Citrus Sinensis ID: 024042
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 273 | 2.2.26 [Sep-21-2011] | |||||||
| P96851 | 291 | 4,5:9,10-diseco-3-hydroxy | yes | no | 0.860 | 0.807 | 0.266 | 1e-12 | |
| P19076 | 283 | 2-hydroxymuconate semiald | N/A | no | 0.772 | 0.745 | 0.248 | 4e-10 | |
| P0A573 | 341 | Uncharacterized protein M | no | no | 0.769 | 0.615 | 0.252 | 5e-10 | |
| P0A572 | 341 | Uncharacterized protein R | no | no | 0.769 | 0.615 | 0.252 | 5e-10 | |
| B2JQW2 | 288 | 2-hydroxy-6-oxononadiened | no | no | 0.783 | 0.743 | 0.272 | 4e-09 | |
| P23133 | 276 | 2-hydroxy-6-oxo-2,4-hepta | yes | no | 0.805 | 0.797 | 0.246 | 8e-09 | |
| A7MST3 | 254 | Pimelyl-[acyl-carrier pro | yes | no | 0.761 | 0.818 | 0.257 | 8e-09 | |
| Q49KF8 | 285 | 2-hydroxy-6-oxononadiened | yes | no | 0.761 | 0.729 | 0.258 | 1e-08 | |
| P27747 | 374 | Dihydrolipoyllysine-resid | yes | no | 0.772 | 0.564 | 0.271 | 1e-08 | |
| A4ST17 | 254 | Pimelyl-[acyl-carrier pro | yes | no | 0.758 | 0.814 | 0.255 | 6e-08 |
| >sp|P96851|HSAD_MYCTU 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase OS=Mycobacterium tuberculosis GN=hsaD PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 46/281 (16%)
Query: 30 IDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI-W-QWRKQVQFFAPHFNVYVP 87
+D+D LH+ + +D ++VL+HG GP A W + + + A HF+V
Sbjct: 18 VDVDGPLKLHYHEAGVGNDQ------TVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAV 71
Query: 88 DLIFFGHSTTRSIQ-RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERV 146
D +GHS R+ + + A +L L +++G+ R +VG S GG A A +P R
Sbjct: 72 DQPGYGHSDKRAEHGQFNRYAAMALKGLFDQLGLGRVPLVGNSLGGGTAVRFALDYPARA 131
Query: 147 EKVVIASSG---VNMKRGDNEALVKR----------ANLERI-------DHLMLPESASQ 186
++V+ G +N+ D VKR NLE +L+ PE Q
Sbjct: 132 GRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQ 191
Query: 187 LRTL--TGLAVSKNLDIVPDFFFNDFV------------HDVLIVWGDQDQIFPLKMA-T 231
L T +++ + F DF VL++WG +D++ PL A
Sbjct: 192 RFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALV 251
Query: 232 ELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272
LK + +A+L + H Q+E FN + FL G
Sbjct: 252 ALKTI--PRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGGG 290
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Catalyzes the hydrolysis of a carbon-carbon bond in 4,5: 9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate (4,9-DSHA) to yield 9,17-dioxo-1,2,3,4,10,19-hexanorandrostan-5-oate (DOHNAA) and 2-hydroxy-hexa-2,4-dienoate (HHD). Is also able to catalyze the hydrolysis of 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid (HOPDA) and the synthetic analog 8-(2-chlorophenyl)-2-hydroxy-5-methyl-6-oxoocta-2,4-dienoic acid (HOPODA). Mycobacterium tuberculosis (taxid: 1773) EC: 3EC: .EC: 7EC: .EC: 1EC: .EC: 8 |
| >sp|P19076|DMPD_PSEUF 2-hydroxymuconate semialdehyde hydrolase OS=Pseudomonas sp. (strain CF600) GN=dmpD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 111/245 (45%), Gaps = 34/245 (13%)
Query: 57 LVLIHGFGP--EAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQR--TELFQAASLG 112
L++IHG GP A WR + A V PD++ FG+S + + +++ ++G
Sbjct: 32 LMMIHGSGPGVTAWANWRLVMPELAKSRRVIAPDMLGFGYSERPADAQYNRDVWVDHAVG 91
Query: 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS---------GVNMKRGDN 163
+L+ + +E+ +VG S+GG +A +A PERV ++V+ S G++ G N
Sbjct: 92 -VLDALEIEQADLVGNSFGGGIALALAIRHPERVRRLVLMGSAGVSFPITEGLDAVWGYN 150
Query: 164 EALVKRANLERI---DHLMLPESASQLRTLTGLAVSKNLDIVPDF--------------- 205
+ + L I D ++ + ++LR + + F
Sbjct: 151 PSFAEMRRLLDIFAFDRNLVNDELAELRYQASIRPGFHESFAAMFPAPRQRWVDGLASAE 210
Query: 206 -FFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSI 264
H+ L++ G +DQI PL+ + L + + +A+L + H QIE+ F S+
Sbjct: 211 AAIRALPHETLVIHGREDQIIPLQTSLTLADWI-ARAQLHVFGQCGHWTQIEHAARFASL 269
Query: 265 VKNFL 269
V +FL
Sbjct: 270 VGDFL 274
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Catalyzes the conversion of 2-hydroxymuconate semialdehyde to 2-hydroxypent-2,4-dienoate. Pseudomonas sp. (strain CF600) (taxid: 79676) EC: 3 EC: . EC: 7 EC: . EC: 1 EC: . EC: 9 |
| >sp|P0A573|Y2734_MYCBO Uncharacterized protein Mb2734 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2734 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 109/261 (41%), Gaps = 51/261 (19%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKL 114
P+++LIHG G + W A F V PDL+ G S + A + L
Sbjct: 38 PAILLIHGIGDNST-TWNGVHAKLAQRFTVIAPDLLGHGQSDKPRADYSVAAYANGMRDL 96
Query: 115 LEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL-- 172
L + +ER ++VG S GG VA A +P+ V+++++ S+G K D + + A+L
Sbjct: 97 LSVLDIERVTIVGHSLGGGVAMQFAYQFPQLVDRLILVSAGGVTK--DVNIVFRLASLPM 154
Query: 173 --ERIDHLMLP------------------------ESASQLRTLTGL-------AVSKNL 199
E + L LP + + LR L L A + L
Sbjct: 155 GSEAMALLRLPLVLPAVQIAGRIVGKAIGTTSLGHDLPNVLRILDDLPEPTASAAFGRTL 214
Query: 200 DIVPDF-----------FFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIEN 248
V D+ + + + V I+WG +D + P++ A + ++LEI E
Sbjct: 215 RAVVDWRGQMVTMLDRCYLTEAI-PVQIIWGTKDVVLPVRHA-HMAHAAMPGSQLEIFEG 272
Query: 249 TSHVPQIENPGLFNSIVKNFL 269
+ H P ++P F IV+ F+
Sbjct: 273 SGHFPFHDDPARFIDIVERFM 293
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Mycobacterium bovis (taxid: 1765) |
| >sp|P0A572|Y2715_MYCTU Uncharacterized protein Rv2715/MT2788 OS=Mycobacterium tuberculosis GN=Rv2715 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 109/261 (41%), Gaps = 51/261 (19%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKL 114
P+++LIHG G + W A F V PDL+ G S + A + L
Sbjct: 38 PAILLIHGIGDNST-TWNGVHAKLAQRFTVIAPDLLGHGQSDKPRADYSVAAYANGMRDL 96
Query: 115 LEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL-- 172
L + +ER ++VG S GG VA A +P+ V+++++ S+G K D + + A+L
Sbjct: 97 LSVLDIERVTIVGHSLGGGVAMQFAYQFPQLVDRLILVSAGGVTK--DVNIVFRLASLPM 154
Query: 173 --ERIDHLMLP------------------------ESASQLRTLTGL-------AVSKNL 199
E + L LP + + LR L L A + L
Sbjct: 155 GSEAMALLRLPLVLPAVQIAGRIVGKAIGTTSLGHDLPNVLRILDDLPEPTASAAFGRTL 214
Query: 200 DIVPDF-----------FFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIEN 248
V D+ + + + V I+WG +D + P++ A + ++LEI E
Sbjct: 215 RAVVDWRGQMVTMLDRCYLTEAI-PVQIIWGTKDVVLPVRHA-HMAHAAMPGSQLEIFEG 272
Query: 249 TSHVPQIENPGLFNSIVKNFL 269
+ H P ++P F IV+ F+
Sbjct: 273 SGHFPFHDDPARFIDIVERFM 293
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Mycobacterium tuberculosis (taxid: 1773) |
| >sp|B2JQW2|MHPC_BURP8 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=mhpC PE=3 SV=1 | Back alignment and function description |
|---|
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 106/253 (41%), Gaps = 39/253 (15%)
Query: 54 KPSLVLIHGFGPEAI-WQ--WRKQVQFFAPHFNVYVPDLIFFGHSTT--RSIQRTELFQA 108
K +LVL+HG GP A W +R F + V + D +G S + + R++L A
Sbjct: 36 KETLVLLHGSGPGASGWANFYRNVDAFANAGYRVILVDCPGWGKSDSIVCTGSRSDL-NA 94
Query: 109 ASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVI--------------ASS 154
L +L+ +G+ER +VG S GG A A +PERV K+V+ +
Sbjct: 95 RVLKGVLDTLGIERAHLVGNSMGGHSAVAFALSYPERVGKLVLMGGGTGGPSQFVPMPTE 154
Query: 155 GVNMKRG-----DNEALVKRANLERIDHLMLPESASQLRTLTGLA-----------VSKN 198
G+ + +G E L K N+ D + E Q R LA ++ N
Sbjct: 155 GIKLLQGLYRDPTLENLKKMLNVFVYDASTMTEELMQTRLDNMLARRDHLENFVKSLTAN 214
Query: 199 LDIVPDFF--FNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE 256
PD+ N+ L++WG D+ PL + L L A + H Q E
Sbjct: 215 PKQFPDYGHRLNEIKAPALVIWGRDDRFVPLDVGLRLVWGL-PNAEFHVFGRCGHWAQWE 273
Query: 257 NPGLFNSIVKNFL 269
+ FN ++ +FL
Sbjct: 274 HAERFNQMLLDFL 286
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Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6-oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid. Burkholderia phymatum (strain DSM 17167 / STM815) (taxid: 391038) EC: 3 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|P23133|TODF_PSEP1 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=todF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 32/252 (12%)
Query: 49 HKTLKKPSLVLIHGFGP--EAIWQWRKQVQFFAPHFNVYVPDLIFFGHST-TRSIQRTEL 105
H +VL+HG GP A WR + + H V PD++ FG + I
Sbjct: 22 HDVGAGNPVVLVHGSGPGVTAWANWRTVMPELSRHRRVIAPDMVGFGFTQRPHGIHYGVE 81
Query: 106 FQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS-GVNMKRGDNE 164
A L +L+ + ++R +VG S+GG ++ A +P RV ++V+ + GV+ + D
Sbjct: 82 SWVAHLAGILDALELDRVDLVGNSFGGALSLAFAIRFPHRVRRLVLMGAVGVSFELTDGL 141
Query: 165 ALV-----KRANLERI------DHLMLPESASQLR----TLTGLAVS----------KNL 199
V N+ ++ D ++ + ++LR T G + + +
Sbjct: 142 DAVWGYEPSVPNMRKVMDYFAYDRSLVSDELAELRYKASTRPGFQEAFASMFPAPRQRWV 201
Query: 200 DIVP--DFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIEN 257
D + D D H+ LI+ G D++ PL+ + L +L+ + ++L + H QIE
Sbjct: 202 DALASSDQDIRDIRHETLILHGRDDRVIPLETSLRLNQLI-EPSQLHVFGRCGHWVQIEQ 260
Query: 258 PGLFNSIVKNFL 269
F +V +FL
Sbjct: 261 NRGFIRLVNDFL 272
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Pseudomonas putida (strain F1 / ATCC 700007) (taxid: 351746) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|A7MST3|BIOH_VIBHB Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=bioH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 41/249 (16%)
Query: 53 KKPSLVLIHGFGPE-AIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASL 111
+ P LVL+HG+G A+WQ + V+ P+F V+V DL +GHS + A +
Sbjct: 12 QGPDLVLLHGWGMNGAVWQ--QTVESLQPYFRVHVVDLPGYGHSAESHAE-----DLAKI 64
Query: 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS-----------GV--NM 158
L+ + E+ +G S GG VA H+A P+RV K++ +S G+ N+
Sbjct: 65 ADLVLQDAPEKAVWLGWSLGGLVATHIALNAPQRVSKLITVASSPKFAAERPWRGIQPNV 124
Query: 159 KRGDNEALVK--RANLERIDHLML---PESASQLRTLTGLAVSK----------NLDIVP 203
+ L++ +ER L P + ++ L +S+ L+I+
Sbjct: 125 LTAFTDQLLEDFSVTIERFMALQAMGSPSARKDVKQLKQAVLSRPQPNPDSLLVGLNILA 184
Query: 204 DFFFNDFVHD----VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPG 259
D D + +L ++G D + P+K+A++L E L + + +SH P +
Sbjct: 185 DVDLRDALTSLSMPMLRLYGRLDGLVPIKVASDLNEQLPSTQQF-VFNQSSHAPFMTEHE 243
Query: 260 LFNSIVKNF 268
F V+ F
Sbjct: 244 AFCLQVREF 252
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The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. Vibrio harveyi (strain ATCC BAA-1116 / BB120) (taxid: 338187) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 5 |
| >sp|Q49KF8|MHPC1_PSEPU 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase 1 OS=Pseudomonas putida GN=mhpC1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 109/259 (42%), Gaps = 51/259 (19%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFF--GHSTTRSI----QRTELFQ 107
K ++V++HG GP A W + P N ++ G S + SI R++L
Sbjct: 33 KETVVMLHGSGPGAS-GWANFNRNIEPLVNAGFRVILMDCPGWSKSDSIVSTGSRSDL-N 90
Query: 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVI--------------AS 153
A L L++K+ +++ ++G S GG A + WPERV K+V+ S
Sbjct: 91 ARVLKGLVDKLDLDKIHILGNSMGGHTAVAFSLTWPERVGKLVLMGGGTGGVSPFVPMPS 150
Query: 154 SGVNMKRGDNEALVKRANLERIDHLM---------LPESASQLRTLTGLA---------- 194
G+ + G L + +E + +M L E Q R LA
Sbjct: 151 EGIKLLNG----LYREPTIENLKKMMSIFVYDTSDLTEELFQTRLDNMLARKDHLENFTA 206
Query: 195 -VSKNLDIVPDFF--FNDFVHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTS 250
++ NL PDF + + L++WG D+ PL T L+ + G ++L +
Sbjct: 207 SLAANLKQFPDFGHRLGEINAETLVIWGRNDRFVPLD--TGLRLVAGISNSQLHVFNKCG 264
Query: 251 HVPQIENPGLFNSIVKNFL 269
H Q E+ FN +V +FL
Sbjct: 265 HWAQWEHADTFNRMVLDFL 283
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Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6-oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid. Pseudomonas putida (taxid: 303) EC: 3 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|P27747|ACOC_CUPNH Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoC PE=1 SV=3 | Back alignment and function description |
|---|
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 100/243 (41%), Gaps = 32/243 (13%)
Query: 56 SLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLL 115
+++ IHGFG + + W + A + V DL G S+ R T A + + +
Sbjct: 137 TVLFIHGFGGD-LDNWLFNLDPLADAYTVVALDLPGHGQSSPRLAGTTLAQMAGFVARFM 195
Query: 116 EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS---GVNMKRGDNEALV---KR 169
++ G+E VVG S GG VA +A P+RV V + S G + G E V R
Sbjct: 196 DETGIEAAHVVGHSMGGGVAAQLAVDAPQRVLSVALVSPVGFGDAVNSGYTEGFVSAQSR 255
Query: 170 ANLERIDHLMLPESASQLRT-LTGLAVSKNLDIV--------------------PDFFFN 208
L+ + L+ ++ R L L K LD V P
Sbjct: 256 RELKPVVELLFADAGLVSRQMLDDLLRYKRLDGVTEALTALGQGLFGGGRQSEQPGQRLA 315
Query: 209 DFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNF 268
+ VL+VWG QDQI P A A +++ + H+ Q+E FN+++K
Sbjct: 316 NSGKRVLVVWGGQDQIIPAAHAEAAP----PGATVKVFADAGHMSQMEKANDFNALLKKH 371
Query: 269 LRG 271
L G
Sbjct: 372 LGG 374
|
Dihydrolipoamide acetyltransferase involved in acetoin catabolism. Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 2 |
| >sp|A4ST17|BIOH_AERS4 Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Aeromonas salmonicida (strain A449) GN=bioH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 47/254 (18%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLG 112
+ P LVL+HG+G W Q A H+ +++ DL FG+S R SL
Sbjct: 10 QGPDLVLLHGWGMNGA-VWHGIAQQLAAHYRLHLVDLPGFGNSPLREGSDY------SLP 62
Query: 113 KLLEKIGV---ERFSVVGTSYGGFVAYHMARMWPERVEKVV-IASSGVNMKR-------- 160
L E+I + ++ ++G S GG VA +A PER+ ++ +ASS M R
Sbjct: 63 WLAEQIAIVLPQKCHLLGWSLGGLVASQLALTQPERLHSLITVASSPCFMARDEWPGIAP 122
Query: 161 ----GDNEALV--------------------KRANLERIDHLMLPESASQLRTL-TGLAV 195
G N+ L R ++ ++ H + A Q L GL +
Sbjct: 123 KVLTGFNQMLAGDFRQTIERFLAIQAMGSEHARDDIRQLRHWLAERPAPQFAALEAGLGL 182
Query: 196 SKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255
++D+ + L V+G D + P K + L + + ++E SH P I
Sbjct: 183 LADVDLRDELL--QLSLPWLRVYGRLDSLVP-KASIALLDERYPASHSVVLEKASHAPFI 239
Query: 256 ENPGLFNSIVKNFL 269
+P F IV+ F+
Sbjct: 240 SHPQQFVEIVRYFV 253
|
The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. Aeromonas salmonicida (strain A449) (taxid: 382245) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 273 | ||||||
| 449452939 | 304 | PREDICTED: epoxide hydrolase 4-like [Cuc | 0.992 | 0.891 | 0.603 | 1e-101 | |
| 224088703 | 302 | predicted protein [Populus trichocarpa] | 0.981 | 0.887 | 0.580 | 4e-99 | |
| 225429706 | 298 | PREDICTED: 2-hydroxy-6-oxononadienedioat | 0.967 | 0.885 | 0.578 | 6e-95 | |
| 356507099 | 302 | PREDICTED: monoacylglycerol lipase ABHD6 | 0.974 | 0.880 | 0.577 | 1e-93 | |
| 356514758 | 302 | PREDICTED: dihydrolipoyllysine-residue a | 0.974 | 0.880 | 0.570 | 2e-92 | |
| 357465889 | 304 | Epoxide hydrolase [Medicago truncatula] | 0.974 | 0.875 | 0.570 | 1e-91 | |
| 297802672 | 308 | hypothetical protein ARALYDRAFT_491367 [ | 0.985 | 0.873 | 0.542 | 1e-89 | |
| 297812307 | 300 | predicted protein [Arabidopsis lyrata su | 0.985 | 0.896 | 0.539 | 2e-88 | |
| 29294062 | 300 | hydrolase, alpha/beta fold family [Arabi | 0.985 | 0.896 | 0.535 | 1e-87 | |
| 356518177 | 305 | PREDICTED: dihydrolipoyllysine-residue a | 0.985 | 0.881 | 0.543 | 3e-87 |
| >gi|449452939|ref|XP_004144216.1| PREDICTED: epoxide hydrolase 4-like [Cucumis sativus] gi|449489278|ref|XP_004158266.1| PREDICTED: epoxide hydrolase 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/305 (60%), Positives = 227/305 (74%), Gaps = 34/305 (11%)
Query: 1 MAPSFLSLVSLYRIYLRRCFASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLI 60
M PSFLSLVSLY YLRRCF++AGLS Q I IDDETT+ FWGPK HK+ KPSL+L+
Sbjct: 1 MWPSFLSLVSLYGRYLRRCFSAAGLSQQVIHIDDETTIAFWGPK-PKPHKSTAKPSLLLL 59
Query: 61 HGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV 120
HGFGP AIWQWR+QVQF F+VYVPDL+FFG S T+S +RTE+FQA S+GKL+E IGV
Sbjct: 60 HGFGPSAIWQWRQQVQFLTHDFDVYVPDLVFFGGSNTKSAERTEVFQAMSVGKLIEMIGV 119
Query: 121 ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML 180
+++SV+GTSYGGFVAYHMAR+WPER+EKV+IASSG+NM+R DNEA++KRAN+E+ID +L
Sbjct: 120 KKYSVLGTSYGGFVAYHMARIWPERIEKVIIASSGLNMRRKDNEAMLKRANVEKIDEFLL 179
Query: 181 PESASQLRTLTGLAVSKNLD-IVPDFFFNDFVH--------------------------- 212
P +A QLRTL LAV K +PDFFFNDF+H
Sbjct: 180 PVTAEQLRTLMKLAVFKGGGRQMPDFFFNDFIHKLYMENREQKIELLKSLTLGREDSINL 239
Query: 213 -----DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKN 267
+VLI+WGD DQ+FPL+MA ELK ++G+K RLE+++ TSHVPQIE P FN +VK+
Sbjct: 240 SPLSQEVLIIWGDHDQLFPLEMAKELKGMIGEKTRLEVLKETSHVPQIEAPVQFNQLVKS 299
Query: 268 FLRGS 272
FL GS
Sbjct: 300 FLCGS 304
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224088703|ref|XP_002308516.1| predicted protein [Populus trichocarpa] gi|118489841|gb|ABK96720.1| unknown [Populus trichocarpa x Populus deltoides] gi|222854492|gb|EEE92039.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 225/305 (73%), Gaps = 37/305 (12%)
Query: 1 MAPSFLSLVSLYRIYLRRCFASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLI 60
MAPSFLSL SLY YLR CF S+GLS ++I++ DETT+H+W P KP+LV I
Sbjct: 1 MAPSFLSLASLYSFYLRHCFTSSGLSQKSINVGDETTIHYWAPT----QLGQPKPNLVFI 56
Query: 61 HGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV 120
HGFGP ++WQWR+QVQFFAP FN+YVPDLIFFG+STT+S +R+E+FQA S+ KLLE +GV
Sbjct: 57 HGFGPVSLWQWRQQVQFFAPDFNLYVPDLIFFGNSTTKSSERSEIFQAESVAKLLETLGV 116
Query: 121 ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML 180
E++S+VGTSYGGFV+YH+ARM+PERVEKVV+ASSGVNMK+ +NE LVK+A LE+ID LML
Sbjct: 117 EKYSLVGTSYGGFVSYHIARMFPERVEKVVVASSGVNMKKKNNEELVKKAKLEKIDDLML 176
Query: 181 PESASQLRTLTGLAVSK-NLDIVPDFFFNDFVH--------------------------- 212
P+ S LR L G+AVSK +L ++PDFF ND ++
Sbjct: 177 PQKPSDLRALLGVAVSKRSLLMIPDFFLNDLINKLFAENRNKKMELLSGLTIGQDDAVNI 236
Query: 213 -----DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKN 267
DVL+VWGD+DQIFPL+MA +L+ L+GK +LEI+++TSHVPQIEN FN I+KN
Sbjct: 237 SPLQQDVLLVWGDKDQIFPLEMAKDLQGLIGKNVKLEIVKDTSHVPQIENAAEFNKIIKN 296
Query: 268 FLRGS 272
FL S
Sbjct: 297 FLSAS 301
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429706|ref|XP_002281808.1| PREDICTED: 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase isoform 1 [Vitis vinifera] gi|296081728|emb|CBI20733.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 174/301 (57%), Positives = 214/301 (71%), Gaps = 37/301 (12%)
Query: 1 MAPSFLSLVSLYRIYLRRCFASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLI 60
M S LS SLY YLRRCF ++GLSSQTIDID +T++HFWGP + KP L+LI
Sbjct: 1 MVASCLSPTSLYGGYLRRCFTASGLSSQTIDIDHQTSIHFWGP-----NTASHKPVLLLI 55
Query: 61 HGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV 120
HGFGP +WQWR+QVQ+F F+VYVPDLIFFG STT S RTE+FQA S+GKLLEK+G+
Sbjct: 56 HGFGPVCLWQWRRQVQYFCADFDVYVPDLIFFGDSTTTSSDRTEVFQAVSIGKLLEKVGI 115
Query: 121 ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML 180
ER++V+GTSYGGFVAYHMA MWPERVEKVVIASS VN+ R DNE L++RA L+ I+ LML
Sbjct: 116 ERYAVMGTSYGGFVAYHMAYMWPERVEKVVIASSAVNLIRRDNEELLQRAKLKEIEDLML 175
Query: 181 PESASQLRTLTGLAVSKNLDIVPDFFFNDFV----------------------------- 211
P +A QLRTLT LAV K L +P+F +ND +
Sbjct: 176 PRTAEQLRTLTSLAVFKRLPTIPNFLWNDIIDKLYSDNREEKKGLLKGLTLGREDTPNIS 235
Query: 212 ---HDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNF 268
+VLI+WGD DQIFPL A ELKE+LG+KA+LE+++ T+H+PQ+E P FN+IVKNF
Sbjct: 236 PLQQEVLIIWGDHDQIFPLGKAIELKEVLGEKAKLEVMKKTAHMPQVEFPERFNAIVKNF 295
Query: 269 L 269
L
Sbjct: 296 L 296
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356507099|ref|XP_003522308.1| PREDICTED: monoacylglycerol lipase ABHD6-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/303 (57%), Positives = 218/303 (71%), Gaps = 37/303 (12%)
Query: 1 MAPSFLSLVSLYRIYLRRCFASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLI 60
M PSFLSLVS+Y +YLRRCF AGLSSQT+ +DDE+TLHFW P + T +KPSLVLI
Sbjct: 1 MLPSFLSLVSVYSLYLRRCFTGAGLSSQTLRVDDESTLHFWAP----TNPTAQKPSLVLI 56
Query: 61 HGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV 120
HGFGPE+IWQWRKQVQF APHFNVYVPDLIFFG S+T+S +R+E FQAAS+GKLL+K+ V
Sbjct: 57 HGFGPESIWQWRKQVQFLAPHFNVYVPDLIFFGGSSTKSSERSETFQAASVGKLLDKLEV 116
Query: 121 ERFSVVGTSYGGFVAYHMARMWPE-RVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM 179
E+F VVGTSYGG VAY++A+M E RV+KVVIASSGVNM + N ALV+RA LE+I+ LM
Sbjct: 117 EKFHVVGTSYGGMVAYNLAKMLGEDRVQKVVIASSGVNMIKSSNVALVQRAQLEKIEDLM 176
Query: 180 LPESASQLRTLTGLAVSKNLDIVPDFFFNDFV---------------------------- 211
LP + LR L ++ K ++PDF DF+
Sbjct: 177 LPPTPQHLRILMKFSIHKPPQLLPDFLLRDFLAKLYGENRKEKMELLKGLTVGRDDTSRI 236
Query: 212 ----HDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKN 267
+VLIVWG++D+IFPLK+A ELKE++ KKARLE+I+ SHVPQ+E P FN+I+ N
Sbjct: 237 SPLQQEVLIVWGEEDRIFPLKLAHELKEIISKKARLELIKEASHVPQMEKPREFNNILLN 296
Query: 268 FLR 270
FL+
Sbjct: 297 FLQ 299
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356514758|ref|XP_003526070.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/303 (57%), Positives = 217/303 (71%), Gaps = 37/303 (12%)
Query: 1 MAPSFLSLVSLYRIYLRRCFASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLI 60
M PSFLS VS+Y +YLRRCF +GLSSQT+ +DDETTLHFW P + T +KPS+VLI
Sbjct: 1 MLPSFLSPVSVYSLYLRRCFTGSGLSSQTLSVDDETTLHFWAPT----NPTAQKPSVVLI 56
Query: 61 HGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV 120
HGFGPE+IWQWRKQVQF AP FNVYV DLIFFG S+T+S +R+E FQAASLGKLL+K+ V
Sbjct: 57 HGFGPESIWQWRKQVQFLAPDFNVYVLDLIFFGGSSTKSSERSETFQAASLGKLLDKLEV 116
Query: 121 ERFSVVGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM 179
E+F VVGTSYGG VAY++A+M ERV+KVVIASSGVNM + N ALV+RA LE+I+ LM
Sbjct: 117 EKFHVVGTSYGGLVAYNLAKMLGEERVQKVVIASSGVNMMKSSNVALVQRAQLEKIEDLM 176
Query: 180 LPESASQLRTLTGLAVSKNLDIVPDFFFNDFV---------------------------- 211
LP + LR L L++ K ++PDF DF+
Sbjct: 177 LPPTPQHLRILMSLSIHKPPQLLPDFLLRDFLDKLYGENKKEKMELLKGLTIGRDDTSRI 236
Query: 212 ----HDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKN 267
+VLIVWG++D+IFP+K+A ELKE++ KKARLE+I+ SHVPQ+E PG FN+I+ N
Sbjct: 237 SPLQQEVLIVWGEEDRIFPVKLAHELKEIISKKARLELIKEASHVPQMEKPGEFNNILLN 296
Query: 268 FLR 270
FL+
Sbjct: 297 FLQ 299
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357465889|ref|XP_003603229.1| Epoxide hydrolase [Medicago truncatula] gi|355492277|gb|AES73480.1| Epoxide hydrolase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/305 (57%), Positives = 215/305 (70%), Gaps = 39/305 (12%)
Query: 1 MAPSFLSLVSLYRIYLRRCFASAGLSSQTIDID--DETTLHFWGPKLEDDHKTLKKPSLV 58
M PSFLS LY YLRRCF AGL SQ IDID +ET+LHFWGP +K+ +KPSLV
Sbjct: 1 MIPSFLSFAGLYNGYLRRCFTGAGLLSQEIDIDIDNETSLHFWGP----TNKSTQKPSLV 56
Query: 59 LIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI 118
LIHGFGP A+WQWR+QVQF APHFN+YVPDLIFFG STT+S +RTE FQA S+GKLLEKI
Sbjct: 57 LIHGFGPMAMWQWRQQVQFLAPHFNLYVPDLIFFGESTTKSKERTENFQAESVGKLLEKI 116
Query: 119 GVERFSVVGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKRGDNEALVKRANLERIDH 177
GV++ VVGTSYGG VAY++A+M E++EKVVIASSGVNM + N AL+KRA L++I+
Sbjct: 117 GVKKCHVVGTSYGGIVAYNLAKMLGEEKIEKVVIASSGVNMTKNHNIALLKRAGLDKIED 176
Query: 178 LMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV-------------------------- 211
LMLP S QL+ L LAV+K + VP+FF DF+
Sbjct: 177 LMLPSSPQQLKNLMSLAVAKQIPFVPNFFLRDFLRRLYSDNRKEKMELLNGLSIGKVDTS 236
Query: 212 ------HDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIV 265
+VL++WG+ D IFP++MA ELKE++ KKARLE+I+ SHVPQIE P FN+I+
Sbjct: 237 NISPLQQEVLVLWGEDDNIFPVQMAHELKEVISKKARLELIKEASHVPQIEKPEEFNNII 296
Query: 266 KNFLR 270
NFL+
Sbjct: 297 LNFLQ 301
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297802672|ref|XP_002869220.1| hypothetical protein ARALYDRAFT_491367 [Arabidopsis lyrata subsp. lyrata] gi|297315056|gb|EFH45479.1| hypothetical protein ARALYDRAFT_491367 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 165/304 (54%), Positives = 216/304 (71%), Gaps = 35/304 (11%)
Query: 4 SFLSLVSLYRIYLRRCFASAGLSSQTIDIDDETTLHFWGPK-LEDDHKTLKKPSLVLIHG 62
S+LS L YLRRC SAGL+SQT+ ID ETT+HFWGP L+ +P ++L+HG
Sbjct: 5 SYLSPTRLLEGYLRRCLTSAGLTSQTLSIDSETTIHFWGPPPLDHRSDDDDRPVMLLLHG 64
Query: 63 FGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVE 121
FGP ++WQWR+Q+Q F+P F +Y PDL+FFG ST+ S RTE+FQA + KL+EKIGVE
Sbjct: 65 FGPSSMWQWRRQIQAFSPSVFRLYSPDLVFFGDSTSSSTNRTEVFQAECMAKLMEKIGVE 124
Query: 122 RFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLP 181
+++VVGTSYGGFVAYHMA+MWPE+VEKVVIASSG+NM++ D+E+L++R+N E I+ +MLP
Sbjct: 125 KYNVVGTSYGGFVAYHMAKMWPEKVEKVVIASSGINMRKCDSESLLQRSNCECIEKVMLP 184
Query: 182 ESASQLRTLTGLAVSKNL-DIVPDFFFNDFVH---------------------------- 212
+A++LRTL LA S L + PD +ND ++
Sbjct: 185 STATELRTLMALASSWRLVRMFPDALWNDVINNLYKKNRKEKIELLKGVTFGRNENLNID 244
Query: 213 ----DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNF 268
+VLIVWGD+DQIFP+KMA ELKE+LG+KA+LEII+NTSHVPQIE FN+IV F
Sbjct: 245 PLSQEVLIVWGDKDQIFPVKMAYELKEILGEKAKLEIIDNTSHVPQIECAQEFNNIVLKF 304
Query: 269 LRGS 272
L+GS
Sbjct: 305 LKGS 308
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297812307|ref|XP_002874037.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297319874|gb|EFH50296.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/293 (53%), Positives = 202/293 (68%), Gaps = 24/293 (8%)
Query: 1 MAPSFLSLVSLYRIYLRRCFASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLI 60
MAPSFLS+ LRR F+SAGLS QT+ ID ETT+ FWGP + +KPSL+L+
Sbjct: 1 MAPSFLSVAKFVEALLRRRFSSAGLSLQTLSIDSETTIQFWGPPPSSSSENTQKPSLLLL 60
Query: 61 HGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV 120
HGFGP A+WQW QV+ F+ F +YVPDL+FFG S++ R+E+FQA +GKL+EK+ V
Sbjct: 61 HGFGPSAVWQWSHQVKPFSQFFRLYVPDLVFFGGSSSSGENRSEMFQALCMGKLMEKLEV 120
Query: 121 ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML 180
ERFSV+GTSYGGFVAY+MA+M+PE+VEKVV+ASSGVN++R DNEA + RA I +ML
Sbjct: 121 ERFSVIGTSYGGFVAYNMAKMFPEKVEKVVLASSGVNLRRSDNEAFIARAKCHGIKEVML 180
Query: 181 PESASQLRTLTGLAVSKNLDIVPDFFFNDFV------------------------HDVLI 216
P SA+ LR +G+ SK LD VPDF NDF DV++
Sbjct: 181 PASATDLRRTSGMVSSKRLDYVPDFVLNDFCQEKAELLEGLSIGKDDKTNVSPIQQDVML 240
Query: 217 VWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFL 269
+WG+QDQ+FPLKMA +LKE+LG K L+II+ TSH+PQ E P FN IV +FL
Sbjct: 241 IWGEQDQVFPLKMAHDLKEMLGIKTTLKIIQKTSHIPQTEKPKEFNGIVMSFL 293
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|29294062|gb|AAO73899.1| hydrolase, alpha/beta fold family [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/293 (53%), Positives = 201/293 (68%), Gaps = 24/293 (8%)
Query: 1 MAPSFLSLVSLYRIYLRRCFASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLI 60
MAPSFLS+ LRR F+SAGLS QT+ ID ETT+ FWGP + +KPSL+L+
Sbjct: 1 MAPSFLSVARFVEALLRRRFSSAGLSLQTLSIDSETTIQFWGPPPSSSSENTQKPSLLLL 60
Query: 61 HGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV 120
HGFGP A+WQW QV+ + F +YVPDL+FFG S++ R+E+FQA +GKL+EK+ V
Sbjct: 61 HGFGPSAVWQWSHQVKPLSHFFRLYVPDLVFFGGSSSSGENRSEMFQALCMGKLMEKLEV 120
Query: 121 ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML 180
ERFSVVGTSYGGFVAY+MA+M+PE+VEKVV+ASSGVN++R DNEA + RA RI +ML
Sbjct: 121 ERFSVVGTSYGGFVAYNMAKMFPEKVEKVVLASSGVNLRRSDNEAFIARAKCHRIKEVML 180
Query: 181 PESASQLRTLTGLAVSKNLDIVPDFFFNDFV------------------------HDVLI 216
P SA+ LR +G+ SK LD VPDF NDF DV++
Sbjct: 181 PASATDLRRFSGMVSSKRLDYVPDFVLNDFCQEKAELLEGLSIGKDDKTNVSPIQQDVML 240
Query: 217 VWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFL 269
+WG+QDQ+FPLKMA +LKE+LG KA L++I+ TSH+PQ E FN V +FL
Sbjct: 241 IWGEQDQVFPLKMAHDLKEMLGTKATLKVIQKTSHIPQTEKSKEFNGFVMSFL 293
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356518177|ref|XP_003527758.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 167/307 (54%), Positives = 211/307 (68%), Gaps = 38/307 (12%)
Query: 1 MAPSFLSLVSLYRIYLRRCFASAGLSSQ--TIDIDDETTLHFWGPKLEDDHKTLKKPSLV 58
M S S VSLY Y+RRCF SAGL SQ ++D D ETT+HFWGP+ + +KPSLV
Sbjct: 1 MPSSSFSFVSLYSKYIRRCFTSAGLWSQALSVDKDGETTMHFWGPR---KVEAAQKPSLV 57
Query: 59 LIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI 118
LIHGFGP A+WQWR+QV+F APHFN+YVPDL+FFG S T+S +R+E+FQAAS+GKLL+K+
Sbjct: 58 LIHGFGPAAMWQWRRQVKFLAPHFNLYVPDLVFFGGSHTKSGERSEMFQAASVGKLLDKL 117
Query: 119 GVERFSVVGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKRGDNEALVKRANLERIDH 177
VE+F VVGTSYGG VAY++A+M ERV+KVVIASSGVNM N ALV+ + +E ID
Sbjct: 118 EVEKFHVVGTSYGGMVAYNLAKMLGQERVQKVVIASSGVNMTMSSNTALVQSSEMESIDD 177
Query: 178 LMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV-------------------------- 211
LMLP QLR L L++ +VPDF F+
Sbjct: 178 LMLPTKPHQLRKLMSLSIYNPPPLVPDFMLKAFIDELYGENKKEKLELLKGITIGRNDTS 237
Query: 212 ------HDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIV 265
+VLIVWG+QDQIFP+++A ELKE++ K ARLE+I+ TSHVPQ+E PG FN+I+
Sbjct: 238 NVSPLQQEVLIVWGEQDQIFPVQLAHELKEVISKNARLELIKETSHVPQMEKPGEFNNII 297
Query: 266 KNFLRGS 272
NFL+GS
Sbjct: 298 LNFLQGS 304
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 273 | ||||||
| TAIR|locus:2125909 | 307 | AT4G33180 [Arabidopsis thalian | 0.772 | 0.687 | 0.544 | 7.1e-61 | |
| TAIR|locus:2184777 | 311 | AT5G09430 [Arabidopsis thalian | 0.710 | 0.623 | 0.429 | 1.4e-48 | |
| TAIR|locus:505006573 | 328 | AT4G39955 [Arabidopsis thalian | 0.758 | 0.631 | 0.413 | 3.7e-46 | |
| TAIR|locus:2018856 | 332 | AT1G17430 [Arabidopsis thalian | 0.710 | 0.584 | 0.380 | 4.6e-42 | |
| TAIR|locus:2115435 | 317 | AT4G36610 [Arabidopsis thalian | 0.750 | 0.646 | 0.356 | 2.5e-39 | |
| TAIR|locus:2194744 | 314 | AT1G78210 [Arabidopsis thalian | 0.860 | 0.748 | 0.377 | 1.7e-36 | |
| TAIR|locus:2062126 | 313 | AT2G18360 "AT2G18360" [Arabido | 0.765 | 0.667 | 0.358 | 1.9e-28 | |
| TIGR_CMR|SPO_A0277 | 252 | SPO_A0277 "hydrolase, alpha/be | 0.358 | 0.388 | 0.368 | 3.7e-16 | |
| UNIPROTKB|P96851 | 291 | hsaD "4,5:9,10-diseco-3-hydrox | 0.600 | 0.563 | 0.281 | 1.1e-12 | |
| ZFIN|ZDB-GENE-080227-1 | 370 | ephx4 "epoxide hydrolase 4" [D | 0.366 | 0.270 | 0.310 | 2e-12 |
| TAIR|locus:2125909 AT4G33180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 116/213 (54%), Positives = 159/213 (74%)
Query: 4 SFLSLVSLYRIYLRRCFASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGF 63
S+LS L YLRRC +AGL+SQT+ ID ETT+HFWGP D +P ++L+HGF
Sbjct: 5 SYLSPTRLLEGYLRRCLRAAGLTSQTLSIDSETTIHFWGPPPLDHRSDDDRPVMLLLHGF 64
Query: 64 GPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVER 122
GP ++WQWR+Q+Q F+P F VY PDL+FFG ST+ S RTE+FQA + KL+ KIG+ +
Sbjct: 65 GPSSMWQWRRQMQAFSPSAFRVYSPDLVFFGDSTSSSTNRTEVFQAECMAKLMAKIGIGK 124
Query: 123 FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPE 182
++V GTSYGGFVAYHMA+MWPE+VEKVVIASSG+NM++ D E+L++R+N E I+ +MLP
Sbjct: 125 YNVAGTSYGGFVAYHMAKMWPEKVEKVVIASSGINMRKCDGESLLQRSNCECIEKVMLPS 184
Query: 183 SASQLRTLTGLAVSKNL-DIVPDFFFNDFVHDV 214
+A++ RTL LA S L + PD +ND ++++
Sbjct: 185 TATEFRTLMALASSWRLVRMFPDALWNDVINNL 217
|
|
| TAIR|locus:2184777 AT5G09430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 404 (147.3 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 88/205 (42%), Positives = 126/205 (61%)
Query: 17 RRCFASAGLSSQTIDIDD-----ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW 71
R+ FA+AGL S T D+ T +H W PK + KP+L+L+HGFG A+WQ+
Sbjct: 22 RQSFANAGLRSVTTDLSHGNSIASTAMHCWIPKSPNR----SKPNLLLLHGFGANAMWQY 77
Query: 72 RKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYG 131
+ ++ F FNVYVPDL+FFG S+T RTE FQA L +L+E GV+R ++VG SYG
Sbjct: 78 GEHLRAFTGRFNVYVPDLLFFGLSSTSEPNRTESFQARCLMRLMEAHGVQRMNIVGISYG 137
Query: 132 GFVAYHMARMWPERVEKVVIASSGVNMKRGDNE-ALVKRANLERIDHLMLPESASQLRTL 190
GFV Y +A +PE VEK+V+ +GV ++ D E L K NLE +++P++ +L+ L
Sbjct: 138 GFVGYSLAAQFPENVEKLVLCCAGVCLEEKDMEDGLFKVPNLEEATGILIPQTPEKLKEL 197
Query: 191 TGLAVSKNLDIVPDFFFNDFVHDVL 215
+ K + VP FF DF+ DV+
Sbjct: 198 IRFSFVKPIKGVPSFFLWDFI-DVM 221
|
|
| TAIR|locus:505006573 AT4G39955 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 389 (142.0 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
Identities = 88/213 (41%), Positives = 122/213 (57%)
Query: 1 MAPSFLSLVSLYRIYLRRCFASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLI 60
MA F + S + Y + F+ AGL S T D+ D T H W P L H KP+L+L+
Sbjct: 1 MASCFSYVSSRNKCY-QYSFSRAGLRSSTSDLGDGTVFHCWIP-LTHIHT---KPTLLLL 55
Query: 61 HGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV 120
HG G A+WQW + + F P FNVYVPDLIFFG S T R+E FQA + K ++ GV
Sbjct: 56 HGIGANAMWQWDRFIDRFIPRFNVYVPDLIFFGDSYTTRPDRSESFQATCVMKAMDAYGV 115
Query: 121 ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE-ALVKRANLERIDHLM 179
+V G SYGGFVAY +A + ERV++VV+ +GV ++ D+E + K + E ++
Sbjct: 116 RTMTVAGLSYGGFVAYSLAAQFKERVDRVVLICAGVALEEKDSEDGMFKVKSPEEAAAVL 175
Query: 180 LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVH 212
P+S S LR L L+ K +P F D++H
Sbjct: 176 FPQSPSMLRRLLQLSFYKPPIWIPSCFAMDYIH 208
|
|
| TAIR|locus:2018856 AT1G17430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 337 (123.7 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 81/213 (38%), Positives = 125/213 (58%)
Query: 7 SLVSLYRIYLRRCFASAGLSSQTIDIDD-ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP 65
S +SLY +L C L T+D+DD ETT+HFW H+ + + +LV++HG+G
Sbjct: 40 SFLSLY--FLVFC----DLRPVTVDLDDGETTVHFW----ISGHRRISRQNLVMLHGYGG 89
Query: 66 EAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG-VER-- 122
+ WQ+ QV + FN+++PDL+FFG S +++ R+ QA S+ L+K+G VE
Sbjct: 90 NSKWQFVHQVSDLSKSFNLFIPDLVFFGKSYSKNRDRSVEIQARSVVGGLKKLGCVEGGG 149
Query: 123 -FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLP 181
S+ SYGGFVAY MA +WP VEK+VI SSGV + A +K+ + +++P
Sbjct: 150 GISIYSISYGGFVAYKMAEIWPAMVEKLVIVSSGVGFTQQQKTAELKKHGGD-CSKILVP 208
Query: 182 ESASQLRTLTGLAVSKNL---DIVPDFFFNDFV 211
++ LR L ++++ L D VPDFF + F+
Sbjct: 209 KTPMDLRLLIKISMNTGLTFVDWVPDFFLSQFI 241
|
|
| TAIR|locus:2115435 AT4G36610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 304 (112.1 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 77/216 (35%), Positives = 116/216 (53%)
Query: 6 LSLVSLYRIYLRRCFASAGLSSQTIDIDDETTLHFWGPK--LEDDHKT--------LKKP 55
++ V + + L AG+ T++I+ T ++FW PK L+ + T KKP
Sbjct: 2 VNFVEVQKPLLYGLMKMAGVVPYTLEIEPGTKINFWVPKETLKKNSGTGKPTKPDKPKKP 61
Query: 56 SLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLL 115
++LIHGF E I W+ QV + ++VY+PDL+FFG S T + R+ FQA L K L
Sbjct: 62 VVLLIHGFAGEGIVTWQFQVGALSKKYSVYIPDLLFFGGSYTDNSDRSPAFQADCLVKGL 121
Query: 116 EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERI 175
+GV++F VG SYGG VA+ +A +P+ V +V++ S M NEA + R
Sbjct: 122 RILGVDKFVPVGFSYGGMVAFKIAEAYPDMVRAIVVSGSIPTMTDTINEASLNRLGFSSS 181
Query: 176 DHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV 211
L+LP S + L+ L +AV K L P F D++
Sbjct: 182 TDLLLPTSVTGLKALFTIAVHKPLWF-PKRLFKDYI 216
|
|
| TAIR|locus:2194744 AT1G78210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 96/254 (37%), Positives = 147/254 (57%)
Query: 10 SLYRIYLRRCFASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIW 69
+L R Y + F +GL TID+ D T ++FW K + + K KP+L+LIHG G AIW
Sbjct: 10 ALERTY-KSGFKRSGLRPVTIDLKDGTVVNFWVSKTKPESKP--KPNLLLIHGLGATAIW 66
Query: 70 QWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTS 129
QW + + +FN+Y+PDL+FFG S+T +R+++FQA +L + LE V++FS+VG S
Sbjct: 67 QWYDVARRLSRYFNLYIPDLVFFGGSSTTRPERSDIFQAQTLMRALEAQSVKKFSLVGLS 126
Query: 130 YGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALV-KRANLERIDHLMLPESASQLR 188
YGGFV Y MA M+ + VEKVVI + V ++ D +A V K ++L+ +++PES +LR
Sbjct: 127 YGGFVGYRMASMYADAVEKVVICCAAVCVEEKDMKAGVFKVSDLDEASKILVPESVKKLR 186
Query: 189 TLTGLAVSKNL--DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEII 246
L G K +VP +DF+ L +D + E +EL+ + II
Sbjct: 187 ELMGYIFYKPALARLVPTCLLHDFIEHALT----RDNM------EEKRELIKAIPKDRII 236
Query: 247 ENTSHVPQIENPGL 260
S +P+++ P L
Sbjct: 237 ---SEIPKLKQPTL 247
|
|
| TAIR|locus:2062126 AT2G18360 "AT2G18360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 80/223 (35%), Positives = 125/223 (56%)
Query: 6 LSLVSLYRIYLRRCFASAGLSSQTIDIDDETTLHFWGPK--LEDDHKTLK---------- 53
++ V L + L R AG+ T++++ T ++FW PK L+ K+ K
Sbjct: 2 VNFVDLQKPLLYRLMKLAGVIPYTVELEPGTKMNFWIPKETLKKTKKSDKNFAVEPQKPT 61
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGK 113
KP L+ IHGF E I W+ QV A ++VY+PDL+FFG S + + R+ FQA L K
Sbjct: 62 KPVLLFIHGFAAEGIVTWQFQVGSLAKKYSVYIPDLLFFGGSYSDNADRSPAFQAHCLVK 121
Query: 114 LLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE 173
L +G+E+F++VG SYGG VA+ +A +PE V+ +V++ S + M +E+ + + +
Sbjct: 122 SLRILGIEKFTLVGFSYGGMVAFKIAEEYPEMVQAMVVSGSILAMTDTISESNLNQLGFK 181
Query: 174 RIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLI 216
L+LP S L+TL LAV K + P F DF+ +V+I
Sbjct: 182 SSADLLLPTSVKGLKTLFTLAVHKPMWF-PKRLFKDFI-EVMI 222
|
|
| TIGR_CMR|SPO_A0277 SPO_A0277 "hydrolase, alpha/beta fold family" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 155 (59.6 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 38/103 (36%), Positives = 60/103 (58%)
Query: 55 PSLVLIHGF-GPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTR-SIQRTELFQAASLG 112
P+LV +HG+ G A QW ++++ F F+V P+L FG + R E AA LG
Sbjct: 13 PALVFVHGYLGGAA--QWAQEIERFKDAFDVIAPNLPGFGAAADRPGCASIEEMAAAVLG 70
Query: 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG 155
LL+++G+ F +VG S GG +A MA P+ V+++V+ +G
Sbjct: 71 -LLDELGIAEFLLVGHSMGGMIAQQMAADRPDAVKRLVLYGTG 112
|
|
| UNIPROTKB|P96851 hsaD "4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oa te hydrolase" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 145 (56.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 51/181 (28%), Positives = 84/181 (46%)
Query: 30 IDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI-W-QWRKQVQFFAPHFNVYVP 87
+D+D LH+ + +D ++VL+HG GP A W + + + A HF+V
Sbjct: 18 VDVDGPLKLHYHEAGVGNDQ------TVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAV 71
Query: 88 DLIFFGHSTTRSIQ-RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERV 146
D +GHS R+ + + A +L L +++G+ R +VG S GG A A +P R
Sbjct: 72 DQPGYGHSDKRAEHGQFNRYAAMALKGLFDQLGLGRVPLVGNSLGGGTAVRFALDYPARA 131
Query: 147 EKVVIASSG---VNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVP 203
++V+ G +N+ D VKR L + + P + L + KNL I P
Sbjct: 132 GRLVLMGPGGLSINLFAPDPTEGVKR--LSKFS--VAPTRENLEAFLRVMVYDKNL-ITP 186
Query: 204 D 204
+
Sbjct: 187 E 187
|
|
| ZFIN|ZDB-GENE-080227-1 ephx4 "epoxide hydrolase 4" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 137 (53.3 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTT-RSIQRTEL-FQAASL 111
KP ++ +HGF PE + WR Q++ F F V D+ +G S S + L + +
Sbjct: 97 KPLMLFLHGF-PEFWFSWRHQLREFKSEFRVVAVDMRGYGESDLPSSTESYRLDYLVTDI 155
Query: 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS 154
++E +G R +VG +GG +A+ A +PE V K+++ +S
Sbjct: 156 KDIVEYLGYNRCFLVGHDWGGIIAWLCAIHYPEMVTKLIVLNS 198
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 273 | |||
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 9e-31 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 2e-28 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 9e-19 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 6e-17 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 3e-16 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 2e-14 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 4e-13 | |
| TIGR01738 | 245 | TIGR01738, bioH, pimelyl-[acyl-carrier protein] me | 9e-10 | |
| PLN02578 | 354 | PLN02578, PLN02578, hydrolase | 1e-08 | |
| TIGR03056 | 278 | TIGR03056, bchO_mg_che_rel, putative magnesium che | 2e-08 | |
| COG1506 | 620 | COG1506, DAP2, Dipeptidyl aminopeptidases/acylamin | 6e-07 | |
| PLN02824 | 294 | PLN02824, PLN02824, hydrolase, alpha/beta fold fam | 9e-07 | |
| TIGR03343 | 282 | TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenyl | 1e-06 | |
| COG2021 | 368 | COG2021, MET2, Homoserine acetyltransferase [Amino | 3e-06 | |
| PRK08775 | 343 | PRK08775, PRK08775, homoserine O-acetyltransferase | 1e-05 | |
| PLN02894 | 402 | PLN02894, PLN02894, hydrolase, alpha/beta fold fam | 2e-05 | |
| TIGR03611 | 248 | TIGR03611, RutD, pyrimidine utilization protein D | 3e-05 | |
| TIGR01250 | 289 | TIGR01250, pro_imino_pep_2, proline-specific pepti | 4e-05 | |
| PRK10349 | 256 | PRK10349, PRK10349, carboxylesterase BioH; Provisi | 5e-05 | |
| TIGR01392 | 351 | TIGR01392, homoserO_Ac_trn, homoserine O-acetyltra | 3e-04 | |
| PRK03592 | 295 | PRK03592, PRK03592, haloalkane dehalogenase; Provi | 4e-04 | |
| PRK03204 | 286 | PRK03204, PRK03204, haloalkane dehalogenase; Provi | 0.001 | |
| TIGR02240 | 276 | TIGR02240, PHA_depoly_arom, poly(3-hydroxyalkanoat | 0.002 | |
| PLN02679 | 360 | PLN02679, PLN02679, hydrolase, alpha/beta fold fam | 0.002 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 9e-31
Identities = 57/209 (27%), Positives = 81/209 (38%), Gaps = 23/209 (11%)
Query: 57 LVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQ-AASLGKLL 115
+VL+HG G A WR + A + V PDL G S L AA L LL
Sbjct: 1 VVLLHGAGGSA-ESWRPLAEALAAGYRVLAPDLPGHGDSDGPPRTPYSLEDDAADLAALL 59
Query: 116 EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERI 175
+ +G+ +VG S GG VA A PERV +V+ S + D E L+ +
Sbjct: 60 DALGLGPVVLVGHSLGGAVALAAAARRPERVAGLVLISPPLR----DLEELLAADAAALL 115
Query: 176 DHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKE 235
L + LR VL++ G+ D + P + A L E
Sbjct: 116 ALLRAALLDADLREA----------------LARLTVPVLVIHGEDDPLVPPEAARRLAE 159
Query: 236 LLGKKARLEIIENTSHVPQIENPGLFNSI 264
L A L ++ H+P +E+P
Sbjct: 160 ALP-GAELVVLPGAGHLPHLEHPEEVAEA 187
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 2e-28
Identities = 57/264 (21%), Positives = 84/264 (31%), Gaps = 47/264 (17%)
Query: 54 KPSLVLIHGFGPEA-IWQWRKQV-QFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASL 111
P LVL+HGF + +W+ +V A + V PDL G S + A L
Sbjct: 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPA--GYSLSAYADDL 78
Query: 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRAN 171
LL+ +G+E+ +VG S GG VA +A P+RV +V+ +
Sbjct: 79 AALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGA 138
Query: 172 LERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHD------------------ 213
L LA L +
Sbjct: 139 APLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAAR 198
Query: 214 -------------------------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIEN 248
LI+ G+ D + P ++A L L ARL +I
Sbjct: 199 ADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPG 258
Query: 249 TSHVPQIENPGLFNSIVKNFLRGS 272
H P +E P F + + FL
Sbjct: 259 AGHFPHLEAPEAFAAALLAFLERL 282
|
Length = 282 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 9e-19
Identities = 67/284 (23%), Positives = 108/284 (38%), Gaps = 49/284 (17%)
Query: 21 ASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP 80
AG + + I T+ + +VLIHGFG + + W A
Sbjct: 105 EDAGPAPRKARIG-GRTVRYL------RLGEGDGTPVVLIHGFGGD-LNNWLFNHAALAA 156
Query: 81 HFNVYVPDLIFFGHSTTRSIQRTEL-FQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMA 139
V DL G S+ + L AA++ L+ +G+ER +VG S GG VA +A
Sbjct: 157 GRPVIALDLPGHGASSKA-VGAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLA 215
Query: 140 RMWPERVEKVV-IASSG----VNM----------KRGD----------NEALVKRANLER 174
P+RV + IA +G +N R + + ALV R +E
Sbjct: 216 ARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVED 275
Query: 175 IDHLMLPESASQLRTLTGLAVS------KNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLK 228
+ + L LA + + +D+ VL++WG+QD+I P
Sbjct: 276 LLKYKRLDGVDD--ALRALADALFAGGRQRVDLRDRL--ASLAIPVLVIWGEQDRIIPAA 331
Query: 229 MATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272
A L + ++ H+PQ+E N ++ FL +
Sbjct: 332 HAQGL----PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGKA 371
|
Length = 371 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 77.6 bits (192), Expect = 6e-17
Identities = 71/261 (27%), Positives = 109/261 (41%), Gaps = 54/261 (20%)
Query: 54 KPSLVLIHGF-GPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHST-TRSIQRTELFQAAS- 110
KP LV +HGF G A WQ ++ PHF DL G S I+R + + A
Sbjct: 2 KPVLVFLHGFLGSGADWQ--ALIELLGPHFRCLAIDLPGHGSSQSPSDIERYDFEEIAQL 59
Query: 111 -LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169
L LL+++G+E F +VG S GG +A + A +PERV+ +++ S + + E +R
Sbjct: 60 LLATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLAT-EEERAARR 118
Query: 170 ANLERI-----------------------DHLMLPESA-SQLRT---------------L 190
N E++ LP LR
Sbjct: 119 QNDEQLAQRFEQEGIEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRA 178
Query: 191 TGLAVSKNL-DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENT 249
TGL +L + VL + G++D+ F +++A E+++L+ L II N
Sbjct: 179 TGLGKQPSLWPKLQALKIP-----VLYLCGEKDEKF-VQIAKEMQKLI-PNLTLVIIANA 231
Query: 250 SHVPQIENPGLFNSIVKNFLR 270
H +ENP F I+ FL
Sbjct: 232 GHNIHLENPEAFAKILLAFLE 252
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 3e-16
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 46/229 (20%)
Query: 82 FNVYVPDLIFFGHST---TRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHM 138
F+V DL FG S+ + R + A L LL+ +G+++ ++VG S GG +A
Sbjct: 1 FDVIAFDLRGFGRSSPPKDFADYRFDDL-AEDLEALLDALGLDKVNLVGHSMGGLIALAY 59
Query: 139 ARMWPERVEKVVIASSGV-----------------------NMKRGDNEALVKRANLERI 175
A +P+RV+ +V+ + N EAL+ RA +++
Sbjct: 60 AAKYPDRVKALVLVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEALLGRA-IKQF 118
Query: 176 DHLMLPESASQLRTLTGLAVS----------KNLDIVPDFFFNDFVHD-------VLIVW 218
L P + L+ ++ + D LI+W
Sbjct: 119 QALGRPFVSDFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDRSAALKDIDVPTLIIW 178
Query: 219 GDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKN 267
GD D + P + +L L A+L +I++ H+ Q+E P ++
Sbjct: 179 GDDDPLVPPDASEKLAALFP-NAQLVVIDDAGHLAQLEKPDEVAELILK 226
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 68.2 bits (167), Expect = 2e-14
Identities = 44/198 (22%), Positives = 63/198 (31%), Gaps = 58/198 (29%)
Query: 57 LVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLL 115
+VL+HG G + + A +NV D G S A +L
Sbjct: 2 VVLLHGAG-GDPEAYAPLARALASRGYNVVAVDYPGHGAS----------LGAPDAEAVL 50
Query: 116 EK--IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE 173
+ ER +VG S GG VA +A P VV+A+ L+
Sbjct: 51 ADAPLDPERIVLVGHSLGGGVALLLAARDPRVKAAVVLAAGDPPD------------ALD 98
Query: 174 RIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATEL 233
+ L +P VLI+ G +D + P + A L
Sbjct: 99 DLAKLTVP--------------------------------VLIIHGTRDGVVPPEEAEAL 126
Query: 234 KELLGKKARLEIIENTSH 251
L A L +IE H
Sbjct: 127 AAALPGPAELVVIEGAGH 144
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 67.0 bits (164), Expect = 4e-13
Identities = 62/245 (25%), Positives = 95/245 (38%), Gaps = 34/245 (13%)
Query: 54 KPSLVLIHGFGPE-AIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLG 112
P LV I+ G + +W + P F V D G S + A +
Sbjct: 13 APVLVFINSLGTDLRMW--DPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVL 70
Query: 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE------AL 166
LL+ +G+ER G S GG +A +A P+RV +V+ S K G E A
Sbjct: 71 ALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVL--SNTAAKIGTPESWNARIAA 128
Query: 167 VKRANLERI----------DHLMLPESASQLRTLTGLAVSKNLD-------IVPDFFFND 209
V+ L + A +L + V + D + D F D
Sbjct: 129 VRAEGLAALADAVLERWFTPGFREAHPA-RLDLYRNMLVRQPPDGYAGCCAAIRDADFRD 187
Query: 210 FVHD----VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIV 265
+ L + GDQD P ++ E+ +L+ AR I H+P +E P FN+ +
Sbjct: 188 RLGAIAVPTLCIAGDQDGSTPPELVREIADLV-PGARFAEIRGAGHIPCVEQPEAFNAAL 246
Query: 266 KNFLR 270
++FLR
Sbjct: 247 RDFLR 251
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
| >gnl|CDD|130799 TIGR01738, bioH, pimelyl-[acyl-carrier protein] methyl ester esterase | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 9e-10
Identities = 58/250 (23%), Positives = 94/250 (37%), Gaps = 46/250 (18%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKL 114
LVLIHG+G A +R + + HF +++ DL G S F SL
Sbjct: 5 VHLVLIHGWGMNA-EVFRCLDEELSAHFTLHLVDLPGHGRSRG--------FGPLSLADA 55
Query: 115 LEKIGVE---RFSVVGTSYGGFVAYHMARMWPERVEKVV-IASSGVNMKRGDNEALVK-- 168
E I + +G S GG VA H+A P+RV +V +ASS R D +K
Sbjct: 56 AEAIAAQAPDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPD 115
Query: 169 ---------RANLER-------IDHLMLPESASQLRTL----------TGLAVSKNLDIV 202
+ +R + L P + R L + L+I+
Sbjct: 116 VLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEIL 175
Query: 203 PDFFFNDFVHDV----LIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP 258
+ ++ L ++G D + P K+ L +L + L I +H P + +
Sbjct: 176 ATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA-PHSELYIFAKAAHAPFLSHA 234
Query: 259 GLFNSIVKNF 268
F +++ F
Sbjct: 235 EAFCALLVAF 244
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (Pfam model pfam00561). Members of this family are restricted to the Proteobacteria [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]. Length = 245 |
| >gnl|CDD|215315 PLN02578, PLN02578, hydrolase | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 1e-08
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLG 112
+ +VLIHGFG A + WR + A + VY DL+ FG S I+ + +
Sbjct: 85 EGLPIVLIHGFGASA-FHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVA 143
Query: 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS 154
++++ E +VG S GGF A A +PE V V + +S
Sbjct: 144 DFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185
|
Length = 354 |
| >gnl|CDD|132100 TIGR03056, bchO_mg_che_rel, putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 2e-08
Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 6/99 (6%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELF---QAASL 111
P L+L+HG G WR + A F V PDL GH TR+ R A L
Sbjct: 29 PLLLLLHGTGAST-HSWRDLMPPLARSFRVVAPDLP--GHGFTRAPFRFRFTLPSMAEDL 85
Query: 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVV 150
L G+ V+G S G +A +A P VV
Sbjct: 86 SALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVV 124
|
Members of this family belong to the alpha/beta fold family hydrolases (pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity [Energy metabolism, Photosynthesis]. Length = 278 |
| >gnl|CDD|224423 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 6e-07
Identities = 51/234 (21%), Positives = 85/234 (36%), Gaps = 31/234 (13%)
Query: 37 TLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQ--VQFFA-PHFNVYVPDL---I 90
T+H W K K P +V IHG GP A + +Q A + V P+
Sbjct: 377 TIHGWLYKPPGFDPRKKYPLIVYIHG-GPSAQVGYSFNPEIQVLASAGYAVLAPNYRGST 435
Query: 91 FFGHSTTRSIQR----TELFQAASLGKLLEKIGV---ERFSVVGTSYGGFVAYHMARMWP 143
+G +I+ +L + L K+ + ER + G SYGG++ A P
Sbjct: 436 GYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP 495
Query: 144 ERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVP 203
R + V + GV+ E+ + PE + D P
Sbjct: 496 -RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPPEDREKYE-----------DRSP 543
Query: 204 DFFFNDFVHDVLIVWGDQDQIFP----LKMATELKELLGKKARLEIIENTSHVP 253
F+ ++ +L++ G++D P ++ LK GK L + + H
Sbjct: 544 IFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKR-KGKPVELVVFPDEGHGF 596
|
Length = 620 |
| >gnl|CDD|178419 PLN02824, PLN02824, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 9e-07
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHS---TTRSIQRTELFQAASL 111
P+LVL+HGFG A WRK A VY DL+ +G+S RS + +
Sbjct: 30 PALVLVHGFGGNAD-HWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETW 88
Query: 112 GKLL-----EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVI 151
G+ L + +G F V+ S GG V A PE V V++
Sbjct: 89 GEQLNDFCSDVVGDPAF-VICNSVGGVVGLQAAVDAPELVRGVML 132
|
Length = 294 |
| >gnl|CDD|132386 TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 1e-06
Identities = 56/257 (21%), Positives = 99/257 (38%), Gaps = 49/257 (19%)
Query: 56 SLVLIHGFGPEAI-WQ--WRKQVQFFAPHFNVYVPDLIFFGHSTTRSI--QRTELFQAAS 110
+++++HG GP A W +R F + V + D F S + QR L A +
Sbjct: 32 AVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG-LVNARA 90
Query: 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA 170
+ L++ + +E+ +VG S GG A + A +P+R+ K+++ G G +L
Sbjct: 91 VKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPG-----GLGPSLFAPM 145
Query: 171 NLERIDHLM------LPESASQLRT---------------------------LTGLAVSK 197
+E I L E+ Q+ L +S
Sbjct: 146 PMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISS 205
Query: 198 NLDIVPDFFFNDFVHDV----LIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVP 253
+ + + ++ L+ WG D+ PL +L + A+L + H
Sbjct: 206 QKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNM-PDAQLHVFSRCGHWA 264
Query: 254 QIENPGLFNSIVKNFLR 270
Q E+ FN +V +FLR
Sbjct: 265 QWEHADAFNRLVIDFLR 281
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. Length = 282 |
| >gnl|CDD|224932 COG2021, MET2, Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 3e-06
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 114 LLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEK-VVIASS 154
LL+ +G+++ +VVG S GG A A +P+RV + + IA++
Sbjct: 139 LLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATA 181
|
Length = 368 |
| >gnl|CDD|181553 PRK08775, PRK08775, homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 1e-05
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 107 QAASLGKLLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEKVVIAS 153
QA ++ LL+ +G+ R + VG SYG V A P RV +V+ S
Sbjct: 123 QADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVS 170
|
Length = 343 |
| >gnl|CDD|215484 PLN02894, PLN02894, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 2e-05
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHS-----TTRSIQRTELFQAA 109
P+LV++HG+G + +R A F V D + +G S T +S + TE +
Sbjct: 106 PTLVMVHGYGASQGFFFR-NFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFID 164
Query: 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEK-VVIASSGVN 157
S + + + F ++G S+GG+VA A PE V+ +++ +G +
Sbjct: 165 SFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFS 213
|
Length = 402 |
| >gnl|CDD|211851 TIGR03611, RutD, pyrimidine utilization protein D | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 3e-05
Identities = 49/239 (20%), Positives = 84/239 (35%), Gaps = 35/239 (14%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQ-AASLGK 113
P +VL G G + W Q+ F+V D G S + A + +
Sbjct: 13 PVVVLSSGLGGSGSY-WAPQLAVLTQRFHVVTYDHRGTGRSPGELPPDYSIAHMADDVLQ 71
Query: 114 LLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVI--ASSGVN-------------M 158
LL+ +G+ERF VG + GG + +A +PER+ +V+ S + +
Sbjct: 72 LLDALGIERFHFVGHALGGLIGLQLALDYPERLTSLVLINGWSRPDPHTRRCFDVRIALL 131
Query: 159 KRGDNEALVK---------------RANLERIDHLMLPESASQLRTLTGLAVSKNLDIVP 203
EA V L + L + L + + D+
Sbjct: 132 YHAGPEAYVHAQPLFLYPADWISENAPRLAADEAHALAHFPGKNNVLRRINALEAFDV-- 189
Query: 204 DFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFN 262
+ H VL++ D + P + L L A+L+++ H + +P FN
Sbjct: 190 SARLDRIRHPVLLIAARDDMLVPYTCSLRLAAAL-PNAQLKLLPYGGHASNVTDPETFN 247
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. Length = 248 |
| >gnl|CDD|188121 TIGR01250, pro_imino_pep_2, proline-specific peptidase, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 4e-05
Identities = 41/203 (20%), Positives = 87/203 (42%), Gaps = 53/203 (26%)
Query: 116 EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS-------GVNMKR------GD 162
EK+G+++F ++G S+GG +A A + + ++ ++I+S + R +
Sbjct: 92 EKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPE 151
Query: 163 NEALVKRAN----------LERIDHLML---------PESASQLRTLTGLAV-------- 195
A +KR E ++ PE+ L++ V
Sbjct: 152 VRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRLRKWPEALKHLKSGGNTNVYNIMQGPN 211
Query: 196 ----SKNLDIVPDFFFNDFVHDV----LIVWGDQDQIFPLKMATELKELLGKKARLEIIE 247
+ NL D+ D + ++ L+ G+ D + + A E++EL+ +RL +
Sbjct: 212 EFTITGNLK---DWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELI-AGSRLVVFP 266
Query: 248 NTSHVPQIENPGLFNSIVKNFLR 270
+ SH+ IE+P ++ ++ +F+R
Sbjct: 267 DGSHMTMIEDPEVYFKLLSDFIR 289
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase. Length = 289 |
| >gnl|CDD|137836 PRK10349, PRK10349, carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 5e-05
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 57 LVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLE 116
LVL+HG+G A WR + + HF +++ DL FG R+ F A SL + E
Sbjct: 16 LVLLHGWGLNA-EVWRCIDEELSSHFTLHLVDLPGFG--------RSRGFGALSLADMAE 66
Query: 117 KI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS 154
+ ++ +G S GG VA +A PERV+ +V +S
Sbjct: 67 AVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVAS 107
|
Length = 256 |
| >gnl|CDD|233393 TIGR01392, homoserO_Ac_trn, homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 3e-04
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 114 LLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEK-VVIASS 154
LL+ +G+E+ +VVG S GG A A +PERV VV+A+S
Sbjct: 119 LLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes [Amino acid biosynthesis, Aspartate family]. Length = 351 |
| >gnl|CDD|235135 PRK03592, PRK03592, haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKL 114
+V +HG P + + WR + A PDLI G S I T A L
Sbjct: 28 DPIVFLHG-NPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDAW 86
Query: 115 LEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVV 150
+ +G++ +VG +G + + A P+RV +
Sbjct: 87 FDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIA 122
|
Length = 295 |
| >gnl|CDD|179554 PRK03204, PRK03204, haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.001
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFG---HSTTRSIQRTELFQAASL 111
P ++L HG P + +R + F PD + FG + Q E A +
Sbjct: 35 PPILLCHG-NPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEH--ARVI 91
Query: 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS 154
G+ ++ +G++R+ +G +GG ++ +A +RV VV+ ++
Sbjct: 92 GEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNT 134
|
Length = 286 |
| >gnl|CDD|131294 TIGR02240, PHA_depoly_arom, poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.002
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP--EAIWQWRKQVQFFAPHFNVY 85
+TID+D ++ P E T L++ +G G E ++ + ++ P V
Sbjct: 5 RTIDLDGQSIRTAVRPGKE--GLT----PLLIFNGIGANLELVFPF---IEALDPDLEVI 55
Query: 86 VPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPER 145
D+ G S+T A ++L+ + + + +G S+GG +A A +PER
Sbjct: 56 AFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPER 115
Query: 146 VEKVVIA--SSGVNMKRGDNEALVKRANLER 174
+K+++A ++G M G + L+ A+ R
Sbjct: 116 CKKLILAATAAGAVMVPGKPKVLMMMASPRR 146
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid [Energy metabolism, Other]. Length = 276 |
| >gnl|CDD|178283 PLN02679, PLN02679, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.002
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 47 DDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHS 95
T P ++L+HGFG +I WR+ + A ++ VY DL+ FG S
Sbjct: 81 SPEVTSSGPPVLLVHGFGA-SIPHWRRNIGVLAKNYTVYAIDLLGFGAS 128
|
Length = 360 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 273 | |||
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 100.0 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 100.0 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 100.0 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 100.0 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.98 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.98 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.97 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.97 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.97 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.97 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.97 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.97 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.97 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.97 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.97 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.97 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.97 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.97 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.97 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.97 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.96 | |
| PLN02511 | 388 | hydrolase | 99.96 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.96 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.96 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.96 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.96 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.96 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.95 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.94 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.94 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.93 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.93 | |
| PRK10566 | 249 | esterase; Provisional | 99.93 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.93 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.92 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.91 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.91 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.91 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.91 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.91 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.89 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.89 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.89 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.87 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.87 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.86 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.86 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.85 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.85 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.85 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.85 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.85 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.85 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.83 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.82 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.82 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.82 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.82 | |
| PLN00021 | 313 | chlorophyllase | 99.81 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.81 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.8 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.8 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.79 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.79 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.77 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.77 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.76 | |
| PRK10115 | 686 | protease 2; Provisional | 99.74 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.73 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.73 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.72 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.72 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.71 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.71 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.7 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.69 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.67 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.66 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.65 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.65 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.65 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.63 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.63 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.62 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 99.6 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.59 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.58 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.58 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.57 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.56 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.56 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.52 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.51 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.5 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.5 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.5 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.49 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.48 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.47 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.46 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.45 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.44 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.42 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 99.42 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.42 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.41 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.39 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.38 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.38 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 99.38 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.35 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 99.35 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.34 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 99.34 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.33 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.32 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.32 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 99.31 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.3 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 99.26 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 99.22 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 99.21 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 99.17 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 99.14 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 99.14 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 99.13 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 99.11 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 99.09 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 99.06 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 99.05 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 99.04 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 99.03 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 99.01 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 99.0 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 99.0 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.96 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.89 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.87 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.86 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 98.85 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.8 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.78 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 98.71 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 98.71 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.65 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.65 | |
| PLN02209 | 437 | serine carboxypeptidase | 98.65 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.64 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 98.61 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.61 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.6 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.58 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 98.55 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 98.53 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 98.51 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.5 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.5 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 98.49 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.43 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 98.42 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 98.37 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 98.36 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 98.34 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 98.31 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 98.25 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 98.24 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 98.24 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 98.21 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 98.2 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 98.02 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 98.02 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 98.01 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 97.97 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.88 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 97.84 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 97.83 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 97.79 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.78 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.76 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 97.73 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 97.7 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.67 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.44 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 97.42 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 97.39 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 97.32 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 97.3 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 97.21 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 97.18 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 97.18 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 97.14 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 97.06 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 97.01 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 96.98 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 96.83 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 96.82 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 96.76 | |
| PLN02162 | 475 | triacylglycerol lipase | 96.69 | |
| PLN00413 | 479 | triacylglycerol lipase | 96.68 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 96.61 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 96.51 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 96.49 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.49 | |
| PLN02571 | 413 | triacylglycerol lipase | 96.41 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 96.27 | |
| PLN02408 | 365 | phospholipase A1 | 96.22 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 96.15 | |
| PLN02934 | 515 | triacylglycerol lipase | 96.04 | |
| PLN02310 | 405 | triacylglycerol lipase | 95.83 | |
| PLN02324 | 415 | triacylglycerol lipase | 95.74 | |
| PLN02802 | 509 | triacylglycerol lipase | 95.6 | |
| PLN02753 | 531 | triacylglycerol lipase | 95.44 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 95.27 | |
| PLN02719 | 518 | triacylglycerol lipase | 95.25 | |
| PLN02761 | 527 | lipase class 3 family protein | 95.23 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 95.19 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 94.74 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 94.59 | |
| PLN02847 | 633 | triacylglycerol lipase | 94.57 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 94.51 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 94.51 | |
| PF09949 | 100 | DUF2183: Uncharacterized conserved protein (DUF218 | 93.92 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 93.86 | |
| KOG4389 | 601 | consensus Acetylcholinesterase/Butyrylcholinestera | 92.87 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 92.06 | |
| PF09994 | 277 | DUF2235: Uncharacterized alpha/beta hydrolase doma | 89.34 | |
| COG3673 | 423 | Uncharacterized conserved protein [Function unknow | 86.72 | |
| KOG2385 | 633 | consensus Uncharacterized conserved protein [Funct | 84.96 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 84.64 | |
| COG4822 | 265 | CbiK Cobalamin biosynthesis protein CbiK, Co2+ che | 83.93 | |
| PF10081 | 289 | Abhydrolase_9: Alpha/beta-hydrolase family; InterP | 83.65 |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=232.95 Aligned_cols=240 Identities=21% Similarity=0.308 Sum_probs=176.7
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC---
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS--- 99 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~--- 99 (273)
...+.++++. +|.+++|...| + ++++|||+||++++. ..|+.+++.|+++|+|+++|+||||.|+.+.
