred HHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcc
Q 024023 92 FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
+.+.+.. .......++|++.++|+.+ +.+++++|++....+...++.+|+..+|+.++++++.+..
T Consensus 73 ~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---------- 141 (226)
T 3mc1_A 73 YRDYFKA-KGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKL---------- 141 (226)
T ss_dssp HHHHHTT-TGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSS----------
T ss_pred HHHHHHH-hCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCC----------
Confidence 2222222 1124567899999999888 4899999999999999999999999999999999988764
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHh
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIH 242 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~ 242 (274)
||++.++..+++++|++|+++++|||+.||+.||+++|+.++++.++.. ...++++++++.
T Consensus 142 -------------kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~ 208 (226)
T 3mc1_A 142 -------------STKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVD 208 (226)
T ss_dssp -------------CSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHH
T ss_pred -------------CCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHH
Confidence 9999999999999999999999999999999999999999999998764 367999999999
Q ss_pred HHHHHHHHHH
Q 024023 243 NIKEAIPEIW 252 (274)
Q Consensus 243 ~l~~~l~~~~ 252 (274)
+|.+++....
T Consensus 209 el~~~~~~~~ 218 (226)
T 3mc1_A 209 ELHKKILELR 218 (226)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHHHHh
Confidence 9999876543
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.2e-27 Score=197.15 Aligned_cols=215 Identities=15% Similarity=0.187 Sum_probs=147.3
Q ss_pred CCCCCcccc-ccccccCCCCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCc---
Q 024023 1 MGSLGPALK-MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTT--- 76 (274)
Q Consensus 1 ~~~~~~~~~-~~~~~~~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--- 76 (274)
|||+.+--+ -+.++....|++|+|+||+||||+|+...+...+.+ .++..|.+....... ..+.......
T Consensus 1 ~~~~~~~~~~~~~~~~~~~m~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~-~~~~~~~~~~~~~ 74 (254)
T 3umc_A 1 MGSSHHHHHHSSGRENLYFQGMRAILFDVFGTLVDWRSSLIEQFQA-----LERELGGTLPCVELT-DRWRQQYKPAMDR 74 (254)
T ss_dssp ----------------CCSSSCCEEEECCBTTTEEHHHHHHHHHHH-----HHHHSSSCCCHHHHH-HHHHHHTHHHHHH
T ss_pred CCccccccccccCCCcccccCCcEEEEeCCCccEecCccHHHHHHH-----HHHHhcCCCCHHHHH-HHHHHHHHHHHHH
Confidence 566654444 233344445679999999999999977777776665 555567654322111 1111100000
Q ss_pred -------------------HHHHHHhcCCCChHHHHHHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHH
Q 024023 77 -------------------MAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAME 135 (274)
Q Consensus 77 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~ 135 (274)
...+...+..........+... +....++|++.++|+.++ .+++++|+.+...+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~ 151 (254)
T 3umc_A 75 VRNGQAPWQHLDQLHRQSLEALAGEFGLALDEALLQRITGF---WHRLRPWPDTLAGMHALKADYWLAALSNGNTALMLD 151 (254)
T ss_dssp HHTTSSCCCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHGG---GGSCEECTTHHHHHHHHTTTSEEEECCSSCHHHHHH
T ss_pred HhcccCCcccHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH---HhcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHH
Confidence 0111223333333333322221 245678899999999885 7889999999999999
Q ss_pred HHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHH
Q 024023 136 VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASA 215 (274)
Q Consensus 136 ~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a 215 (274)
.++.+|+. |+.+++++..+.. ||++.++..+++++|++|+++++|||+.||+.||
T Consensus 152 ~l~~~g~~--f~~~~~~~~~~~~-----------------------kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a 206 (254)
T 3umc_A 152 VARHAGLP--WDMLLCADLFGHY-----------------------KPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAA 206 (254)
T ss_dssp HHHHHTCC--CSEECCHHHHTCC-----------------------TTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHH
T ss_pred HHHHcCCC--cceEEeecccccC-----------------------CCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHH
Confidence 99999986 9999999887764 9999999999999999999999999999999999
Q ss_pred HHcCCeEEEEC----CCCC-------CCCccccccCHhHHHHHHH
Q 024023 216 KAAGLHTVIVG----SSVP-------VPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 216 ~~~G~~~v~v~----~~~~-------~~~a~~~~~~l~~l~~~l~ 249 (274)
+.+|+++++++ ++.. ...|+++++++.+|.++|.
T Consensus 207 ~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 207 RALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp HHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHHH
T ss_pred HHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHhc
Confidence 99999999998 5542 4579999999999998764
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=195.86 Aligned_cols=196 Identities=17% Similarity=0.182 Sum_probs=145.9
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH-----HHHHhcCCCChHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFH 93 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 93 (274)
+|+|+|+||+||||+++...+...+.+ ..+..|.+..... .....+.... .....+.......+.
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKYYYDRRAS-----FLGQKGISIDHLP-----PSFFIGGNTKQVWENILRDEYDKWDVSTLQ 72 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHHHHHHHHH-----HHHHTTCCCTTSC-----HHHHTTSCGGGCHHHHHGGGGGGSCHHHHH
T ss_pred ccccEEEEcCCCCccccHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHcCCCHHHHHHHHHHhhcCCCCHHHHH
Confidence 358999999999999988877777665 4445555432211 1112222211 111222223333333
Q ss_pred H----HHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 94 A----FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 94 ~----~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
. .+..........++|++.++|+.+ +.+++++|+++...+...++.+|+..+|+.++++++.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~-------- 144 (214)
T 3e58_A 73 EEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKES-------- 144 (214)
T ss_dssp HHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSC--------
T ss_pred HHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCC--------
Confidence 2 222222112346889999998887 4899999999999999999999999999999999988765
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC---CCCccccccCHhH
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHN 243 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~---~~~a~~~~~~l~~ 243 (274)
||+++++..+++++|++|+++++|||+.+|+.+|+++|+++++++++.. ...++++++++.+
T Consensus 145 ---------------kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~e 209 (214)
T 3e58_A 145 ---------------KPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTD 209 (214)
T ss_dssp ---------------TTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGG
T ss_pred ---------------CCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987542 5789999999999
Q ss_pred HHHH
Q 024023 244 IKEA 247 (274)
Q Consensus 244 l~~~ 247 (274)
|.++
T Consensus 210 l~~~ 213 (214)
T 3e58_A 210 VLDL 213 (214)
T ss_dssp GGGG
T ss_pred HHhh
Confidence 8764
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=197.81 Aligned_cols=209 Identities=17% Similarity=0.241 Sum_probs=149.9
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHH-Hhc-------CcHHH---------H
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYR-EHG-------TTMAG---------L 80 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~-------~~~~~---------~ 80 (274)
.+++|+|+||+||||+|+...+..++.+.+.. +....|++. ........... ..+ ..... +
T Consensus 15 ~~~~k~viFDlDGTLvds~~~~~~a~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (260)
T 2gfh_A 15 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKL-LQSKYHYKE-EAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAI 92 (260)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHH-HHHTTCCCT-HHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHH
T ss_pred cccceEEEEcCCCCCCCCHHHHHHHHHHHHHH-HHHhcCCcH-HHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHH
Confidence 45789999999999999887777777654443 333566654 22222121111 111 11110 1
Q ss_pred HHh-cCCCChHHHH---HHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEeccc
Q 024023 81 KAV-GYEFDNDEFH---AFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFET 154 (274)
Q Consensus 81 ~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~ 154 (274)
... +.....+... +.+.... ...+.++||+.++|+.|+ .+++|+||++...+...++.+|+..+|+.++++++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~ 171 (260)
T 2gfh_A 93 QETKGGADNRKLAEECYFLWKSTR-LQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGE 171 (260)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHHHH-HHTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGG
T ss_pred HHhcCccchHHHHHHHHHHHHHHH-HhcCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCC
Confidence 111 1111222111 1111111 134688999999999884 78999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCC-hhcHHHHHHcCC-eEEEECCCCC--
Q 024023 155 INPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGL-HTVIVGSSVP-- 230 (274)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs-~~Di~~a~~~G~-~~v~v~~~~~-- 230 (274)
.+.. ||+|+++..+++++|++|++|++|||+ .+|+.+|+++|+ .++++.++..
T Consensus 172 ~~~~-----------------------KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~ 228 (260)
T 2gfh_A 172 QKEE-----------------------KPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVP 228 (260)
T ss_dssp SSSC-----------------------TTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCC
T ss_pred CCCC-----------------------CCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCc
Confidence 8765 999999999999999999999999996 899999999999 7999976532
Q ss_pred ---CCCccccccCHhHHHHHHHHHH
Q 024023 231 ---VPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 231 ---~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
...++++++++.+|.++|..+.
T Consensus 229 ~~~~~~~~~~i~~~~el~~~l~~~~ 253 (260)
T 2gfh_A 229 LTSSPMPHYMVSSVLELPALLQSID 253 (260)
T ss_dssp SSCCCCCSEEESSGGGHHHHHHHHT
T ss_pred CcccCCCCEEECCHHHHHHHHHHHh
Confidence 3568999999999999887654
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=198.75 Aligned_cols=201 Identities=15% Similarity=0.092 Sum_probs=149.5
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcCCCChHHH
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDNDEF 92 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 92 (274)
|+++|+|+||+||||+++...+...+.+ .++..|.+..... +....+..... +...+.....+.+
T Consensus 3 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 72 (233)
T 3s6j_A 3 LRPQTSFIFDLDGTLTDSVYQNVAAWKE-----ALDAENIPLAMWR-----IHRKIGMSGGLMLKSLSRETGMSITDEQA 72 (233)
T ss_dssp --CCCEEEECCBTTTEECHHHHHHHHHH-----HHHHTTCCCCHHH-----HHHHTTSCHHHHHHHHHHC----CCHHHH
T ss_pred CCcCcEEEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHcCCcHHHHHHHHHHhcCCCCCHHHH
Confidence 4568999999999999987777776665 4555676644311 22223333221 1222333333333
Q ss_pred HHHH---hccC--CCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCC
Q 024023 93 HAFV---HGKL--PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 164 (274)
Q Consensus 93 ~~~~---~~~~--~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~ 164 (274)
.... ...+ ......++|++.++|+.+ +.+++++|++....+...++.+|+..+|+.++++++.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~------ 146 (233)
T 3s6j_A 73 ERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYG------ 146 (233)
T ss_dssp HHHHHHHHHHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCC------
T ss_pred HHHHHHHHHHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCC------
Confidence 2221 1110 123467889999998877 5899999999999999999999999999999999988764
Q ss_pred CCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccc
Q 024023 165 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHAL 238 (274)
Q Consensus 165 ~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~ 238 (274)
||++.++..+++++|++|+++++|||+.+|+.+|+++|+.++++.++.. ..++++++
T Consensus 147 -----------------kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~ 209 (233)
T 3s6j_A 147 -----------------KPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY 209 (233)
T ss_dssp -----------------TTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE
T ss_pred -----------------CCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE
Confidence 9999999999999999999999999999999999999999999988743 34699999
Q ss_pred cCHhHHHHHHHHH
Q 024023 239 NSIHNIKEAIPEI 251 (274)
Q Consensus 239 ~~l~~l~~~l~~~ 251 (274)
+++.+|.++|+..
T Consensus 210 ~~~~el~~~l~~~ 222 (233)
T 3s6j_A 210 EDPLDLLNHLDEI 222 (233)
T ss_dssp SSHHHHHHTGGGT
T ss_pred CCHHHHHHHHHHH
Confidence 9999999876554
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-27 Score=198.42 Aligned_cols=200 Identities=17% Similarity=0.180 Sum_probs=148.4
Q ss_pred CCCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHH--hcCCCChHH---
Q 024023 17 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA--VGYEFDNDE--- 91 (274)
Q Consensus 17 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--- 91 (274)
..+++|+|+||+||||+++...+...+.+ .++..|..... . .+....+........ .+.......
T Consensus 15 ~~~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~-~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (237)
T 4ex6_A 15 PAAADRGVILDLDGTLADTPAAIATITAE-----VLAAMGTAVSR-G----AILSTVGRPLPASLAGLLGVPVEDPRVAE 84 (237)
T ss_dssp --CCCEEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCH-H----HHHHHTTSCHHHHHHHHHTSCTTSHHHHH
T ss_pred CcccCCEEEEcCCCCCcCCHHHHHHHHHH-----HHHHcCCCCCH-H----HHHHhcCccHHHHHHHHhCCCCCHHHHHH
Confidence 34689999999999999988887777765 44445522221 1 122233333222111 111111111
Q ss_pred ----HHHHHhccCCC--CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC
Q 024023 92 ----FHAFVHGKLPY--EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 162 (274)
Q Consensus 92 ----~~~~~~~~~~~--~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~ 162 (274)
+.+.+.... . ....++|++.++|+.+ +.+++++|++....+...++.+|+..+|+.++++++++..
T Consensus 85 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---- 159 (237)
T 4ex6_A 85 ATEEYGRRFGAHV-RAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERG---- 159 (237)
T ss_dssp HHHHHHHHHHHHH-HHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSC----
T ss_pred HHHHHHHHHHHhc-ccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCC----
Confidence 111111111 1 4457889999998888 5889999999999999999999999999999999988764
Q ss_pred CCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccc
Q 024023 163 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADH 236 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~ 236 (274)
||+++++..+++++|++|++|++|||+.||+.||+.+|+.++++.++.. ...+++
T Consensus 160 -------------------kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~ 220 (237)
T 4ex6_A 160 -------------------KPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADT 220 (237)
T ss_dssp -------------------TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSE
T ss_pred -------------------CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCE
Confidence 9999999999999999999999999999999999999999999988764 247999
Q ss_pred cccCHhHHHHHHHH
Q 024023 237 ALNSIHNIKEAIPE 250 (274)
Q Consensus 237 ~~~~l~~l~~~l~~ 250 (274)
++.++.+|.++|+.
T Consensus 221 v~~~~~el~~~l~~ 234 (237)
T 4ex6_A 221 VVDSFPAAVTAVLD 234 (237)
T ss_dssp EESSHHHHHHHHHH
T ss_pred EECCHHHHHHHHHc
Confidence 99999999998764
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.3e-27 Score=193.76 Aligned_cols=144 Identities=17% Similarity=0.281 Sum_probs=120.9
Q ss_pred HhcCCCChHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCC
Q 024023 82 AVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~ 158 (274)
..+.....+........ +....++|++.++|+.+ +.+++++|+++...+...++.+|+..+|+.++++++.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~ 151 (230)
T 3um9_A 75 SLGLALDADGEAHLCSE---YLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLF 151 (230)
T ss_dssp HHTCCCCHHHHHHHHHH---TTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCC
T ss_pred HcCCCCCHHHHHHHHHH---HhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccC
Confidence 34444444444433332 25578899999998877 5889999999999999999999999999999999988764
Q ss_pred CCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCC
Q 024023 159 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPP 233 (274)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~ 233 (274)
||++.++..+++++|++|+++++|||+.+|+.+|+++|++++++.++.. ...
T Consensus 152 -----------------------kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~ 208 (230)
T 3um9_A 152 -----------------------KPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVV 208 (230)
T ss_dssp -----------------------TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCC
T ss_pred -----------------------CCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCC
Confidence 9999999999999999999999999999999999999999999987654 357
Q ss_pred ccccccCHhHHHHHHHHH
Q 024023 234 ADHALNSIHNIKEAIPEI 251 (274)
Q Consensus 234 a~~~~~~l~~l~~~l~~~ 251 (274)
++++++++.+|.++|..+
T Consensus 209 ~~~~~~~~~el~~~l~~~ 226 (230)
T 3um9_A 209 PDIVVSDVGVLASRFSPV 226 (230)
T ss_dssp CSEEESSHHHHHHTCCC-
T ss_pred CcEEeCCHHHHHHHHHHh
Confidence 999999999998876543
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-26 Score=192.44 Aligned_cols=195 Identities=16% Similarity=0.211 Sum_probs=144.3
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCC-cchHHHHHHHHHHHhcCcHHHHH-Hh--------------
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHID-ESEVPRMCLELYREHGTTMAGLK-AV-------------- 83 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~-~~-------------- 83 (274)
++|+|+||+||||+|+...+..++.+ .++..|.+ ...... +....|....... ..
T Consensus 3 ~~k~viFDlDGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 73 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSADLTSALNY-----AFEQTGHRHDFTVED----IKNFFGSGVVVAVTRALAYEAGSSRESLVA 73 (240)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTSCCCCCHHH----HHHHCSSCHHHHHHHHHHHHTTCCHHHHTT
T ss_pred cccEEEEecCCCCccCHHHHHHHHHH-----HHHHcCCCCCCCHHH----HHHhcCccHHHHHHHHHHhccccccccccc
Confidence 57999999999999988888887775 44556665 221111 1122232211100 00
Q ss_pred --------cCCCChHHH-------HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCc
Q 024023 84 --------GYEFDNDEF-------HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC 145 (274)
Q Consensus 84 --------~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~ 145 (274)
+.....+.+ .+.+... ......++||+.++|+.| +.+++|+||++...+...++.+|+. +
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~ 151 (240)
T 2hi0_A 74 FGTKDEQIPEAVTQTEVNRVLEVFKPYYADH-CQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S 151 (240)
T ss_dssp TTSTTCCCCTTCCHHHHHHHHHHHHHHHHHT-SSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T
T ss_pred ccccccccCCCCCHHHHHHHHHHHHHHHHHh-hhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c
Confidence 111222221 2222221 124567899999998877 4889999999999999999999998 9
Q ss_pred cceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 146 FEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 146 fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
|+.++++++.... ||+|+++..+++++|++|++|++|||+.+|+.+|+++|+.++++
T Consensus 152 f~~~~~~~~~~~~-----------------------Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v 208 (240)
T 2hi0_A 152 FDFALGEKSGIRR-----------------------KPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAV 208 (240)
T ss_dssp CSEEEEECTTSCC-----------------------TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred eeEEEecCCCCCC-----------------------CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 9999999887664 99999999999999999999999999999999999999999999
Q ss_pred CCCCC------CCCccccccCHhHHHHHH
Q 024023 226 GSSVP------VPPADHALNSIHNIKEAI 248 (274)
Q Consensus 226 ~~~~~------~~~a~~~~~~l~~l~~~l 248 (274)
.++.. ...+++++.++.++.+.|
T Consensus 209 ~~~~~~~~~~~~~~a~~~~~~~~el~~~l 237 (240)
T 2hi0_A 209 NWGFRSVPFLQKHGATVIVDTAEKLEEAI 237 (240)
T ss_dssp SSSSSCHHHHHHTTCCCEECSHHHHHHHH
T ss_pred CCCCCchhHHHhcCCCEEECCHHHHHHHh
Confidence 88753 246899999999988765
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=193.23 Aligned_cols=144 Identities=13% Similarity=0.153 Sum_probs=120.2
Q ss_pred HhcCCCChHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCC
Q 024023 82 AVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~ 158 (274)
..+.....+........ +....++|++.++|+.+ +.+++++||++...+...++.+|+..+|+.++++++.+..
T Consensus 78 ~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~ 154 (233)
T 3umb_A 78 RLNLPLGNHAEATLMRE---YACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLY 154 (233)
T ss_dssp HTTCCCCHHHHHHHHHH---HHSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCC
T ss_pred HcCCCCCHHHHHHHHHH---HhcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCC
Confidence 34444444443333221 23467889999988877 4899999999999999999999999999999999988765
Q ss_pred CCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCC
Q 024023 159 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPP 233 (274)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~ 233 (274)
||++.++..+++++|++|+++++|||+.+|+.+|+++|++++++.++.. ...
T Consensus 155 -----------------------kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~ 211 (233)
T 3umb_A 155 -----------------------KTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVA 211 (233)
T ss_dssp -----------------------TTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCC
T ss_pred -----------------------CcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCC
Confidence 9999999999999999999999999999999999999999999987654 346
Q ss_pred ccccccCHhHHHHHHHHH
Q 024023 234 ADHALNSIHNIKEAIPEI 251 (274)
Q Consensus 234 a~~~~~~l~~l~~~l~~~ 251 (274)
++++++++.+|.++|...
T Consensus 212 ~~~v~~~~~el~~~l~~~ 229 (233)
T 3umb_A 212 PAAAGHDMRDLLQFVQAR 229 (233)
T ss_dssp CSEEESSHHHHHHHHHC-
T ss_pred CCEEECCHHHHHHHHHHh
Confidence 999999999999987643
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-27 Score=199.25 Aligned_cols=200 Identities=16% Similarity=0.102 Sum_probs=151.8
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcCCCChHHH
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDNDEF 92 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 92 (274)
++++|+|+||+||||+|+...+...+.+ .++..|.+..... ......|..... ....+.....+.+
T Consensus 25 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 95 (259)
T 4eek_A 25 DAPFDAVLFDLDGVLVESEGIIAQVWQS-----VLAERGLHLDLTE----IAMYFTGQRFDGVLAYLAQQHDFVPPPDFL 95 (259)
T ss_dssp CCCCSEEEEESBTTTEECHHHHHHHHHH-----HHHHTTCCCCHHH----HHHHTTTCCHHHHHHHHHHHHCCCCCTTHH
T ss_pred hcCCCEEEECCCCCcccCHHHHHHHHHH-----HHHHhCCCCCHHH----HHHHHhCCCHHHHHHHHHHHcCCCCCHHHH
Confidence 4578999999999999988877777765 4555666543211 111112222221 1122333333222
Q ss_pred ---HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccce-eEecccCC-CCCCCCCC
Q 024023 93 ---HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG-IICFETIN-PRLQPADN 164 (274)
Q Consensus 93 ---~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~-i~~~~~~~-~~~~~~~~ 164 (274)
.+.+.+.. ....++|++.++|+.+ +.+++|+|++....+...++.+|+..+|+. ++++++.+ ..
T Consensus 96 ~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~------ 167 (259)
T 4eek_A 96 DVLETRFNAAM--TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRG------ 167 (259)
T ss_dssp HHHHHHHHHHH--TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCC------
T ss_pred HHHHHHHHHHh--ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCC------
Confidence 22222211 4567899999999888 589999999999999999999999999999 99998887 64
Q ss_pred CCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----------CCCc
Q 024023 165 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----------VPPA 234 (274)
Q Consensus 165 ~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----------~~~a 234 (274)
||+++++..+++++|++|+++++|||+.+|+.+|+++|++++++.++.. ..++
T Consensus 168 -----------------Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~a 230 (259)
T 4eek_A 168 -----------------KPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGA 230 (259)
T ss_dssp -----------------TTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTC
T ss_pred -----------------CCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCc
Confidence 9999999999999999999999999999999999999999999987743 2569
Q ss_pred cccccCHhHHHHHHHHH
Q 024023 235 DHALNSIHNIKEAIPEI 251 (274)
Q Consensus 235 ~~~~~~l~~l~~~l~~~ 251 (274)
+++++++.+|.++|...
T Consensus 231 d~vi~~l~el~~~l~~~ 247 (259)
T 4eek_A 231 ARVLTSHAELRAALAEA 247 (259)
T ss_dssp SEEECSHHHHHHHHHHT
T ss_pred chhhCCHHHHHHHHHhc
Confidence 99999999999988764
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-26 Score=196.73 Aligned_cols=204 Identities=15% Similarity=0.089 Sum_probs=149.2
Q ss_pred CCCCccEEEEecCCCccCCchhH-HHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH---------------HH
Q 024023 17 TAANYECLLFDLDDTLYPLSTGF-NLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA---------------GL 80 (274)
Q Consensus 17 ~~~~~k~viFDlDGTL~d~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------------~~ 80 (274)
.|+++|+|+||+||||+++...+ ...+.+ .++..|++... . ......+.... ..
T Consensus 10 ~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~~g~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (277)
T 3iru_A 10 CAGPVEALILDWAGTTIDFGSLAPVYAFME-----LFKQEGIEVTQ-A----EAREPMGTEKSEHIRRMLGNSRIANAWL 79 (277)
T ss_dssp CCCCCCEEEEESBTTTBSTTCCHHHHHHHH-----HHHTTTCCCCH-H----HHHTTTTSCHHHHHHHHTTSHHHHHHHH
T ss_pred hhccCcEEEEcCCCCcccCCcccHHHHHHH-----HHHHhCCCCCH-H----HHHHHhcCchHHHHHHhccchHHHHHHH
Confidence 35578999999999999976655 455543 45556665321 1 11111111111 11
Q ss_pred HHhcCCCChHHHHHHHhcc------CCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCc-cceeE
Q 024023 81 KAVGYEFDNDEFHAFVHGK------LPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC-FEGII 150 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~-fd~i~ 150 (274)
...+.....+.+...+... .......++|++.++|+.+ +.+++++|+++...+...++.+|+..+ |+.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~ 159 (277)
T 3iru_A 80 SIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTV 159 (277)
T ss_dssp HHHSSCCCHHHHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEE
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEe
Confidence 1223333333322211110 0013457889999998877 488999999999999999999998888 89999
Q ss_pred ecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCC-CeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 151 CFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~-~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
++++.... ||++.++..+++++|++| ++|++|||+.||+.+|+++|+.++++.++.
T Consensus 160 ~~~~~~~~-----------------------kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~ 216 (277)
T 3iru_A 160 FATDVVRG-----------------------RPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSG 216 (277)
T ss_dssp CGGGSSSC-----------------------TTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSS
T ss_pred cHHhcCCC-----------------------CCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCC
Confidence 99987764 999999999999999999 999999999999999999999999999884
Q ss_pred C-----------------------------CCCccccccCHhHHHHHHHHHHh
Q 024023 230 P-----------------------------VPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 230 ~-----------------------------~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
. ..+|+++++++.+|.++|..+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 269 (277)
T 3iru_A 217 NEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVITDVNR 269 (277)
T ss_dssp TTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHHHHHHH
T ss_pred cccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHHHHHHH
Confidence 2 24699999999999998887754
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-26 Score=189.04 Aligned_cols=202 Identities=19% Similarity=0.191 Sum_probs=147.9
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhc--------C---------cHHHH
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHG--------T---------TMAGL 80 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~---------~~~~~ 80 (274)
|+++|+|+||+||||+|+...+...+.+ .++..|.+.... .+...+..... . .....
T Consensus 3 ~~~~k~i~fD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (240)
T 3smv_A 3 LTDFKALTFDCYGTLIDWETGIVNALQP-----LAKRTGKTFTSD-ELLEVFGRNESPQQTETPGALYQDILRAVYDRIA 76 (240)
T ss_dssp GGGCSEEEECCBTTTBCHHHHHHHHTHH-----HHHHHTCCCCHH-HHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHH
T ss_pred CccceEEEEeCCCcCcCCchhHHHHHHH-----HHHHhCCCCCHH-HHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHH
Confidence 4568999999999999977777777665 344456654321 11111111100 0 01112
Q ss_pred HHhcCCCChHHHHHHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCC
Q 024023 81 KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR 158 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~ 158 (274)
...+.....+.... +... .....++|++.++|+.++ .+++++||++.......++. +..+|+.++++++++..
T Consensus 77 ~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~~~~~~ 151 (240)
T 3smv_A 77 KEWGLEPDAAEREE-FGTS--VKNWPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQDVGSY 151 (240)
T ss_dssp HHTTCCCCHHHHHH-HHTG--GGGCCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHHHHTSC
T ss_pred HHhCCCCCHHHHHH-HHHH--HhcCCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHh--cCCccCEEEEccccCCC
Confidence 33344444333322 2221 245688999999988884 88999999999988888877 56789999999988875
Q ss_pred CCCCCCCCcccccccCcccccCCCCCHHHHHHH---HHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCC------
Q 024023 159 LQPADNTDGIENNSFSSNQRILCKPSLEAIETA---IRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSS------ 228 (274)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~---l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~------ 228 (274)
||+|+.+..+ ++++|++|++|++|||+. +|+.+|+++|+++++++.+
T Consensus 152 -----------------------KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~ 208 (240)
T 3smv_A 152 -----------------------KPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGY 208 (240)
T ss_dssp -----------------------TTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC----
T ss_pred -----------------------CCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCC
Confidence 9999999988 899999999999999997 9999999999999998765
Q ss_pred -----C-CCCCccccccCHhHHHHHHHHHHh
Q 024023 229 -----V-PVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 229 -----~-~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
. ....++++++++.+|.++|..+..
T Consensus 209 g~~~~~~~~~~ad~v~~~~~el~~~l~~~l~ 239 (240)
T 3smv_A 209 GATHVPSRMPNVDFRFNSMGEMAEAHKQALK 239 (240)
T ss_dssp ---CCCSSCCCCSEEESSHHHHHHHHHHHHH
T ss_pred CCCCCCcCCCCCCEEeCCHHHHHHHHHHHhc
Confidence 1 147899999999999999887653
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-27 Score=196.11 Aligned_cols=202 Identities=20% Similarity=0.250 Sum_probs=147.4
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-HH----hcCCCChHHHHH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KA----VGYEFDNDEFHA 94 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~ 94 (274)
++|+|+||+||||+|+...+...+.+ .++..|.+...... +...+|...... .. .........+.+
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (222)
T 2nyv_A 2 SLRVILFDLDGTLIDSAKDIALALEK-----TLKELGLEEYYPDN----VTKYIGGGVRALLEKVLKDKFREEYVEVFRK 72 (222)
T ss_dssp EECEEEECTBTTTEECHHHHHHHHHH-----HHHHTTCGGGCCSC----GGGGCSSCHHHHHHHHHGGGCCTHHHHHHHH
T ss_pred CCCEEEECCCCcCCCCHHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHhCcCHHHHHHHHhChHHHHHHHHHHHH
Confidence 57899999999999988877776665 44455554111000 011112211111 00 001100122333
Q ss_pred HHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccccc
Q 024023 95 FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 171 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
.+... ......++||+.++|+.| +.+++++|+++...+...++.+|+..+|+.++++++++..
T Consensus 73 ~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~------------- 138 (222)
T 2nyv_A 73 HYLEN-PVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEK------------- 138 (222)
T ss_dssp HHHHC-SCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTT-------------
T ss_pred HHHHh-ccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCC-------------
Confidence 33222 124577899999998877 5889999999999999999999999999999999887765
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC---CCCccccccCHhHHHHHH
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKEAI 248 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~---~~~a~~~~~~l~~l~~~l 248 (274)
||+|+.+..+++++|++|+++++|||+.+|+.+|+++|+.++++.++.. ...++++++++.++.+++
T Consensus 139 ----------Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 139 ----------KPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNSQIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp ----------CCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCCCCCSEEESSTTHHHHHH
T ss_pred ----------CCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccccCCCEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987653 257899999999999877
Q ss_pred HHHHhh
Q 024023 249 PEIWEG 254 (274)
Q Consensus 249 ~~~~~~ 254 (274)
.....+
T Consensus 209 ~~~~~~ 214 (222)
T 2nyv_A 209 DNHIVE 214 (222)
T ss_dssp HTTSSE
T ss_pred HHhhhh
Confidence 654433
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.94 E-value=5e-26 Score=191.40 Aligned_cols=200 Identities=17% Similarity=0.210 Sum_probs=147.0
Q ss_pred CCCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHH-------HHh--cC------------
Q 024023 17 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELY-------REH--GT------------ 75 (274)
Q Consensus 17 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~--~~------------ 75 (274)
.++++|+|+||+||||+|+...+...+.+ .+++.|.+....... ..+. ..+ +.
T Consensus 11 ~~~~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (254)
T 3umg_A 11 TGRNVRAVLFDTFGTVVDWRTGIATAVAD-----YAARHQLEVDAVAFA-DRWRARYQPSMDAILSGAREFVTLDILHRE 84 (254)
T ss_dssp TCSBCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHHH-HHHHTTHHHHHHHHHTTSSCCCCHHHHHHH
T ss_pred CCCCceEEEEeCCCceecCchHHHHHHHH-----HHHHhcCCCCHHHHH-HHHHHhHHHHHHHHHhcCCCCCCHHHHHHH
Confidence 34578999999999999977777776665 455556654321111 1100 000 00
Q ss_pred c-HHHHHHhcC---CCChHHHHHHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCcccee
Q 024023 76 T-MAGLKAVGY---EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGI 149 (274)
Q Consensus 76 ~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i 149 (274)
. ...+...+. ....+........ +....++|++.++|+.++ .+++++|+++...+...++.+|+. |+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~--f~~~ 159 (254)
T 3umg_A 85 NLDFVLRESGIDPTNHDSGELDELARA---WHVLTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP--WDVI 159 (254)
T ss_dssp HHHHHHHHTTCCGGGSCHHHHHHHHGG---GGSCCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC--CSCC
T ss_pred HHHHHHHHhCCCcCcCCHHHHHHHHHH---HhhCcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC--eeEE
Confidence 0 011122233 2233333333221 245678999999998885 889999999999999999999986 8999
Q ss_pred EecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC---
Q 024023 150 ICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG--- 226 (274)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~--- 226 (274)
+++++.+.. ||++.++..+++++|++|+++++|||+.||+.+|+.+|+++++++
T Consensus 160 ~~~~~~~~~-----------------------kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~ 216 (254)
T 3umg_A 160 IGSDINRKY-----------------------KPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPV 216 (254)
T ss_dssp CCHHHHTCC-----------------------TTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTT
T ss_pred EEcCcCCCC-----------------------CCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCC
Confidence 999887765 999999999999999999999999999999999999999999998
Q ss_pred -CCCC-------CCCccccccCHhHHHHHHHH
Q 024023 227 -SSVP-------VPPADHALNSIHNIKEAIPE 250 (274)
Q Consensus 227 -~~~~-------~~~a~~~~~~l~~l~~~l~~ 250 (274)
++.. ...++++++++.+|.++|..
T Consensus 217 ~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 217 EHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp TTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred cCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 5442 46789999999999998765
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-27 Score=199.92 Aligned_cols=200 Identities=16% Similarity=0.189 Sum_probs=147.8
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH-----HHHHhcCCCChHHH
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEF 92 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 92 (274)
++++|+|+||+||||+|+...+...+.+ ..++.|...... ......|.... .+...+.....+.+
T Consensus 27 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 96 (250)
T 3l5k_A 27 PQPVTHLIFDMDGLLLDTERLYSVVFQE-----ICNRYDKKYSWD-----VKSLVMGKKALEAAQIIIDVLQLPMSKEEL 96 (250)
T ss_dssp CCCCSEEEEETBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHH-----HHHHHTTCCHHHHHHHHHHHHTCSSCHHHH
T ss_pred ccCCcEEEEcCCCCcCCCHHHHHHHHHH-----HHHHhCCCCCHH-----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 3578999999999999977777766665 455566654321 11222232221 12233444444444
Q ss_pred HHHHhccC--CCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHH-cCCCCccceeEecc--cCCCCCCCCCC
Q 024023 93 HAFVHGKL--PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFE--TINPRLQPADN 164 (274)
Q Consensus 93 ~~~~~~~~--~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~-~gl~~~fd~i~~~~--~~~~~~~~~~~ 164 (274)
...+.... ......++|++.++|+.| +.+++++|++....+...+.. +|+..+|+.+++++ +++..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~------ 170 (250)
T 3l5k_A 97 VEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHG------ 170 (250)
T ss_dssp HHHHHHHHHHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSC------
T ss_pred HHHHHHHHHHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCC------
Confidence 33222211 124567899999998877 589999999998887777654 57889999999998 77664
Q ss_pred CCcccccccCcccccCCCCCHHHHHHHHHHhCCCC--CeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccc
Q 024023 165 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP--KKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHAL 238 (274)
Q Consensus 165 ~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~--~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~ 238 (274)
||+++++..+++++|+++ ++|++|||+.+|+.+|+++|+.++++.++.. ...+++++
T Consensus 171 -----------------Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~ 233 (250)
T 3l5k_A 171 -----------------KPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVL 233 (250)
T ss_dssp -----------------TTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEEC
T ss_pred -----------------CCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEee
Confidence 999999999999999998 9999999999999999999999999988763 57899999
Q ss_pred cCHhHHHHHHHH
Q 024023 239 NSIHNIKEAIPE 250 (274)
Q Consensus 239 ~~l~~l~~~l~~ 250 (274)
+++.+|.+.|..
T Consensus 234 ~sl~el~~~l~~ 245 (250)
T 3l5k_A 234 NSLQDFQPELFG 245 (250)
T ss_dssp SCGGGCCGGGGT
T ss_pred cCHHHhhHHHhc
Confidence 999998765543
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=189.91 Aligned_cols=189 Identities=20% Similarity=0.264 Sum_probs=140.0
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHh
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVH 97 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (274)
|+++|+|+||+||||+++...+.. +.+..|++..... ...+ . +........ ...+...+.
T Consensus 3 ~~~~k~iifDlDGTL~d~~~~~~~---------~~~~~g~~~~~~~--~~~~-~--~~~~~~~~~------~~~~~~~~~ 62 (205)
T 3m9l_A 3 LSEIKHWVFDMDGTLTIAVHDFAA---------IREALSIPAEDDI--LTHL-A--ALPADESAA------KHAWLLEHE 62 (205)
T ss_dssp GGGCCEEEECTBTTTEEEEECHHH---------HHHHTTCCTTSCH--HHHH-H--HSCHHHHHH------HHHHHHHTH
T ss_pred cccCCEEEEeCCCcCcccHHHHHH---------HHHHhCCCchHHH--HHHH-h--cCChHHHHH------HHHHHHHHH
Confidence 457899999999999997776653 4455676543211 1111 1 111110000 001111111
Q ss_pred ccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc--ceeEecccCCCCCCCCCCCCcccccc
Q 024023 98 GKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNS 172 (274)
Q Consensus 98 ~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~~~~~~~~~~~~~~~ 172 (274)
... .....++|++.++|+.+ +.+++++|++....+...++.+|+..+| +.+++.+. +.
T Consensus 63 ~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~--------------- 125 (205)
T 3m9l_A 63 RDL-AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-AP--------------- 125 (205)
T ss_dssp HHH-EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SC---------------
T ss_pred HHH-hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CC---------------
Confidence 111 23457889999988877 5899999999999999999999999999 77887765 44
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhHHHHHHHH
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHNIKEAIPE 250 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~l~~~l~~ 250 (274)
+||+++++..+++++|++++++++|||+.+|+.+|+++|+.++++.++.. ...++++++++.+|.+.++.
T Consensus 126 --------~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 126 --------PKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARDCAQLRDLLSA 197 (205)
T ss_dssp --------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEECSSHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEeCCHHHHHHHHHh
Confidence 49999999999999999999999999999999999999999999988775 45699999999999998765
Q ss_pred H
Q 024023 251 I 251 (274)
Q Consensus 251 ~ 251 (274)
-
T Consensus 198 ~ 198 (205)
T 3m9l_A 198 E 198 (205)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-26 Score=189.35 Aligned_cols=197 Identities=18% Similarity=0.211 Sum_probs=145.3
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-HHHhcCCCC-h-HHHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-LKAVGYEFD-N-DEFHAF 95 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~-~~~~~~ 95 (274)
|++|+|+||+||||+|+...+...+.+ .++..|..... ..+....|..... +..++.... . ..+..+
T Consensus 2 M~~k~iifDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (209)
T 2hdo_A 2 MTYQALMFDIDGTLTNSQPAYTTVMRE-----VLATYGKPFSP-----AQAQKTFPMAAEQAMTELGIAASEFDHFQAQY 71 (209)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHH-----HHHTTTCCCCH-----HHHHHHTTSCHHHHHHHTTCCGGGHHHHHHHH
T ss_pred CcccEEEEcCCCCCcCCHHHHHHHHHH-----HHHHhCCCCCH-----HHHHHHcCCcHHHHHHHcCCCHHHHHHHHHHH
Confidence 357999999999999988877777665 44556664322 1122333443322 222332210 1 111121
Q ss_pred HhccC-CCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccc
Q 024023 96 VHGKL-PYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 172 (274)
Q Consensus 96 ~~~~~-~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~ 172 (274)
+.... ......++|++.++|+.++ .+++++|+++...+...++.+|+..+|+.++++++.+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~-------------- 137 (209)
T 2hdo_A 72 EDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKR-------------- 137 (209)
T ss_dssp HHHHTTCGGGCEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCC--------------
T ss_pred HHHHhhhcccCCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCC--------------
Confidence 11111 1245678999999999886 678999999999999999999999999999999988764
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHHHHHH
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAI 248 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l~~~l 248 (274)
||+++++..+++++|++|+++++|||+.+|+.+|+++|+.+++++++.. ...+++++.++.+|.++|
T Consensus 138 ---------KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~l 208 (209)
T 2hdo_A 138 ---------KPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILELF 208 (209)
T ss_dssp ---------TTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGGC
T ss_pred ---------CCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHHHHhh
Confidence 9999999999999999999999999999999999999999999986543 122899999999987643
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.1e-26 Score=192.72 Aligned_cols=211 Identities=18% Similarity=0.230 Sum_probs=149.9
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHH--HHHHHH----HHHh-------cCcH---------H
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVP--RMCLEL----YREH-------GTTM---------A 78 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~----~~~~-------~~~~---------~ 78 (274)
+|+|+||+||||+++...+...+.+ +++..|....... ...... ...+ |... .