T Consensus 6 ~~~~~~~~~~-~~~~i~y~~~G------~-~~~~vlllHG~~~~~-~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~ 76 (294)
T PLN02824 6 PQVETRTWRW-KGYNIRYQRAG------T-SGPALVLVHGFGGNA-DHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRS 76 (294)
T ss_pred CCCCCceEEE-cCeEEEEEEcC------C-CCCeEEEECCCCCCh-hHHHHHHHHHHhCCeEEEEcCCCCCCCCCCcccc
Confidence 3456778888 89999999875 2 347999999999999 9999999999988999999999999998653
Q ss_pred ----ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC---c--chHHH----
Q 024042 100 ----IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR---G--DNEAL---- 166 (273)
Q Consensus 100 ----~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~---~--~~~~~---- 166 (273)
..++.+++++++.+++++++.++++++||||||.+++.++.++|++|+++|++++...... . .....
T Consensus 77 ~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~ 156 (294)
T PLN02824 77 APPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAF 156 (294)
T ss_pred ccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHH
Confidence 2478999999999999999999999999999999999999999999999999997542210 0 00100
Q ss_pred hhhhhh--------------hhhhhc----cCC---CChHHHHHHhh------------hhhccCCCCChhhHHhhhhcc
Q 024042 167 VKRANL--------------ERIDHL----MLP---ESASQLRTLTG------------LAVSKNLDIVPDFFFNDFVHD 213 (273)
Q Consensus 167 ~~~~~~--------------~~~~~~----~~~---~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~p 213 (273)
...... ...... ... ........... ..............+.++..|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 236 (294)
T PLN02824 157 QNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCP 236 (294)
T ss_pred HHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCC
Confidence 000000 000000 000 00001111000 000000011223446677889
Q ss_pred EEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 214 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+|+|+|++|..+|.+.++.+.+.. ++.++++++++||+++.|+|+++.+.|.+|++++
T Consensus 237 ~lvi~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 237 VLIAWGEKDPWEPVELGRAYANFD-AVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred eEEEEecCCCCCChHHHHHHHhcC-CccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 999999999999999998887766 7789999999999999999999999999999864
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=226.44 Aligned_cols=237 Identities=20% Similarity=0.252 Sum_probs=174.2
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHH
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTEL 105 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~ 105 (273)
-.+++++ +|.+++|+..+ .+.++++|||+||++++. ..|..+++.|.+.|+|+++|+||||.|+.+...++.+
T Consensus 3 ~~~~~~~-~~~~~~~~~~~-----~~~~~~plvllHG~~~~~-~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~ 75 (276)
T TIGR02240 3 IFRTIDL-DGQSIRTAVRP-----GKEGLTPLLIFNGIGANL-ELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFP 75 (276)
T ss_pred eEEEecc-CCcEEEEEEec-----CCCCCCcEEEEeCCCcch-HHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHH
Confidence 3567777 88899998752 133457999999999999 8999999999888999999999999998766667899
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC--cchHHHhhhhhhhhh--------
Q 024042 106 FQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR--GDNEALVKRANLERI-------- 175 (273)
Q Consensus 106 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~-------- 175 (273)
.+++++.++++.++.++++|+||||||.+|+.+|.++|++++++|+++++..... ...............
T Consensus 76 ~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (276)
T TIGR02240 76 GLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIH 155 (276)
T ss_pred HHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccc
Confidence 9999999999999999999999999999999999999999999999998764321 101100000000000
Q ss_pred --hhccC---CCChHHHHHHhhhhh-----------ccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcC
Q 024042 176 --DHLML---PESASQLRTLTGLAV-----------SKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGK 239 (273)
Q Consensus 176 --~~~~~---~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~ 239 (273)
..... ............... ...........+.++..|+|+++|++|+++|++..+.+.+.+ +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~-~ 234 (276)
T TIGR02240 156 IAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRI-P 234 (276)
T ss_pred hhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhC-C
Confidence 00000 000000000000000 000011112335677789999999999999999999999999 8
Q ss_pred CcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 240 KARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 240 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+.+++++++ ||+.+.++|+++++.|.+|+++
T Consensus 235 ~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 235 NAELHIIDD-GHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred CCEEEEEcC-CCchhhccHHHHHHHHHHHHHH
Confidence 999999984 9999999999999999999975
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=224.38 Aligned_cols=239 Identities=15% Similarity=0.231 Sum_probs=171.5
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccc
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQR 102 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~ 102 (273)
.+++.+++++ +|.+++|...| ++++|||+||++++. ..|+.+++.|.+.++|+++|+||+|.|+.+...+
T Consensus 5 ~~~~~~~~~~-~g~~i~y~~~G--------~g~~vvllHG~~~~~-~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~ 74 (295)
T PRK03592 5 PPGEMRRVEV-LGSRMAYIETG--------EGDPIVFLHGNPTSS-YLWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDY 74 (295)
T ss_pred CCCcceEEEE-CCEEEEEEEeC--------CCCEEEEECCCCCCH-HHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCC
Confidence 3556677887 89999999875 357999999999998 9999999999888999999999999998876678
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc--chH---HHhhhhhhhh---
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG--DNE---ALVKRANLER--- 174 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~--~~~---~~~~~~~~~~--- 174 (273)
+..++++++.+++++++.++++++|||+||.+|+.++.++|++++++|++++....... ... ..........
T Consensus 75 ~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (295)
T PRK03592 75 TFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGE 154 (295)
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCccccc
Confidence 99999999999999999999999999999999999999999999999999974322110 000 0010000000
Q ss_pred ---------hhhccC-----CCChHHHHHHhhhh-----------hccC--CCCC----------hhhHHhhhhccEEEE
Q 024042 175 ---------IDHLML-----PESASQLRTLTGLA-----------VSKN--LDIV----------PDFFFNDFVHDVLIV 217 (273)
Q Consensus 175 ---------~~~~~~-----~~~~~~~~~~~~~~-----------~~~~--~~~~----------~~~~~~~~~~p~l~i 217 (273)
...... .............. +... .... ....+.++.+|+|+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 234 (295)
T PRK03592 155 EMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLI 234 (295)
T ss_pred ccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEE
Confidence 000000 00011010000000 0000 0000 012234567799999
Q ss_pred ecCCCCCCChHHHHHHH-HHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 218 WGDQDQIFPLKMATELK-ELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 218 ~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+|++|.++++.....+. +.. ++.++++++++||+++.++|+++.+.|.+|+++.
T Consensus 235 ~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 235 NAEPGAILTTGAIRDWCRSWP-NQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred eccCCcccCcHHHHHHHHHhh-hhcceeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence 99999999555454544 445 7899999999999999999999999999999864
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=222.48 Aligned_cols=242 Identities=19% Similarity=0.291 Sum_probs=171.6
Q ss_pred hhCCCceeEEecCCc-----ceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCC
Q 024042 21 ASAGLSSQTIDIDDE-----TTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGH 94 (273)
Q Consensus 21 ~~~~~~~~~~~~~~g-----~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~ 94 (273)
....+..+++++ ++ .+++|...| ++++|+|||+||++++. ..|..+++.|++. |+|+++|+||||.
T Consensus 15 ~~~~~~~~~~~~-~~~~~~~~~i~y~~~G------~~~~~~lvliHG~~~~~-~~w~~~~~~L~~~gy~vi~~Dl~G~G~ 86 (302)
T PRK00870 15 PDYPFAPHYVDV-DDGDGGPLRMHYVDEG------PADGPPVLLLHGEPSWS-YLYRKMIPILAAAGHRVIAPDLIGFGR 86 (302)
T ss_pred cCCCCCceeEee-cCCCCceEEEEEEecC------CCCCCEEEEECCCCCch-hhHHHHHHHHHhCCCEEEEECCCCCCC
Confidence 344567788888 45 679999876 33568999999999888 8999999999865 9999999999999
Q ss_pred CCCCC--ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc-chHHHhhhhh
Q 024042 95 STTRS--IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG-DNEALVKRAN 171 (273)
Q Consensus 95 s~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~-~~~~~~~~~~ 171 (273)
|+.+. ..++.+++++++.+++++++.++++++|||+||.+|+.++.++|++++++|++++....... ..........
T Consensus 87 S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 166 (302)
T PRK00870 87 SDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRA 166 (302)
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhc
Confidence 97654 34688999999999999999999999999999999999999999999999999875332111 0000000000
Q ss_pred ---------hhhhh-hcc-CCCChHHHHHHhh--------h---hhc-----cCCC--C-Ch---hhHHhhhhccEEEEe
Q 024042 172 ---------LERID-HLM-LPESASQLRTLTG--------L---AVS-----KNLD--I-VP---DFFFNDFVHDVLIVW 218 (273)
Q Consensus 172 ---------~~~~~-~~~-~~~~~~~~~~~~~--------~---~~~-----~~~~--~-~~---~~~~~~~~~p~l~i~ 218 (273)
..... ... ............. . ... .... . .. ...+.++..|+++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 246 (302)
T PRK00870 167 FSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAF 246 (302)
T ss_pred ccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEe
Confidence 00000 000 0001011111000 0 000 0000 0 00 012356677999999
Q ss_pred cCCCCCCChHHHHHHHHHhcCCcE---EEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 219 GDQDQIFPLKMATELKELLGKKAR---LEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 219 g~~D~~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
|++|.++|.+. +.+.+.+ ++.+ +.+++++||+++.++|+++.+.|.+|++++
T Consensus 247 G~~D~~~~~~~-~~~~~~~-~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 247 SDSDPITGGGD-AILQKRI-PGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred cCCCCcccCch-HHHHhhc-ccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 99999999866 7888888 6655 789999999999999999999999999875
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=223.38 Aligned_cols=240 Identities=20% Similarity=0.311 Sum_probs=166.4
Q ss_pred eeEEecCCcc-eEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC-ccccH
Q 024042 27 SQTIDIDDET-TLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS-IQRTE 104 (273)
Q Consensus 27 ~~~~~~~~g~-~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~-~~~~~ 104 (273)
.++++. +|. +++|...|.. .....+|+|||+||++++. ..|..+++.|+++|+|+++|+||||.|+.+. ..++.
T Consensus 63 ~~~~~~-~g~~~i~Y~~~G~g--~~~~~gp~lvllHG~~~~~-~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~ 138 (360)
T PLN02679 63 CKKWKW-KGEYSINYLVKGSP--EVTSSGPPVLLVHGFGASI-PHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTM 138 (360)
T ss_pred CceEEE-CCceeEEEEEecCc--ccCCCCCeEEEECCCCCCH-HHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccH
Confidence 345666 555 8999987610 0011458999999999998 9999999999888999999999999998654 35788
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHH-hCCcccceEEEecCCCCCCCcc--hHHHh----------hhh-
Q 024042 105 LFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR-MWPERVEKVVIASSGVNMKRGD--NEALV----------KRA- 170 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~v~~~v~~~~~~~~~~~~--~~~~~----------~~~- 170 (273)
+++++++.+++++++.++++|+||||||.+++.++. .+|++|+++|++++........ ..... ...
T Consensus 139 ~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (360)
T PLN02679 139 ETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLL 218 (360)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHh
Confidence 999999999999999999999999999999998887 4799999999999764321100 00000 000
Q ss_pred ----------h----hhhhhh----ccCC---CChHHHHHHh------------hhhhccCCCCChhhHHhhhhccEEEE
Q 024042 171 ----------N----LERIDH----LMLP---ESASQLRTLT------------GLAVSKNLDIVPDFFFNDFVHDVLIV 217 (273)
Q Consensus 171 ----------~----~~~~~~----~~~~---~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~p~l~i 217 (273)
. ...+.. .... .......... ...............+.++..|+|++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii 298 (360)
T PLN02679 219 KQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVL 298 (360)
T ss_pred hchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEE
Confidence 0 000000 0000 0000000000 00000000111223456677899999
Q ss_pred ecCCCCCCChHH-----HHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 218 WGDQDQIFPLKM-----ATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 218 ~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+|++|.++|.+. .+.+.+.+ ++.++++++++||+++.|+|+++.+.|.+||++
T Consensus 299 ~G~~D~~~p~~~~~~~~~~~l~~~i-p~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 299 WGDQDPFTPLDGPVGKYFSSLPSQL-PNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred EeCCCCCcCchhhHHHHHHhhhccC-CceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 999999998763 23455566 889999999999999999999999999999975
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=214.64 Aligned_cols=235 Identities=19% Similarity=0.269 Sum_probs=166.7
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-cc
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI-QR 102 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~-~~ 102 (273)
.++.+.+++ +|.+++|...| ++++|||+||++.+. ..|..+.+.|.++|+|+++|+||||.|+.+.. .+
T Consensus 13 ~~~~~~~~~-~~~~i~y~~~G--------~~~~iv~lHG~~~~~-~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~ 82 (286)
T PRK03204 13 PFESRWFDS-SRGRIHYIDEG--------TGPPILLCHGNPTWS-FLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGY 82 (286)
T ss_pred cccceEEEc-CCcEEEEEECC--------CCCEEEEECCCCccH-HHHHHHHHHHhCCcEEEEECCCCCCCCCCCCcccc
Confidence 467788888 78899998875 357999999999887 88999999998889999999999999986543 46
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhh-h----hh-----
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR-A----NL----- 172 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~-~----~~----- 172 (273)
+.+++++++.+++++++.++++++||||||.+++.++..+|++++++|++++............... . ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (286)
T PRK03204 83 QIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILR 162 (286)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhh
Confidence 7889999999999999999999999999999999999999999999999877542211100000000 0 00
Q ss_pred -hhh-hhcc-----CCCChHHHHHHhhh------------hhccCCCCC--hhhH---Hhh--hhccEEEEecCCCCCCC
Q 024042 173 -ERI-DHLM-----LPESASQLRTLTGL------------AVSKNLDIV--PDFF---FND--FVHDVLIVWGDQDQIFP 226 (273)
Q Consensus 173 -~~~-~~~~-----~~~~~~~~~~~~~~------------~~~~~~~~~--~~~~---~~~--~~~p~l~i~g~~D~~~~ 226 (273)
... ...+ ..........+... ......... .... ..+ ...|+++|+|++|.+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~ 242 (286)
T PRK03204 163 RNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFR 242 (286)
T ss_pred hhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccC
Confidence 000 0000 00011111111000 000000000 0000 001 15799999999999886
Q ss_pred hH-HHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHh
Q 024042 227 LK-MATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFL 269 (273)
Q Consensus 227 ~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 269 (273)
+. ..+.+.+.+ ++.++++++++||+++.++|+++.+.|.+||
T Consensus 243 ~~~~~~~~~~~i-p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 243 PKTILPRLRATF-PDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred cHHHHHHHHHhc-CCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 54 578888888 8999999999999999999999999999997
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-33 Score=216.90 Aligned_cols=231 Identities=23% Similarity=0.376 Sum_probs=169.4
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHH
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
..+.. +|.+++|...+ ++|+||++||++++. ..|..+++.|+++|+|+++|+||+|.|+.+...++...+
T Consensus 69 ~~~~~-~~~~i~Y~~~g--------~g~~vvliHG~~~~~-~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~ 138 (354)
T PLN02578 69 NFWTW-RGHKIHYVVQG--------EGLPIVLIHGFGASA-FHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVW 138 (354)
T ss_pred eEEEE-CCEEEEEEEcC--------CCCeEEEECCCCCCH-HHHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHH
Confidence 33444 67889988764 457899999999998 999999999988899999999999999987777888999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch-------------HH-Hhhhhh--
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN-------------EA-LVKRAN-- 171 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~-------------~~-~~~~~~-- 171 (273)
++++.++++.+..++++++|||+||.+|+.+|.++|++++++|++++......... .. ......
T Consensus 139 a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (354)
T PLN02578 139 RDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEW 218 (354)
T ss_pred HHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHH
Confidence 99999999999889999999999999999999999999999999987543221100 00 000000
Q ss_pred h---------------hhh----hhccCCC--ChHH-HH----------------HHhhhhhccCCCCChhhHHhhhhcc
Q 024042 172 L---------------ERI----DHLMLPE--SASQ-LR----------------TLTGLAVSKNLDIVPDFFFNDFVHD 213 (273)
Q Consensus 172 ~---------------~~~----~~~~~~~--~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~~p 213 (273)
. ... ....... .... .. ..................+.++..|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 298 (354)
T PLN02578 219 FQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCP 298 (354)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCC
Confidence 0 000 0000000 0000 00 0000000001111223455677889
Q ss_pred EEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 214 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
+++++|++|.+++.+.++.+.+.+ ++.+++.+ ++||+++.|+|+++.+.|.+|++
T Consensus 299 vLiI~G~~D~~v~~~~~~~l~~~~-p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 299 LLLLWGDLDPWVGPAKAEKIKAFY-PDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 999999999999999999999998 89999999 59999999999999999999986
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=212.06 Aligned_cols=236 Identities=18% Similarity=0.215 Sum_probs=171.3
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-cccH
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI-QRTE 104 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~-~~~~ 104 (273)
..+.+++ +|.+++|...+ ..++|+|||+||++++. ..|..+.+.|+++|+|+++|+||||.|..+.. .++.
T Consensus 7 ~~~~~~~-~~~~~~~~~~g------~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 78 (278)
T TIGR03056 7 CSRRVTV-GPFHWHVQDMG------PTAGPLLLLLHGTGAST-HSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTL 78 (278)
T ss_pred ccceeeE-CCEEEEEEecC------CCCCCeEEEEcCCCCCH-HHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCH
Confidence 3456677 89999998886 34568999999999998 89999999998889999999999999986655 5789
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch----HHHhhhh-----h----
Q 024042 105 LFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN----EALVKRA-----N---- 171 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~----~~~~~~~-----~---- 171 (273)
+.+++++.+++++++.++++++||||||.+++.++.++|++++++|++++......... ....... .
T Consensus 79 ~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (278)
T TIGR03056 79 PSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMM 158 (278)
T ss_pred HHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHH
Confidence 99999999999999889999999999999999999999999999999987543221100 0000000 0
Q ss_pred ------hhhhhhcc-------CCCChHHHHHHhhhh--------hccCCCC-ChhhHHhhhhccEEEEecCCCCCCChHH
Q 024042 172 ------LERIDHLM-------LPESASQLRTLTGLA--------VSKNLDI-VPDFFFNDFVHDVLIVWGDQDQIFPLKM 229 (273)
Q Consensus 172 ------~~~~~~~~-------~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~p~l~i~g~~D~~~~~~~ 229 (273)
........ ............... ....... .....+.++..|+++++|++|..+|.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~ 238 (278)
T TIGR03056 159 SRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDE 238 (278)
T ss_pred HhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHH
Confidence 00000000 000000000000000 0000000 0012234566799999999999999999
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 230 ATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.+.+.+.+ ++++++.++++||+++.++|+++.+.|.+|++
T Consensus 239 ~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 239 SKRAATRV-PTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred HHHHHHhc-cCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 99999888 89999999999999999999999999999985
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=203.58 Aligned_cols=243 Identities=21% Similarity=0.355 Sum_probs=177.6
Q ss_pred hhCCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCC
Q 024042 21 ASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRS 99 (273)
Q Consensus 21 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~ 99 (273)
...+++..+++. +|.+++|.+.+ .+++|.|+++||+.... ..|+.....|+.. |+|+++|+||+|.|+.+.
T Consensus 18 ~~~~~~hk~~~~-~gI~~h~~e~g------~~~gP~illlHGfPe~w-yswr~q~~~la~~~~rviA~DlrGyG~Sd~P~ 89 (322)
T KOG4178|consen 18 NLSAISHKFVTY-KGIRLHYVEGG------PGDGPIVLLLHGFPESW-YSWRHQIPGLASRGYRVIAPDLRGYGFSDAPP 89 (322)
T ss_pred ChhhcceeeEEE-ccEEEEEEeec------CCCCCEEEEEccCCccc-hhhhhhhhhhhhcceEEEecCCCCCCCCCCCC
Confidence 445677888888 88999999887 78899999999999999 9999999999998 999999999999999776
Q ss_pred c--cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHH-hhhhh----h
Q 024042 100 I--QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL-VKRAN----L 172 (273)
Q Consensus 100 ~--~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~-~~~~~----~ 172 (273)
. .++....+.++..++++++.++++++||+||+.+|+.++..+|++++++|.++.....+....... ..... .
T Consensus 90 ~~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~ 169 (322)
T KOG4178|consen 90 HISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYI 169 (322)
T ss_pred CcceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCcccee
Confidence 5 579999999999999999999999999999999999999999999999999987665221110000 00000 0
Q ss_pred ------------------hhhhh----------ccCC---------CChHHHHHHhhhh----------hccCCCCCh--
Q 024042 173 ------------------ERIDH----------LMLP---------ESASQLRTLTGLA----------VSKNLDIVP-- 203 (273)
Q Consensus 173 ------------------~~~~~----------~~~~---------~~~~~~~~~~~~~----------~~~~~~~~~-- 203 (273)
..... ...+ .....++...... ++++.....
T Consensus 170 ~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a 249 (322)
T KOG4178|consen 170 CLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEA 249 (322)
T ss_pred EeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchh
Confidence 00000 0000 0011111111110 111111111
Q ss_pred -hhHHhhhhccEEEEecCCCCCCChH-HHHHHHHHhcCCc-EEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 204 -DFFFNDFVHDVLIVWGDQDQIFPLK-MATELKELLGKKA-RLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 204 -~~~~~~~~~p~l~i~g~~D~~~~~~-~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.....++..|+++++|+.|.+.+.. ....+.+.+ ++. +.++++++||+.+.|+|+++.+.+.+|+++.
T Consensus 250 ~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~v-p~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 250 APWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDV-PRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccccccccccceEEEEecCcccccchhHHHHHHHhh-ccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 3344556669999999999999876 344444445 444 7888999999999999999999999999863
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=215.96 Aligned_cols=241 Identities=19% Similarity=0.298 Sum_probs=167.2
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH-HHHhhc----CCCeEEeecCCCCCCCCCCC
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK-QVQFFA----PHFNVYVPDLIFFGHSTTRS 99 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~-~~~~l~----~~~~v~~~d~~g~g~s~~~~ 99 (273)
....++.+ +|.+++|...+++. .+.+|+|||+||++++. ..|.. +.+.|. ++|+|+++|+||||.|+.+.
T Consensus 176 ~~~~~~~~-~~~~l~~~~~gp~~---~~~k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~ 250 (481)
T PLN03087 176 FCTSWLSS-SNESLFVHVQQPKD---NKAKEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA 250 (481)
T ss_pred eeeeeEee-CCeEEEEEEecCCC---CCCCCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC
Confidence 34555666 67899999987321 23468999999999998 88874 445554 46999999999999998653
Q ss_pred -ccccHHHHHHHHH-HHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH---HHhhhhhh--
Q 024042 100 -IQRTELFQAASLG-KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE---ALVKRANL-- 172 (273)
Q Consensus 100 -~~~~~~~~~~~~~-~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~---~~~~~~~~-- 172 (273)
..++.+++++++. .+++.++.++++++||||||.+++.++.++|++++++|+++++......... ........
T Consensus 251 ~~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (481)
T PLN03087 251 DSLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRR 330 (481)
T ss_pred CCcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccc
Confidence 3478888899984 7899999999999999999999999999999999999999976543221110 00000000
Q ss_pred ---------------hhhhhcc---CCCChH---H---------HHHHhhhhh----------------ccCC---CCCh
Q 024042 173 ---------------ERIDHLM---LPESAS---Q---------LRTLTGLAV----------------SKNL---DIVP 203 (273)
Q Consensus 173 ---------------~~~~~~~---~~~~~~---~---------~~~~~~~~~----------------~~~~---~~~~ 203 (273)
....... ...... . ......... .... ....
T Consensus 331 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l 410 (481)
T PLN03087 331 VWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYL 410 (481)
T ss_pred cCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHH
Confidence 0000000 000000 0 000000000 0000 0000
Q ss_pred hhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc-CChhhHHHHHHHHhcc
Q 024042 204 DFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI-ENPGLFNSIVKNFLRG 271 (273)
Q Consensus 204 ~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 271 (273)
.....++..|+|+++|++|.++|++..+.+++.+ +++++++++++||+.+. ++|+++++.|.+|...
T Consensus 411 ~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i-P~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 411 DHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV-PRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC-CCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 1122357789999999999999999999999999 99999999999999885 9999999999999865
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=215.00 Aligned_cols=244 Identities=14% Similarity=0.124 Sum_probs=166.4
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc-cc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ-RT 103 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~-~~ 103 (273)
+...+..++|.+++|..++++ ....+++|||+||++++....|..++..|++. |+|+++|+||||.|...... .+
T Consensus 62 ~~~~~~~~~g~~l~~~~~~p~---~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~ 138 (349)
T PLN02385 62 EESYEVNSRGVEIFSKSWLPE---NSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPS 138 (349)
T ss_pred eeeeEEcCCCCEEEEEEEecC---CCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCC
Confidence 344555669999999888632 22457899999999887623468888888865 99999999999999865332 47
Q ss_pred HHHHHHHHHHHHHHhCC------ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc--hH---HHhhhhhh
Q 024042 104 ELFQAASLGKLLEKIGV------ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD--NE---ALVKRANL 172 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~~~------~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~--~~---~~~~~~~~ 172 (273)
.+++++++.++++.+.. .+++|+||||||.+|+.++.++|++++++|+++|........ .. ........
T Consensus 139 ~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~ 218 (349)
T PLN02385 139 FDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLAN 218 (349)
T ss_pred HHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHH
Confidence 88889999988887743 379999999999999999999999999999999865432111 00 00000000
Q ss_pred --hh--------hhhccCCCC-hHHHHHHhhhhhccCCC-----------CChhhHHhhhhccEEEEecCCCCCCChHHH
Q 024042 173 --ER--------IDHLMLPES-ASQLRTLTGLAVSKNLD-----------IVPDFFFNDFVHDVLIVWGDQDQIFPLKMA 230 (273)
Q Consensus 173 --~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~ 230 (273)
.. ......... ...........+..... ......+.++..|+|+++|++|.++|.+.+
T Consensus 219 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~ 298 (349)
T PLN02385 219 LLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVS 298 (349)
T ss_pred HCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHH
Confidence 00 000000000 00000000000000000 000112345667999999999999999999
Q ss_pred HHHHHHhc-CCcEEEEeCCCCCCcCcCChhh----HHHHHHHHhccc
Q 024042 231 TELKELLG-KKARLEIIENTSHVPQIENPGL----FNSIVKNFLRGS 272 (273)
Q Consensus 231 ~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~~~ 272 (273)
+.+.+.+. +++++++++++||.++.++|++ +.+.|.+||+++
T Consensus 299 ~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 299 KFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred HHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHh
Confidence 99998873 5689999999999999888876 788899999875
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=205.82 Aligned_cols=214 Identities=16% Similarity=0.155 Sum_probs=152.9
Q ss_pred eEEEEcCCCCchhHhHHHHHHhhcC-CCeEEeecCCCCCCCCCCCc-cccHHHHHHHHHHHHHHhCC-ccEEEEEeccch
Q 024042 56 SLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHSTTRSI-QRTELFQAASLGKLLEKIGV-ERFSVVGTSYGG 132 (273)
Q Consensus 56 ~vi~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg 132 (273)
.|||+||++.+. ..|+.+++.|.+ +|+|+++|+||||.|..+.. .++.+++++++.++++.++. ++++++||||||
T Consensus 5 ~vvllHG~~~~~-~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGA-WCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCc-CcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 599999999888 899999999954 59999999999999975543 56899999999999999987 599999999999
Q ss_pred HHHHHHHHhCCcccceEEEecCCCCCCCcc-hHHHhh-hhhhhhhhhc-----c-CCC-----ChHHHHH----------
Q 024042 133 FVAYHMARMWPERVEKVVIASSGVNMKRGD-NEALVK-RANLERIDHL-----M-LPE-----SASQLRT---------- 189 (273)
Q Consensus 133 ~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~-----~-~~~-----~~~~~~~---------- 189 (273)
.+++.++.++|++|+++|++++........ ...... .......... . .+. .......
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLED 163 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHH
Confidence 999999999999999999999863211110 010100 0000000000 0 000 0000000
Q ss_pred --Hhhhhhcc-CCCC--Ch---hhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhH
Q 024042 190 --LTGLAVSK-NLDI--VP---DFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLF 261 (273)
Q Consensus 190 --~~~~~~~~-~~~~--~~---~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 261 (273)
........ .... .. ......+..|+++++|++|..+|++..+.+.+.+ +++++++++++||+++.|+|+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~-~~a~~~~i~~~GH~~~~e~p~~v 242 (255)
T PLN02965 164 YTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW-PPAQTYVLEDSDHSAFFSVPTTL 242 (255)
T ss_pred HHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC-CcceEEEecCCCCchhhcCHHHH
Confidence 00000000 0000 00 0122346679999999999999999999999999 89999999999999999999999
Q ss_pred HHHHHHHhcc
Q 024042 262 NSIVKNFLRG 271 (273)
Q Consensus 262 ~~~i~~fl~~ 271 (273)
.+.|.+|+++
T Consensus 243 ~~~l~~~~~~ 252 (255)
T PLN02965 243 FQYLLQAVSS 252 (255)
T ss_pred HHHHHHHHHH
Confidence 9999999864
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=207.23 Aligned_cols=220 Identities=21% Similarity=0.279 Sum_probs=152.4
Q ss_pred EEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH
Q 024042 38 LHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK 117 (273)
Q Consensus 38 l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~ 117 (273)
++|...| ++.|+|||+||++++. ..|..+.+.|.+.|+|+++|+||||.|.... .++.++.++++. +
T Consensus 4 ~~y~~~G-------~g~~~ivllHG~~~~~-~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~----~ 70 (256)
T PRK10349 4 IWWQTKG-------QGNVHLVLLHGWGLNA-EVWRCIDEELSSHFTLHLVDLPGFGRSRGFG-ALSLADMAEAVL----Q 70 (256)
T ss_pred cchhhcC-------CCCCeEEEECCCCCCh-hHHHHHHHHHhcCCEEEEecCCCCCCCCCCC-CCCHHHHHHHHH----h
Confidence 5566654 2345799999999999 9999999999888999999999999998543 456666665544 3
Q ss_pred hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc-----chHHHhhhh----h---hhhhhhc-----cC
Q 024042 118 IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG-----DNEALVKRA----N---LERIDHL-----ML 180 (273)
Q Consensus 118 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~-----~~~~~~~~~----~---~~~~~~~-----~~ 180 (273)
+..++++++||||||.+|+.+|.++|++++++|++++....... ......... . ....... ..
T Consensus 71 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T PRK10349 71 QAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMG 150 (256)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHcc
Confidence 56689999999999999999999999999999999875432111 000000000 0 0000000 00
Q ss_pred CCC-hHHHHHHhhhhhccC--------------CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEE
Q 024042 181 PES-ASQLRTLTGLAVSKN--------------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEI 245 (273)
Q Consensus 181 ~~~-~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (273)
... ............... ........+.++..|+|+++|++|.++|.+..+.+.+.+ +++++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i-~~~~~~~ 229 (256)
T PRK10349 151 TETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYI 229 (256)
T ss_pred CchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhC-CCCeEEE
Confidence 000 000110000000000 001112345566779999999999999999999999999 9999999
Q ss_pred eCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 246 IENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 246 ~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
++++||+++.|+|+++.+.+.+|-++
T Consensus 230 i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 230 FAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred eCCCCCCccccCHHHHHHHHHHHhcc
Confidence 99999999999999999999998654
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=208.21 Aligned_cols=227 Identities=22% Similarity=0.340 Sum_probs=163.4
Q ss_pred EEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC-ccccHHHHHHHHHHHHH
Q 024042 38 LHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS-IQRTELFQAASLGKLLE 116 (273)
Q Consensus 38 l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~~~~ 116 (273)
++|..++ .+..+.|+||++||++++. ..|...++.|.++|+|+++|+||+|.|.... ..++.++.++++.++++
T Consensus 1 ~~~~~~~----~~~~~~~~iv~lhG~~~~~-~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~ 75 (257)
T TIGR03611 1 MHYELHG----PPDADAPVVVLSSGLGGSG-SYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLD 75 (257)
T ss_pred CEEEEec----CCCCCCCEEEEEcCCCcch-hHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 3566665 3335678999999999998 8999999999888999999999999998643 34688999999999999
Q ss_pred HhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhh------hhhhhhh----hccCC-----
Q 024042 117 KIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR------ANLERID----HLMLP----- 181 (273)
Q Consensus 117 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~------~~~~~~~----~~~~~----- 181 (273)
.++.++++++|||+||.+|+.++.++|++++++|++++............... ....... ....+
T Consensus 76 ~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
T TIGR03611 76 ALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWIS 155 (257)
T ss_pred HhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhh
Confidence 99999999999999999999999999999999999987554322111000000 0000000 00000
Q ss_pred CChHHHH-H-------------HhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeC
Q 024042 182 ESASQLR-T-------------LTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIE 247 (273)
Q Consensus 182 ~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (273)
....... . ..... .............++..|+++++|++|.++|.+.++.+.+.+ ++.+++.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~ 233 (257)
T TIGR03611 156 ENAARLAADEAHALAHFPGKANVLRRI-NALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAAL-PNAQLKLLP 233 (257)
T ss_pred ccchhhhhhhhhcccccCccHHHHHHH-HHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhc-CCceEEEEC
Confidence 0000000 0 00000 000000112234456679999999999999999999999998 889999999
Q ss_pred CCCCCcCcCChhhHHHHHHHHhcc
Q 024042 248 NTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 248 ~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
++||+.+.++|+++.+.|.+||++
T Consensus 234 ~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 234 YGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred CCCCCccccCHHHHHHHHHHHhcC
Confidence 999999999999999999999964
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=206.78 Aligned_cols=227 Identities=22% Similarity=0.351 Sum_probs=155.8
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHH---HHhhc-CCCeEEeecCCCCCCCCCCCccc-cHHHHHH
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQ---VQFFA-PHFNVYVPDLIFFGHSTTRSIQR-TELFQAA 109 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~---~~~l~-~~~~v~~~d~~g~g~s~~~~~~~-~~~~~~~ 109 (273)
|.+++|...+ +.|+|||+||++.+. ..|... +..+. ++|+|+++|+||||.|+...... .....++
T Consensus 19 ~~~~~y~~~g--------~~~~ivllHG~~~~~-~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 89 (282)
T TIGR03343 19 NFRIHYNEAG--------NGEAVIMLHGGGPGA-GGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNAR 89 (282)
T ss_pred ceeEEEEecC--------CCCeEEEECCCCCch-hhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHH
Confidence 4568888764 457899999998877 566532 33444 45999999999999998653221 2224688
Q ss_pred HHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc---ch----HHHhhhhh---hhhhhhc-
Q 024042 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG---DN----EALVKRAN---LERIDHL- 178 (273)
Q Consensus 110 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~---~~----~~~~~~~~---~~~~~~~- 178 (273)
++.++++.++.++++++||||||.+++.++.++|++++++|++++....... .. ........ .......
T Consensus 90 ~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (282)
T TIGR03343 90 AVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQML 169 (282)
T ss_pred HHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHH
Confidence 8999999999999999999999999999999999999999999875321110 00 00000000 0000000
Q ss_pred ----cCC-C-ChHHH--------------HHHhhhhh-ccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh
Q 024042 179 ----MLP-E-SASQL--------------RTLTGLAV-SKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL 237 (273)
Q Consensus 179 ----~~~-~-~~~~~--------------~~~~~~~~-~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~ 237 (273)
..+ . ..... ........ .....+.....+.++.+|+|+++|++|.+++.+.++.+++.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~ 249 (282)
T TIGR03343 170 NVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNM 249 (282)
T ss_pred hhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhC
Confidence 000 0 00000 00000000 000111223346677889999999999999999999999999
Q ss_pred cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 238 GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 238 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+++++++++++||+.+.|+|+++.+.|.+||+.
T Consensus 250 -~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 250 -PDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred -CCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 899999999999999999999999999999963
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=203.61 Aligned_cols=238 Identities=13% Similarity=0.082 Sum_probs=160.1
Q ss_pred EecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-cccHHHH
Q 024042 30 IDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QRTELFQ 107 (273)
Q Consensus 30 ~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~~~~~~ 107 (273)
+..+||.+++|..+.| ....++.|+++||++++. ..|..+++.|.+. |+|+++|+||||.|..... ..+....
T Consensus 5 ~~~~~g~~l~~~~~~~----~~~~~~~v~llHG~~~~~-~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~ 79 (276)
T PHA02857 5 MFNLDNDYIYCKYWKP----ITYPKALVFISHGAGEHS-GRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVY 79 (276)
T ss_pred eecCCCCEEEEEeccC----CCCCCEEEEEeCCCcccc-chHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHH
Confidence 4445999999988752 234556777789999988 9999999999876 9999999999999975432 1345555
Q ss_pred HHHHHHHHHHh----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhh-hhcc---
Q 024042 108 AASLGKLLEKI----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERI-DHLM--- 179 (273)
Q Consensus 108 ~~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 179 (273)
++++.+.++.+ ..++++++|||+||.+|+.++.++|++++++|+++|..................... ....
T Consensus 80 ~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (276)
T PHA02857 80 VRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGK 159 (276)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCC
Confidence 66666666544 336899999999999999999999999999999998655321111110000000000 0000
Q ss_pred -----CCCChHHHHHHhhhhhccCCCC-------------ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCc
Q 024042 180 -----LPESASQLRTLTGLAVSKNLDI-------------VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKA 241 (273)
Q Consensus 180 -----~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 241 (273)
...................... .....+.++..|+|+++|++|.++|++.++.+.+.+.++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~ 239 (276)
T PHA02857 160 LCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNR 239 (276)
T ss_pred CCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCc
Confidence 0000000000000000000000 0012234566799999999999999999999998874578
Q ss_pred EEEEeCCCCCCcCcCCh---hhHHHHHHHHhccc
Q 024042 242 RLEIIENTSHVPQIENP---GLFNSIVKNFLRGS 272 (273)
Q Consensus 242 ~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 272 (273)
++.+++++||.++.|++ +++.+.+.+||+++
T Consensus 240 ~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 240 EIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred eEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999999998865 57889999999764
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=204.38 Aligned_cols=226 Identities=24% Similarity=0.350 Sum_probs=163.1
Q ss_pred EEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH
Q 024042 38 LHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK 117 (273)
Q Consensus 38 l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~ 117 (273)
++|...+ .++++|+||++||++.+. ..|..+++.|.++|+|+++|+||+|.|..+...++.++.++++.++++.
T Consensus 2 ~~~~~~g-----~~~~~~~li~~hg~~~~~-~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~ 75 (251)
T TIGR02427 2 LHYRLDG-----AADGAPVLVFINSLGTDL-RMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDH 75 (251)
T ss_pred ceEEeec-----CCCCCCeEEEEcCcccch-hhHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 5666654 123678999999999998 8999999999888999999999999998766667899999999999999
Q ss_pred hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc-hHHHhhhh---hh---------hhhhhccCCCCh
Q 024042 118 IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD-NEALVKRA---NL---------ERIDHLMLPESA 184 (273)
Q Consensus 118 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-~~~~~~~~---~~---------~~~~~~~~~~~~ 184 (273)
++.++++++|||+||.+++.+|.++|+++++++++++........ ........ .. ..+.........
T Consensus 76 ~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (251)
T TIGR02427 76 LGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHP 155 (251)
T ss_pred hCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCCh
Confidence 998999999999999999999999999999999998764432211 00000000 00 000000000011
Q ss_pred HHHHHHhhhhh-----------ccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCc
Q 024042 185 SQLRTLTGLAV-----------SKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVP 253 (273)
Q Consensus 185 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 253 (273)
........... .............++..|+++++|++|.++|.+..+.+.+.+ ++.+++.++++||+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~ 234 (251)
T TIGR02427 156 ARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLV-PGARFAEIRGAGHIP 234 (251)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhC-CCceEEEECCCCCcc
Confidence 11100000000 000011112234556679999999999999999999999988 889999999999999
Q ss_pred CcCChhhHHHHHHHHhc
Q 024042 254 QIENPGLFNSIVKNFLR 270 (273)
Q Consensus 254 ~~~~~~~~~~~i~~fl~ 270 (273)
+.++|+++.+.+.+|++
T Consensus 235 ~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 235 CVEQPEAFNAALRDFLR 251 (251)
T ss_pred cccChHHHHHHHHHHhC
Confidence 99999999999999984
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-32 Score=202.53 Aligned_cols=230 Identities=14% Similarity=0.166 Sum_probs=162.4
Q ss_pred eEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHH
Q 024042 37 TLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLE 116 (273)
Q Consensus 37 ~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~ 116 (273)
+++|..+++ ....++|+|||+||++++. ..|..+...|.++|+|+++|+||||.|... ..++.++.++++.++++
T Consensus 2 ~~~~~~~~~---~~~~~~~~iv~lhG~~~~~-~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~~l~ 76 (255)
T PRK10673 2 KLNIRAQTA---QNPHNNSPIVLVHGLFGSL-DNLGVLARDLVNDHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLDTLD 76 (255)
T ss_pred cceeeeccC---CCCCCCCCEEEECCCCCch-hHHHHHHHHHhhCCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHH
Confidence 345555432 2345678999999999998 899999999988899999999999999864 34788999999999999
Q ss_pred HhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc-hHHHhhhhhhh-h--------hhhccC-CCChH
Q 024042 117 KIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD-NEALVKRANLE-R--------IDHLML-PESAS 185 (273)
Q Consensus 117 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-~~~~~~~~~~~-~--------~~~~~~-~~~~~ 185 (273)
.++.++++++||||||.+|+.++.++|++|+++|++++........ ........... . ...... .....
T Consensus 77 ~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
T PRK10673 77 ALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEE 156 (255)
T ss_pred HcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCH
Confidence 9998999999999999999999999999999999997543221110 00000000000 0 000000 00000
Q ss_pred HHHHHhhhhhccC-CCCC------------hhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCC
Q 024042 186 QLRTLTGLAVSKN-LDIV------------PDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHV 252 (273)
Q Consensus 186 ~~~~~~~~~~~~~-~~~~------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 252 (273)
.........+... .... .......+..|+|+++|++|..++.+..+.+.+.+ ++.++.+++++||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~ 235 (255)
T PRK10673 157 GVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF-PQARAHVIAGAGHW 235 (255)
T ss_pred HHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC-CCcEEEEeCCCCCe
Confidence 0000000000000 0000 00112344569999999999999999999999998 89999999999999
Q ss_pred cCcCChhhHHHHHHHHhccc
Q 024042 253 PQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 253 ~~~~~~~~~~~~i~~fl~~~ 272 (273)
.+.++|+++.+.+.+||+++
T Consensus 236 ~~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 236 VHAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred eeccCHHHHHHHHHHHHhcC
Confidence 99999999999999999864
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=208.59 Aligned_cols=231 Identities=16% Similarity=0.246 Sum_probs=166.9
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc----cccHHHH
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI----QRTELFQ 107 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~----~~~~~~~ 107 (273)
..+|.+++|...| +.++|+|||+||++.+. ..|+.+++.|+++|+|+++|+||||.|+.+.. .++.+++
T Consensus 111 ~~~~~~~~y~~~G------~~~~~~ivllHG~~~~~-~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~ 183 (383)
T PLN03084 111 SSDLFRWFCVESG------SNNNPPVLLIHGFPSQA-YSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEY 183 (383)
T ss_pred cCCceEEEEEecC------CCCCCeEEEECCCCCCH-HHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHH
Confidence 4589999999886 44578999999999998 99999999998889999999999999987643 4789999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc-chHHHhhh--h------h---hhhh
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG-DNEALVKR--A------N---LERI 175 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~-~~~~~~~~--~------~---~~~~ 175 (273)
++++.+++++++.++++|+|||+||.+++.++.++|++++++|+++++...... ........ . . ....
T Consensus 184 a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~ 263 (383)
T PLN03084 184 VSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRAS 263 (383)
T ss_pred HHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHH
Confidence 999999999999999999999999999999999999999999999987542210 01000000 0 0 0000
Q ss_pred hhccC---C--CChHHHHHHh-------------h---hhhccCCCCChhhHH-----hhhhccEEEEecCCCCCCChHH
Q 024042 176 DHLML---P--ESASQLRTLT-------------G---LAVSKNLDIVPDFFF-----NDFVHDVLIVWGDQDQIFPLKM 229 (273)
Q Consensus 176 ~~~~~---~--~~~~~~~~~~-------------~---~~~~~~~~~~~~~~~-----~~~~~p~l~i~g~~D~~~~~~~ 229 (273)
...+. + .......... . ............... .++..|+++++|+.|.+++.+.
T Consensus 264 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~ 343 (383)
T PLN03084 264 DKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDG 343 (383)
T ss_pred hhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHH
Confidence 00000 0 0000000000 0 000000000000011 2356799999999999999998
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 230 ATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+.+.+. .+.++++++++||+++.|+|+++++.|.+||++
T Consensus 344 ~~~~a~~--~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 344 VEDFCKS--SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred HHHHHHh--cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 8888776 378999999999999999999999999999864
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-32 Score=210.48 Aligned_cols=230 Identities=18% Similarity=0.233 Sum_probs=156.8
Q ss_pred CcceEEeecCCccCCCCCCC-------CCeEEEEcCCCCchhHhHH--HHHHhh--------cCCCeEEeecCCCCCCCC
Q 024042 34 DETTLHFWGPKLEDDHKTLK-------KPSLVLIHGFGPEAIWQWR--KQVQFF--------APHFNVYVPDLIFFGHST 96 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~-------~~~vi~~hG~~~~~~~~~~--~~~~~l--------~~~~~v~~~d~~g~g~s~ 96 (273)
+|.+++|...| .++ +|+|||+||++++. ..|. .+.+.| +++|+|+++|+||||.|+
T Consensus 48 ~g~~i~y~~~G------~~~~~~~~~~gpplvllHG~~~~~-~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~ 120 (360)
T PRK06489 48 PELRLHYTTLG------TPHRNADGEIDNAVLVLHGTGGSG-KSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSS 120 (360)
T ss_pred CCceEEEEecC------CCCcccccCCCCeEEEeCCCCCch-hhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCC
Confidence 67888999887 222 68999999999887 6664 444443 566999999999999998
Q ss_pred CCCc-------cccHHHHHHHHHHHH-HHhCCccEE-EEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH---
Q 024042 97 TRSI-------QRTELFQAASLGKLL-EKIGVERFS-VVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE--- 164 (273)
Q Consensus 97 ~~~~-------~~~~~~~~~~~~~~~-~~~~~~~i~-l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~--- 164 (273)
.+.. .++.++.++++.+++ ++++.++++ ++||||||.+|+.++.++|++++++|++++..........
T Consensus 121 ~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~ 200 (360)
T PRK06489 121 KPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWR 200 (360)
T ss_pred CCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHH
Confidence 6543 367888888887754 888988885 8999999999999999999999999999875321110000
Q ss_pred HH-hhhhhhh-------------h------hhh----------ccCCCChH----HHHHHhhhh-----------hccCC
Q 024042 165 AL-VKRANLE-------------R------IDH----------LMLPESAS----QLRTLTGLA-----------VSKNL 199 (273)
Q Consensus 165 ~~-~~~~~~~-------------~------~~~----------~~~~~~~~----~~~~~~~~~-----------~~~~~ 199 (273)
.. ....... . ... ........ ......... .....
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (360)
T PRK06489 201 RMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSR 280 (360)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhh
Confidence 00 0000000 0 000 00000000 000000000 00000
Q ss_pred CCChhhHHhhhhccEEEEecCCCCCCChHHH--HHHHHHhcCCcEEEEeCCC----CCCcCcCChhhHHHHHHHHhccc
Q 024042 200 DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMA--TELKELLGKKARLEIIENT----SHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 200 ~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.......+.++.+|+|+|+|++|.++|.+.. +.+.+.+ ++.++++++++ ||.++ ++|+++.+.|.+||++.
T Consensus 281 ~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i-p~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 281 DYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV-KHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred ccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC-cCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhc
Confidence 1122334567778999999999999998865 7888888 99999999986 99987 89999999999999753
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-31 Score=203.48 Aligned_cols=238 Identities=11% Similarity=0.060 Sum_probs=162.5
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc------c
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI------Q 101 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~------~ 101 (273)
.+...+|.+++|..+++ ..++++||++||++.+. ..|..++..+.+. |+|+++|+||||.|..... .
T Consensus 34 ~~~~~~g~~l~~~~~~~-----~~~~~~vll~HG~~~~~-~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 107 (330)
T PRK10749 34 EFTGVDDIPIRFVRFRA-----PHHDRVVVICPGRIESY-VKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHV 107 (330)
T ss_pred EEEcCCCCEEEEEEccC-----CCCCcEEEEECCccchH-HHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCcc
Confidence 34444999999999862 24567999999999887 7888888777655 9999999999999975422 1
Q ss_pred ccHHHHHHHHHHHHHHh----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHH----hhhhh-h
Q 024042 102 RTELFQAASLGKLLEKI----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL----VKRAN-L 172 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~----~~~~~-~ 172 (273)
.+.+++++++..+++.+ +..+++++||||||.+++.++.++|++++++|+++|............ ..... .
T Consensus 108 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 187 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGH 187 (330)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHh
Confidence 47888999999999876 557999999999999999999999999999999998754321111110 00000 0
Q ss_pred hhh--------hhcc--------CCCChHHHHHHhhhhhccCCC----CC----h---------hhHHhhhhccEEEEec
Q 024042 173 ERI--------DHLM--------LPESASQLRTLTGLAVSKNLD----IV----P---------DFFFNDFVHDVLIVWG 219 (273)
Q Consensus 173 ~~~--------~~~~--------~~~~~~~~~~~~~~~~~~~~~----~~----~---------~~~~~~~~~p~l~i~g 219 (273)
... .... ..................... .. . .....++..|+|+++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G 267 (330)
T PRK10749 188 PRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQA 267 (330)
T ss_pred cCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Confidence 000 0000 001111111111111101000 00 0 0112345569999999
Q ss_pred CCCCCCChHHHHHHHHHhc------CCcEEEEeCCCCCCcCcCCh---hhHHHHHHHHhccc
Q 024042 220 DQDQIFPLKMATELKELLG------KKARLEIIENTSHVPQIENP---GLFNSIVKNFLRGS 272 (273)
Q Consensus 220 ~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 272 (273)
++|.+++++.++.+++.+. +++++++++++||.++.|.+ +.+.+.|.+||+++
T Consensus 268 ~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 268 EEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 9999999999998888761 35689999999999988765 57888999999864
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=206.86 Aligned_cols=245 Identities=13% Similarity=0.167 Sum_probs=164.5
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-cc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QR 102 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~ 102 (273)
.+...++..||.+++|+.+.+.. ..+.+++|||+||++.+....|..+...|.+. |+|+++|+||||.|..... ..
T Consensus 32 ~~~~~~~~~dg~~l~~~~~~~~~--~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~ 109 (330)
T PLN02298 32 GSKSFFTSPRGLSLFTRSWLPSS--SSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVP 109 (330)
T ss_pred cccceEEcCCCCEEEEEEEecCC--CCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCC
Confidence 34567777899999998775211 12356789999999866424567777778765 9999999999999975433 24
Q ss_pred cHHHHHHHHHHHHHHhCC------ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc--h---HHHhhhhh
Q 024042 103 TELFQAASLGKLLEKIGV------ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD--N---EALVKRAN 171 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~------~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~--~---~~~~~~~~ 171 (273)
+.+.+++|+.++++.+.. .+++|+||||||.+|+.++.++|++++++|+++|........ . ........
T Consensus 110 ~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (330)
T PLN02298 110 NVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVA 189 (330)
T ss_pred CHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHH
Confidence 777889999999987742 479999999999999999999999999999999875433211 0 00000000
Q ss_pred hhhhhhcc-------CCCC--hHHHHHHhh---hhhccCCC-----------CChhhHHhhhhccEEEEecCCCCCCChH
Q 024042 172 LERIDHLM-------LPES--ASQLRTLTG---LAVSKNLD-----------IVPDFFFNDFVHDVLIVWGDQDQIFPLK 228 (273)
Q Consensus 172 ~~~~~~~~-------~~~~--~~~~~~~~~---~~~~~~~~-----------~~~~~~~~~~~~p~l~i~g~~D~~~~~~ 228 (273)
....... .... ......... ..+..... ......+.++..|+|+++|++|.++|++
T Consensus 190 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~ 268 (330)
T PLN02298 190 -RFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPD 268 (330)
T ss_pred -HHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHH
Confidence 0000000 0000 000000000 00000000 0011223456679999999999999999
Q ss_pred HHHHHHHHhc-CCcEEEEeCCCCCCcCcCChh----hHHHHHHHHhccc
Q 024042 229 MATELKELLG-KKARLEIIENTSHVPQIENPG----LFNSIVKNFLRGS 272 (273)
Q Consensus 229 ~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~~ 272 (273)
.++.+++.+. ++++++++++++|..+.++|+ .+.+.+.+||++.