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 75 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYAT-----KARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQ 75 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHHH-----HHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHH
Confidence 4799999999999987777666664 5667777533211 111010 1110 1111 1
Q ss_pred HHHHhcCCCChHHH----HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEe
Q 024023 79 GLKAVGYEFDNDEF----HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC 151 (274)
Q Consensus 79 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~ 151 (274)
.+...+. ...+.+ ...+........+.++||+.++|+.| +.+++|+||+... +...++.+|+..+|+.+++
T Consensus 76 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~ 153 (263)
T 3k1z_A 76 TFHLAGV-QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLT 153 (263)
T ss_dssp HHHHTTC-CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEE
T ss_pred HHHHcCC-CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEe
Confidence 1112222 222222 22222222223457899999998887 5889999998775 6889999999999999999
Q ss_pred cccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC
Q 024023 152 FETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~ 230 (274)
+++++.. ||+|+++..+++++|++|++|++|||+. +|+.+|+++|+.+++++++..
T Consensus 154 ~~~~~~~-----------------------Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~ 210 (263)
T 3k1z_A 154 SEAAGWP-----------------------KPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQA 210 (263)
T ss_dssp HHHHSSC-----------------------TTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSC
T ss_pred ecccCCC-----------------------CCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCC
Confidence 9988765 9999999999999999999999999997 999999999999999998865
Q ss_pred C-------CCccccccCHhHHHHHHHHHHhhcccchhh
Q 024023 231 V-------PPADHALNSIHNIKEAIPEIWEGEGEQLEQ 261 (274)
Q Consensus 231 ~-------~~a~~~~~~l~~l~~~l~~~~~~~~~~~~~ 261 (274)
. ..+++++.++.+|.++|..+.......-.+
T Consensus 211 ~~~~~~~~~~ad~v~~~l~el~~~l~~~~~~~~~~~~~ 248 (263)
T 3k1z_A 211 LDPVVRDSVPKEHILPSLAHLLPALDCLEGSAENLYFQ 248 (263)
T ss_dssp CCHHHHHHSCGGGEESSGGGHHHHHHHHHHC-------
T ss_pred CchhhcccCCCceEeCCHHHHHHHHHHHHhcCCCCccc
Confidence 3 279999999999999999988765554443
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=188.87 Aligned_cols=204 Identities=23% Similarity=0.270 Sum_probs=145.4
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHH---hc----CcHH-HHHHh-cCCCCh--
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYRE---HG----TTMA-GLKAV-GYEFDN-- 89 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~----~~~~-~~~~~-~~~~~~-- 89 (274)
+|+|+||+||||+|+...+...+.+.+.+... .+..... ......+... .. .... .+... +.....
T Consensus 2 ~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIR--HGLPVDF-ETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNPKWI 78 (241)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHHHH--TTCCSCH-HHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCHHHH
T ss_pred ccEEEEcCCCCCCCChhhHHHHHHHHHHHHHH--ccccccH-HHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccchHH
Confidence 68999999999999888777777665554321 1222211 1111111110 00 0011 11222 222111
Q ss_pred HHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 90 DEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
..+...+.... .....++|++.++|+.| +.+++++|++....+...++.+|+..+|+.++++++.+..
T Consensus 79 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~-------- 149 (241)
T 2hoq_A 79 SAGVIAYHNTK-FAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVK-------- 149 (241)
T ss_dssp HHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCC--------
T ss_pred HHHHHHHHHHH-HhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCC--------
Confidence 12222222111 12356889999999887 5889999999999999999999999999999999988765
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC----C---CCccccc
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----V---PPADHAL 238 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~----~---~~a~~~~ 238 (274)
||+|+.+..+++++|++|++|++|||+. ||+.+|+++|+.++++.++.. . ..+++++
T Consensus 150 ---------------Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i 214 (241)
T 2hoq_A 150 ---------------KPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI 214 (241)
T ss_dssp ---------------TTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE
T ss_pred ---------------CCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE
Confidence 9999999999999999999999999998 999999999999999977753 1 2789999
Q ss_pred cCHhHHHHHHHHH
Q 024023 239 NSIHNIKEAIPEI 251 (274)
Q Consensus 239 ~~l~~l~~~l~~~ 251 (274)
+++.+|.++|..+
T Consensus 215 ~~~~el~~~l~~~ 227 (241)
T 2hoq_A 215 DNLESLLEVLARE 227 (241)
T ss_dssp SSTTHHHHHHHHC
T ss_pred CCHHHHHHHHHHH
Confidence 9999999887654
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-25 Score=186.52 Aligned_cols=201 Identities=20% Similarity=0.273 Sum_probs=147.0
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcc--hHHHHHHHH-------HHHhc--C-c---------H
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDES--EVPRMCLEL-------YREHG--T-T---------M 77 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~-------~~~~~--~-~---------~ 77 (274)
|++|+|+||+||||+++...+...+.+ .++..|.+.. ....+...+ +..+. . . .
T Consensus 3 m~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRNARDTFEE-----VYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFF 77 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhhHHHHHHH-----HHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 368999999999999977777666664 4455565431 111111111 11110 0 0 1
Q ss_pred HHHHHhcCCCChHHH---HHHHhccCCCCCCCCChhHHHHHHhC--CCcEEEEeCCChHHHHHHHHHcCCCCccceeEec
Q 024023 78 AGLKAVGYEFDNDEF---HAFVHGKLPYEKLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF 152 (274)
Q Consensus 78 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~L~~l--~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~ 152 (274)
..+...+.. ..+.. ...+.... .....++|++.++|+.+ +.+++++|+++.......++.+|+..+|+.++++
T Consensus 78 ~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~ 155 (240)
T 3qnm_A 78 YPLQAVGVE-DEALAERFSEDFFAII-PTKSGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILS 155 (240)
T ss_dssp HHHHHTTCC-CHHHHHHHHHHHHHHG-GGCCCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEG
T ss_pred HHHHHcCCC-cHHHHHHHHHHHHHHh-hhcCCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEe
Confidence 112223333 22221 12222211 24467899999998887 4789999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC-
Q 024023 153 ETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP- 230 (274)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~- 230 (274)
++.+.. ||++.++..+++++|++|+++++|||+. +|+.+|+++|+++++++++..
T Consensus 156 ~~~~~~-----------------------kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~ 212 (240)
T 3qnm_A 156 EDLGVL-----------------------KPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERT 212 (240)
T ss_dssp GGTTCC-----------------------TTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCC
T ss_pred ccCCCC-----------------------CCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCC
Confidence 988765 9999999999999999999999999996 999999999999999988763
Q ss_pred --CCCccccccCHhHHHHHHH
Q 024023 231 --VPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 231 --~~~a~~~~~~l~~l~~~l~ 249 (274)
...|+++++++.++.++.+
T Consensus 213 ~~~~~~d~vi~sl~e~~~~~~ 233 (240)
T 3qnm_A 213 VFPFQPTYHIHSLKELMNLLE 233 (240)
T ss_dssp CCSSCCSEEESSTHHHHHHTC
T ss_pred CcCCCCceEECCHHHHHHHHh
Confidence 5689999999999998643
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-25 Score=185.89 Aligned_cols=202 Identities=15% Similarity=0.164 Sum_probs=142.0
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHH-HHHHH----HHHh---cCcHH-------HH-HHh
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPR-MCLEL----YREH---GTTMA-------GL-KAV 83 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~----~~~~---~~~~~-------~~-~~~ 83 (274)
++|+|+||+||||+|+...+...+.+ ..+..|........ ..... +..+ |.... .+ ...
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 77 (235)
T 2om6_A 3 EVKLVTFDVWNTLLDLNIMLDEFSHQ-----LAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKL 77 (235)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCCCCcchhHHHHHHH-----HHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHh
Confidence 47999999999999977777666654 33444554332110 00000 1100 22111 11 111
Q ss_pred cCCC-ChHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCC---hHHHHHHHHHcCCCCccceeEecccCC
Q 024023 84 GYEF-DNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNAD---QKHAMEVLGRLGLEDCFEGIICFETIN 156 (274)
Q Consensus 84 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~---~~~~~~~l~~~gl~~~fd~i~~~~~~~ 156 (274)
+... ....+...+.... ....++|++.++|+.+ +.+++++|++. .......++.+|+..+|+.++++++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~ 155 (235)
T 2om6_A 78 KVDVELVKRATARAILNV--DESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVL 155 (235)
T ss_dssp TCCHHHHHHHHHHHHHHC--CGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHT
T ss_pred CCCHHHHHHHHHHHHHhc--cccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccC
Confidence 2211 0111111121111 2224689999888877 58899999999 888899999999999999999998887
Q ss_pred CCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC----C
Q 024023 157 PRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----V 231 (274)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~----~ 231 (274)
.. ||+++++..+++++|++|+++++|||+. ||+.||+++|+++++++++.. .
T Consensus 156 ~~-----------------------kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~ 212 (235)
T 2om6_A 156 SY-----------------------KPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKL 212 (235)
T ss_dssp CC-----------------------TTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEE
T ss_pred CC-----------------------CCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccC
Confidence 65 9999999999999999999999999999 999999999999999987743 2
Q ss_pred CCccccccCHhHHHHHHHHH
Q 024023 232 PPADHALNSIHNIKEAIPEI 251 (274)
Q Consensus 232 ~~a~~~~~~l~~l~~~l~~~ 251 (274)
..++++++++.+|.++|+.+
T Consensus 213 ~~~~~~~~~~~el~~~l~~~ 232 (235)
T 2om6_A 213 EERGFEIPSIANLKDVIELI 232 (235)
T ss_dssp ETTEEEESSGGGHHHHHHHT
T ss_pred CCCcchHhhHHHHHHHHHHH
Confidence 34789999999999887654
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-26 Score=193.00 Aligned_cols=195 Identities=21% Similarity=0.262 Sum_probs=146.0
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHH-------H
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDE-------F 92 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 92 (274)
++|+|+||+||||+++...+...+.+ ..+..|.+... . .+....+.............+.+. +
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~-~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQY-----SLNSFGIKEDL-E----NLDQFIGPPLHDTFKEYYKFEDKKAKEAVEKY 97 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCG-G----GGGGGSSSCHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred hccEEEEecCCcCccCHHHHHHHHHH-----HHHHcCCCCCH-H----HHHHHhCccHHHHHHHHhCCCHHHHHHHHHHH
Confidence 47999999999999988777777765 44455655211 1 011111222111111111122221 2
Q ss_pred HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccc
Q 024023 93 HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 169 (274)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~ 169 (274)
.+.+... ......++|++.++|+.+ +.+++++|++....+...++.+|+..+|+.++++++.+..
T Consensus 98 ~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~----------- 165 (240)
T 3sd7_A 98 REYFADK-GIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTR----------- 165 (240)
T ss_dssp HHHHHHT-GGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCC-----------
T ss_pred HHHHHHh-cccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCC-----------
Confidence 2222221 123467899999998887 5889999999999999999999999999999999988764
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHhCCC-CCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHh
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIH 242 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~g~~-~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~ 242 (274)
||++.++..+++++|++ ++++++|||+.+|+.+|+++|+.++++.++.. ...++++++++.
T Consensus 166 ------------kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~ 233 (240)
T 3sd7_A 166 ------------VNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVE 233 (240)
T ss_dssp ------------CCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSST
T ss_pred ------------CCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHH
Confidence 99999999999999999 99999999999999999999999999997764 267999999999
Q ss_pred HHHHHH
Q 024023 243 NIKEAI 248 (274)
Q Consensus 243 ~l~~~l 248 (274)
+|.++|
T Consensus 234 el~~~l 239 (240)
T 3sd7_A 234 SIKDIL 239 (240)
T ss_dssp THHHHH
T ss_pred HHHHHh
Confidence 998875
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=187.39 Aligned_cols=127 Identities=18% Similarity=0.263 Sum_probs=110.8
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
....++|++.++|+.| +.+++++|+++...+...++.+|+..+|+.++++++.+..
T Consensus 92 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~--------------------- 150 (232)
T 1zrn_A 92 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVY--------------------- 150 (232)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCC---------------------
T ss_pred ccCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCC---------------------
Confidence 3467889999988877 5889999999999999999999999999999999887764
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCccccccCHhHHHHHHHHHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
||+|..+..+++++|++|+++++|||+.+|+.+|+++|+.++++.++.. ...++++++++.+|.++|....
T Consensus 151 --Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 226 (232)
T 1zrn_A 151 --KPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELFETAA 226 (232)
T ss_dssp --TTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTTC----
T ss_pred --CCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999987643 3568999999999988765543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=7.6e-26 Score=187.79 Aligned_cols=202 Identities=16% Similarity=0.198 Sum_probs=148.5
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcCCCChHH--
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDNDE-- 91 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-- 91 (274)
+++|+|+||+||||+++...+...+.+ .++..|.+...... .....+..... ....+.......
T Consensus 2 ~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (229)
T 2fdr_A 2 SGFDLIIFDCDGVLVDSEIIAAQVESR-----LLTEAGYPISVEEM----GERFAGMTWKNILLQVESEASIPLSASLLD 72 (229)
T ss_dssp -CCSEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHHH----HHHHTTCCHHHHHHHHHHHHCCCCCTHHHH
T ss_pred CCccEEEEcCCCCcCccHHHHHHHHHH-----HHHHhCCCCCHHHH----HHHHhCCCHHHHHHHHHHHcCCCCCHHHHH
Confidence 357999999999999988777666654 44555665431111 11112222111 112232222222
Q ss_pred -HHHHHhccCCCCCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCcc-ceeEecccCCCCCCCCCCCCccc
Q 024023 92 -FHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIE 169 (274)
Q Consensus 92 -~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~f-d~i~~~~~~~~~~~~~~~~~~~~ 169 (274)
+...+.... .....++|++.++|+.++.+++++|++....+...++.+|+..+| +.++++++.+.
T Consensus 73 ~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~------------ 139 (229)
T 2fdr_A 73 KSEKLLDMRL-ERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA------------ 139 (229)
T ss_dssp HHHHHHHHHH-HHHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT------------
T ss_pred HHHHHHHHHh-hcCCccCcCHHHHHHHhCCCEEEEECCChhHHHHHHHhCChHHhccceEEecccccc------------
Confidence 122221111 134578899999999998899999999999999999999999999 99999887653
Q ss_pred ccccCcccccCC--CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCC----------CCcccc
Q 024023 170 NNSFSSNQRILC--KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV----------PPADHA 237 (274)
Q Consensus 170 ~~~~~~~~~~~~--kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~----------~~a~~~ 237 (274)
+ ||++.++..+++++|++++++++|||+.||++||+.+|+.++++.++... .+++++
T Consensus 140 -----------~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v 208 (229)
T 2fdr_A 140 -----------DRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETV 208 (229)
T ss_dssp -----------TCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEE
T ss_pred -----------CCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCcee
Confidence 6 99999999999999999999999999999999999999999999877642 138999
Q ss_pred ccCHhHHHHHHHHHHh
Q 024023 238 LNSIHNIKEAIPEIWE 253 (274)
Q Consensus 238 ~~~l~~l~~~l~~~~~ 253 (274)
++++.++.++|+.++.
T Consensus 209 ~~~~~el~~~l~~~~~ 224 (229)
T 2fdr_A 209 ISRMQDLPAVIAAMAE 224 (229)
T ss_dssp ESCGGGHHHHHHHHTC
T ss_pred ecCHHHHHHHHHHhhh
Confidence 9999999998887654
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-26 Score=193.54 Aligned_cols=199 Identities=19% Similarity=0.236 Sum_probs=146.0
Q ss_pred CCCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-----HH----hcCCC
Q 024023 17 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-----KA----VGYEF 87 (274)
Q Consensus 17 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~ 87 (274)
.+.++|+|+||+||||+|+...+..++.+ .++.+|.+...... +....+...... .. .+...
T Consensus 19 ~~~~~k~iiFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (243)
T 2hsz_A 19 GMTQFKLIGFDLDGTLVNSLPDLALSINS-----ALKDVNLPQASENL----VMTWIGNGADVLSQRAVDWACKQAEKEL 89 (243)
T ss_dssp CCSSCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHH----HHHHCSSCHHHHHHHHHHHHHHHHTCCC
T ss_pred CCccCCEEEEcCCCcCCCCHHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHhCchHHHHHHHHhhhhhccccccC
Confidence 34578999999999999988777776664 45566665322111 111112211110 00 12222
Q ss_pred ChHHH-------HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCC
Q 024023 88 DNDEF-------HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINP 157 (274)
Q Consensus 88 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~ 157 (274)
..+.+ .+.+.... .....++||+.++|+.| +.+++|+|+++...+...++.+|+..+|+.++++++.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~ 168 (243)
T 2hsz_A 90 TEDEFKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE 168 (243)
T ss_dssp CHHHHHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS
T ss_pred CHHHHHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCC
Confidence 22222 22222211 24567889999998877 588999999999999999999999999999999988776
Q ss_pred CCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------C
Q 024023 158 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------V 231 (274)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~ 231 (274)
. ||++.++..+++++|++++++++|||+.+|+.+|+++|+.++++.++.. .
T Consensus 169 ~-----------------------Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~ 225 (243)
T 2hsz_A 169 I-----------------------KPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQ 225 (243)
T ss_dssp C-----------------------TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGG
T ss_pred C-----------------------CcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhh
Confidence 4 9999999999999999999999999999999999999999999987642 3
Q ss_pred CCccccccCHhHHHHHH
Q 024023 232 PPADHALNSIHNIKEAI 248 (274)
Q Consensus 232 ~~a~~~~~~l~~l~~~l 248 (274)
..++++++++.+|.+++
T Consensus 226 ~~ad~vi~~~~el~~~l 242 (243)
T 2hsz_A 226 SKPDWIFDDFADILKIT 242 (243)
T ss_dssp GCCSEEESSGGGGGGGT
T ss_pred CCCCEEECCHHHHHHHh
Confidence 56899999999987643
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=192.70 Aligned_cols=201 Identities=22% Similarity=0.284 Sum_probs=133.2
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcC--CCChHHHH
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGY--EFDNDEFH 93 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~ 93 (274)
+|+|+||+||||+|+...+...+.+ .++..|.+... ..+....|..... +...+. ..+.+.+.
T Consensus 2 ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAEYHFLAWKH-----IAEQIDIPFDR-----DMNERLKGISREESLESILIFGGAETKYTNAEKQ 71 (233)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHH-----HHHHTTCCCCH-----HHHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHH
T ss_pred CcEEEECCCCCcCCCHHHHHHHHHH-----HHHHcCCCCCH-----HHHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHH
Confidence 6899999999999987777766665 44556666332 1112222332211 111222 23332222
Q ss_pred H-------HHhccC-CCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC
Q 024023 94 A-------FVHGKL-PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 162 (274)
Q Consensus 94 ~-------~~~~~~-~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~ 162 (274)
. .+.... ......++||+.++|+.+ +.+++|+|++.. +...++.+|+..+|+.++++++++..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~---- 145 (233)
T 3nas_A 72 ELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKG---- 145 (233)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC----------
T ss_pred HHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCC----
Confidence 1 111111 012234789999998887 588999999855 77889999999999999999887764
Q ss_pred CCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHh
Q 024023 163 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIH 242 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~ 242 (274)
||+++++..+++++|++|++|++|||+.||+.||+++|+.++++++......|+++++++.
T Consensus 146 -------------------Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~ad~v~~s~~ 206 (233)
T 3nas_A 146 -------------------KPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPMLGADLVVRQTS 206 (233)
T ss_dssp ----------------------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC-------CSEECSSGG
T ss_pred -------------------CCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccccCCEEeCChH
Confidence 9999999999999999999999999999999999999999999988776669999999999
Q ss_pred HHH-HHHHHHHhhcc
Q 024023 243 NIK-EAIPEIWEGEG 256 (274)
Q Consensus 243 ~l~-~~l~~~~~~~~ 256 (274)
++. ..+.+.+....
T Consensus 207 el~~~~~~~~~~~~~ 221 (233)
T 3nas_A 207 DLTLELLHEEWEQYR 221 (233)
T ss_dssp GCCHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHH
Confidence 987 34555555443
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=188.79 Aligned_cols=125 Identities=17% Similarity=0.225 Sum_probs=111.7
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
...++|++.++|+.+ +.+++++||++...+...++.+|+..+|+.++++++.+..
T Consensus 103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---------------------- 160 (240)
T 2no4_A 103 ELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIY---------------------- 160 (240)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCC----------------------
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCC----------------------
Confidence 467889999998877 5889999999999999999999999999999999988765
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCc-cccccCHhHHHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPA-DHALNSIHNIKEAIPEI 251 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a-~~~~~~l~~l~~~l~~~ 251 (274)
||+|+++..+++++|++|+++++|||+.+|+.+|+++|+.++++.++.. ...+ +++++++.+|.++|..+
T Consensus 161 -Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 235 (240)
T 2no4_A 161 -KPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLLAKN 235 (240)
T ss_dssp -TTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHHHCC-
T ss_pred -CCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999987653 2457 99999999999876543
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-25 Score=185.43 Aligned_cols=202 Identities=12% Similarity=0.102 Sum_probs=144.3
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCc--chHHHHHH---HHHHHhcCcHHHH---------HHhcC
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDE--SEVPRMCL---ELYREHGTTMAGL---------KAVGY 85 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~---~~~~~~~~~~~~~---------~~~~~ 85 (274)
++|+|+||+||||+|+...+...+.+++.. +...|+.. .....+.. ......|...... ...+.
T Consensus 12 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 89 (251)
T 2pke_A 12 AIQLVGFDGDDTLWKSEDYYRTAEADFEAI--LSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEA 89 (251)
T ss_dssp SCCEEEECCBTTTBCCHHHHHHHHHHHHHH--HTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTT
T ss_pred ceeEEEEeCCCCCccCcHhHHHHHHHHHHH--HHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCC
Confidence 589999999999999888887776654332 24566654 11111111 1112334433221 11222
Q ss_pred CCChHH---HHHHHhccCCCCCCCCChhHHHHHHhC--CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCC
Q 024023 86 EFDNDE---FHAFVHGKLPYEKLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQ 160 (274)
Q Consensus 86 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~L~~l--~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~ 160 (274)
...... +.+.+.... .....++|++.++|+.+ +.+++++|++....+...++.+|+..+|+.+++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~------- 161 (251)
T 2pke_A 90 RIEARDIQRIVEIGRATL-QHPVEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVVS------- 161 (251)
T ss_dssp CCCHHHHHHHHHHHHHHH-TCCCCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEES-------
T ss_pred CCChHHHHHHHHHHHHHH-hccCCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeeeC-------
Confidence 222222 222222211 34567899999998887 57899999999999999999999999999988742
Q ss_pred CCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC---------
Q 024023 161 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------- 230 (274)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------- 230 (274)
||+++++..+++++|++|++|++|||+. ||+.+|+++|+.++++.++..
T Consensus 162 ---------------------kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~ 220 (251)
T 2pke_A 162 ---------------------EKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGV 220 (251)
T ss_dssp ---------------------CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-----------
T ss_pred ---------------------CCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCcccccccccc
Confidence 9999999999999999999999999999 999999999999999977642
Q ss_pred -CCCccc-cccCHhHHHHHHHHHH
Q 024023 231 -VPPADH-ALNSIHNIKEAIPEIW 252 (274)
Q Consensus 231 -~~~a~~-~~~~l~~l~~~l~~~~ 252 (274)
...+++ +++++.+|.++|..+.
T Consensus 221 ~~~~~~~~~i~~~~el~~~l~~~~ 244 (251)
T 2pke_A 221 AADEPRLREVPDPSGWPAAVRALD 244 (251)
T ss_dssp --CCTTEEECSSGGGHHHHHHHHH
T ss_pred ccCCCCeeeeCCHHHHHHHHHHhC
Confidence 246887 9999999999887765
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=183.02 Aligned_cols=127 Identities=17% Similarity=0.334 Sum_probs=114.2
Q ss_pred CCCCCChhHHHHHHhC-CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 103 EKLKPDPVLRNLLLSM-PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l-~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
....++|++.++|+.+ +.+++|+|+++...+...++.+|+..+|+.++++++.+..
T Consensus 90 ~~~~~~~~~~~~l~~l~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~----------------------- 146 (253)
T 1qq5_A 90 NRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVF----------------------- 146 (253)
T ss_dssp GSCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCC-----------------------
T ss_pred hcCCCCccHHHHHHHHcCCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCC-----------------------
Confidence 3467899999999988 6889999999999999999999999999999999988764
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECC-----------------------CC-----CCCC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS-----------------------SV-----PVPP 233 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~-----------------------~~-----~~~~ 233 (274)
||+|+.+..+++++|++|++|++|||+.+|+.+|+++|+.++++++ +. ....
T Consensus 147 Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~ 226 (253)
T 1qq5_A 147 KPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEA 226 (253)
T ss_dssp TTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCC
T ss_pred CCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCC
Confidence 9999999999999999999999999999999999999999999987 21 1457
Q ss_pred ccccccCHhHHHHHHHHHH
Q 024023 234 ADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 234 a~~~~~~l~~l~~~l~~~~ 252 (274)
++++++++.+|.++|..+.
T Consensus 227 ~~~~~~~~~el~~~l~~~~ 245 (253)
T 1qq5_A 227 PDFVVPALGDLPRLVRGMA 245 (253)
T ss_dssp CSEEESSGGGHHHHHHHHC
T ss_pred CCeeeCCHHHHHHHHHHhc
Confidence 9999999999999887654
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4e-25 Score=184.02 Aligned_cols=127 Identities=20% Similarity=0.323 Sum_probs=114.2
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 104 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
...++|++.++|+.++ .+++++|+++...+...++.+|+..+|+.++++++.+..
T Consensus 98 ~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~----------------------- 154 (234)
T 3u26_A 98 YGELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFF----------------------- 154 (234)
T ss_dssp HCCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBC-----------------------
T ss_pred hCCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCC-----------------------
Confidence 4578899999998885 678899999999999999999999999999999987764
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHHHHHHHHHHh
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
||++.++..+++++|++|+++++|||+. ||+.+|+++|++++++.++.. ...++++++++.+|.++|..+..
T Consensus 155 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l~~~~~ 231 (234)
T 3u26_A 155 KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDELNG 231 (234)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHHHHHHC-
T ss_pred CcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999998 999999999999999988764 23799999999999998877643
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=180.88 Aligned_cols=192 Identities=18% Similarity=0.240 Sum_probs=140.4
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhc-CcHHH-HHHh--cCCCChH---HH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHG-TTMAG-LKAV--GYEFDND---EF 92 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~-~~~~--~~~~~~~---~~ 92 (274)
++|+|+||+||||+++...+...+.++ .+..|..... .. .....+ ..... +..+ ....... .+
T Consensus 3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~-----~~~~g~~~~~-~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (207)
T 2go7_A 3 QKTAFIWDLDGTLLDSYEAILSGIEET-----FAQFSIPYDK-EK----VREFIFKYSVQDLLVRVAEDRNLDVEVLNQV 72 (207)
T ss_dssp -CCEEEECTBTTTEECHHHHHHHHHHH-----HHHHTCCCCH-HH----HHHHHHHSCHHHHHHHHHHHHTCCHHHHHHH
T ss_pred cccEEEEeCCCcccccHHHHHHHHHHH-----HHHcCCCCCH-HH----HHHHHccccHHHHHHHhhchhhccHHHHHHH
Confidence 579999999999999888777766653 3344553321 11 111122 11111 1110 0011111 12
Q ss_pred HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccc
Q 024023 93 HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 169 (274)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~ 169 (274)
...+... ......++|++.++|+.+ +.+++++|++...... .++.+|+..+|+.++++++.+..
T Consensus 73 ~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~----------- 139 (207)
T 2go7_A 73 RAQSLAE-KNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVR----------- 139 (207)
T ss_dssp HHHHHTT-CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCC-----------
T ss_pred HHHHHHh-ccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCC-----------
Confidence 2222221 124567889999988877 5889999999998888 99999999999999999887764
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHH
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 248 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l 248 (274)
||+++.+..+++++|++++++++|||+.||++|++.+|+.++++.++. . .++++++++.+|.++|
T Consensus 140 ------------Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-~a~~v~~~~~el~~~l 204 (207)
T 2go7_A 140 ------------KPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-EGNHRIQALADISRIF 204 (207)
T ss_dssp ------------TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-TTEEECSSTTHHHHHT
T ss_pred ------------CCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-CCCEEeCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999998887 4 8999999999998765
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=186.17 Aligned_cols=199 Identities=13% Similarity=0.146 Sum_probs=135.7
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCc-------------HHHHHHhcCC
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTT-------------MAGLKAVGYE 86 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~ 86 (274)
++|+|+||+||||+|+...+..++.+ .++..|.+... ..+...+....|.. ...+...+..
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~-~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGFKPVFYEKVYQ-----VLKDNGYDLDL-RKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIY 75 (220)
T ss_dssp CCCEEEECSBTTTEEEEETTHHHHHH-----HHHHTTCCCCH-HHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCC
T ss_pred CceEEEEcCCCceecccccHHHHHHH-----HHHHhCCCCCH-HHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCC
Confidence 57899999999999988777766664 45566766432 12222222222221 1223334444
Q ss_pred CChHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCC
Q 024023 87 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 163 (274)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~ 163 (274)
...+....+...........++||+.++|+.| |.+++|+||++. .+...++.+|+.++|+.++++++.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~----- 149 (220)
T 2zg6_A 76 PSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAV----- 149 (220)
T ss_dssp CCHHHHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-------------
T ss_pred CcHHHHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCC-----
Confidence 33333333333222223567899999998887 478999999976 478899999999999999999988765
Q ss_pred CCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChh-cHHHHHHcCCeEEEECCCCCCCCccccccCHh
Q 024023 164 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVPVPPADHALNSIH 242 (274)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~-Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~ 242 (274)
||+|+.+..+++++|++| ++|||+.+ |+.+|+++|+.++++.++......+++++++.
T Consensus 150 ------------------Kp~~~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~i~~l~ 208 (220)
T 2zg6_A 150 ------------------KPNPKIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDVRDRVKNLR 208 (220)
T ss_dssp ---------------------CCHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTCCSCBSSHH
T ss_pred ------------------CCCHHHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCcceEECCHH
Confidence 999999999999999988 99999998 99999999999999976533222267899999
Q ss_pred HHHHHHHHH
Q 024023 243 NIKEAIPEI 251 (274)
Q Consensus 243 ~l~~~l~~~ 251 (274)
+|.++|..+
T Consensus 209 el~~~l~~~ 217 (220)
T 2zg6_A 209 EALQKIEEM 217 (220)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999887664
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-24 Score=178.45 Aligned_cols=197 Identities=14% Similarity=0.159 Sum_probs=138.3
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHH---HHHhcCcHHH---------HHHhcCCCC
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL---YREHGTTMAG---------LKAVGYEFD 88 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~---------~~~~~~~~~ 88 (274)
+|+|+||+||||+++...+.....+.+.. +...|........+.... ....+..... ....+....
T Consensus 8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPFFQEVEKQYTDL--LKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKIA 85 (234)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHH--TGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCCC
T ss_pred ccEEEEeCCCCCccCcchHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCCC
Confidence 89999999999999888776665542222 333442211111111000 0112222111 112233344
Q ss_pred hHHHHHH---HhccCCCCCCCCChhHHHHHHhC---C-CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCC
Q 024023 89 NDEFHAF---VHGKLPYEKLKPDPVLRNLLLSM---P-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 161 (274)
Q Consensus 89 ~~~~~~~---~~~~~~~~~~~~~~~~~~~L~~l---~-~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~ 161 (274)
.+...+. +.+.. .....++|++.++|+.+ + .+++++|+++...+...++.+|+.++|+.+++..
T Consensus 86 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~-------- 156 (234)
T 3ddh_A 86 ADIIRQIVDLGKSLL-KMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMS-------- 156 (234)
T ss_dssp HHHHHHHHHHHHHHT-TCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEES--------
T ss_pred HHHHHHHHHHHHHHh-hccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeecC--------
Confidence 4333322 22222 24568899999998887 5 8899999999999999999999999999988753
Q ss_pred CCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCC----C-----C
Q 024023 162 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV----P-----V 231 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~----~-----~ 231 (274)
||++.++..+++++|++|+++++|||+. ||+.+|+++|++++++.++. . .
T Consensus 157 --------------------kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~ 216 (234)
T 3ddh_A 157 --------------------DKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFA 216 (234)
T ss_dssp --------------------CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCC
T ss_pred --------------------CCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCccccc
Confidence 9999999999999999999999999997 99999999999999994443 2 2
Q ss_pred CCccccccCHhHHHHHH
Q 024023 232 PPADHALNSIHNIKEAI 248 (274)
Q Consensus 232 ~~a~~~~~~l~~l~~~l 248 (274)
..++++++++.+|.++|
T Consensus 217 ~~~d~v~~~l~el~~~l 233 (234)
T 3ddh_A 217 HERLKQVKRLDDLLSLL 233 (234)
T ss_dssp CTTEEECSSGGGHHHHC
T ss_pred CCCceecccHHHHHHhc
Confidence 34599999999998764
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-25 Score=183.63 Aligned_cols=202 Identities=16% Similarity=0.175 Sum_probs=142.1
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcch---------HHHHHHHHHHHhcCcHH----HHHHhcCC
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESE---------VPRMCLELYREHGTTMA----GLKAVGYE 86 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~~~~~~~----~~~~~~~~ 86 (274)
++|+|+||+||||+|+...+...+.+++.+. .|.+... .......+...++.... .....
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 75 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEV----YGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKA--- 75 (234)
T ss_dssp CCEEEEECCBTTTEEECTHHHHHHHHHHHHH----HSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHH---
T ss_pred cceEEEEcCCCCcccCccchHHHHHHHHHHH----hCCCCccchhhhcCCChHHHHHHHHHHcCCCcccchhHHHHH---
Confidence 5799999999999998888777776544331 3333220 00101111222221110 00000
Q ss_pred CChHHHHHHHhccCCCCCCCCChhHHHHHHhC----CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC
Q 024023 87 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM----PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 162 (274)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l----~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~ 162 (274)
...+...+..........++|++.++|+.+ +.+++|+|++....+...++.+|+..+|+.++++++....
T Consensus 76 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---- 149 (234)
T 2hcf_A 76 --KETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDR---- 149 (234)
T ss_dssp --HHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSG----
T ss_pred --HHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCc----
Confidence 111122222211113457789999988876 4678999999999999999999999999987777765432
Q ss_pred CCCCcccccccCcccccCCCCCHHHHHHHHHHhC--CCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCc
Q 024023 163 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN--VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPA 234 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g--~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a 234 (274)
+||.+.++..+++++| ++|++|++|||+.||+.+|+++|+.++++.++.. ...+
T Consensus 150 ------------------~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a 211 (234)
T 2hcf_A 150 ------------------NELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKP 211 (234)
T ss_dssp ------------------GGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCC
T ss_pred ------------------cchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCC
Confidence 3688999999999999 9999999999999999999999999999988764 2358
Q ss_pred cccccCHhHHHHHHHHHH
Q 024023 235 DHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 235 ~~~~~~l~~l~~~l~~~~ 252 (274)
++++.++.+|.++|..+.
T Consensus 212 ~~v~~~~~el~~~l~~~~ 229 (234)
T 2hcf_A 212 GTLFKNFAETDEVLASIL 229 (234)
T ss_dssp SEEESCSCCHHHHHHHHH
T ss_pred CEEeCCHHhHHHHHHHHh
Confidence 999999999999887765
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-25 Score=183.71 Aligned_cols=120 Identities=23% Similarity=0.349 Sum_probs=107.4
Q ss_pred CCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 103 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
....++|++.++|+.++ .+++++||++.. ++.+|+..+|+.++++++.+..
T Consensus 102 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~~---------------------- 154 (230)
T 3vay_A 102 HQVQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGIG---------------------- 154 (230)
T ss_dssp TCCCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTCC----------------------
T ss_pred ccCccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcHHHeeeeEEccccCCC----------------------
Confidence 45678999999998874 788999998766 6788999999999999988764
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPE 250 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l~~~l~~ 250 (274)
||+++++..+++++|++|+++++|||+. +|+.+|+++|++++++.++.. ...++++++++.+|.++|.+
T Consensus 155 -kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~ 228 (230)
T 3vay_A 155 -KPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLAR 228 (230)
T ss_dssp -TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHHHT
T ss_pred -CcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHHHh
Confidence 9999999999999999999999999998 999999999999999987765 46799999999999998764
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-25 Score=184.77 Aligned_cols=202 Identities=20% Similarity=0.183 Sum_probs=140.0
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHH-hcCCCChHH------
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA-VGYEFDNDE------ 91 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------ 91 (274)
|++|+|+||+||||+++...+...+.+ ..+..|........ +....|........ .........
T Consensus 4 M~~k~v~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 74 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRGIVTCFRS-----VLERHGYTGITDDM----IKRTIGKTLEESFSILTGITDADQLESFRQ 74 (225)
T ss_dssp -CCSEEEECCBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHH----HHTTTTSCHHHHHHHHHCCCCHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCHHHHHHHHHH-----HHHHhCCCCCCHHH----HHHHhCCcHHHHHHHHcCCCCHHHHHHHHH
Confidence 357999999999999988777776665 44455554322111 11122332221111 100011111
Q ss_pred -HHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCc
Q 024023 92 -FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 167 (274)
Q Consensus 92 -~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~ 167 (274)
+...+.... .....++|++.++++.+ +.+++++|+.........++.+|+..+|+.++++++.+..
T Consensus 75 ~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 144 (225)
T 3d6j_A 75 EYSKEADIYM-NANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHH--------- 144 (225)
T ss_dssp HHHHHHHHHT-GGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSC---------
T ss_pred HHHHHHHHhc-cccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCC---------
Confidence 111111111 23456789999988877 5889999999999999999999999999999998877654
Q ss_pred ccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCH
Q 024023 168 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSI 241 (274)
Q Consensus 168 ~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l 241 (274)
||++.++..+++++|++++++++|||+.||+.|++.+|++++++.++.. ..+++++++++
T Consensus 145 --------------k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~ 210 (225)
T 3d6j_A 145 --------------KPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTL 210 (225)
T ss_dssp --------------TTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSG
T ss_pred --------------CCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCH
Confidence 9999999999999999999999999999999999999999999987654 22489999999
Q ss_pred hHHHHHHHHHHh
Q 024023 242 HNIKEAIPEIWE 253 (274)
Q Consensus 242 ~~l~~~l~~~~~ 253 (274)
.+|.++|+.+..
T Consensus 211 ~el~~~l~~~~~ 222 (225)
T 3d6j_A 211 GQLISVPEDKSG 222 (225)
T ss_dssp GGGC--------
T ss_pred HHHHHhhhhhcC
Confidence 999998876653
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=184.65 Aligned_cols=199 Identities=11% Similarity=0.069 Sum_probs=142.7
Q ss_pred CCccEEEEecCCCccCCch-hHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH---------------HHHH
Q 024023 19 ANYECLLFDLDDTLYPLST-GFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA---------------GLKA 82 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------------~~~~ 82 (274)
|++|+|+||+||||+|+.. .+...+.+ .+++.|+..... .+....|.... ....
T Consensus 4 m~ik~i~fDlDGTLld~~~~~~~~~~~~-----~l~~~G~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 73 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFAPLEVFME-----IFHKRGVAITAE-----EARKPMGLLKIDHVRALTEMPRIASEWNRV 73 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCTTHHHHHH-----HHHTTTCCCCHH-----HHHTTTTSCHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCceEEEEecCCCEEeCCCccHHHHHHH-----HHHHcCCCCCHH-----HHHHHhccchHHHHHHhcccHHHHHHHHHH
Confidence 4589999999999999777 56666665 344456543210 01111111110 0111
Q ss_pred hcCCCChHHHHH-------HHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc-ceeEe
Q 024023 83 VGYEFDNDEFHA-------FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF-EGIIC 151 (274)
Q Consensus 83 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f-d~i~~ 151 (274)
.+.....+.+.. .+.. .......++|++.++|+.+ +.+++++|+.+...+...++.+|+..+| +.+++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~ 152 (267)
T 1swv_A 74 FRQLPTEADIQEMYEEFEEILFA-ILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVT 152 (267)
T ss_dssp HSSCCCHHHHHHHHHHHHHHHHH-HGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBC
T ss_pred hCCCCCHHHHHHHHHHHHHHHHH-hhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheec
Confidence 222233222211 1111 1123457789999888776 5889999999999899999998888886 88888
Q ss_pred cccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCC-CeEEEEcCChhcHHHHHHcCCeEEEECCCCC
Q 024023 152 FETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~-~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~ 230 (274)
+++.... ||++.++..+++++|+++ +++++|||+.||+.||+.+|+.++++.++..