T Consensus 269 ~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 269 VSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred HHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 9999988873 578999999999999988775 4677888898765
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-30 Score=191.20 Aligned_cols=244 Identities=24% Similarity=0.316 Sum_probs=168.3
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcc-
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ- 101 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~- 101 (273)
.....+.+.++++..+...... .....++++|++||+|.+. ..|-.-.+.|++.+.|+++|++|+|.|+++.-.
T Consensus 63 v~~~~~~v~i~~~~~iw~~~~~----~~~~~~~plVliHGyGAg~-g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~ 137 (365)
T KOG4409|consen 63 VPYSKKYVRIPNGIEIWTITVS----NESANKTPLVLIHGYGAGL-GLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSI 137 (365)
T ss_pred CCcceeeeecCCCceeEEEeec----ccccCCCcEEEEeccchhH-HHHHHhhhhhhhcCceEEecccCCCCCCCCCCCC
Confidence 3456778888777776666554 3346788999999999998 889888999999999999999999999987543
Q ss_pred ---ccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc-c-------hHHHhhh-
Q 024042 102 ---RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG-D-------NEALVKR- 169 (273)
Q Consensus 102 ---~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~-~-------~~~~~~~- 169 (273)
.....+++.+.++....++++.+|+|||+||++|..+|.+||++|+.+|+++|+...... . .......
T Consensus 138 d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~ 217 (365)
T KOG4409|consen 138 DPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKAL 217 (365)
T ss_pred CcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhh
Confidence 355678899999999999999999999999999999999999999999999998765532 1 0001100
Q ss_pred ------hhhhhhhhccCCCChHHHHHHhhhhhccCC---------------------------------CCChhhH---H
Q 024042 170 ------ANLERIDHLMLPESASQLRTLTGLAVSKNL---------------------------------DIVPDFF---F 207 (273)
Q Consensus 170 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~---~ 207 (273)
.+.....+.+.+..+.....+....+.... .+..... +
T Consensus 218 ~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~ 297 (365)
T KOG4409|consen 218 FLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRL 297 (365)
T ss_pred hhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHH
Confidence 000001111111111111111111110000 0111111 1
Q ss_pred hhhh--ccEEEEecCCCCCCChHHHHHHHHHh-cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 208 NDFV--HDVLIVWGDQDQIFPLKMATELKELL-GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 208 ~~~~--~p~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
..+. +|+++|+|++|=+ ......++.+.+ ...++.+++|++||....++|+.+.+.+.+++++.
T Consensus 298 ~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 298 RELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred HhhccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 1222 3999999999854 445555555543 36699999999999999999999999999998753
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.8e-30 Score=191.18 Aligned_cols=208 Identities=18% Similarity=0.219 Sum_probs=144.0
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchH
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGF 133 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~ 133 (273)
+|+|||+||++++. ..|..+.+.|+ +|+|+++|+||||.|..+.. .+.+++++++.+++++++.++++++||||||.
T Consensus 2 ~p~vvllHG~~~~~-~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (242)
T PRK11126 2 LPWLVFLHGLLGSG-QDWQPVGEALP-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSYNILPYWLVGYSLGGR 78 (242)
T ss_pred CCEEEEECCCCCCh-HHHHHHHHHcC-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHcCCCCeEEEEECHHHH
Confidence 57899999999999 99999999884 69999999999999986543 48889999999999999999999999999999
Q ss_pred HHHHHHHhCCcc-cceEEEecCCCCCCCcchH--HHh------hhhh----hhhhhhc-----cCCCChHHHHHHhhh--
Q 024042 134 VAYHMARMWPER-VEKVVIASSGVNMKRGDNE--ALV------KRAN----LERIDHL-----MLPESASQLRTLTGL-- 193 (273)
Q Consensus 134 ~a~~~a~~~~~~-v~~~v~~~~~~~~~~~~~~--~~~------~~~~----~~~~~~~-----~~~~~~~~~~~~~~~-- 193 (273)
+|+.++.++|+. +++++++++.......... ... .... ....... ...............
T Consensus 79 va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (242)
T PRK11126 79 IAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLVAKRS 158 (242)
T ss_pred HHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHHHhcc
Confidence 999999998654 9999998876533221100 000 0000 0000000 000000000000000
Q ss_pred ---------hhc-c--CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhH
Q 024042 194 ---------AVS-K--NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLF 261 (273)
Q Consensus 194 ---------~~~-~--~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 261 (273)
... . .........+.++.+|+++++|++|..+. .+.+. .+++++.++++||+++.++|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~--~~~~~~~i~~~gH~~~~e~p~~~ 231 (242)
T PRK11126 159 NNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ--LALPLHVIPNAGHNAHRENPAAF 231 (242)
T ss_pred cCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH--hcCeEEEeCCCCCchhhhChHHH
Confidence 000 0 00001123455677899999999998542 23332 37899999999999999999999
Q ss_pred HHHHHHHhcc
Q 024042 262 NSIVKNFLRG 271 (273)
Q Consensus 262 ~~~i~~fl~~ 271 (273)
.+.|.+|+++
T Consensus 232 ~~~i~~fl~~ 241 (242)
T PRK11126 232 AASLAQILRL 241 (242)
T ss_pred HHHHHHHHhh
Confidence 9999999975
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-30 Score=196.51 Aligned_cols=249 Identities=27% Similarity=0.370 Sum_probs=175.7
Q ss_pred hCCCceeEEecCCcc-eEEeecCCcc---CCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC--CeEEeecCCCCCC-
Q 024042 22 SAGLSSQTIDIDDET-TLHFWGPKLE---DDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH--FNVYVPDLIFFGH- 94 (273)
Q Consensus 22 ~~~~~~~~~~~~~g~-~l~~~~~~~~---~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~- 94 (273)
..++....++++.|. ++....++.. ..+.+..+++||++|||+++. ..|+.....|.+. +.|+++|++|+|.
T Consensus 22 ~~~~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~-~~w~~~~~~L~~~~~~~v~aiDl~G~g~~ 100 (326)
T KOG1454|consen 22 FVTLRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASS-FSWRRVVPLLSKAKGLRVLAIDLPGHGYS 100 (326)
T ss_pred eccccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCc-ccHhhhccccccccceEEEEEecCCCCcC
Confidence 345677788887773 4444444322 011125789999999999988 9999999999988 8999999999994
Q ss_pred CCCCCc-cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEE---EecCCCCCCCcchHHHhhhh
Q 024042 95 STTRSI-QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVV---IASSGVNMKRGDNEALVKRA 170 (273)
Q Consensus 95 s~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v---~~~~~~~~~~~~~~~~~~~~ 170 (273)
|..+.. .++..+.++.+..+......++++++|||+||.+|..+|+.+|+.|++++ ++++................
T Consensus 101 s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~ 180 (326)
T KOG1454|consen 101 SPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLL 180 (326)
T ss_pred CCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhh
Confidence 443333 37888999999999999988899999999999999999999999999999 66665554433211111111
Q ss_pred h----hhhhhhc-c--CC-----------------C---ChHHHHHHhh------------hhhccC-C--CCChhhHHh
Q 024042 171 N----LERIDHL-M--LP-----------------E---SASQLRTLTG------------LAVSKN-L--DIVPDFFFN 208 (273)
Q Consensus 171 ~----~~~~~~~-~--~~-----------------~---~~~~~~~~~~------------~~~~~~-~--~~~~~~~~~ 208 (273)
. ....... . .+ . .......... ..+... . +........
T Consensus 181 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (326)
T KOG1454|consen 181 DKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIK 260 (326)
T ss_pred hhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhc
Confidence 1 0000000 0 00 0 0000000000 000000 0 123333455
Q ss_pred hhh-ccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 209 DFV-HDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 209 ~~~-~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
++. +|+|+++|++|.++|.+.++.+.+.+ +++++++++++||.++.+.|+++++.|..|+++.
T Consensus 261 ~i~~~pvlii~G~~D~~~p~~~~~~~~~~~-pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 261 KIWKCPVLIIWGDKDQIVPLELAEELKKKL-PNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred cccCCceEEEEcCcCCccCHHHHHHHHhhC-CCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 565 79999999999999999999999999 9999999999999999999999999999999864
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=192.42 Aligned_cols=209 Identities=22% Similarity=0.292 Sum_probs=145.9
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchH
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGF 133 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~ 133 (273)
+|+|||+||++++. ..|..+.+.|.++|+|+++|+||+|.|... ...+.++.++++.+.+ .++++++||||||.
T Consensus 4 ~~~iv~~HG~~~~~-~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 4 NVHLVLIHGWGMNA-EVFRCLDEELSAHFTLHLVDLPGHGRSRGF-GPLSLADAAEAIAAQA----PDPAIWLGWSLGGL 77 (245)
T ss_pred CceEEEEcCCCCch-hhHHHHHHhhccCeEEEEecCCcCccCCCC-CCcCHHHHHHHHHHhC----CCCeEEEEEcHHHH
Confidence 47899999999998 899999999988899999999999998754 3356666666655432 37899999999999
Q ss_pred HHHHHHHhCCcccceEEEecCCCCCCCcc------hHHHhhh----hh------hhhhh--hccC-CCChHHHHHHhhhh
Q 024042 134 VAYHMARMWPERVEKVVIASSGVNMKRGD------NEALVKR----AN------LERID--HLML-PESASQLRTLTGLA 194 (273)
Q Consensus 134 ~a~~~a~~~~~~v~~~v~~~~~~~~~~~~------~~~~~~~----~~------~~~~~--~~~~-~~~~~~~~~~~~~~ 194 (273)
+++.++.++|++++++|++++........ ....... .. ...+. .... ..............
T Consensus 78 ~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (245)
T TIGR01738 78 VALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTL 157 (245)
T ss_pred HHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHHHHh
Confidence 99999999999999999998765332110 0000000 00 00000 0000 00000000000000
Q ss_pred --------------hccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhh
Q 024042 195 --------------VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGL 260 (273)
Q Consensus 195 --------------~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 260 (273)
............+.++..|+++++|++|.++|.+..+.+.+.+ +++++++++++||+++.++|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~ 236 (245)
T TIGR01738 158 LARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA-PHSELYIFAKAAHAPFLSHAEA 236 (245)
T ss_pred hccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC-CCCeEEEeCCCCCCccccCHHH
Confidence 0000011112334567779999999999999999999999888 8999999999999999999999
Q ss_pred HHHHHHHHh
Q 024042 261 FNSIVKNFL 269 (273)
Q Consensus 261 ~~~~i~~fl 269 (273)
+.+.|.+|+
T Consensus 237 ~~~~i~~fi 245 (245)
T TIGR01738 237 FCALLVAFK 245 (245)
T ss_pred HHHHHHhhC
Confidence 999999986
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=201.07 Aligned_cols=233 Identities=24% Similarity=0.331 Sum_probs=166.2
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHH
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
..+.. ++.+++|+..+ .+++++|||+||++++. ..|..+...|.+.|+|+++|+||||.|.......+..+.
T Consensus 112 ~~~~~-~~~~i~~~~~g------~~~~~~vl~~HG~~~~~-~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~ 183 (371)
T PRK14875 112 RKARI-GGRTVRYLRLG------EGDGTPVVLIHGFGGDL-NNWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDEL 183 (371)
T ss_pred CcceE-cCcEEEEeccc------CCCCCeEEEECCCCCcc-chHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHH
Confidence 44555 67788888775 34578999999999998 899999999988899999999999999766666789999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHH---Hhhhhh---h-hhhhhccC
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA---LVKRAN---L-ERIDHLML 180 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~---~~~~~~---~-~~~~~~~~ 180 (273)
++++.++++.++.++++++|||+||.+|+.++..+|++++++|++++........... +..... . ..+.....
T Consensus 184 ~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (371)
T PRK14875 184 AAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFA 263 (371)
T ss_pred HHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhc
Confidence 9999999999998999999999999999999999999999999998764322111000 000000 0 00000000
Q ss_pred ---CCC----------------hHHHHHHhhhhhccC-CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC
Q 024042 181 ---PES----------------ASQLRTLTGLAVSKN-LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK 240 (273)
Q Consensus 181 ---~~~----------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~ 240 (273)
... ...+.......+... ..........++.+|+++++|++|.++|.+..+.+. .+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~----~~ 339 (371)
T PRK14875 264 DPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP----DG 339 (371)
T ss_pred ChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc----CC
Confidence 000 000000000000000 011122245567789999999999999987665432 57
Q ss_pred cEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 241 ARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 241 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.++.+++++||+.++++|+++.+.|.+||++.
T Consensus 340 ~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 340 VAVHVLPGAGHMPQMEAAADVNRLLAEFLGKA 371 (371)
T ss_pred CeEEEeCCCCCChhhhCHHHHHHHHHHHhccC
Confidence 89999999999999999999999999999863
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=201.21 Aligned_cols=233 Identities=16% Similarity=0.136 Sum_probs=152.7
Q ss_pred CcceEEeecCCccCCCCC-CCCCeEEEEcCCCCchhHhHHHHH---HhhcC-CCeEEeecCCCCCCCCCCCc---cccHH
Q 024042 34 DETTLHFWGPKLEDDHKT-LKKPSLVLIHGFGPEAIWQWRKQV---QFFAP-HFNVYVPDLIFFGHSTTRSI---QRTEL 105 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~-~~~~~vi~~hG~~~~~~~~~~~~~---~~l~~-~~~v~~~d~~g~g~s~~~~~---~~~~~ 105 (273)
+|.+++|...| +.. ++.|+||++||++++. ..|..++ +.|.. +|+|+++|+||||.|..+.. .++.+
T Consensus 24 ~~~~l~y~~~G----~~~~~~~~~vll~~~~~~~~-~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 98 (339)
T PRK07581 24 PDARLAYKTYG----TLNAAKDNAILYPTWYSGTH-QDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAA 98 (339)
T ss_pred CCceEEEEecC----ccCCCCCCEEEEeCCCCCCc-ccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCC
Confidence 67889999987 211 3446677777777666 5565543 46754 59999999999999975532 22322
Q ss_pred -----HHHHHHHH----HHHHhCCcc-EEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH---HHh-----
Q 024042 106 -----FQAASLGK----LLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE---ALV----- 167 (273)
Q Consensus 106 -----~~~~~~~~----~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~---~~~----- 167 (273)
..++++.. ++++++.++ ++|+||||||.+|+.+|.++|++|+++|++++.......... ...
T Consensus 99 ~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~ 178 (339)
T PRK07581 99 RFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTA 178 (339)
T ss_pred CCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHh
Confidence 23444443 667899999 479999999999999999999999999999875532110000 000
Q ss_pred ---------------------hhhhh----hh-hhhccCC----CC-hHHHHHHhhhh----------------hc----
Q 024042 168 ---------------------KRANL----ER-IDHLMLP----ES-ASQLRTLTGLA----------------VS---- 196 (273)
Q Consensus 168 ---------------------~~~~~----~~-~~~~~~~----~~-~~~~~~~~~~~----------------~~---- 196 (273)
..... .. +...... .. ........... ..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 258 (339)
T PRK07581 179 DPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDIS 258 (339)
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccc
Confidence 00000 00 0000000 00 01010110000 00
Q ss_pred cCC--CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCC-CCCCcCcCChhhHHHHHHHHhccc
Q 024042 197 KNL--DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIEN-TSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 197 ~~~--~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
... .......+.++.+|+|+|+|++|..+|++..+.+.+.+ ++.+++++++ +||+.+.++++++...|.+||++.
T Consensus 259 ~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i-p~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 259 RNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI-PNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred cCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 000 00122345567789999999999999999999999998 8999999998 899999999999999999999874
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=191.05 Aligned_cols=228 Identities=16% Similarity=0.197 Sum_probs=158.4
Q ss_pred CCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-cccHHHHHHH
Q 024042 33 DDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QRTELFQAAS 110 (273)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~ 110 (273)
++|.+++|... ++++|+|||+||++.+. ..|..+...|.+. |+|+++|+||||.|..... ..+.++.+++
T Consensus 4 ~~~~~~~~~~~-------~~~~p~vvliHG~~~~~-~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~ 75 (273)
T PLN02211 4 ENGEEVTDMKP-------NRQPPHFVLIHGISGGS-WCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKP 75 (273)
T ss_pred ccccccccccc-------cCCCCeEEEECCCCCCc-CcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHH
Confidence 36777877774 45678999999999998 8999999999764 9999999999998754332 3688999999
Q ss_pred HHHHHHHhC-CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch-HHHhhhhh-hhhh------------
Q 024042 111 LGKLLEKIG-VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN-EALVKRAN-LERI------------ 175 (273)
Q Consensus 111 ~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~-~~~~~~~~-~~~~------------ 175 (273)
+.++++.+. .++++++||||||.++..++.++|++++++|++++......... ........ ....
T Consensus 76 l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (273)
T PLN02211 76 LIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGP 155 (273)
T ss_pred HHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCC
Confidence 999999885 48999999999999999999999999999999987543211111 00000000 0000
Q ss_pred --------------hhccCCCChHHHHHHhhhhhc-cCCCCC----hhhHHhhh-hccEEEEecCCCCCCChHHHHHHHH
Q 024042 176 --------------DHLMLPESASQLRTLTGLAVS-KNLDIV----PDFFFNDF-VHDVLIVWGDQDQIFPLKMATELKE 235 (273)
Q Consensus 176 --------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~ 235 (273)
...+....+............ ...... .......+ ..|+++|.|++|..+|++..+.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~ 235 (273)
T PLN02211 156 DQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIK 235 (273)
T ss_pred CCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHH
Confidence 000000000000000000000 000000 00011233 4599999999999999999999999
Q ss_pred HhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 236 LLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 236 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.+ +..+++.++ +||.+++++|+++.+.|.++..
T Consensus 236 ~~-~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 236 RW-PPSQVYELE-SDHSPFFSTPFLLFGLLIKAAA 268 (273)
T ss_pred hC-CccEEEEEC-CCCCccccCHHHHHHHHHHHHH
Confidence 98 777999997 8999999999999999988764
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-29 Score=190.84 Aligned_cols=234 Identities=21% Similarity=0.242 Sum_probs=159.3
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC-CCeEEeecCCCCCCCCCCCc---cccH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHSTTRSI---QRTE 104 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~~---~~~~ 104 (273)
.+++ +|..+.|...+ . .+.+++|||+||++++....|..+...+.+ +|+|+++|+||+|.|..+.. .++.
T Consensus 6 ~~~~-~~~~~~~~~~~----~-~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~ 79 (288)
T TIGR01250 6 IITV-DGGYHLFTKTG----G-EGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTI 79 (288)
T ss_pred eecC-CCCeEEEEecc----C-CCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccH
Confidence 4555 66677777764 1 234689999999866653556677777776 49999999999999986532 2688
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch--HHHhhhhh---hhhhhhcc
Q 024042 105 LFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN--EALVKRAN---LERIDHLM 179 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~ 179 (273)
++.++++.+++++++.++++++|||+||.+++.++..+|++++++|++++......... ........ ........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (288)
T TIGR01250 80 DYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCE 159 (288)
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHH
Confidence 99999999999999988999999999999999999999999999999887543221100 00000000 00000000
Q ss_pred ------------------------CCCChHHHHHHhhhh---h----ccC---------CCCChhhHHhhhhccEEEEec
Q 024042 180 ------------------------LPESASQLRTLTGLA---V----SKN---------LDIVPDFFFNDFVHDVLIVWG 219 (273)
Q Consensus 180 ------------------------~~~~~~~~~~~~~~~---~----~~~---------~~~~~~~~~~~~~~p~l~i~g 219 (273)
............... . ... ........+.++.+|+++++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 239 (288)
T TIGR01250 160 ASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVG 239 (288)
T ss_pred hccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEec
Confidence 000000000000000 0 000 000112234566779999999
Q ss_pred CCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 220 DQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 220 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
++|.+ +++..+.+.+.+ ++.++++++++||+.+.++|+++.+.|.+||+
T Consensus 240 ~~D~~-~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 240 EFDTM-TPEAAREMQELI-AGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred CCCcc-CHHHHHHHHHhc-cCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 99985 667888888888 88999999999999999999999999999985
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-31 Score=193.69 Aligned_cols=203 Identities=23% Similarity=0.343 Sum_probs=150.6
Q ss_pred EEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc--cccHHHHHHHHHHHHHHhCCccEEEEEeccchHH
Q 024042 57 LVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI--QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFV 134 (273)
Q Consensus 57 vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~ 134 (273)
|||+||++++. ..|..+++.|+++|+|+++|+||+|.|..... ..+.++.++++.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~-~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTG-GGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCH-HHHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 79999999999 99999999998779999999999999987663 5788999999999999999999999999999999
Q ss_pred HHHHHHhCCcccceEEEecCCCCCCCcc----hHHHhhhhh-----------hhhhhhccCCCChHHHHHHhhh------
Q 024042 135 AYHMARMWPERVEKVVIASSGVNMKRGD----NEALVKRAN-----------LERIDHLMLPESASQLRTLTGL------ 193 (273)
Q Consensus 135 a~~~a~~~~~~v~~~v~~~~~~~~~~~~----~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~------ 193 (273)
++.++.++|++++++|+++++....... ......... ...+.... ...........
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 156 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWF---DGDEPEDLIRSSRRALA 156 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccc---ccccccccccccccccc
Confidence 9999999999999999999987543211 001111000 00011001 11111111100
Q ss_pred -hhcc-CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHH
Q 024042 194 -AVSK-NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSI 264 (273)
Q Consensus 194 -~~~~-~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 264 (273)
.... ...........++..|+++++|++|.+++.+..+.+.+.. +++++++++++||+.+.++|++++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 157 EYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL-PNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS-TTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred cccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC-CCCEEEEECCCCCccHHHCHHHHhcC
Confidence 0000 0011122445566779999999999999999999999988 89999999999999999999998763
|
... |
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=200.02 Aligned_cols=239 Identities=20% Similarity=0.260 Sum_probs=160.1
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhH-----------hHHHHHH---hhc-CCCeEEeec
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIW-----------QWRKQVQ---FFA-PHFNVYVPD 88 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~-----------~~~~~~~---~l~-~~~~v~~~d 88 (273)
.+......+ +|.+++|...| .. ++++||+||+.++... .|..++. .|. ++|+|+++|
T Consensus 35 ~~~~~~~~~-~~~~l~y~~~G------~~-~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~D 106 (343)
T PRK08775 35 PLSMRHAGL-EDLRLRYELIG------PA-GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFD 106 (343)
T ss_pred ceeecCCCC-CCceEEEEEec------cC-CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEe
Confidence 344444555 88899999886 22 3357777766655512 6887875 564 569999999
Q ss_pred CCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccE-EEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch--HH
Q 024042 89 LIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERF-SVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN--EA 165 (273)
Q Consensus 89 ~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~--~~ 165 (273)
+||+|.|.. ..++..++++++.+++++++.+++ +++||||||.+|+.++.++|++|+++|++++......... ..
T Consensus 107 l~G~g~s~~--~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~ 184 (343)
T PRK08775 107 FIGADGSLD--VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRA 184 (343)
T ss_pred CCCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHH
Confidence 999998853 346778899999999999999764 7999999999999999999999999999998654321100 00
Q ss_pred Hhhhh------------h--------h------hhhhhccCCCC-------hHHHHHHhhh---hhccCCC---------
Q 024042 166 LVKRA------------N--------L------ERIDHLMLPES-------ASQLRTLTGL---AVSKNLD--------- 200 (273)
Q Consensus 166 ~~~~~------------~--------~------~~~~~~~~~~~-------~~~~~~~~~~---~~~~~~~--------- 200 (273)
..... . . ..+...+.... .......... .......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 264 (343)
T PRK08775 185 LQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSE 264 (343)
T ss_pred HHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHH
Confidence 00000 0 0 00000000000 0000000000 0000000
Q ss_pred --CChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCC-CCCCcCcCChhhHHHHHHHHhccc
Q 024042 201 --IVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIEN-TSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 201 --~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
........++..|+|+++|++|.++|.+..+.+.+.+.++.+++++++ +||..++|+|+++.+.|.+||++.
T Consensus 265 ~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 265 SIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRST 339 (343)
T ss_pred HHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhc
Confidence 000112346677999999999999999999999888756899999985 999999999999999999999763
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=189.31 Aligned_cols=214 Identities=29% Similarity=0.449 Sum_probs=149.3
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc--cccHHHHHHH-HHHHHHHhCCccEEEEEecc
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI--QRTELFQAAS-LGKLLEKIGVERFSVVGTSY 130 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~--~~~~~~~~~~-~~~~~~~~~~~~i~l~G~S~ 130 (273)
+|+||++||++++. ..|..+.+.|+++|+|+++|+||+|.|..+.. ..+.++.+++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~-~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSG-ADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCch-hhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 37899999999998 89999999998669999999999999976543 4577788888 77788888889999999999
Q ss_pred chHHHHHHHHhCCcccceEEEecCCCCCCCcchHH--------Hhhhhh---hhhhhh------ccCC---CChHHHHHH
Q 024042 131 GGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA--------LVKRAN---LERIDH------LMLP---ESASQLRTL 190 (273)
Q Consensus 131 Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~--------~~~~~~---~~~~~~------~~~~---~~~~~~~~~ 190 (273)
||.+|+.++.++|+.+++++++++........... ...... ...... .+.. .........
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQAL 159 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHHH
Confidence 99999999999999999999998765433211000 000000 000000 0000 000000000
Q ss_pred hhhhhcc--------------CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcC
Q 024042 191 TGLAVSK--------------NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE 256 (273)
Q Consensus 191 ~~~~~~~--------------~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 256 (273)
....... ............+.+|+++++|++|..++ +..+.+.+.. ++.+++.++++||+++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~gH~~~~e 237 (251)
T TIGR03695 160 RAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL-PNLTLVIIANAGHNIHLE 237 (251)
T ss_pred HHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC-CCCcEEEEcCCCCCcCcc
Confidence 0000000 00011122345567799999999998764 5666777777 889999999999999999
Q ss_pred ChhhHHHHHHHHhc
Q 024042 257 NPGLFNSIVKNFLR 270 (273)
Q Consensus 257 ~~~~~~~~i~~fl~ 270 (273)
+|+++.+.|.+|++
T Consensus 238 ~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 238 NPEAFAKILLAFLE 251 (251)
T ss_pred ChHHHHHHHHHHhC
Confidence 99999999999984
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=196.61 Aligned_cols=233 Identities=18% Similarity=0.226 Sum_probs=157.7
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhH----------hHHHHH---Hhh-cCCCeEEeecCCC--CCCCCC
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIW----------QWRKQV---QFF-APHFNVYVPDLIF--FGHSTT 97 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~----------~~~~~~---~~l-~~~~~v~~~d~~g--~g~s~~ 97 (273)
+|.+++|..+|+++ ...+++||++||++++... .|..++ ..| .++|+|+++|+|| +|.|..
T Consensus 14 ~~~~~~y~~~g~~~---~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~ 90 (351)
T TIGR01392 14 SDVRVAYETYGTLN---AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGP 90 (351)
T ss_pred CCceEEEEeccccC---CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCC
Confidence 77889999987211 1345799999999987622 367665 244 5559999999999 555542
Q ss_pred C------------CccccHHHHHHHHHHHHHHhCCcc-EEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH
Q 024042 98 R------------SIQRTELFQAASLGKLLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE 164 (273)
Q Consensus 98 ~------------~~~~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~ 164 (273)
. ...++++++++++.+++++++.++ ++++||||||.+++.++.++|++++++|++++..........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
T TIGR01392 91 SSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIA 170 (351)
T ss_pred CCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHH
Confidence 1 113688999999999999999998 999999999999999999999999999999987654321100
Q ss_pred --H-Hhhhhh-------------------h--------------hhhhhccCCCC---------------hHHHHHHhh-
Q 024042 165 --A-LVKRAN-------------------L--------------ERIDHLMLPES---------------ASQLRTLTG- 192 (273)
Q Consensus 165 --~-~~~~~~-------------------~--------------~~~~~~~~~~~---------------~~~~~~~~~- 192 (273)
. ...... . ..+...+.... .........
T Consensus 171 ~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
T TIGR01392 171 FNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGD 250 (351)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHH
Confidence 0 000000 0 00000000000 000000000
Q ss_pred hhh--------------ccCCCC-----ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEE-----EeCC
Q 024042 193 LAV--------------SKNLDI-----VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLE-----IIEN 248 (273)
Q Consensus 193 ~~~--------------~~~~~~-----~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 248 (273)
... ....+. .-...+.++..|+|+|+|++|.++|++.++.+.+.+ ++.++. ++++
T Consensus 251 ~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i-~~~~~~v~~~~i~~~ 329 (351)
T TIGR01392 251 KFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKAL-PAAGLRVTYVEIESP 329 (351)
T ss_pred HHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHH-hhcCCceEEEEeCCC
Confidence 000 000000 012445667779999999999999999999999999 676654 5678
Q ss_pred CCCCcCcCChhhHHHHHHHHhc
Q 024042 249 TSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 249 ~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
+||.+++++|+++.+.|.+||+
T Consensus 330 ~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 330 YGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CCcchhhcCHHHHHHHHHHHhC
Confidence 9999999999999999999985
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-29 Score=195.85 Aligned_cols=234 Identities=18% Similarity=0.178 Sum_probs=157.9
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHh-------------HHHHH----HhhcCCCeEEeecCCCC-CCC
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQ-------------WRKQV----QFFAPHFNVYVPDLIFF-GHS 95 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~-------------~~~~~----~~l~~~~~v~~~d~~g~-g~s 95 (273)
+|.+++|..+|.. ....+|+|||+||++++. .. |..++ ..+.++|+|+++|++|+ |.|
T Consensus 31 ~~~~~~y~~~G~~---~~~~~p~vvl~HG~~~~~-~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s 106 (379)
T PRK00175 31 PPVELAYETYGTL---NADRSNAVLICHALTGDH-HVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGS 106 (379)
T ss_pred CCceEEEEecccc---CCCCCCEEEEeCCcCCch-hhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCC
Confidence 5566789988721 122368999999999988 53 66665 23355699999999983 444
Q ss_pred CCCC--------------ccccHHHHHHHHHHHHHHhCCcc-EEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC
Q 024042 96 TTRS--------------IQRTELFQAASLGKLLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR 160 (273)
Q Consensus 96 ~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~ 160 (273)
..+. ..++.+++++++.+++++++.++ ++++||||||.+++.++.++|++++++|++++......
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 186 (379)
T PRK00175 107 TGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSA 186 (379)
T ss_pred CCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCH
Confidence 3221 14689999999999999999998 58999999999999999999999999999997664322
Q ss_pred cchHH---Hhhhhh----------------------------------hhhhhhccCC----CCh-------HHHHHHh-
Q 024042 161 GDNEA---LVKRAN----------------------------------LERIDHLMLP----ESA-------SQLRTLT- 191 (273)
Q Consensus 161 ~~~~~---~~~~~~----------------------------------~~~~~~~~~~----~~~-------~~~~~~~- 191 (273)
..... ...... ...+...+.. ... .......
T Consensus 187 ~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~ 266 (379)
T PRK00175 187 QNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLR 266 (379)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHH
Confidence 10000 000000 0000000000 000 0000000
Q ss_pred -------hhh----------hccCCC------CChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCc----EEE
Q 024042 192 -------GLA----------VSKNLD------IVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKA----RLE 244 (273)
Q Consensus 192 -------~~~----------~~~~~~------~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~----~~~ 244 (273)
... .....+ ..-...+.++.+|+|+|+|++|.++|++..+.+.+.+ ++. +++
T Consensus 267 ~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i-~~a~~~~~l~ 345 (379)
T PRK00175 267 YQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDAL-LAAGADVSYA 345 (379)
T ss_pred HHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHH-HhcCCCeEEE
Confidence 000 000000 0123445677789999999999999999999999999 555 777
Q ss_pred EeC-CCCCCcCcCChhhHHHHHHHHhccc
Q 024042 245 IIE-NTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 245 ~~~-~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+++ ++||..++++|+++++.|.+||++.
T Consensus 346 ~i~~~~GH~~~le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 346 EIDSPYGHDAFLLDDPRYGRLVRAFLERA 374 (379)
T ss_pred EeCCCCCchhHhcCHHHHHHHHHHHHHhh
Confidence 775 8999999999999999999999864
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=193.29 Aligned_cols=220 Identities=19% Similarity=0.250 Sum_probs=146.2
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccc-c----HHHHHHHHHHHHHHhCCccEEE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQR-T----ELFQAASLGKLLEKIGVERFSV 125 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~-~----~~~~~~~~~~~~~~~~~~~i~l 125 (273)
++++|+||++||++++. ..|...+..|.++|+|+++|+||+|.|..+.... + .+..++++.++++.++.+++++
T Consensus 102 ~~~~p~vvllHG~~~~~-~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~l 180 (402)
T PLN02894 102 KEDAPTLVMVHGYGASQ-GFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFIL 180 (402)
T ss_pred CCCCCEEEEECCCCcch-hHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEE
Confidence 34678999999999888 8888888889888999999999999997654221 1 1234667778888888899999
Q ss_pred EEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH--HHhh-----------hh----------------------
Q 024042 126 VGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE--ALVK-----------RA---------------------- 170 (273)
Q Consensus 126 ~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~--~~~~-----------~~---------------------- 170 (273)
+||||||.+|+.++.++|++++++|++++.......... .... ..
T Consensus 181 vGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~ 260 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLV 260 (402)
T ss_pred EEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHH
Confidence 999999999999999999999999999876543221100 0000 00
Q ss_pred ---hhhhhhhcc-----CCCChHHHHHHhhhh-------------hccC---CCCChhhHHhhhhccEEEEecCCCCCCC
Q 024042 171 ---NLERIDHLM-----LPESASQLRTLTGLA-------------VSKN---LDIVPDFFFNDFVHDVLIVWGDQDQIFP 226 (273)
Q Consensus 171 ---~~~~~~~~~-----~~~~~~~~~~~~~~~-------------~~~~---~~~~~~~~~~~~~~p~l~i~g~~D~~~~ 226 (273)
....+.... .......+....... .... ........+.++..|+++++|++|.+.+
T Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~ 340 (402)
T PLN02894 261 RRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY 340 (402)
T ss_pred HHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc
Confidence 000000000 000001010000000 0000 0001112245566799999999998765
Q ss_pred hHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 227 LKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
...+.+.+.....+++++++++||+.+.|+|+++.+.+.+|++..
T Consensus 341 -~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~ 385 (402)
T PLN02894 341 -EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKY 385 (402)
T ss_pred -HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHh
Confidence 555556655535689999999999999999999999999887653
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=191.65 Aligned_cols=242 Identities=15% Similarity=0.155 Sum_probs=161.5
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-ccc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QRT 103 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~~ 103 (273)
....+..+++..+++..+.++ ....+++||++||++++. ..|..+++.|.+. |+|+++|+||||.|..... ..+
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~---~~~~~~~Vl~lHG~~~~~-~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~ 186 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPA---AGEMRGILIIIHGLNEHS-GRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPS 186 (395)
T ss_pred EEEEEECCCCCEEEEEEecCC---CCCCceEEEEECCchHHH-HHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcC
Confidence 334455567788888877631 234567999999999887 8899999999765 9999999999999986543 236
Q ss_pred HHHHHHHHHHHHHHhCC----ccEEEEEeccchHHHHHHHHhCC---cccceEEEecCCCCCCCcchH-HHhhhhhhhhh
Q 024042 104 ELFQAASLGKLLEKIGV----ERFSVVGTSYGGFVAYHMARMWP---ERVEKVVIASSGVNMKRGDNE-ALVKRANLERI 175 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~~~----~~i~l~G~S~Gg~~a~~~a~~~~---~~v~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~ 175 (273)
.+.+.+|+..+++.+.. .+++++||||||.+++.++. +| ++++++|+.+|.......... ...........
T Consensus 187 ~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~ 265 (395)
T PLN02652 187 LDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVA 265 (395)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhC
Confidence 77778888888887642 47999999999999998775 45 479999999987654322110 00000000000
Q ss_pred hhc-c---------CCCChHHHHHHhhh-hhccCCCC---------C---hhhHHhhhhccEEEEecCCCCCCChHHHHH
Q 024042 176 DHL-M---------LPESASQLRTLTGL-AVSKNLDI---------V---PDFFFNDFVHDVLIVWGDQDQIFPLKMATE 232 (273)
Q Consensus 176 ~~~-~---------~~~~~~~~~~~~~~-~~~~~~~~---------~---~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~ 232 (273)
... + .............. ........ . ....+.++..|+|+++|++|.++|++.++.
T Consensus 266 p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~ 345 (395)
T PLN02652 266 PRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQD 345 (395)
T ss_pred CCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHH
Confidence 000 0 00011111111000 00000000 0 011224456799999999999999999999
Q ss_pred HHHHhc-CCcEEEEeCCCCCCcCcC-ChhhHHHHHHHHhccc
Q 024042 233 LKELLG-KKARLEIIENTSHVPQIE-NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 233 ~~~~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~ 272 (273)
+++... .+++++++++++|..+.+ +++++.+.+.+||+++
T Consensus 346 l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 346 LYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred HHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 998862 458899999999998666 7899999999999865
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-28 Score=184.04 Aligned_cols=242 Identities=19% Similarity=0.212 Sum_probs=167.1
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCC-CCCc-cc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHST-TRSI-QR 102 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~-~~~~-~~ 102 (273)
....+...||..++|+.+.+ ..+...+||++||.+.+. ..|..++..|... |.|+++|+||||.|. +... ..
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~----~~~~~g~Vvl~HG~~Eh~-~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~ 84 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAA----PEPPKGVVVLVHGLGEHS-GRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVD 84 (298)
T ss_pred ccceeecCCCceEEEEeecC----CCCCCcEEEEecCchHHH-HHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCch
Confidence 44556666999999999862 223337999999999999 8999999988887 999999999999997 3333 33
Q ss_pred cHHHHHHHHHHHHHHhC----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh---hhh
Q 024042 103 TELFQAASLGKLLEKIG----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL---ERI 175 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~ 175 (273)
+..++.+|+..+++... ..+++++||||||.+|+.++.+++.+++++|+.+|.................. ..+
T Consensus 85 ~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~ 164 (298)
T COG2267 85 SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRI 164 (298)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhccccccc
Confidence 67888899998888774 37899999999999999999999999999999999888763110111000000 000
Q ss_pred ------hh----c----cCCCChHHHHHHhhhhhccCCCCCh--------------hhHHhhhhccEEEEecCCCCCCC-
Q 024042 176 ------DH----L----MLPESASQLRTLTGLAVSKNLDIVP--------------DFFFNDFVHDVLIVWGDQDQIFP- 226 (273)
Q Consensus 176 ------~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~p~l~i~g~~D~~~~- 226 (273)
.. . .........+.+............. ......+..|+|+++|++|.+++
T Consensus 165 ~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~ 244 (298)
T COG2267 165 RPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDN 244 (298)
T ss_pred ccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccC
Confidence 00 0 0011111111111111000000000 01122333499999999999999
Q ss_pred hHHHHHHHHHhc-CCcEEEEeCCCCCCcCcC-Ch--hhHHHHHHHHhccc
Q 024042 227 LKMATELKELLG-KKARLEIIENTSHVPQIE-NP--GLFNSIVKNFLRGS 272 (273)
Q Consensus 227 ~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-~~--~~~~~~i~~fl~~~ 272 (273)
.+...++.+..+ +++++++++|+.|..+.| +. +++.+.+.+|+.++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 245 VEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEA 294 (298)
T ss_pred cHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhh
Confidence 687888777774 668999999999987765 44 78899999999865
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-28 Score=186.26 Aligned_cols=234 Identities=19% Similarity=0.197 Sum_probs=152.8
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhc-CCCeEEeecCCCCCCCCCCCc--cc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFA-PHFNVYVPDLIFFGHSTTRSI--QR 102 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~s~~~~~--~~ 102 (273)
...++...+|.+++|...+ ..+.++|||+||++++. ..+ .+...+. .+|+|+++|+||||.|..... ..
T Consensus 5 ~~~~~~~~~~~~l~y~~~g------~~~~~~lvllHG~~~~~-~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 76 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSG------NPDGKPVVFLHGGPGSG-TDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEEN 76 (306)
T ss_pred cCCeEEcCCCcEEEEEECc------CCCCCEEEEECCCCCCC-CCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccC
Confidence 4578888889999999886 33467899999987765 332 3334444 359999999999999986543 34
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch------------HHHhhhh
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN------------EALVKRA 170 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~------------~~~~~~~ 170 (273)
+.++.++++..++++++.++++++||||||.+++.++.++|++++++|++++......... ..+....
T Consensus 77 ~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (306)
T TIGR01249 77 TTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFM 156 (306)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHh
Confidence 6778899999999999999999999999999999999999999999999987543221000 0000000
Q ss_pred h-----------hhhhhhccCCCChHH---HHHHh----hhhhccC---------------------------CCCCh--
Q 024042 171 N-----------LERIDHLMLPESASQ---LRTLT----GLAVSKN---------------------------LDIVP-- 203 (273)
Q Consensus 171 ~-----------~~~~~~~~~~~~~~~---~~~~~----~~~~~~~---------------------------~~~~~-- 203 (273)
. ...+........... ..... ....... ....+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (306)
T TIGR01249 157 DSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVE 236 (306)
T ss_pred hhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCc
Confidence 0 000000000001000 00000 0000000 00000
Q ss_pred ---hhHHhhh-hccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 204 ---DFFFNDF-VHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 204 ---~~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.....++ ..|+++++|++|.++|.+.++.+++.+ ++.++++++++||..+. + +..+.|.+|+.+
T Consensus 237 ~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~gH~~~~--~-~~~~~i~~~~~~ 304 (306)
T TIGR01249 237 NFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF-PEAELKVTNNAGHSAFD--P-NNLAALVHALET 304 (306)
T ss_pred hHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCCCCC--h-HHHHHHHHHHHH
Confidence 0112334 369999999999999999999999999 89999999999999753 2 234555555543
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=187.97 Aligned_cols=238 Identities=16% Similarity=0.142 Sum_probs=157.6
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcccc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
++...+...+|.++..+...|+ .+++.|+||++||+++.....|..+.+.|.+. |.|+++|+||+|.|.......+
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~---~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d 244 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPK---GDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQD 244 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECC---CCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcccc
Confidence 4555566657767887765432 23456788877777665435677888888776 9999999999999975433234
Q ss_pred HHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhh--hhhhhhhhhc
Q 024042 104 ELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVK--RANLERIDHL 178 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 178 (273)
.....+.+.+++... +.++++++|||+||.+|+.+|..+|++++++|+++++............. ......+...
T Consensus 245 ~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~la~~ 324 (414)
T PRK05077 245 SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVLASR 324 (414)
T ss_pred HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHHHHHH
Confidence 444445566666554 55899999999999999999999999999999999876422111111000 0000001111
Q ss_pred c--CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcC
Q 024042 179 M--LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE 256 (273)
Q Consensus 179 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 256 (273)
+ .......+.......... .......++..|+|+++|++|.++|.+.++.+.+.. ++.+++++|++ ++.+
T Consensus 325 lg~~~~~~~~l~~~l~~~sl~----~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~-~~~~l~~i~~~---~~~e 396 (414)
T PRK05077 325 LGMHDASDEALRVELNRYSLK----VQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS-ADGKLLEIPFK---PVYR 396 (414)
T ss_pred hCCCCCChHHHHHHhhhccch----hhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC-CCCeEEEccCC---CccC
Confidence 1 111222222221111000 111112467779999999999999999999988888 89999999975 4467
Q ss_pred ChhhHHHHHHHHhcccC
Q 024042 257 NPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 257 ~~~~~~~~i~~fl~~~l 273 (273)
.++++.+.+.+||+++|
T Consensus 397 ~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 397 NFDKALQEISDWLEDRL 413 (414)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 89999999999998764
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-28 Score=190.62 Aligned_cols=248 Identities=13% Similarity=0.083 Sum_probs=155.9
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH-HHHHHh-hcCCCeEEeecCCCCCCCCCCCc
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW-RKQVQF-FAPHFNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-~~~~~~-l~~~~~v~~~d~~g~g~s~~~~~ 100 (273)
..++.+.+.++||..+.+....+........+|+||++||++++....| ..++.. +.++|+|+++|+||||.|.....
T Consensus 69 ~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~ 148 (388)
T PLN02511 69 VRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTP 148 (388)
T ss_pred CceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCc
Confidence 3457788999999988865442111112346789999999977652334 445544 45569999999999999976544
Q ss_pred cccHHHHHHHHHHHHHHhCC----ccEEEEEeccchHHHHHHHHhCCcc--cceEEEecCCCCCCCcc-----------h
Q 024042 101 QRTELFQAASLGKLLEKIGV----ERFSVVGTSYGGFVAYHMARMWPER--VEKVVIASSGVNMKRGD-----------N 163 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~----~~i~l~G~S~Gg~~a~~~a~~~~~~--v~~~v~~~~~~~~~~~~-----------~ 163 (273)
........+|+.++++++.. .+++++||||||.+++.++.+++++ +.++++++++....... .
T Consensus 149 ~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~ 228 (388)
T PLN02511 149 QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYD 228 (388)
T ss_pred CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHH
Confidence 33334556677777776643 5899999999999999999999887 88888887765431100 0
Q ss_pred HHHhhhhh-h-h----hhhh---cc------CCCChHHHHHHhhhhhccCC-------CCChhhHHhhhhccEEEEecCC
Q 024042 164 EALVKRAN-L-E----RIDH---LM------LPESASQLRTLTGLAVSKNL-------DIVPDFFFNDFVHDVLIVWGDQ 221 (273)
Q Consensus 164 ~~~~~~~~-~-~----~~~~---~~------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~p~l~i~g~~ 221 (273)
..+..... . . .+.. .. .......+............ .......+.++..|+|+|+|++
T Consensus 229 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~d 308 (388)
T PLN02511 229 KALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAAN 308 (388)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCC
Confidence 00000000 0 0 0000 00 00000001111111000000 0112234566778999999999
Q ss_pred CCCCChHHH-HHHHHHhcCCcEEEEeCCCCCCcCcCChhh------HHHHHHHHhcc
Q 024042 222 DQIFPLKMA-TELKELLGKKARLEIIENTSHVPQIENPGL------FNSIVKNFLRG 271 (273)
Q Consensus 222 D~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~------~~~~i~~fl~~ 271 (273)
|+++|.+.. ....+.. +++++++++++||..++|+|+. +.+.+.+||+.
T Consensus 309 Dpi~p~~~~~~~~~~~~-p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~ 364 (388)
T PLN02511 309 DPIAPARGIPREDIKAN-PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEA 364 (388)
T ss_pred CCcCCcccCcHhHHhcC-CCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHH
Confidence 999997754 3455556 8999999999999999998865 47888888864
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-27 Score=170.92 Aligned_cols=245 Identities=16% Similarity=0.160 Sum_probs=170.6
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc-c
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ-R 102 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~-~ 102 (273)
.....++.++|.++.+..+.|.+. ...+..|+++||++......|..++..|+.. |.|+++|++|||.|++.... .
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~--~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~ 104 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSG--TEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVP 104 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCC--CCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCC
Confidence 456678888999998877763221 2456689999999988767888899999887 99999999999999976554 3
Q ss_pred cHHHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch-HHH----hhhhh
Q 024042 103 TELFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN-EAL----VKRAN 171 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~-~~~----~~~~~ 171 (273)
+.+..++|+....+.. ...+..++||||||.+++.++.+.|+..+++|+++|......... ..+ .....
T Consensus 105 ~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~ 184 (313)
T KOG1455|consen 105 SFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLS 184 (313)
T ss_pred cHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHH
Confidence 7888889988888764 225789999999999999999999999999999999776554431 111 00000
Q ss_pred --hhhhhhccC--------CCChHHHHHHhhhhhccC-C-CC-----------ChhhHHhhhhccEEEEecCCCCCCChH
Q 024042 172 --LERIDHLML--------PESASQLRTLTGLAVSKN-L-DI-----------VPDFFFNDFVHDVLIVWGDQDQIFPLK 228 (273)
Q Consensus 172 --~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-~-~~-----------~~~~~~~~~~~p~l~i~g~~D~~~~~~ 228 (273)
.+.+. ... -..+.............. . .. .-...+.++..|.+++||++|.++.++
T Consensus 185 ~liP~wk-~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~ 263 (313)
T KOG1455|consen 185 KLIPTWK-IVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPK 263 (313)
T ss_pred HhCCcee-ecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcH
Confidence 00111 000 011111111111100000 0 00 011123344449999999999999999
Q ss_pred HHHHHHHHh-cCCcEEEEeCCCCCCcCc----CChhhHHHHHHHHhccc
Q 024042 229 MATELKELL-GKKARLEIIENTSHVPQI----ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 229 ~~~~~~~~~-~~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~~ 272 (273)
.++.+++.. ..++++++|||.=|.... ++-+.+...|.+||+++
T Consensus 264 ~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 264 VSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999999988 478999999999998764 34567888899999875
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=176.34 Aligned_cols=222 Identities=14% Similarity=0.166 Sum_probs=148.8
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCC-CCCCCCCccccH
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFF-GHSTTRSIQRTE 104 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-g~s~~~~~~~~~ 104 (273)
.+-+.+.+|.+|+.|...|+.. ...+.++||++||++... ..+..+++.|.++ |.|+.+|+||+ |.|.+.....+.
T Consensus 11 ~~~~~~~dG~~L~Gwl~~P~~~-~~~~~~~vIi~HGf~~~~-~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~ 88 (307)
T PRK13604 11 DHVICLENGQSIRVWETLPKEN-SPKKNNTILIASGFARRM-DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTM 88 (307)
T ss_pred hheEEcCCCCEEEEEEEcCccc-CCCCCCEEEEeCCCCCCh-HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcc
Confidence 4567888999999999874321 234568999999999987 6799999999887 99999999987 899765543333
Q ss_pred HHHHHHHHHHH---HHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCC
Q 024042 105 LFQAASLGKLL---EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLP 181 (273)
Q Consensus 105 ~~~~~~~~~~~---~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (273)
.....|+..++ +..+.++++|+||||||.+|+.+|... .++++|+.+|...........+..... .+.....+
T Consensus 89 s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~~~~--~~p~~~lp 164 (307)
T PRK13604 89 SIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGYDYL--SLPIDELP 164 (307)
T ss_pred cccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhcccc--cCcccccc
Confidence 33344554444 444567899999999999997777643 399999999988754211111110000 00000000
Q ss_pred CCh----HH--HHHHhhhhhccC--CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCCCCCC
Q 024042 182 ESA----SQ--LRTLTGLAVSKN--LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTSHV 252 (273)
Q Consensus 182 ~~~----~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~ 252 (273)
... .. ...+....+... ....+.....++..|+|+|||++|.+||.+.++.+++.++ .+++++++||++|.
T Consensus 165 ~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~ 244 (307)
T PRK13604 165 EDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHD 244 (307)
T ss_pred cccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccc
Confidence 000 00 012222111111 1123445566677899999999999999999999999883 58999999999998
Q ss_pred cC
Q 024042 253 PQ 254 (273)
Q Consensus 253 ~~ 254 (273)
+.
T Consensus 245 l~ 246 (307)
T PRK13604 245 LG 246 (307)
T ss_pred cC
Confidence 74
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=215.00 Aligned_cols=251 Identities=19% Similarity=0.236 Sum_probs=170.9
Q ss_pred HHHHHHhhhhCCCceeEEecCCc-ce--EEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecC
Q 024042 13 RIYLRRCFASAGLSSQTIDIDDE-TT--LHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDL 89 (273)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~g-~~--l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~ 89 (273)
.....+++...++....+.+..+ .. ++|...| ..+.+++|||+||++++. ..|..+...|.+.|+|+++|+
T Consensus 1332 ~~~~~~~~~~~~l~~~~~~v~~~~~~~~i~~~~~G-----~~~~~~~vVllHG~~~s~-~~w~~~~~~L~~~~rVi~~Dl 1405 (1655)
T PLN02980 1332 NDVIVRTFKEEQVRTYELRVDVDGFSCLIKVHEVG-----QNAEGSVVLFLHGFLGTG-EDWIPIMKAISGSARCISIDL 1405 (1655)
T ss_pred HHHHHHHhccCCCceEEEEEccCceEEEEEEEecC-----CCCCCCeEEEECCCCCCH-HHHHHHHHHHhCCCEEEEEcC
Confidence 34455566777787777777533 22 3333333 123468999999999999 899999999988899999999
Q ss_pred CCCCCCCCCC--------ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc
Q 024042 90 IFFGHSTTRS--------IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG 161 (273)
Q Consensus 90 ~g~g~s~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~ 161 (273)
||||.|.... ..++.+..++++.+++++++.++++++||||||.+|+.++.++|++++++|++++.......
T Consensus 1406 ~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~ 1485 (1655)
T PLN02980 1406 PGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDE 1485 (1655)
T ss_pred CCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCch
Confidence 9999997542 24578889999999999999999999999999999999999999999999999875433211
Q ss_pred chHHHhh-----------hhhhhhh-hhccCCC------ChHHHHHHhhhh------------hcc---CCCCChhhHHh
Q 024042 162 DNEALVK-----------RANLERI-DHLMLPE------SASQLRTLTGLA------------VSK---NLDIVPDFFFN 208 (273)
Q Consensus 162 ~~~~~~~-----------~~~~~~~-~~~~~~~------~~~~~~~~~~~~------------~~~---~~~~~~~~~~~ 208 (273)
....... ......+ ..++... ............ ... .........+.
T Consensus 1486 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~ 1565 (1655)
T PLN02980 1486 VARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLK 1565 (1655)
T ss_pred HHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHh
Confidence 1000000 0000000 0000000 000000000000 000 00011123356
Q ss_pred hhhccEEEEecCCCCCCChHHHHHHHHHhcCC------------cEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 209 DFVHDVLIVWGDQDQIFPLKMATELKELLGKK------------ARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 209 ~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~------------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
++..|+|+|+|++|..++ +.++.+.+.+ ++ +++++++++||++++|+|+++.+.|.+||++
T Consensus 1566 ~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i-~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1566 QCDTPLLLVVGEKDVKFK-QIAQKMYREI-GKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred hCCCCEEEEEECCCCccH-HHHHHHHHHc-cccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 677799999999999875 6667777776 33 5899999999999999999999999999975
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-29 Score=168.25 Aligned_cols=243 Identities=18% Similarity=0.140 Sum_probs=178.8
Q ss_pred hhCCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC--CeEEeecCCCCCCCCCC
Q 024042 21 ASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH--FNVYVPDLIFFGHSTTR 98 (273)
Q Consensus 21 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~s~~~ 98 (273)
.....++..+.+ +|.+++|..+| .....|++++|.-++....|.+.+..+.+. +.|+++|.||+|.|.++
T Consensus 17 ~~~~~te~kv~v-ng~ql~y~~~G-------~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP 88 (277)
T KOG2984|consen 17 TQSDYTESKVHV-NGTQLGYCKYG-------HGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPP 88 (277)
T ss_pred ccchhhhheeee-cCceeeeeecC-------CCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCC
Confidence 344556777888 99999999996 344578999997666658888887776554 99999999999999987
Q ss_pred CccccHH---HHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhh
Q 024042 99 SIQRTEL---FQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERI 175 (273)
Q Consensus 99 ~~~~~~~---~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (273)
......+ ..+++...+++.+..+++.++|||-||..|+.+|+++++.|..+|++++...........+........+
T Consensus 89 ~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kW 168 (277)
T KOG2984|consen 89 ERKFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKW 168 (277)
T ss_pred cccchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhh
Confidence 7655443 3466778888999999999999999999999999999999999999998776554321111111100000
Q ss_pred hh-----ccCCCChHHHHHHhh-------hhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEE
Q 024042 176 DH-----LMLPESASQLRTLTG-------LAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARL 243 (273)
Q Consensus 176 ~~-----~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 243 (273)
.. ...-...+.++..+. ..........-+..+.++.+|+||++|++|++++...+-.+.... +.+++
T Consensus 169 s~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~-~~a~~ 247 (277)
T KOG2984|consen 169 SARGRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK-SLAKV 247 (277)
T ss_pred hhhhcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhc-ccceE
Confidence 00 000112222222221 111222233455667888889999999999999988888888877 89999
Q ss_pred EEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 244 EIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 244 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.++|.++|.+++..++++...+.+||++.
T Consensus 248 ~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 248 EIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred EEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 99999999999999999999999999864
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-27 Score=162.00 Aligned_cols=213 Identities=20% Similarity=0.263 Sum_probs=153.9
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh---CCccEEEEEe
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI---GVERFSVVGT 128 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~ 128 (273)
.+..|+++||+.++. ...+.+.+.|.++ |.|.+|.+||||.........+.+++.+++.+..+.+ +.+.|.++|.
T Consensus 14 G~~AVLllHGFTGt~-~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 14 GNRAVLLLHGFTGTP-RDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CCEEEEEEeccCCCc-HHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 347999999999999 9999999999988 9999999999998764444556666666666555554 6799999999
Q ss_pred ccchHHHHHHHHhCCcccceEEEecCCCCCCCcc--hHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCC-------
Q 024042 129 SYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD--NEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNL------- 199 (273)
Q Consensus 129 S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 199 (273)
||||.+|+.+|..+| ++++|.++++....... ...+.... .-........................
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~---~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~ 167 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYF---RNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLK 167 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHH---HHhhhccCCCHHHHHHHHHHhhcchHHHHHHHH
Confidence 999999999999998 99999999988754332 11111111 11112222333333332222110000
Q ss_pred --CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh-cCCcEEEEeCCCCCCcCcC-ChhhHHHHHHHHhcc
Q 024042 200 --DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL-GKKARLEIIENTSHVPQIE-NPGLFNSIVKNFLRG 271 (273)
Q Consensus 200 --~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 271 (273)
.......+..+..|++++.|.+|+.+|.+.+..+++.. ..+.++.+++++||....+ ..+.+.+.+..||+.
T Consensus 168 ~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 168 KLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 00112234455559999999999999999999999988 4678999999999987664 678899999999974
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-27 Score=195.49 Aligned_cols=233 Identities=14% Similarity=0.160 Sum_probs=154.1
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc--cccHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI--QRTELF 106 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~--~~~~~~ 106 (273)
.++. +|.+++|+.++ +.+.|+|||+||++++. ..|..+.+.|.++|+|+++|+||||.|..+.. .++.++
T Consensus 7 ~~~~-~g~~l~~~~~g------~~~~~~ivllHG~~~~~-~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 78 (582)
T PRK05855 7 VVSS-DGVRLAVYEWG------DPDRPTVVLVHGYPDNH-EVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLAR 78 (582)
T ss_pred EEee-CCEEEEEEEcC------CCCCCeEEEEcCCCchH-HHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHH
Confidence 3444 89999999886 34578999999999998 89999999997779999999999999986443 468999
Q ss_pred HHHHHHHHHHHhCCcc-EEEEEeccchHHHHHHHHhC--CcccceEEEecCCCCCCCc----------chH---HHhhhh
Q 024042 107 QAASLGKLLEKIGVER-FSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVNMKRG----------DNE---ALVKRA 170 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~~~~~----------~~~---~~~~~~ 170 (273)
+++++..++++++..+ ++++||||||.+++.++.+. ++++..++.++++...... ... ......
T Consensus 79 ~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (582)
T PRK05855 79 LADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQL 158 (582)
T ss_pred HHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHH
Confidence 9999999999998755 99999999999998887762 3444444444432210000 000 000000
Q ss_pred hhhhh----hhccCC------CChHHHHHHhhhhhc-----------------------c-CCCCChhhHHhhhhccEEE
Q 024042 171 NLERI----DHLMLP------ESASQLRTLTGLAVS-----------------------K-NLDIVPDFFFNDFVHDVLI 216 (273)
Q Consensus 171 ~~~~~----~~~~~~------~~~~~~~~~~~~~~~-----------------------~-~~~~~~~~~~~~~~~p~l~ 216 (273)
..... .....+ ............... . ............+..|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li 238 (582)
T PRK05855 159 LRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQL 238 (582)
T ss_pred hhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEE
Confidence 00000 000000 000000000000000 0 0000000001225669999
Q ss_pred EecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 217 VWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 217 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
++|++|.++|.+..+.+.+.. ++.++++++ +||+.+.++|+++.+.|.+|+.+
T Consensus 239 i~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 239 IVPTGDPYVRPALYDDLSRWV-PRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred EEeCCCcccCHHHhccccccC-CcceEEEcc-CCCcchhhChhHHHHHHHHHHHh
Confidence 999999999999998888777 788888886 79999999999999999999975
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-25 Score=170.25 Aligned_cols=235 Identities=15% Similarity=0.146 Sum_probs=152.4
Q ss_pred EecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH-------------------------HHHHHhhcCC-Ce
Q 024042 30 IDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW-------------------------RKQVQFFAPH-FN 83 (273)
Q Consensus 30 ~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-------------------------~~~~~~l~~~-~~ 83 (273)
+...||.+|+++.+.+ ...+.+|+++||++.+....+ ..+++.|.+. |.
T Consensus 2 ~~~~~g~~l~~~~~~~-----~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIV-----KNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred ccCCCCCeEEEeeeec-----cCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 3445899999888852 245679999999998872121 3568888776 99
Q ss_pred EEeecCCCCCCCCCCCc---c-ccHHHHHHHHHHHHHHhC------------------------CccEEEEEeccchHHH
Q 024042 84 VYVPDLIFFGHSTTRSI---Q-RTELFQAASLGKLLEKIG------------------------VERFSVVGTSYGGFVA 135 (273)
Q Consensus 84 v~~~d~~g~g~s~~~~~---~-~~~~~~~~~~~~~~~~~~------------------------~~~i~l~G~S~Gg~~a 135 (273)
|+++|+||||.|..... . .+.+++++|+..+++... ..+++++||||||.++
T Consensus 77 V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~ 156 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIA 156 (332)
T ss_pred EEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHH
Confidence 99999999999885422 1 367888888888887641 2479999999999999
Q ss_pred HHHHHhCCc--------ccceEEEecCCCCCCCcc-------h---HHHhhhhhhhhhhhcc-------CCCChHHHHHH
Q 024042 136 YHMARMWPE--------RVEKVVIASSGVNMKRGD-------N---EALVKRANLERIDHLM-------LPESASQLRTL 190 (273)
Q Consensus 136 ~~~a~~~~~--------~v~~~v~~~~~~~~~~~~-------~---~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 190 (273)
+.++.++++ .++++|+++|........ . ..+..... .+...+ ....+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~ 234 (332)
T TIGR01607 157 LRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMS--RVFPTFRISKKIRYEKSPYVNDII 234 (332)
T ss_pred HHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHH--HHCCcccccCccccccChhhhhHH
Confidence 999876532 589999888875332100 0 01111000 000000 00001111111
Q ss_pred hhhhhccCCCCCh-------------hhHHhhh--hccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCCCCCCcC
Q 024042 191 TGLAVSKNLDIVP-------------DFFFNDF--VHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTSHVPQ 254 (273)
Q Consensus 191 ~~~~~~~~~~~~~-------------~~~~~~~--~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~ 254 (273)
....+........ ......+ ..|+|+++|++|.+++.+.++.+++..+ ++++++++++++|..+
T Consensus 235 ~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~ 314 (332)
T TIGR01607 235 KFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVIT 314 (332)
T ss_pred hcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCc
Confidence 1111000000000 0012223 3599999999999999999999887763 5789999999999988
Q ss_pred cCC-hhhHHHHHHHHhcc
Q 024042 255 IEN-PGLFNSIVKNFLRG 271 (273)
Q Consensus 255 ~~~-~~~~~~~i~~fl~~ 271 (273)
.|. ++++.+.+.+||+.
T Consensus 315 ~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 315 IEPGNEEVLKKIIEWISN 332 (332)
T ss_pred cCCCHHHHHHHHHHHhhC
Confidence 874 68899999999863
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-24 Score=168.67 Aligned_cols=235 Identities=16% Similarity=0.180 Sum_probs=157.3
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHh------------HHHHH---HhhcCC-CeEEeecCCCCCCCCCC
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQ------------WRKQV---QFFAPH-FNVYVPDLIFFGHSTTR 98 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~------------~~~~~---~~l~~~-~~v~~~d~~g~g~s~~~ 98 (273)
..++.|..+|.. ...+.++||++|+++++.... |..++ ..|..+ |-||++|..|-+.|..+
T Consensus 40 ~~~~~Y~t~G~l---n~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p 116 (389)
T PRK06765 40 DVQMGYETYGTL---NRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDP 116 (389)
T ss_pred CceEEEEecccc---CCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCC
Confidence 456789999832 234568999999998865111 55554 245444 99999999987653211
Q ss_pred ---------------------CccccHHHHHHHHHHHHHHhCCccEE-EEEeccchHHHHHHHHhCCcccceEEEecCCC
Q 024042 99 ---------------------SIQRTELFQAASLGKLLEKIGVERFS-VVGTSYGGFVAYHMARMWPERVEKVVIASSGV 156 (273)
Q Consensus 99 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~ 156 (273)
.+.+++.++++++..++++++.+++. ++||||||++|+.++.++|++++++|++++..
T Consensus 117 ~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~ 196 (389)
T PRK06765 117 NVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNP 196 (389)
T ss_pred CCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCC
Confidence 12368999999999999999999986 99999999999999999999999999998765
Q ss_pred CCCCcchHHHhh----hh-hh--------------------------------hhhhhccCCC-----C-------hHHH
Q 024042 157 NMKRGDNEALVK----RA-NL--------------------------------ERIDHLMLPE-----S-------ASQL 187 (273)
Q Consensus 157 ~~~~~~~~~~~~----~~-~~--------------------------------~~~~~~~~~~-----~-------~~~~ 187 (273)
.........+.. .. .. ..+...+... . ....
T Consensus 197 ~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~ 276 (389)
T PRK06765 197 QNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSF 276 (389)
T ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhH
Confidence 443221000000 00 00 0000000000 0 0000
Q ss_pred HHHhhhh---hccCC--------------------CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc---CCc
Q 024042 188 RTLTGLA---VSKNL--------------------DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG---KKA 241 (273)
Q Consensus 188 ~~~~~~~---~~~~~--------------------~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~ 241 (273)
..+.... +.... .......+.++..|+|+|+|+.|.++|++..+.+.+.++ +++
T Consensus 277 e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a 356 (389)
T PRK06765 277 EKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYA 356 (389)
T ss_pred HHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCe
Confidence 0110000 00000 001233445667799999999999999999999988883 368
Q ss_pred EEEEeCC-CCCCcCcCChhhHHHHHHHHhccc
Q 024042 242 RLEIIEN-TSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 242 ~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+++++++ +||..++++|+++.+.|.+||+++
T Consensus 357 ~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~~ 388 (389)
T PRK06765 357 EVYEIESINGHMAGVFDIHLFEKKIYEFLNRK 388 (389)
T ss_pred EEEEECCCCCcchhhcCHHHHHHHHHHHHccc
Confidence 9999985 899999999999999999999864
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-24 Score=157.18 Aligned_cols=220 Identities=16% Similarity=0.250 Sum_probs=153.9
Q ss_pred CCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC--CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC----CccE
Q 024042 50 KTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH--FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG----VERF 123 (273)
Q Consensus 50 ~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~i 123 (273)
.....|+++++||+-++. ..|+.+...|++. ..|+++|.|.||.|..... .+...+++|+..+++..+ ..++
T Consensus 48 ~~~~~Pp~i~lHGl~GS~-~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~-h~~~~ma~dv~~Fi~~v~~~~~~~~~ 125 (315)
T KOG2382|consen 48 NLERAPPAIILHGLLGSK-ENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITV-HNYEAMAEDVKLFIDGVGGSTRLDPV 125 (315)
T ss_pred ccCCCCceEEecccccCC-CCHHHHHHHhcccccCceEEEecccCCCCccccc-cCHHHHHHHHHHHHHHcccccccCCc
Confidence 356789999999999999 9999999999886 8999999999999985543 468889999999999884 4789
Q ss_pred EEEEeccch-HHHHHHHHhCCcccceEEEecCCCCCCCcc---hHHHhhhhhhhhhhhccCCC------------ChHHH
Q 024042 124 SVVGTSYGG-FVAYHMARMWPERVEKVVIASSGVNMKRGD---NEALVKRANLERIDHLMLPE------------SASQL 187 (273)
Q Consensus 124 ~l~G~S~Gg-~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~------------~~~~~ 187 (273)
+++|||||| .+++..+...|+.+..+|+++-........ ..................+. ....+
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~ 205 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLV 205 (315)
T ss_pred eecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHH
Confidence 999999999 788888888999999988876544211111 11111111100000000000 00000
Q ss_pred HHHhhhhhc-cCC-----------------------CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEE
Q 024042 188 RTLTGLAVS-KNL-----------------------DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARL 243 (273)
Q Consensus 188 ~~~~~~~~~-~~~-----------------------~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 243 (273)
..+....+. ... .+........+..||+++.|.++..++.+....+.+.+ +++++
T Consensus 206 ~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~f-p~~e~ 284 (315)
T KOG2382|consen 206 RQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIF-PNVEV 284 (315)
T ss_pred HHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhc-cchhe
Confidence 011110110 000 00000000223349999999999999999999999999 99999
Q ss_pred EEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 244 EIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 244 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+.++++||+.+.|+|+++.+.|.+|+.++
T Consensus 285 ~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 285 HELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred eecccCCceeecCCHHHHHHHHHHHhccc
Confidence 99999999999999999999999999875
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.9e-24 Score=163.50 Aligned_cols=246 Identities=15% Similarity=0.132 Sum_probs=148.1
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhH-hHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIW-QWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~ 100 (273)
.....+.++++||..+.+.....+ ....++|+||++||++++... ....++..|.+. |+|+++|+||+|.+.....
T Consensus 29 ~~~~~~~~~~~dg~~~~l~w~~~~--~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~ 106 (324)
T PRK10985 29 FTPYWQRLELPDGDFVDLAWSEDP--AQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLH 106 (324)
T ss_pred CCcceeEEECCCCCEEEEecCCCC--ccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCc
Confidence 345677899999988765543211 123457899999999876522 345577777776 9999999999997754322
Q ss_pred c-c---cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcc--cceEEEecCCCCCCCcch---H---HHhh
Q 024042 101 Q-R---TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPER--VEKVVIASSGVNMKRGDN---E---ALVK 168 (273)
Q Consensus 101 ~-~---~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~--v~~~v~~~~~~~~~~~~~---~---~~~~ 168 (273)
. + ..++....+..+.+.++..+++++||||||.+++.++.++++. +.++|+++++........ . .+..
T Consensus 107 ~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~ 186 (324)
T PRK10985 107 RIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQ 186 (324)
T ss_pred ceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHH
Confidence 1 1 2233223333333445667899999999999888888776543 889999998765432110 0 0000
Q ss_pred h-----hh--hhh-hhhcc--CCCChHHHHH---------HhhhhhccCC-------CCChhhHHhhhhccEEEEecCCC
Q 024042 169 R-----AN--LER-IDHLM--LPESASQLRT---------LTGLAVSKNL-------DIVPDFFFNDFVHDVLIVWGDQD 222 (273)
Q Consensus 169 ~-----~~--~~~-~~~~~--~~~~~~~~~~---------~~~~~~~~~~-------~~~~~~~~~~~~~p~l~i~g~~D 222 (273)
. .. ... ..... .......+.. .......... .......+.++..|+++|+|++|
T Consensus 187 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D 266 (324)
T PRK10985 187 RYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDD 266 (324)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCC
Confidence 0 00 000 00000 0011111110 0000000000 01122345666779999999999
Q ss_pred CCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCCh-----hhHHHHHHHHhcc
Q 024042 223 QIFPLKMATELKELLGKKARLEIIENTSHVPQIENP-----GLFNSIVKNFLRG 271 (273)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~ 271 (273)
++++.+..+.+.+.. ++.++++++++||+.+++.. ....+.+.+|++.
T Consensus 267 ~~~~~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~ 319 (324)
T PRK10985 267 PFMTHEVIPKPESLP-PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTT 319 (324)
T ss_pred CCCChhhChHHHHhC-CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHH
Confidence 999988887776666 88999999999999887642 2455667777754
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-23 Score=155.37 Aligned_cols=205 Identities=17% Similarity=0.196 Sum_probs=126.5
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccH-------HHHHHHHHHHHHH------
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTE-------LFQAASLGKLLEK------ 117 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~-------~~~~~~~~~~~~~------ 117 (273)
++.|+||++||++++. ..|..++..|.+. |.|+++|+||+|.+......... ....+++.++++.
T Consensus 25 ~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 25 TPLPTVFFYHGFTSSK-LVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCCEEEEeCCCCccc-chHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4578999999999888 7888899999876 99999999999976432211111 1223333333333
Q ss_pred hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhcc
Q 024042 118 IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSK 197 (273)
Q Consensus 118 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (273)
++.++++++|||+||.+++.++.++|+....++++++... ....... .... ....+.............
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~--- 172 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF------TSLARTL-FPPL-IPETAAQQAEFNNIVAPL--- 172 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH------HHHHHHh-cccc-cccccccHHHHHHHHHHH---
Confidence 2347899999999999999999988763333344332211 0000000 0000 000000111111111110
Q ss_pred CCCCChhhHHhhh-hccEEEEecCCCCCCChHHHHHHHHHhcC-----CcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 198 NLDIVPDFFFNDF-VHDVLIVWGDQDQIFPLKMATELKELLGK-----KARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 198 ~~~~~~~~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
....+.....++ ..|+|+++|++|.++|.+.++.+.+.+.. +.+++.++++||... + ...+.+.+||++
T Consensus 173 -~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~ 247 (249)
T PRK10566 173 -AEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQ 247 (249)
T ss_pred -hhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHh
Confidence 011122233444 46999999999999999999999988721 367788999999853 3 456888899987
Q ss_pred cC
Q 024042 272 SL 273 (273)
Q Consensus 272 ~l 273 (273)
+|
T Consensus 248 ~~ 249 (249)
T PRK10566 248 HL 249 (249)
T ss_pred hC
Confidence 65
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-23 Score=158.02 Aligned_cols=233 Identities=15% Similarity=0.100 Sum_probs=140.5
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCC----chhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcccc
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP----EAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~----~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
.+.. +|.++..+... +.+.+++.||++||+.. +. ..+..+++.|++. |.|+++|+||||.|.... .+
T Consensus 6 ~~~~-~~~~l~g~~~~----p~~~~~~~vv~i~gg~~~~~g~~-~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~ 77 (274)
T TIGR03100 6 TFSC-EGETLVGVLHI----PGASHTTGVLIVVGGPQYRVGSH-RQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LG 77 (274)
T ss_pred EEEc-CCcEEEEEEEc----CCCCCCCeEEEEeCCccccCCch-hHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CC
Confidence 3444 56666544433 11234567888887553 23 4567778888876 999999999999987543 35
Q ss_pred HHHHHHHHHHHHHHh-----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh-----h
Q 024042 104 ELFQAASLGKLLEKI-----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL-----E 173 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~-----~ 173 (273)
.....+|+.+.++.+ +.++++++|||+||.+++.++.. +.+++++|+++|.................. .
T Consensus 78 ~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (274)
T TIGR03100 78 FEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSA 156 (274)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHHHHHhCh
Confidence 555666777766665 45789999999999999999875 467999999998755332111111111100 0
Q ss_pred hh-hhccCCCC-hH-HHHHHhhhh--h--ccC-CCC--Chh---hHHhhhhccEEEEecCCCCCCChHHH------HHHH
Q 024042 174 RI-DHLMLPES-AS-QLRTLTGLA--V--SKN-LDI--VPD---FFFNDFVHDVLIVWGDQDQIFPLKMA------TELK 234 (273)
Q Consensus 174 ~~-~~~~~~~~-~~-~~~~~~~~~--~--~~~-~~~--~~~---~~~~~~~~p~l~i~g~~D~~~~~~~~------~~~~ 234 (273)
.. ........ .. ..+.+.... . ... ... ... ..+.++..|+++++|+.|...+ ... ..+.
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~ 235 (274)
T TIGR03100 157 DFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWR 235 (274)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhH
Confidence 01 11111100 00 011111100 0 000 000 111 1233556699999999998863 222 4445
Q ss_pred HHhc-CCcEEEEeCCCCCCcCcC-ChhhHHHHHHHHhcc
Q 024042 235 ELLG-KKARLEIIENTSHVPQIE-NPGLFNSIVKNFLRG 271 (273)
Q Consensus 235 ~~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 271 (273)
+.+. +++++..+++++|+...+ .++++.+.|.+||++
T Consensus 236 ~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 236 GALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred HHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 5443 789999999999988555 558999999999964
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-23 Score=146.78 Aligned_cols=180 Identities=17% Similarity=0.232 Sum_probs=123.5
Q ss_pred CeEEEEcCCCCchhHhHHH--HHHhhcC---CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEec
Q 024042 55 PSLVLIHGFGPEAIWQWRK--QVQFFAP---HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTS 129 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~~~~--~~~~l~~---~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S 129 (273)
|+||++||++++. ..|.. +.+.+.+ +|+|+++|+||++ ++.++++.++++.++.++++++|||
T Consensus 2 p~illlHGf~ss~-~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~~~~~~lvG~S 69 (190)
T PRK11071 2 STLLYLHGFNSSP-RSAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEHGGDPLGLVGSS 69 (190)
T ss_pred CeEEEECCCCCCc-chHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHcCCCCeEEEEEC
Confidence 6899999999998 77763 3455543 5999999999874 3577888999999988999999999
Q ss_pred cchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc---CCCChHHHHHHhhhhhccCCCCChhhH
Q 024042 130 YGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM---LPESASQLRTLTGLAVSKNLDIVPDFF 206 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (273)
+||.+|+.++.++|. .+|+++|+.... ..+....... ..... .......+...... ....
T Consensus 70 ~Gg~~a~~~a~~~~~---~~vl~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~--------~~~~- 132 (190)
T PRK11071 70 LGGYYATWLSQCFML---PAVVVNPAVRPF----ELLTDYLGEN-ENPYTGQQYVLESRHIYDLKVM--------QIDP- 132 (190)
T ss_pred HHHHHHHHHHHHcCC---CEEEECCCCCHH----HHHHHhcCCc-ccccCCCcEEEcHHHHHHHHhc--------CCcc-
Confidence 999999999999883 468888865521 1111111100 00000 00011111111100 0011
Q ss_pred HhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 207 FNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 207 ~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
. +...|+++++|++|+++|.+.+.++++. ++.+.++|++|.+ .+.++..+.+.+|++
T Consensus 133 i-~~~~~v~iihg~~De~V~~~~a~~~~~~----~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 133 L-ESPDLIWLLQQTGDEVLDYRQAVAYYAA----CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred C-CChhhEEEEEeCCCCcCCHHHHHHHHHh----cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 1 2444889999999999999999999874 4666889999986 445888899999975
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-23 Score=144.15 Aligned_cols=221 Identities=17% Similarity=0.201 Sum_probs=153.5
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCcccc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
+..++.+.|.++++.|..- .+.+.|+++++|+..++- ...-..++-+-. +.+|+.+++||+|.|.+.+....
T Consensus 55 e~i~l~T~D~vtL~a~~~~-----~E~S~pTlLyfh~NAGNm-Ghr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~G 128 (300)
T KOG4391|consen 55 ERIELRTRDKVTLDAYLML-----SESSRPTLLYFHANAGNM-GHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEG 128 (300)
T ss_pred eEEEEEcCcceeEeeeeec-----ccCCCceEEEEccCCCcc-cchhhHHHHHHHHcCceEEEEEeeccccCCCCccccc
Confidence 4556667799999876653 356899999999988877 444444443333 38999999999999998887665
Q ss_pred HHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccC
Q 024042 104 ELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML 180 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (273)
..-.++.+.+.+-.- +..+++++|.|.||.+|..+|++..+++.++|+-+.....+.... ..+.
T Consensus 129 L~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i-------------~~v~ 195 (300)
T KOG4391|consen 129 LKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAI-------------PLVF 195 (300)
T ss_pred eeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhh-------------heec
Confidence 555555554444322 347899999999999999999999999999999988766532210 1111
Q ss_pred CCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCCCCCCcCcCChh
Q 024042 181 PESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTSHVPQIENPG 259 (273)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~ 259 (273)
+.....+..+.... .|.......+...|.|++.|.+|.++|+-..+.+++.++ ...++..+|++.|.-..- -+
T Consensus 196 p~~~k~i~~lc~kn-----~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~d 269 (300)
T KOG4391|consen 196 PFPMKYIPLLCYKN-----KWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CD 269 (300)
T ss_pred cchhhHHHHHHHHh-----hhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-ec
Confidence 11111222221111 111112222444499999999999999999999999984 567899999999975433 23
Q ss_pred hHHHHHHHHhcc
Q 024042 260 LFNSIVKNFLRG 271 (273)
Q Consensus 260 ~~~~~i~~fl~~ 271 (273)
-..++|.+||.+
T Consensus 270 GYfq~i~dFlaE 281 (300)
T KOG4391|consen 270 GYFQAIEDFLAE 281 (300)
T ss_pred cHHHHHHHHHHH
Confidence 567888999875
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-23 Score=146.53 Aligned_cols=213 Identities=17% Similarity=0.152 Sum_probs=149.8
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCcc
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQ 101 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~ 101 (273)
..+-..+++..|..+...... +.....+++++.||...+. .....+...|+. +++++.+|++|+|.|.+.+..
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~----~~~~~~~~lly~hGNa~Dl-gq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE 108 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVR----PPEAAHPTLLYSHGNAADL-GQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE 108 (258)
T ss_pred ccceEEeecCCCCEEEEEEEc----CccccceEEEEcCCcccch-HHHHHHHHHHhhcccceEEEEecccccccCCCccc
Confidence 344455566555554433332 2234568999999987766 444455556655 499999999999999998887
Q ss_pred ccHHHHHHHHHHHHHHhC--CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc
Q 024042 102 RTELFQAASLGKLLEKIG--VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM 179 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (273)
....+.++.+.+.++.-. .++++|+|+|+|+..++.+|.+.| +.++|+.+|.........
T Consensus 109 ~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~---------------- 170 (258)
T KOG1552|consen 109 RNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAF---------------- 170 (258)
T ss_pred ccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhc----------------
Confidence 777766777777666543 588999999999999999999988 999999998655322100
Q ss_pred CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChh
Q 024042 180 LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPG 259 (273)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 259 (273)
+. .... +....+....-.+.+.+|+|++||++|++++....+++.+..+...+-.++.|+||....-.|
T Consensus 171 -~~--------~~~~-~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~- 239 (258)
T KOG1552|consen 171 -PD--------TKTT-YCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYP- 239 (258)
T ss_pred -cC--------cceE-EeeccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCH-
Confidence 00 0000 000000113334566669999999999999999999999999555688889999998755444
Q ss_pred hHHHHHHHHhc
Q 024042 260 LFNSIVKNFLR 270 (273)
Q Consensus 260 ~~~~~i~~fl~ 270 (273)
++.+.+.+|+.
T Consensus 240 ~yi~~l~~f~~ 250 (258)
T KOG1552|consen 240 EYIEHLRRFIS 250 (258)
T ss_pred HHHHHHHHHHH
Confidence 56677777775
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-22 Score=168.11 Aligned_cols=238 Identities=21% Similarity=0.225 Sum_probs=159.3
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHHHhhcCC-CeEEeecCCCCCCCC---C
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQFFAPH-FNVYVPDLIFFGHST---T 97 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~---~ 97 (273)
...+..++...||.++++|...|.+..+.++-|+||++||.+... ...+....+.|+.. |.|+.+|+||.+.-. .
T Consensus 363 ~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~ 442 (620)
T COG1506 363 AEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFA 442 (620)
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHH
Confidence 344666777779999999999866555445569999999986444 12355566667666 999999999754321 1
Q ss_pred -----CCccccHHHHHHHHHHHHHHhC---CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhh
Q 024042 98 -----RSIQRTELFQAASLGKLLEKIG---VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169 (273)
Q Consensus 98 -----~~~~~~~~~~~~~~~~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~ 169 (273)
.......++..+.+. +++..+ .+++.++|||+||.+++.++.+.+ .+++.+...+...........-...
T Consensus 443 ~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~ 520 (620)
T COG1506 443 DAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGL 520 (620)
T ss_pred HhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhh
Confidence 122235555555555 454443 368999999999999999999987 6888887777555332111000000
Q ss_pred hhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEe
Q 024042 170 ANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEII 246 (273)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~ 246 (273)
... .......... .... .....|.....++.+|+|+|||++|..||.+++..+.+.+ +.+++++++
T Consensus 521 ~~~--~~~~~~~~~~-~~~~--------~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~ 589 (620)
T COG1506 521 RFD--PEENGGGPPE-DREK--------YEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVF 589 (620)
T ss_pred cCC--HHHhCCCccc-ChHH--------HHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEe
Confidence 000 0000000000 0000 1133677778888889999999999999999999998887 467899999
Q ss_pred CCCCCCcCc-CChhhHHHHHHHHhcccC
Q 024042 247 ENTSHVPQI-ENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 247 ~~~gH~~~~-~~~~~~~~~i~~fl~~~l 273 (273)
|+.+|.+.. ++...+.+.+.+|+++++
T Consensus 590 p~e~H~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 590 PDEGHGFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred CCCCcCCCCchhHHHHHHHHHHHHHHHh
Confidence 999998655 556678888889988764
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-22 Score=156.32 Aligned_cols=240 Identities=14% Similarity=0.218 Sum_probs=146.8
Q ss_pred CCceeEEecC-CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHh-----HHHHHHhhcCC-CeEEeecCCCCCCCC
Q 024042 24 GLSSQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQ-----WRKQVQFFAPH-FNVYVPDLIFFGHST 96 (273)
Q Consensus 24 ~~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~-----~~~~~~~l~~~-~~v~~~d~~g~g~s~ 96 (273)
+.++..+... ++..++.+... .....+++||++||+..+. .. ++.+++.|.+. |+|+++|++|+|.+.
T Consensus 35 ~~~~~~~v~~~~~~~l~~~~~~----~~~~~~~pvl~v~~~~~~~-~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~ 109 (350)
T TIGR01836 35 GVTPKEVVYREDKVVLYRYTPV----KDNTHKTPLLIVYALVNRP-YMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRAD 109 (350)
T ss_pred CCCCCceEEEcCcEEEEEecCC----CCcCCCCcEEEeccccccc-eeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHH
Confidence 4445555443 44455444321 1123456799999975444 33 35788888776 999999999998775
Q ss_pred CCCccccHHHH-----HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH--HHh--
Q 024042 97 TRSIQRTELFQ-----AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE--ALV-- 167 (273)
Q Consensus 97 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~--~~~-- 167 (273)
... +.+++ .+.+..+.+..+.++++++||||||.+++.++..+|++++++|+++++......... ...
T Consensus 110 ~~~---~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~ 186 (350)
T TIGR01836 110 RYL---TLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARH 186 (350)
T ss_pred hcC---CHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccc
Confidence 332 33333 333445555567789999999999999999999999999999999988765432100 000
Q ss_pred -------hhhh-h-----hhhhhccCC---------------CChHH---------------------HHHHhhhhhccC
Q 024042 168 -------KRAN-L-----ERIDHLMLP---------------ESASQ---------------------LRTLTGLAVSKN 198 (273)
Q Consensus 168 -------~~~~-~-----~~~~~~~~~---------------~~~~~---------------------~~~~~~~~~~~~ 198 (273)
.... . ......+.+ ..... ........+...
T Consensus 187 ~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n 266 (350)
T TIGR01836 187 VDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQN 266 (350)
T ss_pred cCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcC
Confidence 0000 0 000000000 00100 011111110000
Q ss_pred CCCC-------hhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCCCCCCcCcCC---hhhHHHHHHH
Q 024042 199 LDIV-------PDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTSHVPQIEN---PGLFNSIVKN 267 (273)
Q Consensus 199 ~~~~-------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~---~~~~~~~i~~ 267 (273)
.... ....+.++.+|+++++|++|.++|++.++.+.+.++ .+.++++++ +||...+.+ ++++.+.|.+
T Consensus 267 ~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~ 345 (350)
T TIGR01836 267 GLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGK 345 (350)
T ss_pred cccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHH
Confidence 0000 011244567799999999999999999999999883 356777787 799866543 4789999999
Q ss_pred Hhccc
Q 024042 268 FLRGS 272 (273)
Q Consensus 268 fl~~~ 272 (273)
||+++
T Consensus 346 wl~~~ 350 (350)
T TIGR01836 346 WLQAR 350 (350)
T ss_pred HHHhC
Confidence 99764
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-22 Score=155.93 Aligned_cols=249 Identities=17% Similarity=0.168 Sum_probs=156.8
Q ss_pred hCCCceeEEecCCcceEEeecCCccCC-CCCCCCCeEEEEcCCCCchhHhHH------HHHHhhcCC-CeEEeecCCCCC
Q 024042 22 SAGLSSQTIDIDDETTLHFWGPKLEDD-HKTLKKPSLVLIHGFGPEAIWQWR------KQVQFFAPH-FNVYVPDLIFFG 93 (273)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~~~~~~vi~~hG~~~~~~~~~~------~~~~~l~~~-~~v~~~d~~g~g 93 (273)
....+.+.++++||..|.....+.... ....++|+|+++||++.++ ..|. .++..|++. |+|+++|+||++
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss-~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAG-DAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccc-cceeecCcccchHHHHHhCCCCcccccccccc
Confidence 445688899999999999887642211 1123468999999998777 6663 344556665 999999999987
Q ss_pred CCCCC------Cc---cccHHHHH-HHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCc---ccceEEEecCCCC
Q 024042 94 HSTTR------SI---QRTELFQA-ASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPE---RVEKVVIASSGVN 157 (273)
Q Consensus 94 ~s~~~------~~---~~~~~~~~-~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~---~v~~~v~~~~~~~ 157 (273)
.|.+. .. ..+.++.+ .|+.++++.+ ..++++++|||+||.+++.++ .+|+ +++.+++++|...
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh
Confidence 65321 11 24566666 6888888876 347899999999999998555 4565 5888888888764
Q ss_pred CCCcchHHH---hh-----h---hhh----------hhhhh--------------ccC--------------------CC
Q 024042 158 MKRGDNEAL---VK-----R---ANL----------ERIDH--------------LML--------------------PE 182 (273)
Q Consensus 158 ~~~~~~~~~---~~-----~---~~~----------~~~~~--------------~~~--------------------~~ 182 (273)
......... .. . .+. ..+.. .+. ..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagt 278 (395)
T PLN02872 199 LDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPS 278 (395)
T ss_pred hccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcc
Confidence 422111000 00 0 000 00000 000 00
Q ss_pred ChHHHHHHhhh---hhccC-------------CCCChhhHHhhh--hccEEEEecCCCCCCChHHHHHHHHHhcCCcEEE
Q 024042 183 SASQLRTLTGL---AVSKN-------------LDIVPDFFFNDF--VHDVLIVWGDQDQIFPLKMATELKELLGKKARLE 244 (273)
Q Consensus 183 ~~~~~~~~~~~---~~~~~-------------~~~~~~~~~~~~--~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 244 (273)
+...+.-+.+. ..+.. ....|.+.+.++ ..|+++++|++|.+++++.++.+.+.++...+++
T Consensus 279 S~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~ 358 (395)
T PLN02872 279 SVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELL 358 (395)
T ss_pred hHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEE
Confidence 00000000000 00000 011233334444 2499999999999999999999999983336888
Q ss_pred EeCCCCCC---cCcCChhhHHHHHHHHhccc
Q 024042 245 IIENTSHV---PQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 245 ~~~~~gH~---~~~~~~~~~~~~i~~fl~~~ 272 (273)
.+++.+|. ...+.|+++.+.|.+|+++.
T Consensus 359 ~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 359 YLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred EcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 99999995 34578999999999999764
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.9e-22 Score=141.74 Aligned_cols=123 Identities=20% Similarity=0.295 Sum_probs=98.1
Q ss_pred ceeEEecCCcc-eEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC--CeEEeecCCCCCCCCCCCc-c
Q 024042 26 SSQTIDIDDET-TLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH--FNVYVPDLIFFGHSTTRSI-Q 101 (273)
Q Consensus 26 ~~~~~~~~~g~-~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~-~ 101 (273)
+...+.++++. ++..|... ++....|.+++.||+|.+. ..|..++..+... .+|+++|+||||++..... +
T Consensus 49 ekedv~i~~~~~t~n~Y~t~----~~~t~gpil~l~HG~G~S~-LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~d 123 (343)
T KOG2564|consen 49 EKEDVSIDGSDLTFNVYLTL----PSATEGPILLLLHGGGSSA-LSFAIFASELKSKIRCRCLALDLRGHGETKVENEDD 123 (343)
T ss_pred cccccccCCCcceEEEEEec----CCCCCccEEEEeecCcccc-hhHHHHHHHHHhhcceeEEEeeccccCccccCChhh
Confidence 34566774333 56666655 3467889999999999998 9999999988776 7889999999999986554 4
Q ss_pred ccHHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHh--CCcccceEEEecC
Q 024042 102 RTELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARM--WPERVEKVVIASS 154 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~--~~~~v~~~v~~~~ 154 (273)
.+.+.++.|+.++++.+ ...+|+|+||||||.+|...|.. .|. +.++++++-
T Consensus 124 lS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 124 LSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred cCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 58899999999999887 23679999999999999887764 355 888888774
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.5e-22 Score=135.62 Aligned_cols=142 Identities=24% Similarity=0.312 Sum_probs=110.0
Q ss_pred eEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHH-H-HhCCccEEEEEeccch
Q 024042 56 SLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLL-E-KIGVERFSVVGTSYGG 132 (273)
Q Consensus 56 ~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~l~G~S~Gg 132 (273)
+||++||++++. ..|..+.+.|.+. |.|+.+|+|++|.+.... ..+++.+.+ + ..+.++++++|||+||
T Consensus 1 ~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 72 (145)
T PF12695_consen 1 VVVLLHGWGGSR-RDYQPLAEALAEQGYAVVAFDYPGHGDSDGAD-------AVERVLADIRAGYPDPDRIILIGHSMGG 72 (145)
T ss_dssp EEEEECTTTTTT-HHHHHHHHHHHHTTEEEEEESCTTSTTSHHSH-------HHHHHHHHHHHHHCTCCEEEEEEETHHH
T ss_pred CEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEecCCCCccchhH-------HHHHHHHHHHhhcCCCCcEEEEEEccCc
Confidence 589999999998 8899999999887 999999999999872111 222222222 2 2366899999999999
Q ss_pred HHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhc
Q 024042 133 FVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVH 212 (273)
Q Consensus 133 ~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (273)
.+++.++.+. .+++++|++++... .....+...
T Consensus 73 ~~a~~~~~~~-~~v~~~v~~~~~~~----------------------------------------------~~~~~~~~~ 105 (145)
T PF12695_consen 73 AIAANLAARN-PRVKAVVLLSPYPD----------------------------------------------SEDLAKIRI 105 (145)
T ss_dssp HHHHHHHHHS-TTESEEEEESESSG----------------------------------------------CHHHTTTTS
T ss_pred HHHHHHhhhc-cceeEEEEecCccc----------------------------------------------hhhhhccCC
Confidence 9999999988 67999999998200 001112222
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCC
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHV 252 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 252 (273)
|+++++|++|..++.+..+.+.+.++.+.+++++++++|+
T Consensus 106 pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 106 PVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp EEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred cEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 9999999999999999999999999557999999999996
|
... |
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-23 Score=151.94 Aligned_cols=184 Identities=27% Similarity=0.367 Sum_probs=126.1
Q ss_pred CeEEeecCCCCCCCCC----CCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCC-
Q 024042 82 FNVYVPDLIFFGHSTT----RSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV- 156 (273)
Q Consensus 82 ~~v~~~d~~g~g~s~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~- 156 (273)
|+|+++|+||+|.|++ ....++.++.++++..+++.++.++++++||||||.+++.++..+|++|+++|+++++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 6899999999999994 34567999999999999999999999999999999999999999999999999999862
Q ss_pred ---CCCCcchHH--Hhhhhh---h-----------hhhh-------hccCCCChHH--HHHHhh--------hhh----c
Q 024042 157 ---NMKRGDNEA--LVKRAN---L-----------ERID-------HLMLPESASQ--LRTLTG--------LAV----S 196 (273)
Q Consensus 157 ---~~~~~~~~~--~~~~~~---~-----------~~~~-------~~~~~~~~~~--~~~~~~--------~~~----~ 196 (273)
......... ...... . .... .......... ...... ... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNALG 160 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcccccc
Confidence 000000000 000000 0 0000 0000000000 000000 000 0
Q ss_pred cCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHH
Q 024042 197 KNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVK 266 (273)
Q Consensus 197 ~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 266 (273)
....+.......++..|+++++|++|.++|.+....+.+.+ ++.++++++++||+.+.++|+++.+.|.
T Consensus 161 ~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 161 YFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI-PNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS-TTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc-CCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 00011112233456669999999999999999999999888 9999999999999999999999988875
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.87 E-value=8e-21 Score=138.48 Aligned_cols=190 Identities=21% Similarity=0.234 Sum_probs=119.2
Q ss_pred HHHHHHhhcCC-CeEEeecCCCCCCCCCC--------CccccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHH
Q 024042 71 WRKQVQFFAPH-FNVYVPDLIFFGHSTTR--------SIQRTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMA 139 (273)
Q Consensus 71 ~~~~~~~l~~~-~~v~~~d~~g~g~s~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a 139 (273)
|......|++. |.|+.+|+||.+..... ......++..+.+..+++.. +.+++.++|+|+||++++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 34456677555 99999999987743211 11123333333333333332 448999999999999999999
Q ss_pred HhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCC-CChHHHHHHhhhhhccCCCCChhhHHhh--hhccEEE
Q 024042 140 RMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLP-ESASQLRTLTGLAVSKNLDIVPDFFFND--FVHDVLI 216 (273)
Q Consensus 140 ~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~l~ 216 (273)
.++|+++++++..++..+........-. ...........+ ........... .....+ ...|+|+
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~-----------~~~~~~~~~~~P~li 149 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI--YTKAEYLEYGDPWDNPEFYRELSP-----------ISPADNVQIKPPVLI 149 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC--HHHGHHHHHSSTTTSHHHHHHHHH-----------GGGGGGCGGGSEEEE
T ss_pred cccceeeeeeeccceecchhcccccccc--cccccccccCccchhhhhhhhhcc-----------ccccccccCCCCEEE
Confidence 9999999999999988776544322100 110011111111 12222222211 112222 5569999
Q ss_pred EecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcC-cCChhhHHHHHHHHhcccC
Q 024042 217 VWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQ-IENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 217 i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~l 273 (273)
++|++|..||.+.+..+.+.+ +.+.+++++|++||.+. .++..++.+.+.+||+++|
T Consensus 150 ~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 150 IHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYL 210 (213)
T ss_dssp EEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred EccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHc
Confidence 999999999999999988887 45699999999999644 3445578888899998764
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-20 Score=137.28 Aligned_cols=173 Identities=18% Similarity=0.219 Sum_probs=113.2
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCC-----------Cccc---cHHHHHHHHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTR-----------SIQR---TELFQAASLGKLL 115 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~-----------~~~~---~~~~~~~~~~~~~ 115 (273)
.+..|+||++||+|++. ..|..+.+.|.+. +.+..++.+|...+... .... ......+.+.+.+
T Consensus 13 ~~~~~~vIlLHG~G~~~-~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNP-VAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCCcEEEEEeCCCCCh-HHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 45678999999999999 8899999988765 44555555554321100 0001 1122222333333
Q ss_pred H----HhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHH
Q 024042 116 E----KIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRT 189 (273)
Q Consensus 116 ~----~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (273)
+ ..+. ++++++|+|+||.+++.++.++|+.+.+++.+++..... +..
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~---------------------~~~------ 144 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL---------------------PET------ 144 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc---------------------ccc------
Confidence 3 3333 689999999999999999999888778777776532100 000
Q ss_pred HhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhhHHHHHH
Q 024042 190 LTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGLFNSIVK 266 (273)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 266 (273)
.....|++++||++|.++|.+.++.+.+.+ +.+++++.++++||.+..+.-+.+.+.+.
T Consensus 145 ------------------~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 145 ------------------APTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred ------------------ccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 001239999999999999999998888877 34678899999999985443344444444
Q ss_pred HHh
Q 024042 267 NFL 269 (273)
Q Consensus 267 ~fl 269 (273)
++|
T Consensus 207 ~~l 209 (232)
T PRK11460 207 YTV 209 (232)
T ss_pred HHc
Confidence 443
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.9e-20 Score=130.33 Aligned_cols=214 Identities=13% Similarity=0.091 Sum_probs=149.0
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHH-HhCCccEEEEEec
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLE-KIGVERFSVVGTS 129 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~G~S 129 (273)
...++.++++|-.|+++ ..|+.+...|.....++++++||+|.....+...+++..++.+...+. -..-+++.++|||
T Consensus 4 ~~~~~~L~cfP~AGGsa-~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 4 PGARLRLFCFPHAGGSA-SLFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCCCceEEEecCCCCCH-HHHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 45677899999989998 899999999988899999999999998888888899999999988887 3444789999999
Q ss_pred cchHHHHHHHHhCCc---ccceEEEecCCCCCCCc-------chHHHhhhhh-hhhhhhccCCCChHHH---HHHhhhhh
Q 024042 130 YGGFVAYHMARMWPE---RVEKVVIASSGVNMKRG-------DNEALVKRAN-LERIDHLMLPESASQL---RTLTGLAV 195 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~~---~v~~~v~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~ 195 (273)
|||++|.++|.+... .+.++.+.+...+.... ....+..... .......+. .+++.. ....+..+
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~l-ed~El~~l~LPilRAD~ 161 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELL-EDPELMALFLPILRADF 161 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHh-cCHHHHHHHHHHHHHHH
Confidence 999999999987522 25666666554431111 1112211111 101110000 111111 11111111
Q ss_pred ccC--CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 196 SKN--LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 196 ~~~--~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.-. ....+ ...+.+|+.++.|++|..+..+....|.+..+...++..++ +||++..++.+++.+.|.+.+.
T Consensus 162 ~~~e~Y~~~~---~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 162 RALESYRYPP---PAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred HHhcccccCC---CCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-CcceehhhhHHHHHHHHHHHhh
Confidence 000 00001 13455699999999999999999999999997799999998 7999999999999999988874
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-19 Score=145.11 Aligned_cols=206 Identities=15% Similarity=0.120 Sum_probs=131.9
Q ss_pred CCCCeEEEEcCCCCchhHhHH-----HHHHhhcCC-CeEEeecCCCCCCCCCCC--ccccHHHHHHHHHHHHHHhCCccE
Q 024042 52 LKKPSLVLIHGFGPEAIWQWR-----KQVQFFAPH-FNVYVPDLIFFGHSTTRS--IQRTELFQAASLGKLLEKIGVERF 123 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~-----~~~~~l~~~-~~v~~~d~~g~g~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~i 123 (273)
..+++||++||+.... ..+. .+++.|.++ |+|+++|++|+|.+.... .++..+...+.+..+++..+.+++
T Consensus 186 ~~~~PlLiVp~~i~k~-yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv 264 (532)
T TIGR01838 186 VHKTPLLIVPPWINKY-YILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQV 264 (532)
T ss_pred CCCCcEEEECcccccc-eeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCe
Confidence 3578999999987666 5553 678888766 999999999999886432 233444556667777777888999
Q ss_pred EEEEeccchHHHH----HHHHhC-CcccceEEEecCCCCCCCcchHHH-h---------hhhhh---------hhhhhcc
Q 024042 124 SVVGTSYGGFVAY----HMARMW-PERVEKVVIASSGVNMKRGDNEAL-V---------KRANL---------ERIDHLM 179 (273)
Q Consensus 124 ~l~G~S~Gg~~a~----~~a~~~-~~~v~~~v~~~~~~~~~~~~~~~~-~---------~~~~~---------~~~~~~~ 179 (273)
+++|||+||.++. .++... ++++++++++++..++........ . ..... ......+
T Consensus 265 ~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~l 344 (532)
T TIGR01838 265 NCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLL 344 (532)
T ss_pred EEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhc
Confidence 9999999999852 244454 778999999998877654321100 0 00000 0000000
Q ss_pred CCC---------------C-----------------hHHHHHHhhhhhccCCCC-------ChhhHHhhhhccEEEEecC
Q 024042 180 LPE---------------S-----------------ASQLRTLTGLAVSKNLDI-------VPDFFFNDFVHDVLIVWGD 220 (273)
Q Consensus 180 ~~~---------------~-----------------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~p~l~i~g~ 220 (273)
.+. . ......++...+..+... .....+.++..|++++.|+
T Consensus 345 rp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~ 424 (532)
T TIGR01838 345 RENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATR 424 (532)
T ss_pred ChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeC
Confidence 000 0 000111111111111000 0111233444599999999
Q ss_pred CCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChh
Q 024042 221 QDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPG 259 (273)
Q Consensus 221 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 259 (273)
+|.++|.+.++.+.+.+ ++.+..+++++||..++++|.
T Consensus 425 ~D~IvP~~sa~~l~~~i-~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 425 EDHIAPWQSAYRGAALL-GGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CCCcCCHHHHHHHHHHC-CCCEEEEECCCCCchHhhCCC
Confidence 99999999999999998 688888999999998877663
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-20 Score=127.01 Aligned_cols=215 Identities=22% Similarity=0.224 Sum_probs=140.1
Q ss_pred CCCCCeEEEEcCCCCchhHh-HHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC-cc--EEE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQ-WRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV-ER--FSV 125 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~-~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~--i~l 125 (273)
.++...+|++||+-++.... ...++..|.+. +.++.+|++|.|.|............++|+..+++++.. .+ -++
T Consensus 30 tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred cCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEE
Confidence 35677999999998877333 44567788777 999999999999999776655666667999999998843 33 368
Q ss_pred EEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccC--CC----ChHHHHHHhhhhhccCC
Q 024042 126 VGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML--PE----SASQLRTLTGLAVSKNL 199 (273)
Q Consensus 126 ~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~ 199 (273)
+|||-||.+++.++.++.+ +.-+|.+++-.+........+....-.......+. +. ....+... ....+-..
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~e-SlmdrLnt 187 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEE-SLMDRLNT 187 (269)
T ss_pred EeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHH-HHHHHHhc
Confidence 9999999999999999987 88888887766654332111111110000000000 00 00000000 00000001
Q ss_pred CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHh
Q 024042 200 DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFL 269 (273)
Q Consensus 200 ~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 269 (273)
+..+....-+..+|||-+||..|.+||.+.+..+++.+ ++.++.++||++|.....+ .+.......|.
T Consensus 188 d~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i-~nH~L~iIEgADHnyt~~q-~~l~~lgl~f~ 255 (269)
T KOG4667|consen 188 DIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKII-PNHKLEIIEGADHNYTGHQ-SQLVSLGLEFI 255 (269)
T ss_pred hhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhc-cCCceEEecCCCcCccchh-hhHhhhcceeE
Confidence 11222223344569999999999999999999999999 8899999999999865432 23334444443
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.4e-19 Score=134.56 Aligned_cols=226 Identities=26% Similarity=0.384 Sum_probs=144.7
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC---CCeEEeecCCCCCCCCCCCccccHHHHHHH
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP---HFNVYVPDLIFFGHSTTRSIQRTELFQAAS 110 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~---~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 110 (273)
.+..+.|...+ .. .|+++++||++++. ..|......+.. .|+++.+|+||||.|. .. .......+++
T Consensus 8 ~~~~~~~~~~~------~~-~~~i~~~hg~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~ 77 (282)
T COG0596 8 DGVRLAYREAG------GG-GPPLVLLHGFPGSS-SVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADD 77 (282)
T ss_pred CCeEEEEeecC------CC-CCeEEEeCCCCCch-hhhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHH
Confidence 44556666664 11 56999999999888 777763222222 2899999999999997 22 2344444899
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC-----------CCcchHHHhh---hh---hhh
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM-----------KRGDNEALVK---RA---NLE 173 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~-----------~~~~~~~~~~---~~---~~~ 173 (273)
+..+++.++..+++++|||+||.++..++.++|+++++++++++.... .......... .. ...
T Consensus 78 ~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
T COG0596 78 LAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFA 157 (282)
T ss_pred HHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhh
Confidence 999999999888999999999999999999999999999999976541 1000000000 00 000
Q ss_pred hh------hhcc--------CCC----ChHHHHHHhhhh----hccC-CCC---ChhhHHhhhhccEEEEecCCCCCCCh
Q 024042 174 RI------DHLM--------LPE----SASQLRTLTGLA----VSKN-LDI---VPDFFFNDFVHDVLIVWGDQDQIFPL 227 (273)
Q Consensus 174 ~~------~~~~--------~~~----~~~~~~~~~~~~----~~~~-~~~---~~~~~~~~~~~p~l~i~g~~D~~~~~ 227 (273)
.. .... ... ............ .... ... ........+..|+++++|++|.+.|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~ 237 (282)
T COG0596 158 ALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPA 237 (282)
T ss_pred hhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCH
Confidence 00 0000 000 000000000000 0000 000 11123344456999999999977776
Q ss_pred HHHHHHHHHhcCC-cEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 228 KMATELKELLGKK-ARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 228 ~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.....+.+.. ++ .++.+++++||+.+.++|+.+.+.+.+|++
T Consensus 238 ~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 238 ELARRLAAAL-PNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred HHHHHHHhhC-CCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 6666666666 64 899999999999999999999999888554
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=136.96 Aligned_cols=203 Identities=16% Similarity=0.116 Sum_probs=121.4
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH---HHHhhcCC-CeEEeecCCCCCCC-----CC-----CC
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK---QVQFFAPH-FNVYVPDLIFFGHS-----TT-----RS 99 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~---~~~~l~~~-~~v~~~d~~g~g~s-----~~-----~~ 99 (273)
-|..+.|..+-|+. ....+.|+|+++||++++. ..|.. +...+... +.|+.+|..++|.. .. ..
T Consensus 28 l~~~~~~~vy~P~~-~~~~~~Pvv~~lHG~~~~~-~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~ 105 (283)
T PLN02442 28 LGCSMTFSVYFPPA-SDSGKVPVLYWLSGLTCTD-ENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGA 105 (283)
T ss_pred cCCceEEEEEcCCc-ccCCCCCEEEEecCCCcCh-HHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCc
Confidence 45567776654431 2245679999999998887 55543 33455554 99999998766511 00 00
Q ss_pred --------c--------cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch
Q 024042 100 --------I--------QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN 163 (273)
Q Consensus 100 --------~--------~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~ 163 (273)
. .+..++..+.+....+.++.++++++||||||..|+.++.++|+++++++.+++.........
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~ 185 (283)
T PLN02442 106 GFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPW 185 (283)
T ss_pred ceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCch
Confidence 0 011223333444444445778899999999999999999999999999999998765331110
Q ss_pred HHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChH-HHHHHHHHh---cC
Q 024042 164 EALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLK-MATELKELL---GK 239 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~-~~~~~~~~~---~~ 239 (273)
. .. .....+.. ........ ....+.........|+++++|++|.+++.. ..+.+.+.+ +.
T Consensus 186 ~--~~-----~~~~~~g~-~~~~~~~~--------d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~ 249 (283)
T PLN02442 186 G--QK-----AFTNYLGS-DKADWEEY--------DATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGA 249 (283)
T ss_pred h--hH-----HHHHHcCC-ChhhHHHc--------ChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCC
Confidence 0 00 01111111 11111110 011111112234559999999999998863 244444433 46
Q ss_pred CcEEEEeCCCCCCcC
Q 024042 240 KARLEIIENTSHVPQ 254 (273)
Q Consensus 240 ~~~~~~~~~~gH~~~ 254 (273)
+++++++++.+|...
T Consensus 250 ~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 250 PVTLRLQPGYDHSYF 264 (283)
T ss_pred CeEEEEeCCCCccHH
Confidence 789999999999754
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.9e-20 Score=136.72 Aligned_cols=127 Identities=16% Similarity=0.129 Sum_probs=95.7
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch---hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcccc
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA---IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~---~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
.+++.+.|..+.++..+ ...+.+++||++||++... ...|..+++.|++. |.|+.+|+||||.|.......+
T Consensus 3 ~~l~~~~g~~~~~~~~p----~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~ 78 (266)
T TIGR03101 3 FFLDAPHGFRFCLYHPP----VAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAAR 78 (266)
T ss_pred EEecCCCCcEEEEEecC----CCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCC
Confidence 35566666655444432 2233467999999988642 25677788888765 9999999999999976554456
Q ss_pred HHHHHHHHHHHH---HHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 104 ELFQAASLGKLL---EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 104 ~~~~~~~~~~~~---~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
...+.+|+..++ ++.+.++++++||||||.+++.++.++|++++++|+++|....
T Consensus 79 ~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g 136 (266)
T TIGR03101 79 WDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSG 136 (266)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccch
Confidence 666677766654 4445689999999999999999999999999999999987653
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.85 E-value=7e-19 Score=132.83 Aligned_cols=216 Identities=17% Similarity=0.114 Sum_probs=129.2
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHH--HHhhc-C-CCeEEeecC--CCCCCCCCC---------
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQ--VQFFA-P-HFNVYVPDL--IFFGHSTTR--------- 98 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~--~~~l~-~-~~~v~~~d~--~g~g~s~~~--------- 98 (273)
.+..+.|..+.|+.. ...+.|+|+++||++++. ..|... ...+. + ++.|+++|. +|+|.+...
T Consensus 23 ~~~~~~~~v~~P~~~-~~~~~P~vvllHG~~~~~-~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~ 100 (275)
T TIGR02821 23 CGVPMTFGVFLPPQA-AAGPVPVLWYLSGLTCTH-ENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGA 100 (275)
T ss_pred cCCceEEEEEcCCCc-cCCCCCEEEEccCCCCCc-cHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCc
Confidence 566667777664321 134579999999999887 666432 23343 3 499999998 454432210
Q ss_pred -----------Ccccc-HHHHHHHHHHHHHH---hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch
Q 024042 99 -----------SIQRT-ELFQAASLGKLLEK---IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN 163 (273)
Q Consensus 99 -----------~~~~~-~~~~~~~~~~~~~~---~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~ 163 (273)
...+. ....++++..+++. ++.++++++||||||.+|+.++.++|+.+++++++++.........
T Consensus 101 ~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~ 180 (275)
T TIGR02821 101 GFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCPW 180 (275)
T ss_pred cccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCcc
Confidence 00112 23345677777776 3557899999999999999999999999999999988765432110
Q ss_pred HHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHh--hhhccEEEEecCCCCCCCh-HHHHHHHHHh---
Q 024042 164 EALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFN--DFVHDVLIVWGDQDQIFPL-KMATELKELL--- 237 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~l~i~g~~D~~~~~-~~~~~~~~~~--- 237 (273)
. . ......+ ......... ..+..... ....|+++.+|+.|..++. .....+.+.+
T Consensus 181 ~---~----~~~~~~l-~~~~~~~~~-----------~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~ 241 (275)
T TIGR02821 181 G---Q----KAFSAYL-GADEAAWRS-----------YDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAA 241 (275)
T ss_pred h---H----HHHHHHh-cccccchhh-----------cchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHc
Confidence 0 0 0000001 000000000 01111111 1234899999999999997 3444454444
Q ss_pred cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 238 GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 238 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+.+.++..+||.+|.+..- ....+...+|..++
T Consensus 242 g~~v~~~~~~g~~H~f~~~--~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 242 GQALTLRRQAGYDHSYYFI--ASFIADHLRHHAER 274 (275)
T ss_pred CCCeEEEEeCCCCccchhH--HHhHHHHHHHHHhh
Confidence 4668999999999986432 23344445565544
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-19 Score=132.01 Aligned_cols=244 Identities=17% Similarity=0.260 Sum_probs=142.4
Q ss_pred CCceeEEecCCcceEE-eecCCccCCCCCCCCCeEEEEcCCCCchhHhH-HHHHHhhcCC-CeEEeecCCCCCCCCCCCc
Q 024042 24 GLSSQTIDIDDETTLH-FWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW-RKQVQFFAPH-FNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~-~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~ 100 (273)
....+.+.++||-.+. .|... +.+..+|.||++||+.++....| +.+.+.+.++ |.|+++++|||+.+....+
T Consensus 48 ~~~re~v~~pdg~~~~ldw~~~----p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p 123 (345)
T COG0429 48 AYTRERLETPDGGFIDLDWSED----PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP 123 (345)
T ss_pred ccceEEEEcCCCCEEEEeeccC----ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc
Confidence 4466788888776544 44443 33566789999999877663444 5566777776 9999999999999886544
Q ss_pred cccHHHHHHHHHHHHHH----hCCccEEEEEeccch-HHHHHHHHhCCc-ccceEEEecCCCCCCCc------chH-HHh
Q 024042 101 QRTELFQAASLGKLLEK----IGVERFSVVGTSYGG-FVAYHMARMWPE-RVEKVVIASSGVNMKRG------DNE-ALV 167 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~----~~~~~i~l~G~S~Gg-~~a~~~a~~~~~-~v~~~v~~~~~~~~~~~------~~~-~~~ 167 (273)
...-.-..+|+..+++. ....++..+|.|+|| +++..++.+-.+ .+.+.+.++.+.+.... ... .+.
T Consensus 124 ~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly 203 (345)
T COG0429 124 RLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLY 203 (345)
T ss_pred ceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhh
Confidence 32111112444444433 345889999999999 555555444221 36666666655443111 000 110
Q ss_pred hh-----hh---hhhhhhc--cCCCC-hHHHHHHhhhhhccCC----------------CCChhhHHhhhhccEEEEecC
Q 024042 168 KR-----AN---LERIDHL--MLPES-ASQLRTLTGLAVSKNL----------------DIVPDFFFNDFVHDVLIVWGD 220 (273)
Q Consensus 168 ~~-----~~---~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~p~l~i~g~ 220 (273)
.. .. ....... ..+.. ...++.......++.. .-+....+.++..|+|+|++.
T Consensus 204 ~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~ 283 (345)
T COG0429 204 SRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAK 283 (345)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecC
Confidence 00 00 0001111 01111 1222211111111110 112223456677799999999
Q ss_pred CCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcC----Chh-hHHHHHHHHhcc
Q 024042 221 QDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE----NPG-LFNSIVKNFLRG 271 (273)
Q Consensus 221 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~~ 271 (273)
+|++++++..........+++.+...+.+||..++. +|. ...+.+.+||+.
T Consensus 284 DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 284 DDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred CCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 999999987777666455899999999999987665 343 455677777764
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.2e-19 Score=128.12 Aligned_cols=179 Identities=21% Similarity=0.240 Sum_probs=109.3
Q ss_pred CCCCCCeEEEEcCCCCchhHhHHHHHH-hhcC-CCeEEeecCCC------CCC---CCCC-----C-c---cccHHHHHH
Q 024042 50 KTLKKPSLVLIHGFGPEAIWQWRKQVQ-FFAP-HFNVYVPDLIF------FGH---STTR-----S-I---QRTELFQAA 109 (273)
Q Consensus 50 ~~~~~~~vi~~hG~~~~~~~~~~~~~~-~l~~-~~~v~~~d~~g------~g~---s~~~-----~-~---~~~~~~~~~ 109 (273)
.++..++||++||+|.+. ..+..... .+.. ...++.++-|. .|. +..+ . . .......++
T Consensus 10 ~~~~~~lvi~LHG~G~~~-~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSE-DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp SST-SEEEEEE--TTS-H-HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCc-chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 366788999999999998 77766665 2222 36666665431 222 1111 1 1 123333444
Q ss_pred HHHHHHHHh-----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCCh
Q 024042 110 SLGKLLEKI-----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESA 184 (273)
Q Consensus 110 ~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (273)
.+.++++.. +.+++++.|+|.||.+|+.++.++|+.+.++|.+++........... .
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~------------------~ 150 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDR------------------P 150 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCC------------------H
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccccc------------------c
Confidence 555555532 44789999999999999999999999999999999866543211000 0
Q ss_pred HHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhhH
Q 024042 185 SQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGLF 261 (273)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~ 261 (273)
.... ..|++++||..|+++|.+.++...+.+ +.+++++.+++.||... .+.
T Consensus 151 ---------------~~~~-------~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~ 204 (216)
T PF02230_consen 151 ---------------EALA-------KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEE 204 (216)
T ss_dssp ---------------CCCC-------TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHH
T ss_pred ---------------cccC-------CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHH
Confidence 0000 228999999999999999888887777 35689999999999863 355
Q ss_pred HHHHHHHhcccC
Q 024042 262 NSIVKNFLRGSL 273 (273)
Q Consensus 262 ~~~i~~fl~~~l 273 (273)
.+.+.+||++++
T Consensus 205 ~~~~~~~l~~~~ 216 (216)
T PF02230_consen 205 LRDLREFLEKHI 216 (216)
T ss_dssp HHHHHHHHHHH-
T ss_pred HHHHHHHHhhhC
Confidence 567889998753
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.8e-18 Score=121.49 Aligned_cols=214 Identities=15% Similarity=0.166 Sum_probs=142.1
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-cccHHHHHHHHHHHHHHhCC-ccEEEEE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QRTELFQAASLGKLLEKIGV-ERFSVVG 127 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~~-~~i~l~G 127 (273)
++...+||-+||.+++. ..++.+.+.|.+. .+++.+++||+|.+..+.. .++-.+....+.++++.+++ ++++++|
T Consensus 32 gs~~gTVv~~hGsPGSH-~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~g 110 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSH-NDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLG 110 (297)
T ss_pred CCCceeEEEecCCCCCc-cchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEE
Confidence 44455999999999999 9999999999887 9999999999999987655 46788889999999999988 6789999
Q ss_pred eccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccC-------------------CCChHHHH
Q 024042 128 TSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML-------------------PESASQLR 188 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~ 188 (273)
||.|+-.|+.++..+| ..++++++|+.......-...........+...+. ........
T Consensus 111 HSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~GeeA~n 188 (297)
T PF06342_consen 111 HSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKVSDGEEAIN 188 (297)
T ss_pred eccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeecChHHHHH
Confidence 9999999999999986 77999999876544332111111100001111000 00011111
Q ss_pred HHh---hhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh--------------------------cC
Q 024042 189 TLT---GLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL--------------------------GK 239 (273)
Q Consensus 189 ~~~---~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~--------------------------~~ 239 (273)
... ...+... ..-...+++-..|+++++|.+|.++..+...++...+ +.
T Consensus 189 a~r~m~~~df~~q--~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~ 266 (297)
T PF06342_consen 189 AMRSMQNCDFEEQ--KEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILKSFASGQ 266 (297)
T ss_pred HHHHHHhcCHHHH--HHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHHHHhcCC
Confidence 100 0000000 0001112222249999999999998777666654443 11
Q ss_pred CcEEEEeCCCCCCcCcCChhhHHHHHHHHh
Q 024042 240 KARLEIIENTSHVPQIENPGLFNSIVKNFL 269 (273)
Q Consensus 240 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 269 (273)
....+.+.+.||+.+-.+++.+++.+...|
T Consensus 267 ~~~sv~f~~dgHf~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 267 KGASVFFAKDGHFQQKFRADLIAEAIKKMF 296 (297)
T ss_pred ceeEEEEecCChHHhHHHHHHHHHHHHHhh
Confidence 233456777899998888888888887765
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.8e-19 Score=134.54 Aligned_cols=234 Identities=15% Similarity=0.138 Sum_probs=132.7
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC-CCeEEeecCCCCCCCCCCCcccc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
++...|.. +|.+|..+...| .++++.|+||++.|.-+...+.|..+.+.+.+ ++.++++|.||.|.|...+...+
T Consensus 165 i~~v~iP~-eg~~I~g~LhlP---~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D 240 (411)
T PF06500_consen 165 IEEVEIPF-EGKTIPGYLHLP---SGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQD 240 (411)
T ss_dssp EEEEEEEE-TTCEEEEEEEES---SSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-
T ss_pred cEEEEEee-CCcEEEEEEEcC---CCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcC
Confidence 45555555 557776655442 34566788888888877773445555566654 49999999999999864433334
Q ss_pred HHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhh--hhhhhhhhhc
Q 024042 104 ELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVK--RANLERIDHL 178 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 178 (273)
.+...+.+.+.+... +..+|.++|.|+||++|.++|..++++++++|..+++....-........ ......+...
T Consensus 241 ~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d~LA~r 320 (411)
T PF06500_consen 241 SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLDVLASR 320 (411)
T ss_dssp CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHHHHHHHHHH
Confidence 445566666666655 34799999999999999999998888999999999986644221111111 1111111121
Q ss_pred cCCC--ChHHHHHHhhhhhccCCCCChhhHH--hhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCC-CCc
Q 024042 179 MLPE--SASQLRTLTGLAVSKNLDIVPDFFF--NDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTS-HVP 253 (273)
Q Consensus 179 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~ 253 (273)
+... ....+......... ....++ ++...|+|.+.+++|.++|.+..+.++..- .+.+...++... |..
T Consensus 321 lG~~~~~~~~l~~el~~~SL-----k~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s-~~gk~~~~~~~~~~~g 394 (411)
T PF06500_consen 321 LGMAAVSDESLRGELNKFSL-----KTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESS-TDGKALRIPSKPLHMG 394 (411)
T ss_dssp CT-SCE-HHHHHHHGGGGST-----TTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTB-TT-EEEEE-SSSHHHH
T ss_pred hCCccCCHHHHHHHHHhcCc-----chhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcC-CCCceeecCCCccccc
Confidence 1111 12222222111111 111222 455669999999999999999998888776 778888887544 332
Q ss_pred CcCChhhHHHHHHHHhccc
Q 024042 254 QIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 254 ~~~~~~~~~~~i~~fl~~~ 272 (273)
-+.-...+.+||++.
T Consensus 395 ----y~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 395 ----YPQALDEIYKWLEDK 409 (411)
T ss_dssp ----HHHHHHHHHHHHHHH
T ss_pred ----hHHHHHHHHHHHHHh
Confidence 235567778888764
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.9e-18 Score=130.60 Aligned_cols=229 Identities=12% Similarity=0.020 Sum_probs=132.9
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCccc
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQR 102 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~ 102 (273)
..+...+| .+..+.+.| .....|+||++||.+ ++. ..|..+...|++ ++.|+++|+|...+...+....
T Consensus 60 ~~i~~~~g-~i~~~~y~P----~~~~~p~vv~~HGGg~~~g~~-~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~ 133 (318)
T PRK10162 60 YMVPTPYG-QVETRLYYP----QPDSQATLFYLHGGGFILGNL-DTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIE 133 (318)
T ss_pred EEEecCCC-ceEEEEECC----CCCCCCEEEEEeCCcccCCCc-hhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHH
Confidence 34444455 344444432 133468999999966 444 567777777765 4999999999765543333222
Q ss_pred cHHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC------CcccceEEEecCCCCCCCcchHHHhhhhhhhh
Q 024042 103 TELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW------PERVEKVVIASSGVNMKRGDNEALVKRANLER 174 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~------~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (273)
+.....+++.+..+.++. ++++++|+|+||.+|+.++... +.++++++++.|......... .. ...
T Consensus 134 D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s--~~-~~~--- 207 (318)
T PRK10162 134 EIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVS--RR-LLG--- 207 (318)
T ss_pred HHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChh--HH-HhC---
Confidence 333344445544555554 6899999999999999988753 356899999988766432110 00 000
Q ss_pred hhhccCCCChHHHHHHhhhhhccC-----CCCChh-hHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEE
Q 024042 175 IDHLMLPESASQLRTLTGLAVSKN-----LDIVPD-FFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEI 245 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~ 245 (273)
..........+........... ....+. ..+..-..|+++++|+.|.+.+ ..+.+.+++ +.++++++
T Consensus 208 --~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~ 283 (318)
T PRK10162 208 --GVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKL 283 (318)
T ss_pred --CCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEE
Confidence 0000011111111111111100 000110 0111223499999999999864 455565555 46799999
Q ss_pred eCCCCCCcCcC-----ChhhHHHHHHHHhccc
Q 024042 246 IENTSHVPQIE-----NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 246 ~~~~gH~~~~~-----~~~~~~~~i~~fl~~~ 272 (273)
+++..|.+... ...+..+.+.+||++.
T Consensus 284 ~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 284 YPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred ECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 99999965432 2346667777888764
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-18 Score=151.75 Aligned_cols=216 Identities=16% Similarity=0.212 Sum_probs=137.6
Q ss_pred CCCCeEEEEcCCCCchhHhHHHH-----HHhhcCC-CeEEeecCCCCCCCCCCCc--cccHHHHHHHHHHHHHH---hCC
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQ-----VQFFAPH-FNVYVPDLIFFGHSTTRSI--QRTELFQAASLGKLLEK---IGV 120 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~-----~~~l~~~-~~v~~~d~~g~g~s~~~~~--~~~~~~~~~~~~~~~~~---~~~ 120 (273)
..+++||++||++.+. ..|+.. ++.|.+. |+|+++|+ |.++.+.. ..+..+++..+.+.++. +..
T Consensus 65 ~~~~plllvhg~~~~~-~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~ 140 (994)
T PRK07868 65 PVGPPVLMVHPMMMSA-DMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTG 140 (994)
T ss_pred CCCCcEEEECCCCCCc-cceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhC
Confidence 4668999999999988 888865 6778665 99999995 55544322 24556666555555554 344
Q ss_pred ccEEEEEeccchHHHHHHHHhC-CcccceEEEecCCCCCCCcc----hHH------------Hhhhhhh-----------
Q 024042 121 ERFSVVGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKRGD----NEA------------LVKRANL----------- 172 (273)
Q Consensus 121 ~~i~l~G~S~Gg~~a~~~a~~~-~~~v~~~v~~~~~~~~~~~~----~~~------------~~~~~~~----------- 172 (273)
++++++||||||.+++.++..+ +++|+++|+++++.++.... ... +......