T Consensus 153 ~~~~~~~-----------------------kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~ 209 (267)
T 1swv_A 153 PDDVPAG-----------------------RPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSS 209 (267)
T ss_dssp GGGSSCC-----------------------TTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred CCccCCC-----------------------CCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCC
Confidence 8877654 999999999999999999 9999999999999999999999999988764
Q ss_pred -----------------------------CCCccccccCHhHHHHHHHHH
Q 024023 231 -----------------------------VPPADHALNSIHNIKEAIPEI 251 (274)
Q Consensus 231 -----------------------------~~~a~~~~~~l~~l~~~l~~~ 251 (274)
..+|+++++++.+|.++|..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~ 259 (267)
T 1swv_A 210 ELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHI 259 (267)
T ss_dssp TTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred ccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHHHHH
Confidence 245999999999999987654
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-24 Score=177.50 Aligned_cols=195 Identities=17% Similarity=0.169 Sum_probs=139.0
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcCC-CChHHHH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYE-FDNDEFH 93 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~ 93 (274)
++|+|+||+||||+++...+...+.+ .+++.|.+...... +....|..... ....+.. .....+.
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRRNE----LPDTLGLRIDMVVDLWYARQPWNGPSRQEVV 78 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHH-----HHHHTTCCGGGGGG----SCCCTTCCHHHHHHHHHHHSCCSSSCHHHHH
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHH-----HHHHcCCCCChHHH----HHHHhCCCHHHHHHHHHHHcCCCccCHHHHH
Confidence 47999999999999988877766654 34445554321000 00001111110 0111111 1122211
Q ss_pred H----HHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 94 A----FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 94 ~----~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
. .+.+.. .....++|++.++|+.+ +.+++++|+.....+...++.+|+..+|+.++++++.+..
T Consensus 79 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------- 149 (226)
T 1te2_A 79 ERVIARAISLV-EETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYS-------- 149 (226)
T ss_dssp HHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCC--------
T ss_pred HHHHHHHHHHH-hccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCC--------
Confidence 1 111111 12356788998888776 5889999999999999999999999999999998887764
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCccccccCH
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSI 241 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~~~l 241 (274)
||++.++..+++++|++++++++|||+.||++|++.+|++++++.++.. ...|++++.++
T Consensus 150 ---------------kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~ 214 (226)
T 1te2_A 150 ---------------KPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSL 214 (226)
T ss_dssp ---------------TTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCG
T ss_pred ---------------CCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCH
Confidence 9999999999999999999999999999999999999999999987753 45699999999
Q ss_pred hHHHHH
Q 024023 242 HNIKEA 247 (274)
Q Consensus 242 ~~l~~~ 247 (274)
.+|.+.
T Consensus 215 ~el~~~ 220 (226)
T 1te2_A 215 TELTAK 220 (226)
T ss_dssp GGCCHH
T ss_pred HHHhHH
Confidence 998763
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-24 Score=184.20 Aligned_cols=117 Identities=13% Similarity=0.139 Sum_probs=102.8
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHH---cCCCCccceeEecccCCCCCCCCCCCCcccccccCcc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGR---LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 176 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~---~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (274)
....++||+.++|+.| |.+++|+||++......+++. .|+..+|+.++++ +++ .
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~------------------ 186 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-H------------------ 186 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-C------------------
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-C------------------
Confidence 4568999999999888 589999999999988888885 4699999999988 777 6
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCC------CCccccccCHhHH
Q 024023 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV------PPADHALNSIHNI 244 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~------~~a~~~~~~l~~l 244 (274)
||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++... ..++++++++.+|
T Consensus 187 -----KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el 255 (261)
T 1yns_A 187 -----KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 255 (261)
T ss_dssp -----TTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred -----CCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHh
Confidence 99999999999999999999999999999999999999999999764431 3478888888876
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.4e-24 Score=173.97 Aligned_cols=120 Identities=22% Similarity=0.283 Sum_probs=107.3
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
..++||+.+ |+.|+ .+++|+|+++...+...++.+|+..+|+.++++++.+.. |
T Consensus 73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~-----------------------K 128 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEY-----------------------K 128 (201)
T ss_dssp CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCC-----------------------T
T ss_pred cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCC-----------------------C
Confidence 577888888 77764 789999999999999999999999999999999888764 9
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCccccccCHhHHHHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKEAIPE 250 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~~~l~~l~~~l~~ 250 (274)
|+|+++..+++++| |+++++|||+.+|+.+|+++|+.++++.++.. ...++++++++.+|.++|..
T Consensus 129 p~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 199 (201)
T 2w43_A 129 PSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWILR 199 (201)
T ss_dssp TCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHHHHh
Confidence 99999999999999 99999999999999999999999999987643 34689999999999987754
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.7e-24 Score=172.33 Aligned_cols=176 Identities=20% Similarity=0.314 Sum_probs=127.2
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHh--c-CcHHH-HHHh----cCCCChHH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREH--G-TTMAG-LKAV----GYEFDNDE 91 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~-~~~~~-~~~~----~~~~~~~~ 91 (274)
++|+|+||+||||+|+.. ....+.. ..+..|.+..............+ + ..... +... +.....+.
T Consensus 3 ~~k~viFDlDGTL~d~~~-~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTNGW-DREQRAD-----VAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPED 76 (200)
T ss_dssp CCCEEEECCBTTTBCCSS-CHHHHHH-----HHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHHH
T ss_pred CceEEEEeCCCeeECCCc-chHHHHH-----HHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHHH
Confidence 579999999999999664 3333332 45566765443322222222222 1 11111 1111 11223334
Q ss_pred HHHHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccc
Q 024023 92 FHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 169 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~ 169 (274)
+.+.+. ....++|++.++|+.++ .+++++|+++...+...++.+|+..+|+.++++++.+..
T Consensus 77 ~~~~~~-----~~~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~----------- 140 (200)
T 3cnh_A 77 FRAVME-----EQSQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVM----------- 140 (200)
T ss_dssp HHHHHH-----HTCCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCC-----------
T ss_pred HHHHHH-----hcCccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCC-----------
Confidence 444332 23458999999988873 289999999999999999999999999999999887764
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||+|+.+..+++++|++|+++++|||+.+|+.+|+++|+.++++.++.
T Consensus 141 ------------Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 188 (200)
T 3cnh_A 141 ------------KPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAA 188 (200)
T ss_dssp ------------TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCHH
T ss_pred ------------CCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCch
Confidence 999999999999999999999999999999999999999999997753
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=172.89 Aligned_cols=190 Identities=17% Similarity=0.212 Sum_probs=134.0
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCC-cchHHHHHHHHHHHhcCcHH-----HHHHhcCCCChHHHH-
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHID-ESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFH- 93 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~- 93 (274)
+|+|+||+||||+|+...+...+.+ ..+..|.. .... ......|.... .+...+...+.+...
T Consensus 2 ~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEYHFRAWKA-----LAEEIGINGVDRQ-----FNEQLKGVSREDSLQKILDLADKKVSAEEFKE 71 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHH-----HHHHTTCCCCSHH-----HHTTTTTCCHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred CcEEEECCCCcccCChHHHHHHHHH-----HHHHcCCCCCCHH-----HHHHhCCCCHHHHHHHHHHHhCCCCChHHHHH
Confidence 6899999999999977777766665 34445554 2110 00111122111 111122222322221
Q ss_pred ------HHHhccCC-CCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCC
Q 024023 94 ------AFVHGKLP-YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 163 (274)
Q Consensus 94 ------~~~~~~~~-~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~ 163 (274)
..+..... .....++|++.++|+.+ +.+++++|+. ......++.+|+..+|+.++++++.+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~----- 144 (221)
T 2wf7_A 72 LAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAAS----- 144 (221)
T ss_dssp HHHHHHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSC-----
T ss_pred HHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCC-----
Confidence 11111111 12456789999888876 5889999988 4566788889999999999999887764
Q ss_pred CCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhH
Q 024023 164 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHN 243 (274)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~ 243 (274)
||+|+++..+++++|++|+++++|||+.||++||+.+|+++++++.......+++++.++.+
T Consensus 145 ------------------Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~a~~v~~~~~e 206 (221)
T 2wf7_A 145 ------------------KPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSH 206 (221)
T ss_dssp ------------------TTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHCSSSEEESSGGG
T ss_pred ------------------CCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhccccchhcCHHh
Confidence 99999999999999999999999999999999999999999999764443489999999999
Q ss_pred HH
Q 024023 244 IK 245 (274)
Q Consensus 244 l~ 245 (274)
+.
T Consensus 207 l~ 208 (221)
T 2wf7_A 207 YT 208 (221)
T ss_dssp CC
T ss_pred CC
Confidence 74
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=173.15 Aligned_cols=115 Identities=12% Similarity=0.208 Sum_probs=96.8
Q ss_pred CCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHc-----------CCCCccceeEecccC-CCCCCCCCCCCccccc
Q 024023 104 KLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL-----------GLEDCFEGIICFETI-NPRLQPADNTDGIENN 171 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~-----------gl~~~fd~i~~~~~~-~~~~~~~~~~~~~~~~ 171 (274)
...++||+.++|+. |.+++|+||++...+...++.. |+..+|+.++.. .+ +
T Consensus 123 ~~~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~-~~~g--------------- 185 (253)
T 2g80_A 123 KAPVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI-NTSG--------------- 185 (253)
T ss_dssp CBCCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH-HHHC---------------
T ss_pred cCCCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEee-eccC---------------
Confidence 46789999999999 9999999999999999988876 466777776654 22 2
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-C---CCccccccCHhHH
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-V---PPADHALNSIHNI 244 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~---~~a~~~~~~l~~l 244 (274)
+||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.++++.+... . ..++++++++.+|
T Consensus 186 ---------~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 186 ---------KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 253 (253)
T ss_dssp ---------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred ---------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence 39999999999999999999999999999999999999999999976332 1 2267888887764
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=171.72 Aligned_cols=122 Identities=16% Similarity=0.167 Sum_probs=104.1
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
....++||+.++|+.| |++++|+|+.....+...+ + .+|+.++++++....
T Consensus 33 ~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~--~~~d~v~~~~~~~~~--------------------- 86 (196)
T 2oda_A 33 EHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A--PVNDWMIAAPRPTAG--------------------- 86 (196)
T ss_dssp GGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T--TTTTTCEECCCCSSC---------------------
T ss_pred ccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C--ccCCEEEECCcCCCC---------------------
Confidence 3457889999999988 5899999999888774433 3 468999999988764
Q ss_pred CCCCCHHHHHHHHHHhCCCC-CeEEEEcCChhcHHHHHHcCCeEEEECCCCC----------------------------
Q 024023 180 LCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP---------------------------- 230 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~-~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~---------------------------- 230 (274)
||+|+.+..+++++|+.+ ++|++|||+.+|+.+|+++|+.++++.++..
T Consensus 87 --KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l 164 (196)
T 2oda_A 87 --WPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKL 164 (196)
T ss_dssp --TTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred --CCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHH
Confidence 999999999999999975 8999999999999999999999999988753
Q ss_pred -CCCccccccCHhHHHHHHHHHH
Q 024023 231 -VPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 231 -~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
..+++++++++.+|.++|..+.
T Consensus 165 ~~~~~d~vi~~~~eL~~~l~~~~ 187 (196)
T 2oda_A 165 YSLGVHSVIDHLGELESCLADIA 187 (196)
T ss_dssp HHTTCSEEESSGGGHHHHHHHHH
T ss_pred HHcCCCEEeCCHHHHHHHHHHHH
Confidence 2468999999999998886654
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.90 E-value=6.4e-23 Score=171.04 Aligned_cols=175 Identities=23% Similarity=0.268 Sum_probs=127.0
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHH-----HHHHh--cC-cHH-----HHHHhcC
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLE-----LYREH--GT-TMA-----GLKAVGY 85 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~--~~-~~~-----~~~~~~~ 85 (274)
+++|+|+||+||||+++... .+.+ .++..|++... ..... .+..+ |. ... .....+.
T Consensus 26 ~~ik~viFD~DGTL~d~~~~---~~~~-----~~~~~g~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 95 (229)
T 4dcc_A 26 KGIKNLLIDLGGVLINLDRE---RCIE-----NFKKIGFQNIE--EKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGK 95 (229)
T ss_dssp CCCCEEEECSBTTTBCBCHH---HHHH-----HHHHHTCTTHH--HHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTS
T ss_pred CCCCEEEEeCCCeEEeCChH---HHHH-----HHHHhCCCcHH--HHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCC
Confidence 45899999999999996532 1211 33445554221 11111 11111 11 111 1222355
Q ss_pred CCChHHHHHHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHH------HHcCCCCccceeEecccCCC
Q 024023 86 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVL------GRLGLEDCFEGIICFETINP 157 (274)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l------~~~gl~~~fd~i~~~~~~~~ 157 (274)
....+.+.+.+.... ..++|++.++|+.|+ .+++|+||++.......+ +.+|+..+|+.++++++.+.
T Consensus 96 ~~~~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~ 171 (229)
T 4dcc_A 96 MVSDKQIDAAWNSFL----VDIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKM 171 (229)
T ss_dssp CCCHHHHHHHHHTTB----CCCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTC
T ss_pred CCCHHHHHHHHHHHH----HhccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCC
Confidence 556666666654432 246799999999885 788999999999888555 77788899999999998887
Q ss_pred CCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC
Q 024023 158 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~ 230 (274)
. ||+|+++..+++++|++|++|++|||+.+|+.+|+++|+.+++++++..
T Consensus 172 ~-----------------------KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~ 221 (229)
T 4dcc_A 172 A-----------------------KPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGED 221 (229)
T ss_dssp C-----------------------TTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred C-----------------------CCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHH
Confidence 5 9999999999999999999999999999999999999999999988754
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.6e-23 Score=166.13 Aligned_cols=126 Identities=15% Similarity=0.265 Sum_probs=111.4
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCCh---HHHHHHHHHcCCCCccceeEecccC----CCCCCCCCCCCcccccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETI----NPRLQPADNTDGIENNS 172 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~---~~~~~~l~~~gl~~~fd~i~~~~~~----~~~~~~~~~~~~~~~~~ 172 (274)
....++||+.++|+.| |.+++|+||++. ..+...++.+|+..+|+.++++++. +.
T Consensus 31 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~--------------- 95 (189)
T 3ib6_A 31 PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKM--------------- 95 (189)
T ss_dssp TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCC---------------
T ss_pred CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCC---------------
Confidence 4467899999998888 589999999887 8899999999999999999999875 44
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCC-hhcHHHHHHcCCeEEEECCCCC--------CCCcccccc--CH
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP--------VPPADHALN--SI 241 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs-~~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~--~l 241 (274)
+||+|+.+..+++++|++|+++++|||+ .+|+.+|+++|+.++++.++.. ...++++++ ++
T Consensus 96 --------~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l 167 (189)
T 3ib6_A 96 --------EKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDL 167 (189)
T ss_dssp --------CTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSG
T ss_pred --------CCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccH
Confidence 4999999999999999999999999999 6999999999999999987664 127899999 99
Q ss_pred hHHHHHHHHH
Q 024023 242 HNIKEAIPEI 251 (274)
Q Consensus 242 ~~l~~~l~~~ 251 (274)
.+|.++|.-+
T Consensus 168 ~~l~~~l~l~ 177 (189)
T 3ib6_A 168 ADVPEALLLL 177 (189)
T ss_dssp GGHHHHHHHH
T ss_pred HhHHHHHHHH
Confidence 9999876543
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=163.78 Aligned_cols=174 Identities=17% Similarity=0.186 Sum_probs=121.9
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-HHhcCCCC-hHHHHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAVGYEFD-NDEFHAFV 96 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~ 96 (274)
|++|+|+||+||||+|+...+...+.+ ..++.|...... ...... .+...... ........ ...+...+
T Consensus 4 M~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (190)
T 2fi1_A 4 MKYHDYIWDLGGTLLDNYETSTAAFVE-----TLALYGITQDHD-SVYQAL---KVSTPFAIETFAPNLENFLEKYKENE 74 (190)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHH-HHHHHH---HHCHHHHHHHHCTTCTTHHHHHHHHH
T ss_pred CcccEEEEeCCCCcCCCHHHHHHHHHH-----HHHHhCCCCCHH-HHHHHH---ccccHHHHHHHhhhHHHHHHHHHHHH
Confidence 357999999999999977777666664 445556654321 111111 01111111 11111101 11222222
Q ss_pred hccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccccccc
Q 024023 97 HGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 173 (274)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~ 173 (274)
.... ....++|++.++|+.+ +.+++++|+.+. .+...++.+|+..+|+.++++++.+..
T Consensus 75 ~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~~~--------------- 136 (190)
T 2fi1_A 75 AREL--EHPILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFKR--------------- 136 (190)
T ss_dssp HHHT--TSCCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCCC---------------
T ss_pred HHhc--CcCccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccCCC---------------
Confidence 2222 2223889999988877 588999998764 678889999999999999999887764
Q ss_pred CcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 174 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 174 ~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||+++.+..+++++|++ ++++|||+.||+++|+.+|+++++++++.
T Consensus 137 --------kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~ 182 (190)
T 2fi1_A 137 --------KPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIV 182 (190)
T ss_dssp --------TTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred --------CCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCC
Confidence 99999999999999998 99999999999999999999999987753
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-23 Score=178.49 Aligned_cols=190 Identities=18% Similarity=0.166 Sum_probs=136.6
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcC-CCcchHHHHHHHHHHHhcCcHHHH-HHhcC-CCChHHHH---
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLH-IDESEVPRMCLELYREHGTTMAGL-KAVGY-EFDNDEFH--- 93 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~--- 93 (274)
++|+|+||+||||+|+...+...+.+ ..+..| ..... ......|...... ..+.. ....+...
T Consensus 34 ~ik~iifDlDGTLlds~~~~~~~~~~-----~~~~~g~~~~~~------~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 102 (275)
T 2qlt_A 34 KINAALFDVDGTIIISQPAIAAFWRD-----FGKDKPYFDAEH------VIHISHGWRTYDAIAKFAPDFADEEYVNKLE 102 (275)
T ss_dssp EESEEEECCBTTTEECHHHHHHHHHH-----HHTTCTTCCHHH------HHHHCTTCCHHHHHHHHCGGGCCHHHHHHHH
T ss_pred cCCEEEECCCCCCCCCHHHHHHHHHH-----HHHHcCCCCHHH------HHHHhcCCCHHHHHHHHhccCCcHHHHHHHH
Confidence 47999999999999988777666654 455555 22111 1111123322211 11110 11111111
Q ss_pred HHHhccCCCCCCCCChhHHHHHHhC----CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccc
Q 024023 94 AFVHGKLPYEKLKPDPVLRNLLLSM----PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 169 (274)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~L~~l----~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~ 169 (274)
..+... ......++|++.++|+.+ +.+++++|++....+...++.+|+. .|+.++++++....
T Consensus 103 ~~~~~~-~~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~~----------- 169 (275)
T 2qlt_A 103 GEIPEK-YGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQG----------- 169 (275)
T ss_dssp HTHHHH-HCTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSSC-----------
T ss_pred HHHHHH-HhcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCCC-----------
Confidence 111111 124567889999888876 4678999999999999999999986 48889998887664
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHhCC-------CCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCcccc
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIANV-------DPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHA 237 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~g~-------~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~ 237 (274)
||+|+++..+++++|+ +|++|++|||+.||++||+++|+.++++.++.. ...++++
T Consensus 170 ------------kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v 237 (275)
T 2qlt_A 170 ------------KPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDII 237 (275)
T ss_dssp ------------TTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEE
T ss_pred ------------CCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEE
Confidence 9999999999999999 999999999999999999999999999988764 3469999
Q ss_pred ccCHhHHH
Q 024023 238 LNSIHNIK 245 (274)
Q Consensus 238 ~~~l~~l~ 245 (274)
++++.+|.
T Consensus 238 ~~~~~el~ 245 (275)
T 2qlt_A 238 VKNHESIR 245 (275)
T ss_dssp ESSGGGEE
T ss_pred ECChHHcC
Confidence 99999875
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=166.48 Aligned_cols=102 Identities=19% Similarity=0.261 Sum_probs=93.4
Q ss_pred CCCChhHHHHHHhC--CCcEEEEeCCChHHHHHHHHH------cCCCCccceeEecccCCCCCCCCCCCCcccccccCcc
Q 024023 105 LKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGR------LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 176 (274)
Q Consensus 105 ~~~~~~~~~~L~~l--~~~~~i~s~~~~~~~~~~l~~------~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (274)
..++|++.++|+.+ +.+++++||++...+...++. +|+..+|+.++++++.+..
T Consensus 88 ~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~------------------ 149 (211)
T 2i6x_A 88 EEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKY------------------ 149 (211)
T ss_dssp EEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCC------------------
T ss_pred cccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCC------------------
Confidence 46789999998887 488999999999999988888 7999999999999887765
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||+|+.+..+++++|++|+++++|||+.+|+.+|+++|+++++++++.
T Consensus 150 -----Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~ 197 (211)
T 2i6x_A 150 -----KPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGE 197 (211)
T ss_dssp -----TTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred -----CCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence 999999999999999999999999999999999999999999988764
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-23 Score=170.48 Aligned_cols=122 Identities=16% Similarity=0.179 Sum_probs=99.5
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
..++|++.++|+.+ |.+++++|++....+...++.+|+..+|+.+++.++.. .++..+.....+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------~~~~~~~~~~~~ 140 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDA-------------LNGLVTGHMMFS 140 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE-------------EEEEEEESCCST
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCE-------------EEeeeccCCCCC
Confidence 67899999998887 47899999999999999999999999999988665421 112223334457
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC-CCCCccccccC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHALNS 240 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~a~~~~~~ 240 (274)
|||+.++..+++++|++|+++++|||+.+|+.+|+++|+++++ +... -+..|++++.+
T Consensus 141 k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~ 199 (217)
T 3m1y_A 141 HSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINE 199 (217)
T ss_dssp THHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECS
T ss_pred CChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecc
Confidence 9999999999999999999999999999999999999999887 3222 25678888863
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-22 Score=161.69 Aligned_cols=121 Identities=17% Similarity=0.178 Sum_probs=102.2
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCCh---------------HHHHHHHHHcCCCCccceeEe-----cccCCCCCC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIIC-----FETINPRLQ 160 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~---------------~~~~~~l~~~gl~~~fd~i~~-----~~~~~~~~~ 160 (274)
...++||+.++|+.| |++++|+||++. ..+...++.+| .+|+.++. +++.+.
T Consensus 25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~--- 99 (179)
T 3l8h_A 25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCAC--- 99 (179)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSS---
T ss_pred HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCC---
Confidence 357889999988888 589999999986 66778888888 44566553 344444
Q ss_pred CCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--------CC
Q 024023 161 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------VP 232 (274)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--------~~ 232 (274)
+||+|+++..+++++|++|+++++|||+.+|+.+|+++|+.++++.++.. ..
T Consensus 100 --------------------~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~ 159 (179)
T 3l8h_A 100 --------------------RKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLP 159 (179)
T ss_dssp --------------------STTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCC
T ss_pred --------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccC
Confidence 49999999999999999999999999999999999999999999999874 26
Q ss_pred CccccccCHhHHHHHHH
Q 024023 233 PADHALNSIHNIKEAIP 249 (274)
Q Consensus 233 ~a~~~~~~l~~l~~~l~ 249 (274)
.++++++++.+|.++|.
T Consensus 160 ~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 160 EGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp TTEEEESSHHHHHHHHH
T ss_pred CCcEEecCHHHHHHHHH
Confidence 78999999999998764
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-22 Score=168.51 Aligned_cols=196 Identities=19% Similarity=0.158 Sum_probs=131.6
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchH-HHHHHHHHHHhcCc--HHHHHHh----cCCCChHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEV-PRMCLELYREHGTT--MAGLKAV----GYEFDNDE 91 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~ 91 (274)
.++|+|+||+||||+|+...+..++.+ .++.+|.+.... ......+....|.. ...+... ......+.
T Consensus 9 ~~~k~viFDlDGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 83 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHVLADLRAH-----MMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRDTRLLL 83 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHHHHHHHHH-----HHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTCTGGGG
T ss_pred CCCeEEEEcCCCCCEecHHHHHHHHHH-----HHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccchHHHH
Confidence 357899999999999988777766664 344445432210 00011222222322 1111111 11111222
Q ss_pred HHHHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccc
Q 024023 92 FHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 169 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~ 169 (274)
+.+.+... .....++||+.++|+.|+ .+++|+||++...+...++.+|+.++|+.+++..
T Consensus 84 ~~~~~~~~--~~~~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~~---------------- 145 (231)
T 2p11_A 84 MSSFLIDY--PFASRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWDEVEGRVLIY---------------- 145 (231)
T ss_dssp GHHHHHHC--CGGGGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHHHTTTCEEEE----------------
T ss_pred HHHHHHHH--HHhCCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEec----------------
Confidence 33333221 234678999999998873 2899999999999999999999999998766521
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChh---cHHHHHHcCCeEEEECCCCC--------CC-Ccccc
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSAR---NIASAKAAGLHTVIVGSSVP--------VP-PADHA 237 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~---Di~~a~~~G~~~v~v~~~~~--------~~-~a~~~ 237 (274)
++|+..+..+++ |++|++|++|||+.+ |+.+|+++|+.++++.++.. .. .++++
T Consensus 146 ------------~~K~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~ 211 (231)
T 2p11_A 146 ------------IHKELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVT 211 (231)
T ss_dssp ------------SSGGGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEE
T ss_pred ------------CChHHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCcee
Confidence 344667777766 799999999999999 99999999999999988742 12 48999
Q ss_pred ccCHhHHHHHHHHH
Q 024023 238 LNSIHNIKEAIPEI 251 (274)
Q Consensus 238 ~~~l~~l~~~l~~~ 251 (274)
++++.+|.++|..+
T Consensus 212 i~~~~el~~~l~~~ 225 (231)
T 2p11_A 212 VERIGDLVEMDAEW 225 (231)
T ss_dssp ESSGGGGGGCGGGG
T ss_pred ecCHHHHHHHHHHH
Confidence 99999998776544
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-22 Score=165.98 Aligned_cols=102 Identities=21% Similarity=0.394 Sum_probs=90.6
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHH-cCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
..++|++.++|+.+ +.+++++||++...+...++. +|+..+|+.++++++.+..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~---------------------- 147 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMR---------------------- 147 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCC----------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCC----------------------
Confidence 56889999998887 588999999988776666666 6788889999999887764
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||+|+.+..+++++|++++++++|||+.+|+.+|+++|+++++++++.
T Consensus 148 -Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 148 -KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 195 (206)
T ss_dssp -TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred -CCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence 999999999999999999999999999999999999999999998764
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-21 Score=159.91 Aligned_cols=133 Identities=18% Similarity=0.183 Sum_probs=104.2
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCC---------------hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 165 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~---------------~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~ 165 (274)
...++||+.++|+.| |++++|+||++ ...+...++.+|+. |+.++.+.+....
T Consensus 48 ~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~------- 118 (211)
T 2gmw_A 48 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQG------- 118 (211)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTC-------
T ss_pred cCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCC-------
Confidence 356789999988877 58999999999 47788899999987 7776654321000
Q ss_pred CcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeE-EEECCCCCC-----CCcccccc
Q 024023 166 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVPV-----PPADHALN 239 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~-v~v~~~~~~-----~~a~~~~~ 239 (274)
..+........+||+|+++..+++++|++|+++++|||+.+|+.+|+++|+.+ +++.++... ..++++++
T Consensus 119 ----~~~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~ 194 (211)
T 2gmw_A 119 ----SVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN 194 (211)
T ss_dssp ----SSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES
T ss_pred ----cccccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC
Confidence 00001112234699999999999999999999999999999999999999999 999887642 35899999
Q ss_pred CHhHHHHHHH
Q 024023 240 SIHNIKEAIP 249 (274)
Q Consensus 240 ~l~~l~~~l~ 249 (274)
++.+|.++|.
T Consensus 195 ~l~el~~~l~ 204 (211)
T 2gmw_A 195 SLADLPQAIK 204 (211)
T ss_dssp CGGGHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999988764
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-21 Score=160.25 Aligned_cols=130 Identities=8% Similarity=0.011 Sum_probs=103.1
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCcc-ceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~f-d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
...++||+.++|+.|+ .+++|+|++....+...++.+|+..+| +.++++++.... ..
T Consensus 67 ~~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~--------------------~~ 126 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV--------------------GY 126 (206)
T ss_dssp TCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEE--------------------EE
T ss_pred hcCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEE--------------------ee
Confidence 4678999999998885 789999999999999999999999999 566665544210 00
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcccc-ccCHhHHHHHHHHHHhh
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHA-LNSIHNIKEAIPEIWEG 254 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~-~~~l~~l~~~l~~~~~~ 254 (274)
.+|+|+.+..++++++..++++++|||+.+|+.+|+++|+++++ ..... ...++++ ++++.++.++|.++...
T Consensus 127 ~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 202 (206)
T 1rku_A 127 QLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLKASSR 202 (206)
T ss_dssp ECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHHHHCSS
T ss_pred ecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE-CCcHHHHHHHhhhccccchHHHHHHHHHHhcc
Confidence 04888999999999999999999999999999999999998764 32221 2345665 89999999988776543
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.85 E-value=9.9e-22 Score=163.25 Aligned_cols=201 Identities=11% Similarity=0.115 Sum_probs=123.7
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHH-h-cCCCChHHHHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA-V-GYEFDNDEFHAFV 96 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~ 96 (274)
+++|+|+||+||||+|+.. +. .+.+.+|.+....... .............+.. . ......+.+.+.+
T Consensus 12 ~~~k~viFD~DGTLvd~~~-~~---------~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (225)
T 1nnl_A 12 YSADAVCFDVDSTVIREEG-ID---------ELAKICGVEDAVSEMT-RRAMGGAVPFKAALTERLALIQPSREQVQRLI 80 (225)
T ss_dssp HHCSEEEEETBTTTBSSCH-HH---------HHHHHTTCTTTC-------------CHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred hhCCEEEEeCccccccccc-HH---------HHHHHhCCcHHHHHHH-HHHHcCCccHHHHHHHHHHHhcCCHHHHHHHH
Confidence 4579999999999999653 21 2455566543211110 0000000000000000 0 0112233344433
Q ss_pred hccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCC--CccceeEecccCCCCCCCCCCCCccccc
Q 024023 97 HGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADNTDGIENN 171 (274)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~--~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
.. ...+++||+.++|+.| |++++|+||++...+...++.+|+. .+|+.++..+..+. ..+
T Consensus 81 ~~----~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~-----------~~~ 145 (225)
T 1nnl_A 81 AE----QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGE-----------YAG 145 (225)
T ss_dssp HH----SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSC-----------EEE
T ss_pred Hh----ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCc-----------Eec
Confidence 32 2457899999998887 5899999999999999999999997 47877642210000 000
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHHHHH
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEA 247 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l~~~ 247 (274)
.......+..+|||+.+..+++++|+ +++++|||+.+|+.+|+++|+ +++++.... ...++++++++.++.++
T Consensus 146 ~~~~~~~~~~~~Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 146 FDETQPTAESGGKGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp ECTTSGGGSTTHHHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred CCCCCcccCCCchHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 00011112236888999999999998 789999999999999999999 777754432 24589999999998765
Q ss_pred H
Q 024023 248 I 248 (274)
Q Consensus 248 l 248 (274)
|
T Consensus 223 l 223 (225)
T 1nnl_A 223 L 223 (225)
T ss_dssp -
T ss_pred H
Confidence 5
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-21 Score=172.26 Aligned_cols=198 Identities=11% Similarity=0.098 Sum_probs=129.5
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcC-c----HHHHHHhcCCCChHHH
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGT-T----MAGLKAVGYEFDNDEF 92 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~ 92 (274)
++++|+|+||+||||+++... . .+.+..|..... ......... |. . .............+.+
T Consensus 105 ~~~~kaviFDlDGTLid~~~~-~---------~la~~~g~~~~~-~~~~~~~~~--g~~~~~~~l~~~~~~l~~~~~~~i 171 (317)
T 4eze_A 105 LPANGIIAFDMDSTFIAEEGV-D---------EIARELGMSTQI-TAITQQAME--GKLDFNASFTRRIGMLKGTPKAVL 171 (317)
T ss_dssp CCCSCEEEECTBTTTBSSCHH-H---------HHHHHTTCHHHH-HHHHHHHHT--TSSCHHHHHHHHHHTTTTCBHHHH
T ss_pred CCCCCEEEEcCCCCccCCccH-H---------HHHHHhCCcHHH-HHHHHHHhc--CCCCHHHHHHHHHHHhcCCCHHHH
Confidence 457899999999999996542 1 133444443211 111111110 11 0 0000111112233344
Q ss_pred HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccc
Q 024023 93 HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 169 (274)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~ 169 (274)
..+. ..+.++||+.++|+.| |.+++|+||+....+...++.+|+..+|+.++..++..
T Consensus 172 ~~~~------~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~------------- 232 (317)
T 4eze_A 172 NAVC------DRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNV------------- 232 (317)
T ss_dssp HHHH------HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTE-------------
T ss_pred HHHH------hCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCe-------------
Confidence 4443 2357899999998877 58999999999999999999999999999887755321
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCcccc--ccCHhHHHH
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHA--LNSIHNIKE 246 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~--~~~l~~l~~ 246 (274)
.++........+||+++.+..+++++|++|+++++|||+.+|+.+|+++|+.+++ +.... ...++++ ..++.++.+
T Consensus 233 ~tg~i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~ 311 (317)
T 4eze_A 233 LTDNITLPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLF 311 (317)
T ss_dssp EEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGG
T ss_pred eeeeEecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHH
Confidence 1222333344569999999999999999999999999999999999999998887 32221 2333443 446666655
Q ss_pred HH
Q 024023 247 AI 248 (274)
Q Consensus 247 ~l 248 (274)
+|
T Consensus 312 ~L 313 (317)
T 4eze_A 312 LI 313 (317)
T ss_dssp GT
T ss_pred HH
Confidence 43
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.3e-20 Score=152.49 Aligned_cols=107 Identities=7% Similarity=-0.001 Sum_probs=86.5
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
.++||+.++|+.| |.+++|+|++....+..+++.+|+..+|...+...+.. .++......+.++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------------~~g~~~~~~~~~~ 158 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGR-------------YTGRIEGTPSFRE 158 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTE-------------EEEEEESSCSSTH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCE-------------EeeeecCCCCcch
Confidence 5799999998877 58999999999999999999999987776544432210 1222233445568
Q ss_pred CCHHHHHHHHHHhC---CCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 183 PSLEAIETAIRIAN---VDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 183 p~~~~~~~~l~~~g---~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
+|+..+..+++++| ++|++|++||||.+|+.+++.+|+.++..
T Consensus 159 ~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 159 GKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp HHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred HHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 88999999999999 99999999999999999999999887754
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.82 E-value=7.9e-22 Score=167.04 Aligned_cols=121 Identities=15% Similarity=0.124 Sum_probs=97.6
Q ss_pred CCChhHHHHHHhC--CCcEEEEeCCChHHHHHHHHHcCCCCccc---eeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 106 KPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFE---GIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 106 ~~~~~~~~~L~~l--~~~~~i~s~~~~~~~~~~l~~~gl~~~fd---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
.++|++.++++.+ +.++ ++|+.+.......+...|+..+|+ .++++++...
T Consensus 122 ~~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 177 (259)
T 2ho4_A 122 FHYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVV----------------------- 177 (259)
T ss_dssp CBHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEEC-----------------------
T ss_pred CCHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEe-----------------------
Confidence 3678888887775 4677 888887665555556677777776 4556665554
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAIPE 250 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l~~~l~~ 250 (274)
+||+|+++..+++++|++|++|++|||+. ||+.+|+++|+.++++.++.. ...++++++++.++.+.+..
T Consensus 178 ~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~ 256 (259)
T 2ho4_A 178 GKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHILQ 256 (259)
T ss_dssp STTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHHHH
Confidence 49999999999999999999999999999 999999999999999988732 25689999999999887643
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-20 Score=158.86 Aligned_cols=128 Identities=12% Similarity=0.116 Sum_probs=99.2
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
...++||+.++|+.| |++++|+||++...+...++ |+.++ +.+++++..... +.. ....
T Consensus 75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~-------------~~~--~~~~ 136 (236)
T 2fea_A 75 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDN-------------DYI--HIDW 136 (236)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSS-------------SBC--EEEC
T ss_pred CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcC-------------Cce--EEec
Confidence 467899999999988 58999999999999988888 87666 888888765421 000 0001
Q ss_pred CCCCHHH-HH-------HHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CC-CccccccCHhHHHHH
Q 024023 181 CKPSLEA-IE-------TAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VP-PADHALNSIHNIKEA 247 (274)
Q Consensus 181 ~kp~~~~-~~-------~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~-~a~~~~~~l~~l~~~ 247 (274)
.||+|.. +. .+++++|++|+++++|||+.+|+.+|+++|+.++. ++.. .. .++++++++.+|.++
T Consensus 137 ~kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~--~~~~~~~~~~~~~~~~~~~~~el~~~ 214 (236)
T 2fea_A 137 PHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR--DYLLNECREQNLNHLPYQDFYEIRKE 214 (236)
T ss_dssp TTCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC--HHHHHHHHHTTCCEECCSSHHHHHHH
T ss_pred CCCCccccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec--hHHHHHHHHCCCCeeecCCHHHHHHH
Confidence 3787773 43 88999999999999999999999999999998863 2221 23 288999999999998
Q ss_pred HHHH
Q 024023 248 IPEI 251 (274)
Q Consensus 248 l~~~ 251 (274)
|..+
T Consensus 215 l~~~ 218 (236)
T 2fea_A 215 IENV 218 (236)
T ss_dssp HHTS
T ss_pred HHHh
Confidence 8765
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-22 Score=166.91 Aligned_cols=66 Identities=26% Similarity=0.312 Sum_probs=59.3
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCC-hhcHHHHHHcCCeEEEECCCCCC--------CCccccccCHhHHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVPV--------PPADHALNSIHNIK 245 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs-~~Di~~a~~~G~~~v~v~~~~~~--------~~a~~~~~~l~~l~ 245 (274)
.+||++.+++.+++++|++++++++|||+ .||++|++.+|++++++.++... ..|+++++++.+|.
T Consensus 174 ~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el~ 248 (250)
T 2c4n_A 174 VGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp CSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred eCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHhh
Confidence 36999999999999999999999999999 69999999999999999877531 47999999998864
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.4e-20 Score=150.79 Aligned_cols=129 Identities=15% Similarity=0.173 Sum_probs=93.7
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
..+.|++.++|+.+ |.+++++|++....+...++.+|+..+|+.++...+.. .++........+
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 141 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK-------------LTGDVEGEVLKE 141 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE-------------EEEEEECSSCST
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCE-------------EcCCcccCccCC
Confidence 45678888888776 57899999998888888889999877776544332100 000000011224
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC-CCCCccccccC--HhHHHHH
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHALNS--IHNIKEA 247 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~a~~~~~~--l~~l~~~ 247 (274)
++|+..+..+++++|+++++|++|||+.||++|++.+|+.++ +.... ....+++++.+ +.+|.++
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~-~~~~~~~~~~a~~v~~~~~~~~l~~~ 209 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA-FCAKPILKEKADICIEKRDLREILKY 209 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-ESCCHHHHTTCSEEECSSCGGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEE-ECCCHHHHhhcceeecchhHHHHHHh
Confidence 678999999999999999999999999999999999999755 43221 14678999988 8887643
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.7e-20 Score=150.95 Aligned_cols=121 Identities=14% Similarity=0.154 Sum_probs=93.2
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
....++|++.++|+.+ +.+++++|++....+... +.+|+..+++.+.+.++....
T Consensus 76 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------------------- 133 (201)
T 4ap9_A 76 EKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQG--------------------- 133 (201)
T ss_dssp GGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEE---------------------
T ss_pred HhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceEC---------------------
Confidence 3457899999998887 589999999988888888 889988776665554422110
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 251 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~ 251 (274)
.+|.+.....+++++ +++++++|||+.||+.+|+.+|+++ ++.++.. .+++++.++.++.++|+.+
T Consensus 134 -~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v-~~~~~~~--~ad~v~~~~~el~~~l~~l 199 (201)
T 4ap9_A 134 -IRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGI-AVGREIP--GADLLVKDLKELVDFIKNL 199 (201)
T ss_dssp -EECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEE-EESSCCT--TCSEEESSHHHHHHHHHTC
T ss_pred -CcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceE-EECCCCc--cccEEEccHHHHHHHHHHh
Confidence 244444456666666 8999999999999999999999985 4544444 8999999999999887654
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.9e-20 Score=170.83 Aligned_cols=101 Identities=22% Similarity=0.314 Sum_probs=85.8
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCC--ChHHHHHHHHHc--CCCCccceeEecccCCCCCCCCCCCCcccccccCccc
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNA--DQKHAMEVLGRL--GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 177 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~--~~~~~~~~l~~~--gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (274)
..++||+.++|+.| |++++|+||+ ........+... |+..+||.++++++++..
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~------------------- 159 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMV------------------- 159 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCC-------------------
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCCC-------------------
Confidence 57899999998887 5899999998 222222233332 677899999999999875
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCC
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 228 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~ 228 (274)
||+|++|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++
T Consensus 160 ----KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~ 206 (555)
T 3i28_A 160 ----KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 206 (555)
T ss_dssp ----TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSH
T ss_pred ----CCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCC
Confidence 99999999999999999999999999999999999999999998764
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-20 Score=168.98 Aligned_cols=197 Identities=15% Similarity=0.090 Sum_probs=127.0
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcC-c-HHH---HHHhcCCCChHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGT-T-MAG---LKAVGYEFDNDEFH 93 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~-~~~---~~~~~~~~~~~~~~ 93 (274)
+++|+|+||+||||++++. +. .+.+..|.... ...+...... +. . ... ....-.....+.+.
T Consensus 183 ~~~k~viFD~DgTLi~~~~-~~---------~la~~~g~~~~-~~~~~~~~~~--g~~~~~~~~~~~~~~l~~~~~~~~~ 249 (415)
T 3p96_A 183 RAKRLIVFDVDSTLVQGEV-IE---------MLAAKAGAEGQ-VAAITDAAMR--GELDFAQSLQQRVATLAGLPATVID 249 (415)
T ss_dssp TCCCEEEECTBTTTBSSCH-HH---------HHHHHTTCHHH-HHHHHHHHHT--TCSCHHHHHHHHHHTTTTCBTHHHH
T ss_pred cCCcEEEEcCcccCcCCch-HH---------HHHHHcCCcHH-HHHHHHHHhc--CCcCHHHHHHHHHHHhcCCCHHHHH
Confidence 4689999999999999652 21 23344444321 1111111111 11 0 000 01111122333333
Q ss_pred HHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccc
Q 024023 94 AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 170 (274)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~ 170 (274)
... ..+.++||+.++|+.| |++++|+||+....+...++.+|+..+|+..+...+.. .
T Consensus 250 ~~~------~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~-------------~ 310 (415)
T 3p96_A 250 EVA------GQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGT-------------L 310 (415)
T ss_dssp HHH------HHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTE-------------E
T ss_pred HHH------HhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCE-------------E
Confidence 333 2357899999998877 58999999999999999999999988877654332110 1
Q ss_pred cccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC-CCCCcccccc--CHhHHHHH
Q 024023 171 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHALN--SIHNIKEA 247 (274)
Q Consensus 171 ~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~a~~~~~--~l~~l~~~ 247 (274)
++.+.+....+||+++.+..+++++|++|+++++|||+.+|+.+|+++|+++++ +... .+..+++++. ++..+..+
T Consensus 311 tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~ 389 (415)
T 3p96_A 311 TGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFL 389 (415)
T ss_dssp EEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHH
T ss_pred EeeEccCCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHH
Confidence 122222333469999999999999999999999999999999999999999887 3222 1445666644 66666665
Q ss_pred H
Q 024023 248 I 248 (274)
Q Consensus 248 l 248 (274)
+
T Consensus 390 l 390 (415)
T 3p96_A 390 L 390 (415)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=150.85 Aligned_cols=137 Identities=13% Similarity=0.187 Sum_probs=105.5
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCCh---------------HHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~---------------~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
..++||+.++|+.| |++++|+||++. ..+...++.+|+. |+.++.+.....+
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g-------- 124 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAG-------- 124 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTC--------
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCC--------
Confidence 46788998888887 589999999988 6888899999985 6665433100000
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeE-EEECCCCC-----CCCccccccC
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP-----VPPADHALNS 240 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~-v~v~~~~~-----~~~a~~~~~~ 240 (274)
... ........+||++.++..+++++|++|+++++|||+.+|+.+|+++|+.+ +++.++.. ...+++++++
T Consensus 125 -~~~--~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~ 201 (218)
T 2o2x_A 125 -VGP--LAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSE 201 (218)
T ss_dssp -CST--TCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHH
T ss_pred -cee--ecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEeccc
Confidence 000 00111224699999999999999999999999999999999999999999 99988764 2468999999
Q ss_pred HhHHHHHHHHHHhh
Q 024023 241 IHNIKEAIPEIWEG 254 (274)
Q Consensus 241 l~~l~~~l~~~~~~ 254 (274)
+.+|.+++..+...
T Consensus 202 l~el~~~l~~~~~~ 215 (218)
T 2o2x_A 202 LGDLLAAIETLGRD 215 (218)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhcc
Confidence 99999988766443
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.9e-20 Score=150.14 Aligned_cols=124 Identities=8% Similarity=0.026 Sum_probs=90.1
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCC--CccceeEe--cccCCCCCCCCCCCCcccccccCccc
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE--DCFEGIIC--FETINPRLQPADNTDGIENNSFSSNQ 177 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~--~~fd~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (274)
..++|++.++++.+ +.+++++|++....+...++.+|+. .+|...+. .+... . .
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~-~ 141 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSF------------------K-E 141 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBE------------------E-E
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCce------------------e-c
Confidence 34778999888877 5899999999999999999999984 35543222 22110 0 0
Q ss_pred ccCCCCCHHH-HHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHhHHHHHH
Q 024023 178 RILCKPSLEA-IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAI 248 (274)
Q Consensus 178 ~~~~kp~~~~-~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~~l~~~l 248 (274)
....+|.+.. +..+.+.+|++++++++|||+.||++|+ ++|+.++++.++.. ...++++++++.+|.++|
T Consensus 142 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 142 LDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp EECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred cCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 0113665544 4445555699999999999999999998 58998877755432 346999999999998764
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.79 E-value=8.8e-21 Score=161.59 Aligned_cols=118 Identities=19% Similarity=0.182 Sum_probs=91.6
Q ss_pred CCCCChhHHHHHHhC--CCcEEEEeCCChHH--HHH-HHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 104 KLKPDPVLRNLLLSM--PQRKIIFTNADQKH--AME-VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l--~~~~~i~s~~~~~~--~~~-~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
...++|++.++|+.| +.++ |+||.+... ... .++..++..+|+.++++++.+..
T Consensus 124 ~~~~~~~~~~~l~~l~~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~-------------------- 182 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQKGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIG-------------------- 182 (264)
T ss_dssp TTCCHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECS--------------------
T ss_pred CCcCHHHHHHHHHHHhCCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccC--------------------
Confidence 456789999888876 4555 888877632 111 12223355668888877766553
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCC-hhcHHHHHHcCCeEEEECCCCCC--------CCccccccCHhHHH
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVPV--------PPADHALNSIHNIK 245 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs-~~Di~~a~~~G~~~v~v~~~~~~--------~~a~~~~~~l~~l~ 245 (274)
||+|.++..+++++|++|+++++|||+ .+|+.+|+++|+.++++.++... ..|+++++++.++.
T Consensus 183 ---KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~ 255 (264)
T 1yv9_A 183 ---KPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 255 (264)
T ss_dssp ---TTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred ---CCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHh
Confidence 999999999999999999999999999 59999999999999999887641 16899999998864
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.1e-19 Score=144.71 Aligned_cols=99 Identities=16% Similarity=0.238 Sum_probs=89.2
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCC-hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNAD-QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~-~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
....++|++.++|+.| |.+++|+||++ ...+...++.+|+..+|+.++...
T Consensus 65 ~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~------------------------- 119 (187)
T 2wm8_A 65 QDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYP------------------------- 119 (187)
T ss_dssp CEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESS-------------------------
T ss_pred cccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEe-------------------------
Confidence 3467889999999888 58999999999 689999999999999999876543
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+|+++.+..+++++|++|+++++|||+.+|+.+|+++|+.++++.++.
T Consensus 120 ---~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~ 167 (187)
T 2wm8_A 120 ---GSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGM 167 (187)
T ss_dssp ---SCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSSC
T ss_pred ---CchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCCC
Confidence 677899999999999999999999999999999999999999998875
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-19 Score=139.01 Aligned_cols=91 Identities=18% Similarity=0.198 Sum_probs=82.8
Q ss_pred HHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHH
Q 024023 115 LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRI 194 (274)
Q Consensus 115 L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~ 194 (274)
|+..|.+++++||++...+...++.+|+..+|+.++++++.+.. ||+++.+..++++
T Consensus 30 L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-----------------------Kp~~~~~~~~~~~ 86 (137)
T 2pr7_A 30 AKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVE-----------------------KPEEAAFQAAADA 86 (137)
T ss_dssp HHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCC-----------------------TTSHHHHHHHHHH
T ss_pred HHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCC-----------------------CCCHHHHHHHHHH
Confidence 33446899999999999888999999999999999999887764 9999999999999
Q ss_pred hCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCC
Q 024023 195 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 228 (274)
Q Consensus 195 ~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~ 228 (274)
+|++|+++++|||+.+|+.+|+++|+.++++.++
T Consensus 87 ~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~ 120 (137)
T 2pr7_A 87 IDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQF 120 (137)
T ss_dssp TTCCGGGEEEEESCHHHHHHHHHHTCEEEECSCH
T ss_pred cCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCCh
Confidence 9999999999999999999999999999988764
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=5e-20 Score=146.06 Aligned_cols=98 Identities=13% Similarity=0.072 Sum_probs=83.6
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHH
Q 024023 111 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190 (274)
Q Consensus 111 ~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 190 (274)
+.+.|+..|.+++++||.+...+...++.+|+..+|+. .||+++.+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~--------------------------------~kpk~~~~~~ 86 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG--------------------------------VVDKLSAAEE 86 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS--------------------------------CSCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc--------------------------------cCChHHHHHH
Confidence 45667777899999999999999999999999766654 2999999999
Q ss_pred HHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccC
Q 024023 191 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNS 240 (274)
Q Consensus 191 ~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~ 240 (274)
+++++|++++++++|||+.+|+.+++++|+++++.+.... ...+++++.+
T Consensus 87 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~ 137 (164)
T 3e8m_A 87 LCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEK 137 (164)
T ss_dssp HHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCC
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEecc
Confidence 9999999999999999999999999999998775433222 5668888887
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-20 Score=160.86 Aligned_cols=120 Identities=13% Similarity=0.155 Sum_probs=89.8
Q ss_pred CCCChhHHHHHHhC--CCcEEEEeCCChHHHHH---HHHHcCCCCccceeEeccc-CCCCCCCCCCCCcccccccCcccc
Q 024023 105 LKPDPVLRNLLLSM--PQRKIIFTNADQKHAME---VLGRLGLEDCFEGIICFET-INPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 105 ~~~~~~~~~~L~~l--~~~~~i~s~~~~~~~~~---~l~~~gl~~~fd~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
..+++++.++++.+ +.++ ++|+.+...... .++..++..+|+.+++.+. ...
T Consensus 136 ~~~~~~~~~~l~~l~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------------------- 193 (271)
T 1vjr_A 136 TLTYERLKKACILLRKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIA--------------------- 193 (271)
T ss_dssp TCCHHHHHHHHHHHTTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEEC---------------------
T ss_pred CcCHHHHHHHHHHHHCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccC---------------------
Confidence 34567887777665 3555 777765432111 1122234455666666655 444
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCCC--------CCccccccCHhHHHHHH
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV--------PPADHALNSIHNIKEAI 248 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~~--------~~a~~~~~~l~~l~~~l 248 (274)
+||++.++..+++++|++|+++++|||+. ||+.||+.+|+.++++.++... ..++++++++.+|.++|
T Consensus 194 --~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 194 --GKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp --STTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 49999999999999999999999999995 9999999999999999987642 37999999999998765
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-19 Score=143.12 Aligned_cols=109 Identities=19% Similarity=0.209 Sum_probs=86.6
Q ss_pred HHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHH
Q 024023 112 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 191 (274)
Q Consensus 112 ~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 191 (274)
.+.|+..|.+++|+||.+...+...++.+|+..+|+. +||+++.+..+
T Consensus 45 l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~--------------------------------~kp~~~~~~~~ 92 (162)
T 2p9j_A 45 IKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG--------------------------------SYKKLEIYEKI 92 (162)
T ss_dssp HHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC--------------------------------C--CHHHHHHH
T ss_pred HHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC--------------------------------CCCCHHHHHHH
Confidence 3444455789999999999999999999998876643 29999999999
Q ss_pred HHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH---HHHHHHHHHh
Q 024023 192 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN---IKEAIPEIWE 253 (274)
Q Consensus 192 l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~---l~~~l~~~~~ 253 (274)
++++|++|+++++|||+.+|+.+|+++|+.+++. ++.. ...+++++.+..+ +.++++.+..
T Consensus 93 ~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~~~~~~~~~~ 158 (162)
T 2p9j_A 93 KEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGALREVAELIHF 158 (162)
T ss_dssp HHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHHHHHHHHHHH
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999997644 3332 3468999999776 4456665543
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-18 Score=153.90 Aligned_cols=146 Identities=13% Similarity=0.096 Sum_probs=105.8
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
.++++||+.++++.| +++++++|++....+..+++.+|+..+|+..+...+.. .++.+......
T Consensus 176 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~-------------~tg~~~~~~~~ 242 (335)
T 3n28_A 176 TLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGK-------------LTGQVLGEVVS 242 (335)
T ss_dssp TCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE-------------EEEEEESCCCC
T ss_pred hCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCe-------------eeeeecccccC
Confidence 357889999988877 58999999999999999999999988887654332111 11122222334
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCcccc--ccCHhHHHHHHHHHHhhccc
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHA--LNSIHNIKEAIPEIWEGEGE 257 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~--~~~l~~l~~~l~~~~~~~~~ 257 (274)
+||+++.+..+++++|++++++++|||+.||+.|++.+|+++++ +.... +..++++ ..++.++..+|..... ...
T Consensus 243 ~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~-~~~ 320 (335)
T 3n28_A 243 AQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALV-AQQ 320 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHH-HTT
T ss_pred hhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHH-Hhh
Confidence 59999999999999999999999999999999999999999887 32221 3444444 4567777777766553 234
Q ss_pred chhhhcc
Q 024023 258 QLEQVIQ 264 (274)
Q Consensus 258 ~~~~~~~ 264 (274)
++++...
T Consensus 321 r~~~~~~ 327 (335)
T 3n28_A 321 KLSWKSK 327 (335)
T ss_dssp CCCCC--
T ss_pred hhccccc
Confidence 5555443
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-19 Score=149.99 Aligned_cols=108 Identities=15% Similarity=0.184 Sum_probs=88.7
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHH
Q 024023 111 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190 (274)
Q Consensus 111 ~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 190 (274)
+.+.|+..|++++|+|+.+...+...++.+|+..+|+. .|||++.+..
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~--------------------------------~k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQG--------------------------------QSDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECS--------------------------------CSSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhcc--------------------------------cCChHHHHHH
Confidence 66777778899999999999999999999999776653 1778999999
Q ss_pred HHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC-CCCCccccccCH------hHHHHHHHH
Q 024023 191 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHALNSI------HNIKEAIPE 250 (274)
Q Consensus 191 ~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~a~~~~~~l------~~l~~~l~~ 250 (274)
+++++|++++++++|||+.||+++++++|+.++..+... ....+++++.+. .++.+.+..
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll~ 198 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRGAVREVCDLILL 198 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHHHHHH
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999877544322 256789998875 455554433
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-19 Score=145.44 Aligned_cols=105 Identities=10% Similarity=0.094 Sum_probs=87.4
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHH
Q 024023 111 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190 (274)
Q Consensus 111 ~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 190 (274)
+.+.|+..|++++|+|+.+...+...++.+|+. ++.. .|||++.+..
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-----~~~~----------------------------~~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-----VLHG----------------------------IDRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----EEES----------------------------CSCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----eEeC----------------------------CCChHHHHHH
Confidence 567777778999999999999999999999986 3332 2899999999
Q ss_pred HHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccC------HhHHHHHHH
Q 024023 191 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS------IHNIKEAIP 249 (274)
Q Consensus 191 ~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~------l~~l~~~l~ 249 (274)
+++++|++++++++|||+.||+.+++.+|+.+++.+ +.. ...+++++.+ +.++.++|.
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~-~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~ 159 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVAS-AHDVVRGAARAVTTVPGGDGAIREIASWIL 159 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT-CCHHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCC-hhHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 999999999999999999999999999998866433 332 4568899988 777776653
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.75 E-value=2.1e-19 Score=146.20 Aligned_cols=106 Identities=13% Similarity=0.201 Sum_probs=88.0
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHH
Q 024023 111 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190 (274)
Q Consensus 111 ~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 190 (274)
+.+.|+..|++++|+|+.+...+...++.+|+..+|+.+ ++||+.+..
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~--------------------------------~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR--------------------------------EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC--------------------------------SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc--------------------------------CChHHHHHH
Confidence 567777788999999999999999999999998777653 455699999
Q ss_pred HHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccC------HhHHHHHHH
Q 024023 191 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS------IHNIKEAIP 249 (274)
Q Consensus 191 ~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~------l~~l~~~l~ 249 (274)
+++++|++++++++|||+.||+.+++.+|+.+++.+ +.. ...+++++.+ +.++.+.+.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~-~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~ 167 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVAN-AASFVREHAHGITRAQGGEGAAREFCELIL 167 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT-SCHHHHHTSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCC-ccHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 999999999999999999999999999999866433 332 4568888888 566666554
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.75 E-value=8.6e-18 Score=150.54 Aligned_cols=134 Identities=20% Similarity=0.196 Sum_probs=110.4
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccc--eeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFE--GIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
.+.++||+.++|+.| |++++|+||++...+...++.+|+..+|+ .+++++++... +...+...
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~------------~~~~~~~k 280 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA------------ENMYPQAR 280 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH------------HHHSTTSC
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc------------cccccccc
Confidence 467899999999988 58999999999999999999999999999 88988865310 00000000
Q ss_pred cCCCCCHHHHHHHHHHhC--------------CCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC---------CCCcc
Q 024023 179 ILCKPSLEAIETAIRIAN--------------VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---------VPPAD 235 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g--------------~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~---------~~~a~ 235 (274)
-.+||+|+.+..+++++| ++|++|++|||+.+|+.+|+++|+.++++.++.. ..+++
T Consensus 281 p~~KP~P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad 360 (384)
T 1qyi_A 281 PLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHAD 360 (384)
T ss_dssp CCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCS
T ss_pred CCCCCCHHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCC
Confidence 014999999999999999 8999999999999999999999999999988752 24799
Q ss_pred ccccCHhHHHHHHH
Q 024023 236 HALNSIHNIKEAIP 249 (274)
Q Consensus 236 ~~~~~l~~l~~~l~ 249 (274)
++++++.+|.++|.
T Consensus 361 ~vi~sl~eL~~~l~ 374 (384)
T 1qyi_A 361 YVINHLGELRGVLD 374 (384)
T ss_dssp EEESSGGGHHHHHS
T ss_pred EEECCHHHHHHHHH
Confidence 99999999988763
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.9e-19 Score=149.28 Aligned_cols=75 Identities=16% Similarity=0.288 Sum_probs=65.7
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHHHHHH
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI 248 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l~~~l 248 (274)
...+||++.++..+++++|++++++++|||+. ||+.||+.+|++++++.++.. ...++++++++.++.+.|
T Consensus 186 ~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l 265 (271)
T 2x4d_A 186 EVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLL 265 (271)
T ss_dssp EEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHH
T ss_pred eeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHH
Confidence 34579999999999999999999999999998 999999999999999988732 145899999999998877
Q ss_pred HHHH
Q 024023 249 PEIW 252 (274)
Q Consensus 249 ~~~~ 252 (274)
....
T Consensus 266 ~~~~ 269 (271)
T 2x4d_A 266 LQHA 269 (271)
T ss_dssp HHHC
T ss_pred Hhhc
Confidence 6543
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-18 Score=138.94 Aligned_cols=101 Identities=20% Similarity=0.357 Sum_probs=84.6
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCC---------------ChHHHHHHHHHcCCCCccceeEec-----ccCCCCCC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNA---------------DQKHAMEVLGRLGLEDCFEGIICF-----ETINPRLQ 160 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~---------------~~~~~~~~l~~~gl~~~fd~i~~~-----~~~~~~~~ 160 (274)
...++||+.++|+.| +++++|+||+ ....+...++.+|+. |+.++.+ ++.+..
T Consensus 40 ~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~-- 115 (176)
T 2fpr_A 40 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCR-- 115 (176)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSS--
T ss_pred HCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCccccccc--
Confidence 357889999988887 5889999998 567888899999987 8888754 566554
Q ss_pred CCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 161 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||+|+++..+++++|++|+++++|||+.+|+.+|+++|+.++++.++.
T Consensus 116 ---------------------KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~ 163 (176)
T 2fpr_A 116 ---------------------KPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 163 (176)
T ss_dssp ---------------------TTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred ---------------------CCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence 999999999999999999999999999999999999999999998764
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.8e-18 Score=142.01 Aligned_cols=96 Identities=20% Similarity=0.215 Sum_probs=75.7
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecc---cCCCCCCCCCCCCcccccccCccccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFE---TINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
.+.|++.++|+.| |++++|+||++.......++. +.++|+.++.+. ..+.
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~~~~~---------------------- 143 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPVIFAG---------------------- 143 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCCEECC----------------------
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchhhhcC----------------------
Confidence 3577888888877 589999999987655555555 455677653222 1222
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~ 230 (274)
.||+|+.+..+++++|+ |++|||+.+|+.+|+++|+.++++.++..
T Consensus 144 -~KP~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~~g~~ 189 (211)
T 2b82_A 144 -DKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILRASN 189 (211)
T ss_dssp -CCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred -CCCCHHHHHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEecCCC
Confidence 39999999999999998 99999999999999999999999988764
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.72 E-value=9.2e-20 Score=157.16 Aligned_cols=114 Identities=18% Similarity=0.147 Sum_probs=91.2
Q ss_pred CChhHHHHHHhCCCcEEEEeCCChHHH--H--HHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 107 PDPVLRNLLLSMPQRKIIFTNADQKHA--M--EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 107 ~~~~~~~~L~~l~~~~~i~s~~~~~~~--~--~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
.++++.+.|+..+.+ +|+||.+.... . ..++..++..+|+.++++++++.. |
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~-----------------------K 204 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFG-----------------------K 204 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEES-----------------------T
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEec-----------------------C
Confidence 455666666666788 99999876654 2 123455677789999888877654 9
Q ss_pred CCHHHHHHHHHHh----CCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCCC------------CCccccccCHhHH
Q 024023 183 PSLEAIETAIRIA----NVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV------------PPADHALNSIHNI 244 (274)
Q Consensus 183 p~~~~~~~~l~~~----g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~~------------~~a~~~~~~l~~l 244 (274)
|+|+++..+++++ |++|+++++|||++ +|+.+|+++|+.++++.++... ..|+++++++.+|
T Consensus 205 P~p~~~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 205 PDSQMFMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp TSSHHHHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred CCHHHHHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 9999999999999 99999999999996 9999999999999999887641 4578888877664
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.72 E-value=4.6e-18 Score=138.99 Aligned_cols=107 Identities=13% Similarity=0.199 Sum_probs=86.8
Q ss_pred HHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHH
Q 024023 112 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 191 (274)
Q Consensus 112 ~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 191 (274)
.+.|+..|++++|+||.+...+...++.+|+..+|+. .||++..+..+
T Consensus 61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~--------------------------------~k~k~~~~~~~ 108 (195)
T 3n07_A 61 VKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQG--------------------------------QDDKVQAYYDI 108 (195)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECS--------------------------------CSSHHHHHHHH
T ss_pred HHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeC--------------------------------CCCcHHHHHHH
Confidence 4667778899999999999999999999998765532 28999999999
Q ss_pred HHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccC------HhHHHHHHHHH
Q 024023 192 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS------IHNIKEAIPEI 251 (274)
Q Consensus 192 l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~------l~~l~~~l~~~ 251 (274)
++++|++++++++|||+.||+++++.+|+.+++. ++.. ...+++++.+ +.++.+.+...
T Consensus 109 ~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~ 175 (195)
T 3n07_A 109 CQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAVREVCDLILQA 175 (195)
T ss_dssp HHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHH
T ss_pred HHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999886643 3332 4568888876 34555555443
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.9e-18 Score=147.33 Aligned_cols=71 Identities=27% Similarity=0.418 Sum_probs=62.7
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCC-hhcHHHHHHcCCeEEEECCCCC-----CC---CccccccCHhHHHHHHHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP-----VP---PADHALNSIHNIKEAIPE 250 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs-~~Di~~a~~~G~~~v~v~~~~~-----~~---~a~~~~~~l~~l~~~l~~ 250 (274)
.+||++.+++.+++++|++++++++|||+ .||+.|++.+|+.++++.+|.. .. .|+++++++.+|.+.++-
T Consensus 181 ~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~~~ 260 (266)
T 3pdw_A 181 IGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYIEG 260 (266)
T ss_dssp CSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHHHHHH
T ss_pred cCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHhhc
Confidence 46999999999999999999999999999 7999999999999999998764 22 599999999999987653
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.3e-19 Score=150.40 Aligned_cols=120 Identities=18% Similarity=0.127 Sum_probs=94.1
Q ss_pred CCCCChhHHHHHHhC--CCcEEEEeCCChHHH--HHHHHH-cCCCCccceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 104 KLKPDPVLRNLLLSM--PQRKIIFTNADQKHA--MEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l--~~~~~i~s~~~~~~~--~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
...++|++.++++.| +.++ |+||.+.... ...+.. .++..+|+.++++++...
T Consensus 128 ~~~~~~~~~~~l~~L~~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~--------------------- 185 (263)
T 1zjj_A 128 PDLTYEKLKYATLAIRNGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIII--------------------- 185 (263)
T ss_dssp TTCBHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEEC---------------------
T ss_pred CCCCHHHHHHHHHHHHCCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEe---------------------
Confidence 356789999988776 4666 8899876543 222222 345566888888776655
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCCC--------CCccccccCHhHHHHHHH
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV--------PPADHALNSIHNIKEAIP 249 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~~--------~~a~~~~~~l~~l~~~l~ 249 (274)
+||+|.++..++++ ++|+++++|||++ +|+.+|+++|+.++++.++... ..++++++++.+|.+.|.
T Consensus 186 --~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~ 261 (263)
T 1zjj_A 186 --GKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLK 261 (263)
T ss_dssp --STTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC
T ss_pred --cCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHh
Confidence 49999999999999 9999999999996 9999999999999999887641 279999999999977553
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.4e-19 Score=157.78 Aligned_cols=123 Identities=20% Similarity=0.195 Sum_probs=95.6
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHH--H-HHHHHcC-CCCccceeEecccCCCCCCCCCCCCcccccccCccc
Q 024023 104 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHA--M-EVLGRLG-LEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 177 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~--~-~~l~~~g-l~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (274)
...++|++.++++.++ ..++++||.+.... . ..+...| +..+|+.+++.+....
T Consensus 154 ~~~~~~~~~~~l~~l~~~g~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~-------------------- 213 (306)
T 2oyc_A 154 EHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVV-------------------- 213 (306)
T ss_dssp TTCCHHHHHHHHHHHTSTTSEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEEC--------------------
T ss_pred CCCCHHHHHHHHHHHHcCCCEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceee--------------------
Confidence 3456789998888774 22888998876533 1 2223334 4556777777776655
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCCC--------------CCccccccCHh
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV--------------PPADHALNSIH 242 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~~--------------~~a~~~~~~l~ 242 (274)
+||+|.++..+++++|++|+++++|||+. +|+.+|+++|+.++++.+|... ..|+++++++.
T Consensus 214 ---~KP~~~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~ 290 (306)
T 2oyc_A 214 ---GKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIA 290 (306)
T ss_dssp ---STTSTHHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGG
T ss_pred ---CCCCHHHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHH
Confidence 49999999999999999999999999997 9999999999999999887641 36899999999
Q ss_pred HHHHHHH
Q 024023 243 NIKEAIP 249 (274)
Q Consensus 243 ~l~~~l~ 249 (274)
+|.+.++
T Consensus 291 el~~~l~ 297 (306)
T 2oyc_A 291 DLTEGLE 297 (306)
T ss_dssp GGGGGC-
T ss_pred HHHHHHH
Confidence 9876544
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.71 E-value=5.3e-18 Score=146.63 Aligned_cols=110 Identities=15% Similarity=0.199 Sum_probs=90.0
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
...++||+.++|+.| +.+++|+|+++...+...++.+|+..+|+.++.
T Consensus 161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~----------------------------- 211 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLP----------------------------- 211 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCT-----------------------------
T ss_pred ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecCh-----------------------------
Confidence 357899999998887 589999999999999999999999888876541
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP 249 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l~ 249 (274)
.+| ..++++++.. ++|++|||+.+|+.+|+++|+.++ +..+.. ...+++++ +++.++.++|.
T Consensus 212 -~~K----~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~-~~~~~~~~~~~ad~v~~~~~~~~l~~~l~ 277 (287)
T 3a1c_A 212 -HQK----SEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIA-VGSGSDVAVESGDIVLIRDDLRDVVAAIQ 277 (287)
T ss_dssp -TCH----HHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEE-ECCCSCCSSCCSSEEESSSCTHHHHHHHH
T ss_pred -HHH----HHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEE-eCCCCHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 222 6778889999 999999999999999999999844 443322 56789999 99999887653
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=9.9e-18 Score=135.11 Aligned_cols=99 Identities=16% Similarity=0.228 Sum_probs=82.4
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHH
Q 024023 111 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190 (274)
Q Consensus 111 ~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 190 (274)
+.+.|+..|.+++++|+.+...+...++.+|+..+|+. .||++..+..
T Consensus 43 ~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~--------------------------------~k~k~~~~~~ 90 (180)
T 1k1e_A 43 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG--------------------------------KLEKETACFD 90 (180)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES--------------------------------CSCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC--------------------------------CCCcHHHHHH
Confidence 44555566899999999999999999999999766532 2999999999
Q ss_pred HHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCH
Q 024023 191 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSI 241 (274)
Q Consensus 191 ~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l 241 (274)
+++++|++|+++++|||+.||+.+++.+|+.+++.+.... ...+++++.+.
T Consensus 91 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~ 142 (180)
T 1k1e_A 91 LMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTH 142 (180)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSC
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCC
Confidence 9999999999999999999999999999999775432221 46788988875
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=8.7e-19 Score=149.78 Aligned_cols=110 Identities=18% Similarity=0.235 Sum_probs=85.6
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
.++|++.++|+.| +.+++++|+.+...+...++.+|+..+|+.+++.++..
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~k~~-------------------------- 197 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHEKAE-------------------------- 197 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGGHHH--------------------------
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHHHHH--------------------------
Confidence 5789999988877 58999999999999999999999999999888765332
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC-CCCCccccc--cCHhHHHHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHAL--NSIHNIKEAIPE 250 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~a~~~~--~~l~~l~~~l~~ 250 (274)
.++...+.+ ++++|||+.||++|++.+|+.+++.+... ....+++++ +++.++..+|..
T Consensus 198 ----~~k~~~~~~-----~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~~ 259 (280)
T 3skx_A 198 ----KVKEVQQKY-----VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVEL 259 (280)
T ss_dssp ----HHHHHHTTS-----CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHHHHHH
T ss_pred ----HHHHHHhcC-----CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHHHHHH
Confidence 333333333 78999999999999999998665543222 245567777 999999987763
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=5.1e-18 Score=137.80 Aligned_cols=99 Identities=16% Similarity=0.213 Sum_probs=83.7
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHH
Q 024023 111 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190 (274)
Q Consensus 111 ~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 190 (274)
+.+.|+..|.+++|+||.+...+...++.+|+..+|+. +||+++.+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~--------------------------------~kpk~~~~~~ 108 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQG--------------------------------QSNKLIAFSD 108 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECS--------------------------------CSCSHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecC--------------------------------CCCCHHHHHH
Confidence 55666777899999999999999999999998765532 3999999999
Q ss_pred HHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCH
Q 024023 191 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSI 241 (274)
Q Consensus 191 ~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l 241 (274)
+++++|++++++++|||+.+|+.+++.+|+.+++.+.... ...+++++.+.
T Consensus 109 ~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 109 LLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIA 160 (188)
T ss_dssp HHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSC
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCC
Confidence 9999999999999999999999999999999875432222 45689999886
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.5e-19 Score=145.87 Aligned_cols=170 Identities=17% Similarity=0.136 Sum_probs=115.7
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCc---chHHHH-HHHHHHHhcCcHHHHHHhcCCCChHHHHHHH
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDE---SEVPRM-CLELYREHGTTMAGLKAVGYEFDNDEFHAFV 96 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (274)
.++|+||+||||+|+...+..++.+ .++ |.+. .....+ ....+. .. .+...+.+.+.+
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~-----~~~--g~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~~ 63 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRR-----RFP--EEPHVPLEQRRGFLAREQYR----------AL-RPDLADKVASVY 63 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHH-----HST--TSCCCCGGGCCSSCHHHHHH----------HH-CTTHHHHHHHHH
T ss_pred CcEEEEECCCcCccchhHHHHHHHH-----Hhc--CCCCCCHHHHHHhhHHHHHH----------HH-hHHHHHHHHHHH
Confidence 4799999999999988877776664 222 4431 111000 001111 11 111133444555
Q ss_pred hccCCCCCCCCChhHHHHHHhC----CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccc
Q 024023 97 HGKLPYEKLKPDPVLRNLLLSM----PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 172 (274)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~L~~l----~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~ 172 (274)
..........++||+.++|+.| |.+++|+||++...+...++.+|+ |+.++++
T Consensus 64 ~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~-------------------- 120 (193)
T 2i7d_A 64 EAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGP-------------------- 120 (193)
T ss_dssp TSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCH--------------------
T ss_pred HhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCH--------------------
Confidence 4432234678999999998877 467899999999888888998887 7766542
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhc----HHHHH-HcCCeEEEECCCCCCC---Cccc-cccCH-h
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN----IASAK-AAGLHTVIVGSSVPVP---PADH-ALNSI-H 242 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~D----i~~a~-~~G~~~v~v~~~~~~~---~a~~-~~~~l-~ 242 (274)
.+++++|++|++|++|||+.+| +.+|+ ++|+.++++.++.+.. .+++ ++.++ +
T Consensus 121 -----------------~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~ 183 (193)
T 2i7d_A 121 -----------------QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLSWSD 183 (193)
T ss_dssp -----------------HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCCCTTSCEECSTTS
T ss_pred -----------------HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccceEEEEeccCcccccccchHHHhhHHH
Confidence 2678899999999999999999 99999 9999999998765422 2344 58888 5
Q ss_pred HHHHHH
Q 024023 243 NIKEAI 248 (274)
Q Consensus 243 ~l~~~l 248 (274)
++.++|
T Consensus 184 ~~~~~~ 189 (193)
T 2i7d_A 184 NWREIL 189 (193)
T ss_dssp CHHHHH
T ss_pred HHHHHh
Confidence 555544
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-17 Score=144.51 Aligned_cols=125 Identities=10% Similarity=0.056 Sum_probs=93.6
Q ss_pred CCChhHHHHHHhC----CCcEEEEeCC---------------------ChHHHHHHHHHcCCCCcccee----------E
Q 024023 106 KPDPVLRNLLLSM----PQRKIIFTNA---------------------DQKHAMEVLGRLGLEDCFEGI----------I 150 (274)
Q Consensus 106 ~~~~~~~~~L~~l----~~~~~i~s~~---------------------~~~~~~~~l~~~gl~~~fd~i----------~ 150 (274)
.+.+++.++++.+ +.++.+.|+. ....+...++..|+..+|..+ +
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 201 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY 201 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence 4567888887766 6677777766 455667777888887666543 3
Q ss_pred ecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC
Q 024023 151 CFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~ 230 (274)
+.+.... +++|+.++..+++++|++++++++|||+.||+.+++.+|+.++ +.++..
T Consensus 202 ~~~~~~~-----------------------~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~-~~~~~~ 257 (289)
T 3gyg_A 202 DVDFIPI-----------------------GTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYL-LKNATQ 257 (289)
T ss_dssp EEEEEES-----------------------CCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEE-CTTCCH
T ss_pred EEEEEeC-----------------------CCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEE-ECCccH
Confidence 3333333 4999999999999999999999999999999999999997655 444332
Q ss_pred --CCCccccccCHhH--HHHHHHHHHhh
Q 024023 231 --VPPADHALNSIHN--IKEAIPEIWEG 254 (274)
Q Consensus 231 --~~~a~~~~~~l~~--l~~~l~~~~~~ 254 (274)
+..+++++.+..+ +.+.|++++..
T Consensus 258 ~~~~~a~~v~~~~~~~gv~~~~~~~~~~ 285 (289)
T 3gyg_A 258 EAKNLHNLITDSEYSKGITNTLKKLIGF 285 (289)
T ss_dssp HHHHHCCCBCSSCHHHHHHHHHHHHTCC
T ss_pred HHHHhCCEEcCCCCcCHHHHHHHHHHHH
Confidence 4558888888776 77777776654
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.70 E-value=9.4e-19 Score=143.00 Aligned_cols=174 Identities=14% Similarity=0.093 Sum_probs=117.0
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcC-CCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhc
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLH-IDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHG 98 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (274)
++|+|+||+||||+|+...+..++.+. ++.++ .+......+ .... .+..+. +...+.+...+..
T Consensus 3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~-------~~~~~~-~~~~~~~~~~~~~ 67 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEGGFLRKFRAR-----FPDQPFIALEDRRGF--WVSE-------QYGRLR-PGLSEKAISIWES 67 (197)
T ss_dssp CCEEEEECSBTTTBCHHHHHHHHHHHH-----CTTSCCCCGGGCCSS--CHHH-------HHHHHS-TTHHHHHHHHHTS
T ss_pred CceEEEEeCCCCCccCcHHHHHHHHHH-----HhcCCCCCHHHhcCC--cHHH-------HHHhcC-HHHHHHHHHHHHh
Confidence 568999999999999888777777653 23322 111110000 0000 011011 1112233344433
Q ss_pred cCCCCCCCCChhHHHHHHhC----CCcEEEEeCCChHHHHHHHHHcCCCC-ccceeEecccCCCCCCCCCCCCccccccc
Q 024023 99 KLPYEKLKPDPVLRNLLLSM----PQRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSF 173 (274)
Q Consensus 99 ~~~~~~~~~~~~~~~~L~~l----~~~~~i~s~~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~ 173 (274)
........++||+.++|+.| |++++|+||++...+...++++|+.. +|+
T Consensus 68 ~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~-------------------------- 121 (197)
T 1q92_A 68 KNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG-------------------------- 121 (197)
T ss_dssp TTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC--------------------------
T ss_pred hhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch--------------------------
Confidence 32234678999999998887 46899999999888888888888877 775
Q ss_pred CcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhc----HHHHH-HcCCeEEEECCCCCCC---Cccc-cccCH-hH
Q 024023 174 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN----IASAK-AAGLHTVIVGSSVPVP---PADH-ALNSI-HN 243 (274)
Q Consensus 174 ~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~D----i~~a~-~~G~~~v~v~~~~~~~---~a~~-~~~~l-~~ 243 (274)
..+++++|+.|+++++|||+.+| +.+|+ ++|+.++++.++.... .+++ +++++ ++
T Consensus 122 ---------------~~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~ 186 (197)
T 1q92_A 122 ---------------PDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADD 186 (197)
T ss_dssp ---------------GGGGGGEEECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSC
T ss_pred ---------------HHHHHHhccCCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHHHH
Confidence 13556789999999999999999 99999 9999999998766532 2234 68898 58
Q ss_pred HHHHHH
Q 024023 244 IKEAIP 249 (274)
Q Consensus 244 l~~~l~ 249 (274)
+.++|.