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 220 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQM 220 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHh
Confidence 7899999999999999988754 55899999988775532110 000 0000000
Q ss_pred -------h---hhhhccCC-C---C-----------------hHHHHHHhhhhhccCCCCC-----h--hhHHhhhhccE
Q 024042 173 -------E---RIDHLMLP-E---S-----------------ASQLRTLTGLAVSKNLDIV-----P--DFFFNDFVHDV 214 (273)
Q Consensus 173 -------~---~~~~~~~~-~---~-----------------~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~p~ 214 (273)
. .+...+.. . . ...........+..+.... . ...+.++..|+
T Consensus 221 l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~ 300 (994)
T PRK07868 221 LDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPV 300 (994)
T ss_pred cChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCE
Confidence 0 00000000 0 0 0001111111111000000 0 01356777799
Q ss_pred EEEecCCCCCCChHHHHHHHHHhcCCcEE-EEeCCCCCCcCc---CChhhHHHHHHHHhccc
Q 024042 215 LIVWGDQDQIFPLKMATELKELLGKKARL-EIIENTSHVPQI---ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 215 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---~~~~~~~~~i~~fl~~~ 272 (273)
|+++|++|.++|++.++.+.+.+ ++.++ .+++++||+.++ ..+++++..|.+||+++
T Consensus 301 L~i~G~~D~ivp~~~~~~l~~~i-~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 301 LAFVGEVDDIGQPASVRGIRRAA-PNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 99999999999999999999998 88887 677899998654 45778999999999864
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-18 Score=132.02 Aligned_cols=175 Identities=16% Similarity=0.178 Sum_probs=113.2
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH-------hCCcc
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK-------IGVER 122 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 122 (273)
.+..|+|||+||++.+. ..|..+++.|++. |.|+++|++|++.+.......+..+..+++.+.++. .+.++
T Consensus 49 ~g~~PvVv~lHG~~~~~-~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~ 127 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYN-SFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSK 127 (313)
T ss_pred CCCCCEEEEECCCCCCc-ccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhh
Confidence 45679999999999888 8899999999887 999999999865432111111222223333332222 23478
Q ss_pred EEEEEeccchHHHHHHHHhCCc-----ccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhcc
Q 024042 123 FSVVGTSYGGFVAYHMARMWPE-----RVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSK 197 (273)
Q Consensus 123 i~l~G~S~Gg~~a~~~a~~~~~-----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (273)
++++|||+||.+|+.++..+++ ++.++|.++|........ ...+..+ .+
T Consensus 128 v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~------------------~~~p~il------~~-- 181 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGK------------------QTPPPVL------TY-- 181 (313)
T ss_pred eEEEEECcchHHHHHHHhhccccccccceeeEEeecccccccccc------------------CCCCccc------cc--
Confidence 9999999999999999998764 578999998865432110 0000000 00
Q ss_pred CCCCChhhHHhhhhccEEEEecCCCC-----C----CChH-HHHHHHHHhcCCcEEEEeCCCCCCcCcCCh
Q 024042 198 NLDIVPDFFFNDFVHDVLIVWGDQDQ-----I----FPLK-MATELKELLGKKARLEIIENTSHVPQIENP 258 (273)
Q Consensus 198 ~~~~~~~~~~~~~~~p~l~i~g~~D~-----~----~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 258 (273)
.+. ..++..|+|++.+..|. . .|.. ...++++.+++.+...+++++||+-++++.
T Consensus 182 ----~~~--s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 182 ----APH--SFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred ----Ccc--cccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceeecCC
Confidence 000 00133499999999763 2 2233 346777777678888899999998776543
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.4e-18 Score=129.05 Aligned_cols=248 Identities=13% Similarity=0.109 Sum_probs=142.1
Q ss_pred hCCCceeEEecCCcceEEeecCCccCC---CCCCCCCeEEEEcCCCCchhHhH-HHHHHhhcCC-CeEEeecCCCCCCCC
Q 024042 22 SAGLSSQTIDIDDETTLHFWGPKLEDD---HKTLKKPSLVLIHGFGPEAIWQW-RKQVQFFAPH-FNVYVPDLIFFGHST 96 (273)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~~~~~~~~~~---~~~~~~~~vi~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~g~g~s~ 96 (273)
...++++.++++||.++.+-...+... ..+...|+||++||+.+++.+.| +.++..+.+. |+|++++.||+|.+.
T Consensus 90 ~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~ 169 (409)
T KOG1838|consen 90 PVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSK 169 (409)
T ss_pred CCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCc
Confidence 344678899999998887765532221 11356799999999877663444 4555555554 999999999999988
Q ss_pred CCCccccHHHHHHHHHHHHHH----hCCccEEEEEeccchHHHHHHHHhCCcc---cceEEEecCCCCC--CCcc----h
Q 024042 97 TRSIQRTELFQAASLGKLLEK----IGVERFSVVGTSYGGFVAYHMARMWPER---VEKVVIASSGVNM--KRGD----N 163 (273)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~a~~~~~~---v~~~v~~~~~~~~--~~~~----~ 163 (273)
-..+..-.....+|+.+++++ +...++..+|.||||.+.+.+..+..++ +.++.+++|+-.. .... .
T Consensus 170 LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~ 249 (409)
T KOG1838|consen 170 LTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLY 249 (409)
T ss_pred cCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccc
Confidence 655533222223444444444 4557899999999999999998875432 4455555554322 1110 1
Q ss_pred HHHhhhhhhhhhhh------------------ccCCCChHHHHHHhhhhhccCC-------CCChhhHHhhhhccEEEEe
Q 024042 164 EALVKRANLERIDH------------------LMLPESASQLRTLTGLAVSKNL-------DIVPDFFFNDFVHDVLIVW 218 (273)
Q Consensus 164 ~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~p~l~i~ 218 (273)
..+........+.. .....+...+.+......+... ...+...+.++..|+|+|+
T Consensus 250 ~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~in 329 (409)
T KOG1838|consen 250 RRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCIN 329 (409)
T ss_pred hHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEe
Confidence 11111100000000 0011111122222211111111 1133344556666999999
Q ss_pred cCCCCCCChHHHH-HHHHHhcCCcEEEEeCCCCCCcCcCC----hhhHHHH-HHHHhc
Q 024042 219 GDQDQIFPLKMAT-ELKELLGKKARLEIIENTSHVPQIEN----PGLFNSI-VKNFLR 270 (273)
Q Consensus 219 g~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~----~~~~~~~-i~~fl~ 270 (273)
+.+|+++|.+..- ...... +++-+++-..+||..++|. +..+.+. +.+|+.
T Consensus 330 a~DDPv~p~~~ip~~~~~~n-p~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~ 386 (409)
T KOG1838|consen 330 AADDPVVPEEAIPIDDIKSN-PNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLG 386 (409)
T ss_pred cCCCCCCCcccCCHHHHhcC-CcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHH
Confidence 9999999986332 233333 7888888889999877765 2333343 666654
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-17 Score=121.57 Aligned_cols=169 Identities=15% Similarity=0.095 Sum_probs=99.8
Q ss_pred CCCCCeEEEEcCCCCchhHhHH---HHHHhhcCC-CeEEeecCCCCCCCCCCC----------ccccHHHHHHHHHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWR---KQVQFFAPH-FNVYVPDLIFFGHSTTRS----------IQRTELFQAASLGKLLE 116 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~---~~~~~l~~~-~~v~~~d~~g~g~s~~~~----------~~~~~~~~~~~~~~~~~ 116 (273)
.++.|+||++||.+++. ..+. .+...+.+. |.|+++|++|++.+.... ......+..+.+..+.+
T Consensus 10 ~~~~P~vv~lHG~~~~~-~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (212)
T TIGR01840 10 TGPRALVLALHGCGQTA-SAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKA 88 (212)
T ss_pred CCCCCEEEEeCCCCCCH-HHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHH
Confidence 35679999999998877 5444 233444444 999999999987543210 00112222222333333
Q ss_pred Hh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhh
Q 024042 117 KI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLA 194 (273)
Q Consensus 117 ~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (273)
.. +.++++|+|||+||.+++.++.++|+.+.+++.+++............. ...........+.......
T Consensus 89 ~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 160 (212)
T TIGR01840 89 NYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISAT--------PQMCTAATAASVCRLVRGM 160 (212)
T ss_pred hcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhH--------hhcCCCCCHHHHHHHHhcc
Confidence 33 3368999999999999999999999999999888876543221111000 0001111112222221111
Q ss_pred hccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh
Q 024042 195 VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL 237 (273)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~ 237 (273)
.... .....|++++||++|.++|.+.++.+.+.+
T Consensus 161 ~~~~---------~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l 194 (212)
T TIGR01840 161 QSEY---------NGPTPIMSVVHGDADYTVLPGNADEIRDAM 194 (212)
T ss_pred CCcc---------cCCCCeEEEEEcCCCceeCcchHHHHHHHH
Confidence 1000 011115789999999999999888888877
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-17 Score=122.29 Aligned_cols=178 Identities=22% Similarity=0.212 Sum_probs=116.2
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc---c--------cHHHHHHHHHHHHHHh-
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ---R--------TELFQAASLGKLLEKI- 118 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~---~--------~~~~~~~~~~~~~~~~- 118 (273)
++.|.||++|++.+-. ...+.+++.|++. |.|+++|+-+-......... . ..+...+++.+.++.+
T Consensus 12 ~~~~~Vvv~~d~~G~~-~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLN-PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SSEEEEEEE-BTTBS--HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCc-hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 4789999999988776 6777888888877 99999998643331111110 0 1223445555555555
Q ss_pred --C---CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhh
Q 024042 119 --G---VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGL 193 (273)
Q Consensus 119 --~---~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (273)
. .++|.++|+|+||.+|+.++... ..+++.+..-|....
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~----------------------------------- 134 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP----------------------------------- 134 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-----------------------------------
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-----------------------------------
Confidence 2 36899999999999999999887 569998887661110
Q ss_pred hhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCCh--------hhHH
Q 024042 194 AVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENP--------GLFN 262 (273)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~--------~~~~ 262 (273)
..+.....++..|+++++|++|+.++.+..+.+.+.+ +...++++|+|++|.+..... ++..
T Consensus 135 -------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~ 207 (218)
T PF01738_consen 135 -------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAW 207 (218)
T ss_dssp -------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHH
T ss_pred -------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHH
Confidence 0122233445559999999999999999888888777 578999999999998765322 3566
Q ss_pred HHHHHHhcccC
Q 024042 263 SIVKNFLRGSL 273 (273)
Q Consensus 263 ~~i~~fl~~~l 273 (273)
+.+.+||+++|
T Consensus 208 ~~~~~ff~~~L 218 (218)
T PF01738_consen 208 QRTLAFFKRHL 218 (218)
T ss_dssp HHHHHHHCC--
T ss_pred HHHHHHHHhcC
Confidence 78889999876
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-17 Score=117.36 Aligned_cols=174 Identities=20% Similarity=0.257 Sum_probs=120.9
Q ss_pred CCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCC--CCC----CCCCCccc-------cHHHHHHHHHHHHH
Q 024042 50 KTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIF--FGH----STTRSIQR-------TELFQAASLGKLLE 116 (273)
Q Consensus 50 ~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g--~g~----s~~~~~~~-------~~~~~~~~~~~~~~ 116 (273)
.++..|+||++||+|++. ..+.+....+..+..++.+.=+- .|. +......+ .....++.+....+
T Consensus 14 ~~p~~~~iilLHG~Ggde-~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 14 GDPAAPLLILLHGLGGDE-LDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCCCcEEEEEecCCCCh-hhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 356677999999999988 77777777766666666654220 000 00011111 22333444555555
Q ss_pred HhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhh
Q 024042 117 KIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLA 194 (273)
Q Consensus 117 ~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (273)
+.+. ++++++|+|.||.+++.+..++|+.+++++++++......... +
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~-----------------~------------- 142 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELL-----------------P------------- 142 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCccc-----------------c-------------
Confidence 6665 8999999999999999999999999999999998766542100 0
Q ss_pred hccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 195 VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
..-..|+++++|+.|+++|...+.++.+.+ +.+++...++ .||... .+..+.+.+|+.+
T Consensus 143 -------------~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~----~e~~~~~~~wl~~ 204 (207)
T COG0400 143 -------------DLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIP----PEELEAARSWLAN 204 (207)
T ss_pred -------------ccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCC----HHHHHHHHHHHHh
Confidence 000118999999999999998888777766 5788899998 899874 3455667778875
Q ss_pred c
Q 024042 272 S 272 (273)
Q Consensus 272 ~ 272 (273)
.
T Consensus 205 ~ 205 (207)
T COG0400 205 T 205 (207)
T ss_pred c
Confidence 4
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.6e-17 Score=119.30 Aligned_cols=236 Identities=16% Similarity=0.134 Sum_probs=139.9
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHH-----HhhcCCCeEEeecCCCCCCCCCCCc--
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQV-----QFFAPHFNVYVPDLIFFGHSTTRSI-- 100 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~-----~~l~~~~~v~~~d~~g~g~s~~~~~-- 100 (273)
+.++++-| .+++...| ..++++|++|-.|..|.+....|..+. ..+.++|.++=+|.||+.......+
T Consensus 2 h~v~t~~G-~v~V~v~G----~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~ 76 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQG----DPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEG 76 (283)
T ss_dssp EEEEETTE-EEEEEEES----S--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT
T ss_pred ceeccCce-EEEEEEEe----cCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCccccccc
Confidence 56777666 67777777 334469999999999988844466554 5677789999999999876553322
Q ss_pred --cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhh-------h
Q 024042 101 --QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA-------N 171 (273)
Q Consensus 101 --~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~-------~ 171 (273)
..++++.++++..++++++.+.++-+|-..||.+..++|..+|++|.|+|++++.............+.. +
T Consensus 77 y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~g 156 (283)
T PF03096_consen 77 YQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYG 156 (283)
T ss_dssp -----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------C
T ss_pred ccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhcccccccc
Confidence 2389999999999999999999999999999999999999999999999999986654332110000000 0
Q ss_pred h----------hhhhhccCCCChHHHHHHhhhhhccCCCCChhhH-------------HhhhhccEEEEecCCCCCCChH
Q 024042 172 L----------ERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFF-------------FNDFVHDVLIVWGDQDQIFPLK 228 (273)
Q Consensus 172 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~p~l~i~g~~D~~~~~~ 228 (273)
. ..+.........+.................-..+ .....+|+|++.|+..+. .+
T Consensus 157 mt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~--~~ 234 (283)
T PF03096_consen 157 MTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPH--VD 234 (283)
T ss_dssp TTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTT--HH
T ss_pred cccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcc--hh
Confidence 0 0000000001111111111111000000000011 122235999999999877 56
Q ss_pred HHHHHHHHh-cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 229 MATELKELL-GKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 229 ~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.+..+..++ +.+.++..++++|=....|+|..+++.++-||+
T Consensus 235 ~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 235 DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHH
T ss_pred hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHc
Confidence 777888888 456788999999999999999999999999986
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.9e-17 Score=124.29 Aligned_cols=232 Identities=17% Similarity=0.111 Sum_probs=130.7
Q ss_pred EecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc---------
Q 024042 30 IDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI--------- 100 (273)
Q Consensus 30 ~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~--------- 100 (273)
++..+|..++.+...|+. ..++.|.||.+||.++.. ..+......-..++.|+.+|.||+|.......
T Consensus 61 f~s~~g~~V~g~l~~P~~--~~~~~Pavv~~hGyg~~~-~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g 137 (320)
T PF05448_consen 61 FESFDGSRVYGWLYRPKN--AKGKLPAVVQFHGYGGRS-GDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKG 137 (320)
T ss_dssp EEEGGGEEEEEEEEEES---SSSSEEEEEEE--TT--G-GGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSS
T ss_pred EEccCCCEEEEEEEecCC--CCCCcCEEEEecCCCCCC-CCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCcc
Confidence 333478888877776432 356788999999999887 66666666666679999999999993221100
Q ss_pred -----------cccHHHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch
Q 024042 101 -----------QRTELFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN 163 (273)
Q Consensus 101 -----------~~~~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~ 163 (273)
.+-......|+...++.+ +.++|.+.|.|.||.+++.+|+..+ +|++++...|.........
T Consensus 138 ~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~~ 216 (320)
T PF05448_consen 138 HITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRAL 216 (320)
T ss_dssp STTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHHH
T ss_pred HHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhhh
Confidence 011122334444444433 3478999999999999999999875 6999999888654321100
Q ss_pred HHHhhhhhhhhhhhccC--CCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCc
Q 024042 164 EALVKRANLERIDHLML--PESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKA 241 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 241 (273)
...........+...+. ........+......+ .....+..++.+|+++-.|-.|.++|+...-..++.++..+
T Consensus 217 ~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y----~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K 292 (320)
T PF05448_consen 217 ELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSY----FDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPK 292 (320)
T ss_dssp HHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHT----T-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSE
T ss_pred hcCCccccHHHHHHHHhccCCCcccHHHHHHHHhh----hhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCe
Confidence 00000000011111111 0111111111111111 13445677888899999999999999999999999986679
Q ss_pred EEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 242 RLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 242 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
++.++|..||... ++.-.+...+||+++
T Consensus 293 ~l~vyp~~~He~~---~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 293 ELVVYPEYGHEYG---PEFQEDKQLNFLKEH 320 (320)
T ss_dssp EEEEETT--SSTT---HHHHHHHHHHHHHH-
T ss_pred eEEeccCcCCCch---hhHHHHHHHHHHhcC
Confidence 9999999999753 223367777888764
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-16 Score=108.01 Aligned_cols=173 Identities=18% Similarity=0.166 Sum_probs=121.2
Q ss_pred CCCCCeEEEEcCC---CCch-hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccc-cHHHHHHHHHHHHHHhCC--cc
Q 024042 51 TLKKPSLVLIHGF---GPEA-IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQR-TELFQAASLGKLLEKIGV--ER 122 (273)
Q Consensus 51 ~~~~~~vi~~hG~---~~~~-~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~-~~~~~~~~~~~~~~~~~~--~~ 122 (273)
.+..|..|.+|.- +++. ......++..|.+. |.++.+|+||.|.|.+..... ...+.+..+.++++.... ..
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~ 104 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSAS 104 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchh
Confidence 4677888888862 2222 13445666777777 999999999999998765432 333345555555555543 22
Q ss_pred EEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCC
Q 024042 123 FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIV 202 (273)
Q Consensus 123 i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (273)
..+.|+|+|+.+++++|.+.|+ ....+.+.|.....
T Consensus 105 ~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~------------------------------------------- 140 (210)
T COG2945 105 CWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY------------------------------------------- 140 (210)
T ss_pred hhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch-------------------------------------------
Confidence 4689999999999999999876 55555555543310
Q ss_pred hhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 203 PDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 203 ~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
...+......|.++|+|+.|.+++.....++.+. ...+++.+++++||++- +-..+.+.+.+||.
T Consensus 141 dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~--~~~~~i~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 141 DFSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES--IKITVITIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred hhhhccCCCCCceeEecChhhhhcHHHHHHhhcC--CCCceEEecCCCceecc-cHHHHHHHHHHHhh
Confidence 0001111222899999999999998888888776 46788899999999864 46688899999993
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.1e-16 Score=110.50 Aligned_cols=239 Identities=17% Similarity=0.150 Sum_probs=162.2
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHH-----HhhcCCCeEEeecCCCCCCCCCCC
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQV-----QFFAPHFNVYVPDLIFFGHSTTRS 99 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~-----~~l~~~~~v~~~d~~g~g~s~~~~ 99 (273)
.+++.|.+..| .+++..+| ..++++|++|-.|..|-+....|..+. ..+.++|.++-+|.||+-...+..
T Consensus 22 ~~e~~V~T~~G-~v~V~V~G----d~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~ 96 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYG----DPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSF 96 (326)
T ss_pred ceeeeeccccc-cEEEEEec----CCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccC
Confidence 67888888666 57888877 445578999999999988845466553 455566999999999986654332
Q ss_pred c----cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch---HHHh----h
Q 024042 100 I----QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN---EALV----K 168 (273)
Q Consensus 100 ~----~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~---~~~~----~ 168 (273)
+ ..+.++.++++..++++++.+.++-+|.-.|+++..++|..+|++|-++|++++......... ..+. .
T Consensus 97 p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~ 176 (326)
T KOG2931|consen 97 PEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLY 176 (326)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHH
Confidence 2 248999999999999999999999999999999999999999999999999998655433211 1111 0
Q ss_pred hhhh----------hhhhhccCCCChHHHHHH----------------hhhhhccCC-CCChhhHHhhhhccEEEEecCC
Q 024042 169 RANL----------ERIDHLMLPESASQLRTL----------------TGLAVSKNL-DIVPDFFFNDFVHDVLIVWGDQ 221 (273)
Q Consensus 169 ~~~~----------~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~-~~~~~~~~~~~~~p~l~i~g~~ 221 (273)
..+. ..+.........+...++ +.....+.. ..........+.+|+|++.|+.
T Consensus 177 ~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~ 256 (326)
T KOG2931|consen 177 YYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDN 256 (326)
T ss_pred hhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCC
Confidence 0000 001111111122222221 111111110 0001111125567999999999
Q ss_pred CCCCChHHHHHHHHHh-cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 222 DQIFPLKMATELKELL-GKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 222 D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.+.+ +.+..+..++ +.+..+..+.++|-.+..++|..+.+.+.-|++
T Consensus 257 Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 257 SPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred Cchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 8764 4555666666 356788889999999999999999999998886
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.4e-16 Score=132.21 Aligned_cols=219 Identities=12% Similarity=-0.011 Sum_probs=135.4
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHHHhh-cCCCeEEeecCCCCCCCCC------
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQFF-APHFNVYVPDLIFFGHSTT------ 97 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~~~l-~~~~~v~~~d~~g~g~s~~------ 97 (273)
+..+++..||.++.++..-.+....+++.|+||++||..+.. ...|......| .++|.|+.++.||-|.-..
T Consensus 417 e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g 496 (686)
T PRK10115 417 EHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDG 496 (686)
T ss_pred EEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhh
Confidence 445566679999987433212111245669999999965544 22344444444 4459999999998554321
Q ss_pred --CCccccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhh
Q 024042 98 --RSIQRTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE 173 (273)
Q Consensus 98 --~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
.....+.++.++.+..+++.- +.+++.+.|.|.||.++..++.++|++++++|...|..++.......-... ...
T Consensus 497 ~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~-~~~ 575 (686)
T PRK10115 497 KFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPL-TTG 575 (686)
T ss_pred hhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCC-Chh
Confidence 111235555555555555432 347899999999999999999999999999999999877542210000000 000
Q ss_pred hhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhcc-EEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEe---
Q 024042 174 RIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHD-VLIVWGDQDQIFPLKMATELKELL---GKKARLEII--- 246 (273)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~--- 246 (273)
.....-.+........+. ...|-...+++..| +|+++|.+|..||+.++.++..++ +.+.+++++
T Consensus 576 ~~~e~G~p~~~~~~~~l~--------~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~ 647 (686)
T PRK10115 576 EFEEWGNPQDPQYYEYMK--------SYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTD 647 (686)
T ss_pred HHHHhCCCCCHHHHHHHH--------HcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEec
Confidence 111111222222111111 11344444555568 567799999999999999988887 345677777
Q ss_pred CCCCCCc
Q 024042 247 ENTSHVP 253 (273)
Q Consensus 247 ~~~gH~~ 253 (273)
+++||..
T Consensus 648 ~~~GHg~ 654 (686)
T PRK10115 648 MDSGHGG 654 (686)
T ss_pred CCCCCCC
Confidence 8999984
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.5e-17 Score=111.95 Aligned_cols=156 Identities=17% Similarity=0.216 Sum_probs=100.7
Q ss_pred EEEEcCCCCchhHhHHHHH-HhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHH
Q 024042 57 LVLIHGFGPEAIWQWRKQV-QFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVA 135 (273)
Q Consensus 57 vi~~hG~~~~~~~~~~~~~-~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a 135 (273)
|+++||++++....|.... +.+...++|-.+++ ...+.++..+.+.+.+...+ +++++||||+|+..+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~----------~~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~ 69 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW----------DNPDLDEWVQALDQAIDAID-EPTILVAHSLGCLTA 69 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC------------TS--HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc----------CCCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHH
Confidence 6899999988867777665 55655577776665 11255666666666666543 679999999999999
Q ss_pred HHHH-HhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccE
Q 024042 136 YHMA-RMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDV 214 (273)
Q Consensus 136 ~~~a-~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 214 (273)
+.++ .....+|+++++++|+...... ........ ........+..|.
T Consensus 70 l~~l~~~~~~~v~g~lLVAp~~~~~~~--------~~~~~~~~------------------------f~~~p~~~l~~~~ 117 (171)
T PF06821_consen 70 LRWLAEQSQKKVAGALLVAPFDPDDPE--------PFPPELDG------------------------FTPLPRDPLPFPS 117 (171)
T ss_dssp HHHHHHTCCSSEEEEEEES--SCGCHH--------CCTCGGCC------------------------CTTSHCCHHHCCE
T ss_pred HHHHhhcccccccEEEEEcCCCccccc--------chhhhccc------------------------cccCcccccCCCe
Confidence 9999 6777889999999987542000 00000000 0000111222377
Q ss_pred EEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCC
Q 024042 215 LIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIEN 257 (273)
Q Consensus 215 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 257 (273)
+++.+++|+++|.+.++.+++.+ +++++.++++||+.-.+.
T Consensus 118 ~viaS~nDp~vp~~~a~~~A~~l--~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 118 IVIASDNDPYVPFERAQRLAQRL--GAELIILGGGGHFNAASG 158 (171)
T ss_dssp EEEEETTBSSS-HHHHHHHHHHH--T-EEEEETS-TTSSGGGT
T ss_pred EEEEcCCCCccCHHHHHHHHHHc--CCCeEECCCCCCcccccC
Confidence 99999999999999999999999 789999999999976543
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-16 Score=117.68 Aligned_cols=210 Identities=13% Similarity=0.173 Sum_probs=132.5
Q ss_pred CeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCc-cEEEEEeccch
Q 024042 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVE-RFSVVGTSYGG 132 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~l~G~S~Gg 132 (273)
++|+++|+.+++. ..|..+++.+... +.|+.++.+|.+ .......++++.++...+.+.....+ ++.|+|||+||
T Consensus 1 ~~lf~~p~~gG~~-~~y~~la~~l~~~~~~v~~i~~~~~~--~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSA-SSYRPLARALPDDVIGVYGIEYPGRG--DDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSG-GGGHHHHHHHTTTEEEEEEECSTTSC--TTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCH-HHHHHHHHhCCCCeEEEEEEecCCCC--CCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 4799999999998 9999999999998 999999999988 33344568999999888888877665 99999999999
Q ss_pred HHHHHHHHhC---CcccceEEEecCCCCCCCcchHHHhhhhh--hhhhhhcc-----CCCChHHHHHHhhhhhccCCCCC
Q 024042 133 FVAYHMARMW---PERVEKVVIASSGVNMKRGDNEALVKRAN--LERIDHLM-----LPESASQLRTLTGLAVSKNLDIV 202 (273)
Q Consensus 133 ~~a~~~a~~~---~~~v~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 202 (273)
.+|..+|.+. ...+..++++++..+.............. ...+.... ................... ...
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 156 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLLRALRDDF-QAL 156 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHHHHHHHHH-HHH
Confidence 9999999764 33588999999765433211111110000 00000000 0001101111111100000 000
Q ss_pred hhhHHhhh---hccEEEEecCCCCCCChH---HHHHHHHHhcCCcEEEEeCCCCCCcCcC-ChhhHHHHHHHHh
Q 024042 203 PDFFFNDF---VHDVLIVWGDQDQIFPLK---MATELKELLGKKARLEIIENTSHVPQIE-NPGLFNSIVKNFL 269 (273)
Q Consensus 203 ~~~~~~~~---~~p~l~i~g~~D~~~~~~---~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl 269 (273)
........ ..|.++....+|+....+ ....|.+......+++.++ ++|+.++. +..++.+.|.++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 157 ENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp HTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SETTGHHSTTHHHHHHHHHHHH
T ss_pred hhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CCCcEecchHHHHHHHHHhccC
Confidence 00000000 226788888888887766 3444666665567888888 79998876 6678888888775
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1e-15 Score=114.59 Aligned_cols=234 Identities=18% Similarity=0.192 Sum_probs=148.0
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchh--H--------hHHHHH---HhhcCC-CeEEeecCCCCC-CCCCC
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI--W--------QWRKQV---QFFAPH-FNVYVPDLIFFG-HSTTR 98 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~--~--------~~~~~~---~~l~~~-~~v~~~d~~g~g-~s~~~ 98 (273)
++..+.|..+|..+ .....+|+++|++.++.. . -|..++ +.+.-. |-||+.|..|.. .|+.+
T Consensus 34 ~~~~vay~T~Gtln---~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP 110 (368)
T COG2021 34 SDARVAYETYGTLN---AEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGP 110 (368)
T ss_pred cCcEEEEEeccccc---ccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCC
Confidence 45668899998322 244568999999987551 1 233333 234444 999999999865 33332
Q ss_pred C-------------ccccHHHHHHHHHHHHHHhCCccEE-EEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc--
Q 024042 99 S-------------IQRTELFQAASLGKLLEKIGVERFS-VVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD-- 162 (273)
Q Consensus 99 ~-------------~~~~~~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-- 162 (273)
. +..++.+++..-..++++++++++. ++|-||||+.|+.++..+|+++..++.+++........
T Consensus 111 ~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia 190 (368)
T COG2021 111 SSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIA 190 (368)
T ss_pred CCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHH
Confidence 1 2357778888888899999999976 89999999999999999999999999998765443221
Q ss_pred hHHHhhhhh----------------------------------hhhhhhccCC------CC----hHHHHHHhhhh---h
Q 024042 163 NEALVKRAN----------------------------------LERIDHLMLP------ES----ASQLRTLTGLA---V 195 (273)
Q Consensus 163 ~~~~~~~~~----------------------------------~~~~~~~~~~------~~----~~~~~~~~~~~---~ 195 (273)
........- ...+...+.. .. ......++... +
T Consensus 191 ~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf 270 (368)
T COG2021 191 FNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKF 270 (368)
T ss_pred HHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHH
Confidence 000000000 0000000000 00 00111110000 0
Q ss_pred ------------------ccC--CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcE-EEEe-CCCCCCc
Q 024042 196 ------------------SKN--LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKAR-LEII-ENTSHVP 253 (273)
Q Consensus 196 ------------------~~~--~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~-~~~gH~~ 253 (273)
++. ........++.+..|++++.-+.|.+.|++..+.+.+.+ +... ++++ ...||..
T Consensus 271 ~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L-~~~~~~~~i~S~~GHDa 349 (368)
T COG2021 271 VARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEAL-PAAGALREIDSPYGHDA 349 (368)
T ss_pred HhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhc-cccCceEEecCCCCchh
Confidence 000 000111224445559999999999999999999999999 4444 6555 3479998
Q ss_pred CcCChhhHHHHHHHHhcc
Q 024042 254 QIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 254 ~~~~~~~~~~~i~~fl~~ 271 (273)
++...+.+...|.+||+.
T Consensus 350 FL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 350 FLVESEAVGPLIRKFLAL 367 (368)
T ss_pred hhcchhhhhHHHHHHhhc
Confidence 888788898999999975
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.6e-16 Score=124.40 Aligned_cols=108 Identities=15% Similarity=0.190 Sum_probs=83.0
Q ss_pred CCCCCeEEEEcCCCCch-hHhHHH-HHHhhc--C-CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh------C
Q 024042 51 TLKKPSLVLIHGFGPEA-IWQWRK-QVQFFA--P-HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI------G 119 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~-~~~~~~-~~~~l~--~-~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~------~ 119 (273)
+..+|++|++||++.+. ...|.. +...|. . +++|+++|++|+|.+..+.........++++.++++.+ +
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCC
Confidence 35679999999998653 145665 555442 2 49999999999998876543334455566666666654 3
Q ss_pred CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 120 VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 120 ~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
.++++|+||||||++|..++...|++|.++++++|..+.
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 589999999999999999999999999999999997654
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.1e-16 Score=107.86 Aligned_cols=179 Identities=20% Similarity=0.264 Sum_probs=108.5
Q ss_pred EEEEcCCCCchhHhHH--HHHHhhcCC---CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccc
Q 024042 57 LVLIHGFGPEAIWQWR--KQVQFFAPH---FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYG 131 (273)
Q Consensus 57 vi~~hG~~~~~~~~~~--~~~~~l~~~---~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~G 131 (273)
|+++||+.++. .... .+.+.+.+. ..+..+|++ .......+.+.++++....+.+.|+|.|+|
T Consensus 2 ilYlHGF~Ssp-~S~Ka~~l~~~~~~~~~~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~~~~~~~liGSSlG 69 (187)
T PF05728_consen 2 ILYLHGFNSSP-QSFKAQALKQYFAEHGPDIQYPCPDLP-----------PFPEEAIAQLEQLIEELKPENVVLIGSSLG 69 (187)
T ss_pred eEEecCCCCCC-CCHHHHHHHHHHHHhCCCceEECCCCC-----------cCHHHHHHHHHHHHHhCCCCCeEEEEEChH
Confidence 89999998877 3332 334445432 566777765 345566777888888887777999999999
Q ss_pred hHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc--CCCChHHHHHHhhhhhccCCCCChhhHHhh
Q 024042 132 GFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM--LPESASQLRTLTGLAVSKNLDIVPDFFFND 209 (273)
Q Consensus 132 g~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (273)
|..|..++.+++ +++ |+++|...+.... ....+.......- ................. ...
T Consensus 70 G~~A~~La~~~~--~~a-vLiNPav~p~~~l----~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~----------~~~ 132 (187)
T PF05728_consen 70 GFYATYLAERYG--LPA-VLINPAVRPYELL----QDYIGEQTNPYTGESYELTEEHIEELKALEVP----------YPT 132 (187)
T ss_pred HHHHHHHHHHhC--CCE-EEEcCCCCHHHHH----HHhhCccccCCCCccceechHhhhhcceEecc----------ccC
Confidence 999999999885 555 8899987754321 1111110000000 00000111110000000 011
Q ss_pred hhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 210 FVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 210 ~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
-..++++++++.|++++.+.+. +.. .++..++.+|++|.+ ++-++....|.+|+.
T Consensus 133 ~~~~~lvll~~~DEvLd~~~a~---~~~-~~~~~~i~~ggdH~f--~~f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 133 NPERYLVLLQTGDEVLDYREAV---AKY-RGCAQIIEEGGDHSF--QDFEEYLPQIIAFLQ 187 (187)
T ss_pred CCccEEEEEecCCcccCHHHHH---HHh-cCceEEEEeCCCCCC--ccHHHHHHHHHHhhC
Confidence 1228999999999999985443 334 455666778899985 345677778888863
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.5e-15 Score=107.73 Aligned_cols=197 Identities=21% Similarity=0.146 Sum_probs=137.9
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc--c---
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI--Q--- 101 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~--~--- 101 (273)
..+..++ .++..+...| ......|.||++|++.+-. ...+.+.+.|++. |.|+++|+-+......... .
T Consensus 5 v~~~~~~-~~~~~~~a~P---~~~~~~P~VIv~hei~Gl~-~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~ 79 (236)
T COG0412 5 VTIPAPD-GELPAYLARP---AGAGGFPGVIVLHEIFGLN-PHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAEL 79 (236)
T ss_pred eEeeCCC-ceEeEEEecC---CcCCCCCEEEEEecccCCc-hHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHH
Confidence 4556645 5565544432 2233449999999988877 7889999999888 9999999876332221111 0
Q ss_pred -------ccHHHHHHHHHHHHHHhC------CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhh
Q 024042 102 -------RTELFQAASLGKLLEKIG------VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVK 168 (273)
Q Consensus 102 -------~~~~~~~~~~~~~~~~~~------~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~ 168 (273)
.+......++.+.++.+. .++|.++|+||||.+++.++.+.| .+++.+..-+........
T Consensus 80 ~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~~------ 152 (236)
T COG0412 80 ETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDTA------ 152 (236)
T ss_pred hhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCccc------
Confidence 112455666666666652 467999999999999999999977 688888876644322110
Q ss_pred hhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc---CCcEEEE
Q 024042 169 RANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG---KKARLEI 245 (273)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~ 245 (273)
...++..|+|+..|+.|..+|.+..+.+.+.+. .+.++.+
T Consensus 153 -------------------------------------~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~ 195 (236)
T COG0412 153 -------------------------------------DAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEI 195 (236)
T ss_pred -------------------------------------ccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEE
Confidence 022344499999999999999998888887772 3678899
Q ss_pred eCCCCCCcCcCC-----------hhhHHHHHHHHhcccC
Q 024042 246 IENTSHVPQIEN-----------PGLFNSIVKNFLRGSL 273 (273)
Q Consensus 246 ~~~~gH~~~~~~-----------~~~~~~~i~~fl~~~l 273 (273)
++++.|.++.+. .+.-++.+.+|+++.+
T Consensus 196 y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 196 YPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred eCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 999889876432 1456677888887653
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-16 Score=119.40 Aligned_cols=124 Identities=19% Similarity=0.254 Sum_probs=84.7
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH-HHH-hhcCC-CeEEeecCCCCCCCCCCCccccH
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK-QVQ-FFAPH-FNVYVPDLIFFGHSTTRSIQRTE 104 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~-~~~-~l~~~-~~v~~~d~~g~g~s~~~~~~~~~ 104 (273)
+.+...++..+.+... +.++|++|++||++++....|.. +.. .+... ++|+++|+++++.+..+......
T Consensus 17 ~~~~~~~~~~~~~~~f-------~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~ 89 (275)
T cd00707 17 QLLFADDPSSLKNSNF-------NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNT 89 (275)
T ss_pred eEecCCChhhhhhcCC-------CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhH
Confidence 3344334445555555 45688999999998876344543 443 44444 99999999987433322222234
Q ss_pred HHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 105 LFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 105 ~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
....+++..+++.+ +.++++++|||+||++|..++.+++++++++++++|....
T Consensus 90 ~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 90 RVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 44445555555543 3478999999999999999999999999999999987654
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=108.87 Aligned_cols=225 Identities=20% Similarity=0.202 Sum_probs=141.1
Q ss_pred CCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCC----Ccc-------
Q 024042 33 DDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTR----SIQ------- 101 (273)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~----~~~------- 101 (273)
.+|.+|..|..-|. ...++.|.||-.||+++.. ..|..+..+-..+|.|+.+|.||.|.|... +..
T Consensus 64 ~~g~rI~gwlvlP~--~~~~~~P~vV~fhGY~g~~-g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~m 140 (321)
T COG3458 64 YGGARIKGWLVLPR--HEKGKLPAVVQFHGYGGRG-GEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFM 140 (321)
T ss_pred cCCceEEEEEEeec--ccCCccceEEEEeeccCCC-CCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCcee
Confidence 37888887776532 2236789999999999998 788788877777899999999999988421 110
Q ss_pred ----------ccHHHHHHHHHHHHHH------hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHH
Q 024042 102 ----------RTELFQAASLGKLLEK------IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA 165 (273)
Q Consensus 102 ----------~~~~~~~~~~~~~~~~------~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~ 165 (273)
+-......|+..+++. .+.++|.+.|.|.||.+++.++...| ++++++.+-|...........
T Consensus 141 trGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~i~~ 219 (321)
T COG3458 141 TRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRAIEL 219 (321)
T ss_pred EeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchhheee
Confidence 1111122233333332 24589999999999999999998875 699999888866543221110
Q ss_pred HhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEE
Q 024042 166 LVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEI 245 (273)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (273)
........+...+....+....-+....+. .-..+..++..|+|+..|-.|+++|+...-..++++...+++.+
T Consensus 220 -~~~~~ydei~~y~k~h~~~e~~v~~TL~yf-----D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~i 293 (321)
T COG3458 220 -ATEGPYDEIQTYFKRHDPKEAEVFETLSYF-----DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEI 293 (321)
T ss_pred -cccCcHHHHHHHHHhcCchHHHHHHHHhhh-----hhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEE
Confidence 000000111111111111111111111111 12334566777999999999999999999999999977788888
Q ss_pred eCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 246 IENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 246 ~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
++.-+|... |....+.+..|++
T Consensus 294 y~~~aHe~~---p~~~~~~~~~~l~ 315 (321)
T COG3458 294 YPYFAHEGG---PGFQSRQQVHFLK 315 (321)
T ss_pred eeccccccC---cchhHHHHHHHHH
Confidence 887778643 3333444555554
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.3e-14 Score=107.32 Aligned_cols=235 Identities=17% Similarity=0.072 Sum_probs=136.8
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch----hHhHHHHHHhhcCC--CeEEeecCCCCCCCCCCCc
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA----IWQWRKQVQFFAPH--FNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~----~~~~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~ 100 (273)
...+.......+..+.+.|.........|.|||+||+|..- ...|..+...++.. ..|+++|||--.+...+.
T Consensus 63 ~~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa- 141 (336)
T KOG1515|consen 63 SKDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPA- 141 (336)
T ss_pred eeeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCc-
Confidence 35555554445566666554444346889999999976221 25677777777554 889999999655544443
Q ss_pred cccHHHHHHHHHHHHHH------hCCccEEEEEeccchHHHHHHHHhC------CcccceEEEecCCCCCCCcchHHHhh
Q 024042 101 QRTELFQAASLGKLLEK------IGVERFSVVGTSYGGFVAYHMARMW------PERVEKVVIASSGVNMKRGDNEALVK 168 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~------~~~~~i~l~G~S~Gg~~a~~~a~~~------~~~v~~~v~~~~~~~~~~~~~~~~~~ 168 (273)
..++..+.+..+.++ .+.++++|+|-|.||.+|..++.+. +.++++.|++-|..............
T Consensus 142 --~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~ 219 (336)
T KOG1515|consen 142 --AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQ 219 (336)
T ss_pred --cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHH
Confidence 344444444444442 2558899999999999999988753 34699999999988765443322221
Q ss_pred hhhhhhhhhccCCCChHHHHHHhhhhh------ccCCCCChhh------HHhhhhccEEEEecCCCCCCChHHHHHHHHH
Q 024042 169 RANLERIDHLMLPESASQLRTLTGLAV------SKNLDIVPDF------FFNDFVHDVLIVWGDQDQIFPLKMATELKEL 236 (273)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~------~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~ 236 (273)
..... ..........++.... .......+.. ..-....|++++.++.|.+. +....++++
T Consensus 220 ~~~~~------~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~ 291 (336)
T KOG1515|consen 220 NLNGS------PELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEK 291 (336)
T ss_pred hhcCC------cchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHH
Confidence 11100 0111111111111000 0000001110 11112227999999999885 334444444
Q ss_pred h---cCCcEEEEeCCCCCCcCcC-----ChhhHHHHHHHHhccc
Q 024042 237 L---GKKARLEIIENTSHVPQIE-----NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 237 ~---~~~~~~~~~~~~gH~~~~~-----~~~~~~~~i~~fl~~~ 272 (273)
+ +.++++..++++.|.++.- ...++.+.+.+|+++.
T Consensus 292 Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 292 LKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred HHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 3 3667777899999976543 3347778888888764
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-13 Score=107.39 Aligned_cols=217 Identities=12% Similarity=0.132 Sum_probs=140.1
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchH
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGF 133 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~ 133 (273)
.|+|+++..+.+.....-+.+++.|-+++.|+..|+..-+.........+++++++.+.+.+++++.+ ++++|+|+||.
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~ 180 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAV 180 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhH
Confidence 37899998887666344566777776799999999986665544455678899999999999999877 99999999999
Q ss_pred HHHHHHHhC-----CcccceEEEecCCCCCCCc-c-hHHHhhhhhhhhhhhc-------------------------c--
Q 024042 134 VAYHMARMW-----PERVEKVVIASSGVNMKRG-D-NEALVKRANLERIDHL-------------------------M-- 179 (273)
Q Consensus 134 ~a~~~a~~~-----~~~v~~~v~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-------------------------~-- 179 (273)
+++.+++.. |.+++++++++++.+.... . ...+........+... +
T Consensus 181 ~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~ 260 (406)
T TIGR01849 181 PVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFIS 260 (406)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHH
Confidence 877666544 6679999999999887653 1 1111110000000000 0
Q ss_pred -CCCC-hHHHHHHhhhh-----------------hccCCCCChhhH---------------------------Hhhhh-c
Q 024042 180 -LPES-ASQLRTLTGLA-----------------VSKNLDIVPDFF---------------------------FNDFV-H 212 (273)
Q Consensus 180 -~~~~-~~~~~~~~~~~-----------------~~~~~~~~~~~~---------------------------~~~~~-~ 212 (273)
.+.. ......+.... +... ...+..+ ..++. +
T Consensus 261 mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~-~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~ 339 (406)
T TIGR01849 261 MNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAV-MDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRV 339 (406)
T ss_pred cCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhc-cCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCccc
Confidence 0000 00000000000 0000 1111111 22333 3
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHh---c-CCcEEEEeCCCCCCcCc---CChhhHHHHHHHHhccc
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELL---G-KKARLEIIENTSHVPQI---ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~gH~~~~---~~~~~~~~~i~~fl~~~ 272 (273)
|+|.+.|++|.++|+.+++.+.+.+ + .+.+.+..+++||...+ ..++++...|.+||.++
T Consensus 340 pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 340 ALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred ceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 9999999999999999999998875 3 34557777789998654 34578899999999764
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.1e-15 Score=109.58 Aligned_cols=129 Identities=23% Similarity=0.394 Sum_probs=103.0
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC--------C--CeEEeecCCCCCCC
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP--------H--FNVYVPDLIFFGHS 95 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~--------~--~~v~~~d~~g~g~s 95 (273)
.+...++ .|.++|+....++.......-.+++++|||+++- ..+-.+++.|.. . |.|+++.+||+|.|
T Consensus 125 ~qykTeI-eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv-~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwS 202 (469)
T KOG2565|consen 125 KQYKTEI-EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSV-REFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWS 202 (469)
T ss_pred hhhhhhh-cceeEEEEEecCCccccCCcccceEEecCCCchH-HHHHhhhhhhcCccccCCccceeEEEeccCCCCcccC
Confidence 3444455 8999999887644333344456899999999999 777777776643 2 79999999999999
Q ss_pred CCCCc-cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCC
Q 024042 96 TTRSI-QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV 156 (273)
Q Consensus 96 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~ 156 (273)
+.+.. .....+.+..++.++-+++.+++.+-|-.+|+.++..+|..+|++|.|+-+-.+..
T Consensus 203 d~~sk~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~ 264 (469)
T KOG2565|consen 203 DAPSKTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFV 264 (469)
T ss_pred cCCccCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhccccc
Confidence 97754 45777788889999999999999999999999999999999999998876644433
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-14 Score=119.75 Aligned_cols=124 Identities=16% Similarity=0.101 Sum_probs=92.2
Q ss_pred ecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhH---hH-HHHHHhhcC-CCeEEeecCCCCCCCCCCCccccHH
Q 024042 31 DIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIW---QW-RKQVQFFAP-HFNVYVPDLIFFGHSTTRSIQRTEL 105 (273)
Q Consensus 31 ~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~---~~-~~~~~~l~~-~~~v~~~d~~g~g~s~~~~~~~~~~ 105 (273)
+..||.+|++..+.|+ ..++.|+||++||++.+. . .+ ......|.+ +|.|+++|+||+|.|........ .
T Consensus 2 ~~~DG~~L~~~~~~P~---~~~~~P~Il~~~gyg~~~-~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~ 76 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPA---GGGPVPVILSRTPYGKDA-GLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-S 76 (550)
T ss_pred cCCCCCEEEEEEEecC---CCCCCCEEEEecCCCCch-hhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-c
Confidence 4568999998776532 234679999999998764 2 11 123344544 59999999999999987644333 4
Q ss_pred HHHHHHHHHHHHhC-----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC
Q 024042 106 FQAASLGKLLEKIG-----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK 159 (273)
Q Consensus 106 ~~~~~~~~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~ 159 (273)
..++|+.++++.+. ..+++++|+|+||.+++.+|..+|+.+++++..++..+..
T Consensus 77 ~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 77 DEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLY 135 (550)
T ss_pred ccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchh
Confidence 55667777776652 2589999999999999999999999999999988776543
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-14 Score=101.45 Aligned_cols=233 Identities=15% Similarity=0.098 Sum_probs=138.8
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCC-eEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc---c
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKP-SLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ---R 102 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~-~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~---~ 102 (273)
..+..+||..+....++ .+++.+ .++.-.+.+... ..|++++...++. |.|+.+|+||.|+|...... .
T Consensus 8 ~~l~~~DG~~l~~~~~p-----A~~~~~g~~~va~a~Gv~~-~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~ 81 (281)
T COG4757 8 AHLPAPDGYSLPGQRFP-----ADGKASGRLVVAGATGVGQ-YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQW 81 (281)
T ss_pred cccccCCCccCcccccc-----CCCCCCCcEEecccCCcch-hHhHHHHHHhhccCceEEEEecccccCCCccccccCcc
Confidence 34667799999888885 233333 455555566665 8899999988887 99999999999999876543 2
Q ss_pred cHHHHH-HHHHHHH----HHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHH----hhhhh--
Q 024042 103 TELFQA-ASLGKLL----EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL----VKRAN-- 171 (273)
Q Consensus 103 ~~~~~~-~~~~~~~----~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~----~~~~~-- 171 (273)
...+.+ .|+...+ +.+...+...+|||+||++.-.+.+. + +..+....+.+........... ....+
T Consensus 82 ~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~-~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv 159 (281)
T COG4757 82 RYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQH-P-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLV 159 (281)
T ss_pred chhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccccC-c-ccceeeEeccccccccchhhhhcccceeecccc
Confidence 222221 2333333 33345789999999999887666554 3 4555554444333222110000 00000
Q ss_pred ---hh----hhhhccC----CCChHHHHH---Hhhhhhc--c-CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHH
Q 024042 172 ---LE----RIDHLML----PESASQLRT---LTGLAVS--K-NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELK 234 (273)
Q Consensus 172 ---~~----~~~~~~~----~~~~~~~~~---~~~~~~~--~-~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~ 234 (273)
.. .+...+. ......++. +.+...+ . .......+.++.+..|++.+...+|+.+|+...+.+.
T Consensus 160 ~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~ 239 (281)
T COG4757 160 GPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFA 239 (281)
T ss_pred ccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHH
Confidence 00 0000000 111122222 2222211 1 1111234556777779999999999999999999998
Q ss_pred HHhcCCc--EEEEeCC----CCCCcCcCCh-hhHHHHHHHHh
Q 024042 235 ELLGKKA--RLEIIEN----TSHVPQIENP-GLFNSIVKNFL 269 (273)
Q Consensus 235 ~~~~~~~--~~~~~~~----~gH~~~~~~~-~~~~~~i~~fl 269 (273)
+.. .++ +...++. .||+....++ |.+.+.+.+|+
T Consensus 240 ~~y-~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 240 SFY-RNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred Hhh-hcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 887 444 4444443 5999877777 78888888876
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.8e-13 Score=96.29 Aligned_cols=223 Identities=17% Similarity=0.251 Sum_probs=119.2
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCC-CCCCCCCccccH
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFF-GHSTTRSIQRTE 104 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-g~s~~~~~~~~~ 104 (273)
.+-+.+.+|.+++.|+..|++. ...+.++||+.+|++... ..+..++.+|+.+ |+|+.+|--.| |.|++....+++
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~-~~~~~~tiliA~Gf~rrm-dh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftm 81 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNN-EPKRNNTILIAPGFARRM-DHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTM 81 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TT-S---S-EEEEE-TT-GGG-GGGHHHHHHHHTTT--EEEE---B-------------H
T ss_pred cceeEcCCCCEEEEeccCCCCC-CcccCCeEEEecchhHHH-HHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcch
Confidence 3567788999999999886543 234568999999999888 9999999999988 99999998765 888888878888
Q ss_pred HHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc--
Q 024042 105 LFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM-- 179 (273)
Q Consensus 105 ~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 179 (273)
....+++..+++.+ +..++.|+.-|+.|-+|+..+.+- .+.-+|...+..++.. .+.+......+....
T Consensus 82 s~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~----TLe~al~~Dyl~~~i~~ 155 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRD----TLEKALGYDYLQLPIEQ 155 (294)
T ss_dssp HHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHH----HHHHHHSS-GGGS-GGG
T ss_pred HHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHH----HHHHHhccchhhcchhh
Confidence 77777766666554 778999999999999999999864 3777777776665432 222222111111100
Q ss_pred CCCCh------HHHHHHhhhhhccCCC--CChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCCCC
Q 024042 180 LPESA------SQLRTLTGLAVSKNLD--IVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTS 250 (273)
Q Consensus 180 ~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~g 250 (273)
.+... -....+....+..... .......+++..|++.+++.+|.+|....+..+.+..+ ..++++.++|++
T Consensus 156 lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~ 235 (294)
T PF02273_consen 156 LPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSS 235 (294)
T ss_dssp --SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-S
T ss_pred CCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCcc
Confidence 00000 0001111111111111 12233455667799999999999999999888888663 678899999999
Q ss_pred CCcCcCCh
Q 024042 251 HVPQIENP 258 (273)
Q Consensus 251 H~~~~~~~ 258 (273)
|... |++
T Consensus 236 HdL~-enl 242 (294)
T PF02273_consen 236 HDLG-ENL 242 (294)
T ss_dssp S-TT-SSH
T ss_pred chhh-hCh
Confidence 9863 444
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.4e-15 Score=107.77 Aligned_cols=189 Identities=20% Similarity=0.150 Sum_probs=100.3
Q ss_pred EEEEcCCCCch--hHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH-----hCCccEEEEE
Q 024042 57 LVLIHGFGPEA--IWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK-----IGVERFSVVG 127 (273)
Q Consensus 57 vi~~hG~~~~~--~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~G 127 (273)
||++||.+... ......+...+.+ ++.|+.+|||-..+... ....++..+.+..++++ .+.++|+++|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~---p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G 77 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPF---PAALEDVKAAYRWLLKNADKLGIDPERIVLIG 77 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSST---THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccc---cccccccccceeeeccccccccccccceEEee
Confidence 79999966322 1334445555543 49999999995433221 22334444444444444 3457999999
Q ss_pred eccchHHHHHHHHhCCc----ccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhh----ccCC
Q 024042 128 TSYGGFVAYHMARMWPE----RVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAV----SKNL 199 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 199 (273)
+|.||.+|+.++....+ .++++++++|+.+............... ...... ............. ....
T Consensus 78 ~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 153 (211)
T PF07859_consen 78 DSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNEN--KDDPFL--PAPKIDWFWKLYLPGSDRDDP 153 (211)
T ss_dssp ETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHH--STTSSS--BHHHHHHHHHHHHSTGGTTST
T ss_pred cccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccc--cccccc--ccccccccccccccccccccc
Confidence 99999999999976433 3899999999776611111111100000 000011 1122222111111 0001
Q ss_pred CCChhhH-HhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcC
Q 024042 200 DIVPDFF-FNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQ 254 (273)
Q Consensus 200 ~~~~~~~-~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~ 254 (273)
...|... ...-..|+++++|+.|.++ +....+.+++ +.+++++++++.+|.+.
T Consensus 154 ~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 154 LASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp TTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred ccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 1111111 0111239999999999875 4556666665 46789999999999754
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.7e-13 Score=109.60 Aligned_cols=197 Identities=16% Similarity=0.192 Sum_probs=123.1
Q ss_pred CCCCCeEEEEcCCCCchhHhH-----HHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh----CC
Q 024042 51 TLKKPSLVLIHGFGPEAIWQW-----RKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI----GV 120 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~~ 120 (273)
...+++||+++.+-... ..+ +.++++|.++ +.|+++|+++-+... ...+++++++.+.+.++.+ +.
T Consensus 212 ~v~~~PLLIVPp~INK~-YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG~ 287 (560)
T TIGR01839 212 QQHARPLLVVPPQINKF-YIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITGS 287 (560)
T ss_pred CcCCCcEEEechhhhhh-heeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 34567999999976444 444 4677777666 999999999755543 2346666666665555554 66
Q ss_pred ccEEEEEeccchHHHHH----HHHhCCc-ccceEEEecCCCCCCCcch-H------HH------hhhhhh------hhhh
Q 024042 121 ERFSVVGTSYGGFVAYH----MARMWPE-RVEKVVIASSGVNMKRGDN-E------AL------VKRANL------ERID 176 (273)
Q Consensus 121 ~~i~l~G~S~Gg~~a~~----~a~~~~~-~v~~~v~~~~~~~~~~~~~-~------~~------~~~~~~------~~~~ 176 (273)
+++.++|+|+||.++.. +++++++ +|++++++.+..++..... . .+ ....+. ....
T Consensus 288 ~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F 367 (560)
T TIGR01839 288 RDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVF 367 (560)
T ss_pred CCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHH
Confidence 89999999999999886 7777775 7999999998887653220 0 00 000000 0000
Q ss_pred hccCCC--------------------------------ChHHHHHHhhhhhccCCCCCh--------hhHHhhhhccEEE
Q 024042 177 HLMLPE--------------------------------SASQLRTLTGLAVSKNLDIVP--------DFFFNDFVHDVLI 216 (273)
Q Consensus 177 ~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~p~l~ 216 (273)
..+.+. .......+. ..+..+....+ ...+.++.+|+++
T Consensus 368 ~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l-~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~ 446 (560)
T TIGR01839 368 AWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLL-DMFKSNPLTRPDALEVCGTPIDLKKVKCDSFS 446 (560)
T ss_pred HhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHH-HHHhcCCCCCCCCEEECCEEechhcCCCCeEE
Confidence 000000 001111111 11111111110 1124455569999
Q ss_pred EecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCc
Q 024042 217 VWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVP 253 (273)
Q Consensus 217 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 253 (273)
+.|++|.++|.+.+..+.+.++.+.+++..+ +||..
T Consensus 447 va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~-gGHIg 482 (560)
T TIGR01839 447 VAGTNDHITPWDAVYRSALLLGGKRRFVLSN-SGHIQ 482 (560)
T ss_pred EecCcCCcCCHHHHHHHHHHcCCCeEEEecC-CCccc
Confidence 9999999999999999999986677777776 89963
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.4e-13 Score=107.89 Aligned_cols=228 Identities=19% Similarity=0.143 Sum_probs=151.6
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHh-----HHHHHHhhcCC-CeEEeecCCCCCCCCCC-
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQ-----WRKQVQFFAPH-FNVYVPDLIFFGHSTTR- 98 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~-----~~~~~~~l~~~-~~v~~~d~~g~g~s~~~- 98 (273)
..++.+.|.+++.-.+.|.+....++-|+++++-|.++-. ... +-++ ..|+.. |.|+.+|-||.-.....
T Consensus 616 f~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~-~~LaslGy~Vv~IDnRGS~hRGlkF 694 (867)
T KOG2281|consen 616 FSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRF-CRLASLGYVVVFIDNRGSAHRGLKF 694 (867)
T ss_pred eeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhh-hhhhhcceEEEEEcCCCccccchhh
Confidence 4456778888888888887777778899999999977432 011 1222 344444 99999999986544322
Q ss_pred -------CccccHHHHHHHHHHHHHHhC---CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhh
Q 024042 99 -------SIQRTELFQAASLGKLLEKIG---VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVK 168 (273)
Q Consensus 99 -------~~~~~~~~~~~~~~~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~ 168 (273)
.....++++++.+..+.++.+ .++|.+-|||+||.++++...++|+-++.+|.-+|.............+
T Consensus 695 E~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTER 774 (867)
T KOG2281|consen 695 ESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTER 774 (867)
T ss_pred HHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhh
Confidence 223478888999999988874 4899999999999999999999999888777766655543221111111
Q ss_pred hhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEE
Q 024042 169 RANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEI 245 (273)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~ 245 (273)
.++....... ......+...... .| +-....|++||--|+.|.......+.+.+ ++.-++++
T Consensus 775 YMg~P~~nE~--gY~agSV~~~Vek--------lp-----depnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~I 839 (867)
T KOG2281|consen 775 YMGYPDNNEH--GYGAGSVAGHVEK--------LP-----DEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQI 839 (867)
T ss_pred hcCCCccchh--cccchhHHHHHhh--------CC-----CCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEE
Confidence 1111100000 0001111111111 11 11114899999999999988888887776 57789999
Q ss_pred eCCCCCCcC-cCChhhHHHHHHHHhcc
Q 024042 246 IENTSHVPQ-IENPGLFNSIVKNFLRG 271 (273)
Q Consensus 246 ~~~~gH~~~-~~~~~~~~~~i~~fl~~ 271 (273)
+|+.-|..- .+........+..||++
T Consensus 840 fP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 840 FPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred ccccccccCCCccchhHHHHHHHHHhh
Confidence 999999853 35556777888899876
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-13 Score=115.83 Aligned_cols=231 Identities=18% Similarity=0.141 Sum_probs=152.5
Q ss_pred hhCCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch------hHhHHHHHHhhcCC-CeEEeecCCCCC
Q 024042 21 ASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA------IWQWRKQVQFFAPH-FNVYVPDLIFFG 93 (273)
Q Consensus 21 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~------~~~~~~~~~~l~~~-~~v~~~d~~g~g 93 (273)
.....+...+.. +|...++....|++....++-|.++.+||..++. .-.|... ..... +.|+.+|.||.|
T Consensus 494 ~~p~~~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~ 570 (755)
T KOG2100|consen 494 ALPIVEFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSG 570 (755)
T ss_pred cCCcceeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcC
Confidence 344556777777 9999999988877766677788999999987632 1223332 23333 999999999977
Q ss_pred CCCCCC--------ccccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcc-cceEEEecCCCCCCCcc
Q 024042 94 HSTTRS--------IQRTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPER-VEKVVIASSGVNMKRGD 162 (273)
Q Consensus 94 ~s~~~~--------~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~-v~~~v~~~~~~~~~~~~ 162 (273)
...... .....+++...+..+++.. +.+++.++|+|+||.+++.++...++. ++..+.++|..++.-.
T Consensus 571 ~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~y- 649 (755)
T KOG2100|consen 571 GYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYY- 649 (755)
T ss_pred CcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeee-
Confidence 654321 1235666666666666654 458899999999999999999998744 5566999998876521
Q ss_pred hHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccE-EEEecCCCCCCChHHHHHHHHHh---c
Q 024042 163 NEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDV-LIVWGDQDQIFPLKMATELKELL---G 238 (273)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-l~i~g~~D~~~~~~~~~~~~~~~---~ 238 (273)
........ ...+...... .. ...+......+..|. |++||+.|..|+.+++..+.+++ +
T Consensus 650 ds~~tery-------mg~p~~~~~~--y~--------e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~g 712 (755)
T KOG2100|consen 650 DSTYTERY-------MGLPSENDKG--YE--------ESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAG 712 (755)
T ss_pred cccccHhh-------cCCCccccch--hh--------hccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCC
Confidence 11111100 0011111100 00 112222233334455 99999999999999999998887 3
Q ss_pred CCcEEEEeCCCCCCcCcCC-hhhHHHHHHHHhccc
Q 024042 239 KKARLEIIENTSHVPQIEN-PGLFNSIVKNFLRGS 272 (273)
Q Consensus 239 ~~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~~ 272 (273)
-..+..++|+.+|.+.... -..+...+..|+..+
T Consensus 713 v~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 713 VPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDC 747 (755)
T ss_pred CceEEEEeCCCCcccccccchHHHHHHHHHHHHHH
Confidence 4588999999999876533 256778888888754
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.6e-13 Score=87.51 Aligned_cols=182 Identities=14% Similarity=0.128 Sum_probs=123.6
Q ss_pred CCCCCeEEEEcCCCCch-hHhHHHHHHhhcCC-CeEEeecCCCC-----CCCCCCCcc-ccHHHHHHHHHHHHHHhCCcc
Q 024042 51 TLKKPSLVLIHGFGPEA-IWQWRKQVQFFAPH-FNVYVPDLIFF-----GHSTTRSIQ-RTELFQAASLGKLLEKIGVER 122 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~-~~~~~~~~~~l~~~-~~v~~~d~~g~-----g~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 122 (273)
+...-+||+.||.|.+. +.....++..|+.. +.|..++++.. |...+++.. .-...+...+.++.+.+...+
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gp 90 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGP 90 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCc
Confidence 34455899999987655 25567778888877 99999998742 322222222 234455666777777777679
Q ss_pred EEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCC
Q 024042 123 FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIV 202 (273)
Q Consensus 123 i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (273)
+++-|+||||-++.+++......|+++++++-++..+... +. .
T Consensus 91 Li~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKP----------------------e~---------------~ 133 (213)
T COG3571 91 LIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKP----------------------EQ---------------L 133 (213)
T ss_pred eeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCc----------------------cc---------------c
Confidence 9999999999999999987666699999988666544221 11 1
Q ss_pred hhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcC----------ChhhHHHHHHHHhcc
Q 024042 203 PDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE----------NPGLFNSIVKNFLRG 271 (273)
Q Consensus 203 ~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----------~~~~~~~~i~~fl~~ 271 (273)
....+..+..|++|.+|+.|++-..+.+... .+.+..++++++++.|..--. +-...++.+..|+.+
T Consensus 134 Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y--~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 134 RTEHLTGLKTPTLITQGTRDEFGTRDEVAGY--ALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred hhhhccCCCCCeEEeecccccccCHHHHHhh--hcCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 1122334455999999999999877766332 234789999999999964321 223455666667653
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-13 Score=100.36 Aligned_cols=176 Identities=20% Similarity=0.229 Sum_probs=111.2
Q ss_pred CCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh-------CCc
Q 024042 50 KTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI-------GVE 121 (273)
Q Consensus 50 ~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 121 (273)
..+.-|+|||+||+.... ..|..+++.+++. |.|+.+|+...+............+..+++.+-++.. +..
T Consensus 13 ~~g~yPVv~f~~G~~~~~-s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s 91 (259)
T PF12740_consen 13 SAGTYPVVLFLHGFLLIN-SWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFS 91 (259)
T ss_pred CCCCcCEEEEeCCcCCCH-HHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhcccccccccc
Confidence 356789999999999776 6799999999998 9999999765433221111123333333333322221 346
Q ss_pred cEEEEEeccchHHHHHHHHhC-----CcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhc
Q 024042 122 RFSVVGTSYGGFVAYHMARMW-----PERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVS 196 (273)
Q Consensus 122 ~i~l~G~S~Gg~~a~~~a~~~-----~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (273)
++.|.|||.||-+|..++..+ +.+++++++++|.-....... ..+ ..+..
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~---------------~~P---~v~~~------- 146 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQ---------------TEP---PVLTY------- 146 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccC---------------CCC---ccccC-------
Confidence 899999999999999999887 457999999999764321100 000 00000
Q ss_pred cCCCCChhhHHhhhhccEEEEecCCCCC---------CCh-HHHHHHHHHhcCCcEEEEeCCCCCCcCcCCh
Q 024042 197 KNLDIVPDFFFNDFVHDVLIVWGDQDQI---------FPL-KMATELKELLGKKARLEIIENTSHVPQIENP 258 (273)
Q Consensus 197 ~~~~~~~~~~~~~~~~p~l~i~g~~D~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 258 (273)
.+. .-+...|+++|-.+-+.. .|. ..-+++++.+....-..+..+.||+-+++..