T Consensus 187 l~~~l~ 192 (197)
T 1q92_A 187 WKAILD 192 (197)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 777665
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.9e-17 Score=134.80 Aligned_cols=106 Identities=17% Similarity=0.275 Sum_probs=87.4
Q ss_pred HHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHH
Q 024023 112 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 191 (274)
Q Consensus 112 ~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 191 (274)
.+.|+..|++++|+||.+...+...++.+|+..+|+. .||+++++..+
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~--------------------------------~kpk~~~~~~~ 102 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKG--------------------------------QVDKRSAYQHL 102 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECS--------------------------------CSSCHHHHHHH
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeC--------------------------------CCChHHHHHHH
Confidence 4566777899999999999999999999999766553 28999999999
Q ss_pred HHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccC------HhHHHHHHHH
Q 024023 192 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS------IHNIKEAIPE 250 (274)
Q Consensus 192 l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~------l~~l~~~l~~ 250 (274)
++++|++++++++|||+.||+.+++.+|+.++ +.++.. ...+++++.+ +.++.+.+..
T Consensus 103 ~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~-~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~ 168 (191)
T 3n1u_A 103 KKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVA-VSNAVPQVLEFADWRTERTGGRGAVRELCDLILN 168 (191)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHH
T ss_pred HHHhCCCHHHEEEECCCHHHHHHHHHCCCEEE-eCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999875 433332 4568888888 5566655543
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-16 Score=135.54 Aligned_cols=72 Identities=29% Similarity=0.407 Sum_probs=64.1
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCC-hhcHHHHHHcCCeEEEECCCCCC------------CCccccccCHhHH
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVPV------------PPADHALNSIHNI 244 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs-~~Di~~a~~~G~~~v~v~~~~~~------------~~a~~~~~~l~~l 244 (274)
...+||++.++..+++++|++++++++|||+ .+|+.+|+++|+.++++.++... ..|+++++++.+|
T Consensus 183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el 262 (268)
T 3qgm_A 183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM 262 (268)
T ss_dssp EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence 5578999999999999999999999999999 59999999999999999887642 1689999999999
Q ss_pred HHHHH
Q 024023 245 KEAIP 249 (274)
Q Consensus 245 ~~~l~ 249 (274)
.++|+
T Consensus 263 ~~~l~ 267 (268)
T 3qgm_A 263 VEALE 267 (268)
T ss_dssp HHTC-
T ss_pred HHHHh
Confidence 87653
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.68 E-value=4.6e-17 Score=138.78 Aligned_cols=67 Identities=16% Similarity=0.293 Sum_probs=60.1
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCC-hhcHHHHHHcCCeEEEECCCCC------C--CCccccccCHhHHH
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP------V--PPADHALNSIHNIK 245 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs-~~Di~~a~~~G~~~v~v~~~~~------~--~~a~~~~~~l~~l~ 245 (274)
..+||++.++..+++++|++++++++|||+ .||+.+|+++|+.++++.+|.. . ..|+++++++.+|.
T Consensus 179 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~ 254 (264)
T 3epr_A 179 FIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWT 254 (264)
T ss_dssp ECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCC
T ss_pred cCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHh
Confidence 346999999999999999999999999999 6999999999999999998764 1 27999999998874
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.67 E-value=5.8e-16 Score=124.41 Aligned_cols=167 Identities=12% Similarity=0.126 Sum_probs=106.5
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhcc
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGK 99 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (274)
++++|+||+||||+|+...+..++.+ .+|.+..... + .|...... ++ ...+.+.+.+...
T Consensus 3 m~~~viFD~DGtL~Ds~~~~~~~~~~--------~~g~~~~~~~-~-------~g~~~~~~--~~--~~~~~~~~~~~~~ 62 (180)
T 3bwv_A 3 TRQRIAIDMDEVLADTLGAVVKAVNE--------RADLNIKMES-L-------NGKKLKHM--IP--EHEGLVMDILKEP 62 (180)
T ss_dssp CCCEEEEETBTTTBCHHHHHHHHHHH--------HSCCCCCGGG-C-------TTCCC------------CHHHHHHHST
T ss_pred cccEEEEeCCCcccccHHHHHHHHHH--------HhCCCCCHHH-H-------cCccHHHH--CC--chHHHHHHHHhCc
Confidence 35899999999999987777665542 4454422110 0 01111110 01 1122344443322
Q ss_pred CCCCCCCCChhHHHHHHhCC--CcEEEEeCC---ChH--HHHHHHHH-cCCCCccceeEecccCCCCCCCCCCCCccccc
Q 024023 100 LPYEKLKPDPVLRNLLLSMP--QRKIIFTNA---DQK--HAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENN 171 (274)
Q Consensus 100 ~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~---~~~--~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
.......++||+.++|+.|+ .+++|+||+ +.. .....+.. ++...+|+.++++++.
T Consensus 63 ~~~~~~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~---------------- 126 (180)
T 3bwv_A 63 GFFRNLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN---------------- 126 (180)
T ss_dssp TGGGSCCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG----------------
T ss_pred chhccCCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC----------------
Confidence 22346789999999999985 689999998 322 22444544 5666777888876520
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCHhHHHHHHHH
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHNIKEAIPE 250 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l~~l~~~l~~ 250 (274)
+ + ++|++||||.+++. .++| .+++++++.. ...++++++++.+|..+|..
T Consensus 127 ----------~------------l----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~~~~~~~i~~~~el~~~l~~ 177 (180)
T 3bwv_A 127 ----------I------------I----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVYEHRFERVSGWRDVKNYFNS 177 (180)
T ss_dssp ----------G------------B----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTTCCSSEEECSHHHHHHHHHH
T ss_pred ----------e------------e----cccEEecCCcchHH--HhCC-CeEEeCCCcccCCCCceecCCHHHHHHHHHH
Confidence 1 1 67999999999985 4689 9999987653 35688999999999987764
Q ss_pred H
Q 024023 251 I 251 (274)
Q Consensus 251 ~ 251 (274)
+
T Consensus 178 ~ 178 (180)
T 3bwv_A 178 I 178 (180)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.4e-16 Score=135.88 Aligned_cols=74 Identities=9% Similarity=0.057 Sum_probs=62.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCHhH--HHHHHHHHHhh
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEIWEG 254 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l~~--l~~~l~~~~~~ 254 (274)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+++++.+.... +..|++++.+..+ +..+|++++..
T Consensus 200 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~ 276 (290)
T 3dnp_A 200 GVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRM 276 (290)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHHh
Confidence 58899999999999999999999999999999999999987665433322 6678999998877 88888877654
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.65 E-value=5.9e-16 Score=129.47 Aligned_cols=104 Identities=18% Similarity=0.189 Sum_probs=77.6
Q ss_pred EEEe-CCChHHHHHHHHHcCCCCccceeEecc---cCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCC
Q 024023 123 IIFT-NADQKHAMEVLGRLGLEDCFEGIICFE---TINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD 198 (274)
Q Consensus 123 ~i~s-~~~~~~~~~~l~~~gl~~~fd~i~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~ 198 (274)
.+++ +.....+...++.++ ..|+.+ ++. ++.. .++||+.++..+++++|++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~ei~~----------------------~~~~K~~~~~~~~~~~~~~ 168 (231)
T 1wr8_A 114 VIMRETINVETVREIINELN--LNLVAV-DSGFAIHVKK----------------------PWINKGSGIEKASEFLGIK 168 (231)
T ss_dssp EECTTTSCHHHHHHHHHHTT--CSCEEE-ECSSCEEEEC----------------------TTCCHHHHHHHHHHHHTSC
T ss_pred EEECCCCCHHHHHHHHHhcC--CcEEEE-ecCcEEEEec----------------------CCCChHHHHHHHHHHcCCC
Confidence 4555 446677777777764 446655 332 1211 2599999999999999999
Q ss_pred CCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHHHHH
Q 024023 199 PKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIW 252 (274)
Q Consensus 199 ~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~~~~ 252 (274)
++++++|||+.||++|++.+|+. +.+.++.. +..+++++.+..+ +.++|+++.
T Consensus 169 ~~~~~~iGD~~nD~~~~~~ag~~-v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~~~ 225 (231)
T 1wr8_A 169 PKEVAHVGDGENDLDAFKVVGYK-VAVAQAPKILKENADYVTKKEYGEGGAEAIYHIL 225 (231)
T ss_dssp GGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred HHHEEEECCCHHHHHHHHHcCCe-EEecCCCHHHHhhCCEEecCCCcchHHHHHHHHH
Confidence 99999999999999999999998 44655543 4578999988776 667776665
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.64 E-value=9.4e-16 Score=131.38 Aligned_cols=75 Identities=17% Similarity=0.199 Sum_probs=58.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCHhH--HHHHHHHHHhhc
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEIWEGE 255 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l~~--l~~~l~~~~~~~ 255 (274)
+++|+.+++.+++++|++++++++|||+.||++|++.+|+++++-+.... +..|++++.+..+ +..+|++++...
T Consensus 195 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~~ 272 (279)
T 4dw8_A 195 GIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFNVE 272 (279)
T ss_dssp TCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC---
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHhcc
Confidence 58889999999999999999999999999999999999977664333222 5568898887655 667777666543
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-15 Score=121.48 Aligned_cols=115 Identities=11% Similarity=0.066 Sum_probs=84.3
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHH--HcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHH
Q 024023 111 LRNLLLSMPQRKIIFTNADQKHAMEVLG--RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAI 188 (274)
Q Consensus 111 ~~~~L~~l~~~~~i~s~~~~~~~~~~l~--~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~ 188 (274)
..+.|+..|++++|+|+. ..+...++ .+|+. ++.+ .++|++.+
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-----~~~g----------------------------~~~K~~~l 88 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-----TEVS----------------------------VSDKLATV 88 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-----EECS----------------------------CSCHHHHH
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-----EEEC----------------------------CCChHHHH
Confidence 456677788999999999 66777888 45553 2222 27889999
Q ss_pred HHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH---HHHHHHHHHhhcccchhh
Q 024023 189 ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN---IKEAIPEIWEGEGEQLEQ 261 (274)
Q Consensus 189 ~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~---l~~~l~~~~~~~~~~~~~ 261 (274)
..+++++|++|+++++|||+.||+++++.+|+.++ +.++.. +..+++++.+-.+ +.++++.+......++++
T Consensus 89 ~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a-~~na~~~~k~~Ad~v~~~~~~~G~~~~~~~~il~~~~~~~~~ 165 (168)
T 3ewi_A 89 DEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAV-PADACSGAQKAVGYICKCSGGRGAIREFAEHIFLLIEKVNNS 165 (168)
T ss_dssp HHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEE-CTTCCHHHHTTCSEECSSCTTTTHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEE-eCChhHHHHHhCCEEeCCCCCccHHHHHHHHHHHhhhhhhcc
Confidence 99999999999999999999999999999999865 444443 6778888876432 445555555554444443
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.8e-15 Score=137.48 Aligned_cols=94 Identities=23% Similarity=0.288 Sum_probs=82.1
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCC---------h---HHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccccc
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNAD---------Q---KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 171 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~---------~---~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
++||+.++|+.| |++++|+||.+ . ..+...++.+|+. |+.++++++...+
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~------------- 152 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNR------------- 152 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTTS-------------
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCCC-------------
Confidence 688999988887 58999999966 2 2367788899985 8999999888765
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhC----CCCCeEEEEcCCh-----------------hcHHHHHHcCCeEEEE
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDSA-----------------RNIASAKAAGLHTVIV 225 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g----~~~~~~i~VGDs~-----------------~Di~~a~~~G~~~v~v 225 (274)
||+|+++..+++++| +++++|++|||+. +|+.+|+++|+.++..
T Consensus 153 ----------KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~p 217 (416)
T 3zvl_A 153 ----------KPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATP 217 (416)
T ss_dssp ----------TTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECH
T ss_pred ----------CCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCc
Confidence 999999999999998 9999999999997 8999999999998743
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.59 E-value=2.2e-15 Score=128.50 Aligned_cols=70 Identities=20% Similarity=0.167 Sum_probs=56.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCHhH--HHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPE 250 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l~~--l~~~l~~ 250 (274)
+++|+.+++.+++++|++++++++|||+.||++|++.+|+++++-+.... +..|++++.+..+ +..+|++
T Consensus 198 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 198 DFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp TCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 58999999999999999999999999999999999999987665433322 5568888887664 4444443
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.9e-15 Score=129.38 Aligned_cols=74 Identities=11% Similarity=0.074 Sum_probs=49.6
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCHhH--HHHHHHHHHhh
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEIWEG 254 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l~~--l~~~l~~~~~~ 254 (274)
+..|+.+++.+++.+|++++++++|||+.||++|++.+|+++++-+.... +..|++++.+..+ +..+|+++...
T Consensus 195 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~ 271 (279)
T 3mpo_A 195 RASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRKYALN 271 (279)
T ss_dssp SCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC-----
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHHHHhcc
Confidence 46689999999999999999999999999999999999987665444333 5668888877554 55666555443
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.57 E-value=6.4e-16 Score=134.44 Aligned_cols=73 Identities=14% Similarity=0.115 Sum_probs=61.6
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHHHHHhh
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEG 254 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~~~~~~ 254 (274)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+.+++ .++.. +..|++++.+..+ +..+|+++...
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~~ 302 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM-ANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS 302 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC-TTSCHHHHHHCSEECCCGGGTHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc-CCcCHHHHHhccEEcCCCCcchHHHHHHHHHHh
Confidence 47889999999999999999999999999999999999977664 33333 5678999998887 88888877653
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=2.4e-16 Score=134.60 Aligned_cols=110 Identities=18% Similarity=0.245 Sum_probs=90.1
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~---~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
..++||+.++|+.|+ ++++++||.+...+..+++.+|+.++|+.++.
T Consensus 135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~p------------------------------ 184 (263)
T 2yj3_A 135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLSP------------------------------ 184 (263)
Confidence 468899999999884 78999999999999999999999888877651
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC-CCCCccccc--cCHhHHHHHH
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHAL--NSIHNIKEAI 248 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~-~~~~a~~~~--~~l~~l~~~l 248 (274)
+.+..++++++..+++|+||||+.||+.+++++|+.+++..... ....+++++ +++.+|.+++
T Consensus 185 ----~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 185 ----EDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLI 250 (263)
Confidence 12366888899999999999999999999999998766543211 255789999 8999988754
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.8e-14 Score=123.93 Aligned_cols=70 Identities=14% Similarity=0.241 Sum_probs=57.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI 251 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~~~ 251 (274)
+.+|+.+++.+++.+|++++++++|||+.||++|++.+|+.+++ .++.. +..|++++.+-++ +..+|+++
T Consensus 209 ~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~s~~edGv~~~l~~~ 282 (283)
T 3dao_A 209 GVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV-SNARQEVIAAAKHTCAPYWENGVLSVLKSF 282 (283)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE-TTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc-CCCCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence 57889999999999999999999999999999999999977665 44433 5678999888776 66666543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.55 E-value=7.5e-16 Score=130.99 Aligned_cols=73 Identities=19% Similarity=0.290 Sum_probs=62.1
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHHHH
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI 251 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~~~ 251 (274)
...++||+.++..+++++|++++++++|||+.||++|++.+|+.+++ .++.. +..|++++.+..+ +..+|+++
T Consensus 182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVKAAADYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred cCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe-cCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence 45679999999999999999999999999999999999999987654 33332 4568999999999 88887764
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.53 E-value=1e-14 Score=125.55 Aligned_cols=71 Identities=11% Similarity=0.137 Sum_probs=53.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccc--cccCHhH--HHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADH--ALNSIHN--IKEAIPEI 251 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~--~~~~l~~--l~~~l~~~ 251 (274)
+.+|+.+++.+++.+|++++++++|||+.||++|++.+|+++++-+.... +..|++ ++.+-++ +..+|+++
T Consensus 207 ~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~ 282 (285)
T 3pgv_A 207 GVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKL 282 (285)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHH
Confidence 47889999999999999999999999999999999999977664443333 444554 4444433 55555554
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.48 E-value=3.5e-14 Score=120.82 Aligned_cols=70 Identities=17% Similarity=0.206 Sum_probs=56.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCHhH--HHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPE 250 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l~~--l~~~l~~ 250 (274)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+++++-+.... +..|++++.+..+ +..+|++
T Consensus 192 ~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 192 GTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 57889999999999999999999999999999999999988664433322 5568898887655 5555544
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.48 E-value=4.8e-14 Score=119.43 Aligned_cols=72 Identities=18% Similarity=0.193 Sum_probs=57.7
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHHH
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPE 250 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~~ 250 (274)
...+..|..+++.+++.+|++++++++|||+.||++|++.+|+++++ .++.. +..|++++.+..+ +..+|++
T Consensus 178 ~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 178 LPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM-GNAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp EESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE-TTCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred EECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe-CCCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 33467889999999999999999999999999999999999998775 44433 5568898877654 5555544
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.2e-14 Score=124.29 Aligned_cols=72 Identities=14% Similarity=0.175 Sum_probs=60.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHHHHHh
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWE 253 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~~~~~ 253 (274)
+++|+.+++.+++.+|++++++++|||+.||++|++.+|+.++ +.++.. +..|++++.+..+ +..+|+++..
T Consensus 189 ~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va-~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~ 264 (271)
T 1rlm_A 189 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA-MGNAAENIKQIARYATDDNNHEGALNVIQAVLD 264 (271)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-CTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEE-eCCccHHHHHhCCeeCcCCCCChHHHHHHHHHh
Confidence 5899999999999999999999999999999999999999755 544443 4568899888765 7777777654
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.2e-13 Score=117.46 Aligned_cols=96 Identities=11% Similarity=0.090 Sum_probs=71.2
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCC---hHHHHHHHHHcCCC--CccceeEecccCCCCCCCCCCCCcccccccCc
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNAD---QKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADNTDGIENNSFSS 175 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~---~~~~~~~l~~~gl~--~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (274)
...++||+.++|+.| |++++|+||.+ ...+...|+.+|+. .+|+.+++.++. .
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--~----------------- 159 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--K----------------- 159 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--C-----------------
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--C-----------------
Confidence 356889999988877 68999999988 55677788889998 677777776532 1
Q ss_pred ccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHH-------H---------cCCeEEEECCCC
Q 024023 176 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAK-------A---------AGLHTVIVGSSV 229 (274)
Q Consensus 176 ~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~-------~---------~G~~~v~v~~~~ 229 (274)
||.+ ...++ ..+. ..+++|||+.+|+.+|. + +|+.++.++++.
T Consensus 160 ------K~~~--~~~~~-~~~~--~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~ 218 (258)
T 2i33_A 160 ------GKEK--RRELV-SQTH--DIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPM 218 (258)
T ss_dssp ------SSHH--HHHHH-HHHE--EEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCS
T ss_pred ------CcHH--HHHHH-HhCC--CceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCC
Confidence 5443 33333 3343 34899999999999983 4 899999998775
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.5e-12 Score=108.52 Aligned_cols=72 Identities=7% Similarity=0.030 Sum_probs=56.0
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHHHH
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI 251 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~~~ 251 (274)
..+.+|+.+++.+++++|++++++++|||+.||++|++.+|+.+ .+.++.. +..+++++.+..+ +.++|+++
T Consensus 149 ~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~v-a~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~~~ 224 (227)
T 1l6r_A 149 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKA-CPANATDNIKAVSDFVSDYSYGEEIGQIFKHF 224 (227)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEE-ECTTSCHHHHHHCSEECSCCTTHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceE-EecCchHHHHHhCCEEecCCCCcHHHHHHHHH
Confidence 34678899999999999999999999999999999999999874 4555443 3457888877543 55555443
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=4.8e-13 Score=108.98 Aligned_cols=119 Identities=13% Similarity=0.042 Sum_probs=93.3
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
+.+.||+.++|+.++ ++++|+|++....+..+++.++...+|+.+++.++.... |
T Consensus 67 v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~-----------------------k 123 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFH-----------------------R 123 (195)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEE-----------------------T
T ss_pred EEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceec-----------------------C
Confidence 467899999999985 899999999999999999999999999999998876542 3
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHhhcc
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEG 256 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~~~~ 256 (274)
+.+...++++|.++++|++|||+.+++.++.++|+.+.... .. .. -..+.+|.++|+.+.....
T Consensus 124 ---~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~~--~~--~~---D~eL~~L~~~L~~l~~~~~ 187 (195)
T 2hhl_A 124 ---GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWF--DD--MT---DTELLDLIPFFEGLSREDD 187 (195)
T ss_dssp ---TEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCCS--SC--TT---CCHHHHHHHHHHHHHC---
T ss_pred ---CceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeeec--CC--CC---hHHHHHHHHHHHHHHhCcC
Confidence 34567788899999999999999999999999998864332 11 11 2346667777777665433
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.31 E-value=4.6e-12 Score=111.51 Aligned_cols=59 Identities=19% Similarity=0.152 Sum_probs=46.7
Q ss_pred CCCCCe----EEEEcCChhcHHHHHHc----CCeEEEECCCCC--CCCccccccC--HhHHHHHHHHHHhhcc
Q 024023 196 NVDPKK----TIFFDDSARNIASAKAA----GLHTVIVGSSVP--VPPADHALNS--IHNIKEAIPEIWEGEG 256 (274)
Q Consensus 196 g~~~~~----~i~VGDs~~Di~~a~~~----G~~~v~v~~~~~--~~~a~~~~~~--l~~l~~~l~~~~~~~~ 256 (274)
|+++++ +++|||+.||++|++.+ |+.+++ ++.. +..|++++.+ .+.+..+|+++.....
T Consensus 214 gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~~ 284 (332)
T 1y8a_A 214 GYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYALKHADVVIISPTAMSEAKVIELFMERKE 284 (332)
T ss_dssp HHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHHHTTCSEEEECSSTHHHHHHHHHHHHHGG
T ss_pred ccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCHHHHhhCcEEecCCCCCHHHHHHHHHHHcCC
Confidence 677788 99999999999999999 998765 4433 5678999877 6778888887765443
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.30 E-value=3.4e-12 Score=108.86 Aligned_cols=70 Identities=13% Similarity=0.169 Sum_probs=54.8
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI 251 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~~~ 251 (274)
+.+|+.++..+++++|++++++++|||+.||++|++.+|+.++ +.++.. +..+++++.+..+ +..+|+++
T Consensus 188 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~-~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~ 261 (268)
T 1nf2_A 188 NVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVA-MENAIEKVKEASDIVTLTNNDSGVSYVLERI 261 (268)
T ss_dssp TCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEE-CTTSCHHHHHHCSEECCCTTTTHHHHHHTTB
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEE-ecCCCHHHHhhCCEEEccCCcchHHHHHHHH
Confidence 4788999999999999999999999999999999999998655 333332 3458888877543 55555543
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.5e-12 Score=115.42 Aligned_cols=73 Identities=15% Similarity=0.167 Sum_probs=61.5
Q ss_pred cccCCCCCHHHHHHHHHHh----------------------CC-----CCCeEEEEcCCh-hcHHHHHHcCCeEEEECCC
Q 024023 177 QRILCKPSLEAIETAIRIA----------------------NV-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSS 228 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~----------------------g~-----~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~ 228 (274)
....|||.+..++.+++.+ |+ +++++++|||+. +||.+|+++|+.++++.+|
T Consensus 241 ~~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G 320 (352)
T 3kc2_A 241 DYTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTG 320 (352)
T ss_dssp CEECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSS
T ss_pred ceEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccC
Confidence 4689999999999887654 22 679999999999 6999999999999999886
Q ss_pred CC-------CCCccccccCHhHHHHHHH
Q 024023 229 VP-------VPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 229 ~~-------~~~a~~~~~~l~~l~~~l~ 249 (274)
.. ...++++++++.++.+++.
T Consensus 321 ~~~~~~~~~~~~pd~vi~~l~el~~~il 348 (352)
T 3kc2_A 321 VYNEGDDLKECKPTLIVNDVFDAVTKTL 348 (352)
T ss_dssp SCCTTCCCTTCCCSEECSSHHHHHHHHH
T ss_pred CCCcccccccCCCCEEECCHHHHHHHHH
Confidence 52 3568999999999988753
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.29 E-value=5.5e-12 Score=108.65 Aligned_cols=71 Identities=17% Similarity=0.127 Sum_probs=55.7
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHH
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIP 249 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~ 249 (274)
...+..|+.++..+++.+|++++++++|||+.||++|++.+|+. +.+.++.. +..+++++.+..+ +..+|+
T Consensus 211 ~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 211 SSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKG-VAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEE-EECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcE-EEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 34567889999999999999999999999999999999999994 55655543 3457888877654 444444
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.29 E-value=7.5e-12 Score=108.41 Aligned_cols=98 Identities=10% Similarity=0.017 Sum_probs=82.5
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHH---HHHHHHH--------cCCCCccceeEecccCCCCCCCCCCCCcccc
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKH---AMEVLGR--------LGLEDCFEGIICFETINPRLQPADNTDGIEN 170 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~---~~~~l~~--------~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~ 170 (274)
..++||+.++|+.| |.+++|+||.+... +...++. +|+ +|+.+++.++..
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~-------------- 250 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQGD-------------- 250 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTTC--------------
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCCC--------------
Confidence 45789999999887 58999999987543 4556777 888 489988877542
Q ss_pred cccCcccccCCCCCHHHHHHHHHHhCCCCCe-EEEEcCChhcHHHHHHcCCeEEEECCC
Q 024023 171 NSFSSNQRILCKPSLEAIETAIRIANVDPKK-TIFFDDSARNIASAKAAGLHTVIVGSS 228 (274)
Q Consensus 171 ~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~-~i~VGDs~~Di~~a~~~G~~~v~v~~~ 228 (274)
.||+|+.+..++++++..+.+ +++|||+.+|+.+|+++|+.++++.||
T Consensus 251 ----------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 251 ----------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp ----------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred ----------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 299999999999999887655 799999999999999999999999987
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.27 E-value=6.5e-12 Score=107.93 Aligned_cols=72 Identities=18% Similarity=0.230 Sum_probs=58.4
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHHHHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIW 252 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~~~~ 252 (274)
.+.+|+.++..+++++|++++++++|||+.||++|++.+|+. +.+.++.. +..|++++.+..+ +..+|+++.
T Consensus 195 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~ 270 (282)
T 1rkq_A 195 KRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVG-VAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV 270 (282)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcE-EEecCCcHHHHhhCCEEecCCCcchHHHHHHHHH
Confidence 357889999999999999999999999999999999999985 44554443 3468888887655 777777664
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.1e-11 Score=107.70 Aligned_cols=73 Identities=14% Similarity=0.192 Sum_probs=58.5
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcccccc-CHh--HHHHHHHHHHh
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN-SIH--NIKEAIPEIWE 253 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~-~l~--~l~~~l~~~~~ 253 (274)
.+.+|+.++..+++.+|++++++++|||+.||++|++.+|+.+ .+.++.. +..+++++. +.. .+..+|++++.
T Consensus 221 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~v-a~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~ 298 (301)
T 2b30_A 221 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSF-AVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFD 298 (301)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEE-ECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeE-EEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHh
Confidence 3578899999999999999999999999999999999999864 4555543 346888887 654 37777776653
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.5e-11 Score=102.50 Aligned_cols=93 Identities=9% Similarity=0.117 Sum_probs=64.9
Q ss_pred hHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCCh----HHHHHHHHHcCCCCccc-eeEecccCCCCCC
Q 024023 89 NDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQ----KHAMEVLGRLGLEDCFE-GIICFETINPRLQ 160 (274)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~----~~~~~~l~~~gl~~~fd-~i~~~~~~~~~~~ 160 (274)
...+.++... ...+++||+.++|+.| |++++|+|+.+. ..+...|+.+|+..+++ .++...+.
T Consensus 88 ~~~w~~wv~~----g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~----- 158 (260)
T 3pct_A 88 PKTWTKWVDA----RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDK----- 158 (260)
T ss_dssp HHHHHHHHHT----TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSC-----
T ss_pred HHHHHHHHHc----CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCC-----
Confidence 4455555544 3468899999988877 699999999765 58888999999988775 45544321
Q ss_pred CCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHH
Q 024023 161 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIAS 214 (274)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~ 214 (274)
..|. ..+..+++.|. .-+++|||+.+|+.+
T Consensus 159 ---------------------~~K~-~~r~~L~~~gy--~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 159 ---------------------SNKS-VRFKQVEDMGY--DIVLFVGDNLNDFGD 188 (260)
T ss_dssp ---------------------SSSH-HHHHHHHTTTC--EEEEEEESSGGGGCG
T ss_pred ---------------------CChH-HHHHHHHhcCC--CEEEEECCChHHcCc
Confidence 2233 44444444454 349999999999987
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.18 E-value=2.3e-11 Score=102.79 Aligned_cols=124 Identities=12% Similarity=0.197 Sum_probs=82.3
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhcc
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGK 99 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (274)
...+||||+||||++....+..... . ...+....+.++...
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~--------~------------------------------~~~f~~~~w~~wv~~- 97 (262)
T 3ocu_A 57 KKKAVVADLNETMLDNSPYAGWQVQ--------N------------------------------NKPFDGKDWTRWVDA- 97 (262)
T ss_dssp CEEEEEECCBTTTEECHHHHHHHHH--------H------------------------------TCCCCHHHHHHHHHH-
T ss_pred CCeEEEEECCCcCCCCchhhhhhcc--------c------------------------------cccCCHHHHHHHHHc-
Confidence 4579999999999994443322110 0 112223344444443
Q ss_pred CCCCCCCCChhHHHHHHhC---CCcEEEEeCCCh----HHHHHHHHHcCCCCccc-eeEecccCCCCCCCCCCCCccccc
Q 024023 100 LPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQ----KHAMEVLGRLGLEDCFE-GIICFETINPRLQPADNTDGIENN 171 (274)
Q Consensus 100 ~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~----~~~~~~l~~~gl~~~fd-~i~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
...+++||+.++|+.| |++++|+|+.+. ..+...|+.+|+..+++ .++...+.
T Consensus 98 ---~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~---------------- 158 (262)
T 3ocu_A 98 ---RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDK---------------- 158 (262)
T ss_dssp ---TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSC----------------
T ss_pred ---CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCC----------------
Confidence 3457889999888877 689999998755 58888999999987764 55554321
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHH
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIAS 214 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~ 214 (274)
..|...+..+.+. |.. -+++|||+.+|+.+
T Consensus 159 ----------~~K~~~r~~l~~~-Gy~--iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 159 ----------SAKAARFAEIEKQ-GYE--IVLYVGDNLDDFGN 188 (262)
T ss_dssp ----------SCCHHHHHHHHHT-TEE--EEEEEESSGGGGCS
T ss_pred ----------CChHHHHHHHHhc-CCC--EEEEECCChHHhcc
Confidence 3445555555444 543 49999999999987
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=5e-11 Score=100.97 Aligned_cols=73 Identities=11% Similarity=0.001 Sum_probs=55.6
Q ss_pred CCCHHHHHHHHHHhCCCC--CeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHh--HHHHHHHHHHhhcc
Q 024023 182 KPSLEAIETAIRIANVDP--KKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIH--NIKEAIPEIWEGEG 256 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~--~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~--~l~~~l~~~~~~~~ 256 (274)
++|+.+++.+++++|+++ +++++|||+.||+.|++.+|+.+++-+... -.++++..+-. .+.++|..+.....
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~~~~~~~~~~~~~gv~~~~~~~~~~~~ 251 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--PEGVLATPAPGPEGFRYAVERYLLPRL 251 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--CTTCEECSSCHHHHHHHHHHHHTTTC-
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--cCCcEEeCCCCchHHHHHHHHHHHhCc
Confidence 678999999999999999 999999999999999999998866544433 46667665533 35556666654433
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.2e-09 Score=91.99 Aligned_cols=62 Identities=10% Similarity=-0.090 Sum_probs=49.7
Q ss_pred CCCCHHHHHHHHHHhCC-CCCeEEEEcCChhcHHHHHHcCCeEEEECCCC-C--CCCccccccCHhH
Q 024023 181 CKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-P--VPPADHALNSIHN 243 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~-~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~-~--~~~a~~~~~~l~~ 243 (274)
+..|+.+++.+++.+|+ .++++++|||+.||++|++.+|+.++ +.++. . +..|++++++..+
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va-~gna~~~~~~~~a~~v~~~~~~ 242 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFI-VGSLKHKKAQNVSSIIDVLEVI 242 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEE-ESSCCCTTEEEESSHHHHHHHH
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEE-eCCCCccccchhceEEeccccc
Confidence 46779999999999998 99999999999999999999998755 44443 2 3457777766543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=9.2e-09 Score=86.32 Aligned_cols=69 Identities=23% Similarity=0.253 Sum_probs=53.1
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CC-------CccccccCHhH--HHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VP-------PADHALNSIHN--IKEAIP 249 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~-------~a~~~~~~l~~--l~~~l~ 249 (274)
+.+|+.++..+++.+|++++++++|||+.||++|++.+|+. +.+.++.. +. .+++++.+..+ +..+|+
T Consensus 160 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~-va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcE-EEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 57889999999999999999999999999999999999986 44544443 22 26788776554 444444
Q ss_pred H
Q 024023 250 E 250 (274)
Q Consensus 250 ~ 250 (274)
+
T Consensus 239 ~ 239 (244)
T 1s2o_A 239 H 239 (244)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.86 E-value=1.8e-08 Score=86.92 Aligned_cols=106 Identities=14% Similarity=0.016 Sum_probs=65.1
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
..+++.||+.++++.| +.+++++|++....++.+++.+|+......+++..-.. +.-.....+.....
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~---------~~~~~~~~~~~~~i 208 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDF---------DENGVLKGFKGELI 208 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEE---------CTTSBEEEECSSCC
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEE---------cccceeEecccccc
Confidence 3467888888887777 69999999999999999999999864333344322100 00001111111111
Q ss_pred --CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHH
Q 024023 180 --LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKA 217 (274)
Q Consensus 180 --~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~ 217 (274)
..|+.+..-.....++.-...+++++|||.||+.|++.
T Consensus 209 ~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~ 248 (297)
T 4fe3_A 209 HVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADG 248 (297)
T ss_dssp CTTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTT
T ss_pred chhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhC
Confidence 12333322223333444466889999999999999774
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.84 E-value=5.8e-09 Score=89.13 Aligned_cols=71 Identities=15% Similarity=0.121 Sum_probs=42.8
Q ss_pred CCCCHHHHHHHHHHhC-CCCCe--EEEEcCChhcHHHHHHcCCeEEEECCCC---C--CC--Ccc-ccccCHh--HHHHH
Q 024023 181 CKPSLEAIETAIRIAN-VDPKK--TIFFDDSARNIASAKAAGLHTVIVGSSV---P--VP--PAD-HALNSIH--NIKEA 247 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g-~~~~~--~i~VGDs~~Di~~a~~~G~~~v~v~~~~---~--~~--~a~-~~~~~l~--~l~~~ 247 (274)
+.+|+.++..+++.+| +++++ +++|||+.||++|++.+|+. +.+.++. . +. .++ +++.+.. .+..+
T Consensus 187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~ 265 (275)
T 1xvi_A 187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLNREGVHLHDEDPARVWRTQREGPEGWREG 265 (275)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC----------------------------
T ss_pred CCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCCccchhhccccCCceeEccCCCchHHHHH
Confidence 5788999999999999 99999 99999999999999999986 5565554 2 11 367 7765543 34455
Q ss_pred HHHHH
Q 024023 248 IPEIW 252 (274)
Q Consensus 248 l~~~~ 252 (274)
|++++
T Consensus 266 l~~~l 270 (275)
T 1xvi_A 266 LDHFF 270 (275)
T ss_dssp -----
T ss_pred HHHHH
Confidence 55544
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.83 E-value=3.1e-10 Score=91.19 Aligned_cols=116 Identities=14% Similarity=0.125 Sum_probs=91.5
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
..+.||+.++|+.++ +.++|+|++....+..+++.++..++|+.+++.++.... |
T Consensus 54 v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~-----------------------k 110 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFH-----------------------R 110 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEE-----------------------T
T ss_pred EEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceec-----------------------C
Confidence 567899999999985 899999999999999999999999999999998866432 2
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHh
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
+.+...++++|.++++|++|||+..++.++.++|+.+ ..|... ..| ..+.+|.++|+.+..
T Consensus 111 ---~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i--~~~~~~--~~D---~eL~~l~~~L~~l~~ 171 (181)
T 2ght_A 111 ---GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV--ASWFDN--MSD---TELHDLLPFFEQLSR 171 (181)
T ss_dssp ---TEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC--CCCSSC--TTC---CHHHHHHHHHHHHTT
T ss_pred ---CcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe--ccccCC--CCh---HHHHHHHHHHHHhCc
Confidence 2355677888999999999999999999999999984 333221 111 345666676666543
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.64 E-value=6.8e-08 Score=86.45 Aligned_cols=106 Identities=10% Similarity=0.009 Sum_probs=69.0
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCc--cceeEecccCCCCCCCCCCCCcccccccCcc--c
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC--FEGIICFETINPRLQPADNTDGIENNSFSSN--Q 177 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~--fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 177 (274)
++++|++.++++.| |++++|+|++....++.+.+.+|+..- -+.|++..-... -++. .++.... +
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~-------~dG~-~tg~~~~~~p 291 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKD-------DEGK-ILPKFDKDFP 291 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEEC-------TTCC-EEEEECTTSC
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEe-------cCCc-eeeeecCccc
Confidence 35789999998887 699999999999999999999886432 245665431000 0011 1222211 2
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcC
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 219 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G 219 (274)
.+.+..|+..++.++.+ ......++++|||.+|++|.++.+
T Consensus 292 ~~~~~gK~~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~~ 332 (385)
T 4gxt_A 292 ISIREGKVQTINKLIKN-DRNYGPIMVGGDSDGDFAMLKEFD 332 (385)
T ss_dssp CCSTHHHHHHHHHHTCC-TTEECCSEEEECSGGGHHHHHHCT
T ss_pred eeCCCchHHHHHHHHHh-cCCCCcEEEEECCHhHHHHHhcCc
Confidence 33444556666665432 234456899999999999999743
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=6.1e-07 Score=82.53 Aligned_cols=118 Identities=19% Similarity=0.134 Sum_probs=77.8
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHc-C-------------CCCccceeEecccCCCCCCCCCCCC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL-G-------------LEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~-g-------------l~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
.+...|.+..+|+.+ | +++++||+....+...++.+ | +.++||.|++.-.-.. =+-+
T Consensus 244 Yv~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~-----FF~~ 317 (555)
T 2jc9_A 244 YVVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPL-----FFGE 317 (555)
T ss_dssp HBCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTG-----GGTT
T ss_pred hcCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCC-----cccC
Confidence 355667888887777 7 99999999999999998887 6 4578999776542110 0000
Q ss_pred ccc------ccccCc-----ccccCCC-CCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHH-HcCCeEEEECC
Q 024023 167 GIE------NNSFSS-----NQRILCK-PSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIVGS 227 (274)
Q Consensus 167 ~~~------~~~~~~-----~~~~~~k-p~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~-~~G~~~v~v~~ 227 (274)
... .++... +....|+ -...-+..+++.+|.+++++++|||+. +||..++ .+||.+++|-.
T Consensus 318 ~~pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViP 392 (555)
T 2jc9_A 318 GTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIP 392 (555)
T ss_dssp CCCEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECT
T ss_pred CCcceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEe
Confidence 000 001000 0000000 000114788888999999999999999 8999997 89999999854
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.41 E-value=6.5e-07 Score=85.33 Aligned_cols=121 Identities=14% Similarity=0.168 Sum_probs=85.2
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |.+++++|+.+...+....+.+|+..++..+. ..
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~------------------------------P~ 506 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL------------------------------PH 506 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC------------------------------TT
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeCC------------------------------HH
Confidence 3567777776666 69999999999999999999999864432221 13
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHHHHHHhhcccc
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIPEIWEGEGEQ 258 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l~~~~~~~~~~ 258 (274)
.|.+.+ +++... +++++|||+.||+.|.+.+|++.++- ++.. ...+|+++ +++..+.+.+.. ....-..
T Consensus 507 ~K~~~v----~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~-~r~~~~~ 579 (645)
T 3j08_A 507 QKSEEV----KKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQL-SRKTMSK 579 (645)
T ss_dssp CHHHHH----HHHTTT-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHH-HHHHHHH
T ss_pred hHHHHH----HHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHH-HHHHHHH
Confidence 334444 444444 88999999999999999999887654 3333 67799998 788888876643 3333334
Q ss_pred hhhhc
Q 024023 259 LEQVI 263 (274)
Q Consensus 259 ~~~~~ 263 (274)
+.|+.
T Consensus 580 i~~nl 584 (645)
T 3j08_A 580 IKQNI 584 (645)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.26 E-value=2.3e-06 Score=82.69 Aligned_cols=122 Identities=14% Similarity=0.174 Sum_probs=85.1
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |++++++|+.+...+..+.+.+|+..++..+. ..
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~------------------------------P~ 584 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL------------------------------PH 584 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC------------------------------TT
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEccCC------------------------------HH
Confidence 4557777776665 79999999999999999999999864332211 13
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHHHHHHhhcccc
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIPEIWEGEGEQ 258 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l~~~~~~~~~~ 258 (274)
.|...+ +++.-. +++++|||+.||+.|.+.+|++.++- ++.. ...+|+++ +++..+...+. +....-..
T Consensus 585 ~K~~~v----~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~-~~r~~~~~ 657 (723)
T 3j09_A 585 QKSEEV----KKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ-LSRKTMSK 657 (723)
T ss_dssp CHHHHH----HHHTTT-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHH-HHHHHHHH
T ss_pred HHHHHH----HHHhcC-CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHH-HHHHHHHH
Confidence 334444 444444 88999999999999999999886654 3333 67899998 78888888665 33334444
Q ss_pred hhhhcc
Q 024023 259 LEQVIQ 264 (274)
Q Consensus 259 ~~~~~~ 264 (274)
+.|+..
T Consensus 658 i~~nl~ 663 (723)
T 3j09_A 658 IKQNIF 663 (723)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.7e-07 Score=76.28 Aligned_cols=114 Identities=11% Similarity=0.022 Sum_probs=83.0
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCC-CccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~-~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
+...||+.++|+.+. +.++|.|++....+..+++.++.. .+|+..++.++....
T Consensus 58 v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~----------------------- 114 (204)
T 3qle_A 58 TAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYK----------------------- 114 (204)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEE-----------------------
T ss_pred EEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEE-----------------------
Confidence 456799999999995 789999999999999999999987 489888877654321
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHH
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
. ..+..-++.+|.++++|++|+|+++-+......|+.+.. |.. .+| +.+.+|.++|+.+.
T Consensus 115 ~---g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~--~~~---~~D---~eL~~L~~~L~~L~ 174 (204)
T 3qle_A 115 D---GVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEP--WNG---EAD---DKLVRLIPFLEYLA 174 (204)
T ss_dssp T---TEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECCC--CCS---SCC---CHHHHHHHHHHHHH
T ss_pred C---CeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEeee--ECC---CCC---hhHHHHHHHHHHHh
Confidence 0 013445667799999999999999988766666655432 211 122 23667777777765
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.09 E-value=4.3e-06 Score=83.51 Aligned_cols=135 Identities=13% Similarity=0.133 Sum_probs=82.6
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc----ceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF----EGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f----d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
++.|++.++++.| |++++++|+.....+..+.+.+|+.... +.++++++.... .|++..+.+... ...
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l-~~~~~~~~~~~~----~v~ 677 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDL-PLAEQREACRRA----CCF 677 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTS-CHHHHHHHHHHC----CEE
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhC-CHHHHHHHHhhC----cEE
Confidence 3457777776666 6999999999999999999999986543 234444332211 000000000000 000
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHH
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 248 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l 248 (274)
.+..|. -...+++.+.-..+.++++||+.||+.|.+.++++.++. .+.. +..+|+++ +++..+...+
T Consensus 678 ~r~~P~--~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i 748 (995)
T 3ar4_A 678 ARVEPS--HKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAV 748 (995)
T ss_dssp ESCCSS--HHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHH
T ss_pred EEeCHH--HHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHH
Confidence 011222 233344444333578999999999999999999987753 4443 45688888 4588887764
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.08 E-value=6.6e-07 Score=79.40 Aligned_cols=82 Identities=17% Similarity=0.188 Sum_probs=63.3
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCC-ccc-eeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 104 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFE-GIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~-~fd-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
.+.+.||+.++|+.+. +.++|.|.+....+..+++.++... +|+ .+++.++.+..
T Consensus 73 ~v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~~--------------------- 131 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSL--------------------- 131 (372)
T ss_dssp EEEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSCS---------------------
T ss_pred EEEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCCc---------------------
Confidence 3567899999999994 7899999999999999999999887 787 56666644321
Q ss_pred CCCCCHHHHHHHHHHh-CCCCCeEEEEcCChhcHHH
Q 024023 180 LCKPSLEAIETAIRIA-NVDPKKTIFFDDSARNIAS 214 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~-g~~~~~~i~VGDs~~Di~~ 214 (274)
+..-|+++ |.+++++++|+|++.-...
T Consensus 132 --------~~KdL~~L~~~dl~~viiiDd~~~~~~~ 159 (372)
T 3ef0_A 132 --------AQKSLRRLFPCDTSMVVVIDDRGDVWDW 159 (372)
T ss_dssp --------SCCCGGGTCSSCCTTEEEEESCSGGGTT
T ss_pred --------ceecHHHhcCCCCceEEEEeCCHHHcCC
Confidence 11224444 8999999999999965533
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=98.05 E-value=4.4e-05 Score=69.30 Aligned_cols=123 Identities=14% Similarity=0.072 Sum_probs=74.6
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHc---------CCCCccceeEecccCCC-CCCCCCCCCccccc
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---------GLEDCFEGIICFETINP-RLQPADNTDGIENN 171 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~---------gl~~~fd~i~~~~~~~~-~~~~~~~~~~~~~~ 171 (274)
+...|.+..+|+.+ |.++.++||++-..+...+..+ .+.++||.|++.-.-.. ..++.-++.-...+
T Consensus 185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~ 264 (470)
T 4g63_A 185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN 264 (470)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTT
T ss_pred hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCC
Confidence 44567888887776 5789999999999988877653 46789999988542100 00000000000011
Q ss_pred ccCcccccCCCCC---HHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHH-cCCeEEEECC
Q 024023 172 SFSSNQRILCKPS---LEAIETAIRIANVDPKKTIFFDDSA-RNIASAKA-AGLHTVIVGS 227 (274)
Q Consensus 172 ~~~~~~~~~~kp~---~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~-~G~~~v~v~~ 227 (274)
+.........+|+ ..-...+.+-+|...++++||||+. .||...+. .||.+++|-.
T Consensus 265 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 325 (470)
T 4g63_A 265 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE 325 (470)
T ss_dssp CCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECT
T ss_pred CcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhH
Confidence 1111100001111 1234556667799999999999999 89777765 6999998843
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.01 E-value=8.8e-06 Score=78.53 Aligned_cols=107 Identities=13% Similarity=0.156 Sum_probs=77.4
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 183 (274)
+.|++.+.++.| |++++++|+.....+..+.+.+|+..++.. -
T Consensus 555 i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~----------------------------------~ 600 (736)
T 3rfu_A 555 IKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAE----------------------------------I 600 (736)
T ss_dssp BCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECS----------------------------------C
T ss_pred chhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEe----------------------------------c
Confidence 456777776666 699999999999999999999998643321 1
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHH
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 248 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l 248 (274)
.|+-...+++++.-....+++|||+.||+.|.+.+|++.++- ++.. ...+|+++ +++..+...+
T Consensus 601 ~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai 668 (736)
T 3rfu_A 601 MPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKAR 668 (736)
T ss_dssp CHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHH
T ss_pred CHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHH
Confidence 233344444544445678999999999999999999887654 4443 55678877 5666666643
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=9.9e-05 Score=64.41 Aligned_cols=107 Identities=13% Similarity=0.003 Sum_probs=63.1
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHc----CCCCccceeEecccCCC-CCCCC------CCCCccc--
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL----GLEDCFEGIICFETINP-RLQPA------DNTDGIE-- 169 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~----gl~~~fd~i~~~~~~~~-~~~~~------~~~~~~~-- 169 (274)
.++|++.++++.| |++++|+|++....++.+.+.+ |+. -+.|++..-... .+.-. +..|+-+
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp--~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~ 220 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAK--PENVIGVTTLLKNRKTGELTTARKQIAEGKYDP 220 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCC--GGGEEEECEEEECTTTCCEECHHHHHHTTCCCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCC--HHHeEeeeeeeeccccccccccccccccccccc
Confidence 5789999998888 6999999999999999998763 443 356666531100 00000 0000000
Q ss_pred -------ccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHH
Q 024023 170 -------NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKA 217 (274)
Q Consensus 170 -------~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~ 217 (274)
.+.....+.+.+..|+..+...+.. |-. .++++|||. .|+.|...
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~-g~~--Pi~a~Gns~dgD~~ML~~ 273 (327)
T 4as2_A 221 KANLDLEVTPYLWTPATWMAGKQAAILTYIDR-WKR--PILVAGDTPDSDGYMLFN 273 (327)
T ss_dssp GGGTTCEEEEEECSSCSSTHHHHHHHHHHTCS-SCC--CSEEEESCHHHHHHHHHH
T ss_pred cccccccccccccccccccCccHHHHHHHHhh-CCC--CeEEecCCCCCCHHHHhc
Confidence 0111122233344556666665522 333 379999995 79999965
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00013 Score=73.11 Aligned_cols=137 Identities=12% Similarity=0.098 Sum_probs=80.0
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc------------------------ceeEecccCCCCC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF------------------------EGIICFETINPRL 159 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f------------------------d~i~~~~~~~~~~ 159 (274)
+.|++.+.++.| |++++++|+.....+..+.+.+|+...- ..++.+++....
T Consensus 600 lr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~- 678 (1028)
T 2zxe_A 600 PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL- 678 (1028)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC-
T ss_pred CChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC-
Confidence 457777776665 7999999999999999999999986310 112222211100
Q ss_pred CCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcccc
Q 024023 160 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHA 237 (274)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~ 237 (274)
.+ +.++.+.. .++ ........|+-...+.+.+.-....++++||+.||+.|.+.++++.++-.++.. +..+|++
T Consensus 679 ~~-~~l~~~~~--~~~-~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~V 754 (1028)
T 2zxe_A 679 ST-EVLDDILH--YHT-EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMI 754 (1028)
T ss_dssp CH-HHHHHHHH--HCS-EEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEE
T ss_pred CH-HHHHHHHh--hCC-cEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEE
Confidence 00 00000000 000 011223344444444444332336799999999999999999999876434544 4568888
Q ss_pred ccC--HhHHHHHH
Q 024023 238 LNS--IHNIKEAI 248 (274)
Q Consensus 238 ~~~--l~~l~~~l 248 (274)
+.+ +..+..++
T Consensus 755 l~~~~~~~I~~~i 767 (1028)
T 2zxe_A 755 LLDDNFASIVTGV 767 (1028)
T ss_dssp ETTCCTHHHHHHH
T ss_pred ecCCCHHHHHHHH
Confidence 754 77666654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.63 E-value=6.9e-05 Score=62.24 Aligned_cols=66 Identities=17% Similarity=0.060 Sum_probs=53.6
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc--CCeEEEECCCCCCCCccccccC---HhHHHHHHHHHHhh
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA--GLHTVIVGSSVPVPPADHALNS---IHNIKEAIPEIWEG 254 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~--G~~~v~v~~~~~~~~a~~~~~~---l~~l~~~l~~~~~~ 254 (274)
+..|..+++.+++.+| +++|||+.||++|.+.+ |..+++-+ . +..|++++.+ -+.+.++|+++...
T Consensus 158 ~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam~N-a--~~~A~~v~~~~~~~~gV~~~l~~~~~~ 228 (239)
T 1u02_A 158 GVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKVGE-G--ETHAKFHVADYIEMRKILKFIEMLGVQ 228 (239)
T ss_dssp TCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEESS-S--CCCCSEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEECC-C--CCcceEEeCCCCCHHHHHHHHHHHHHh
Confidence 4677999999999998 99999999999999999 97766544 3 4678898888 66677777776644
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00014 Score=71.74 Aligned_cols=133 Identities=15% Similarity=0.041 Sum_probs=78.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc-c---eeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF-E---GIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f-d---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
++.|++.+.++.| |++++++|+....-+..+.+.+|+.... + .++++++... ..++-+.... ..
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~---~~el~~~~~~------~~ 605 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMP---GSEVYDFVEA------AD 605 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGG---GGGGGTTTTT------TS
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccCC---HHHHHHHHhh------Ce
Confidence 4568888887777 6999999999999999999999986311 1 0111110000 0000000000 01
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHH
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 248 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l 248 (274)
....-.|+-...+.+.+.-....+.++||+.||..|.+.++++.++- ++.. +..+|+++ +++..+...+
T Consensus 606 V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai 678 (920)
T 1mhs_A 606 GFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDAL 678 (920)
T ss_dssp CEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHH
T ss_pred EEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHH
Confidence 11111222233333333223377999999999999999999997764 4443 45678776 4566666543
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00045 Score=69.28 Aligned_cols=138 Identities=12% Similarity=0.117 Sum_probs=77.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccc------------------------eeEecccCCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFE------------------------GIICFETINPR 158 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd------------------------~i~~~~~~~~~ 158 (274)
++.|++.+.++.| |++++++|+.+...+..+.+.+|+...-. .++.+.+....
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 683 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM 683 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhC
Confidence 3457777777666 69999999999999999999999842110 01111111000
Q ss_pred CCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccc
Q 024023 159 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADH 236 (274)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~ 236 (274)
.+.++.+... ..+. .....-.|+-...+.+.+.-....++++||+.||+.|.+.+|++.++-.++.. +..+|+
T Consensus 684 -~~~~l~~~~~---~~~~-~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~ 758 (1034)
T 3ixz_A 684 -DPSELVEALR---THPE-MVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADM 758 (1034)
T ss_pred -CHHHHHHHHH---hCCc-eEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCE
Confidence 0000000000 0000 01112233333344444333346799999999999999999999876534443 667888
Q ss_pred cccC--HhHHHHHH
Q 024023 237 ALNS--IHNIKEAI 248 (274)
Q Consensus 237 ~~~~--l~~l~~~l 248 (274)
++.+ +..+..++
T Consensus 759 Vl~~~~~~gI~~ai 772 (1034)
T 3ixz_A 759 ILLDDNFASIVTGV 772 (1034)
T ss_pred EeccCCchHHHHHH
Confidence 8754 33444433
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00014 Score=71.55 Aligned_cols=134 Identities=12% Similarity=0.062 Sum_probs=77.4
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCc-c-ceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC-F-EGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~-f-d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
+.|++.+.++.| |++++++|+.....+..+.+.+|+..- + +.++.+.+... .++...-...........
T Consensus 489 ~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~------~~~~~~l~~~~~~~~v~a 562 (885)
T 3b8c_A 489 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDA------NLASIPVEELIEKADGFA 562 (885)
T ss_dssp CCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGT------TSCCSCHHHHHHTSCCEE
T ss_pred cchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeecccccc------ccchhHHHHHHhhCcEEE
Confidence 457777776666 799999999999999999999998531 1 12222221110 000000000000000112
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccC--HhHHHHH
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEA 247 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~--l~~l~~~ 247 (274)
.-.|+-...+.+.+.-....+.++||+.||..+.+.++++.++- .+.. +..+|+++.+ +..+.+.
T Consensus 563 rv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~a 631 (885)
T 3b8c_A 563 GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISA 631 (885)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHH
T ss_pred EECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHH
Confidence 23343333333333223367999999999999999999997754 4433 5568887744 6655543
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.26 E-value=3.8e-05 Score=66.74 Aligned_cols=122 Identities=16% Similarity=0.152 Sum_probs=74.4
Q ss_pred CChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCcc--ceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 107 PDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 107 ~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
..|++.+||+++. +.++|.|.+....+..+++.++....+ ...+..+.... +.. ..+
T Consensus 165 ~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~----------------~~~---~~~ 225 (320)
T 3shq_A 165 MRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAM----------------ISV---HVP 225 (320)
T ss_dssp BCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGC----------------EEE---EET
T ss_pred eCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCcc----------------ccc---ccc
Confidence 4589999999995 889999999999999999999876553 32233221100 000 000
Q ss_pred CCHHHHHHHHHHh-----CCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhHHHHHHHHHH
Q 024023 183 PSLEAIETAIRIA-----NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 183 p~~~~~~~~l~~~-----g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
..+..+..-|+.+ |.+++++++|+|++.-..+....|+... .+... .... =..|.+|.++|..+.
T Consensus 226 ~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~NgI~I~--~~~~~~~~~~~---D~eL~~L~~~L~~L~ 297 (320)
T 3shq_A 226 ERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIR--PFRQAHLNRGT---DTELLKLSDYLRKIA 297 (320)
T ss_dssp TTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGGGEEECC--CCCCHHHHTTT---CCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcCceEEeC--eEcCCCCCCCc---cHHHHHHHHHHHHHh
Confidence 0000122233444 7889999999999988877766665543 22110 0011 234667777777766
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00024 Score=59.65 Aligned_cols=44 Identities=9% Similarity=-0.023 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcC----ChhcHHHHHHcCCeEEEECC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGD----s~~Di~~a~~~G~~~v~v~~ 227 (274)
+..|..+++.+ +|++++++++||| +.||++|.+.+|...+.+.+
T Consensus 195 ~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~N 242 (262)
T 2fue_A 195 GWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 242 (262)
T ss_dssp TCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred CCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecC
Confidence 46778899888 8999999999999 99999999999975555544
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0007 Score=56.43 Aligned_cols=42 Identities=12% Similarity=-0.001 Sum_probs=33.1
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCC----hhcHHHHHHcCCeEEEEC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDS----ARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs----~~Di~~a~~~G~~~v~v~ 226 (274)
+-.|..+++.+++ +++++++|||+ .||++|.+.+|.-.+.+.
T Consensus 185 gv~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~ 230 (246)
T 3f9r_A 185 GWDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT 230 (246)
T ss_dssp TCSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS
T ss_pred CCCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC
Confidence 4566778888887 88999999995 999999998874444443
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.00086 Score=55.58 Aligned_cols=44 Identities=14% Similarity=0.034 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcC----ChhcHHHHHHcCCeEEEECC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGD----s~~Di~~a~~~G~~~v~v~~ 227 (274)
+..|..+++.+ +|++++++++||| +.||++|.+.+|.-.+.+.+
T Consensus 186 ~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~N 233 (246)
T 2amy_A 186 GWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 233 (246)
T ss_dssp TCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred CCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeC
Confidence 45667788777 8999999999999 99999999998874555544
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0018 Score=48.09 Aligned_cols=17 Identities=41% Similarity=0.495 Sum_probs=14.5
Q ss_pred ccEEEEecCCCccCCch
Q 024023 21 YECLLFDLDDTLYPLST 37 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~ 37 (274)
+|+|+||+||||+++..
T Consensus 1 ik~i~~DlDGTL~~~~~ 17 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANT 17 (126)
T ss_dssp CCEEEECSTTTTBCCCC
T ss_pred CCEEEEecCCCCCCCCC
Confidence 47899999999998654
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0022 Score=53.71 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=24.6
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEE 49 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~ 49 (274)
.++|+|+||+||||+++...+.....+++.+
T Consensus 11 ~~~kli~~DlDGTLl~~~~~is~~~~~al~~ 41 (262)
T 2fue_A 11 KERVLCLFDVDGTLTPARQKIDPEVAAFLQK 41 (262)
T ss_dssp --CEEEEEESBTTTBSTTSCCCHHHHHHHHH
T ss_pred cCeEEEEEeCccCCCCCCCcCCHHHHHHHHH
Confidence 3679999999999999777777777776666
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.66 E-value=0.0032 Score=52.08 Aligned_cols=31 Identities=19% Similarity=0.203 Sum_probs=25.8
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEE 49 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~ 49 (274)
|++|+|+||+||||+++...+.....+++.+
T Consensus 4 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~ 34 (246)
T 2amy_A 4 PGPALCLFDVDGTLTAPRQKITKEMDDFLQK 34 (246)
T ss_dssp CCSEEEEEESBTTTBCTTSCCCHHHHHHHHH
T ss_pred CCceEEEEECCCCcCCCCcccCHHHHHHHHH
Confidence 4689999999999999777777777777666
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=95.61 E-value=0.0043 Score=47.16 Aligned_cols=35 Identities=26% Similarity=0.348 Sum_probs=22.7
Q ss_pred hhHHHHHHhC---CCcEEEEeCCCh---HHHHHHHHHcCCC
Q 024023 109 PVLRNLLLSM---PQRKIIFTNADQ---KHAMEVLGRLGLE 143 (274)
Q Consensus 109 ~~~~~~L~~l---~~~~~i~s~~~~---~~~~~~l~~~gl~ 143 (274)
|++.++|+.+ |..++++|+.+. ..+...++..|+.
T Consensus 27 ~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 27 PFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp TTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 3455555544 688999999873 4455566666664
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=95.11 E-value=0.15 Score=42.05 Aligned_cols=78 Identities=14% Similarity=0.143 Sum_probs=60.5
Q ss_pred EEEEeCCChHHHHHHHHHcCCCCcc--ceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCC
Q 024023 122 KIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP 199 (274)
Q Consensus 122 ~~i~s~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~ 199 (274)
-+++|++.---...++=-+|+..+| +.|+++-++ +|.+.|+.+.+++| +.
T Consensus 179 NVLVTs~qLVPaLaK~LLygL~~~fpieNIYSa~ki---------------------------GKesCFerI~~RFG-~k 230 (274)
T 3geb_A 179 NVLVTTTQLIPALAKVLLYGLGSVFPIENIYSATKT---------------------------GKESCFERIMQRFG-RK 230 (274)
T ss_dssp EEEEESSCHHHHHHHHHHTTCTTTSCGGGEEETTTT---------------------------CHHHHHHHHHHHHC-TT
T ss_pred EEEEecCchHHHHHHHHHhhcccceecccccchhhc---------------------------CHHHHHHHHHHHhC-CC
Confidence 4577777665555555566888776 458887643 45889999999998 44
Q ss_pred CeEEEEcCChhcHHHHHHcCCeEEEECC
Q 024023 200 KKTIFFDDSARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 200 ~~~i~VGDs~~Di~~a~~~G~~~v~v~~ 227 (274)
..-++|||+.---++|+..++++.-+..
T Consensus 231 ~~yvvIGDG~eEe~AAk~~n~PFwrI~~ 258 (274)
T 3geb_A 231 AVYVVIGDGVEEEQGAKKHNMPFWRISC 258 (274)
T ss_dssp SEEEEEESSHHHHHHHHHTTCCEEECCS
T ss_pred ceEEEECCCHHHHHHHHHcCCCeEEeec
Confidence 7788999999999999999999987654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=94.53 E-value=0.019 Score=47.30 Aligned_cols=29 Identities=21% Similarity=0.317 Sum_probs=19.6
Q ss_pred ccEEEEecCCCccCC-----chhHHHHHHHHHHH
Q 024023 21 YECLLFDLDDTLYPL-----STGFNLACRRNIEE 49 (274)
Q Consensus 21 ~k~viFDlDGTL~d~-----~~~~~~~~~~~~~~ 49 (274)
+|+|+||+||||++. ...+.....+++.+
T Consensus 1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~ 34 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISD 34 (239)
T ss_dssp -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHH
T ss_pred CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHH
Confidence 478999999999973 22445555555544
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=93.42 E-value=0.03 Score=50.47 Aligned_cols=79 Identities=19% Similarity=0.213 Sum_probs=60.5
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCC-ccce-eEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFEG-IICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~-~fd~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
+.+.||+.++|+.+. +.++|.|.+...++..+++.++... +|.. +++.++.+.. +
T Consensus 82 V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~~---------------------~ 140 (442)
T 3ef1_A 82 IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSL---------------------A 140 (442)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSCS---------------------S
T ss_pred EEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCCc---------------------e
Confidence 466799999999995 7899999999999999999998876 7876 5656544321 0
Q ss_pred CCCCHHHHHHHHHH-hCCCCCeEEEEcCChhcH
Q 024023 181 CKPSLEAIETAIRI-ANVDPKKTIFFDDSARNI 212 (274)
Q Consensus 181 ~kp~~~~~~~~l~~-~g~~~~~~i~VGDs~~Di 212 (274)
.| -|++ +|.+.+.+|+|+|++.-.
T Consensus 141 ~K--------dL~~ll~rdl~~vvIIDd~p~~~ 165 (442)
T 3ef1_A 141 QK--------SLRRLFPCDTSMVVVIDDRGDVW 165 (442)
T ss_dssp CC--------CGGGTCSSCCTTEEEEESCSGGG
T ss_pred ee--------ehHHhcCCCcceEEEEECCHHHh
Confidence 12 1333 388899999999999654
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=92.84 E-value=0.028 Score=46.58 Aligned_cols=31 Identities=32% Similarity=0.295 Sum_probs=26.1
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEE 49 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~ 49 (274)
|++|+|+||+||||+++...+.....+++.+
T Consensus 2 M~~kli~~DlDGTLl~~~~~i~~~~~~~l~~ 32 (246)
T 3f9r_A 2 MKRVLLLFDVDGTLTPPRLCQTDEMRALIKR 32 (246)
T ss_dssp CCSEEEEECSBTTTBSTTSCCCHHHHHHHHH
T ss_pred CCceEEEEeCcCCcCCCCCccCHHHHHHHHH
Confidence 4589999999999999887777777777766
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=86.29 E-value=0.63 Score=41.15 Aligned_cols=28 Identities=21% Similarity=0.414 Sum_probs=19.2
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHH
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEE 49 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~ 49 (274)
+|.|+||+|||+++.+..|..+ .-.+..
T Consensus 1 ~~~~~fdvdgv~~~~~~~~d~~-~ltv~~ 28 (384)
T 1qyi_A 1 MKKILFDVDGVFLSEERCFDVS-ALTVYE 28 (384)
T ss_dssp CCEEEECSBTTTBCSHHHHHHH-HHHHHH
T ss_pred CceEEEecCceeechhhhccHH-HHHHHH
Confidence 4789999999999945444443 334444
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=85.29 E-value=0.6 Score=38.83 Aligned_cols=45 Identities=24% Similarity=0.223 Sum_probs=33.1
Q ss_pred hhHHHHHH---hCCCcEEEEeC---CChHHHHHHHHHcCCC-CccceeEecc
Q 024023 109 PVLRNLLL---SMPQRKIIFTN---ADQKHAMEVLGRLGLE-DCFEGIICFE 153 (274)
Q Consensus 109 ~~~~~~L~---~l~~~~~i~s~---~~~~~~~~~l~~~gl~-~~fd~i~~~~ 153 (274)
|++.+.|+ ..|.+++++|| .+...+...++.+|+. ..++.++++.
T Consensus 33 ~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~~~ 84 (284)
T 2hx1_A 33 PGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIISSG 84 (284)
T ss_dssp TTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEEHH
T ss_pred hhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEcHH
Confidence 44445444 44799999997 5567788888999998 7777887764
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=81.03 E-value=3.6 Score=35.72 Aligned_cols=48 Identities=21% Similarity=0.169 Sum_probs=33.0
Q ss_pred CChhHHHHHHh---CCCcEEEEeCCC---hHHHHHHHH-HcCCCCccceeEeccc
Q 024023 107 PDPVLRNLLLS---MPQRKIIFTNAD---QKHAMEVLG-RLGLEDCFEGIICFET 154 (274)
Q Consensus 107 ~~~~~~~~L~~---l~~~~~i~s~~~---~~~~~~~l~-~~gl~~~fd~i~~~~~ 154 (274)
++|++.++|+. .|.+++++||++ .......+. .+|+.-..+.|+++-.
T Consensus 30 ~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~ 84 (352)
T 3kc2_A 30 PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHT 84 (352)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTG
T ss_pred eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHH
Confidence 44566655554 479999999875 345555565 6898766778887753
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 274 | ||||
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 3e-14 | |
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 1e-10 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 1e-09 | |
| d2fdra1 | 222 | c.108.1.6 (A:3-224) Hypothetical protein Atu0790 { | 1e-08 | |
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 1e-08 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-08 | |
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 2e-08 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 1e-07 | |
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 4e-07 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 4e-07 | |
| d2go7a1 | 204 | c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S | 1e-06 | |
| d2hsza1 | 224 | c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G | 2e-06 | |
| d2gfha1 | 247 | c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas | 4e-06 | |
| d1x42a1 | 230 | c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A | 5e-06 | |
| d1te2a_ | 218 | c.108.1.6 (A:) Phosphatase YniC {Escherichia coli | 8e-06 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 9e-06 | |
| d2hdoa1 | 207 | c.108.1.6 (A:1-207) Phosphoglycolate phosphatase { | 2e-05 | |
| d1zrna_ | 220 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse | 2e-05 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 5e-05 | |
| d2hcfa1 | 228 | c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C | 8e-05 | |
| d1yv9a1 | 253 | c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En | 5e-04 | |
| d2o2xa1 | 209 | c.108.1.19 (A:8-216) Hypothetical protein Mll2559 | 6e-04 | |
| d2fpwa1 | 161 | c.108.1.19 (A:3-163) Histidine biosynthesis bifunc | 0.003 |
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 67.9 bits (164), Expect = 3e-14
Identities = 31/248 (12%), Positives = 63/248 (25%), Gaps = 46/248 (18%)
Query: 20 NYECLLFDLDDTLYPLS----TGFNLACRRNIEEFMSQHLHIDESE-------------V 62
NY L D++ T+ P+S T F + + + Q +
Sbjct: 2 NYSTYLLDIEGTVCPISFVKETLFPYF-TNKVPQLVQQDTRDSPVSNILSQFHIDNKEQL 60
Query: 63 PRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLP---YEKLKPDPVLRNLLLSMP 119
LEL + + GY + + + + + +K +
Sbjct: 61 QAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSV 120
Query: 120 QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179
+ + + Q L L +G T
Sbjct: 121 KAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGK---------------------- 158
Query: 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPAD-HAL 238
K ++ +R + +F D+ + +A G+ T + P D
Sbjct: 159 --KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKY 216
Query: 239 NSIHNIKE 246
N +
Sbjct: 217 QVYKNFET 224
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 57.6 bits (137), Expect = 1e-10
Identities = 37/234 (15%), Positives = 70/234 (29%), Gaps = 19/234 (8%)
Query: 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL 80
++ +LFDLD + + A + EE ++ + + + RE
Sbjct: 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEI---GINGVDRQFNEQLKGVSREDSLQKILD 58
Query: 81 KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL 140
A + Y K+ D ++ + Q + K A
Sbjct: 59 LADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIA------- 111
Query: 141 GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 200
+ P L N G + + KP+ + A V P
Sbjct: 112 --------LASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPS 163
Query: 201 KTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK-EAIPEIWE 253
++I +DS I + K +G + VG + + + E + E+W
Sbjct: 164 ESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVWL 217
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 55.2 bits (131), Expect = 1e-09
Identities = 33/248 (13%), Positives = 70/248 (28%), Gaps = 21/248 (8%)
Query: 19 ANYECLLFDLDDTLYPLS----TGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHG 74
A +L D++ T P++ F N++E++ H +E + L E
Sbjct: 5 AEVTVILLDIEGTTTPIAFVKDILFPYI-EENVKEYLQTHWEEEECQQDVSLLRKQAEED 63
Query: 75 TTMAGLKAV--GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQK- 131
+ G + D+ + + + + L Q +
Sbjct: 64 AHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGR 123
Query: 132 -------HAMEVLGRLGLEDCFEGIIC---FETINPRLQPADNTDGIENNSFSSNQRILC 181
+ + + I E + D +E + +I
Sbjct: 124 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGH 183
Query: 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV---GSSVPVPPADHAL 238
K E+ +F D R ++A+ A +H +V G++
Sbjct: 184 KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYY 243
Query: 239 NSIHNIKE 246
+ I + E
Sbjct: 244 SLITSFSE 251
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 52.2 bits (123), Expect = 1e-08
Identities = 29/243 (11%), Positives = 65/243 (26%), Gaps = 32/243 (13%)
Query: 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL 80
++ ++FD D L R + E I E+ + ++
Sbjct: 2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEA---GYPISVEEMGERFAGMTWKNILLQVES 58
Query: 81 KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL 140
+A + + + E+ LS + H ++++
Sbjct: 59 EASIPLSASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTK 118
Query: 141 GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 200
+ + S KP + V P
Sbjct: 119 VGLKPYFAPHIY-------------------SAKDLGADRVKPKPDIFLHGAAQFGVSPD 159
Query: 201 KTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP----------ADHALNSIHNIKEAIPE 250
+ + +DS I A+AAG+ + + P A+ ++ + ++ I
Sbjct: 160 RVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAA 219
Query: 251 IWE 253
+ E
Sbjct: 220 MAE 222
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 52.1 bits (123), Expect = 1e-08
Identities = 31/208 (14%), Positives = 54/208 (25%), Gaps = 10/208 (4%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 83
FDLD L A RR + L + + + E T +
Sbjct: 3 AAFDLDGVL--ALPSIAGAFRR-----SEEALALPRDFLLGAYQTEFPEGPTEQLMKGKI 55
Query: 84 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 143
+ + N A L + G
Sbjct: 56 TFSQWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFT 115
Query: 144 DCFEGIICFETINPRLQPADNTDGIEN---NSFSSNQRILCKPSLEAIETAIRIANVDPK 200
C + + R A + S Q + KP + + P
Sbjct: 116 TCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPN 175
Query: 201 KTIFFDDSARNIASAKAAGLHTVIVGSS 228
+ +F DD N+ A+ G+ T++V ++
Sbjct: 176 EVVFLDDFGSNLKPARDMGMVTILVHNT 203
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 52.5 bits (125), Expect = 2e-08
Identities = 34/236 (14%), Positives = 71/236 (30%), Gaps = 27/236 (11%)
Query: 42 ACRRNIEEFMSQHLHIDESE-------VPRMCLELYREHGTTMAGLKAVGYEFDNDEF-H 93
+EEF + LH+ ++ + + E+Y+E + V + F
Sbjct: 146 NIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKT 205
Query: 94 AFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGII 150
+++ ++ L+P ++ LL + I T + LGL FE
Sbjct: 206 GYIYQEII---LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADF 262
Query: 151 CF---ETINPRLQPADNTDGIENNSFSSNQ-RILCKPSLEAIETAIRIANVDPKKTIFFD 206
+ + + N FS + V+
Sbjct: 263 IATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVG 322
Query: 207 DSARNIASAKAAGLHTVIV----GSSVPVPP-----ADHALNSIHNIKEAIPEIWE 253
DS ++ SA+ G + AD+ +N + ++ + + E
Sbjct: 323 DSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE 378
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 50.9 bits (120), Expect = 2e-08
Identities = 27/208 (12%), Positives = 58/208 (27%), Gaps = 20/208 (9%)
Query: 25 LFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVG 84
+FDL + + + + + + + + + +
Sbjct: 4 IFDLGNVIVDI----------DFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEIS 53
Query: 85 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLED 144
E + + L YE+ Q + + M L G
Sbjct: 54 DEAFAEALCHEMALPLSYEQF----------SHGWQAVFVALRPEVIAIMHKLREQGHRV 103
Query: 145 CFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIF 204
+ ++ + S + KP + ++ P T+F
Sbjct: 104 VVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVF 163
Query: 205 FDDSARNIASAKAAGLHTVIVGSSVPVP 232
FDD+A NI A G+ +++V +P
Sbjct: 164 FDDNADNIEGANQLGITSILVKDKTTIP 191
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.0 bits (115), Expect = 1e-07
Identities = 32/221 (14%), Positives = 57/221 (25%), Gaps = 42/221 (19%)
Query: 24 LLFDLDDTLY---------------PLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLE 68
+FDLD L L G + + + +
Sbjct: 5 AVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIP 64
Query: 69 LYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNA 128
L E+ + V + F + +P +L I TN
Sbjct: 65 LMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNT 124
Query: 129 DQKHAMEVLGR----LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 184
E G L+ F+ +I + KP
Sbjct: 125 WLDDRAERDGLAQLMCELKMHFDFLIESCQVGMV-----------------------KPE 161
Query: 185 LEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225
+ + + P + +F DD N+ A+ G+ T++V
Sbjct: 162 PQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 202
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 47.9 bits (112), Expect = 4e-07
Identities = 20/202 (9%), Positives = 49/202 (24%), Gaps = 16/202 (7%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 83
++FD TL+ + + + R + ++ L +
Sbjct: 5 VVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTRE 64
Query: 84 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 143
+ + L ++ + + A L
Sbjct: 65 ALAYTLGTLGLEPD----------ESFLADMAQAYNRLTPYPDAAQCLA------ELAPL 108
Query: 144 DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTI 203
+ L + S + + + KP ++ + V P + +
Sbjct: 109 KRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL 168
Query: 204 FFDDSARNIASAKAAGLHTVIV 225
F + ++ AK G V
Sbjct: 169 FVSSNGFDVGGAKNFGFSVARV 190
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 47.0 bits (110), Expect = 4e-07
Identities = 28/232 (12%), Positives = 59/232 (25%), Gaps = 46/232 (19%)
Query: 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG 79
Y ++DL TL A + + + D V + T A
Sbjct: 2 KYHDYIWDLGGTLLDNYETSTAAFVETLALY---GITQDHDSVYQALKVSTPFAIETFAP 58
Query: 80 LKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGR 139
E + + + +E + D +
Sbjct: 59 NLENFLEKYKENEARELEHPILFEGVSDL------------------LEDISNQG----- 95
Query: 140 LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP 199
+ + + +S+ KP+ E++ +
Sbjct: 96 ----GRHFLVSHRNDQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISS 151
Query: 200 KKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 251
+ D +I + +AAGL T + SI N+++ + +I
Sbjct: 152 --GLVIGDRPIDIEAGQAAGLDTHLF-------------TSIVNLRQ-VLDI 187
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 46.0 bits (107), Expect = 1e-06
Identities = 26/226 (11%), Positives = 60/226 (26%), Gaps = 27/226 (11%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 83
++DLD TL +F + D+ +V + +
Sbjct: 4 FIWDLDGTLLDSYEAILSGIEETFAQF---SIPYDKEKVREFIFKYSVQDLLVRVAEDRN 60
Query: 84 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 143
++ A ++ P R +L + I K
Sbjct: 61 LDVEVLNQVRAQ-SLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAF------- 112
Query: 144 DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTI 203
+ + +S + KPS EA + ++ T
Sbjct: 113 --------------TILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTY 158
Query: 204 FFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP 249
+ D ++ A+ +G+ ++ +H + ++ +I
Sbjct: 159 YIGDRTLDVEFAQNSGIQSINFLE--STYEGNHRIQALADISRIFE 202
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Score = 45.7 bits (106), Expect = 2e-06
Identities = 40/244 (16%), Positives = 67/244 (27%), Gaps = 38/244 (15%)
Query: 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG 79
++ + FDLD TL L+ +++ +
Sbjct: 3 QFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWA 62
Query: 80 LKAVGYEFDNDEFHAFVHGKLPYEKLKPDP-------VLRNL--LLSMPQRKIIFTNADQ 130
K E DEF F Y V L L + + TN
Sbjct: 63 CKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPT 122
Query: 131 KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190
KH +L G++ F ++ KP
Sbjct: 123 KHVQPILTAFGIDHLFSEMLG-----------------------GQSLPEIKPHPAPFYY 159
Query: 191 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV--GSSVPVP----PADHALNSIHNI 244
+ PK+ +F DS +I +A +AG V + G + +P D + +I
Sbjct: 160 LCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI 219
Query: 245 KEAI 248
+
Sbjct: 220 LKIT 223
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Score = 44.5 bits (103), Expect = 4e-06
Identities = 34/244 (13%), Positives = 74/244 (30%), Gaps = 22/244 (9%)
Query: 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEV------PRMCLELYRE 72
+ + FDLD+TL + I+ S++ + +E+E+ ++ E +
Sbjct: 4 SRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHP 63
Query: 73 HGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKH 132
+ T + ++ +E E + E+ + Q I+
Sbjct: 64 YSTCITDVRTSHWEEAIQETKGGADNRKLAEEC-----YFLWKSTRLQHMILA-----DD 113
Query: 133 AMEVLGRLGLEDCFEGIIC-FETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 191
+L L E + A + ++ KP+
Sbjct: 114 VKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHC 173
Query: 192 IRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV---GSSVPVPPADHALNSIHNIKEA 247
+ V P + D+ I AGL + VP+ + + ++ E
Sbjct: 174 CDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLE- 232
Query: 248 IPEI 251
+P +
Sbjct: 233 LPAL 236
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 44.5 bits (103), Expect = 5e-06
Identities = 29/235 (12%), Positives = 65/235 (27%), Gaps = 15/235 (6%)
Query: 23 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA 82
+ FD TL + + E ++ + +L RE + AG
Sbjct: 4 AVFFDFVGTLLSVEGEAKTHLKIMEEVL--GDYPLNPKTLLDEYEKLTREAFSNYAGK-- 59
Query: 83 VGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGL 142
Y D + K + L M QR +EVL L
Sbjct: 60 -PYRPIRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYP----EVVEVLKSLKG 114
Query: 143 EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS--LEAIETAIRIANVDPK 200
+ I +T +S ++++ + +
Sbjct: 115 KYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEE 174
Query: 201 KTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP----ADHALNSIHNIKEAIPEI 251
D+ ++ +K G+ ++++ D ++ + + + + E+
Sbjct: 175 AVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDEL 229
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Score = 43.7 bits (101), Expect = 8e-06
Identities = 29/226 (12%), Positives = 69/226 (30%), Gaps = 25/226 (11%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 83
+FD+D L ++ A + + I EL G +
Sbjct: 6 AIFDMDGLLIDSEPLWDRAELDVMASL---GVDISRRN------ELPDTLGLRI------ 50
Query: 84 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 143
+ + +++ + R + L R ++ + + G L
Sbjct: 51 -DMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGL 109
Query: 144 DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTI 203
+ ++ + + S+ + KP + VDP +
Sbjct: 110 ASA----SPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV 165
Query: 204 FFDDSARNIASAKAAGLHTVIVGSSVPVPP-----ADHALNSIHNI 244
+DS + ++KAA + +++V + A+ L+S+ +
Sbjct: 166 ALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 211
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 42.5 bits (99), Expect = 9e-06
Identities = 18/110 (16%), Positives = 32/110 (29%), Gaps = 2/110 (1%)
Query: 131 KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190
EVLGRL + + + + + I + E
Sbjct: 49 PEVPEVLGRLQSLGVPVAAAS--RTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFER 106
Query: 191 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 240
V + +FFDD RNI G+ + + + + L +
Sbjct: 107 LHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLET 156
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Score = 42.2 bits (97), Expect = 2e-05
Identities = 35/231 (15%), Positives = 67/231 (29%), Gaps = 31/231 (13%)
Query: 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG 79
Y+ L+FD+D TL + R + + ++ + + E T G
Sbjct: 2 TYQALMFDIDGTLTNSQPAYTTVMREVLATY---GKPFSPAQAQKT-FPMAAEQAMTELG 57
Query: 80 LKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGR 139
+ A ++ ++ + +L P L R I T+ + +
Sbjct: 58 IAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRS 117
Query: 140 LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP 199
I + KP + TA+ NV P
Sbjct: 118 YPFMMRMAVTISADDTPK-----------------------RKPDPLPLLTALEKVNVAP 154
Query: 200 KKTIFFDDSARNIASAKAAGLHTVIV----GSSVPVPPADHALNSIHNIKE 246
+ +F DS + +A+AA + + + H +I E
Sbjct: 155 QNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILE 205
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Score = 42.2 bits (97), Expect = 2e-05
Identities = 24/230 (10%), Positives = 58/230 (25%), Gaps = 17/230 (7%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 83
+ FDL TL+ + R E F + I + +
Sbjct: 5 IAFDLYGTLFD----VHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQ 60
Query: 84 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 143
E + L L + ++ + G
Sbjct: 61 ATEDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSP 120
Query: 144 DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTI 203
+ ++ + + D ++ + L + +L +D +
Sbjct: 121 QSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQAL----------GLDRSAIL 170
Query: 204 FFDDSARNIASAKAAGLHTVIV--GSSVPVPPADHALNSIHNIKEAIPEI 251
F +A + A+ G T + +V + +++ + E+
Sbjct: 171 FVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRA-VVEL 219
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 41.1 bits (95), Expect = 5e-05
Identities = 29/234 (12%), Positives = 62/234 (26%), Gaps = 30/234 (12%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 83
++ D D T+ NI M + + L + + +
Sbjct: 7 IICDFDGTI---------TMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGL 57
Query: 84 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRL 140
+E +FV E K R + + + +I + + +L +
Sbjct: 58 LPSSLKEEITSFVL-----EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI 112
Query: 141 GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 200
+D C + D I + S + + I + +
Sbjct: 113 VEKDRI---YCNHAS-------FDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQ 162
Query: 201 KTIFFDDSARNIASAKAAGLHTVIVGSSVPV---PPADHALNSIHNIKEAIPEI 251
I DS ++ +AK + L + I++ I +
Sbjct: 163 YIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENV 216
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Score = 40.5 bits (93), Expect = 8e-05
Identities = 25/239 (10%), Positives = 58/239 (24%), Gaps = 28/239 (11%)
Query: 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEV-----PRMCLELYREHGTTMA 78
+LFD+D TL + + + E + + E+ G A
Sbjct: 5 VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERA 64
Query: 79 GLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLG 138
+ ++ + + A + E + +R + + +
Sbjct: 65 EIADK-FDKAKETYIALFRERARREDITLLEGVR-----ELLDALSSRSDVLLGLLTGNF 118
Query: 139 RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD 198
+ D D E + + AN
Sbjct: 119 EASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTG-----------ANYS 167
Query: 199 PKKTIFFDDSARNIASAKAAGLHTVIVGS------SVPVPPADHALNSIHNIKEAIPEI 251
P + + D+ +I A+ ++ V + + + E + I
Sbjct: 168 PSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASI 226
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Score = 38.5 bits (88), Expect = 5e-04
Identities = 37/253 (14%), Positives = 72/253 (28%), Gaps = 28/253 (11%)
Query: 20 NYECLLFDLDDTLYPLSTGFNLACR--RNIEE------FMSQHLHIDESEVPRMCLEL-- 69
+Y+ L DLD T+Y R ++E F++ + V +
Sbjct: 1 DYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFD 60
Query: 70 --YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKII--- 124
A L + Y + + + P ++
Sbjct: 61 IHVPASLVYTATLATIDYMKEANRGKKVFVIGEAGLIDLILEAGFEWDETNPDYVVVGLD 120
Query: 125 --FTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182
+ A + + L T L A + + + + K
Sbjct: 121 TELSYEKVVLATLAIQKGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGK 180
Query: 183 PSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIVGSSV---------PVP 232
P +E AI V+ ++ I D+ I S G+ +++V S P P
Sbjct: 181 PKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTP 240
Query: 233 PADHALNSIHNIK 245
P + ++S+
Sbjct: 241 P-TYVVDSLDEWT 252
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Score = 37.6 bits (86), Expect = 6e-04
Identities = 19/166 (11%), Positives = 44/166 (26%), Gaps = 8/166 (4%)
Query: 83 VGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGL 142
Y D E ++ + + I A + L
Sbjct: 38 TDYPSDPAEIVLRPQMLPAIATANRA---GIPVVVVTNQSGIARGYFGWSAFAAVNGRVL 94
Query: 143 EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKT 202
E E + + + + + KP+ + A + +D +++
Sbjct: 95 ELLREEGVFVDMVLACAYHEAGVGP-----LAIPDHPMRKPNPGMLVEAGKRLALDLQRS 149
Query: 203 IFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 248
+ D ++ + K AGL + A+ + + E
Sbjct: 150 LIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELG 195
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Score = 35.6 bits (81), Expect = 0.003
Identities = 17/126 (13%), Positives = 44/126 (34%), Gaps = 2/126 (1%)
Query: 102 YEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 161
++KL +P + LL + + + + + + F+G Q
Sbjct: 26 FDKLAFEPGVIPQLLKLQKAGYKLVM--ITNQDGLGTQSFPQADFDGPHNLMMQIFTSQG 83
Query: 162 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 221
+ + +++ KP ++ +E + +D + D A +I A+ G++
Sbjct: 84 VQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGIN 143
Query: 222 TVIVGS 227
+
Sbjct: 144 GLRYDR 149
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 274 | |||
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.96 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.96 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.96 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.95 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.95 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.95 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.95 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.95 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.95 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.94 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.94 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.93 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.93 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.92 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.89 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.85 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.85 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.84 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.83 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.82 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.81 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.79 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.78 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.75 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.74 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.74 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.73 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.71 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.7 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.66 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.64 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.58 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.52 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.45 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.31 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.28 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.25 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.18 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.16 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.12 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.08 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.08 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.06 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.0 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.97 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.92 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.87 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.72 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.49 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.44 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.4 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 98.14 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.13 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.98 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.67 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 97.44 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.32 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 95.5 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 94.41 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 93.97 |
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.96 E-value=9e-30 Score=207.99 Aligned_cols=195 Identities=19% Similarity=0.261 Sum_probs=151.7
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcH-HHHHHhcCCC-ChHHHHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTM-AGLKAVGYEF-DNDEFHAFV 96 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~ 96 (274)
|++|+|+||+||||+|+.+.+..++.+ +++++|.+.... ...+.++... ..+...+... ..+.+...+
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMRE-----VLATYGKPFSPA-----QAQKTFPMAAEQAMTELGIAASEFDHFQAQY 70 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHH-----HHHTTTCCCCHH-----HHHHHTTSCHHHHHHHTTCCGGGHHHHHHHH
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHHH-----HHHHcCCCCCHH-----HHHHHhcchhhhhhhccccchhhHHHHHHHh
Confidence 468999999999999988877777764 677778875442 2333343332 2333333221 122332222
Q ss_pred hccC--CCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccc
Q 024023 97 HGKL--PYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 172 (274)
Q Consensus 97 ~~~~--~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~ 172 (274)
.+.. .....+++||+.++|+.++ .+++|+||+....+...++++|+..+|+.++++++.+.+
T Consensus 71 ~~~~~~~~~~~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-------------- 136 (207)
T d2hdoa1 71 EDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKR-------------- 136 (207)
T ss_dssp HHHHTTCGGGCEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCC--------------
T ss_pred hhhhcccccccccccchhhhhhhhcccccccccccccccccccccccccccccccccccccccccc--------------
Confidence 2211 1246788999999999994 778899999999999999999999999999999988875
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHHHH
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKE 246 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l~~ 246 (274)
||+|+++..+++++|++|++|++|||+.+|+.+|+++|+.++++.+|.. ...++++++++.||.+
T Consensus 137 ---------KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~ 205 (207)
T d2hdoa1 137 ---------KPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILE 205 (207)
T ss_dssp ---------TTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGG
T ss_pred ---------hhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHh
Confidence 9999999999999999999999999999999999999999999987664 4568899999988865
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.96 E-value=2.1e-29 Score=207.19 Aligned_cols=198 Identities=18% Similarity=0.233 Sum_probs=150.0
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH---------HHHHhcCCCC
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA---------GLKAVGYEFD 88 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 88 (274)
|.++|+|+||+||||+|+.+.+..++.+ .++.+|.+....... ....+.... ..........