T Consensus 147 -----~p~--s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 147 -----TPQ--SFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred -----ccc--ccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhcCC
Confidence 000 001123899887766642 222 2567787777555556667889999877655
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=7e-13 Score=88.86 Aligned_cols=174 Identities=11% Similarity=0.049 Sum_probs=113.2
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchH
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGF 133 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~ 133 (273)
.+.+|++||++++....|....+.-. -.+-.+++. .......+++++.+.+.+... .++++||+||+|+.
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we~~l--~~a~rveq~-------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~ 71 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWESAL--PNARRVEQD-------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCA 71 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHHhhC--ccchhcccC-------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHH
Confidence 35689999998887566655443211 223333332 112236666777777666665 36799999999999
Q ss_pred HHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhcc
Q 024042 134 VAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHD 213 (273)
Q Consensus 134 ~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 213 (273)
+++.++.+....|.|+++++|+............ .. ........+.-|
T Consensus 72 ~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~-------------------------~t-------f~~~p~~~lpfp 119 (181)
T COG3545 72 TVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHL-------------------------MT-------FDPIPREPLPFP 119 (181)
T ss_pred HHHHHHHhhhhccceEEEecCCCccccccchhhc-------------------------cc-------cCCCccccCCCc
Confidence 9999999877789999999986543321100000 00 000011122228
Q ss_pred EEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc---CChhhHHHHHHHHhcc
Q 024042 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI---ENPGLFNSIVKNFLRG 271 (273)
Q Consensus 214 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~i~~fl~~ 271 (273)
.+++.+.+|++++++.++.+++.+ ...++...++||+.-. ..-.+....+.+|+.+
T Consensus 120 s~vvaSrnDp~~~~~~a~~~a~~w--gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 120 SVVVASRNDPYVSYEHAEDLANAW--GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred eeEEEecCCCCCCHHHHHHHHHhc--cHhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 999999999999999999999998 5677888889997532 2234555666666543
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.3e-13 Score=103.57 Aligned_cols=220 Identities=16% Similarity=0.100 Sum_probs=118.4
Q ss_pred EEeecCCccCCCCCCCCCeEEEEcCCCC---chhHhHHHHH-HhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHH
Q 024042 38 LHFWGPKLEDDHKTLKKPSLVLIHGFGP---EAIWQWRKQV-QFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLG 112 (273)
Q Consensus 38 l~~~~~~~~~~~~~~~~~~vi~~hG~~~---~~~~~~~~~~-~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~ 112 (273)
+.+..+.+ ........|+||++||.+. +. ....... ..+... +.|+++|||-..+-..+....+......++.
T Consensus 64 ~~~~~y~p-~~~~~~~~p~vly~HGGg~~~g~~-~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~ 141 (312)
T COG0657 64 VPVRVYRP-DRKAAATAPVVLYLHGGGWVLGSL-RTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLR 141 (312)
T ss_pred eeEEEECC-CCCCCCCCcEEEEEeCCeeeecCh-hhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHH
Confidence 44444442 1133456899999999662 33 3343333 333333 9999999996554433322222222333333
Q ss_pred HHHHHhC--CccEEEEEeccchHHHHHHHHhCCc----ccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHH
Q 024042 113 KLLEKIG--VERFSVVGTSYGGFVAYHMARMWPE----RVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQ 186 (273)
Q Consensus 113 ~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (273)
+-...++ .++|+++|+|.||++++.++....+ ...+.+++.|..+... .......... ........
T Consensus 142 ~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~~~~-------~~~~~~~~ 213 (312)
T COG0657 142 ANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPGYGE-------ADLLDAAA 213 (312)
T ss_pred hhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhhcCC-------ccccCHHH
Confidence 3333333 5889999999999999999876543 4788999999877664 1100000000 00001111
Q ss_pred HHHHhhhhhccC----C--CCChh--hHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCc
Q 024042 187 LRTLTGLAVSKN----L--DIVPD--FFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQI 255 (273)
Q Consensus 187 ~~~~~~~~~~~~----~--~~~~~--~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~ 255 (273)
........+... . ...|. ..... ..|+++++|+.|.+.+ ..+.+.+++ +..+++..+++..|.+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~ 290 (312)
T COG0657 214 ILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFDL 290 (312)
T ss_pred HHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcceeccc
Confidence 110111111000 0 00110 00223 4499999999999977 444554444 467899999999996533
Q ss_pred CC-hh--hHHHHHHHHhc
Q 024042 256 EN-PG--LFNSIVKNFLR 270 (273)
Q Consensus 256 ~~-~~--~~~~~i~~fl~ 270 (273)
-. +. .....+.+|+.
T Consensus 291 ~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 291 LTGPEARSALRQIAAFLR 308 (312)
T ss_pred cCcHHHHHHHHHHHHHHH
Confidence 32 21 22344555554
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-13 Score=102.51 Aligned_cols=215 Identities=17% Similarity=0.249 Sum_probs=126.5
Q ss_pred CCCCeEEEEcCCCCchhHhHHHH-H-HhhcCCCeEEeecCCCCCCCCCCCccc----cHHH----------HHHHHHHHH
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQ-V-QFFAPHFNVYVPDLIFFGHSTTRSIQR----TELF----------QAASLGKLL 115 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~-~-~~l~~~~~v~~~d~~g~g~s~~~~~~~----~~~~----------~~~~~~~~~ 115 (273)
+.+|.+|.++|.|......-+.+ + +.+.+++..+.+..|-||...+..... ...+ .+..+..++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 45889999999887662221223 3 444556999999999999876543321 1111 133345555
Q ss_pred HHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc---------hHHHhhhhhhhhhhhc---c----
Q 024042 116 EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD---------NEALVKRANLERIDHL---M---- 179 (273)
Q Consensus 116 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~---~---- 179 (273)
+..+..++.+.|.||||.+|..++...|..+..+-.+++........ +..+.+......+... .
T Consensus 170 ~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~~~ 249 (348)
T PF09752_consen 170 EREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIPAQN 249 (348)
T ss_pred HhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhcccccCc
Confidence 55688999999999999999999999998776666665543321111 2222222000000000 0
Q ss_pred ----------CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCC
Q 024042 180 ----------LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENT 249 (273)
Q Consensus 180 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (273)
.....+.......... . ...........-...+.++.+++|..+|.+.+..+.+.+ +++++..++ +
T Consensus 250 ~~~~~~~~~~~~~~~Ea~~~m~~~md-~-~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~W-PGsEvR~l~-g 325 (348)
T PF09752_consen 250 KSLPLDSMEERRRDREALRFMRGVMD-S-FTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIW-PGSEVRYLP-G 325 (348)
T ss_pred ccccchhhccccchHHHHHHHHHHHH-h-hccccccCCCCCCCcEEEEEecCceEechhhcchHHHhC-CCCeEEEec-C
Confidence 0000111111000000 0 000000000011116889999999999999999999999 999999998 5
Q ss_pred CCC-cCcCChhhHHHHHHHHhc
Q 024042 250 SHV-PQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 250 gH~-~~~~~~~~~~~~i~~fl~ 270 (273)
||. .++-+.+.+.+.|.+-++
T Consensus 326 GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 326 GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CcEEEeeechHHHHHHHHHHhh
Confidence 996 455667888888887664
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.6e-13 Score=113.18 Aligned_cols=112 Identities=13% Similarity=0.075 Sum_probs=83.8
Q ss_pred EEecCCcceEEeecCCccCC---CCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCC------
Q 024042 29 TIDIDDETTLHFWGPKLEDD---HKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTR------ 98 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~---~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~------ 98 (273)
.+..+++.++.|...+.... .+....|+||++||++++. ..|..+++.|.+. |+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~-~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAK-ENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCH-HHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccc
Confidence 44455777777766442110 1123457999999999999 8999999999865 99999999999999432
Q ss_pred ----Cc-------------cccHHHHHHHHHHHHHHhC----------------CccEEEEEeccchHHHHHHHHh
Q 024042 99 ----SI-------------QRTELFQAASLGKLLEKIG----------------VERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 99 ----~~-------------~~~~~~~~~~~~~~~~~~~----------------~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
.. ...+...+.|+..+...+. ..+++++||||||.++..++..
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 1256777888887777765 2589999999999999999875
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.5e-13 Score=120.73 Aligned_cols=200 Identities=14% Similarity=0.100 Sum_probs=125.0
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC-ccEEEEEeccc
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV-ERFSVVGTSYG 131 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~G 131 (273)
..++++++||++++. ..|..+.+.|..++.|+.++.+|++.+. ...+++++.++++.+.++.+.. .+++++|||+|
T Consensus 1067 ~~~~l~~lh~~~g~~-~~~~~l~~~l~~~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~G 1143 (1296)
T PRK10252 1067 DGPTLFCFHPASGFA-WQFSVLSRYLDPQWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLG 1143 (1296)
T ss_pred CCCCeEEecCCCCch-HHHHHHHHhcCCCCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechh
Confidence 357899999999998 8999999999888999999999998653 3457899999999998987754 58999999999
Q ss_pred hHHHHHHHHh---CCcccceEEEecCCCCCCCcc---------hHHHhhhh-hhhhhhhccCCC-ChHHHHHHhhhhhcc
Q 024042 132 GFVAYHMARM---WPERVEKVVIASSGVNMKRGD---------NEALVKRA-NLERIDHLMLPE-SASQLRTLTGLAVSK 197 (273)
Q Consensus 132 g~~a~~~a~~---~~~~v~~~v~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 197 (273)
|.+|..+|.+ .++++..++++++........ ........ ............ .......... .+..
T Consensus 1144 g~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 1222 (1296)
T PRK10252 1144 GTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGSLSTELFTTIEG-NYAD 1222 (1296)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhccccHHHHHHHHH-HHHH
Confidence 9999999986 467899999988643211000 00000000 000000000000 0000111100 0000
Q ss_pred CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCCh
Q 024042 198 NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP 258 (273)
Q Consensus 198 ~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 258 (273)
............+..|++++.+..|..........|.+.. .+.+...++ ++|+.+...+
T Consensus 1223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-~~~~~~~v~-g~H~~~~~~~ 1281 (1296)
T PRK10252 1223 AVRLLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI-AELDVYRQD-CAHVDIISPE 1281 (1296)
T ss_pred HHHHHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc-CCCEEEECC-CCHHHHCCcH
Confidence 0000000111234458999999988765555555666666 678888886 7999877544
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-13 Score=82.29 Aligned_cols=77 Identities=21% Similarity=0.298 Sum_probs=64.0
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc-ccHHHHHHHHH
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ-RTELFQAASLG 112 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~-~~~~~~~~~~~ 112 (273)
|.+|+++.+.| .++.+.+|+++||++.+. ..|..+++.|+++ |.|+++|+||||.|.+.... .+.+++++|+.
T Consensus 1 G~~L~~~~w~p----~~~~k~~v~i~HG~~eh~-~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~ 75 (79)
T PF12146_consen 1 GTKLFYRRWKP----ENPPKAVVVIVHGFGEHS-GRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLH 75 (79)
T ss_pred CcEEEEEEecC----CCCCCEEEEEeCCcHHHH-HHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHH
Confidence 56788888863 223588999999999998 8899999999988 99999999999999865544 47888899988
Q ss_pred HHHH
Q 024042 113 KLLE 116 (273)
Q Consensus 113 ~~~~ 116 (273)
.+++
T Consensus 76 ~~~~ 79 (79)
T PF12146_consen 76 QFIQ 79 (79)
T ss_pred HHhC
Confidence 8763
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.4e-11 Score=92.17 Aligned_cols=104 Identities=16% Similarity=0.210 Sum_probs=84.6
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhc----CCCeEEeecCCCCCCCCCC------CccccHHHHHHHHHHHHHHh-----
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFA----PHFNVYVPDLIFFGHSTTR------SIQRTELFQAASLGKLLEKI----- 118 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~----~~~~v~~~d~~g~g~s~~~------~~~~~~~~~~~~~~~~~~~~----- 118 (273)
+..++|++|.+|-. ..|..++..|. .++.|+++.+.||-.+... ...++.+++++-..++++.+
T Consensus 2 ~~li~~IPGNPGlv-~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV-EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChH-HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 46799999999998 88888876664 4599999999999777654 23468888887777777654
Q ss_pred -CCccEEEEEeccchHHHHHHHHhCC---cccceEEEecCCCCC
Q 024042 119 -GVERFSVVGTSYGGFVAYHMARMWP---ERVEKVVIASSGVNM 158 (273)
Q Consensus 119 -~~~~i~l~G~S~Gg~~a~~~a~~~~---~~v~~~v~~~~~~~~ 158 (273)
...+++++|||.|++++++++.+.+ .+|.+++++-|....
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 2367999999999999999999998 679999999987654
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.2e-12 Score=96.65 Aligned_cols=125 Identities=19% Similarity=0.131 Sum_probs=81.1
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchh--HhHHHH-HH-------hhcCCCeEEeecCCCCCCCCCCCcccc
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI--WQWRKQ-VQ-------FFAPHFNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~--~~~~~~-~~-------~l~~~~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
||++|....+.| .....++.|+||..++++.... ...... .. ...++|.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P-~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~- 78 (272)
T PF02129_consen 1 DGVRLAADVYRP-GADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM- 78 (272)
T ss_dssp TS-EEEEEEEEE---TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-
T ss_pred CCCEEEEEEEec-CCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-
Confidence 688888877764 2245677899999999885430 111111 11 33445999999999999999765442
Q ss_pred HHHHHHHHHHHHHHh---CC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC
Q 024042 104 ELFQAASLGKLLEKI---GV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR 160 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~---~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~ 160 (273)
.....+|..++++.+ .. .+|.++|.|++|..++.+|...|..+++++...+..+...
T Consensus 79 ~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 333344544444444 22 6899999999999999999988888999999888776654
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.9e-12 Score=90.75 Aligned_cols=179 Identities=17% Similarity=0.160 Sum_probs=98.7
Q ss_pred EeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHH--HHhhcCC--CeEEeecCCCCCCCC------CC---CccccHH
Q 024042 39 HFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQ--VQFFAPH--FNVYVPDLIFFGHST------TR---SIQRTEL 105 (273)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~--~~~l~~~--~~v~~~d~~g~g~s~------~~---~~~~~~~ 105 (273)
.|..+-|+.. ...+.|.||++||.+.+. ..+... ...+++. |.|+.++........ .. ....+..
T Consensus 2 ~Y~lYvP~~~-~~~~~PLVv~LHG~~~~a-~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~ 79 (220)
T PF10503_consen 2 SYRLYVPPGA-PRGPVPLVVVLHGCGQSA-EDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVA 79 (220)
T ss_pred cEEEecCCCC-CCCCCCEEEEeCCCCCCH-HHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchh
Confidence 4555543321 123578999999999988 555432 2345544 788888754211000 00 0011222
Q ss_pred HHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCC
Q 024042 106 FQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPES 183 (273)
Q Consensus 106 ~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
...+.+..+..+. +.+||++.|+|.||.++..++..+|+.+.++...++............... .........
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~-----m~~g~~~~p 154 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSA-----MRSGPRPAP 154 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHH-----hhCCCCCCh
Confidence 2223333344444 447999999999999999999999999999888876543322111110100 000000111
Q ss_pred hHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh
Q 024042 184 ASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL 237 (273)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~ 237 (273)
.......... ...+. .|++++||+.|..|.+...+.+.+++
T Consensus 155 ~~~~~a~~~~------g~~~~-------~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 155 AAAWGARSDA------GAYPG-------YPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred HHHHHhhhhc------cCCCC-------CCEEEEecCCCCccCcchHHHHHHHH
Confidence 1111100000 00111 28999999999999998888777766
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.9e-12 Score=95.78 Aligned_cols=211 Identities=16% Similarity=0.186 Sum_probs=76.3
Q ss_pred CCCeEEEEcCCCCch--hHhHHHHHHhhcCC-CeEEeecCC----CCCCCCCCCccccHHHHHHHHHHHHHHh-------
Q 024042 53 KKPSLVLIHGFGPEA--IWQWRKQVQFFAPH-FNVYVPDLI----FFGHSTTRSIQRTELFQAASLGKLLEKI------- 118 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~--~~~~~~~~~~l~~~-~~v~~~d~~----g~g~s~~~~~~~~~~~~~~~~~~~~~~~------- 118 (273)
....|||+.|.+... ......+++.|.+. |.++-+.++ |+|.+ +.+..+++|.++++.+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~-------SL~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS-------SLDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc-------hhhhHHHHHHHHHHHHHHhhccc
Confidence 566899999987644 13456788888765 999988766 44433 5555566665555543
Q ss_pred -CCccEEEEEeccchHHHHHHHHhCC-----cccceEEEecCCCCCCCcch--HH---Hhhhhhh-hhh-----hhccCC
Q 024042 119 -GVERFSVVGTSYGGFVAYHMARMWP-----ERVEKVVIASSGVNMKRGDN--EA---LVKRANL-ERI-----DHLMLP 181 (273)
Q Consensus 119 -~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~v~~~v~~~~~~~~~~~~~--~~---~~~~~~~-~~~-----~~~~~~ 181 (273)
+.++|+|+|||-|+.-++.++.... ..|+++|+-+|..+...... .. ....... ... ...+.+
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp 184 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILP 184 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG-
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceee
Confidence 3478999999999999999988752 56999999999876543221 00 1111000 000 000000
Q ss_pred ---------CChHHHHHHhhhhhccC---------CCCChhhHHhhhhccEEEEecCCCCCCChH-----HHHHHHHHhc
Q 024042 182 ---------ESASQLRTLTGLAVSKN---------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLK-----MATELKELLG 238 (273)
Q Consensus 182 ---------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~-----~~~~~~~~~~ 238 (273)
..+-...++........ .+..-...+..+..|+|++.+++|+.+|.. ..++|.+..+
T Consensus 185 ~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~ 264 (303)
T PF08538_consen 185 REFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATN 264 (303)
T ss_dssp ---GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT--------------------
T ss_pred ccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccccc
Confidence 11111111111110000 000111123344459999999999999864 2233333331
Q ss_pred C---CcEEEEeCCCCCCcCcCCh----hhHHHHHHHHhc
Q 024042 239 K---KARLEIIENTSHVPQIENP----GLFNSIVKNFLR 270 (273)
Q Consensus 239 ~---~~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl~ 270 (273)
+ ...--++||++|..--+.. +.+.+.+..||+
T Consensus 265 ~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 265 PKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ---------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccCC
Confidence 1 1224588999998654322 357777888874
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.8e-13 Score=96.53 Aligned_cols=205 Identities=20% Similarity=0.272 Sum_probs=119.6
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhc-CC---CeEEe--ecCCCC----CC--C--CCC-------Ccc-ccHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFA-PH---FNVYV--PDLIFF----GH--S--TTR-------SIQ-RTELFQA 108 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~-~~---~~v~~--~d~~g~----g~--s--~~~-------~~~-~~~~~~~ 108 (273)
.....|.||+||++++. ..+..++..+. +. -.++. ++.-|. |. . ..| ... .+....+
T Consensus 8 ~~~~tPTifihG~~gt~-~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa 86 (255)
T PF06028_consen 8 NQSTTPTIFIHGYGGTA-NSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQA 86 (255)
T ss_dssp --S-EEEEEE--TTGGC-CCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHH
T ss_pred ccCCCcEEEECCCCCCh-hHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHH
Confidence 34566899999999998 89999998886 32 33333 333331 21 1 111 011 2566778
Q ss_pred HHHHHHHHHh----CCccEEEEEeccchHHHHHHHHhCCc-----ccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc
Q 024042 109 ASLGKLLEKI----GVERFSVVGTSYGGFVAYHMARMWPE-----RVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM 179 (273)
Q Consensus 109 ~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~~-----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (273)
+++..++..+ +.+++.+|||||||..++.++..+.. ++..+|.+++++........... ...+...-
T Consensus 87 ~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~----~~~~~~~g 162 (255)
T PF06028_consen 87 KWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQN----QNDLNKNG 162 (255)
T ss_dssp HHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TT----TT-CSTT-
T ss_pred HHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccch----hhhhcccC
Confidence 8888877766 66899999999999999999887532 48999999988775432211000 00000000
Q ss_pred CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecC------CCCCCChHHHHHHHHHhcC---CcEEEEeC--C
Q 024042 180 LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGD------QDQIFPLKMATELKELLGK---KARLEIIE--N 248 (273)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~------~D~~~~~~~~~~~~~~~~~---~~~~~~~~--~ 248 (273)
.......++.+....... .|... .+|-|.|. .|..||...+..+...+.+ ..+-.++. +
T Consensus 163 p~~~~~~y~~l~~~~~~~----~p~~i------~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~ 232 (255)
T PF06028_consen 163 PKSMTPMYQDLLKNRRKN----FPKNI------QVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKD 232 (255)
T ss_dssp BSS--HHHHHHHHTHGGG----STTT-------EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGG
T ss_pred CcccCHHHHHHHHHHHhh----CCCCe------EEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCC
Confidence 112223333333321000 11111 68999998 7999999999888887732 23444554 4
Q ss_pred CCCCcCcCChhhHHHHHHHHhcc
Q 024042 249 TSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 249 ~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+.|.-..+++ ++.+.|.+||=+
T Consensus 233 a~HS~LheN~-~V~~~I~~FLw~ 254 (255)
T PF06028_consen 233 AQHSQLHENP-QVDKLIIQFLWG 254 (255)
T ss_dssp GSCCGGGCCH-HHHHHHHHHHCT
T ss_pred CccccCCCCH-HHHHHHHHHhcC
Confidence 6899877766 677999999843
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.1e-12 Score=98.68 Aligned_cols=131 Identities=19% Similarity=0.238 Sum_probs=95.1
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH------HHHhhcCC-CeEEeecCCCCCCCC
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK------QVQFFAPH-FNVYVPDLIFFGHST 96 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~------~~~~l~~~-~~v~~~d~~g~g~s~ 96 (273)
..+.+.++++||..+.....+ ...+++|+|++.||.-+++ ..|-. ++-.|+++ |+|+.-+.||-..|.
T Consensus 47 ~~E~h~V~T~DgYiL~lhRIp----~~~~~rp~Vll~HGLl~sS-~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr 121 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRIP----RGKKKRPVVLLQHGLLASS-SSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSR 121 (403)
T ss_pred ceEEEEEEccCCeEEEEeeec----CCCCCCCcEEEeecccccc-ccceecCccccHHHHHHHcCCceeeecCcCcccch
Confidence 468889999999977776664 2237889999999988877 66643 33456666 999999999966554
Q ss_pred CCC-------c---cccHHH-----HHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCc---ccceEEEecCCCCC
Q 024042 97 TRS-------I---QRTELF-----QAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE---RVEKVVIASSGVNM 158 (273)
Q Consensus 97 ~~~-------~---~~~~~~-----~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~---~v~~~v~~~~~~~~ 158 (273)
... . ..+..+ ..+.|..+++.-+.+++..+|||.|+.....++...|+ +|+.+++++|....
T Consensus 122 ~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 122 KHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred hhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 211 1 123333 33344445555577899999999999999888887765 69999999998744
Q ss_pred C
Q 024042 159 K 159 (273)
Q Consensus 159 ~ 159 (273)
.
T Consensus 202 k 202 (403)
T KOG2624|consen 202 K 202 (403)
T ss_pred c
Confidence 3
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-11 Score=105.28 Aligned_cols=193 Identities=17% Similarity=0.111 Sum_probs=114.4
Q ss_pred HhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC--------------------CccEEEEEeccchHH
Q 024042 76 QFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG--------------------VERFSVVGTSYGGFV 134 (273)
Q Consensus 76 ~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~i~l~G~S~Gg~~ 134 (273)
+.+.++ |.|+.+|.||.|.|.+...... ....+|..++++.+. ..+|.++|.|+||.+
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPTTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 455555 9999999999999987643322 223444444444442 369999999999999
Q ss_pred HHHHHHhCCcccceEEEecCCCCCCCcchH---------------HHhhhhhhhhhhhccCC----CChHHHHHHhh---
Q 024042 135 AYHMARMWPERVEKVVIASSGVNMKRGDNE---------------ALVKRANLERIDHLMLP----ESASQLRTLTG--- 192 (273)
Q Consensus 135 a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--- 192 (273)
++.+|...|..++++|..++.......... ....... ....... ...........
T Consensus 352 ~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~---~~r~~~~~~~~~~~~~~~~~~~~~~ 428 (767)
T PRK05371 352 PNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELT---YSRNLLAGDYLRHNEACEKLLAELT 428 (767)
T ss_pred HHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHh---hhcccCcchhhcchHHHHHHHhhhh
Confidence 999999888889999998776543210000 0000000 0000000 00011111000
Q ss_pred -hhhcc---C----CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCc-CChhh
Q 024042 193 -LAVSK---N----LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQI-ENPGL 260 (273)
Q Consensus 193 -~~~~~---~----~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~-~~~~~ 260 (273)
..... . ..........++..|+|+++|..|..++.+.+.++++.+ +.+.++.+.+ ++|.... ..+.+
T Consensus 429 ~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~~~~~~~d 507 (767)
T PRK05371 429 AAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYPNNWQSID 507 (767)
T ss_pred hhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCCCchhHHH
Confidence 00000 0 011222345567789999999999999988887777776 2356665555 7896433 34567
Q ss_pred HHHHHHHHhcccC
Q 024042 261 FNSIVKNFLRGSL 273 (273)
Q Consensus 261 ~~~~i~~fl~~~l 273 (273)
+.+.+.+|+++.|
T Consensus 508 ~~e~~~~Wfd~~L 520 (767)
T PRK05371 508 FRDTMNAWFTHKL 520 (767)
T ss_pred HHHHHHHHHHhcc
Confidence 7788888887654
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.5e-12 Score=88.15 Aligned_cols=195 Identities=12% Similarity=0.101 Sum_probs=117.8
Q ss_pred CCCCCeEEEEcCCC---CchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCC-CccccHHHHHHHHHHHHHHhC-CccEEE
Q 024042 51 TLKKPSLVLIHGFG---PEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTR-SIQRTELFQAASLGKLLEKIG-VERFSV 125 (273)
Q Consensus 51 ~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~-~~~~~~~~~~~~~~~~~~~~~-~~~i~l 125 (273)
....+..||+||.- ++.......+-..+..+|+|.++++- .+... ....++.+...-+.-+++... .+.+.+
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~---l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~ 140 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN---LCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTF 140 (270)
T ss_pred CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC---cCcccccHHHHHHHHHHHHHHHHHhcccceeEEE
Confidence 45678999999943 23323334444566666999998653 33221 112344444555555555553 366778
Q ss_pred EEeccchHHHHHHHHhC-CcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChh
Q 024042 126 VGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPD 204 (273)
Q Consensus 126 ~G~S~Gg~~a~~~a~~~-~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (273)
-|||.|+++|+.+..+. ..+|.++++.++.....+.......... ......... ....-
T Consensus 141 gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dl----------gLt~~~ae~----------~Scdl 200 (270)
T KOG4627|consen 141 GGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDL----------GLTERNAES----------VSCDL 200 (270)
T ss_pred cccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCcccccc----------Ccccchhhh----------cCccH
Confidence 89999999999887663 4579999999886654321110000000 000000000 11222
Q ss_pred hHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCC----hhhHHHHHHHHh
Q 024042 205 FFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIEN----PGLFNSIVKNFL 269 (273)
Q Consensus 205 ~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~----~~~~~~~i~~fl 269 (273)
+.+..+..|+|++.|+.|.---.++.+.+.+.+ ..+++..++|.+|+-..++ ...+...+..|+
T Consensus 201 ~~~~~v~~~ilVv~~~~espklieQnrdf~~q~-~~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 201 WEYTDVTVWILVVAAEHESPKLIEQNRDFADQL-RKASFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred HHhcCceeeeeEeeecccCcHHHHhhhhHHHHh-hhcceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 344555568999999999776678899999998 7799999999999854432 223444455544
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-11 Score=86.31 Aligned_cols=174 Identities=17% Similarity=0.176 Sum_probs=114.6
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCC-CCCCCCC-CCcc-------ccHHH---HHHHHHHHHHHhC-
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLI-FFGHSTT-RSIQ-------RTELF---QAASLGKLLEKIG- 119 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~-g~g~s~~-~~~~-------~~~~~---~~~~~~~~~~~~~- 119 (273)
+..||.+-.+.+.....-+..+..++.+ |.|++||+- |-..+.. .... .+... ....+.++++..+
T Consensus 39 ~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 39 KKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred CeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 3577777775554425577888888777 999999975 3111111 0000 01111 2233333444334
Q ss_pred CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCC
Q 024042 120 VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNL 199 (273)
Q Consensus 120 ~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (273)
.++|.++|.||||-++..+....+ .+.+++..-|....
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d----------------------------------------- 156 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD----------------------------------------- 156 (242)
T ss_pred cceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC-----------------------------------------
Confidence 588999999999999999888877 57777776553221
Q ss_pred CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC----cEEEEeCCCCCCcCc-----CCh------hhHHHH
Q 024042 200 DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK----ARLEIIENTSHVPQI-----ENP------GLFNSI 264 (273)
Q Consensus 200 ~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~-----~~~------~~~~~~ 264 (273)
........+|++++.|+.|..+|+.....+.+.++.+ .++.++++-+|.++. +.| ++..+.
T Consensus 157 ----~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~ 232 (242)
T KOG3043|consen 157 ----SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQR 232 (242)
T ss_pred ----hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHH
Confidence 1122334459999999999999999999998888322 458999999997653 333 456677
Q ss_pred HHHHhcccC
Q 024042 265 VKNFLRGSL 273 (273)
Q Consensus 265 i~~fl~~~l 273 (273)
+.+|+++.+
T Consensus 233 ~~~Wf~~y~ 241 (242)
T KOG3043|consen 233 FISWFKHYL 241 (242)
T ss_pred HHHHHHHhh
Confidence 778887653
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.8e-12 Score=89.51 Aligned_cols=107 Identities=18% Similarity=0.244 Sum_probs=77.4
Q ss_pred CCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccc---cHHHHHHHHHHHHHHh------
Q 024042 49 HKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQR---TELFQAASLGKLLEKI------ 118 (273)
Q Consensus 49 ~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~---~~~~~~~~~~~~~~~~------ 118 (273)
...+.-|+|+|+||+.-.. ..|..++..++.. |-|+++++-..-. +.... +....++++..-++++
T Consensus 41 ~~~G~yPVilF~HG~~l~n-s~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~ 116 (307)
T PF07224_consen 41 SEAGTYPVILFLHGFNLYN-SFYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQHVLPENVE 116 (307)
T ss_pred CcCCCccEEEEeechhhhh-HHHHHHHHHHhhcCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhhhCCCCcc
Confidence 3456789999999998887 8899999999988 9999999864211 11111 2233344444444443
Q ss_pred -CCccEEEEEeccchHHHHHHHHhCC--cccceEEEecCCCCCC
Q 024042 119 -GVERFSVVGTSYGGFVAYHMARMWP--ERVEKVVIASSGVNMK 159 (273)
Q Consensus 119 -~~~~i~l~G~S~Gg~~a~~~a~~~~--~~v~~~v~~~~~~~~~ 159 (273)
+..++.++|||.||-.|..+|..+. -.+.++|-++|.....
T Consensus 117 ~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 117 ANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred cccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 3478999999999999999998763 2488999998876554
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.8e-11 Score=95.13 Aligned_cols=128 Identities=16% Similarity=0.160 Sum_probs=87.6
Q ss_pred eEEecCC---cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHH------------------hhcCCCeEEe
Q 024042 28 QTIDIDD---ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQ------------------FFAPHFNVYV 86 (273)
Q Consensus 28 ~~~~~~~---g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~------------------~l~~~~~v~~ 86 (273)
-++.+.+ +..+.||.+.++. ...+.|+||+++|.++++ ..+..+.+ .+.+...++.
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~--~~~~~Pl~lwlnGGPG~s-s~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~ 126 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRN--GNPEAPVLLWMTGGPGCS-SMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIY 126 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCC--CCCCCCEEEEECCCCcHH-HHHhhhccCCCeEEeCCCCceeECCcccccccCeEE
Confidence 3566633 5678888886442 245679999999998887 54432221 1223478999
Q ss_pred ecCC-CCCCCCCCCcc--ccHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHHhC----------Cccc
Q 024042 87 PDLI-FFGHSTTRSIQ--RTELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMARMW----------PERV 146 (273)
Q Consensus 87 ~d~~-g~g~s~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~~~----------~~~v 146 (273)
+|.| |+|.|...... .+.++.++++.++++.+ ...+++|+|||+||..+..+|.+. .-.+
T Consensus 127 iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inL 206 (462)
T PTZ00472 127 VDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINL 206 (462)
T ss_pred EeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeee
Confidence 9976 88888654332 35567788887777743 347899999999999887777652 1247
Q ss_pred ceEEEecCCCCC
Q 024042 147 EKVVIASSGVNM 158 (273)
Q Consensus 147 ~~~v~~~~~~~~ 158 (273)
+++++-++..+.
T Consensus 207 kGi~IGNg~~dp 218 (462)
T PTZ00472 207 AGLAVGNGLTDP 218 (462)
T ss_pred EEEEEeccccCh
Confidence 899988887644
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.3e-11 Score=89.45 Aligned_cols=160 Identities=19% Similarity=0.194 Sum_probs=99.9
Q ss_pred CCcceEEeecCCccCCCCCCCC-CeEEEEcCCCCchhHhHHHHHHh-------hcCC-CeEEeecCCC-CCCCCCCCccc
Q 024042 33 DDETTLHFWGPKLEDDHKTLKK-PSLVLIHGFGPEAIWQWRKQVQF-------FAPH-FNVYVPDLIF-FGHSTTRSIQR 102 (273)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~~~-~~vi~~hG~~~~~~~~~~~~~~~-------l~~~-~~v~~~d~~g-~g~s~~~~~~~ 102 (273)
+.|.++-|..+-|++-.++++- |.|||+||.|..+......+... ..+. +-|+++.+-- +..++. ....
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~-~t~~ 247 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE-KTLL 247 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc-ccch
Confidence 4678899998887665566666 99999999887663434333321 1112 4455555321 111111 0111
Q ss_pred cHHHHHHHHH-HHHHHhC--CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc
Q 024042 103 TELFQAASLG-KLLEKIG--VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM 179 (273)
Q Consensus 103 ~~~~~~~~~~-~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (273)
-.....+.+. .+.++.+ -+||.++|.|+||.-++.++.++|+.+.+.+++++..+...
T Consensus 248 ~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~------------------- 308 (387)
T COG4099 248 YLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVY------------------- 308 (387)
T ss_pred hHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhh-------------------
Confidence 1222233333 2233333 37899999999999999999999999999999998554210
Q ss_pred CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh
Q 024042 180 LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL 237 (273)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~ 237 (273)
..+.. -..|+.++|+.+|+++|.+.++-+.+.+
T Consensus 309 ------lv~~l-------------------k~~piWvfhs~dDkv~Pv~nSrv~y~~l 341 (387)
T COG4099 309 ------LVRTL-------------------KKAPIWVFHSSDDKVIPVSNSRVLYERL 341 (387)
T ss_pred ------hhhhh-------------------ccCceEEEEecCCCccccCcceeehHHH
Confidence 00000 0118999999999999988776555554
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.7e-12 Score=90.96 Aligned_cols=161 Identities=19% Similarity=0.136 Sum_probs=85.7
Q ss_pred CCCeEEEEcCCCCchhHhHHH----HHHhhcC-CCeEEeecCCCC-----CCCCC----------C-------------C
Q 024042 53 KKPSLVLIHGFGPEAIWQWRK----QVQFFAP-HFNVYVPDLIFF-----GHSTT----------R-------------S 99 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~----~~~~l~~-~~~v~~~d~~g~-----g~s~~----------~-------------~ 99 (273)
.++.|+++||++.+. ..++. +...|.+ .+..+.+|-|-- |-... . .
T Consensus 3 ~k~riLcLHG~~~na-~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNA-EIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--H-HHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCH-HHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 577899999999999 66654 4456666 577777775521 11100 0 0
Q ss_pred ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC--------CcccceEEEecCCCCCCCcchHHHhhhhh
Q 024042 100 IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW--------PERVEKVVIASSGVNMKRGDNEALVKRAN 171 (273)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------~~~v~~~v~~~~~~~~~~~~~~~~~~~~~ 171 (273)
.....++..+.+.+.++..+. =..|+|+|.||.+|..++... ...++-+|++++.......
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~---------- 150 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD---------- 150 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-----------
T ss_pred cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh----------
Confidence 012344555566666666552 357999999999998888542 1247888888876553211
Q ss_pred hhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC-cEEEEeCCCC
Q 024042 172 LERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK-ARLEIIENTS 250 (273)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~g 250 (273)
.... . ....+..|+|.|+|++|.+++.+.++.+.+.+ .+ .+++..+ +|
T Consensus 151 -------------------~~~~-------~---~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~-~~~~~v~~h~-gG 199 (212)
T PF03959_consen 151 -------------------YQEL-------Y---DEPKISIPTLHVIGENDPVVPPERSEALAEMF-DPDARVIEHD-GG 199 (212)
T ss_dssp -------------------GTTT-------T-----TT---EEEEEEETT-SSS-HHHHHHHHHHH-HHHEEEEEES-SS
T ss_pred -------------------hhhh-------h---ccccCCCCeEEEEeCCCCCcchHHHHHHHHhc-cCCcEEEEEC-CC
Confidence 0000 0 12233449999999999999999999999999 55 7777776 79
Q ss_pred CCcCcC
Q 024042 251 HVPQIE 256 (273)
Q Consensus 251 H~~~~~ 256 (273)
|.+...
T Consensus 200 H~vP~~ 205 (212)
T PF03959_consen 200 HHVPRK 205 (212)
T ss_dssp SS----
T ss_pred CcCcCC
Confidence 987654
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.2e-10 Score=79.93 Aligned_cols=170 Identities=15% Similarity=0.190 Sum_probs=96.4
Q ss_pred EEEEcCCCCchhHh--HH-HHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh-C---CccEEEEEec
Q 024042 57 LVLIHGFGPEAIWQ--WR-KQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI-G---VERFSVVGTS 129 (273)
Q Consensus 57 vi~~hG~~~~~~~~--~~-~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-~---~~~i~l~G~S 129 (273)
||++||+.++. .. .. .....+..+.+++ +++ ........+.+.+.++.+ . .+++.|+|.|
T Consensus 2 IlYlHGF~SS~-~S~~~Ka~~l~~~~p~~~~~--~l~----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSS 68 (180)
T PRK04940 2 IIYLHGFDSTS-PGNHEKVLQLQFIDPDVRLI--SYS----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVG 68 (180)
T ss_pred EEEeCCCCCCC-CccHHHHHhheeeCCCCeEE--ECC----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeC
Confidence 79999999887 44 21 1112221223333 221 112333344444544432 1 1579999999
Q ss_pred cchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhh
Q 024042 130 YGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFND 209 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (273)
+||..|..++.++. + ..|+++|...+... +....+.. .....-...-+.++. .+
T Consensus 69 LGGyyA~~La~~~g--~-~aVLiNPAv~P~~~----L~~~ig~~---~~y~~~~~~h~~eL~----------------~~ 122 (180)
T PRK04940 69 LGGYWAERIGFLCG--I-RQVIFNPNLFPEEN----MEGKIDRP---EEYADIATKCVTNFR----------------EK 122 (180)
T ss_pred hHHHHHHHHHHHHC--C-CEEEECCCCChHHH----HHHHhCCC---cchhhhhHHHHHHhh----------------hc
Confidence 99999999999985 4 46788888776321 11111100 000000011111110 01
Q ss_pred hhccEEEEecCCCCCCChHHHHHHHHHhcCCc-EEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 210 FVHDVLIVWGDQDQIFPLKMATELKELLGKKA-RLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 210 ~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
-....+++..+.|++.+...+.... .++ +..+.+|++|.+ ++-++....|.+|++.
T Consensus 123 ~p~r~~vllq~gDEvLDyr~a~~~y----~~~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 123 NRDRCLVILSRNDEVLDSQRTAEEL----HPYYEIVWDEEQTHKF--KNISPHLQRIKAFKTL 179 (180)
T ss_pred CcccEEEEEeCCCcccCHHHHHHHh----ccCceEEEECCCCCCC--CCHHHHHHHHHHHHhc
Confidence 1114699999999999887665544 344 788889888974 4456778888898864
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.1e-12 Score=93.36 Aligned_cols=142 Identities=19% Similarity=0.213 Sum_probs=67.9
Q ss_pred HHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhh------cc
Q 024042 109 ASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDH------LM 179 (273)
Q Consensus 109 ~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 179 (273)
+...++++.. +.++|.|+|.|.||.+|+.+|..+| .|+++|.++|....................+.. ..
T Consensus 7 e~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~ 85 (213)
T PF08840_consen 7 EEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFSWN 85 (213)
T ss_dssp HHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-EE-
T ss_pred HHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhceec
Confidence 3344444443 2368999999999999999999998 699999999876544321000000000000000 00
Q ss_pred CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChH-HHHHHHHHh---c-C-CcEEEEeCCCCCCc
Q 024042 180 LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLK-MATELKELL---G-K-KARLEIIENTSHVP 253 (273)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~-~~~~~~~~~---~-~-~~~~~~~~~~gH~~ 253 (273)
.+.... ....... .............+++.+|+|+|.|++|..+|.. .++.+.+++ + + +.+.+.|+++||.+
T Consensus 86 ~~~~~~-~~~~~~~-~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 86 EPGLLR-SRYAFEL-ADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp TTS-EE--TT-B---TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred CCccee-hhhhhhc-ccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 000000 0000000 0000011122346677889999999999999865 444455544 1 2 57888999999974
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=8.6e-12 Score=92.31 Aligned_cols=187 Identities=14% Similarity=0.084 Sum_probs=119.0
Q ss_pred hhCCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc
Q 024042 21 ASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 21 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~ 100 (273)
++.+-....+...||-++.--...-.+...+..+..||++-|..+.. + ..-+..-+..+|.|+.++.||++.|.+.+.
T Consensus 210 e~~NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFY-E-vG~m~tP~~lgYsvLGwNhPGFagSTG~P~ 287 (517)
T KOG1553|consen 210 ENKNGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFY-E-VGVMNTPAQLGYSVLGWNHPGFAGSTGLPY 287 (517)
T ss_pred hcCCCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccce-E-eeeecChHHhCceeeccCCCCccccCCCCC
Confidence 33444566677668876643222111112234466888888866543 1 122233344569999999999999998776
Q ss_pred cccHHHHHHHHH-HHHHHhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhh
Q 024042 101 QRTELFQAASLG-KLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDH 177 (273)
Q Consensus 101 ~~~~~~~~~~~~-~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (273)
.......++.+. -.++.++. +.|++.|||.||..+..+|..+|+ |+++|+-+..-+....
T Consensus 288 p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDllpL---------------- 350 (517)
T KOG1553|consen 288 PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDLLPL---------------- 350 (517)
T ss_pred cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhhhhH----------------
Confidence 554444444443 34555654 789999999999999999999997 9999998765443211
Q ss_pred ccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCCh
Q 024042 178 LMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPL 227 (273)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~ 227 (273)
-....+..++................+.+.++..|+.+|.-.+|+++..
T Consensus 351 -Al~rMP~~~~giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIitt 399 (517)
T KOG1553|consen 351 -ALFRMPTFFSGIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIITT 399 (517)
T ss_pred -HhhhchHHHHHHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhhc
Confidence 1122233334444444444444456677778888999988888877654
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.4e-10 Score=84.93 Aligned_cols=100 Identities=19% Similarity=0.201 Sum_probs=85.7
Q ss_pred CeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC-ccEEEEEeccchH
Q 024042 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV-ERFSVVGTSYGGF 133 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~ 133 (273)
|+|+++|+.++.. ..|..+...+.....|+.++.||++.- .....+++++++...+.|..... .+++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~-~~~~~L~~~l~~~~~v~~l~a~g~~~~--~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSV-LAYAPLAAALGPLLPVYGLQAPGYGAG--EQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcH-HHHHHHHHHhccCceeeccccCccccc--ccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccH
Confidence 5899999999998 999999999998899999999998863 33446888888888888887755 7999999999999
Q ss_pred HHHHHHHhC---CcccceEEEecCCCC
Q 024042 134 VAYHMARMW---PERVEKVVIASSGVN 157 (273)
Q Consensus 134 ~a~~~a~~~---~~~v~~~v~~~~~~~ 157 (273)
+|..+|.+. .+.|..++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999764 346899999998777
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1e-10 Score=81.57 Aligned_cols=174 Identities=16% Similarity=0.170 Sum_probs=106.4
Q ss_pred CCCCeEEEEcCCCCchhHhHHH----HHHhhcCCCeEEeecCCC------CCCCCC-------C----------------
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRK----QVQFFAPHFNVYVPDLIF------FGHSTT-------R---------------- 98 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~----~~~~l~~~~~v~~~d~~g------~g~s~~-------~---------------- 98 (273)
..++.|+|+||+-.+. ..+.. +-..+.+.+..+.+|-|- .-.+.+ +
T Consensus 3 ~~k~rvLcLHGfrQsg-~~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 3 QKKLRVLCLHGFRQSG-KVFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCCceEEEecchhhcc-HHHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 3567899999998877 55543 223343346666666551 000000 0
Q ss_pred -CccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC--C----c--ccceEEEecCCCCCCCcchHHHhhh
Q 024042 99 -SIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW--P----E--RVEKVVIASSGVNMKRGDNEALVKR 169 (273)
Q Consensus 99 -~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~----~--~v~~~v~~~~~~~~~~~~~~~~~~~ 169 (273)
......+...+.+.+.++..|. =-.|+|+|.|+.++..++..- . . .++-+|++++.......
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGP-FDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~-------- 152 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGP-FDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK-------- 152 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCC-CccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch--------
Confidence 0011233345556666666553 127999999999999988721 1 1 25667777664432110
Q ss_pred hhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCC
Q 024042 170 ANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENT 249 (273)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (273)
.........+..|.|.|.|+.|.++|.+.++.|++.+ ++..++.-+ +
T Consensus 153 -------------------------------~~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~-~~a~vl~Hp-g 199 (230)
T KOG2551|consen 153 -------------------------------LDESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESF-KDATVLEHP-G 199 (230)
T ss_pred -------------------------------hhhhhhccCCCCCeeEEecccceeecchHHHHHHHhc-CCCeEEecC-C
Confidence 0011122234459999999999999999999999999 777666666 8
Q ss_pred CCCcCcCChhhHHHHHHHHhc
Q 024042 250 SHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 250 gH~~~~~~~~~~~~~i~~fl~ 270 (273)
||+....+ ...+.+.+|++
T Consensus 200 gH~VP~~~--~~~~~i~~fi~ 218 (230)
T KOG2551|consen 200 GHIVPNKA--KYKEKIADFIQ 218 (230)
T ss_pred CccCCCch--HHHHHHHHHHH
Confidence 99976544 44555555554
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.3e-11 Score=87.10 Aligned_cols=107 Identities=21% Similarity=0.211 Sum_probs=71.4
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhc--------C-CCeEEeecCCCCCCCCCCCc-cccHHHHHHHHHHHHHHh----
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFA--------P-HFNVYVPDLIFFGHSTTRSI-QRTELFQAASLGKLLEKI---- 118 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~--------~-~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~---- 118 (273)
.+.+|||+||.+++. ..++.+...+. . .++++++|+......-.... ....+...+.+..+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~-~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~ 81 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSY-KQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNR 81 (225)
T ss_pred CCCEEEEECcCCCCH-hHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhcc
Confidence 567999999999888 77777765441 1 27899999875432211111 112223334444555544
Q ss_pred -CCccEEEEEeccchHHHHHHHHhCC---cccceEEEecCCCCCCC
Q 024042 119 -GVERFSVVGTSYGGFVAYHMARMWP---ERVEKVVIASSGVNMKR 160 (273)
Q Consensus 119 -~~~~i~l~G~S~Gg~~a~~~a~~~~---~~v~~~v~~~~~~~~~~ 160 (273)
+.++++++||||||.+|..++...+ +.++.+|.++++.....
T Consensus 82 ~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 82 PPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred CCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 4588999999999999988876543 46999999988766544
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.3e-10 Score=79.70 Aligned_cols=219 Identities=12% Similarity=0.109 Sum_probs=130.0
Q ss_pred CCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC----CeEEeecCCCCCCCC---C------CCccccHHHHHHHHHHHHH
Q 024042 50 KTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH----FNVYVPDLIFFGHST---T------RSIQRTELFQAASLGKLLE 116 (273)
Q Consensus 50 ~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~----~~v~~~d~~g~g~s~---~------~~~~~~~~~~~~~~~~~~~ 116 (273)
....++.+++++|.+|.. ..|..++..|-+. ..++.+..-||-.-+ . ....++.+++++--.++++
T Consensus 25 ~~~~~~li~~IpGNPG~~-gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik 103 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLL-GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIK 103 (301)
T ss_pred CCCCceEEEEecCCCCch-hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHH
Confidence 356788999999999998 8888887766443 558888777765433 1 1123477778887788887
Q ss_pred HhCC--ccEEEEEeccchHHHHHHHHhCC--cccceEEEecCCCCCCCcch------------HHHhhhhhh------hh
Q 024042 117 KIGV--ERFSVVGTSYGGFVAYHMARMWP--ERVEKVVIASSGVNMKRGDN------------EALVKRANL------ER 174 (273)
Q Consensus 117 ~~~~--~~i~l~G~S~Gg~~a~~~a~~~~--~~v~~~v~~~~~~~~~~~~~------------~~~~~~~~~------~~ 174 (273)
..-. .+++++|||-|+++.+.+..... -.+.+++++-|....-...+ ......... +.
T Consensus 104 ~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~ 183 (301)
T KOG3975|consen 104 EYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPG 183 (301)
T ss_pred HhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChH
Confidence 7633 78999999999999999887432 24777777766432110000 000000000 00
Q ss_pred -----hhh--ccCCCChHHHH----HHhhhhhccCC-----------CCChhhHHhhhhccEEEEecCCCCCCChHHHHH
Q 024042 175 -----IDH--LMLPESASQLR----TLTGLAVSKNL-----------DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATE 232 (273)
Q Consensus 175 -----~~~--~~~~~~~~~~~----~~~~~~~~~~~-----------~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~ 232 (273)
+.. ...+..+..+. .+......++. ........++-..-+.+.+|..|..||.+....
T Consensus 184 ~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~~~~d~ 263 (301)
T KOG3975|consen 184 FIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPSHYYDY 263 (301)
T ss_pred HHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcchHHHHH
Confidence 000 00001111000 00000000000 001222333434478899999999999999999
Q ss_pred HHHHhcCCcEEEE-eCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 233 LKELLGKKARLEI-IENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 233 ~~~~~~~~~~~~~-~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
+.+.+ +..++.. .++..|.+...+.+..+..+.+.++
T Consensus 264 ~kdd~-~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~~ 301 (301)
T KOG3975|consen 264 YKDDV-PEEDLKLDEDKIPHAFVVKHAQYMANAVFDMIQ 301 (301)
T ss_pred Hhhhc-chhceeeccccCCcceeecccHHHHHHHHHhhC
Confidence 99999 5444332 2678999988888888888877653
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.1e-12 Score=95.19 Aligned_cols=119 Identities=18% Similarity=0.215 Sum_probs=64.3
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH------------------HHHHHhhcCC-CeEEeecCCCC
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW------------------RKQVQFFAPH-FNVYVPDLIFF 92 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~------------------~~~~~~l~~~-~~v~~~d~~g~ 92 (273)
+.++..+..+..-|+. ..++.|.||++||-++.. +.. ..+...|+++ |.|+++|.+|+
T Consensus 95 ~~p~~~vpaylLvPd~--~~~p~PAVL~lHgHg~~K-e~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~ 171 (390)
T PF12715_consen 95 TTPGSRVPAYLLVPDG--AKGPFPAVLCLHGHGGGK-EKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGF 171 (390)
T ss_dssp -STTB-EEEEEEEETT----S-EEEEEEE--TT--H-HHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTS
T ss_pred ccCCeeEEEEEEecCC--CCCCCCEEEEeCCCCCCc-ccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccc
Confidence 3355555544443221 146678999999977655 221 1235567777 99999999999
Q ss_pred CCCCCCCcc-----ccHHHHHH---------------HHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCccc
Q 024042 93 GHSTTRSIQ-----RTELFQAA---------------SLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERV 146 (273)
Q Consensus 93 g~s~~~~~~-----~~~~~~~~---------------~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v 146 (273)
|+....... ++....+. +....++.+ +.++|.++|+||||..++.+++.. ++|
T Consensus 172 GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRI 250 (390)
T PF12715_consen 172 GERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRI 250 (390)
T ss_dssp GGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT-
T ss_pred cccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhh
Confidence 987654321 11111111 112233333 347899999999999999999986 579
Q ss_pred ceEEEecC
Q 024042 147 EKVVIASS 154 (273)
Q Consensus 147 ~~~v~~~~ 154 (273)
++.|..+.
T Consensus 251 ka~v~~~~ 258 (390)
T PF12715_consen 251 KATVANGY 258 (390)
T ss_dssp -EEEEES-
T ss_pred HhHhhhhh
Confidence 88887654
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.6e-11 Score=94.89 Aligned_cols=156 Identities=17% Similarity=0.209 Sum_probs=82.5
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCC-C-C--CC-------------c-----------cc
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHS-T-T--RS-------------I-----------QR 102 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s-~-~--~~-------------~-----------~~ 102 (273)
++-|+|||-||.+++. ..|..++..|+.+ |.|+++|.|..-.. . . .. . ..
T Consensus 98 ~~~PvvIFSHGlgg~R-~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSR-TSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--T-TTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcch-hhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 5689999999999999 9999999999888 99999999942111 0 0 00 0 00
Q ss_pred -------cHHHHHHHHHHHHHHh--------------------------CCccEEEEEeccchHHHHHHHHhCCcccceE
Q 024042 103 -------TELFQAASLGKLLEKI--------------------------GVERFSVVGTSYGGFVAYHMARMWPERVEKV 149 (273)
Q Consensus 103 -------~~~~~~~~~~~~~~~~--------------------------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~ 149 (273)
.++..++++..+++.+ +.+++.++|||+||..++.++.+. .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 1111223333333222 235799999999999999988876 679999
Q ss_pred EEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHH
Q 024042 150 VIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKM 229 (273)
Q Consensus 150 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~ 229 (273)
|+++++...... .....+..|+|+|+++. +.....
T Consensus 256 I~LD~W~~Pl~~-------------------------------------------~~~~~i~~P~L~InSe~--f~~~~~ 290 (379)
T PF03403_consen 256 ILLDPWMFPLGD-------------------------------------------EIYSKIPQPLLFINSES--FQWWEN 290 (379)
T ss_dssp EEES---TTS-G-------------------------------------------GGGGG--S-EEEEEETT--T--HHH
T ss_pred EEeCCcccCCCc-------------------------------------------ccccCCCCCEEEEECcc--cCChhh
Confidence 999987542110 00122344999998875 222333
Q ss_pred HHHHHHHh--cCCcEEEEeCCCCCCcC
Q 024042 230 ATELKELL--GKKARLEIIENTSHVPQ 254 (273)
Q Consensus 230 ~~~~~~~~--~~~~~~~~~~~~gH~~~ 254 (273)
...+.+.. ..+..++.+.|+.|..+
T Consensus 291 ~~~~~~~~~~~~~~~~~ti~gt~H~s~ 317 (379)
T PF03403_consen 291 IFRMKKVISNNKESRMLTIKGTAHLSF 317 (379)
T ss_dssp HHHHHTT--TTS-EEEEEETT--GGGG
T ss_pred HHHHHHHhccCCCcEEEEECCCcCCCc
Confidence 33333322 25678889999999654
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=8.9e-11 Score=89.73 Aligned_cols=107 Identities=11% Similarity=0.180 Sum_probs=75.7
Q ss_pred CCCeEEEEcCCCCchhHhH-----HHHHHhhcCC-CeEEeecCCCCCCCCCCC--ccccHHHHHHHHHHHHHHhCCccEE
Q 024042 53 KKPSLVLIHGFGPEAIWQW-----RKQVQFFAPH-FNVYVPDLIFFGHSTTRS--IQRTELFQAASLGKLLEKIGVERFS 124 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~g~g~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~ 124 (273)
-+++++++|.+-... ..+ ..++..|.++ +.|+.+++++=..+.... .+|-.+...+.+..+.+..+.++|.
T Consensus 106 ~~~PlLiVpP~iNk~-yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~In 184 (445)
T COG3243 106 LKRPLLIVPPWINKF-YILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDIN 184 (445)
T ss_pred CCCceEeeccccCce-eEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 467899999875444 333 3455555555 999999998654443321 1222234445566666666889999
Q ss_pred EEEeccchHHHHHHHHhCCcc-cceEEEecCCCCCCC
Q 024042 125 VVGTSYGGFVAYHMARMWPER-VEKVVIASSGVNMKR 160 (273)
Q Consensus 125 l~G~S~Gg~~a~~~a~~~~~~-v~~~v~~~~~~~~~~ 160 (273)
++|+|.||.++..+++.++.+ |+.++++.+..++..
T Consensus 185 liGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~ 221 (445)
T COG3243 185 LIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSH 221 (445)
T ss_pred eeeEecchHHHHHHHHhhhhcccccceeeecchhhcc
Confidence 999999999999999888877 999999988777654
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1e-10 Score=81.06 Aligned_cols=174 Identities=14% Similarity=0.247 Sum_probs=111.4
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCC------------------CCCccccHHHHHHHHHHH
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHST------------------TRSIQRTELFQAASLGKL 114 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~------------------~~~~~~~~~~~~~~~~~~ 114 (273)
..+||++||.+.+. ..|..++..+.-. ..-+++.-|-.-.+. ...........++.+..+
T Consensus 3 ~atIi~LHglGDsg-~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSG-SGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCC-ccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 35899999999998 8888887776554 566666443211110 001112344445556666
Q ss_pred HHHh-----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHH
Q 024042 115 LEKI-----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRT 189 (273)
Q Consensus 115 ~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (273)
+++. ..++|.+-|.|+||.+|+..+..++..+.+++...+........ +.......
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~------------~~~~~~~~------- 142 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG------------LPGWLPGV------- 142 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh------------ccCCcccc-------
Confidence 6554 23689999999999999999999987788877766644421110 00000000
Q ss_pred HhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhhHHHHHH
Q 024042 190 LTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGLFNSIVK 266 (273)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 266 (273)
. ..|++..||+.|++||....+...+.+ +..++++.+++-+|... ++++ +.+.
T Consensus 143 ------------~--------~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~---~~e~-~~~~ 198 (206)
T KOG2112|consen 143 ------------N--------YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTS---PQEL-DDLK 198 (206)
T ss_pred ------------C--------cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccccc---HHHH-HHHH
Confidence 0 228999999999999987665555444 35589999999999754 4444 4455
Q ss_pred HHhcc
Q 024042 267 NFLRG 271 (273)
Q Consensus 267 ~fl~~ 271 (273)
.|+++
T Consensus 199 ~~~~~ 203 (206)
T KOG2112|consen 199 SWIKT 203 (206)
T ss_pred HHHHH
Confidence 66653
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.8e-11 Score=80.81 Aligned_cols=178 Identities=16% Similarity=0.118 Sum_probs=111.1
Q ss_pred CeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH----hCCccEEEEEec
Q 024042 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK----IGVERFSVVGTS 129 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~G~S 129 (273)
..+||+.|=|+-. ..-..++..|+++ +.|+.+|-+-|-.+. .+.++.+.|+..+++. .+.++++|+|+|
T Consensus 3 t~~v~~SGDgGw~-~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~-----rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 3 TLAVFFSGDGGWR-DLDKQIAEALAKQGVPVVGVDSLRYFWSE-----RTPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEEeCCCCch-hhhHHHHHHHHHCCCeEEEechHHHHhhh-----CCHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 3678888876666 5667788899888 999999977554443 3445556666555554 477899999999
Q ss_pred cchHHHHHHHHhCCc----ccceEEEecCCCCCCCcc-hHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChh
Q 024042 130 YGGFVAYHMARMWPE----RVEKVVIASSGVNMKRGD-NEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPD 204 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (273)
+|+-+.-....+.|. +|..++++++.....-.. ...+.... .... .....
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~---------~~~~----------------~~~~~ 131 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWLGMG---------GDDA----------------AYPVI 131 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhcCCC---------CCcc----------------cCCch
Confidence 999888887777663 689999998865432110 01110000 0000 00111
Q ss_pred hHHhhhhc-cEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 205 FFFNDFVH-DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 205 ~~~~~~~~-p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
...+++.. |+++|+|++|.-..-. .+. .++.+.+.+| +||.+ -++.+.+++.|.+-+++
T Consensus 132 pei~~l~~~~v~CiyG~~E~d~~cp---~l~---~~~~~~i~lp-GgHHf-d~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 132 PEIAKLPPAPVQCIYGEDEDDSLCP---SLR---QPGVEVIALP-GGHHF-DGDYDALAKRILDALKA 191 (192)
T ss_pred HHHHhCCCCeEEEEEcCCCCCCcCc---ccc---CCCcEEEEcC-CCcCC-CCCHHHHHHHHHHHHhc
Confidence 11222222 8999999887542111 111 2688999999 56655 34567788888777664
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-09 Score=79.53 Aligned_cols=129 Identities=22% Similarity=0.210 Sum_probs=86.5
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHH--HhhcCC--CeEEeecC-C------CC
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQV--QFFAPH--FNVYVPDL-I------FF 92 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~--~~l~~~--~~v~~~d~-~------g~ 92 (273)
..+..++.. +|.+..|+.+.|+. .+.+.|.||.+||.+++. ..++... +.|++. |-|+.+|- + +.
T Consensus 34 ~~~~~s~~~-~g~~r~y~l~vP~g--~~~~apLvv~LHG~~~sg-ag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~ 109 (312)
T COG3509 34 GSSVASFDV-NGLKRSYRLYVPPG--LPSGAPLVVVLHGSGGSG-AGQLHGTGWDALADREGFLVAYPDGYDRAWNANGC 109 (312)
T ss_pred cCCcccccc-CCCccceEEEcCCC--CCCCCCEEEEEecCCCCh-HHhhcccchhhhhcccCcEEECcCccccccCCCcc
Confidence 445667777 78888888876432 234458999999998888 5555443 445444 88998852 2 12
Q ss_pred CCCCCCCc----cccHHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCC
Q 024042 93 GHSTTRSI----QRTELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV 156 (273)
Q Consensus 93 g~s~~~~~----~~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~ 156 (273)
+.+..+.. ..+.....+.+..++.+.++ .+|++.|.|.||.++..++..+|+.+.++.++++..
T Consensus 110 ~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 110 GNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 22222221 12333344444455555555 589999999999999999999999999998888765
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.4e-09 Score=79.21 Aligned_cols=197 Identities=12% Similarity=0.046 Sum_probs=111.2
Q ss_pred EEcCCC--CchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH-hCCccEEEEEeccchHHH
Q 024042 59 LIHGFG--PEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK-IGVERFSVVGTSYGGFVA 135 (273)
Q Consensus 59 ~~hG~~--~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a 135 (273)
++|..+ ++. ..|..+...+...+.++.++.+|++.+.... .+.+..++.+...+.. ....+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~-~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGP-HEYARLAAALRGRRDVSALPLPGFGPGEPLP--ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcH-HHHHHHHHhcCCCccEEEecCCCCCCCCCCC--CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHH
Confidence 445533 455 7899999999888999999999998665332 3555555555444433 345789999999999999
Q ss_pred HHHHHhC---CcccceEEEecCCCCCCCcchHHHhhhhhh--hhhhh---ccCCCChHHHHHHhhhhhccCCCCChhhHH
Q 024042 136 YHMARMW---PERVEKVVIASSGVNMKRGDNEALVKRANL--ERIDH---LMLPESASQLRTLTGLAVSKNLDIVPDFFF 207 (273)
Q Consensus 136 ~~~a~~~---~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (273)
..++.+. +..+.+++++++......... ........ ..... ..........+....... . ...
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~ 149 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYPPGDPAPE-GWLPELLRGVFEREDSFVPMDDARLTAMGAYLRLFG----G----WTP 149 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCCCCCccch-hhHHHHHHHHHhhhcccccccchhhhHHHHHHHHhc----c----CCC
Confidence 8888763 456888988876443222110 00000000 00000 000000000111110000 0 001
Q ss_pred hhhhccEEEEecCCCCCC-ChHHHHHHHHHhcCCcEEEEeCCCCCCcC-cCChhhHHHHHHHH
Q 024042 208 NDFVHDVLIVWGDQDQIF-PLKMATELKELLGKKARLEIIENTSHVPQ-IENPGLFNSIVKNF 268 (273)
Q Consensus 208 ~~~~~p~l~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~f 268 (273)
..+..|+.++.+++|... +......|.+......+.+.++ ++|+.+ .+++..+.+.+..|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~-g~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 150 GPVAAPTLLVRASEPLAEWPDEDPDGWRAHWPLPHTVVDVP-GDHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred CCCCCCEEEEeccCCCCCCCCCCcccccCCCCCCceeEEcc-CchHHHHHHhHHHHHHHHHhh
Confidence 223448999999988654 2233334444444567888888 789876 44556666666655
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.5e-09 Score=82.03 Aligned_cols=107 Identities=19% Similarity=0.198 Sum_probs=72.4
Q ss_pred CCCCeEEEEcCCCCch---hHhH---HHHHHhhcCCCeEEeecCCCCCCC-CCCCccccHHHHHHHHHHHHHHhCCccEE
Q 024042 52 LKKPSLVLIHGFGPEA---IWQW---RKQVQFFAPHFNVYVPDLIFFGHS-TTRSIQRTELFQAASLGKLLEKIGVERFS 124 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~---~~~~---~~~~~~l~~~~~v~~~d~~g~g~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 124 (273)
+..|+||++||+|-.- .... ..+...|. ...++++|+.-.... ....-+....+.++....+++..+.++|+
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 3569999999976322 0222 22334444 568999998754300 11122346666677777777677889999
Q ss_pred EEEeccchHHHHHHHHhCC-----cccceEEEecCCCCCC
Q 024042 125 VVGTSYGGFVAYHMARMWP-----ERVEKVVIASSGVNMK 159 (273)
Q Consensus 125 l~G~S~Gg~~a~~~a~~~~-----~~v~~~v~~~~~~~~~ 159 (273)
|+|-|.||.+++.+.+... ...+++|+++|+....