T Consensus 1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (224)
T d2hsza1 1 MTQFKLIGFDLDGTLVNSLPDLALSINS-----ALKDVNLPQASENLV----MTWIGNGADVLSQRAVDWACKQAEKELT 71 (224)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHHH----HHHCSSCHHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCCCEEEEeCCCCcccCHHHHHHHHHH-----HHHHCCCCCCcHHHH----HHHhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 4579999999999999988877777664 566677654432221 111111111 1111112222
Q ss_pred hHHHH-------HHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCC
Q 024023 89 NDEFH-------AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR 158 (274)
Q Consensus 89 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~ 158 (274)
.+.+. ..... .......++|++.++|+.| |.+++++||++...+...++.+|+..+|+.++++++.+..
T Consensus 72 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~ 150 (224)
T d2hsza1 72 EDEFKYFKRQFGFYYGE-NLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEI 150 (224)
T ss_dssp HHHHHHHHHHHHHHHHH-HTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSC
T ss_pred HHHHHHHHHHHHHHHHH-hhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccccc
Confidence 22111 11111 1234567899999988887 5899999999999999999999999999999999998875
Q ss_pred CCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CC
Q 024023 159 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VP 232 (274)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~ 232 (274)
||+|+.+..++++++++++++++|||+.+|+.+|+++|+.++++.++.. ..
T Consensus 151 -----------------------kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~ 207 (224)
T d2hsza1 151 -----------------------KPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQS 207 (224)
T ss_dssp -----------------------TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGG
T ss_pred -----------------------cccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhc
Confidence 9999999999999999999999999999999999999999999988764 45
Q ss_pred CccccccCHhHHHHHH
Q 024023 233 PADHALNSIHNIKEAI 248 (274)
Q Consensus 233 ~a~~~~~~l~~l~~~l 248 (274)
+++++++++.+|.++|
T Consensus 208 ~~d~~v~~l~dL~~ii 223 (224)
T d2hsza1 208 KPDWIFDDFADILKIT 223 (224)
T ss_dssp CCSEEESSGGGGGGGT
T ss_pred CCCEEECCHHHHHHhh
Confidence 6899999999998765
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.96 E-value=2.2e-29 Score=205.73 Aligned_cols=197 Identities=16% Similarity=0.203 Sum_probs=149.1
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcC-CCChH----HH
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGY-EFDND----EF 92 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~ 92 (274)
|.++|+|+||+||||+|+...+..++.+ .++.+|++...... +....+........... ....+ .+
T Consensus 1 M~~ik~VifD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (210)
T d2ah5a1 1 MTSITAIFFDLDGTLVDSSIGIHNAFTY-----TFKELGVPSPDAKT----IRGFMGPPLESSFATCLSKDQISEAVQIY 71 (210)
T ss_dssp CTTCCEEEECSBTTTEECHHHHHHHHHH-----HHHHHTCCCCCHHH----HHHTSSSCHHHHHHTTSCGGGHHHHHHHH
T ss_pred CCCCCEEEEeCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHH----HHHhhhcchhhhccccccchhhHHHHHHH
Confidence 4578999999999999988888777765 55566766543322 22222333222211111 11111 11
Q ss_pred HHHHhccCCCCCCCCChhHHHHHHhC--CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccc
Q 024023 93 HAFVHGKLPYEKLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 170 (274)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~L~~l--~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~ 170 (274)
...+.. .......++|++.++|+.+ +.+++|+|+++...++..++.+|+..+|+.++++++.+
T Consensus 72 ~~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~-------------- 136 (210)
T d2ah5a1 72 RSYYKA-KGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEA-------------- 136 (210)
T ss_dssp HHHHHH-TGGGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSC--------------
T ss_pred HHHHHh-hhhhcccchhHHHHHHhhhhcccchhhcccccchhhhHHHHhhcccccccccccccccc--------------
Confidence 222222 1234567899999999998 47889999999999999999999999999999888653
Q ss_pred cccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHhHH
Q 024023 171 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNI 244 (274)
Q Consensus 171 ~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~~l 244 (274)
||+|+.+..+++++|++|+++++|||+.+|+.+|+++|++++++.+|.. ..+|+++++++.||
T Consensus 137 -----------~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el 205 (210)
T d2ah5a1 137 -----------PHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV 205 (210)
T ss_dssp -----------CSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred -----------cccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence 8999999999999999999999999999999999999999999998764 56799999999999
Q ss_pred HHHHH
Q 024023 245 KEAIP 249 (274)
Q Consensus 245 ~~~l~ 249 (274)
.++|+
T Consensus 206 ~~~le 210 (210)
T d2ah5a1 206 LAYFQ 210 (210)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 88753
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=6e-28 Score=198.23 Aligned_cols=193 Identities=18% Similarity=0.173 Sum_probs=141.6
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcC-CCChHHHH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGY-EFDNDEFH 93 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~ 93 (274)
++|+++||+||||+|+.+.+..++++ +++.+|++...... +....+..... ...... ......+.
T Consensus 2 ~i~a~iFD~DGTL~dt~~~~~~a~~~-----~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (218)
T d1te2a_ 2 QILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRRNE----LPDTLGLRIDMVVDLWYARQPWNGPSRQEVV 72 (218)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHH-----HHHHTTCCGGGGGG----SCCCTTCCHHHHHHHHHHHSCCSSSCHHHHH
T ss_pred cceEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHH----HHHHhCCCccchhhhhhhcccccchhHHHHH
Confidence 68999999999999977766666654 55666765443211 11111111110 111111 11111111
Q ss_pred ----HHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 94 ----AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 94 ----~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
+.+.... .....++||+.++|+.| +++++|+||++...+...++.+|+.++|+.++++++++..
T Consensus 73 ~~~~~~~~~~~-~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~-------- 143 (218)
T d1te2a_ 73 ERVIARAISLV-EETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYS-------- 143 (218)
T ss_dssp HHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCC--------
T ss_pred HHHHHHHHHhh-hccccccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccc--------
Confidence 1111111 12346789999998888 5899999999999999999999999999999999988875
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCccccccCH
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSI 241 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~~~l 241 (274)
||+|+.+..+++++|++|+++++|||+.+|+.+|+++|++++++.++.. ...++++++++
T Consensus 144 ---------------Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l 208 (218)
T d1te2a_ 144 ---------------KPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSL 208 (218)
T ss_dssp ---------------TTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCG
T ss_pred ---------------hhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECCh
Confidence 9999999999999999999999999999999999999999999976654 35689999999
Q ss_pred hHHH
Q 024023 242 HNIK 245 (274)
Q Consensus 242 ~~l~ 245 (274)
.||.
T Consensus 209 ~el~ 212 (218)
T d1te2a_ 209 TELT 212 (218)
T ss_dssp GGCC
T ss_pred hhCC
Confidence 9984
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.95 E-value=9.3e-28 Score=195.33 Aligned_cols=192 Identities=18% Similarity=0.233 Sum_probs=141.4
Q ss_pred cEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-HHHh--cCCCChHHHHHHHhc
Q 024023 22 ECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-LKAV--GYEFDNDEFHAFVHG 98 (274)
Q Consensus 22 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~ 98 (274)
++++||+||||+|+.+.+..++.+ .++++|++...... .... .+..... +... ......+.+......
T Consensus 2 ~a~iFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEAILSGIEE-----TFAQFSIPYDKEKV-REFI---FKYSVQDLLVRVAEDRNLDVEVLNQVRAQ 72 (204)
T ss_dssp CEEEECTBTTTEECHHHHHHHHHH-----HHHHHTCCCCHHHH-HHHH---HHSCHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred EEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCHHHH-HHhh---cccccccccccccchhhhhHHHHHHHHHH
Confidence 689999999999988877777664 56667776543211 1111 1111111 1110 112223332222211
Q ss_pred c--CCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccccccc
Q 024023 99 K--LPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 173 (274)
Q Consensus 99 ~--~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~ 173 (274)
. .......++||+.++|+.| +++++|+||++.. ....++++|+.++|+.++++++.+..
T Consensus 73 ~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~~gl~~~f~~i~~s~~~~~~--------------- 136 (204)
T d2go7a1 73 SLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKDLGVESYFTEILTSQSGFVR--------------- 136 (204)
T ss_dssp HHTTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHHTCGGGEEEEECGGGCCCC---------------
T ss_pred HHHhhcccCcccchHHhhhhcccccccchhhhcccchh-hhhhhhhccccccccccccccccccc---------------
Confidence 1 1234567899999998888 5899999998764 56689999999999999999988875
Q ss_pred CcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHH
Q 024023 174 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 248 (274)
Q Consensus 174 ~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l 248 (274)
||+|+++..+++++|++|++|++|||+.+|+.+|+++|++++++.++. ..+++.++++.++.+++
T Consensus 137 --------Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~--~~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 137 --------KPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST--YEGNHRIQALADISRIF 201 (204)
T ss_dssp --------TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS--CTTEEECSSTTHHHHHT
T ss_pred --------chhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCC--CCcCeecCCHHHHHHHh
Confidence 999999999999999999999999999999999999999999998775 56888899999988765
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.95 E-value=1.2e-26 Score=193.90 Aligned_cols=214 Identities=16% Similarity=0.231 Sum_probs=148.1
Q ss_pred CCCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHh-c-------CcHH---------H
Q 024023 17 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREH-G-------TTMA---------G 79 (274)
Q Consensus 17 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~-------~~~~---------~ 79 (274)
.|.++|+|+||+||||+|+...+...+.+.+.. +....+..... ........... . .... .
T Consensus 2 ~m~~IKaviFD~dGTL~d~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (247)
T d2gfha1 2 GLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKL-LQSKYHYKEEA-EIICDKVQVKLSKECFHPYSTCITDVRTSHWEEA 79 (247)
T ss_dssp ECCCCCEEEECCBTTTBCHHHHHHHHHHHHHHH-HHHTTCCCTHH-HHHHHHHHHHHHTCCCC----CHHHHHHHHHHHH
T ss_pred CCCCCcEEEEcCCCCcCcChHHHHHHHHHHHHH-hccccCcHHHH-HHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHH
Confidence 367899999999999999766666666554443 33333333221 11111111110 0 0000 0
Q ss_pred HHHhcCCCChHHHH-HHHh--ccCCCCCCCCChhHHHHHHhC--CCcEEEEeCCChHHHHHHHHHcCCCCccceeEeccc
Q 024023 80 LKAVGYEFDNDEFH-AFVH--GKLPYEKLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFET 154 (274)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~L~~l--~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~ 154 (274)
+...........+. ..+. .........++||+.++|+.| +.+++++||++.......++..|+..+||.++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~ 159 (247)
T d2gfha1 80 IQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGE 159 (247)
T ss_dssp HHHHHCSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGG
T ss_pred HHHhccccchHHHHHHHHHHHHHhhhccCccCccHHHHHHHhhcccceEEeecccchhhhhhhhhccccccccccccccc
Confidence 11111222221111 1110 000123467899999999888 478899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEE-ECCCCC--
Q 024023 155 INPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVI-VGSSVP-- 230 (274)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~-v~~~~~-- 230 (274)
.+.. ||+|+++..+++++|++|+++++|||+. +|+.+|+++|+++++ .+....
T Consensus 160 ~~~~-----------------------KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~ 216 (247)
T d2gfha1 160 QKEE-----------------------KPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVP 216 (247)
T ss_dssp SSSC-----------------------TTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCC
T ss_pred cccc-----------------------hhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCc
Confidence 8875 9999999999999999999999999997 899999999998654 433222
Q ss_pred ---CCCccccccCHhHHHHHHHHHHhhc
Q 024023 231 ---VPPADHALNSIHNIKEAIPEIWEGE 255 (274)
Q Consensus 231 ---~~~a~~~~~~l~~l~~~l~~~~~~~ 255 (274)
...|++++.++.+|.++|+.+-..+
T Consensus 217 ~~~~~~p~~~i~~l~eL~~ll~~i~~~~ 244 (247)
T d2gfha1 217 LTSSPMPHYMVSSVLELPALLQSIDCKV 244 (247)
T ss_dssp SSCCCCCSEEESSGGGHHHHHHHHTTCC
T ss_pred ccccCCCCEEECCHHHHHHHHHHHhhhc
Confidence 4668999999999999998876553
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.95 E-value=1.3e-27 Score=196.65 Aligned_cols=200 Identities=16% Similarity=0.198 Sum_probs=150.0
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHH-hcCcHH-----HHHHhcCCCChHHHHH
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYRE-HGTTMA-----GLKAVGYEFDNDEFHA 94 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~ 94 (274)
+|+|+||+||||+|+...+..++.+ .++++|++.... .+... .|.... .....+.....+.+.+
T Consensus 2 ~kaviFD~DGtL~dt~~~~~~a~~~-----~~~~~g~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEIIAAQVESR-----LLTEAGYPISVE-----EMGERFAGMTWKNILLQVESEASIPLSASLLDK 71 (222)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHH-----HHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHHH
T ss_pred ceEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHH-----HHHHHHhhhccccccccccccccccccccchhH
Confidence 6899999999999987777666664 666778775431 12221 223221 1223344444333322
Q ss_pred H---HhccCCCCCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEe-cccCCCCCCCCCCCCcccc
Q 024023 95 F---VHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC-FETINPRLQPADNTDGIEN 170 (274)
Q Consensus 95 ~---~~~~~~~~~~~~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~-~~~~~~~~~~~~~~~~~~~ 170 (274)
. +.... .....++||+.++|+.++.+.+++|+.....+...++.+|+..+|+.+++ +++.+..
T Consensus 72 ~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~------------ 138 (222)
T d2fdra1 72 SEKLLDMRL-ERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGAD------------ 138 (222)
T ss_dssp HHHHHHHHH-HHHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTT------------
T ss_pred HHHHHHHHh-hhccchhhhHHHHhhhccccceeeeecchhhhhhhhcccccccccceeeccccccccc------------
Confidence 2 11111 23467899999999999999999999999999999999999999998554 4443221
Q ss_pred cccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----------CCCccccccC
Q 024023 171 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----------VPPADHALNS 240 (274)
Q Consensus 171 ~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----------~~~a~~~~~~ 240 (274)
..||+|+.+..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ..+|++++++
T Consensus 139 ---------~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~ 209 (222)
T d2fdra1 139 ---------RVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISR 209 (222)
T ss_dssp ---------CCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESC
T ss_pred ---------ccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECC
Confidence 249999999999999999999999999999999999999999999988763 2359999999
Q ss_pred HhHHHHHHHHHH
Q 024023 241 IHNIKEAIPEIW 252 (274)
Q Consensus 241 l~~l~~~l~~~~ 252 (274)
+.+|..+|.++.
T Consensus 210 l~eL~~ll~~l~ 221 (222)
T d2fdra1 210 MQDLPAVIAAMA 221 (222)
T ss_dssp GGGHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 999999887764
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.95 E-value=2.9e-27 Score=195.99 Aligned_cols=125 Identities=19% Similarity=0.316 Sum_probs=114.3
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 104 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
...++||+.++|+.|+ ++++++||++.......++.+|+.++||.++++++.+..
T Consensus 98 ~~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~----------------------- 154 (230)
T d1x42a1 98 YGELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFF----------------------- 154 (230)
T ss_dssp HCCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBC-----------------------
T ss_pred hCcccccHHHHHHHhhccCceeeeeccccccchhhhccccccccccccccccccccc-----------------------
Confidence 3578899999999884 789999999999999999999999999999999998875
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHHHHHHHHH
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEI 251 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l~~~l~~~ 251 (274)
||+|+.+..+++++|++|++|++|||+. +|+.+|+++|+.+++++++.. ...++++++|+.+|.++|+++
T Consensus 155 KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~l 229 (230)
T d1x42a1 155 KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDEL 229 (230)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHHHHH
T ss_pred chhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHHHHc
Confidence 9999999999999999999999999996 899999999999999976554 457899999999999999875
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.95 E-value=6.7e-27 Score=196.85 Aligned_cols=127 Identities=13% Similarity=0.106 Sum_probs=113.6
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc-ceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f-d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
....++||+.++|+.| +++++|+||.+...+...++.+|+.++| |.++++++.+..
T Consensus 96 ~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~-------------------- 155 (257)
T d1swva_ 96 RYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAG-------------------- 155 (257)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCC--------------------
T ss_pred ccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccccccccccccc--------------------
Confidence 3457899999999988 4889999999999999999999999987 888999988765
Q ss_pred cCCCCCHHHHHHHHHHhCCCC-CeEEEEcCChhcHHHHHHcCCeEEEECCCCC---------------------------
Q 024023 179 ILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------------------------- 230 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~-~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--------------------------- 230 (274)
||+|+.+..+++++|+.| ++|++|||+.+|+.+|+++|+.+|++.+|..
T Consensus 156 ---KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (257)
T d1swva_ 156 ---RPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNR 232 (257)
T ss_dssp ---TTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHH
T ss_pred ---ccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHH
Confidence 999999999999999964 8999999999999999999999999988753
Q ss_pred --CCCccccccCHhHHHHHHHHHH
Q 024023 231 --VPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 231 --~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
..+|+|+++++.||.++|+.+.
T Consensus 233 l~~~gad~vi~~l~eL~~ii~~~~ 256 (257)
T d1swva_ 233 FVENGAHFTIETMQELESVMEHIE 256 (257)
T ss_dssp HHHTTCSEEESSGGGHHHHHHHHT
T ss_pred HHhCCCCEEECCHHHHHHHHHHHh
Confidence 2359999999999999988763
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.94 E-value=1.3e-25 Score=186.84 Aligned_cols=126 Identities=17% Similarity=0.357 Sum_probs=114.2
Q ss_pred CCCCCChhHHHHHHhC-CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 103 EKLKPDPVLRNLLLSM-PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l-~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
....++|++.++|+.+ +..+.++|+++...+...++..|+..+||.++++++.+..
T Consensus 90 ~~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~----------------------- 146 (245)
T d1qq5a_ 90 NRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVF----------------------- 146 (245)
T ss_dssp GSCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCC-----------------------
T ss_pred cccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhhccccccccccccccccccc-----------------------
Confidence 4567899999999997 4788899999999999999999999999999999999875
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----------------------------CCC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----------------------------VPP 233 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----------------------------~~~ 233 (274)
||+|++|..+++++|++|++|++|||+.+|+.+|+++|+++|+++.... ...
T Consensus 147 KP~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (245)
T d1qq5a_ 147 KPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEA 226 (245)
T ss_dssp TTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCC
T ss_pred CccHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCC
Confidence 9999999999999999999999999999999999999999999974321 346
Q ss_pred ccccccCHhHHHHHHHHH
Q 024023 234 ADHALNSIHNIKEAIPEI 251 (274)
Q Consensus 234 a~~~~~~l~~l~~~l~~~ 251 (274)
||++++++.+|.++|+.+
T Consensus 227 pd~~i~~l~el~~lv~~~ 244 (245)
T d1qq5a_ 227 PDFVVPALGDLPRLVRGM 244 (245)
T ss_dssp CSEEESSGGGHHHHHHHH
T ss_pred CCEEECCHHHHHHHHHhh
Confidence 999999999999988765
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.94 E-value=6.9e-27 Score=193.33 Aligned_cols=208 Identities=14% Similarity=0.138 Sum_probs=147.7
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCC-----cchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHH
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHID-----ESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAF 95 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (274)
.|+|+||+||||+|+...+..++.+++.+......... ...............+......... .....+.+...
T Consensus 2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 80 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADK-FDKAKETYIAL 80 (228)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHH-HHHHHHHHHHH
T ss_pred ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHHHHHhcCchHHHHHHHHHHhCCChHHHHHH-HHHHHHHHHHH
Confidence 47899999999999888888777765544321111110 0001111122222222222211110 00112223333
Q ss_pred HhccCCCCCCCCChhHHHHHHhC---C-CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccccc
Q 024023 96 VHGKLPYEKLKPDPVLRNLLLSM---P-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 171 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~L~~l---~-~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
+..........++||+.++|+.| + .+++|+||++...+...++.+|+.++||.++++++...+
T Consensus 81 ~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~------------- 147 (228)
T d2hcfa1 81 FRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDR------------- 147 (228)
T ss_dssp HHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSG-------------
T ss_pred HHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccc-------------
Confidence 33333345668899999999887 3 578899999999999999999999999999999987765
Q ss_pred ccCcccccCCCCCHHHHHHHHHHh---CCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHh
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIH 242 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~---g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~ 242 (274)
||+|..+...+..+ +++|++|++|||+.+|+.+|+++|++++++.+|.. ..+|+++++++.
T Consensus 148 ----------k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~ 217 (228)
T d2hcfa1 148 ----------NELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFA 217 (228)
T ss_dssp ----------GGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSC
T ss_pred ----------cchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHH
Confidence 89888877666665 78999999999999999999999999999988764 567999999999
Q ss_pred HHHHHHHHHH
Q 024023 243 NIKEAIPEIW 252 (274)
Q Consensus 243 ~l~~~l~~~~ 252 (274)
+|.++|..+.
T Consensus 218 el~~~l~~l~ 227 (228)
T d2hcfa1 218 ETDEVLASIL 227 (228)
T ss_dssp CHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998774
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.93 E-value=1e-26 Score=191.15 Aligned_cols=198 Identities=18% Similarity=0.268 Sum_probs=137.3
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHH-hcCcHHH-----HHHhcCCCChHHHH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYRE-HGTTMAG-----LKAVGYEFDNDEFH 93 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~ 93 (274)
|+|+|+||+||||+|+...+..++.+ ++..+|++..... +... .+..... ....+.....+.+.
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKA-----LAEEIGINGVDRQ-----FNEQLKGVSREDSLQKILDLADKKVSAEEFK 70 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHH-----HHHHTTCCCCCHH-----HHTTTTTCCHHHHHHHHHTTSSSCCCHHHHH
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHH-----HHHHcCCCCChHH-----HHHHHhhccchhhhhhccccccccchhhhhh
Confidence 58999999999999977666666654 5566676544311 1111 1111111 11112233333322
Q ss_pred H-------HHhccC-CCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC
Q 024023 94 A-------FVHGKL-PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 162 (274)
Q Consensus 94 ~-------~~~~~~-~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~ 162 (274)
. .+.... ......++||+.++|+.| +.+++++|++.. ....++.+|+.++|+.++++++.+.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~~~---- 144 (221)
T d1o08a_ 71 ELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVAAS---- 144 (221)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSSSC----
T ss_pred hHHHHHHhhccccccccccccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccccccccccccc----
Confidence 1 111111 123567899999999888 477888888644 57788999999999999999988875
Q ss_pred CCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHh
Q 024023 163 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIH 242 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~ 242 (274)
||+|+.++.+++++|++|++|++|||+.+|+.+|+++|+++|+++++.....+..+++++.
T Consensus 145 -------------------KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~ 205 (221)
T d1o08a_ 145 -------------------KPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTS 205 (221)
T ss_dssp -------------------TTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHCSSSEEESSGG
T ss_pred -------------------ccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChhhcccccEEcCCcc
Confidence 9999999999999999999999999999999999999999999988765455555555554
Q ss_pred HHH-HHHHHHH
Q 024023 243 NIK-EAIPEIW 252 (274)
Q Consensus 243 ~l~-~~l~~~~ 252 (274)
++. +.|++++
T Consensus 206 ~~~~~~l~el~ 216 (221)
T d1o08a_ 206 HYTLEFLKEVW 216 (221)
T ss_dssp GCCHHHHHHHH
T ss_pred cCCHHHHHHHH
Confidence 432 3344443
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.93 E-value=3e-25 Score=181.90 Aligned_cols=121 Identities=19% Similarity=0.294 Sum_probs=108.3
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
...+++++.++++.+ +.+++++|++........++..++..+||.++++++.+..
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~---------------------- 148 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVY---------------------- 148 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCC----------------------
T ss_pred cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeecc----------------------
Confidence 356778887777766 5889999999999999999999999999999999998875
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCccccccCHhHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKEA 247 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~~~l~~l~~~ 247 (274)
||.|+.+..+++++|++|++|++|||+..|+.+|+++|++++++.++.. ...|+++++++.+|.++
T Consensus 149 -KP~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 149 -KPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp -TTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred -ccHHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHhh
Confidence 9999999999999999999999999999999999999999999975543 45689999999998763
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.92 E-value=5.9e-25 Score=176.58 Aligned_cols=172 Identities=16% Similarity=0.184 Sum_probs=125.8
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH-HHHHhcCC--CChHHHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-GLKAVGYE--FDNDEFHAF 95 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~ 95 (274)
|++|+|+||+||||+|+...+..++.+ +++.+|++.... ......+.... .+...... ...+.+.+.
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~-----~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVE-----TLALYGITQDHD-----SVYQALKVSTPFAIETFAPNLENFLEKYKEN 70 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHH-----HHHHHHHHCHHHHHHHHCTTCTTHHHHHHHH
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHH-----HHHHcCCCccHH-----HHHhhhhccchhhhhhhhHHHHHHHHHHHHH
Confidence 578999999999999977777666654 566778775432 12222222222 12222111 112223222
Q ss_pred HhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccc
Q 024023 96 VHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 172 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~ 172 (274)
.... .....++||+.++|+.+ +.+++|+||++.... ..++.+++..+||.++++++++..
T Consensus 71 ~~~~--~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~-------------- 133 (187)
T d2fi1a1 71 EARE--LEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFKR-------------- 133 (187)
T ss_dssp HHHH--TTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCCC--------------
T ss_pred HHHH--hhcCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccccccccccccccc--------------
Confidence 2221 24567889999998766 599999999877655 578999999999999999988765
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCC
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 228 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~ 228 (274)
||+|+.+..+++++++ +++++|||+.+|+.+|+++|++++++.++
T Consensus 134 ---------KP~p~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~ 178 (187)
T d2fi1a1 134 ---------KPNPESMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSI 178 (187)
T ss_dssp ---------TTSCHHHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred ---------CCCHHHHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 9999999999999987 45999999999999999999999998763
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=6.6e-23 Score=169.96 Aligned_cols=119 Identities=13% Similarity=0.097 Sum_probs=102.0
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEec-ccCCCCCCCCCCCCcccccccCcccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF-ETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
....++||+.++|+.| +++++|+||++.......++..|+.++|+...+. ++...
T Consensus 124 ~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--------------------- 182 (253)
T d1zs9a1 124 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIG--------------------- 182 (253)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGC---------------------
T ss_pred cccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccc---------------------
Confidence 3567899999999988 5999999999999999999999999988865444 44443
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHhHH
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNI 244 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~~l 244 (274)
+||+|+++..+++++|++|++|++|||+.+|+.+|+++|++++++.++.. ...++++++||.||
T Consensus 183 --~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 183 --HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp --CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred --cCCCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence 49999999999999999999999999999999999999999999975443 24567789998886
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.85 E-value=5.2e-22 Score=162.37 Aligned_cols=103 Identities=17% Similarity=0.225 Sum_probs=90.3
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCC----ChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcc
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNA----DQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 176 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~----~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (274)
...++|++.++|+.| +.+++++|++ ........+...|+.++||.++++++++.+
T Consensus 95 ~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~------------------ 156 (222)
T d1cr6a1 95 ARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMI------------------ 156 (222)
T ss_dssp TCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCC------------------
T ss_pred cCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCC------------------
Confidence 457889999999888 4889999974 334556667778999999999999998875
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||+|+++..+++++|++|++|+||||+.+|+.+|+++|+++++|.++.
T Consensus 157 -----KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~ 204 (222)
T d1cr6a1 157 -----KPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTA 204 (222)
T ss_dssp -----TTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSS
T ss_pred -----CCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcc
Confidence 999999999999999999999999999999999999999999997754
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.85 E-value=3.8e-20 Score=150.98 Aligned_cols=117 Identities=13% Similarity=0.178 Sum_probs=92.4
Q ss_pred CCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHH-----------HHHcCCCCccceeEecccCCCCCCCCCCCCccccc
Q 024023 103 EKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEV-----------LGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 171 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~-----------l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
....+++++.+++.... ...+.++......... ++.+|+.++|+.+++++..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~~-------------- 158 (225)
T d2g80a1 94 IKAPVYADAIDFIKRKK-RVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGK-------------- 158 (225)
T ss_dssp CCBCCCHHHHHHHHHCS-CEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCC--------------
T ss_pred ccccchhhHHHHHhhHH-hhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccCC--------------
Confidence 34567899999988764 4566677665544433 345688899999998876542
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHH
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNI 244 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l 244 (274)
||+|.+|..+++++|++|++|++|||+.+|+.+|+++|++++++..... ...+..++++|++|
T Consensus 159 ----------KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 159 ----------KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225 (225)
T ss_dssp ----------TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred ----------CCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence 9999999999999999999999999999999999999999999975443 33455567887764
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.84 E-value=1.9e-21 Score=152.83 Aligned_cols=99 Identities=16% Similarity=0.236 Sum_probs=87.7
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCCh-HHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQ-KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~-~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
..+.++||+.++|+.| |++++|+|+++. ......++.+++..+|+.+.+..
T Consensus 43 ~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~~------------------------- 97 (164)
T d1u7pa_ 43 QNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYP------------------------- 97 (164)
T ss_dssp CEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEESS-------------------------
T ss_pred cccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeeccc-------------------------
Confidence 4578999999999888 589999998766 45667789999998888876643
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||+|..+..+++++|++|+++++|||+..|+.+|+++|+.++++.+|.
T Consensus 98 ---kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~ 145 (164)
T d1u7pa_ 98 ---GSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGM 145 (164)
T ss_dssp ---SCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSCC
T ss_pred ---CCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC
Confidence 999999999999999999999999999999999999999999998874
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=7e-21 Score=154.94 Aligned_cols=102 Identities=19% Similarity=0.190 Sum_probs=87.1
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChH----HHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcc
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQK----HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 176 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~----~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (274)
...++|++.++|..| +.+++++||.... .........++.++||.++++++.+.+
T Consensus 97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~------------------ 158 (225)
T d1zd3a1 97 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMV------------------ 158 (225)
T ss_dssp HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCC------------------
T ss_pred cCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccc------------------
Confidence 356789999988887 5889999986543 333344456778899999999988875
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCC
Q 024023 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 228 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~ 228 (274)
||+|++|..+++++|++|+++++|||+.+|+.+|+++|++++++.++
T Consensus 159 -----KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~ 205 (225)
T d1zd3a1 159 -----KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 205 (225)
T ss_dssp -----TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred -----hhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence 99999999999999999999999999999999999999999998764
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=8.8e-21 Score=150.87 Aligned_cols=102 Identities=21% Similarity=0.401 Sum_probs=89.1
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHc-CCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL-GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~-gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
..+++++.+++..+ +.+++++|++........+..+ ++..+|+.++++++.+..
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~---------------------- 140 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMR---------------------- 140 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCC----------------------
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeeccccccc----------------------
Confidence 46778888887666 5889999998877776666665 788899999999988875
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||+|++++.+++++|++|++|++|||+.+|+++|+++|+.++++..+.
T Consensus 141 -Kp~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 141 -KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp -TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred -ccchHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 999999999999999999999999999999999999999999997653
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=1.2e-19 Score=144.95 Aligned_cols=133 Identities=18% Similarity=0.161 Sum_probs=94.4
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChH---------------HHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQK---------------HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~---------------~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
++++||+.++|+.| +++++++||.+.- .....+...|.. ++.++.+......
T Consensus 26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~cp~~p~~-------- 95 (182)
T d2gmwa1 26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQG-------- 95 (182)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTC--------
T ss_pred eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccc--ccceeeccccccc--------
Confidence 46888999988887 5899999997631 122222333332 3443332211110
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeE-EEECCCCC-----CCCccccccC
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP-----VPPADHALNS 240 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~-v~v~~~~~-----~~~a~~~~~~ 240 (274)
...........+||+|.++..+++++++++++++||||+.+|+++|+++|+.+ +++.++.. ...+++++++
T Consensus 96 ---~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~ 172 (182)
T d2gmwa1 96 ---SVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS 172 (182)
T ss_dssp ---SSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC
T ss_pred ---ccccccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECC
Confidence 11122233345799999999999999999999999999999999999999976 56776654 3459999999
Q ss_pred HhHHHHHHHH
Q 024023 241 IHNIKEAIPE 250 (274)
Q Consensus 241 l~~l~~~l~~ 250 (274)
+.|+.++|++
T Consensus 173 l~dl~~~ikk 182 (182)
T d2gmwa1 173 LADLPQAIKK 182 (182)
T ss_dssp GGGHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 9999998863
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.79 E-value=4.2e-19 Score=144.60 Aligned_cols=131 Identities=12% Similarity=0.177 Sum_probs=90.1
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCCh---------------HHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~---------------~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
+.++||+.++|+.| |++++|+||.+. ......++..|.. ++.++.+......
T Consensus 47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~~-------- 116 (209)
T d2o2xa1 47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAG-------- 116 (209)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTC--------
T ss_pred eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccc--cceEEEecccccc--------
Confidence 46789999998888 699999998541 2223334444442 4555544322111
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccC---HhH
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS---IHN 243 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~---l~~ 243 (274)
.+.........+||+|.++..+++++++++++++||||+.+|+.+|+++|++++++.++.....+++.+.+ +.+
T Consensus 117 ---~~~~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~~~~~~~~~~~~~~e 193 (209)
T d2o2xa1 117 ---VGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSE 193 (209)
T ss_dssp ---CSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHH
T ss_pred ---cccccccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcccCCccccCccchhH
Confidence 11122223344699999999999999999999999999999999999999999999888764444554444 444
Q ss_pred HHHHH
Q 024023 244 IKEAI 248 (274)
Q Consensus 244 l~~~l 248 (274)
+.+++
T Consensus 194 ~~dll 198 (209)
T d2o2xa1 194 LGDLL 198 (209)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.78 E-value=2.9e-19 Score=146.56 Aligned_cols=137 Identities=12% Similarity=0.037 Sum_probs=99.1
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccce-eEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG-IICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
.++++|++.++++.| +.+++++|++....++.+++++|+.++|.. .+..++.. ............
T Consensus 73 ~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~-----------~~~~~~~~~~~~ 141 (226)
T d2feaa1 73 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDY-----------IHIDWPHSCKGT 141 (226)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSB-----------CEEECTTCCCTT
T ss_pred ccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCc-----------ceeccccccccc
Confidence 456889999998888 589999999999999999999988755421 11111000 001112233344
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC----CCCCccccccCHhHHHHHHHHHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV----PVPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~----~~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
.+++++..+..+++++++++++++|||||.+|+.||++||+.++. .+.. ....+...++++.++...|+.+.
T Consensus 142 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~-~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 217 (226)
T d2feaa1 142 CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR-DYLLNECREQNLNHLPYQDFYEIRKEIENVK 217 (226)
T ss_dssp CCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC-HHHHHHHHHTTCCEECCSSHHHHHHHHHTSH
T ss_pred cccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEe-cchHHHHHHcCCCeeecCCHHHHHHHHHHHH
Confidence 568889999999999999999999999999999999999976543 2211 13344566889999988877663
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.75 E-value=5.9e-19 Score=142.10 Aligned_cols=130 Identities=16% Similarity=0.219 Sum_probs=98.0
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
...+++++.+.++.+ +...+++|+.....+....+..+...++...+..++... ..........
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~ 139 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKL-------------TGDVEGEVLK 139 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE-------------EEEEECSSCS
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccccc-------------cccccccccc
Confidence 346778888887776 588899999999999999998888877766655543221 1122222334
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcccccc--CHhHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAI 248 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~--~l~~l~~~l 248 (274)
+++++..+..+++.+++.++++++||||.||++|++.+|+++++ + +.. +..|+++++ ++.++.++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-n-a~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 140 ENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-C-AKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp TTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-S-CCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred cccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-C-CCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 67889999999999999999999999999999999999998765 3 332 577999998 455665543
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=5.6e-19 Score=138.07 Aligned_cols=101 Identities=20% Similarity=0.352 Sum_probs=74.8
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCC---------------hHHHHHHHHHcCCCCccceeEec-----ccCCCCCC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICF-----ETINPRLQ 160 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~---------------~~~~~~~l~~~gl~~~fd~i~~~-----~~~~~~~~ 160 (274)
.+.++||+.++|+.| +++++++||.+ .......+...|+. ++.++.+ ++...
T Consensus 28 ~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~i~~~~~~~~~~~~~--- 102 (161)
T d2fpwa1 28 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDC--- 102 (161)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSS---
T ss_pred HceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccc--cceeeeccccccccccc---
Confidence 457889999988887 69999999965 12334455555654 3443333 33333
Q ss_pred CCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 161 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+||+|.++..+++++|++|++++||||+.+|+.+|+++|+++++++.+.
T Consensus 103 --------------------~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~ 151 (161)
T d2fpwa1 103 --------------------RKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 151 (161)
T ss_dssp --------------------STTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred --------------------cccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence 4999999999999999999999999999999999999999999997654
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=2.5e-19 Score=149.95 Aligned_cols=66 Identities=26% Similarity=0.305 Sum_probs=59.4
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIK 245 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l~ 245 (274)
.+||+|+++..+++++|++|++|++|||++ +||.+|+++|+++++|.+|.. ...|||+++|+.||.
T Consensus 174 ~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~ 248 (250)
T d2c4na1 174 VGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp CSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred cccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence 469999999999999999999999999997 699999999999999988763 345799999999863
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=3.8e-18 Score=139.75 Aligned_cols=130 Identities=12% Similarity=0.096 Sum_probs=88.9
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
...++||+.++++.| |.+++|+|++....+..+++.+|+..+ .+++.+ .... .++...+.....+...
T Consensus 80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~--~v~an~-~~~~------~~G~~~g~~~~~p~~~ 150 (217)
T d1nnla_ 80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFANR-LKFY------FNGEYAGFDETQPTAE 150 (217)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEEC-EEEC------TTSCEEEECTTSGGGS
T ss_pred ccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCccc--ceeeee-eeee------ehhccccceeeeeeec
Confidence 456889999998888 599999999999999999999999742 233321 0000 0011111122222233
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC---CCCccccccCHhHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNI 244 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~---~~~a~~~~~~l~~l 244 (274)
+..|...++.+.+++ +++++++||||.+|+.|++.+|+++++-++... ...++|++.++.+|
T Consensus 151 ~~~K~~~v~~~~~~~--~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 151 SGGKGKVIKLLKEKF--HFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp TTHHHHHHHHHHHHH--CCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred cchHHHHHHHHHhcc--CccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 455667777776654 468999999999999999999987655433332 34688999999886
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.71 E-value=1.5e-17 Score=147.23 Aligned_cols=136 Identities=19% Similarity=0.204 Sum_probs=106.0
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccce--eEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
++|.|++.++|+.| |++++++||.+...++..++.+|+.++|+. +++.+++.. ..........
T Consensus 214 i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~------------~~~~~~~~~~ 281 (380)
T d1qyia_ 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE------------AENMYPQARP 281 (380)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHH------------HHHHSTTSCC
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhh------------hhhhcccccc
Confidence 45677999888877 599999999999999999999999999975 555554210 0000011112
Q ss_pred CCCCCHHHHHHHHHHh--------------CCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC---------CCCccc
Q 024023 180 LCKPSLEAIETAIRIA--------------NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---------VPPADH 236 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~--------------g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~---------~~~a~~ 236 (274)
.+||+|..+..++... +.++++|++|||+.||+.+|+++|+++|++.+|.. ..+||+
T Consensus 282 ~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ 361 (380)
T d1qyia_ 282 LGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADY 361 (380)
T ss_dssp CCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSE
T ss_pred ccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCE
Confidence 3599999999887543 56788999999999999999999999999988764 247999
Q ss_pred cccCHhHHHHHHHHHH
Q 024023 237 ALNSIHNIKEAIPEIW 252 (274)
Q Consensus 237 ~~~~l~~l~~~l~~~~ 252 (274)
+++++.+|..+|..+.
T Consensus 362 ii~~~~el~~il~~l~ 377 (380)
T d1qyia_ 362 VINHLGELRGVLDNLL 377 (380)
T ss_dssp EESSGGGHHHHHSCTT
T ss_pred EECCHHHHHHHHHHHH
Confidence 9999999998875543
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.70 E-value=1.4e-17 Score=139.71 Aligned_cols=70 Identities=14% Similarity=0.252 Sum_probs=63.7
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHHHHHHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l~~~l~ 249 (274)
.+||+|..+..+++++|++|++++||||++ +||.+|+++|+.+|+|.+|.. ...|||+++++.+|.++|+
T Consensus 183 ~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l~ 261 (261)
T d1vjra_ 183 AGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAVQ 261 (261)
T ss_dssp CSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHHC
T ss_pred cCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHhC
Confidence 469999999999999999999999999997 799999999999999988864 3468999999999998764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.66 E-value=5.8e-18 Score=141.71 Aligned_cols=66 Identities=20% Similarity=0.301 Sum_probs=58.6
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHH
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI 244 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l 244 (274)
..+||+|+++..+++++|++|++|+||||++ +||.+|+++|+++++|.+|.. ...||++++|+.|+
T Consensus 177 ~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 177 IIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp ECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred EeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 3469999999999999999999999999997 599999999999999987653 33579999999885
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.64 E-value=1.1e-16 Score=133.64 Aligned_cols=65 Identities=23% Similarity=0.374 Sum_probs=58.4
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI 244 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l 244 (274)
.+||+|.++..+++++|++|+++++|||+. +||.+|+++|+++++|.+|.. ...|||+++|+.|+
T Consensus 178 ~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~ 251 (253)
T d1yv9a1 178 IGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 251 (253)
T ss_dssp CSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred ecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHc
Confidence 369999999999999999999999999997 699999999999999977653 34589999999886
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.58 E-value=6.6e-15 Score=117.65 Aligned_cols=130 Identities=8% Similarity=0.019 Sum_probs=92.6
Q ss_pred CCCCChhHHHHHHhC--CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 104 KLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l--~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
.+...++....+..+ +.+.+++|++...........++...++...+....... .....
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------------------~~~~~ 127 (206)
T d1rkua_ 67 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR-------------------VVGYQ 127 (206)
T ss_dssp TCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSC-------------------EEEEE
T ss_pred hccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccc-------------------ccccc
Confidence 345566666665544 578889999999988888888887655444333221110 00012
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcccc-ccCHhHHHHHHHHHHh
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHA-LNSIHNIKEAIPEIWE 253 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~-~~~l~~l~~~l~~~~~ 253 (274)
.+++......++.++++++++++||||.||++|.+.+|++.++ +.+.. ...++++ ..+.+++.+.|.+...
T Consensus 128 ~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na~~~v~~~~~~~~~~~~~~d~~~~~~~~~~ 201 (206)
T d1rkua_ 128 LRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLKASS 201 (206)
T ss_dssp CCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHHHHCS
T ss_pred ccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE-CCCHHHHHhCCCceeecCHHHHHHHHHHHhh
Confidence 4445567888999999999999999999999999999999887 55443 4556775 6889999988776543
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.52 E-value=6.1e-15 Score=112.83 Aligned_cols=101 Identities=9% Similarity=-0.018 Sum_probs=70.0
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHH---HHHHHHHcC-----CC-CccceeEecccCCCCCCCCCCCCcccccc
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKH---AMEVLGRLG-----LE-DCFEGIICFETINPRLQPADNTDGIENNS 172 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~---~~~~l~~~g-----l~-~~fd~i~~~~~~~~~~~~~~~~~~~~~~~ 172 (274)
..++|++.++|+.+ |++++++||.+... +...++..+ +. ..++....... +.
T Consensus 35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~--------------- 98 (149)
T d1ltqa1 35 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQ-GD--------------- 98 (149)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCT-TC---------------
T ss_pred CccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccc-cc---------------
Confidence 46889999998887 69999999976321 222222211 11 22333333322 22
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCCCeE-EEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDPKKT-IFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~-i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
.+|+.......+.++..+..++ ++|||+..|+++|+++|++++.|.+|.
T Consensus 99 --------~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~Gd 148 (149)
T d1ltqa1 99 --------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASGD 148 (149)
T ss_dssp --------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCCC
T ss_pred --------cCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCCC
Confidence 2677788888888887776665 578999999999999999999998874
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.45 E-value=8.8e-14 Score=112.96 Aligned_cols=71 Identities=21% Similarity=0.208 Sum_probs=56.8
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCH--hHHHHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSI--HNIKEAIPEIW 252 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l--~~l~~~l~~~~ 252 (274)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|++++ +.++.. +..|++++.+- +.+.+++..+.
T Consensus 150 ~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~va-v~na~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 150 WINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVA-VAQAPKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp TCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEE-CTTSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred CcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEE-ECCCCHHHHHhCCEEECCCCcCHHHHHHHHHH
Confidence 5888999999999999999999999999999999999998655 544443 56788988663 34555555554
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.31 E-value=4.7e-13 Score=109.07 Aligned_cols=68 Identities=7% Similarity=0.082 Sum_probs=52.7
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCH--hHHHHHHHH
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSI--HNIKEAIPE 250 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l--~~l~~~l~~ 250 (274)
..|..+++.+++++|++++++++||||.||+.|++.+|..++ +.++.+ +..|++++++- +.+.++++.
T Consensus 150 ~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~va-v~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 150 EDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKAC-PANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEE-CTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred cchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEE-ECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 567899999999999999999999999999999999997654 544443 45678877444 445554443
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.28 E-value=5.1e-12 Score=105.29 Aligned_cols=70 Identities=17% Similarity=0.246 Sum_probs=54.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI 251 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~~~ 251 (274)
+-.|..+++.+++.++++++++++|||+.||++|.+.+|..++ +.++.. +..+++++.+-.+ +.++|+++
T Consensus 195 ~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~a-m~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~ 268 (271)
T d1rkqa_ 195 RVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVA-VDNAIPSVKEVANFVTKSNLEDGVAFAIEKY 268 (271)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTTSCHHHHHHCSEECCCTTTTHHHHHHHHH
T ss_pred CCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEE-eCCCCHHHHHhCCEEcCCCCcChHHHHHHHH
Confidence 3457889999999999999999999999999999999997765 444443 5567787776554 55555543
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.25 E-value=5.4e-12 Score=99.14 Aligned_cols=109 Identities=14% Similarity=0.199 Sum_probs=85.1
Q ss_pred HHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHH
Q 024023 112 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 191 (274)
Q Consensus 112 ~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 191 (274)
...|+..+..++++|+.....+....+.+++... +.. .+++...+..+
T Consensus 41 i~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~~----~~~----------------------------~~~K~~~l~~~ 88 (177)
T d1k1ea_ 41 IKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF----FLG----------------------------KLEKETACFDL 88 (177)
T ss_dssp HHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE----EES----------------------------CSCHHHHHHHH
T ss_pred HHHHhhhcEEEEEecCCchhHHHHHHhhhccccc----ccc----------------------------cccHHHHHHHH
Confidence 4566778899999999999999999888877432 222 26778899999
Q ss_pred HHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccC------HhHHHHHHHHHH
Q 024023 192 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNS------IHNIKEAIPEIW 252 (274)
Q Consensus 192 l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~------l~~l~~~l~~~~ 252 (274)
++++|+++++++||||+.||+++.+.+|+.++..+.... +..++|+..+ +.++.++|-+..
T Consensus 89 ~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~~~ 156 (177)
T d1k1ea_ 89 MKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQ 156 (177)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHT
T ss_pred HHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCchHHHHHHHHHHHC
Confidence 999999999999999999999999999977654433222 6778888877 677777665443
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.18 E-value=3.9e-11 Score=100.41 Aligned_cols=68 Identities=16% Similarity=0.154 Sum_probs=53.3
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHh--HHHHHHHH
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIH--NIKEAIPE 250 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~--~l~~~l~~ 250 (274)
-.|..+++.+++.+|++++++++|||+.||+.|++.+|.+++ +.++.+ +..|++++.+-+ .+.++|++
T Consensus 212 ~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~sva-m~na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 212 ASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVA-MGNAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEE-CTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred chhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEE-eCCCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 567999999999999999999999999999999999997654 555443 566788877644 24444443
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.16 E-value=4.4e-12 Score=105.83 Aligned_cols=69 Identities=12% Similarity=0.148 Sum_probs=55.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPE 250 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~~ 250 (274)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+ .+.++.. +..|++++.+-.+ +..+|++
T Consensus 188 ~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sv-a~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ 260 (267)
T d1nf2a_ 188 NVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRV-AMENAIEKVKEASDIVTLTNNDSGVSYVLER 260 (267)
T ss_dssp TCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEE-ECTTSCHHHHHHCSEECCCTTTTHHHHHHTT
T ss_pred CCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEE-EeCCCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 457799999999999999999999999999999999999764 4555443 6678888886665 4444443
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.12 E-value=1.3e-10 Score=96.58 Aligned_cols=75 Identities=13% Similarity=0.152 Sum_probs=61.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHHHHHhhcc
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEGEG 256 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~~~~~~~~ 256 (274)
+-.|..+++.+++++|++++++++||||.||++|.+.+|.+++ +.++.. +..|+++..+-++ +.+.|++++....
T Consensus 188 ~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~va-m~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~~~ 266 (269)
T d1rlma_ 188 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA-MGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTY 266 (269)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-CTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTCT
T ss_pred chHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEE-eCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhcCC
Confidence 3567899999999999999999999999999999999998766 544443 6778888887555 7788888776543
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.08 E-value=6e-10 Score=90.52 Aligned_cols=67 Identities=13% Similarity=0.091 Sum_probs=50.1
Q ss_pred cCCCCCHHHHHHHHHHhC-CCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHH
Q 024023 179 ILCKPSLEAIETAIRIAN-VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 248 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g-~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l 248 (274)
..+-.|..++..++++++ +.++++++|||+.||++|.+.+|.++++ .++.. ...-.+.++.|+.+.+
T Consensus 175 ~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~-~Na~~--~~~~~~~~i~~~~~~i 242 (243)
T d1wzca1 175 HGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV-GSLKH--KKAQNVSSIIDVLEVI 242 (243)
T ss_dssp ECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE-SSCCC--TTCEEESCHHHHHHHH
T ss_pred hhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEe-CCCCh--HHHhhhhHHHHHHHhh
Confidence 345667889999999995 8889999999999999999999977665 44332 2222466677766654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.08 E-value=1.4e-10 Score=96.04 Aligned_cols=60 Identities=20% Similarity=0.292 Sum_probs=49.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSI 241 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l 241 (274)
+..|..+++.+++++|++++++++||||.||+.|.+.+|..+ .+.++.+ +..|+++..+-
T Consensus 184 ~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~sv-av~na~~~lk~~A~~vt~~~ 245 (260)
T d2rbka1 184 GDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGV-AMGQAKEDVKAAADYVTAPI 245 (260)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTTSCHHHHHHSSEECCCG
T ss_pred CCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEE-EeCCCCHHHHHhCCEEeCCC
Confidence 467899999999999999999999999999999999999864 4555443 55677777764
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.06 E-value=5.8e-10 Score=92.75 Aligned_cols=72 Identities=13% Similarity=0.196 Sum_probs=57.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHh--H-HHHHHHHHHh
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIH--N-IKEAIPEIWE 253 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~--~-l~~~l~~~~~ 253 (274)
+..|..++..+++.++++++++++|||+.||+.|.+.+|.+++ +.++.. +..|++++.+-. + +..+|+++++
T Consensus 205 ~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va-~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~ 281 (283)
T d2b30a1 205 GHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA-VANATDSAKSHAKCVLPVSHREGAVAYLLKKVFD 281 (283)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE-CTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred cchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEE-eCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHc
Confidence 4677899999999999999999999999999999999997655 555544 556788876532 3 6677777764
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.00 E-value=5.3e-10 Score=94.14 Aligned_cols=120 Identities=12% Similarity=0.054 Sum_probs=74.5
Q ss_pred CChHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCC
Q 024023 87 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 163 (274)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~ 163 (274)
.+.+.+.+...+ ..+.+.||+.++++.| +.+++|+|++-...+..+++++|+...--.|++.. ..
T Consensus 120 l~~~~i~~~v~~----~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~-l~------- 187 (291)
T d2bdua1 120 IPKAKLKEIVAD----SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNF-MD------- 187 (291)
T ss_dssp CBGGGHHHHHHH----SCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEEC-EE-------
T ss_pred CCHHHHHHHHHh----cCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeE-EE-------
Confidence 344555555433 3567889999999888 59999999999999999999998763211344432 00
Q ss_pred CCCcccccccCcccccCCCCCHHHHHHHHHHh--CCCCCeEEEEcCChhcHHHHHHcC
Q 024023 164 NTDGIENNSFSSNQRILCKPSLEAIETAIRIA--NVDPKKTIFFDDSARNIASAKAAG 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~--g~~~~~~i~VGDs~~Di~~a~~~G 219 (274)
|+.-...+.+++.......+..........+ .-..++++++|||.+|+.||..+.
T Consensus 188 -f~~~~~~~~~~~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~ 244 (291)
T d2bdua1 188 -FDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA 244 (291)
T ss_dssp -ECTTSBEEEECSSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred -EeCCeeEeeccCCccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence 0000112222222222333344444444433 335688999999999999998654
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.97 E-value=8.8e-10 Score=87.27 Aligned_cols=92 Identities=22% Similarity=0.263 Sum_probs=67.5
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCC--------hHH----HHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccccc
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNAD--------QKH----AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 171 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~--------~~~----~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
++|++.+.|+.| ++.++|+||.+ .+. ...+++.++.. ++.+++......
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~i~~~~~~~~~-------------- 114 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLN-------------- 114 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSSS--------------
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--ccEEEecCcccc--------------
Confidence 357887777777 69999999963 222 33455555553 333444333333
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhC----CCCCeEEEEcCC-----------------hhcHHHHHHcCCeEE
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDS-----------------ARNIASAKAAGLHTV 223 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g----~~~~~~i~VGDs-----------------~~Di~~a~~~G~~~v 223 (274)
+||++.++..++++++ ++.++++||||. .+|+..|.++|+++.
T Consensus 115 ---------RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 115 ---------RKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp ---------STTSTHHHHHHHHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred ---------CCCccHHHHHHHHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 5999999999999985 788999999994 489999999999975
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.92 E-value=6.2e-09 Score=83.53 Aligned_cols=46 Identities=9% Similarity=-0.046 Sum_probs=37.2
Q ss_pred ccCCCCCHHHHHHHHH---HhCCCCCeEEEEcCChhcHHHHHHcCCeEE
Q 024023 178 RILCKPSLEAIETAIR---IANVDPKKTIFFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~---~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v 223 (274)
...+..|..+++.+++ ++|++++++++|||+.||++|.+.+|.+++
T Consensus 179 ~~~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~va 227 (232)
T d1xvia_ 179 LDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVI 227 (232)
T ss_dssp EETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEE
T ss_pred cCCCchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEE
Confidence 3345566777777665 569999999999999999999999997544
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.87 E-value=6.3e-09 Score=82.61 Aligned_cols=90 Identities=17% Similarity=0.213 Sum_probs=62.2
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCCh---HHHHHHH-HHcCCCC--ccceeEecccCCCCCCCCCCCCcccccccCc
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQ---KHAMEVL-GRLGLED--CFEGIICFETINPRLQPADNTDGIENNSFSS 175 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~---~~~~~~l-~~~gl~~--~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (274)
..+.||+.++++.+ |.+++++||.+. +.+..-| +.+|+.. ..+.++...+-.
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~------------------- 145 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPG------------------- 145 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTT-------------------
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCC-------------------
Confidence 46789999998888 699999999654 3334444 4578752 223344443211
Q ss_pred ccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 176 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 176 ~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
|.. -+..++++++ ++++||+.+|+.+|+++|++.+-+-
T Consensus 146 ------K~~---rr~~Ik~y~I----~l~~GD~l~Df~aA~eagi~~iRi~ 183 (209)
T d2b82a1 146 ------QNT---KSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRIL 183 (209)
T ss_dssp ------CCC---SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred ------chH---HHHHHHHcCe----EEEecCCHHHHhHHHHcCCCceEee
Confidence 221 2444466776 7899999999999999999999873
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.72 E-value=8.2e-09 Score=84.16 Aligned_cols=48 Identities=17% Similarity=0.174 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+..|..+++.+++++|++++++++|||+.||++|.+.+|..+ .+.+..
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~v-av~na~ 207 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGV-IVRNAQ 207 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEE-ECTTCC
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEE-EeCCCC
Confidence 356788999999999999999999999999999999999665 454444
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.49 E-value=9.5e-09 Score=82.82 Aligned_cols=43 Identities=14% Similarity=0.030 Sum_probs=31.6
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcC----ChhcHHHHHHcCCeEEEECC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGD----s~~Di~~a~~~G~~~v~v~~ 227 (274)
-.|..+++.++ ++.++++++||| |.||++|.+.+|...+++++
T Consensus 184 vsKg~al~~l~---~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~ 230 (243)
T d2amya1 184 WDKRYCLRHVE---NDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 230 (243)
T ss_dssp CSGGGGGGGTT---TSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred cCHHHHHHHHh---CCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence 44455666654 678999999999 67999999999966565544
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=2.6e-07 Score=72.73 Aligned_cols=114 Identities=14% Similarity=0.098 Sum_probs=69.8
Q ss_pred HHHHHHhccCCCCCCCCChhHHHHHHhCC----CcEEEEeCCChH---H---HHHHHHHcCCCCccce-eEecccCCCCC
Q 024023 91 EFHAFVHGKLPYEKLKPDPVLRNLLLSMP----QRKIIFTNADQK---H---AMEVLGRLGLEDCFEG-IICFETINPRL 159 (274)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~L~~l~----~~~~i~s~~~~~---~---~~~~l~~~gl~~~fd~-i~~~~~~~~~~ 159 (274)
.+.+.+.....+..++|+||+.++++.|. ..+.++|..... . ....|++.......+. +++.+
T Consensus 59 ~~~~~~~~~~ff~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~------ 132 (195)
T d1q92a_ 59 KAISIWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD------ 132 (195)
T ss_dssp HHHHHHTSTTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC------
T ss_pred HHHHHhhhhhHHhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc------
Confidence 33444444444678999999999988873 346677775422 2 2233444311111223 33322
Q ss_pred CCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCC----cc
Q 024023 160 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP----AD 235 (274)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~----a~ 235 (274)
|. .+.. -++|+|++..+..+.++|+..+....++++.. .-
T Consensus 133 ----------------------K~------------~~~~--d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~ 176 (195)
T d1q92a_ 133 ----------------------KT------------VVSA--DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPR 176 (195)
T ss_dssp ----------------------ST------------TSCC--SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTC
T ss_pred ----------------------cc------------eecC--eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCc
Confidence 31 1111 28999999998888999999999988887532 23
Q ss_pred ccccCHhHHHH
Q 024023 236 HALNSIHNIKE 246 (274)
Q Consensus 236 ~~~~~l~~l~~ 246 (274)
+.+.+..|+..
T Consensus 177 ~Rv~~W~e~~~ 187 (195)
T d1q92a_ 177 RRLHSWADDWK 187 (195)
T ss_dssp EEECCTTSCHH
T ss_pred eeeCCHHHHHH
Confidence 56888877553
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.40 E-value=1.2e-06 Score=64.78 Aligned_cols=106 Identities=16% Similarity=0.171 Sum_probs=71.0
Q ss_pred CChhHHHH---HHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCC
Q 024023 107 PDPVLRNL---LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183 (274)
Q Consensus 107 ~~~~~~~~---L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 183 (274)
+.|++.+. |+.+|.+++++|+.....+..+.+.+|+.. +++. -
T Consensus 22 lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~----v~~~------------------------------~ 67 (135)
T d2b8ea1 22 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL----VIAE------------------------------V 67 (135)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----EECS------------------------------C
T ss_pred CCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh----hccc------------------------------c
Confidence 33455544 555589999999999999999999999853 3321 1
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHH
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 248 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l 248 (274)
.|+-...+.+++... ..+.||||+.||..+.+.++++.++. ++.. +..+|.++ +++..|...+
T Consensus 68 ~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI 134 (135)
T d2b8ea1 68 LPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 134 (135)
T ss_dssp CHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHH
T ss_pred chhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHh
Confidence 233445555665544 57899999999999999999887654 3332 66788877 4566666554
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=98.14 E-value=1.3e-05 Score=70.28 Aligned_cols=121 Identities=12% Similarity=0.069 Sum_probs=74.6
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHH-c--------CCCCccceeEecccCC---CCCCCC-CCCC
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGR-L--------GLEDCFEGIICFETIN---PRLQPA-DNTD 166 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~-~--------gl~~~fd~i~~~~~~~---~~~~~~-~~~~ 166 (274)
..+..-|.+..+|+.+ |.++.++||++-..+...+.. + .+.++||.|++.-.-. ....|- ++..
T Consensus 182 kYv~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~ 261 (458)
T d2bdea1 182 KYVIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNP 261 (458)
T ss_dssp TSEECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECT
T ss_pred HhhcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeC
Confidence 3455568888888777 578999999999998877764 3 5668999988753100 000000 0000
Q ss_pred ---ccc-ccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHH-HcCCeEEEECC
Q 024023 167 ---GIE-NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIVGS 227 (274)
Q Consensus 167 ---~~~-~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~-~~G~~~v~v~~ 227 (274)
.+. ..+..++. ++.-. ....+.+-+|...++++||||+. .||...+ ..||.+++|-.
T Consensus 262 ~~g~l~~~~~~~~~~-vY~gG---n~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 324 (458)
T d2bdea1 262 ENGTMTNVHGPIVPG-VYQGG---NAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE 324 (458)
T ss_dssp TTCCEEECCSCCCSE-EEEEC---CHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECT
T ss_pred CCCccccCCccccCC-ccccC---CHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehH
Confidence 000 00011111 11112 34556666799989999999999 7977665 57999998843
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.13 E-value=3.2e-07 Score=73.35 Aligned_cols=44 Identities=9% Similarity=-0.044 Sum_probs=35.6
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCCh----hcHHHHHHcCCeEEEECC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSA----RNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~----~Di~~a~~~G~~~v~v~~ 227 (274)
+..|..+++.+++ .+++++++|||+. ||++|.+.+|...+.+.+
T Consensus 183 ~vsKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n 230 (244)
T d2fuea1 183 GWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 230 (244)
T ss_dssp TCSTTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred hccHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence 4667788888764 5889999999975 999999999976666654
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.98 E-value=2.1e-05 Score=60.15 Aligned_cols=135 Identities=13% Similarity=0.130 Sum_probs=81.3
Q ss_pred CChhHHHHHH---hCCCcEEEEeCCChHHHHHHHHHcCCCCcc----ceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 107 PDPVLRNLLL---SMPQRKIIFTNADQKHAMEVLGRLGLEDCF----EGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 107 ~~~~~~~~L~---~l~~~~~i~s~~~~~~~~~~l~~~gl~~~f----d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
|.|++.++++ ..|++++++|+.+...+..+.+.+|+...- +..+.+.++... ......-.......
T Consensus 21 ~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~~v 93 (168)
T d1wpga2 21 PRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDL-------PLAEQREACRRACC 93 (168)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHS-------CHHHHHHHHHHCCE
T ss_pred CchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchh-------hHHHHhhhhhhhhh
Confidence 4466655554 557999999999999999999999985322 222332221100 00000000001111
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccC--HhHHHHHHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAIP 249 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~--l~~l~~~l~ 249 (274)
...-.|+-...+.+.+.-....+.++||+.||..+.+.++++... ..+.. +..++.++.+ |..+..+|+
T Consensus 94 ~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~-~~gt~~a~~aAdivl~~~~l~~v~~~I~ 166 (168)
T d1wpga2 94 FARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM-GSGTAVAKTASEMVLADDNFSTIVAAVE 166 (168)
T ss_dssp EESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE-TTSCHHHHHTCSEEETTCCTHHHHHHHH
T ss_pred hhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe-ccccHHHHHhCCEEEccCCHHHHHHHHH
Confidence 223445555555555544457799999999999999999988765 44443 4457777655 777776654
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.67 E-value=2e-05 Score=62.06 Aligned_cols=67 Identities=13% Similarity=0.018 Sum_probs=51.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHh
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
+-.|..+++.++++ +++++|||+.||+.|.+.+|..+. +..|.....|.|++++.+++.++|+.+..
T Consensus 157 g~~Kg~al~~l~~~-----~~~i~~GDs~ND~~Mf~~~~~~~a-v~~g~~~~~A~~~~~~~~ev~~~l~~l~~ 223 (229)
T d1u02a_ 157 GVNKGSAIRSVRGE-----RPAIIAGDDATDEAAFEANDDALT-IKVGEGETHAKFHVADYIEMRKILKFIEM 223 (229)
T ss_dssp TCCHHHHHHHHHTT-----SCEEEEESSHHHHHHHHTTTTSEE-EEESSSCCCCSEEESSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcc-----ccceeecCCCChHHHHhccCCeEE-EEeCCCCccCeEEcCCHHHHHHHHHHHHH
Confidence 45667788777653 689999999999999999986543 33444567899999999998887776643
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.44 E-value=0.01 Score=46.96 Aligned_cols=145 Identities=12% Similarity=0.119 Sum_probs=83.1
Q ss_pred ChHHHHHHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecc-cCCCCCCCC--
Q 024023 88 DNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFE-TINPRLQPA-- 162 (274)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~-~~~~~~~~~-- 162 (274)
..+.+.++.. ..+.+.||+.++|+.++ .+.+|+|.+-.++++.....+|+. ++ +++.+ +....-.|.
T Consensus 68 t~edL~~fSE-----~~~~lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~~~gfp--~e-~~~T~~~lD~~~~p~ee 139 (308)
T d1y8aa1 68 KNRDVERIAE-----LSAKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMIGVR--GE-LHGTEVDFDSIAVPEGL 139 (308)
T ss_dssp CHHHHHHHHH-----HHCCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC--SE-EEEEBCCGGGCCCCHHH
T ss_pred CHHHHHHHhh-----hceeecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHhhcCCC--ce-eecccccccccCCChHH
Confidence 3445555542 34678999999999996 788999999999999999999985 33 33332 111000000
Q ss_pred ------------------------CCCCcccccccCcccccCC-CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHH
Q 024023 163 ------------------------DNTDGIENNSFSSNQRILC-KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKA 217 (274)
Q Consensus 163 ------------------------~~~~~~~~~~~~~~~~~~~-kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~ 217 (274)
.+|..++.+..+.+.-..| -.+..+++.+++..++++. ++||||.+|+++.+.
T Consensus 140 ~e~ll~i~~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~--~~VGDSITDve~Lr~ 217 (308)
T d1y8aa1 140 REELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFP--VVVGDSISDYKMFEA 217 (308)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSC--EEEECSGGGHHHHHH
T ss_pred HHHHHHHhhhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcc--eeccCccccHHHHHH
Confidence 0011111122222211111 2234456667777788774 999999999888776
Q ss_pred c----CCeEEEECCCCCCCCccccccCHh
Q 024023 218 A----GLHTVIVGSSVPVPPADHALNSIH 242 (274)
Q Consensus 218 ~----G~~~v~v~~~~~~~~a~~~~~~l~ 242 (274)
+ |+...+-++.+....|+..+-|..
T Consensus 218 ~r~~gGlaIsFNGN~Yal~eA~VaiiS~~ 246 (308)
T d1y8aa1 218 ARGLGGVAIAFNGNEYALKHADVVIISPT 246 (308)
T ss_dssp HHHTTCEEEEESCCHHHHTTCSEEEECSS
T ss_pred HhcCCCeeEEecCccccccccceEEeccc
Confidence 4 433333333333455555554443
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.32 E-value=0.00038 Score=49.96 Aligned_cols=46 Identities=15% Similarity=0.100 Sum_probs=35.1
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCC---------------hHHHHHHHHHcCCCCccceeEec
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICF 152 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~---------------~~~~~~~l~~~gl~~~fd~i~~~ 152 (274)
..|.+++.+.++.| |.+++|.|+.. .+.+...|+..|+. +|.++.+
T Consensus 23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~--Yd~Li~g 86 (124)
T d1xpja_ 23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP--YDEILVG 86 (124)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC--CSEEEEC
T ss_pred cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC--ceEEEEC
Confidence 36788888888877 79999999874 24567788888985 6777664
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=95.50 E-value=0.012 Score=41.70 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=28.9
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHH---HHHHHHcCCCCcccee
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHA---MEVLGRLGLEDCFEGI 149 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~---~~~l~~~gl~~~fd~i 149 (274)
.|.|++.++|+.| |..+++.|+.+.... ...|++.|+. |+.+
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~--yd~i 68 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE--FYAA 68 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC--CSEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC--ceeh
Confidence 4677888888877 688999999876543 3455555554 4544
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=94.41 E-value=0.0075 Score=46.45 Aligned_cols=27 Identities=22% Similarity=0.272 Sum_probs=18.8
Q ss_pred EEEEecCCCccC-----CchhHHHHHHHHHHH
Q 024023 23 CLLFDLDDTLYP-----LSTGFNLACRRNIEE 49 (274)
Q Consensus 23 ~viFDlDGTL~d-----~~~~~~~~~~~~~~~ 49 (274)
+|+||+||||++ +...+.....+++++
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~ 33 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISD 33 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHH
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHH
Confidence 689999999996 223455666665554
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.97 E-value=0.0045 Score=47.18 Aligned_cols=92 Identities=15% Similarity=0.134 Sum_probs=67.3
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
+...||+.++|+.+. +.++|.|.+....+..+++.+.-...|...+..++.... +
T Consensus 54 v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~~-----------------------~ 110 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFH-----------------------R 110 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEEE-----------------------T
T ss_pred EecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeeec-----------------------C
Confidence 456799999999994 899999999999999999999877777777666543221 0
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeE
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 222 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~ 222 (274)
+ .+..-++.+|.+.+++++|+|++.-...-...|+..
T Consensus 111 ~---~~~KdL~~l~~~l~~vvivDd~~~~~~~~~~N~I~I 147 (181)
T d1ta0a_ 111 G---NYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp T---EEECCGGGSCSCGGGEEEECSCGGGGTTCGGGBCCC
T ss_pred C---cccccHhhcCCCHHHeEEEcCChhhhhcCccCeeEe
Confidence 0 011234566888899999999998765544455543
|