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999988876421 1368999999998876
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.2e-09 Score=84.43 Aligned_cols=127 Identities=15% Similarity=0.208 Sum_probs=84.1
Q ss_pred EEecC--CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHH-------------------hhcCCCeEEee
Q 024042 29 TIDID--DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQ-------------------FFAPHFNVYVP 87 (273)
Q Consensus 29 ~~~~~--~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~-------------------~l~~~~~v~~~ 87 (273)
++.+. .+..+.||.+.++. ...+.|+||++.|.++++ ..+..+.+ .+.+..+++.+
T Consensus 15 yl~~~~~~~~~lfyw~~~s~~--~~~~~Pl~~wlnGGPG~S-S~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~i 91 (415)
T PF00450_consen 15 YLPVNDNENAHLFYWFFESRN--DPEDDPLILWLNGGPGCS-SMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFI 91 (415)
T ss_dssp EEEECTTTTEEEEEEEEE-SS--GGCSS-EEEEEE-TTTB--THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE
T ss_pred EEecCCCCCcEEEEEEEEeCC--CCCCccEEEEecCCceec-cccccccccCceEEeecccccccccccccccccceEEE
Confidence 55554 67789999886443 346779999999998888 66544322 12233689999
Q ss_pred cCC-CCCCCCCCCccc---cHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHHh----C------Cccc
Q 024042 88 DLI-FFGHSTTRSIQR---TELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMARM----W------PERV 146 (273)
Q Consensus 88 d~~-g~g~s~~~~~~~---~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~~----~------~~~v 146 (273)
|.| |.|.|....... +.++.++++..+++.+ ...+++|.|.|+||..+-.+|.. . +-.+
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 966 899987665543 6777788887777764 33689999999999876666543 2 2348
Q ss_pred ceEEEecCCCCC
Q 024042 147 EKVVIASSGVNM 158 (273)
Q Consensus 147 ~~~v~~~~~~~~ 158 (273)
+++++.++..+.
T Consensus 172 kGi~IGng~~dp 183 (415)
T PF00450_consen 172 KGIAIGNGWIDP 183 (415)
T ss_dssp EEEEEESE-SBH
T ss_pred ccceecCccccc
Confidence 899999987765
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.4e-09 Score=78.28 Aligned_cols=42 Identities=21% Similarity=0.258 Sum_probs=36.9
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHh---c-CCcEEEEeCCCCCCcC
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELL---G-KKARLEIIENTSHVPQ 254 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~gH~~~ 254 (273)
|+++.+|..|.++|....+.+.+.+ + .+++++.++..+|...
T Consensus 221 Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 221 PVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 9999999999999999988888876 5 5788999999999753
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.2e-09 Score=80.19 Aligned_cols=163 Identities=17% Similarity=0.169 Sum_probs=103.3
Q ss_pred CCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCC---------CCc-------------c----
Q 024042 49 HKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTT---------RSI-------------Q---- 101 (273)
Q Consensus 49 ~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~---------~~~-------------~---- 101 (273)
+.+++-|+|||-||.+++. ..|..+.-.|+.. |.|.+++.|.+-.+.. +.. .
T Consensus 113 tk~~k~PvvvFSHGLggsR-t~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ 191 (399)
T KOG3847|consen 113 TKNDKYPVVVFSHGLGGSR-TLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFH 191 (399)
T ss_pred CCCCCccEEEEecccccch-hhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEE
Confidence 3467789999999999999 9999999889888 9999999986543220 000 0
Q ss_pred ---ccHHHHHHHHH---HHHHHh------------------------CCccEEEEEeccchHHHHHHHHhCCcccceEEE
Q 024042 102 ---RTELFQAASLG---KLLEKI------------------------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVI 151 (273)
Q Consensus 102 ---~~~~~~~~~~~---~~~~~~------------------------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~ 151 (273)
......++.+. .+++.+ +..++.++|||+||..+......+. +++..|+
T Consensus 192 irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~ 270 (399)
T KOG3847|consen 192 IRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIA 270 (399)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeee
Confidence 01111222222 222222 1246889999999999988887765 4888888
Q ss_pred ecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHH
Q 024042 152 ASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMAT 231 (273)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~ 231 (273)
.+++..+. ......+...|+++|..+ | +--.+...
T Consensus 271 lD~WM~Pl-------------------------------------------~~~~~~~arqP~~finv~-~-fQ~~en~~ 305 (399)
T KOG3847|consen 271 LDAWMFPL-------------------------------------------DQLQYSQARQPTLFINVE-D-FQWNENLL 305 (399)
T ss_pred eeeeeccc-------------------------------------------chhhhhhccCCeEEEEcc-c-ccchhHHH
Confidence 87765432 122233444499999844 2 22345555
Q ss_pred HHHHHhc--CCcEEEEeCCCCCCcCcCCh
Q 024042 232 ELKELLG--KKARLEIIENTSHVPQIENP 258 (273)
Q Consensus 232 ~~~~~~~--~~~~~~~~~~~gH~~~~~~~ 258 (273)
.+.+... ....++++.|+=|-.+.+-|
T Consensus 306 vmKki~~~n~g~~~it~~GsVHqnfsDfp 334 (399)
T KOG3847|consen 306 VMKKIESQNEGNHVITLDGSVHQNFSDFP 334 (399)
T ss_pred HHHhhhCCCccceEEEEccceecccccCc
Confidence 5655553 34567778888886554433
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.4e-10 Score=88.96 Aligned_cols=109 Identities=17% Similarity=0.274 Sum_probs=65.1
Q ss_pred CCCCCeEEEEcCCCCch-hHhHH-HHHH-hhcC--C-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh------
Q 024042 51 TLKKPSLVLIHGFGPEA-IWQWR-KQVQ-FFAP--H-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI------ 118 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~-~~~~~-~~~~-~l~~--~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~------ 118 (273)
+.++|++|++|||.++. ...|. .+.. .+.. + +.|+++|+...-...............+.+..+++.+
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 45789999999998776 34443 3333 4555 4 9999999963221110000012222333333333332
Q ss_pred CCccEEEEEeccchHHHHHHHHhCCc--ccceEEEecCCCCCC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWPE--RVEKVVIASSGVNMK 159 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~~--~v~~~v~~~~~~~~~ 159 (273)
..++++|||||+||++|-.++..... ++..+..++|+.+..
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 44899999999999999999998877 899999999977653
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.4e-09 Score=85.38 Aligned_cols=237 Identities=16% Similarity=0.082 Sum_probs=139.8
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHH-HHhhcCCCeEEeecCCCCCCCCCCCcc-
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQ-VQFFAPHFNVYVPDLIFFGHSTTRSIQ- 101 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~-~~~l~~~~~v~~~d~~g~g~s~~~~~~- 101 (273)
.++...+..||.+|.|.... +..+.+ +.|++|+--|...-+ ...|... ...|.++...+..+.||=|+=.+.-..
T Consensus 394 veQ~~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~A 471 (648)
T COG1505 394 VEQFFATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQA 471 (648)
T ss_pred EEEEEEEcCCCccccEEEEe-cCCcCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHH
Confidence 35556666799999999885 332334 788888877743222 1223332 456666788888899986653321110
Q ss_pred ---ccHHHHHHHHHHHHHHh---C---CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh
Q 024042 102 ---RTELFQAASLGKLLEKI---G---VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL 172 (273)
Q Consensus 102 ---~~~~~~~~~~~~~~~~~---~---~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (273)
..-....+|..++.+.+ + .+++.+.|-|-||.+...+..++|+.+.++|+--|..++..... -..+.
T Consensus 472 a~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~----l~aG~ 547 (648)
T COG1505 472 GMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHL----LTAGS 547 (648)
T ss_pred HhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcc----cccch
Confidence 11122234444444443 3 36799999999999999999999999999998877666542210 01112
Q ss_pred hhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCC
Q 024042 173 ERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENT 249 (273)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 249 (273)
......-.|..+.....+....-+.+... .+...|+||-.+.+|..|.+.++++++.++ +..+-+.+=.++
T Consensus 548 sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~------g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~g 621 (648)
T COG1505 548 SWIAEYGNPDDPEDRAFLLAYSPYHNLKP------GQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKG 621 (648)
T ss_pred hhHhhcCCCCCHHHHHHHHhcCchhcCCc------cccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCC
Confidence 23333345555655554333222221110 011228999999999999999999998888 223333344568
Q ss_pred CCCcCcCChh--hHHHHHHHHhcccC
Q 024042 250 SHVPQIENPG--LFNSIVKNFLRGSL 273 (273)
Q Consensus 250 gH~~~~~~~~--~~~~~i~~fl~~~l 273 (273)
||..--...+ .-...+..||.+.|
T Consensus 622 GH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 622 GHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred cccCCCChHHHHHHHHHHHHHHHHhh
Confidence 9986543332 22333456666543
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=2e-08 Score=71.64 Aligned_cols=200 Identities=21% Similarity=0.241 Sum_probs=114.4
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCCC------eEEeecCCCC----CCCC----CC-------CccccHHHHHHHHH
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHF------NVYVPDLIFF----GHST----TR-------SIQRTELFQAASLG 112 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~~------~v~~~d~~g~----g~s~----~~-------~~~~~~~~~~~~~~ 112 (273)
.-+.||+||++++. .....++.+|.+.+ -++.+|--|. |.=+ .| ....+..++..++.
T Consensus 45 ~iPTIfIhGsgG~a-sS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 45 AIPTIFIHGSGGTA-SSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred ccceEEEecCCCCh-hHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 45789999999999 88888888776654 3556665551 1100 01 01134555667776
Q ss_pred HHHHHh----CCccEEEEEeccchHHHHHHHHhCCc-----ccceEEEecCCCCCCC-cchHHHhhhhhhhhhhhccCCC
Q 024042 113 KLLEKI----GVERFSVVGTSYGGFVAYHMARMWPE-----RVEKVVIASSGVNMKR-GDNEALVKRANLERIDHLMLPE 182 (273)
Q Consensus 113 ~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~~-----~v~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 182 (273)
.++..+ +..++.++||||||.-...++..+.. .++.+|.+++++.... .......... ..-.+.
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~------~~~~~~ 197 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVL------KDGPGL 197 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheee------ccCccc
Confidence 666554 67899999999999999999887632 3899999988776111 1011110000 000000
Q ss_pred ChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCC------CCCChHHHHHHHHHhcCC-cEEE--Ee--CCCCC
Q 024042 183 SASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQD------QIFPLKMATELKELLGKK-ARLE--II--ENTSH 251 (273)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D------~~~~~~~~~~~~~~~~~~-~~~~--~~--~~~gH 251 (273)
.......++...+... .+. ..+|.|.|+-| ..||...+...+..+..+ ..++ ++ +++.|
T Consensus 198 ~~t~y~~y~~~n~k~v---~~~-------~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~H 267 (288)
T COG4814 198 IKTPYYDYIAKNYKKV---SPN-------TEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARH 267 (288)
T ss_pred cCcHHHHHHHhcceeC---CCC-------cEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchh
Confidence 1111111111111100 111 15899999865 455666666666666333 2222 23 45789
Q ss_pred CcCcCChhhHHHHHHHHhcc
Q 024042 252 VPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 252 ~~~~~~~~~~~~~i~~fl~~ 271 (273)
.-+.|+| .+.+.+..||-+
T Consensus 268 s~lhen~-~v~~yv~~FLw~ 286 (288)
T COG4814 268 SKLHENP-TVAKYVKNFLWE 286 (288)
T ss_pred hccCCCh-hHHHHHHHHhhc
Confidence 8888877 466778888854
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.3e-08 Score=77.44 Aligned_cols=172 Identities=17% Similarity=0.157 Sum_probs=92.6
Q ss_pred CCCCCeEEEEcCCCCchh-HhHHHHHHhhcCC----CeEEeecCCCCC-CCC-CCCccccHHHHHHHHHHHHHHh-----
Q 024042 51 TLKKPSLVLIHGFGPEAI-WQWRKQVQFFAPH----FNVYVPDLIFFG-HST-TRSIQRTELFQAASLGKLLEKI----- 118 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~-~~~~~~~~~l~~~----~~v~~~d~~g~g-~s~-~~~~~~~~~~~~~~~~~~~~~~----- 118 (273)
..+.|+|+++||...... .....+-..+.++ ..++.+|..+.. .+. ......-.....+++.-.+++.
T Consensus 206 ~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~ 285 (411)
T PRK10439 206 PEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSD 285 (411)
T ss_pred CCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCC
Confidence 346789999999432110 1222222223333 345677653211 111 0111112233445555555543
Q ss_pred CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKN 198 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (273)
+.++.+|+|+||||..|+.++.++|+.+.+++.+++..-..... ......+....... .
T Consensus 286 d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~------------------~~~~~~l~~~l~~~---~ 344 (411)
T PRK10439 286 DADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRG------------------GQQEGVLLEQLKAG---E 344 (411)
T ss_pred CccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCcc------------------CCchhHHHHHHHhc---c
Confidence 33678999999999999999999999999999999864322100 00000011111100 0
Q ss_pred CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCc
Q 024042 199 LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVP 253 (273)
Q Consensus 199 ~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~ 253 (273)
. .. ....+.+-.|+.|... .+..+.+.+.+ +.+.++.+++ +||..
T Consensus 345 ~--~~------~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~-GGHd~ 392 (411)
T PRK10439 345 V--SA------RGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVD-GGHDA 392 (411)
T ss_pred c--CC------CCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECC-CCcCH
Confidence 0 00 0014677788888544 34556666665 4568888998 48963
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.9e-08 Score=73.17 Aligned_cols=109 Identities=17% Similarity=0.079 Sum_probs=71.6
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH------HHHHHhhcC--CCeEEeecCCCCCCCCC
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW------RKQVQFFAP--HFNVYVPDLIFFGHSTT 97 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~------~~~~~~l~~--~~~v~~~d~~g~g~s~~ 97 (273)
.+..++. |+..+....... +...+...|+++-|.++.. +.. ......+++ +-+|+++++||.|.|.+
T Consensus 113 kRv~Iq~-D~~~IDt~~I~~---~~a~~~RWiL~s~GNg~~~-E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G 187 (365)
T PF05677_consen 113 KRVPIQY-DGVKIDTMAIHQ---PEAKPQRWILVSNGNGECY-ENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTG 187 (365)
T ss_pred eeEEEee-CCEEEEEEEeeC---CCCCCCcEEEEEcCChHHh-hhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCC
Confidence 3445555 888876554431 1245677999999987665 331 112222322 38999999999999988
Q ss_pred CCccccHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHHhC
Q 024042 98 RSIQRTELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.... ++++.+-.+.++.+ +.++|++.|||+||.++..++.++
T Consensus 188 ~~s~---~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 188 PPSR---KDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCCH---HHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 7753 44444444444333 237899999999999999877665
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=99.04 E-value=6.9e-08 Score=76.19 Aligned_cols=105 Identities=17% Similarity=0.195 Sum_probs=71.5
Q ss_pred CCCCCCCeEEEEc-------CCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh---
Q 024042 49 HKTLKKPSLVLIH-------GFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI--- 118 (273)
Q Consensus 49 ~~~~~~~~vi~~h-------G~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~--- 118 (273)
..+..++++|.+- |+|+.+ . -..+.-.|..++.|+.+.+. ..+.+..++.+.......+++.+
T Consensus 63 ~~d~~krP~vViDPRAGHGpGIGGFK-~-dSevG~AL~~GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~ 135 (581)
T PF11339_consen 63 PVDPTKRPFVVIDPRAGHGPGIGGFK-P-DSEVGVALRAGHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAER 135 (581)
T ss_pred CCCCCCCCeEEeCCCCCCCCCccCCC-c-ccHHHHHHHcCCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHh
Confidence 3344455555542 344443 1 23456677777888777664 22344567777776666666654
Q ss_pred --CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC
Q 024042 119 --GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR 160 (273)
Q Consensus 119 --~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~ 160 (273)
+..+++|+|-|.||..++.+|+.+|+.+.-+|+.+++.....
T Consensus 136 hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 136 HPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSYWA 179 (581)
T ss_pred CCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccccc
Confidence 224899999999999999999999999999998887765543
|
Their function is unknown. |
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.3e-08 Score=81.24 Aligned_cols=159 Identities=20% Similarity=0.263 Sum_probs=107.6
Q ss_pred CCCeEEEEcCCC-----CchhHhHHHHHHhhcCCCeEEeecCCC-CCCCCCCCccccHHHHHHHHHHHHH--------Hh
Q 024042 53 KKPSLVLIHGFG-----PEAIWQWRKQVQFFAPHFNVYVPDLIF-FGHSTTRSIQRTELFQAASLGKLLE--------KI 118 (273)
Q Consensus 53 ~~~~vi~~hG~~-----~~~~~~~~~~~~~l~~~~~v~~~d~~g-~g~s~~~~~~~~~~~~~~~~~~~~~--------~~ 118 (273)
..|.+|++||.+ .+....|........+...+..+|++. .|. ..+...++.+..+.+ ++
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-------~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-------ANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-------cchHHHHHHHHHHhhhhhhhhhccC
Confidence 467899999976 111233444444444447788888873 221 344444444444443 22
Q ss_pred CCccEEEEEeccchHHHHHHHHhCC-cccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhcc
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWP-ERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSK 197 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~-~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (273)
...+|+|+|+|||+.++.+...... ..|+++|.++-+.......
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp----------------------------------- 292 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP----------------------------------- 292 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcc-----------------------------------
Confidence 4478999999999888877776543 2488888887655433211
Q ss_pred CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc
Q 024042 198 NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255 (273)
Q Consensus 198 ~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 255 (273)
....++.+-++..|+|++.|..|..+++...+++.++.....+++++.+++|.+-.
T Consensus 293 --rgirDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 293 --RGIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred --cCCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 01334445566669999999999999999999999998677899999999997643
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.01 E-value=6.8e-10 Score=84.02 Aligned_cols=204 Identities=18% Similarity=0.164 Sum_probs=105.9
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCC--CCCCCCCcc---c---cHHHHHHHHHHHHH------
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFF--GHSTTRSIQ---R---TELFQAASLGKLLE------ 116 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~--g~s~~~~~~---~---~~~~~~~~~~~~~~------ 116 (273)
...|.|++-||.|+.. ..+..+++.+++. |.|..++.+|. |........ + ...+...++..+++
T Consensus 69 ~~~PlvvlshG~Gs~~-~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~ 147 (365)
T COG4188 69 YLLPLVVLSHGSGSYV-TGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLT 147 (365)
T ss_pred CcCCeEEecCCCCCCc-cchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhh
Confidence 3679999999999998 9999999999888 99999999983 332211111 1 11122223222222
Q ss_pred -------HhCCccEEEEEeccchHHHHHHHHhCCcccceEE------EecCCCCCCCcchHHHhhhhhhhhhhhccCCCC
Q 024042 117 -------KIGVERFSVVGTSYGGFVAYHMARMWPERVEKVV------IASSGVNMKRGDNEALVKRANLERIDHLMLPES 183 (273)
Q Consensus 117 -------~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
+++..+|.++|||+||+.++.++....+-..... .++....... .......... .....-....
T Consensus 148 ~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~--~~~l~q~~av-~~~~~~~~~r 224 (365)
T COG4188 148 ASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLN--GRLLNQCAAV-WLPRQAYDLR 224 (365)
T ss_pred cCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcC--hhhhcccccc-ccchhhhccc
Confidence 2244789999999999999998865433110000 0111111000 0000000000 0000000000
Q ss_pred hHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChH-HHHHHHHHh-cCCcEEEEeCCCCCCcCcCChhh
Q 024042 184 ASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLK-MATELKELL-GKKARLEIIENTSHVPQIENPGL 260 (273)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~-~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~ 260 (273)
...++..+...-... ......-..++..|++++.|..|.+.|.. ........+ +...-+..++++.|+.+.+-.++
T Consensus 225 DpriravvA~~p~~~-~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 225 DPRIRAVVAINPALG-MIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred cccceeeeeccCCcc-cccccccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 000000000000000 01112234455559999999999987764 333444445 23346788999999988775554
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.7e-10 Score=79.71 Aligned_cols=87 Identities=22% Similarity=0.291 Sum_probs=51.5
Q ss_pred CeEEEEcCCCCchhHhHHHHHHhhcCC-Ce---EEeecCCCCCCCCCCCccc----cHHHHHHHHHHHHHHhCCccEEEE
Q 024042 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FN---VYVPDLIFFGHSTTRSIQR----TELFQAASLGKLLEKIGVERFSVV 126 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~---v~~~d~~g~g~s~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~l~ 126 (273)
.||||+||.+++....|..+.+.|.++ |. ++++++-............ ...+..+.+.++++.-+. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 479999999885548899999998877 87 7999984332211111111 122344445555555688 99999
Q ss_pred EeccchHHHHHHHHhC
Q 024042 127 GTSYGGFVAYHMARMW 142 (273)
Q Consensus 127 G~S~Gg~~a~~~a~~~ 142 (273)
||||||.++-.+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999998887643
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.8e-09 Score=82.60 Aligned_cols=91 Identities=12% Similarity=0.124 Sum_probs=68.5
Q ss_pred HhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcc--ccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcc-
Q 024042 69 WQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ--RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPER- 145 (273)
Q Consensus 69 ~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~- 145 (273)
..|..+++.|.+...+...|++|+|.+.+.... ...+...+.+.++.+..+.++++|+||||||.++..++..+|+.
T Consensus 108 ~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~ 187 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVF 187 (440)
T ss_pred HHHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhH
Confidence 789999999988844558999999998765421 22334444455555555678999999999999999999888753
Q ss_pred ---cceEEEecCCCCCC
Q 024042 146 ---VEKVVIASSGVNMK 159 (273)
Q Consensus 146 ---v~~~v~~~~~~~~~ 159 (273)
|+++|.++++....
T Consensus 188 ~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 188 EKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HhHhccEEEECCCCCCC
Confidence 78899998765543
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.4e-08 Score=65.35 Aligned_cols=183 Identities=16% Similarity=0.175 Sum_probs=99.6
Q ss_pred EEEEcCCCCchhHhHHHHH--HhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHH
Q 024042 57 LVLIHGFGPEAIWQWRKQV--QFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFV 134 (273)
Q Consensus 57 vi~~hG~~~~~~~~~~~~~--~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~ 134 (273)
||++||+.++. ....... +.+.+...-+.+--| ....+....++.+..++...+.+.+.|+|.|+||+.
T Consensus 2 ilYlHGFnSSP-~shka~l~~q~~~~~~~~i~y~~p--------~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSP-GSHKAVLLLQFIDEDVRDIEYSTP--------HLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCc-ccHHHHHHHHHHhccccceeeecC--------CCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 89999998877 5544332 344433333222221 223467778888999999988778999999999999
Q ss_pred HHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccE
Q 024042 135 AYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDV 214 (273)
Q Consensus 135 a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 214 (273)
|..++.++. +++ |+++|...+.......+-+..+.-.-... ...+..+.......+... ..| ..
T Consensus 73 At~l~~~~G--ira-v~~NPav~P~e~l~gylg~~en~ytg~~y--~le~~hI~~l~~~~~~~l--~~p---------~~ 136 (191)
T COG3150 73 ATWLGFLCG--IRA-VVFNPAVRPYELLTGYLGRPENPYTGQEY--VLESRHIATLCVLQFREL--NRP---------RC 136 (191)
T ss_pred HHHHHHHhC--Chh-hhcCCCcCchhhhhhhcCCCCCCCCcceE--EeehhhHHHHHHhhcccc--CCC---------cE
Confidence 999999874 554 45566655432211111110000000000 000111111111111110 011 34
Q ss_pred EEEecCC-CCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 215 LIVWGDQ-DQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 215 l~i~g~~-D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
+++.... |++.....+... + ..+...+++++.|.+ .+-+...+.|..|+.
T Consensus 137 ~~lL~qtgDEvLDyr~a~a~---y-~~~~~~V~dgg~H~F--~~f~~~l~~i~aF~g 187 (191)
T COG3150 137 LVLLSQTGDEVLDYRQAVAY---Y-HPCYEIVWDGGDHKF--KGFSRHLQRIKAFKG 187 (191)
T ss_pred EEeecccccHHHHHHHHHHH---h-hhhhheeecCCCccc--cchHHhHHHHHHHhc
Confidence 5555555 988765544443 3 556677888899974 233445566777754
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.89 E-value=2e-07 Score=69.32 Aligned_cols=211 Identities=17% Similarity=0.139 Sum_probs=110.6
Q ss_pred eEEEEcCCCCchhHhHHHHHHhhc-CCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCc---cEEEEEeccc
Q 024042 56 SLVLIHGFGPEAIWQWRKQVQFFA-PHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVE---RFSVVGTSYG 131 (273)
Q Consensus 56 ~vi~~hG~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~l~G~S~G 131 (273)
++|++=||.+..........+... .++.++.+-.+-.....+. ......++.+.+.+...... ++.+-.+|.|
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnG 77 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS---KRLAPAADKLLELLSDSQSASPPPILFHSFSNG 77 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec---cchHHHHHHHHHHhhhhccCCCCCEEEEEEECc
Confidence 356666877665344433333332 4588888775521111111 24444455555555554332 7999999998
Q ss_pred hHHHHHHHHh----C------CcccceEEEecCCCCCCCcc-hHHHhhhhhhhhhhhc--cCCCChHHHHHHhhhhhccC
Q 024042 132 GFVAYHMARM----W------PERVEKVVIASSGVNMKRGD-NEALVKRANLERIDHL--MLPESASQLRTLTGLAVSKN 198 (273)
Q Consensus 132 g~~a~~~a~~----~------~~~v~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 198 (273)
|......... . -.+++++|+-+++....... ...+............ ........+...........
T Consensus 78 G~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (240)
T PF05705_consen 78 GSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSIISYFIFG 157 (240)
T ss_pred hHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8766554331 1 12389999887765543311 1111110000000000 00000000000000000000
Q ss_pred CCC--------ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCc-CChhhHHHHHH
Q 024042 199 LDI--------VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQI-ENPGLFNSIVK 266 (273)
Q Consensus 199 ~~~--------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~ 266 (273)
... ...........|-++++++.|.+++.+.+++..+.. +-+++...++++.|..+. ++|++..+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~ 237 (240)
T PF05705_consen 158 YPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVD 237 (240)
T ss_pred CCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHH
Confidence 000 000011122248999999999999999888877766 345788889999998665 68999999999
Q ss_pred HHh
Q 024042 267 NFL 269 (273)
Q Consensus 267 ~fl 269 (273)
+|+
T Consensus 238 ~fw 240 (240)
T PF05705_consen 238 EFW 240 (240)
T ss_pred hhC
Confidence 885
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.9e-08 Score=72.23 Aligned_cols=86 Identities=13% Similarity=0.108 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcC---CCeEEeecCCCCCCCCCCCccccHHH----HHHHHHHHHHHhCC--ccE
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAP---HFNVYVPDLIFFGHSTTRSIQRTELF----QAASLGKLLEKIGV--ERF 123 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~---~~~v~~~d~~g~g~s~~~~~~~~~~~----~~~~~~~~~~~~~~--~~i 123 (273)
+.-.|||+||+.++. ..|..+...+.. .+.-..+...++.... .....+++. .++.+.+.++.... .++
T Consensus 3 ~~hLvV~vHGL~G~~-~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~-~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNP-ADMRYLKNHLEKIPEDLPNARIVVLGYSNNE-FKTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCH-HHHHHHHHHHHHhhhhcchhhhhhhcccccc-cccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 445899999999998 888777666554 2211122222221111 111123333 34444444444443 489
Q ss_pred EEEEeccchHHHHHHHH
Q 024042 124 SVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~ 140 (273)
.++|||+||.++-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999876655
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.7e-08 Score=72.28 Aligned_cols=108 Identities=19% Similarity=0.251 Sum_probs=68.8
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHH---HhhcCCCeEEeecCCCCCCCCCCC-ccccHHHHHHHHHHHHHHh----CCcc
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQV---QFFAPHFNVYVPDLIFFGHSTTRS-IQRTELFQAASLGKLLEKI----GVER 122 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~---~~l~~~~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~~~~~~----~~~~ 122 (273)
.+++..+||+||+..+........+ ..+.-...++.+.||+.|.-..-. ...+.......+..+++.+ +.++
T Consensus 15 ~~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 3567899999999887633333332 333323589999999877532111 1112333344455555544 5689
Q ss_pred EEEEEeccchHHHHHHHHhC----C-----cccceEEEecCCCCC
Q 024042 123 FSVVGTSYGGFVAYHMARMW----P-----ERVEKVVIASSGVNM 158 (273)
Q Consensus 123 i~l~G~S~Gg~~a~~~a~~~----~-----~~v~~~v~~~~~~~~ 158 (273)
|++++||||+.+.+.+.... + .++..+++++|-.+.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 99999999999998876542 1 257888888875543
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.85 E-value=9.6e-08 Score=76.98 Aligned_cols=221 Identities=13% Similarity=0.054 Sum_probs=120.7
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHHHhh-cCCCeEEeecCCCCCCCC---CCC-
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQFF-APHFNVYVPDLIFFGHST---TRS- 99 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~~~l-~~~~~v~~~d~~g~g~s~---~~~- 99 (273)
++..+...||..+.....--+....++++|.+++.+|.-+-. ...|+.--..| ..++.....|.||=|+-. ...
T Consensus 442 ~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G 521 (712)
T KOG2237|consen 442 ERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDG 521 (712)
T ss_pred EEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhcc
Confidence 455666779987654333222223456788888888844322 22343322223 333777778999855432 111
Q ss_pred ----ccccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhh
Q 024042 100 ----IQRTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE 173 (273)
Q Consensus 100 ----~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
...+++++...+..+++.- ..++..+.|.|.||.++..+...+|+.++++|+-.|..+........+.... ..
T Consensus 522 ~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt-~s 600 (712)
T KOG2237|consen 522 RLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLT-TS 600 (712)
T ss_pred chhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccc-hh
Confidence 1235666665555555532 3478999999999999999999999999999998887765432111111110 11
Q ss_pred hhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh----c------CCcEE
Q 024042 174 RIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL----G------KKARL 243 (273)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~----~------~~~~~ 243 (273)
.+.. ...+.....+.....+.+.+...... ....+|+..+.+|..|.+..+.++.+++ . ++.-+
T Consensus 601 d~ee---~g~p~~~~~~~~i~~y~pv~~i~~q~---~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll 674 (712)
T KOG2237|consen 601 DYEE---WGNPEDFEDLIKISPYSPVDNIKKQV---QYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLL 674 (712)
T ss_pred hhcc---cCChhhhhhhheecccCccCCCchhc---cCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEE
Confidence 1111 12222222222222122111111111 1225788889997766655444444443 1 23445
Q ss_pred EEeCCCCCCc
Q 024042 244 EIIENTSHVP 253 (273)
Q Consensus 244 ~~~~~~gH~~ 253 (273)
.+-.++||+.
T Consensus 675 ~i~~~agH~~ 684 (712)
T KOG2237|consen 675 RIETKAGHGA 684 (712)
T ss_pred EEecCCcccc
Confidence 6678899985
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.6e-07 Score=67.54 Aligned_cols=212 Identities=15% Similarity=0.178 Sum_probs=112.7
Q ss_pred CCeEEEEcCCCCchhHhHHH--HH-HhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHH--------HHHHH------
Q 024042 54 KPSLVLIHGFGPEAIWQWRK--QV-QFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASL--------GKLLE------ 116 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~--~~-~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~--------~~~~~------ 116 (273)
.+.-|++-|-|.+. ..+. +. +.+.++...++++-|-||+..++..-...-+.+.|+ .+...
T Consensus 113 ~~KOG~~a~tgdh~--y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~ 190 (371)
T KOG1551|consen 113 ADLCLSWALTGDHV--YTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSS 190 (371)
T ss_pred CCeeEEEeecCCce--eEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccc
Confidence 34555555554443 2222 22 334444888999999999887554322222222222 12111
Q ss_pred HhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccC-CCChHHHHHHhh---
Q 024042 117 KIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML-PESASQLRTLTG--- 192 (273)
Q Consensus 117 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--- 192 (273)
..+..+..++|-||||.+|.++...++..|.-+-+.++.......... +.... ......... +......++...
T Consensus 191 ~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg-~l~~~-~s~~~~~~~~t~~~~~~~r~p~Q~~ 268 (371)
T KOG1551|consen 191 ADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEG-LLLQD-TSKMKRFNQTTNKSGYTSRNPAQSY 268 (371)
T ss_pred ccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhh-hhhhh-hHHHHhhccCcchhhhhhhCchhhH
Confidence 225689999999999999999999887666655555443322211111 11110 000000000 000000000000
Q ss_pred ----hhhccCCCCChhhH----H------hhhhc-----cEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCC-
Q 024042 193 ----LAVSKNLDIVPDFF----F------NDFVH-----DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHV- 252 (273)
Q Consensus 193 ----~~~~~~~~~~~~~~----~------~~~~~-----p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~- 252 (273)
....++.+.....+ . ..+.. -++++.+++|..+|...+..+.+.+ |++++..++ +||.
T Consensus 269 ~~~~~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~W-Pg~eVr~~e-gGHVs 346 (371)
T KOG1551|consen 269 HLLSKEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIW-PGCEVRYLE-GGHVS 346 (371)
T ss_pred HHHHHHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhC-CCCEEEEee-cCcee
Confidence 00000000000000 0 00111 3577889999999999999999999 999999998 8996
Q ss_pred cCcCChhhHHHHHHHHhcc
Q 024042 253 PQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 253 ~~~~~~~~~~~~i~~fl~~ 271 (273)
..+-+.+.+...|.+-|++
T Consensus 347 ayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 347 AYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred eeehhchHHHHHHHHHHHh
Confidence 4455677888888877754
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.78 E-value=5e-06 Score=63.81 Aligned_cols=203 Identities=10% Similarity=0.075 Sum_probs=114.8
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHhHHHHHHhhcCC-CeEEeecCCC--CCCCCC---
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQWRKQVQFFAPH-FNVYVPDLIF--FGHSTT--- 97 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~~~~~~~~l~~~-~~v~~~d~~g--~g~s~~--- 97 (273)
+...++..+..-+..+... ........||++||.+.+. ......+-..|.+. +.++++..|. ......
T Consensus 63 e~~~L~~~~~~flaL~~~~----~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~ 138 (310)
T PF12048_consen 63 EVQWLQAGEERFLALWRPA----NSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRAT 138 (310)
T ss_pred hcEEeecCCEEEEEEEecc----cCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCC
Confidence 3445555344444555443 3345566999999998775 13345556677776 9999998886 110000
Q ss_pred -------------CCc--c---------ccH----HHH---HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCc-c
Q 024042 98 -------------RSI--Q---------RTE----LFQ---AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE-R 145 (273)
Q Consensus 98 -------------~~~--~---------~~~----~~~---~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~-~ 145 (273)
... . ... ... .+.+.++.+..+..+++|+||+.|+..+..+....+. .
T Consensus 139 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~ 218 (310)
T PF12048_consen 139 EAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPM 218 (310)
T ss_pred CCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcc
Confidence 000 0 001 111 2223333334465679999999999999999988754 4
Q ss_pred cceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCC
Q 024042 146 VEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIF 225 (273)
Q Consensus 146 v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~ 225 (273)
++++|++++........ . .-...+.++..|+|=|++.+...
T Consensus 219 ~daLV~I~a~~p~~~~n----------------------~----------------~l~~~la~l~iPvLDi~~~~~~~- 259 (310)
T PF12048_consen 219 PDALVLINAYWPQPDRN----------------------P----------------ALAEQLAQLKIPVLDIYSADNPA- 259 (310)
T ss_pred cCeEEEEeCCCCcchhh----------------------h----------------hHHHHhhccCCCEEEEecCCChH-
Confidence 89999999865432210 0 00112233344999999887322
Q ss_pred ChHHHHH---HHHHh-cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 226 PLKMATE---LKELL-GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 226 ~~~~~~~---~~~~~-~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
....+.. +.++. ..+.+.+.+.+..|.... ..+.+.+.|..||+++
T Consensus 260 ~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~-~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 260 SQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSG-WQEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHHHHHHHHHhccCCCceeEecCCCCCChhh-HHHHHHHHHHHHHHhh
Confidence 2221111 11111 244566667766665422 2334889999999865
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.71 E-value=4e-07 Score=63.34 Aligned_cols=198 Identities=17% Similarity=0.178 Sum_probs=107.2
Q ss_pred ceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHH--HHHHhh-cCC-CeEEeecCCCCCCCCCCC------------
Q 024042 36 TTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWR--KQVQFF-APH-FNVYVPDLIFFGHSTTRS------------ 99 (273)
Q Consensus 36 ~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~--~~~~~l-~~~-~~v~~~d~~g~g~s~~~~------------ 99 (273)
..+.+-.+-|+..+.+.+-|++.++.|...+. +.+- .-.+.. ++. +.|+.+|-.=.|-.-...
T Consensus 26 c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~-~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGF 104 (283)
T KOG3101|consen 26 CSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTH-ENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGF 104 (283)
T ss_pred cceEEEEecCCCcccCCcCceEEEecCCcccc-hhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCcee
Confidence 34444444444444455679999999998877 4332 122222 233 788888864322211000
Q ss_pred ----------cccc-HHHHHHHHHHHHHH----hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH
Q 024042 100 ----------IQRT-ELFQAASLGKLLEK----IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE 164 (273)
Q Consensus 100 ----------~~~~-~~~~~~~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~ 164 (273)
..+. .+..++.+.+++.. ++..++.++||||||+=|+-.+.+.|.+.+++...+|..++..-.+.
T Consensus 105 YvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWG 184 (283)
T KOG3101|consen 105 YVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWG 184 (283)
T ss_pred EEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcch
Confidence 0011 12234444454442 23467999999999999999999999998888887776654432211
Q ss_pred HHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhh---ccEEEEecCCCCCCChH-HHHHHHHHhc--
Q 024042 165 ALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV---HDVLIVWGDQDQIFPLK-MATELKELLG-- 238 (273)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p~l~i~g~~D~~~~~~-~~~~~~~~~~-- 238 (273)
. ..+.. ........+..+- +..+++.+. ..+||=.|+.|.+...+ .-+.+.++..
T Consensus 185 q-------KAf~g-YLG~~ka~W~~yD-----------at~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~ 245 (283)
T KOG3101|consen 185 Q-------KAFTG-YLGDNKAQWEAYD-----------ATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKAT 245 (283)
T ss_pred H-------HHhhc-ccCCChHHHhhcc-----------hHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhcc
Confidence 1 01111 1222333222221 112222221 15788899999987633 2233444431
Q ss_pred --CCcEEEEeCCCCCCc
Q 024042 239 --KKARLEIIENTSHVP 253 (273)
Q Consensus 239 --~~~~~~~~~~~gH~~ 253 (273)
....+...++-+|..
T Consensus 246 ~~~~v~~r~~~gyDHSY 262 (283)
T KOG3101|consen 246 WQAPVVFRLQEGYDHSY 262 (283)
T ss_pred ccccEEEEeecCCCcce
Confidence 235566778888953
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.6e-05 Score=63.84 Aligned_cols=129 Identities=16% Similarity=0.176 Sum_probs=78.0
Q ss_pred eeEEecC--CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHH---HH-------------hh-------cCC
Q 024042 27 SQTIDID--DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQ---VQ-------------FF-------APH 81 (273)
Q Consensus 27 ~~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~---~~-------------~l-------~~~ 81 (273)
.-++++. .+..+.||...++. .....|+|+++-|.++++ ..+..+ .+ .+ .+.
T Consensus 39 sGy~~v~~~~~~~lfy~f~es~~--~~~~~P~~lWlnGGPG~S-S~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~ 115 (433)
T PLN03016 39 TGYIGIGEDENVQFFYYFIKSEN--NPKEDPLLIWLNGGPGCS-CLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM 115 (433)
T ss_pred EEEEEecCCCCeEEEEEEEecCC--CcccCCEEEEEcCCCcHH-HHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc
Confidence 3355553 35678888876432 245679999999998877 432211 11 11 123
Q ss_pred CeEEeecCC-CCCCCCCCCcc-c-cHHHHHHHHHHHHHH----h---CCccEEEEEeccchHHHHHHHHh----C-----
Q 024042 82 FNVYVPDLI-FFGHSTTRSIQ-R-TELFQAASLGKLLEK----I---GVERFSVVGTSYGGFVAYHMARM----W----- 142 (273)
Q Consensus 82 ~~v~~~d~~-g~g~s~~~~~~-~-~~~~~~~~~~~~~~~----~---~~~~i~l~G~S~Gg~~a~~~a~~----~----- 142 (273)
.+++.+|.| |.|.|...... . +..+.++++..+++. . ...+++|.|.|+||..+-.+|.. .
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 689999965 88888643321 1 111223444444443 2 33789999999999866665543 1
Q ss_pred -CcccceEEEecCCCCC
Q 024042 143 -PERVEKVVIASSGVNM 158 (273)
Q Consensus 143 -~~~v~~~v~~~~~~~~ 158 (273)
+-.++|+++-+|....
T Consensus 196 ~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 196 PPINLQGYMLGNPVTYM 212 (433)
T ss_pred CcccceeeEecCCCcCc
Confidence 1247899998886544
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.65 E-value=8.4e-07 Score=62.30 Aligned_cols=104 Identities=14% Similarity=0.109 Sum_probs=73.7
Q ss_pred CCCeEEEEcCCCCch--hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC----ccEEE
Q 024042 53 KKPSLVLIHGFGPEA--IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV----ERFSV 125 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~--~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~l 125 (273)
.+..|||+-|.+..- ......+...|.+. |..+-+.++.+-. .-...+.++.++++..++++++. ..|+|
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~---G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYN---GYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccc---ccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 346789999987654 12335666777776 9998888762211 11223667778899999998744 48999
Q ss_pred EEeccchHHHHHHHHh--CCcccceEEEecCCCCCC
Q 024042 126 VGTSYGGFVAYHMARM--WPERVEKVVIASSGVNMK 159 (273)
Q Consensus 126 ~G~S~Gg~~a~~~a~~--~~~~v~~~v~~~~~~~~~ 159 (273)
+|||-|+.-.+.+... .+..+.+.|+-+|..+..
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 9999999988888733 356688889888877643
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.65 E-value=1e-07 Score=71.50 Aligned_cols=54 Identities=24% Similarity=0.341 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHh-CC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC
Q 024042 106 FQAASLGKLLEKI-GV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK 159 (273)
Q Consensus 106 ~~~~~~~~~~~~~-~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~ 159 (273)
...+++...++.. .. ++..++|+||||..|+.++.++|+.+.+++.++|.....
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc
Confidence 3455666666554 32 237999999999999999999999999999999876544
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.2e-05 Score=64.52 Aligned_cols=127 Identities=16% Similarity=0.212 Sum_probs=78.3
Q ss_pred EEecC--CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHH----------------hh-------cCCCe
Q 024042 29 TIDID--DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQ----------------FF-------APHFN 83 (273)
Q Consensus 29 ~~~~~--~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~----------------~l-------~~~~~ 83 (273)
++++. .+..+.||...++. .....|+|+++-|.++++ ..+..+.+ .+ .+..+
T Consensus 43 y~~v~~~~~~~lf~~f~es~~--~~~~~Pl~lWlnGGPG~S-S~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 119 (437)
T PLN02209 43 YIGIGEEENVQFFYYFIKSDK--NPQEDPLIIWLNGGPGCS-CLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTAN 119 (437)
T ss_pred EEEecCCCCeEEEEEEEecCC--CCCCCCEEEEECCCCcHH-HhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCc
Confidence 55553 35678888775432 244679999999998877 44432211 11 12267
Q ss_pred EEeecCC-CCCCCCCCCc--cccHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHHh----C------C
Q 024042 84 VYVPDLI-FFGHSTTRSI--QRTELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMARM----W------P 143 (273)
Q Consensus 84 v~~~d~~-g~g~s~~~~~--~~~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~~----~------~ 143 (273)
++.+|.| |.|.|..... ..+.++.++++..+++.. ..++++|.|.|+||..+-.+|.. . +
T Consensus 120 llfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 120 IIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 8999965 8888753322 122223345555555543 23689999999999866555543 1 1
Q ss_pred cccceEEEecCCCCC
Q 024042 144 ERVEKVVIASSGVNM 158 (273)
Q Consensus 144 ~~v~~~v~~~~~~~~ 158 (273)
-.++++++.++..+.
T Consensus 200 inl~Gi~igng~td~ 214 (437)
T PLN02209 200 INLQGYVLGNPITHI 214 (437)
T ss_pred eeeeeEEecCcccCh
Confidence 247899998887654
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.2e-07 Score=72.17 Aligned_cols=102 Identities=24% Similarity=0.229 Sum_probs=76.1
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCC-Ce---EEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEec
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FN---VYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTS 129 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~---v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S 129 (273)
.-+++++||++.+. ..|..+...+... +. +..+++++. +.........+.....+.+++...+.+++.++|||
T Consensus 59 ~~pivlVhG~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 59 KEPIVLVHGLGGGY-GNFLPLDYRLAILGWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred CceEEEEccCcCCc-chhhhhhhhhcchHHHhccccccccccc--CCCccccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 45899999997776 7777777666654 55 788887754 22222233455556666677777788999999999
Q ss_pred cchHHHHHHHHhCC--cccceEEEecCCCCC
Q 024042 130 YGGFVAYHMARMWP--ERVEKVVIASSGVNM 158 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~--~~v~~~v~~~~~~~~ 158 (273)
+||..+..++...+ .+|+.++.++++-..
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 99999999999887 789999999876543
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.7e-06 Score=67.97 Aligned_cols=225 Identities=13% Similarity=0.025 Sum_probs=122.0
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHH-HHhhcCCCeEEeecCCCCCCCCCC--------
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQ-VQFFAPHFNVYVPDLIFFGHSTTR-------- 98 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~-~~~l~~~~~v~~~d~~g~g~s~~~-------- 98 (273)
.++..||+++.....--+.-..+++.|.+++--|.-+.. ...|... +..+.+++.-.....||=|.-...
T Consensus 423 wa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l 502 (682)
T COG1770 423 WATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLL 502 (682)
T ss_pred EEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhh
Confidence 344458877653221101112356778888888744333 1223322 233444455555667775543211
Q ss_pred CccccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhh
Q 024042 99 SIQRTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERID 176 (273)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (273)
....++.++.+....+++.- ..++++++|-|.||++....+...|+.++++|+-.|.++........-. ......+.
T Consensus 503 ~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~sl-PLT~~E~~ 581 (682)
T COG1770 503 NKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSL-PLTVTEWD 581 (682)
T ss_pred hccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCC-CCCccchh
Confidence 12236667666666666542 2368999999999999999999999999999999888775432211100 01112233
Q ss_pred hccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCc---EEEEeCCCC
Q 024042 177 HLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKA---RLEIIENTS 250 (273)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~---~~~~~~~~g 250 (273)
.+-.|..+.....+..-.-+.+ ...+-..++|+..|..|+.|..-...++.+++ +.+. -+.+=-++|
T Consensus 582 EWGNP~d~e~y~yikSYSPYdN-------V~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aG 654 (682)
T COG1770 582 EWGNPLDPEYYDYIKSYSPYDN-------VEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAG 654 (682)
T ss_pred hhCCcCCHHHHHHHhhcCchhc-------cccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEeccccc
Confidence 3334443333333222111111 01122227899999999999776555555555 1122 222213589
Q ss_pred CCcCcCChhhH
Q 024042 251 HVPQIENPGLF 261 (273)
Q Consensus 251 H~~~~~~~~~~ 261 (273)
|...-...+.+
T Consensus 655 HgG~SgRf~~l 665 (682)
T COG1770 655 HGGASGRFQRL 665 (682)
T ss_pred CCCCCCchHHH
Confidence 97655444433
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.3e-07 Score=68.68 Aligned_cols=107 Identities=19% Similarity=0.254 Sum_probs=67.5
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHh---hcCCCeEEeecCCCCCCCCCCCcc-ccHHHHHHHHHHHHHHh----CCccE
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQF---FAPHFNVYVPDLIFFGHSTTRSIQ-RTELFQAASLGKLLEKI----GVERF 123 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~---l~~~~~v~~~d~~g~g~s~~~~~~-~~~~~~~~~~~~~~~~~----~~~~i 123 (273)
..+..++|+||+..+-...-.+.++- .......+.+.||..|.--.-..+ .+...-..++..+++.+ ..++|
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 46779999999886663333333332 333378899999976653221111 12222233444444444 56889
Q ss_pred EEEEeccchHHHHHHHHhC--------CcccceEEEecCCCCC
Q 024042 124 SVVGTSYGGFVAYHMARMW--------PERVEKVVIASSGVNM 158 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~~--------~~~v~~~v~~~~~~~~ 158 (273)
+|++||||..+++....+. +.+++-+|+.+|-.+.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 9999999999999887652 3457788888775554
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.4e-07 Score=74.01 Aligned_cols=129 Identities=16% Similarity=0.097 Sum_probs=89.7
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEc--CCCCch--hHhHHHHHH---hhcCC-CeEEeecCCCCCCCCCC
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIH--GFGPEA--IWQWRKQVQ---FFAPH-FNVYVPDLIFFGHSTTR 98 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~h--G~~~~~--~~~~~~~~~---~l~~~-~~v~~~d~~g~g~s~~~ 98 (273)
...|...||++|+...+.| ...++.|+++..+ ...-.. ...-....+ .+..+ |.|+..|.||.|.|.+.
T Consensus 21 ~v~V~MRDGvrL~~dIy~P---a~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~ 97 (563)
T COG2936 21 DVMVPMRDGVRLAADIYRP---AGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGV 97 (563)
T ss_pred eeeEEecCCeEEEEEEEcc---CCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcc
Confidence 3567778999999888763 3357788888888 322210 011112233 34455 99999999999999976
Q ss_pred Cccc-c-HHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 99 SIQR-T-ELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 99 ~~~~-~-~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
.... + ..+..-|+.+++.+... .+|..+|.|++|...+.+|+..|.-+++++...+..+.
T Consensus 98 ~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 98 FDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred cceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 5543 2 22334445555554433 78999999999999999999988889999988877664
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.1e-05 Score=60.30 Aligned_cols=97 Identities=21% Similarity=0.215 Sum_probs=61.1
Q ss_pred CCeEEEEcCCC--CchhHhHHHHHHhhc--CCCeEEeecCCCCCCCCCCCcc-ccHHHHHHHHHHHHH---HhCCccEEE
Q 024042 54 KPSLVLIHGFG--PEAIWQWRKQVQFFA--PHFNVYVPDLIFFGHSTTRSIQ-RTELFQAASLGKLLE---KIGVERFSV 125 (273)
Q Consensus 54 ~~~vi~~hG~~--~~~~~~~~~~~~~l~--~~~~v~~~d~~g~g~s~~~~~~-~~~~~~~~~~~~~~~---~~~~~~i~l 125 (273)
..+||++||.| .+. .....+.+.+. ....+..+. .|-+. .... ....++++.+-+.+. .+. +-+.+
T Consensus 26 ~~PvViwHGlgD~~~~-~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L~-~G~na 99 (306)
T PLN02606 26 SVPFVLFHGFGGECSN-GKVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKELS-EGYNI 99 (306)
T ss_pred CCCEEEECCCCcccCC-chHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhhc-CceEE
Confidence 45899999998 444 46666766665 244333333 22222 1111 234444444433333 232 45999
Q ss_pred EEeccchHHHHHHHHhCCc--ccceEEEecCCC
Q 024042 126 VGTSYGGFVAYHMARMWPE--RVEKVVIASSGV 156 (273)
Q Consensus 126 ~G~S~Gg~~a~~~a~~~~~--~v~~~v~~~~~~ 156 (273)
+|+|.||.++-.++++.|+ .|+.+|.++++-
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 9999999999999999876 499999988654
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.9e-06 Score=64.06 Aligned_cols=108 Identities=19% Similarity=0.111 Sum_probs=65.5
Q ss_pred CCCCCeEEEEcCCCCchhHhH---HHHHHhhcCC-CeEEeecCC--------------CCCCCCCCCc--------cccH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQW---RKQVQFFAPH-FNVYVPDLI--------------FFGHSTTRSI--------QRTE 104 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~---~~~~~~l~~~-~~v~~~d~~--------------g~g~s~~~~~--------~~~~ 104 (273)
+.+-|+++++||..++. ..+ ..+-...... +.++.+|-. |-+.|-.... .+..
T Consensus 51 ~~~ipV~~~l~G~t~~~-~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~ 129 (316)
T COG0627 51 GRDIPVLYLLSGLTCNE-PNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQW 129 (316)
T ss_pred CCCCCEEEEeCCCCCCC-CceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccch
Confidence 56778999999987764 222 1222222222 555555322 2222221110 1222
Q ss_pred HH-HHHHHHHHHHHhCC-----ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC
Q 024042 105 LF-QAASLGKLLEKIGV-----ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK 159 (273)
Q Consensus 105 ~~-~~~~~~~~~~~~~~-----~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~ 159 (273)
+. ..+.+-..+++... ++..++||||||.-|+.+|.++|++++.+...++.....
T Consensus 130 ~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 130 ETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred hHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 22 34555544443322 268999999999999999999999999999988877765
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=98.53 E-value=6.4e-07 Score=74.01 Aligned_cols=124 Identities=15% Similarity=0.074 Sum_probs=74.1
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCC---chhH-hHHHHHHhhcCCCeEEeecCC----CCCCCCCC--Ccc
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP---EAIW-QWRKQVQFFAPHFNVYVPDLI----FFGHSTTR--SIQ 101 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~---~~~~-~~~~~~~~l~~~~~v~~~d~~----g~g~s~~~--~~~ 101 (273)
.+|...+..+... .....++.|+||++||.+. +... ....++.... .+.|+.+++| |+...... ...
T Consensus 75 sEdcl~l~i~~p~--~~~~~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~-~~~vv~~~yRlg~~g~~~~~~~~~~~n 151 (493)
T cd00312 75 SEDCLYLNVYTPK--NTKPGNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGD-NVIVVSINYRLGVLGFLSTGDIELPGN 151 (493)
T ss_pred CCcCCeEEEEeCC--CCCCCCCCCEEEEEcCCccccCCCCCCChHHHHhcCC-CEEEEEecccccccccccCCCCCCCcc
Confidence 3466677777653 1112456799999999542 2201 1222222211 3889999999 33322211 112
Q ss_pred c---cHHHHHHHHHHHHHHhC--CccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCCC
Q 024042 102 R---TELFQAASLGKLLEKIG--VERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVNM 158 (273)
Q Consensus 102 ~---~~~~~~~~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~~ 158 (273)
. +.....+++.+.++.++ .++|.|+|+|.||..+..++... +..++++|+.++....
T Consensus 152 ~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 152 YGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 2 33334455555566654 47899999999999998887762 3458888888775543
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.51 E-value=0.00011 Score=58.85 Aligned_cols=128 Identities=16% Similarity=0.135 Sum_probs=80.5
Q ss_pred eEEecC--CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhh-------------------cCCCeEEe
Q 024042 28 QTIDID--DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFF-------------------APHFNVYV 86 (273)
Q Consensus 28 ~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l-------------------~~~~~v~~ 86 (273)
-++.+. .+..|.||...++ .....+|.||.+-|+++++ ..- .+..++ .+...++-
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~--~~P~~dPlvLWLnGGPGCS-Sl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLf 122 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESE--NNPETDPLVLWLNGGPGCS-SLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILF 122 (454)
T ss_pred ceEECCCCCCceEEEEEEEcc--CCCCCCCEEEEeCCCCCcc-chh-hhhhhcCCeEEcCCCCcceeCCccccccccEEE
Confidence 366765 5788999988643 2245678999999998877 332 222221 12257888
Q ss_pred ecCC-CCCCCCCCCcc---ccHHHHHHHHHHHH----HHh---CCccEEEEEeccchHHHHHHHHh----CC------cc
Q 024042 87 PDLI-FFGHSTTRSIQ---RTELFQAASLGKLL----EKI---GVERFSVVGTSYGGFVAYHMARM----WP------ER 145 (273)
Q Consensus 87 ~d~~-g~g~s~~~~~~---~~~~~~~~~~~~~~----~~~---~~~~i~l~G~S~Gg~~a~~~a~~----~~------~~ 145 (273)
+|.| |.|.|-..... .+.+..++|...++ ++. ..+++.|.|-|++|+..-.+|.+ .. -.
T Consensus 123 Ld~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iN 202 (454)
T KOG1282|consen 123 LDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNIN 202 (454)
T ss_pred EecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCccc
Confidence 9988 77776533321 23444455544444 333 34789999999999766665543 21 24
Q ss_pred cceEEEecCCCCCC
Q 024042 146 VEKVVIASSGVNMK 159 (273)
Q Consensus 146 v~~~v~~~~~~~~~ 159 (273)
++|+++-+|..+..
T Consensus 203 LkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 203 LKGYAIGNGLTDPE 216 (454)
T ss_pred ceEEEecCcccCcc
Confidence 78888888766543
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.9e-06 Score=66.27 Aligned_cols=67 Identities=25% Similarity=0.422 Sum_probs=52.7
Q ss_pred Hhhhh-ccEEEEecCCCCCCChHHHHHHHHHhcC-CcEEEEeCCCCCCcCcCChh---hHHHHHHHHhcccC
Q 024042 207 FNDFV-HDVLIVWGDQDQIFPLKMATELKELLGK-KARLEIIENTSHVPQIENPG---LFNSIVKNFLRGSL 273 (273)
Q Consensus 207 ~~~~~-~p~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~---~~~~~i~~fl~~~l 273 (273)
..++. .|+|+++|.+|..+|......+.+.... ..+...+++++|........ +..+.+.+|+.+.+
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 33444 5999999999999999999999888844 56888889999987654333 67788889988754
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.50 E-value=5.4e-06 Score=59.14 Aligned_cols=81 Identities=12% Similarity=0.214 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCCCe-EEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccc
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFN-VYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYG 131 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~-v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~G 131 (273)
++..|||+.|||.+. ..+..+. +..++. ++++|||..-. +. + -.+.+++.|+++|||
T Consensus 10 ~~~LilfF~GWg~d~-~~f~hL~--~~~~~D~l~~yDYr~l~~--------d~-----~------~~~y~~i~lvAWSmG 67 (213)
T PF04301_consen 10 GKELILFFAGWGMDP-SPFSHLI--LPENYDVLICYDYRDLDF--------DF-----D------LSGYREIYLVAWSMG 67 (213)
T ss_pred CCeEEEEEecCCCCh-HHhhhcc--CCCCccEEEEecCccccc--------cc-----c------cccCceEEEEEEeHH
Confidence 357999999999988 6655543 234454 45678872211 10 1 124589999999999
Q ss_pred hHHHHHHHHhCCcccceEEEecCCCC
Q 024042 132 GFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 132 g~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
=.+|..+....| ++..+.+++...
T Consensus 68 Vw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 68 VWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred HHHHHHHhccCC--cceeEEEECCCC
Confidence 999988876543 666677766543
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.2e-06 Score=70.13 Aligned_cols=127 Identities=18% Similarity=0.110 Sum_probs=70.2
Q ss_pred EEecCCcceEEeecCCccC---CCCCCCCCeEEEEcCCCCchhHhHHHHHHhhc-----------------CCCeEEeec
Q 024042 29 TIDIDDETTLHFWGPKLED---DHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFA-----------------PHFNVYVPD 88 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~---~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~-----------------~~~~v~~~d 88 (273)
.-+..+...++.|..|... ...+-++-+|+|++|..|+. .+.+.++.... .+++.+++|
T Consensus 61 ~t~~a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSy-KQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVD 139 (973)
T KOG3724|consen 61 LTPQADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSY-KQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVD 139 (973)
T ss_pred ccCCCCceEEEEecccccccccccccCCCceEEEecCCCCch-HHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEc
Confidence 3333355556655544221 11233567999999998888 66665553322 126777777
Q ss_pred CCCCCCCCCCCccccHHHHHHHHHHHHHH----h-C--------CccEEEEEeccchHHHHHHHHh---CCcccceEEEe
Q 024042 89 LIFFGHSTTRSIQRTELFQAASLGKLLEK----I-G--------VERFSVVGTSYGGFVAYHMARM---WPERVEKVVIA 152 (273)
Q Consensus 89 ~~g~g~s~~~~~~~~~~~~~~~~~~~~~~----~-~--------~~~i~l~G~S~Gg~~a~~~a~~---~~~~v~~~v~~ 152 (273)
+-+-- .........++++-+.+.++. . + ...|+++||||||.+|..++.. .++.|.-++..
T Consensus 140 FnEe~---tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITl 216 (973)
T KOG3724|consen 140 FNEEF---TAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITL 216 (973)
T ss_pred ccchh---hhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhh
Confidence 75300 001112444444443333332 2 1 2459999999999999777653 23446666666
Q ss_pred cCCCCCC
Q 024042 153 SSGVNMK 159 (273)
Q Consensus 153 ~~~~~~~ 159 (273)
+++...+
T Consensus 217 ssPH~a~ 223 (973)
T KOG3724|consen 217 SSPHAAP 223 (973)
T ss_pred cCcccCC
Confidence 6554433
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.9e-06 Score=65.10 Aligned_cols=149 Identities=16% Similarity=0.174 Sum_probs=93.5
Q ss_pred HHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCC------
Q 024042 111 LGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLP------ 181 (273)
Q Consensus 111 ~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 181 (273)
+.++++.. .++++++.|.|-=|..++..|.. ..||++++-+.-.............+..+. .+...+.+
T Consensus 159 vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~LN~~~~l~h~y~~yG~-~ws~a~~dY~~~gi 236 (367)
T PF10142_consen 159 VQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVLNMKANLEHQYRSYGG-NWSFAFQDYYNEGI 236 (367)
T ss_pred HHHHHHhhcCCCccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccCCcHHHHHHHHHHhCC-CCccchhhhhHhCc
Confidence 34444444 56899999999999999999995 468998887654332211111111111110 00000000
Q ss_pred ---CChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCCh
Q 024042 182 ---ESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP 258 (273)
Q Consensus 182 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 258 (273)
.....+..+.. -..|-....++..|-++|.|..|++..++....+.+.++....+..+||++|....
T Consensus 237 ~~~l~tp~f~~L~~-------ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~--- 306 (367)
T PF10142_consen 237 TQQLDTPEFDKLMQ-------IVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG--- 306 (367)
T ss_pred hhhcCCHHHHHHHH-------hcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---
Confidence 01111111111 11344555677779999999999999999999999999667788899999998654
Q ss_pred hhHHHHHHHHhcc
Q 024042 259 GLFNSIVKNFLRG 271 (273)
Q Consensus 259 ~~~~~~i~~fl~~ 271 (273)
..+.+.+..|+..
T Consensus 307 ~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 307 SDVVQSLRAFYNR 319 (367)
T ss_pred HHHHHHHHHHHHH
Confidence 5666777777754
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.3e-06 Score=69.48 Aligned_cols=105 Identities=20% Similarity=0.162 Sum_probs=67.4
Q ss_pred CCCeEEEEcCCCCchhHh--HHHHHHhhcCC--CeEEeecCCCCCCCCCCCc-------cccHHHHHHHHHHHHHHhC--
Q 024042 53 KKPSLVLIHGFGPEAIWQ--WRKQVQFFAPH--FNVYVPDLIFFGHSTTRSI-------QRTELFQAASLGKLLEKIG-- 119 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~--~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~-------~~~~~~~~~~~~~~~~~~~-- 119 (273)
++|++|++.|=+ ..... ...+...|++. -.+++++.|.+|.|.+... ..+.++..+|+..+++++.
T Consensus 28 ~gpifl~~ggE~-~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYIGGEG-PIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE--SS--HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-ccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 366666665533 32121 12244455554 6899999999999986433 2377788888888887652
Q ss_pred -----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 120 -----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 120 -----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
..|++++|-|+||.+|..+-.++|+.+.+.+..++++..
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 248999999999999999999999999999998887654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.1e-06 Score=54.38 Aligned_cols=59 Identities=19% Similarity=0.306 Sum_probs=52.4
Q ss_pred ccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 212 HDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 212 ~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.|+|++.++.|+.+|.+.++.+.+.+ ++.+++.+++.||........-+.+.+.+||..
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l-~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARL-PGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHC-CCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 49999999999999999999999999 889999999999987755556788888898863
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.00013 Score=54.95 Aligned_cols=100 Identities=15% Similarity=0.202 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCCCchh-HhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH---hCCccEEEE
Q 024042 53 KKPSLVLIHGFGPEAI-WQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK---IGVERFSVV 126 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~-~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~l~ 126 (273)
...++|+.||.|.+.. .....+.+.+.. +..+.++.. |.+....-.....++++.+-+.+.. +. +-++++
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~-~G~naI 99 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELS-QGYNIV 99 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhh-CcEEEE
Confidence 4568999999986651 233344444422 244444443 2221111112444454444443333 32 459999
Q ss_pred EeccchHHHHHHHHhCCc--ccceEEEecCCC
Q 024042 127 GTSYGGFVAYHMARMWPE--RVEKVVIASSGV 156 (273)
Q Consensus 127 G~S~Gg~~a~~~a~~~~~--~v~~~v~~~~~~ 156 (273)
|+|.||.++-.++.+.++ .|+.+|.++++-
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 999999999999999876 599999988653
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.34 E-value=6.1e-06 Score=65.32 Aligned_cols=121 Identities=17% Similarity=0.176 Sum_probs=74.3
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhc-CC-CeEEeecCCC--CCC--------CC
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFA-PH-FNVYVPDLIF--FGH--------ST 96 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~-~~-~~v~~~d~~g--~g~--------s~ 96 (273)
.+|...|..|... ....+.|++|+|||.+ ++....+-. ...|+ ++ +.|+++++|- .|. ..
T Consensus 76 sEDCL~LNIwaP~----~~a~~~PVmV~IHGG~y~~Gs~s~~~yd-gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~ 150 (491)
T COG2272 76 SEDCLYLNIWAPE----VPAEKLPVMVYIHGGGYIMGSGSEPLYD-GSALAARGDVVVVSVNYRLGALGFLDLSSLDTED 150 (491)
T ss_pred cccceeEEeeccC----CCCCCCcEEEEEeccccccCCCcccccC-hHHHHhcCCEEEEEeCcccccceeeehhhccccc
Confidence 3467777777763 2456689999999954 222121111 23343 34 8899999982 111 11
Q ss_pred CCCccccHHH---HHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCC
Q 024042 97 TRSIQRTELF---QAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVN 157 (273)
Q Consensus 97 ~~~~~~~~~~---~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~ 157 (273)
.........+ ..+++.+.|+++|. ++|.|+|+|.||+.++.+.+.- ...++++|+.++...
T Consensus 151 ~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 151 AFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 1111123333 45667777777755 6799999999998887776541 234777788877665
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.31 E-value=6.6e-05 Score=58.50 Aligned_cols=36 Identities=28% Similarity=0.264 Sum_probs=31.2
Q ss_pred cEEEEEeccchHHHHHHHHhCCcccceEEEecCCCC
Q 024042 122 RFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 122 ~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
|++++|+|.||.+|...|.-.|..+++++=-+++..
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999998888876665544
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=98.25 E-value=7.1e-06 Score=68.67 Aligned_cols=124 Identities=15% Similarity=0.069 Sum_probs=65.9
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch----hHhHHHHHHhhcCCCeEEeecCC----CCCCCCCC--C-c
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA----IWQWRKQVQFFAPHFNVYVPDLI----FFGHSTTR--S-I 100 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~----~~~~~~~~~~l~~~~~v~~~d~~----g~g~s~~~--~-~ 100 (273)
.+|-..|..+... ......+.|++|++||.+... ...+....-...+..-|+.++|| |+-.+... . .
T Consensus 105 sEDCL~LnI~~P~--~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~g 182 (535)
T PF00135_consen 105 SEDCLYLNIYTPS--NASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSG 182 (535)
T ss_dssp ES---EEEEEEET--SSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBS
T ss_pred CchHHHHhhhhcc--ccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCch
Confidence 4466777777753 112222579999999954221 02222222222344999999999 33222211 1 3
Q ss_pred cccHHHHHH---HHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCC
Q 024042 101 QRTELFQAA---SLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVN 157 (273)
Q Consensus 101 ~~~~~~~~~---~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~ 157 (273)
...+.++.. ++.+.|..+|. ++|.|+|+|.||..+..++... ...++++|+.++...
T Consensus 183 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 183 NYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 445555544 44444555544 7899999999998887766552 346999999888543
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=0.00041 Score=51.37 Aligned_cols=109 Identities=9% Similarity=0.074 Sum_probs=79.7
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccc
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYG 131 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~G 131 (273)
...|.|+++-...++.....+...+.|-....|+..|+-....-.-.....+.+++.+-+.+.++.+|.+ +++++.|.-
T Consensus 101 ~pdPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP 179 (415)
T COG4553 101 KPDPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQP 179 (415)
T ss_pred CCCCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecC
Confidence 3456777777766666467777888888888999999875444444455679999999999999999965 888888877
Q ss_pred hHHH-----HHHHHhCCcccceEEEecCCCCCCCc
Q 024042 132 GFVA-----YHMARMWPERVEKVVIASSGVNMKRG 161 (273)
Q Consensus 132 g~~a-----~~~a~~~~~~v~~~v~~~~~~~~~~~ 161 (273)
+.-. ++.+...|.....+++++++.+....
T Consensus 180 ~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~n 214 (415)
T COG4553 180 TVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKN 214 (415)
T ss_pred CchHHHHHHHHHhcCCCCCCceeeeecCccccccC
Confidence 6433 33334457778899999988765543
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=4.9e-05 Score=60.53 Aligned_cols=104 Identities=15% Similarity=0.048 Sum_probs=63.8
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHh-------------------hcCCCeEEeecCC-CCCCCCC--CCccccHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQF-------------------FAPHFNVYVPDLI-FFGHSTT--RSIQRTELFQA 108 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~-------------------l~~~~~v~~~d~~-g~g~s~~--~~~~~~~~~~~ 108 (273)
..++|.++++-|.++++ ..+..+.+. +...-.++.+|+| |.|.|.. .....+.....
T Consensus 98 p~~rPvi~wlNGGPGcS-S~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~ 176 (498)
T COG2939 98 PANRPVIFWLNGGPGCS-SVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAG 176 (498)
T ss_pred CCCCceEEEecCCCChH-hhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccc
Confidence 45689999999999988 666555321 1112468899955 8888874 22222333333
Q ss_pred HHHHHHHH-------HhCC--ccEEEEEeccchHHHHHHHHhCCc---ccceEEEecCC
Q 024042 109 ASLGKLLE-------KIGV--ERFSVVGTSYGGFVAYHMARMWPE---RVEKVVIASSG 155 (273)
Q Consensus 109 ~~~~~~~~-------~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~---~v~~~v~~~~~ 155 (273)
+|+..+.+ +... .+.+|+|.|+||+-+..+|...-+ ..++++.+.+.
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 44433333 3332 589999999999988777765433 24555555443
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=4.8e-05 Score=56.64 Aligned_cols=108 Identities=21% Similarity=0.119 Sum_probs=61.3
Q ss_pred CCCCCCeEEEEcCCC--CchhHhHHHHHHhhcCC----CeEEeecCCCC---CCCCCCCccccHHHHHHHHHHHHHHh--
Q 024042 50 KTLKKPSLVLIHGFG--PEAIWQWRKQVQFFAPH----FNVYVPDLIFF---GHSTTRSIQRTELFQAASLGKLLEKI-- 118 (273)
Q Consensus 50 ~~~~~~~vi~~hG~~--~~~~~~~~~~~~~l~~~----~~v~~~d~~g~---g~s~~~~~~~~~~~~~~~~~~~~~~~-- 118 (273)
...+.|++++.||-. .+. ..++.+-..+.++ -.++.+|+-.- ..... .........++.+.=.++..
T Consensus 94 ~~~k~pvl~~~DG~~~~~~g-~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~-~n~~~~~~L~~eLlP~v~~~yp 171 (299)
T COG2382 94 PLEKYPVLYLQDGQDWFRSG-RIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELH-CNEAYWRFLAQELLPYVEERYP 171 (299)
T ss_pred ccccccEEEEeccHHHHhcC-ChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc-ccHHHHHHHHHHhhhhhhccCc
Confidence 356789999999832 222 2333333333333 44555554310 00000 00112222233333333322
Q ss_pred ---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC
Q 024042 119 ---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK 159 (273)
Q Consensus 119 ---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~ 159 (273)
....-+|.|.|+||.+++..+..+|+++..++.-+|.....
T Consensus 172 ~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 172 TSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWT 215 (299)
T ss_pred ccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccC
Confidence 12456899999999999999999999999999888866543
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.5e-05 Score=61.62 Aligned_cols=105 Identities=18% Similarity=0.295 Sum_probs=80.2
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcc---ccHHHHHHHHHHHHHHhCC---ccEE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ---RTELFQAASLGKLLEKIGV---ERFS 124 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~---~~~~~~~~~~~~~~~~~~~---~~i~ 124 (273)
+.+.|+|++.-|++.+...........| +-+-+.+++|-++.|.+.+.+ .++++.+.|...+++.+.. ++.+
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Ll--d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWI 137 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLL--DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWI 137 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhh--ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCce
Confidence 3467889998898765412223333444 256788999999999877665 3888888998888887732 7788
Q ss_pred EEEeccchHHHHHHHHhCCcccceEEEecCCCC
Q 024042 125 VVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 125 l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
--|-|-||+.++.+=.-+|+.+++.|...++.+
T Consensus 138 STG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 138 STGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred ecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 899999999999999999999999998776654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.02 E-value=3e-05 Score=59.71 Aligned_cols=86 Identities=22% Similarity=0.171 Sum_probs=62.8
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh----CCccEEEEE
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI----GVERFSVVG 127 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~G 127 (273)
....-||+.|-|+-. ..-+.+...|.+. +.|+.+|---|-.|. .+.+..+.|+..+++.+ +.+++.|+|
T Consensus 259 sd~~av~~SGDGGWr-~lDk~v~~~l~~~gvpVvGvdsLRYfW~~-----rtPe~~a~Dl~r~i~~y~~~w~~~~~~liG 332 (456)
T COG3946 259 SDTVAVFYSGDGGWR-DLDKEVAEALQKQGVPVVGVDSLRYFWSE-----RTPEQIAADLSRLIRFYARRWGAKRVLLIG 332 (456)
T ss_pred cceEEEEEecCCchh-hhhHHHHHHHHHCCCceeeeehhhhhhcc-----CCHHHHHHHHHHHHHHHHHhhCcceEEEEe
Confidence 445667888877666 6667788889887 999999955443333 35666777777777655 668999999
Q ss_pred eccchHHHHHHHHhCCc
Q 024042 128 TSYGGFVAYHMARMWPE 144 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~ 144 (273)
+|+|+-+.-..-.+.|.
T Consensus 333 ySfGADvlP~~~n~L~~ 349 (456)
T COG3946 333 YSFGADVLPFAYNRLPP 349 (456)
T ss_pred ecccchhhHHHHHhCCH
Confidence 99999877666666554
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=98.02 E-value=5.6e-05 Score=60.26 Aligned_cols=82 Identities=15% Similarity=0.177 Sum_probs=55.1
Q ss_pred hHHHHHHhhcCC-C------eEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHH
Q 024042 70 QWRKQVQFFAPH-F------NVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMA 139 (273)
Q Consensus 70 ~~~~~~~~l~~~-~------~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a 139 (273)
.|..+++.|.+. | ...-+|+|- ... ..+.....+...++.. ..++++|+||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~-------~~~-~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL-------SPA-ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh-------chh-hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 688888888663 3 223368772 111 2334444455555433 358999999999999999988
Q ss_pred HhCCc------ccceEEEecCCCCCC
Q 024042 140 RMWPE------RVEKVVIASSGVNMK 159 (273)
Q Consensus 140 ~~~~~------~v~~~v~~~~~~~~~ 159 (273)
...+. .|+++|.++++....
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCCCC
Confidence 87642 499999999876544
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.0018 Score=50.29 Aligned_cols=58 Identities=19% Similarity=0.293 Sum_probs=47.4
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhc-----------------------CC-cEEEEeCCCCCCcCcCChhhHHHHHHHH
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLG-----------------------KK-ARLEIIENTSHVPQIENPGLFNSIVKNF 268 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~f 268 (273)
++|+..|+.|.+|+.-..+.+.+.+. .+ .++..+.++||+.. .+|+...+.+.+|
T Consensus 235 ~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~~f 313 (319)
T PLN02213 235 RSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRW 313 (319)
T ss_pred eEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHHHH
Confidence 99999999999999887777777651 11 45666778999986 5899999999999
Q ss_pred hcc
Q 024042 269 LRG 271 (273)
Q Consensus 269 l~~ 271 (273)
++.
T Consensus 314 i~~ 316 (319)
T PLN02213 314 ISG 316 (319)
T ss_pred HcC
Confidence 975
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00063 Score=50.10 Aligned_cols=40 Identities=20% Similarity=0.367 Sum_probs=35.1
Q ss_pred CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
+.++..++|||+||.+++.....+|+.+...++++|..-.
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 4467899999999999999999999999999999985543
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.88 E-value=5.2e-05 Score=56.36 Aligned_cols=103 Identities=15% Similarity=0.107 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCCCchh--HhHH---HHHHhhcCCCeEEeecCCCCCCCCC-CCc-cccHHHHHHHHHHHHHHhCC--ccE
Q 024042 53 KKPSLVLIHGFGPEAI--WQWR---KQVQFFAPHFNVYVPDLIFFGHSTT-RSI-QRTELFQAASLGKLLEKIGV--ERF 123 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~--~~~~---~~~~~l~~~~~v~~~d~~g~g~s~~-~~~-~~~~~~~~~~~~~~~~~~~~--~~i 123 (273)
+..+||+.||+|.+.. ..+. .+++..-.+.-|.+++.- -+.+.. ... ...+.++++.+-+.++.... +-+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 4568999999986531 2333 344444445556666652 111100 000 12344455555555544321 569
Q ss_pred EEEEeccchHHHHHHHHhCCc-ccceEEEecCCC
Q 024042 124 SVVGTSYGGFVAYHMARMWPE-RVEKVVIASSGV 156 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~~~~-~v~~~v~~~~~~ 156 (273)
+++|+|.||.++-.++.+.++ .|+.+|.++++-
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 999999999999999999764 599999988653
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.003 Score=46.13 Aligned_cols=96 Identities=16% Similarity=0.174 Sum_probs=56.2
Q ss_pred CCCeEEEEcC--CCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh----CC----c
Q 024042 53 KKPSLVLIHG--FGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI----GV----E 121 (273)
Q Consensus 53 ~~~~vi~~hG--~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~~----~ 121 (273)
+..+|=|+-| +|....-.|+.+.+.|++. |.|++.-+.- + ........+..+.....++.+ +. -
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t----fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~l 90 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T----FDHQAIAREVWERFERCLRALQKRGGLDPAYL 90 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C----CcHHHHHHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 3445556666 3344446789999999887 9999987751 1 000011111111112222221 21 3
Q ss_pred cEEEEEeccchHHHHHHHHhCCcccceEEEec
Q 024042 122 RFSVVGTSYGGFVAYHMARMWPERVEKVVIAS 153 (273)
Q Consensus 122 ~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~ 153 (273)
+++-+|||+|+-+-+.+...++..-++-++++
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 67789999999998888877765556666665
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.001 Score=54.44 Aligned_cols=84 Identities=15% Similarity=0.143 Sum_probs=58.8
Q ss_pred HHHhhcCCCeEEeecCCCCCCCCC--CC-ccc-----------cHHHHHHHHHHHHHHh---CCccEEEEEeccchHHHH
Q 024042 74 QVQFFAPHFNVYVPDLIFFGHSTT--RS-IQR-----------TELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAY 136 (273)
Q Consensus 74 ~~~~l~~~~~v~~~d~~g~g~s~~--~~-~~~-----------~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~ 136 (273)
+...++++|.++.-|- ||..+.. .. ... .+...+..-.++++.+ ..+.-...|.|-||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 5667778899999986 6665543 11 111 1222223334444444 346788999999999999
Q ss_pred HHHHhCCcccceEEEecCCCCC
Q 024042 137 HMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 137 ~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
..|+++|+.+++++.-+|....
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHHhChhhcCeEEeCCchHHH
Confidence 9999999999999999987654
|
It also includes several bacterial homologues of unknown function. |
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0053 Score=49.17 Aligned_cols=118 Identities=15% Similarity=0.168 Sum_probs=74.6
Q ss_pred EecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHH--HHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHH
Q 024042 30 IDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWR--KQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 30 ~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~--~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
+..+.+..+.|+.. +++-+.|..|++.|+-. . +.++ .+++.|.. --.+.-|.|--|.+-......-....
T Consensus 270 ~~D~~reEi~yYFn-----PGD~KPPL~VYFSGyR~-a-EGFEgy~MMk~Lg~-PfLL~~DpRleGGaFYlGs~eyE~~I 341 (511)
T TIGR03712 270 LVDSKRQEFIYYFN-----PGDFKPPLNVYFSGYRP-A-EGFEGYFMMKRLGA-PFLLIGDPRLEGGAFYLGSDEYEQGI 341 (511)
T ss_pred EecCCCCeeEEecC-----CcCCCCCeEEeeccCcc-c-CcchhHHHHHhcCC-CeEEeeccccccceeeeCcHHHHHHH
Confidence 33345666666665 33667788899999765 2 3333 23444432 23445577766665433322234445
Q ss_pred HHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCC
Q 024042 108 AASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 108 ~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
.+.|.+.++.++. +.++|-|-|||..-|+.++++.. ..++|+--|-..
T Consensus 342 ~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~N 391 (511)
T TIGR03712 342 INVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccc
Confidence 6667777788876 56999999999999999999863 566666555443
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00021 Score=52.14 Aligned_cols=97 Identities=18% Similarity=0.228 Sum_probs=61.3
Q ss_pred CeEEEEcCCCCchhHh--HHHHHHhhcCC--CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC--CccEEEEEe
Q 024042 55 PSLVLIHGFGPEAIWQ--WRKQVQFFAPH--FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG--VERFSVVGT 128 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~--~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~G~ 128 (273)
.++|++||++.+. .. ...+.+.+.+. ..|+++|. |-| ..........++++.+.+.+.... .+-+.++|.
T Consensus 24 ~P~ii~HGigd~c-~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSC-SSLSMANLTQLLEELPGSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCccc-ccchHHHHHHHHHhCCCCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 6799999998776 33 55666665553 77888876 334 111111234444444444333221 256899999
Q ss_pred ccchHHHHHHHHhCCc-ccceEEEecCC
Q 024042 129 SYGGFVAYHMARMWPE-RVEKVVIASSG 155 (273)
Q Consensus 129 S~Gg~~a~~~a~~~~~-~v~~~v~~~~~ 155 (273)
|.||.++-.++..-++ .++..|.++++
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 9999999998887543 47888877764
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.0011 Score=46.69 Aligned_cols=136 Identities=24% Similarity=0.289 Sum_probs=75.8
Q ss_pred hhCCCceeEEecCCcc---eEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH----------------HHHhhcCC
Q 024042 21 ASAGLSSQTIDIDDET---TLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK----------------QVQFFAPH 81 (273)
Q Consensus 21 ~~~~~~~~~~~~~~g~---~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~----------------~~~~l~~~ 81 (273)
..+++....+.+ |+. ...+....+ + .-..+...+|++||.|--....|.+ +-+..+.+
T Consensus 68 k~c~Lkr~~ip~-d~~e~E~~SFiF~s~-~-~lt~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~G 144 (297)
T KOG3967|consen 68 KDCNLKRVSIPV-DATESEPKSFIFMSE-D-ALTNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEG 144 (297)
T ss_pred hcCCceeEeecC-CCCCCCCcceEEECh-h-HhcCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcC
Confidence 456678888887 442 222222210 0 1134456899999987544344532 12344556
Q ss_pred CeEEeecCCC---CCCCCCCCcc--ccHHHHHHHH-HHHHHHhCCccEEEEEeccchHHHHHHHHhCCc--ccceEEEec
Q 024042 82 FNVYVPDLIF---FGHSTTRSIQ--RTELFQAASL-GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE--RVEKVVIAS 153 (273)
Q Consensus 82 ~~v~~~d~~g---~g~s~~~~~~--~~~~~~~~~~-~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~v~~~v~~~ 153 (273)
|.|++.+.-- +-.+...+.. .+..+.+..+ ..++.-...+.+.++.||+||...+.+..++|+ +|-++.+.+
T Consensus 145 ygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTD 224 (297)
T KOG3967|consen 145 YGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTD 224 (297)
T ss_pred CcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeec
Confidence 8888887531 1111111111 1222222221 222333355889999999999999999999875 577777766
Q ss_pred CCCCCC
Q 024042 154 SGVNMK 159 (273)
Q Consensus 154 ~~~~~~ 159 (273)
++...+
T Consensus 225 s~~~~p 230 (297)
T KOG3967|consen 225 SAMGSP 230 (297)
T ss_pred ccccCc
Confidence 664433
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00026 Score=54.97 Aligned_cols=100 Identities=20% Similarity=0.218 Sum_probs=69.2
Q ss_pred CeEEEEcCCCCchhHhHHH---HHHhhcCC--CeEEeecCCCCCCCCCCCcc----------ccHHHHHHHHHHHHHHhC
Q 024042 55 PSLVLIHGFGPEAIWQWRK---QVQFFAPH--FNVYVPDLIFFGHSTTRSIQ----------RTELFQAASLGKLLEKIG 119 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~~~~---~~~~l~~~--~~v~~~d~~g~g~s~~~~~~----------~~~~~~~~~~~~~~~~~~ 119 (273)
.+|+|.-|.-++- +.+.. ++..++.. --++..+.|-+|+|.+-... .+.++..+|...++..+.
T Consensus 81 gPIffYtGNEGdi-e~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK 159 (492)
T KOG2183|consen 81 GPIFFYTGNEGDI-EWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLK 159 (492)
T ss_pred CceEEEeCCcccH-HHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHh
Confidence 5788888876665 43322 22223332 56788899999998754322 245555666666666552
Q ss_pred ------CccEEEEEeccchHHHHHHHHhCCcccceEEEecCC
Q 024042 120 ------VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG 155 (273)
Q Consensus 120 ------~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~ 155 (273)
..+|+.+|-|+||++|..+-.+||..+.|....+++
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 258999999999999999999999988777665544
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00012 Score=41.30 Aligned_cols=48 Identities=19% Similarity=0.306 Sum_probs=28.0
Q ss_pred CCCceeEEecCCcceEEeecCCccC--CCCCCCCCeEEEEcCCCCchhHhH
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLED--DHKTLKKPSLVLIHGFGPEAIWQW 71 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~--~~~~~~~~~vi~~hG~~~~~~~~~ 71 (273)
...+.+.++++||..|..+....+. .....++|+|++.||+.+++ ..|
T Consensus 10 Y~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss-~~w 59 (63)
T PF04083_consen 10 YPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSS-DDW 59 (63)
T ss_dssp ---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--G-GGG
T ss_pred CCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccCh-HHH
Confidence 3468889999999999877765332 22346789999999999888 666
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00015 Score=49.90 Aligned_cols=40 Identities=20% Similarity=0.067 Sum_probs=30.8
Q ss_pred CCccEEEEEeccchHHHHHHHHhCCc----ccceEEEecCCCCC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWPE----RVEKVVIASSGVNM 158 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~ 158 (273)
...+++++|||+||.+|..++..... ....++..+++...
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 56889999999999999999887654 45666666665443
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00035 Score=47.23 Aligned_cols=37 Identities=27% Similarity=0.218 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 106 FQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 106 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
...+.+.++.+.....++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 3445555555555557899999999999999888763
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.009 Score=41.78 Aligned_cols=106 Identities=22% Similarity=0.172 Sum_probs=62.0
Q ss_pred CCCCCeEEEEcCCCCchhHhH-----------HHHHHhh---cCCCeEEeecCCCCCCCCCC----CccccHHHHHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQW-----------RKQVQFF---APHFNVYVPDLIFFGHSTTR----SIQRTELFQAASLG 112 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~-----------~~~~~~l---~~~~~v~~~d~~g~g~s~~~----~~~~~~~~~~~~~~ 112 (273)
+....+.++++|.+.+..... +...... ...-.+-++-|-||-.-... ......+.-+..+.
T Consensus 16 d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~ 95 (177)
T PF06259_consen 16 DTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLA 95 (177)
T ss_pred CCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHH
Confidence 556678999999775441111 1111111 12234444444444322100 11112334455666
Q ss_pred HHHHHhC-----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCC
Q 024042 113 KLLEKIG-----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV 156 (273)
Q Consensus 113 ~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~ 156 (273)
.+++.+. ..++.++|||+|+.++-.++...+..++.+|+++++.
T Consensus 96 ~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 96 RFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 6666552 2479999999999999999888667799999887654
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0019 Score=54.47 Aligned_cols=121 Identities=16% Similarity=0.078 Sum_probs=67.6
Q ss_pred CCcceEEeecCCccCCCCCC-CCCeEEEEcCCCCchh--HhHH--HHHHhhcC-CCeEEeecCC----CCCCCC--CCCc
Q 024042 33 DDETTLHFWGPKLEDDHKTL-KKPSLVLIHGFGPEAI--WQWR--KQVQFFAP-HFNVYVPDLI----FFGHST--TRSI 100 (273)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~-~~~~vi~~hG~~~~~~--~~~~--~~~~~l~~-~~~v~~~d~~----g~g~s~--~~~~ 100 (273)
+|...+..+... .... +.|++|++||.+-... ..+. .....+.. ...|+.+.+| |+.... ..+.
T Consensus 94 EDCLylNV~tp~----~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~g 169 (545)
T KOG1516|consen 94 EDCLYLNVYTPQ----GCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPG 169 (545)
T ss_pred CCCceEEEeccC----CCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCC
Confidence 466677776653 1111 1799999999653220 1221 11122233 3778888888 221111 1133
Q ss_pred cccHHHHHH---HHHHHHHHhC--CccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCC
Q 024042 101 QRTELFQAA---SLGKLLEKIG--VERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVN 157 (273)
Q Consensus 101 ~~~~~~~~~---~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~ 157 (273)
.....++.. ++..-|...+ .++|.++|||.||..+..+.... ...+..+|..++...
T Consensus 170 N~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 170 NLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 444545444 4445555554 47899999999999987776531 234666666665543
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0028 Score=50.73 Aligned_cols=106 Identities=23% Similarity=0.367 Sum_probs=77.0
Q ss_pred CCCCCeEEEEcCCCCch-------hHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcc-------ccHHHHHHHHHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEA-------IWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ-------RTELFQAASLGKLLE 116 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~-------~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~-------~~~~~~~~~~~~~~~ 116 (273)
..+.|..++|-|=|... ...|..+++.+ +-.|+.++.|-+|.|.+.... .+......|+..+++
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akkf--gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~ 160 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKF--GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIK 160 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHh--CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHH
Confidence 45678888888744332 11233333333 278999999999988654332 256677888888888
Q ss_pred HhCC-------ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 117 KIGV-------ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 117 ~~~~-------~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
.++. .+.+.+|-|+-|.++..+-.++|+.+.|.|..++++..
T Consensus 161 ~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 161 AMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred HHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 7632 38999999999999999999999999998888776643
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0008 Score=49.13 Aligned_cols=49 Identities=29% Similarity=0.226 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC----CcccceEEEecCCCC
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW----PERVEKVVIASSGVN 157 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~~~v~~~v~~~~~~~ 157 (273)
.+-+..+++..+ +++.+.|||.||.+|..++... .++|..+...+++..
T Consensus 72 ~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 72 LAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 444555555544 4699999999999999999874 357888887776544
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.045 Score=42.65 Aligned_cols=61 Identities=20% Similarity=0.391 Sum_probs=48.5
Q ss_pred ccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCc-CChhhHHHHHHHHhccc
Q 024042 212 HDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQI-ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 212 ~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 272 (273)
.+.+.+.+..|.++|.+..+++.+.. +.+++.+-+.++-|..+. ..|....+...+|++..
T Consensus 226 ~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 226 WNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred ccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 37899999999999999999886555 345666667788887655 57899999999998753
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.035 Score=49.78 Aligned_cols=97 Identities=14% Similarity=0.194 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCC-CCCccccHHHHHHHHHHHHHHhCC-ccEEEEEe
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHST-TRSIQRTELFQAASLGKLLEKIGV-ERFSVVGT 128 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~-~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~G~ 128 (273)
..+.|+++|+|.+-+.. .....++..|. .|-||... ...+..+++..+.....-++++.. .+..++|+
T Consensus 2120 ~se~~~~Ffv~pIEG~t-t~l~~la~rle---------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFT-TALESLASRLE---------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGY 2189 (2376)
T ss_pred cccCCceEEEeccccch-HHHHHHHhhcC---------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeecc
Confidence 46789999999988877 66777766553 34444322 223345777777777777777755 78999999
Q ss_pred ccchHHHHHHHHhCC--cccceEEEecCCCC
Q 024042 129 SYGGFVAYHMARMWP--ERVEKVVIASSGVN 157 (273)
Q Consensus 129 S~Gg~~a~~~a~~~~--~~v~~~v~~~~~~~ 157 (273)
|+|+.++..+|.... +....+|++++...
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 999999999887542 33566888876543
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0016 Score=50.02 Aligned_cols=152 Identities=18% Similarity=0.128 Sum_probs=82.4
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhh
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTG 192 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (273)
..+..+.++.+++-|.|--|..++..|...| ++.++|-...-.-........+....+. .+...+.+...+.+.+...
T Consensus 226 ~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDp-rv~aIvp~v~D~Lni~a~L~hiyrsYGg-nwpi~l~pyyaegi~erl~ 303 (507)
T COG4287 226 DELEQVEIKGFMVTGASKRGWTTWLTAIADP-RVFAIVPFVYDNLNIEAQLLHIYRSYGG-NWPIKLAPYYAEGIDERLE 303 (507)
T ss_pred hhhhheeeeeEEEeccccchHHHHHHHhcCc-chhhhhhhHHhhcccHHHHHHHHHhhCC-CCCcccchhHhhhHHHhhc
Confidence 3444456788999999999999999998877 4777664432111111101111111110 1111111111111111111
Q ss_pred hhhcc-------CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHH
Q 024042 193 LAVSK-------NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIV 265 (273)
Q Consensus 193 ~~~~~-------~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 265 (273)
...+. ...........++..|-.++.++.|.+.+++.+...++.++....+..+||..|... +..+.+.+
T Consensus 304 tp~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl 380 (507)
T COG4287 304 TPLFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI---NQFIKESL 380 (507)
T ss_pred CHHHHHHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh---HHHHHHHH
Confidence 10000 001111122234555999999999999999999999999955566788899999754 33344444
Q ss_pred HHHh
Q 024042 266 KNFL 269 (273)
Q Consensus 266 ~~fl 269 (273)
..|+
T Consensus 381 ~~fl 384 (507)
T COG4287 381 EPFL 384 (507)
T ss_pred HHHH
Confidence 4444
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.001 Score=42.55 Aligned_cols=45 Identities=22% Similarity=0.361 Sum_probs=28.3
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHH
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQ 74 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~ 74 (273)
.+.....++ +|..||+.... ....+..+||++|||+++- ..|..+
T Consensus 67 ~~phf~t~I-~g~~iHFih~r----s~~~~aiPLll~HGWPgSf-~Ef~~v 111 (112)
T PF06441_consen 67 SFPHFKTEI-DGLDIHFIHVR----SKRPNAIPLLLLHGWPGSF-LEFLKV 111 (112)
T ss_dssp TS-EEEEEE-TTEEEEEEEE------S-TT-EEEEEE--SS--G-GGGHHH
T ss_pred cCCCeeEEE-eeEEEEEEEee----CCCCCCeEEEEECCCCccH-HhHHhh
Confidence 567777778 89999998876 3456677999999999988 555443
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0021 Score=52.87 Aligned_cols=85 Identities=14% Similarity=0.120 Sum_probs=51.1
Q ss_pred HhHHHHHHhhcCC-Ce-----EEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh----CCccEEEEEeccchHHHHHH
Q 024042 69 WQWRKQVQFFAPH-FN-----VYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI----GVERFSVVGTSYGGFVAYHM 138 (273)
Q Consensus 69 ~~~~~~~~~l~~~-~~-----v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~ 138 (273)
..|..+++.|.+. |. ...+|+|-.. .....-+.+...+...++.. +.++++|+||||||.+++.+
T Consensus 156 ~vw~kLIe~L~~iGY~~~nL~gAPYDWRls~-----~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyF 230 (642)
T PLN02517 156 FVWAVLIANLARIGYEEKNMYMAAYDWRLSF-----QNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHF 230 (642)
T ss_pred eeHHHHHHHHHHcCCCCCceeecccccccCc-----cchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHH
Confidence 3567888887764 54 3344554111 00112233334444444432 35899999999999999987
Q ss_pred HHhCC---------------cccceEEEecCCCCC
Q 024042 139 ARMWP---------------ERVEKVVIASSGVNM 158 (273)
Q Consensus 139 a~~~~---------------~~v~~~v~~~~~~~~ 158 (273)
..... ..|++.|.++++..-
T Consensus 231 L~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 231 MKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 76321 237889999886543
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0014 Score=48.38 Aligned_cols=24 Identities=29% Similarity=0.241 Sum_probs=20.4
Q ss_pred CCccEEEEEeccchHHHHHHHHhC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 447899999999999999888753
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0048 Score=50.43 Aligned_cols=105 Identities=16% Similarity=0.116 Sum_probs=60.2
Q ss_pred CCCCeEEEEcCCCCch--hHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC--ccEEE
Q 024042 52 LKKPSLVLIHGFGPEA--IWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV--ERFSV 125 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~--~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l 125 (273)
.++-.|+.+||.|.-. ....+...+.+++ +..|+.+||.-..+...+.........--++..-...+|. ++|++
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~allG~TgEriv~ 473 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCALLGSTGERIVL 473 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEEE
Confidence 3455789999976211 1222222333322 3899999987555444333322222223344444455554 89999
Q ss_pred EEeccchHHHHHHHHh----CCcccceEEEecCCC
Q 024042 126 VGTSYGGFVAYHMARM----WPERVEKVVIASSGV 156 (273)
Q Consensus 126 ~G~S~Gg~~a~~~a~~----~~~~v~~~v~~~~~~ 156 (273)
+|-|.||.+.+-.+.+ .-...+++++.-++.
T Consensus 474 aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 474 AGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred eccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 9999999876555543 223357888766544
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0059 Score=43.07 Aligned_cols=74 Identities=18% Similarity=0.095 Sum_probs=42.8
Q ss_pred CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH----hCCccEEEEEeccchHHHHHHHHh------CCcccceEEE
Q 024042 82 FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK----IGVERFSVVGTSYGGFVAYHMARM------WPERVEKVVI 151 (273)
Q Consensus 82 ~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~a~~------~~~~v~~~v~ 151 (273)
..+..++||-..... .-..+...-+.++...++. -...+++|+|+|.|+.++..++.. ..++|.++++
T Consensus 40 ~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp EEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred eEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 667777777322111 1112333334444444443 344789999999999999999877 2356889999
Q ss_pred ecCCCC
Q 024042 152 ASSGVN 157 (273)
Q Consensus 152 ~~~~~~ 157 (273)
++-+..
T Consensus 118 fGdP~~ 123 (179)
T PF01083_consen 118 FGDPRR 123 (179)
T ss_dssp ES-TTT
T ss_pred ecCCcc
Confidence 886554
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0036 Score=49.83 Aligned_cols=86 Identities=10% Similarity=0.172 Sum_probs=49.5
Q ss_pred HhHHHHHHhhcCC-Ce------EEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHh
Q 024042 69 WQWRKQVQFFAPH-FN------VYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 69 ~~~~~~~~~l~~~-~~------v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..|..+++.|..- |. -..+|+|-.-... ...+.........+....+..+.+|++|++|||||.+...+...
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~-e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w 202 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNS-EERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKW 202 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCCh-hHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhc
Confidence 4677788777543 33 4556776211100 11112223333333333333355999999999999999999988
Q ss_pred CCc--------ccceEEEecCC
Q 024042 142 WPE--------RVEKVVIASSG 155 (273)
Q Consensus 142 ~~~--------~v~~~v~~~~~ 155 (273)
+++ .|++.+-++++
T Consensus 203 ~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 203 VEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred ccccchhHHHHHHHHHHccCch
Confidence 765 25555555543
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0088 Score=40.84 Aligned_cols=45 Identities=22% Similarity=0.214 Sum_probs=36.6
Q ss_pred HHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 114 LLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 114 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
+++..-..+.++-|.||||..|..+.-++|+...++|.+++..+.
T Consensus 94 v~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 94 VIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 334333456788999999999999999999999999999886653
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0059 Score=48.91 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHH
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
.+.+.+.+.+....++++.|||+||.+|..++.
T Consensus 265 ~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 265 RQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 344555555555568999999999999998765
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0062 Score=48.92 Aligned_cols=35 Identities=20% Similarity=0.326 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHH
Q 024042 106 FQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 106 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
...+.+.++++.....++++.|||+||.+|..++.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 34556667777666678999999999999999875
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0054 Score=43.83 Aligned_cols=66 Identities=15% Similarity=0.089 Sum_probs=42.6
Q ss_pred hhcCCCeEEeecCCCCCCCCC-----CCc----cccHHHHHHHHHHHHHHhCC-ccEEEEEeccchHHHHHHHHhC
Q 024042 77 FFAPHFNVYVPDLIFFGHSTT-----RSI----QRTELFQAASLGKLLEKIGV-ERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 77 ~l~~~~~v~~~d~~g~g~s~~-----~~~----~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.+....+|++|-||=...... ... .....+..+....++++.+. ++++|+|||.|+.+..++..++
T Consensus 41 ~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 41 AFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 454457888888873211111 111 12344455556667777644 6899999999999999998775
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.033 Score=37.66 Aligned_cols=76 Identities=12% Similarity=0.089 Sum_probs=49.9
Q ss_pred eEEEEcCCCCchhHhHHHHHHhhcCCC-eEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHH
Q 024042 56 SLVLIHGFGPEAIWQWRKQVQFFAPHF-NVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFV 134 (273)
Q Consensus 56 ~vi~~hG~~~~~~~~~~~~~~~l~~~~-~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~ 134 (273)
.||++-|||..+ .....+. +.+++ -++++|++.... +.+.. ..+.+-++.+|||-.+
T Consensus 13 LIvyFaGwgtpp-s~v~HLi--lpeN~dl~lcYDY~dl~l------dfDfs-------------Ay~hirlvAwSMGVwv 70 (214)
T COG2830 13 LIVYFAGWGTPP-SAVNHLI--LPENHDLLLCYDYQDLNL------DFDFS-------------AYRHIRLVAWSMGVWV 70 (214)
T ss_pred EEEEEecCCCCH-HHHhhcc--CCCCCcEEEEeehhhcCc------ccchh-------------hhhhhhhhhhhHHHHH
Confidence 888999998887 5555443 34454 456778763211 11111 1256779999999999
Q ss_pred HHHHHHhCCcccceEEEecCC
Q 024042 135 AYHMARMWPERVEKVVIASSG 155 (273)
Q Consensus 135 a~~~a~~~~~~v~~~v~~~~~ 155 (273)
|-++....+ ++..+.+++.
T Consensus 71 AeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 71 AERVLQGIR--LKSATAINGT 89 (214)
T ss_pred HHHHHhhcc--ccceeeecCC
Confidence 999988764 6666666653
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.02 Score=43.38 Aligned_cols=128 Identities=15% Similarity=0.121 Sum_probs=80.8
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH---HHHHHh---hc-------CCCeEEeecCC-CCCC
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW---RKQVQF---FA-------PHFNVYVPDLI-FFGH 94 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~---~~~~~~---l~-------~~~~v~~~d~~-g~g~ 94 (273)
++++.++..+.+|.+-+++. .....|..+.+.|..+.+...+ +.+.+. ++ +.-.++.+|.| |.|.
T Consensus 7 ~v~vr~~a~~F~wly~~~~~-~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGf 85 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYATAN-VKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGF 85 (414)
T ss_pred ceeeecCceEEEEEeeeccc-cccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCce
Confidence 45555677777776643322 2256788899998765542333 333221 11 23467788877 7777
Q ss_pred CCCCCcc---ccHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHHhCC---------cccceEEEecCC
Q 024042 95 STTRSIQ---RTELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMARMWP---------ERVEKVVIASSG 155 (273)
Q Consensus 95 s~~~~~~---~~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~~~~---------~~v~~~v~~~~~ 155 (273)
|.-.... .+..+.+.|+.++++.+ ...|++|+-.|+||-+|..++...- ..+.++++-+++
T Consensus 86 SyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSW 165 (414)
T KOG1283|consen 86 SYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSW 165 (414)
T ss_pred eeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcc
Confidence 7543322 26677788888888865 3368999999999999988876532 235667776655
Q ss_pred CC
Q 024042 156 VN 157 (273)
Q Consensus 156 ~~ 157 (273)
..
T Consensus 166 IS 167 (414)
T KOG1283|consen 166 IS 167 (414)
T ss_pred cC
Confidence 43
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0051 Score=48.72 Aligned_cols=33 Identities=30% Similarity=0.293 Sum_probs=23.6
Q ss_pred HHHHHHHHHhCCc--cEEEEEeccchHHHHHHHHh
Q 024042 109 ASLGKLLEKIGVE--RFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 109 ~~~~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..+..+++..... +|++.|||+||.+|+.+|..
T Consensus 214 ~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 214 AKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3344444444333 49999999999999999864
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0056 Score=48.54 Aligned_cols=37 Identities=27% Similarity=0.249 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhCCc--cEEEEEeccchHHHHHHHHh
Q 024042 105 LFQAASLGKLLEKIGVE--RFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~ 141 (273)
++..+++..+++..... ++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 34455666666665432 68999999999999998865
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.012 Score=46.15 Aligned_cols=89 Identities=20% Similarity=0.217 Sum_probs=50.7
Q ss_pred CCCCCeEEEEcCCCC-chhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc---cccHHHHHHHHHHHHHHhCCccEEEE
Q 024042 51 TLKKPSLVLIHGFGP-EAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI---QRTELFQAASLGKLLEKIGVERFSVV 126 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~-~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~l~ 126 (273)
.+++-.+|+.||+.+ +. ..|...+......+.=..+..+|+-....... ..--...++++.+.+....++++..+
T Consensus 77 ~k~~HLvVlthGi~~~~~-~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfv 155 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADM-EYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFV 155 (405)
T ss_pred cCCceEEEeccccccccH-HHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeee
Confidence 445568999999877 44 66777666665552211223333322211111 11122334445555544557899999
Q ss_pred EeccchHHHHHHHH
Q 024042 127 GTSYGGFVAYHMAR 140 (273)
Q Consensus 127 G~S~Gg~~a~~~a~ 140 (273)
|||+||.++..+..
T Consensus 156 ghSLGGLvar~AIg 169 (405)
T KOG4372|consen 156 GHSLGGLVARYAIG 169 (405)
T ss_pred eeecCCeeeeEEEE
Confidence 99999988765543
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0088 Score=46.75 Aligned_cols=35 Identities=23% Similarity=0.296 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC
Q 024042 108 AASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 108 ~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.+.+..+++.... .+|++.|||+||.+|..+|...
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 4555666665543 3599999999999999988753
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.022 Score=44.35 Aligned_cols=41 Identities=34% Similarity=0.419 Sum_probs=32.1
Q ss_pred CCccEEEEEeccchHHHHHHHHhCCcc-----cceEEEecCCCCCC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWPER-----VEKVVIASSGVNMK 159 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~-----v~~~v~~~~~~~~~ 159 (273)
+.+|+.|+|||+|+.+.........++ |+.+++++.+....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 557899999999999888777654433 78899998776654
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.012 Score=47.70 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHH
Q 024042 106 FQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 106 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
...+.+.++++.....++++.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 34555666666666678999999999999999874
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.03 Score=44.45 Aligned_cols=36 Identities=22% Similarity=0.199 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhC----CccEEEEEeccchHHHHHHHHh
Q 024042 106 FQAASLGKLLEKIG----VERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 106 ~~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
+..+.+..+++.+. ..+|.+.|||+||.+|+.+|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34455666665552 1479999999999999988854
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.018 Score=45.73 Aligned_cols=34 Identities=24% Similarity=0.238 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHh
Q 024042 108 AASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 108 ~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
.+.+..+++.... .+|.+.|||+||.+|+..|..
T Consensus 200 l~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 200 QGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 4456666665543 369999999999999998864
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.022 Score=46.34 Aligned_cols=36 Identities=25% Similarity=0.287 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC
Q 024042 107 QAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 107 ~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
..+.+..+++.... .+|++.|||+||.+|..+|...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 34455556655533 3689999999999999888653
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.026 Score=46.08 Aligned_cols=35 Identities=29% Similarity=0.319 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCC-----ccEEEEEeccchHHHHHHHHh
Q 024042 107 QAASLGKLLEKIGV-----ERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 107 ~~~~~~~~~~~~~~-----~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..+.+..+++.... -+|.+.|||+||.+|+..|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34455566655532 479999999999999998853
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.082 Score=37.26 Aligned_cols=60 Identities=17% Similarity=0.219 Sum_probs=44.7
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHh---c-CCcEEEEeCCCCCCcCcCC---hhhHHHHHHHHhccc
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELL---G-KKARLEIIENTSHVPQIEN---PGLFNSIVKNFLRGS 272 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~~ 272 (273)
+++-|-|+.|.++...+.....+.+ + .....++.+++||+..+.- .+++...|.+|+.++
T Consensus 136 aLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 136 ALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred eeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 6777999999999887776666555 2 2355667889999865543 368888999998764
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.032 Score=45.44 Aligned_cols=35 Identities=29% Similarity=0.347 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCC-----ccEEEEEeccchHHHHHHHHh
Q 024042 107 QAASLGKLLEKIGV-----ERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 107 ~~~~~~~~~~~~~~-----~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..+.+..+++.+.. .+|.+.|||+||.+|..+|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 34445555555432 379999999999999998854
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.034 Score=45.42 Aligned_cols=35 Identities=29% Similarity=0.275 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhC-----C-ccEEEEEeccchHHHHHHHHh
Q 024042 107 QAASLGKLLEKIG-----V-ERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 107 ~~~~~~~~~~~~~-----~-~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..+.+..+++... . -+|.+.|||+||.+|+..|..
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 3455566666552 1 369999999999999988853
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.034 Score=45.37 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhC----CccEEEEEeccchHHHHHHHHh
Q 024042 107 QAASLGKLLEKIG----VERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 107 ~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..+++..+++.+. ..++.+.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 3456666666553 1369999999999999998854
|
|
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.64 Score=36.99 Aligned_cols=98 Identities=16% Similarity=0.202 Sum_probs=48.7
Q ss_pred CccEEEEEeccchHHHHHHHH----hCCcccceEEEecCCCCCCCcc---hHHHhhhhh-hhhhhhccCCCChHHHHHHh
Q 024042 120 VERFSVVGTSYGGFVAYHMAR----MWPERVEKVVIASSGVNMKRGD---NEALVKRAN-LERIDHLMLPESASQLRTLT 191 (273)
Q Consensus 120 ~~~i~l~G~S~Gg~~a~~~a~----~~~~~v~~~v~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 191 (273)
.++++|.|.|.||.-++..+. ..|..++-..+.+++..+.... ...+..... ...+... ....+.. -
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~----C 229 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDNPDYSGNPCIRSFYSDVVGLQNW-SKSLPES----C 229 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccccCcccchhHHHHHHHHHHHHHh-hccCCHh----H
Confidence 378999999999988877554 3454444444444444432211 111111110 0000000 0000000 0
Q ss_pred hhhhccCCCCChhhHHhhhhccEEEEecCCCC
Q 024042 192 GLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQ 223 (273)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~ 223 (273)
....... -..+...++.+..|++++++.-|.
T Consensus 230 ~~~~~~~-C~f~q~~~~~I~tPlFivns~YD~ 260 (361)
T PF03283_consen 230 VAQYDPE-CFFPQYLYPYIKTPLFIVNSLYDS 260 (361)
T ss_pred HhccCcc-ccchHHHHhhcCcceeeehhhhCH
Confidence 0000011 457778888888899999998883
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.061 Score=42.24 Aligned_cols=37 Identities=30% Similarity=0.159 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHh
Q 024042 105 LFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..+.+++..+++....-++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4556677777777776789999999999999998865
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.069 Score=44.42 Aligned_cols=23 Identities=26% Similarity=0.303 Sum_probs=19.2
Q ss_pred CCccEEEEEeccchHHHHHHHHh
Q 024042 119 GVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 33579999999999999888764
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.11 Score=38.88 Aligned_cols=41 Identities=22% Similarity=0.263 Sum_probs=29.2
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCC
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG 155 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~ 155 (273)
.+.+...-.++.+-|||+||.+|..+..++. +-.+.+-+|+
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T KOG4540|consen 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 3334445578999999999999999988874 4455555543
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.11 Score=38.88 Aligned_cols=41 Identities=22% Similarity=0.263 Sum_probs=29.2
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCC
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG 155 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~ 155 (273)
.+.+...-.++.+-|||+||.+|..+..++. +-.+.+-+|+
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T COG5153 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 3334445578999999999999999988874 4455555543
|
|
| >PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.95 Score=28.43 Aligned_cols=83 Identities=18% Similarity=0.229 Sum_probs=55.4
Q ss_pred HhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccc-cHHHHHHHHHHHHHHhCCccEEEEEeccch--HHHHHHHHhCCc
Q 024042 69 WQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQR-TELFQAASLGKLLEKIGVERFSVVGTSYGG--FVAYHMARMWPE 144 (273)
Q Consensus 69 ~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg--~~a~~~a~~~~~ 144 (273)
..|..+.+.+..+ +..-.+.++..|.+....-.. ..+.-...+..+++.+...+++++|-|--. .+-..++.++|+
T Consensus 11 nly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~ 90 (100)
T PF09949_consen 11 NLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPG 90 (100)
T ss_pred HHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCC
Confidence 4566666666555 666666666665543222111 113446678888888888999999999665 455567888999
Q ss_pred ccceEEE
Q 024042 145 RVEKVVI 151 (273)
Q Consensus 145 ~v~~~v~ 151 (273)
+|.++.+
T Consensus 91 ~i~ai~I 97 (100)
T PF09949_consen 91 RILAIYI 97 (100)
T ss_pred CEEEEEE
Confidence 9998764
|
|
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.14 Score=42.38 Aligned_cols=53 Identities=21% Similarity=0.290 Sum_probs=33.7
Q ss_pred cHHHHHHHHHHHHHHhCC---ccEEEEEeccchHHHHHHHHhC-----Cc------ccceEEEecCC
Q 024042 103 TELFQAASLGKLLEKIGV---ERFSVVGTSYGGFVAYHMARMW-----PE------RVEKVVIASSG 155 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~~-----~~------~v~~~v~~~~~ 155 (273)
+.......+.+.+++.+. ++++.+||||||.++=.+...- |+ .-+++++++.+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 444444455555555433 6899999999999886665432 22 25677777765
|
|
| >KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=92.87 E-value=0.49 Score=38.54 Aligned_cols=118 Identities=17% Similarity=0.131 Sum_probs=61.3
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCC---ch-hHhHHHHHHhhcCC--CeEEeecCC----C---CCCCCCCCc
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP---EA-IWQWRKQVQFFAPH--FNVYVPDLI----F---FGHSTTRSI 100 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~---~~-~~~~~~~~~~l~~~--~~v~~~d~~----g---~g~s~~~~~ 100 (273)
|-.-+..|... +...+..++|.+-|.|- +. ...|. .+.|+.. .-|+.+++| | .+.....+.
T Consensus 119 DCLYlNVW~P~----~~p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPG 192 (601)
T KOG4389|consen 119 DCLYLNVWAPA----ADPYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPG 192 (601)
T ss_pred hceEEEEeccC----CCCCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCC
Confidence 55667777764 22334448888888652 22 12232 2334433 555666666 1 112222222
Q ss_pred cccHHH---HHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHh--CCcccceEEEecCCCC
Q 024042 101 QRTELF---QAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARM--WPERVEKVVIASSGVN 157 (273)
Q Consensus 101 ~~~~~~---~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~--~~~~v~~~v~~~~~~~ 157 (273)
...+-+ ..+++.+-+..+|. +++.|+|.|.|+.-...-... -...++..|+-++...
T Consensus 193 NmGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 193 NMGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred ccchHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 233333 34566666666654 689999999998644322221 1123566666555444
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.9 Score=33.48 Aligned_cols=41 Identities=22% Similarity=0.165 Sum_probs=29.6
Q ss_pred ccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhC
Q 024042 102 RTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.+..+-++.+.+.++.. ..++++++|+|.|+.++...+.+.
T Consensus 27 ~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 27 ESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred hHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 35555556666666552 337899999999999998887664
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function | Back alignment and domain information |
|---|
Probab=89.34 E-value=4.6 Score=30.98 Aligned_cols=29 Identities=28% Similarity=0.376 Sum_probs=22.2
Q ss_pred HHHHhCC-ccEEEEEeccchHHHHHHHHhC
Q 024042 114 LLEKIGV-ERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 114 ~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
+.+.+.. ++|.++|+|-|+.+|-.++..-
T Consensus 84 l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 84 LSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 3344433 7799999999999999888653
|
|
| >COG3673 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.72 E-value=12 Score=29.10 Aligned_cols=91 Identities=13% Similarity=0.021 Sum_probs=50.2
Q ss_pred CCCCCeEEEEcCC----CCchhHhHHHHHHhhcCC--CeEEeecCCCCCCCCCCCc----------------cccHHHHH
Q 024042 51 TLKKPSLVLIHGF----GPEAIWQWRKQVQFFAPH--FNVYVPDLIFFGHSTTRSI----------------QRTELFQA 108 (273)
Q Consensus 51 ~~~~~~vi~~hG~----~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~----------------~~~~~~~~ 108 (273)
+..+..|+|+-|. +.......-.+...|..+ .+++++=-+|.|.-..... .......+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 4456678888883 222212334455666653 6666666677775421110 01111111
Q ss_pred -HHHHHHHHHhCC-ccEEEEEeccchHHHHHHHHh
Q 024042 109 -ASLGKLLEKIGV-ERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 109 -~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
+...-+++++.. ++|.++|+|-|+.+|-.+|..
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 222233344433 789999999999999887764
|
|
| >KOG2385 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=84.96 E-value=3.7 Score=33.99 Aligned_cols=43 Identities=23% Similarity=0.274 Sum_probs=32.6
Q ss_pred CCccEEEEEeccchHHHHHHHHhC-----CcccceEEEecCCCCCCCc
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMW-----PERVEKVVIASSGVNMKRG 161 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~-----~~~v~~~v~~~~~~~~~~~ 161 (273)
|.+||.|+|+|.|+-+........ -+.|..+++++++......
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~ 492 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAK 492 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHH
Confidence 668999999999998887655422 2348889999888776543
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=84.64 E-value=6.9 Score=42.04 Aligned_cols=98 Identities=12% Similarity=0.025 Sum_probs=64.8
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC-CccEEEEEeccc
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG-VERFSVVGTSYG 131 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~G 131 (273)
..+.+++.|...++. ..+..+...+.....++.+..++.-... ....+....+....+.+.... ..+..+.|+|+|
T Consensus 3691 ~~~~l~~~h~~~r~~-~~~~~l~~~l~~~~~~~~l~~~~~~~d~--~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3691 GFPALFCRHEGLGTV-FDYEPLAVILEGDRHVLGLTCRHLLDDG--WQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred cccceeeechhhcch-hhhHHHHHHhCCCCcEEEEecccccccc--CCccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 346699999988887 6778888888777788887766542221 122345555555555555543 357899999999
Q ss_pred hHHHHHHHHhC---CcccceEEEec
Q 024042 132 GFVAYHMARMW---PERVEKVVIAS 153 (273)
Q Consensus 132 g~~a~~~a~~~---~~~v~~~v~~~ 153 (273)
|.++..++... .+.+.-+.++.
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEe
Confidence 99998887642 33455444443
|
|
| >COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=83.93 E-value=11 Score=27.45 Aligned_cols=63 Identities=14% Similarity=0.199 Sum_probs=34.9
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-C-eEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-F-NVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVV 126 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~-~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~ 126 (273)
..+..+|++.||...++...|..+-..+.+. | .|++...-|+. .++.+.+.++.-+.+.+.|+
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP-------------~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP-------------LVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred CcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC-------------cHHHHHHHHHHcCCceEEEe
Confidence 3455677777886666545565555555444 5 55554443332 14555566666666655544
|
|
| >PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=83.65 E-value=14 Score=28.27 Aligned_cols=84 Identities=7% Similarity=0.059 Sum_probs=46.7
Q ss_pred HHHhhcCC-CeEEeecCCCCCCCC------CCCccccHHHHHHHHHHHHHHhCC---ccEEEEEeccchHHHHHHHH---
Q 024042 74 QVQFFAPH-FNVYVPDLIFFGHST------TRSIQRTELFQAASLGKLLEKIGV---ERFSVVGTSYGGFVAYHMAR--- 140 (273)
Q Consensus 74 ~~~~l~~~-~~v~~~d~~g~g~s~------~~~~~~~~~~~~~~~~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~--- 140 (273)
-++++..+ ..++++.|.... |. .......-..+.+.+.+.+..+.. .++++.|.|+|+.-+...-.
T Consensus 53 a~E~l~~GD~A~va~QYSylP-Sw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~ 131 (289)
T PF10081_consen 53 ALEYLYGGDVAIVAMQYSYLP-SWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLD 131 (289)
T ss_pred HHHHHhCCCeEEEEecccccc-chHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHH
Confidence 34555555 888888764211 11 001111222233334444444432 56999999999876655432
Q ss_pred hCCcccceEEEecCCCCC
Q 024042 141 MWPERVEKVVIASSGVNM 158 (273)
Q Consensus 141 ~~~~~v~~~v~~~~~~~~ 158 (273)
..-++++++++.+++...
T Consensus 132 ~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 132 DLRDRVDGALWVGPPFFS 149 (289)
T ss_pred HhhhhcceEEEeCCCCCC
Confidence 233569999999886653
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 273 | ||||
| 2vf2_A | 311 | X-Ray Crystal Structure Of Hsad From Mycobacterium | 9e-14 | ||
| 2wud_A | 291 | Crystal Structure Of S114a Mutant Of Hsad From Myco | 2e-13 | ||
| 2d0d_A | 282 | Crystal Structure Of A Meta-Cleavage Product Hydrol | 5e-11 | ||
| 1iun_A | 282 | Meta-Cleavage Product Hydrolase From Pseudomonas Fl | 1e-10 | ||
| 1c4x_A | 285 | 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase | 1e-10 | ||
| 3bdi_A | 207 | Crystal Structure Of Predicted Cib-Like Hydrolase ( | 4e-09 | ||
| 1ehy_A | 294 | X-Ray Structure Of The Epoxide Hydrolase From Agrob | 1e-08 | ||
| 1u2e_A | 289 | Crystal Structure Of The C-C Bond Hydrolase Mhpc Le | 4e-07 | ||
| 1s8o_A | 555 | Human Soluble Epoxide Hydrolase Length = 555 | 1e-06 | ||
| 1cqz_A | 554 | Crystal Structure Of Murine Soluble Epoxide Hydrola | 2e-06 | ||
| 3ans_A | 336 | Human Soluble Epoxide Hydrolase In Complex With A S | 3e-06 | ||
| 3pdc_A | 344 | Crystal Structure Of Hydrolase Domain Of Human Solu | 3e-06 | ||
| 3qyj_A | 291 | Crystal Structure Of Alr0039, A Putative AlphaBETA | 1e-05 | ||
| 2zjf_A | 362 | Crystal Structure Of Mycobacterium Tuberculosis Epo | 1e-05 | ||
| 2e3j_A | 356 | The Crystal Structure Of Epoxide Hydrolase B (Rv193 | 1e-05 | ||
| 3cxu_A | 328 | Structure Of A Y149f Mutant Of Epoxide Hydrolase Fr | 2e-05 | ||
| 2cjp_A | 328 | Structure Of Potato (Solanum Tuberosum) Epoxide Hyd | 3e-05 | ||
| 4b9a_A | 301 | Structure Of A Putative Epoxide Hydrolase From Pseu | 4e-05 | ||
| 4etw_A | 264 | Structure Of The Enzyme-Acp Substrate Gatekeeper Co | 1e-04 | ||
| 3b12_A | 304 | Crystal Structure Of The Fluoroacetate Dehalogenase | 2e-04 | ||
| 4f0j_A | 315 | Crystal Structure Of A Probable Hydrolytic Enzyme ( | 2e-04 | ||
| 4f5z_A | 299 | Crystal Structure Of Rhodococcus Rhodochrous Haloal | 2e-04 | ||
| 1m33_A | 258 | Crystal Structure Of Bioh At 1.7 A Length = 258 | 2e-04 | ||
| 1y37_A | 304 | Structure Of Fluoroacetate Dehalogenase From Burkho | 2e-04 | ||
| 3sk0_A | 311 | Structure Of Rhodococcus Rhodochrous Haloalkane Deh | 2e-04 | ||
| 2v9z_A | 304 | Structure Of The Rhodococcus Haloalkane Dehalogenas | 3e-04 | ||
| 3g9x_A | 299 | Structure Of Haloalkane Dehalogenase Dhaa14 Mutant | 3e-04 | ||
| 1bn6_A | 294 | Haloalkane Dehalogenase From A Rhodococcus Species | 3e-04 | ||
| 4f60_A | 299 | Crystal Structure Of Rhodococcus Rhodochrous Haloal | 3e-04 | ||
| 3fbw_A | 299 | Structure Of Rhodococcus Rhodochrous Haloalkane Deh | 3e-04 | ||
| 3rk4_A | 299 | Structure Of Rhodococcus Rhodochrous Haloalkane Deh | 3e-04 | ||
| 3fwh_A | 299 | Structure Of Haloalkane Dehalogenase Mutant Dha15 ( | 3e-04 | ||
| 1cqw_A | 295 | Nai Cocrystallised With Haloalkane Dehalogenase Fro | 3e-04 | ||
| 4fwb_A | 292 | Structure Of Rhodococcus Rhodochrous Haloalkane Deh | 3e-04 |
| >pdb|2VF2|A Chain A, X-Ray Crystal Structure Of Hsad From Mycobacterium Tuberculosis Length = 311 | Back alignment and structure |
|
| >pdb|2WUD|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From Mycobacterium Tuberculosis Length = 291 | Back alignment and structure |
|
| >pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase (Cumd) A129v Mutant Length = 282 | Back alignment and structure |
|
| >pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal Length = 282 | Back alignment and structure |
|
| >pdb|1C4X|A Chain A, 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase (Bphd) From Rhodococcus Sp. Strain Rha1 Length = 285 | Back alignment and structure |
|
| >pdb|3BDI|A Chain A, Crystal Structure Of Predicted Cib-Like Hydrolase (Np_393672.1) From Thermoplasma Acidophilum At 1.45 A Resolution Length = 207 | Back alignment and structure |
|
| >pdb|1EHY|A Chain A, X-Ray Structure Of The Epoxide Hydrolase From Agrobacterium Radiobacter Ad1 Length = 294 | Back alignment and structure |
|
| >pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc Length = 289 | Back alignment and structure |
|
| >pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase Length = 555 | Back alignment and structure |
|
| >pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase. Length = 554 | Back alignment and structure |
|
| >pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A Synthetic Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor Length = 344 | Back alignment and structure |
|
| >pdb|3QYJ|A Chain A, Crystal Structure Of Alr0039, A Putative AlphaBETA HYDROLASE FROM Nostoc Sp Pcc 7120. Length = 291 | Back alignment and structure |
|
| >pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide Hydrolase B Complexed With An Inhibitor Length = 362 | Back alignment and structure |
|
| >pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938) From Mycobacterium Tuberculosis At 2.1 Angstrom Length = 356 | Back alignment and structure |
|
| >pdb|3CXU|A Chain A, Structure Of A Y149f Mutant Of Epoxide Hydrolase From Solanum Tuberosum Length = 328 | Back alignment and structure |
|
| >pdb|2CJP|A Chain A, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase I (Steh1) Length = 328 | Back alignment and structure |
|
| >pdb|4B9A|A Chain A, Structure Of A Putative Epoxide Hydrolase From Pseudomonas Aeruginosa. Length = 301 | Back alignment and structure |
|
| >pdb|4ETW|A Chain A, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex Required For Biotin Synthesis Length = 264 | Back alignment and structure |
|
| >pdb|3B12|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase D104 Mutant From Burkholderia Sp. Fa1 In Complex With Fluoroacetate Length = 304 | Back alignment and structure |
|
| >pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053) From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution Length = 315 | Back alignment and structure |
|
| >pdb|4F5Z|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant (l95v, A172v) Length = 299 | Back alignment and structure |
|
| >pdb|1M33|A Chain A, Crystal Structure Of Bioh At 1.7 A Length = 258 | Back alignment and structure |
|
| >pdb|1Y37|A Chain A, Structure Of Fluoroacetate Dehalogenase From Burkholderia Sp. Fa1 Length = 304 | Back alignment and structure |
|
| >pdb|3SK0|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Dhaa Mutant Dhaa12 Length = 311 | Back alignment and structure |
|
| >pdb|2V9Z|A Chain A, Structure Of The Rhodococcus Haloalkane Dehalogenase Mutant With Enhanced Enantioselectivity Length = 304 | Back alignment and structure |
|
| >pdb|3G9X|A Chain A, Structure Of Haloalkane Dehalogenase Dhaa14 Mutant I135f From Rhodococcus Rhodochrous Length = 299 | Back alignment and structure |
|
| >pdb|1BN6|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species Length = 294 | Back alignment and structure |
|
| >pdb|4F60|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant (t148l, G171q, A172v, C176f) Length = 299 | Back alignment and structure |
|
| >pdb|3FBW|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Dhaa Mutant C176y Length = 299 | Back alignment and structure |
|
| >pdb|3RK4|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant Dhaa31 Length = 299 | Back alignment and structure |
|
| >pdb|3FWH|A Chain A, Structure Of Haloalkane Dehalogenase Mutant Dha15 (I135fC176Y) FROM Rhodococcus Rhodochrous Length = 299 | Back alignment and structure |
|
| >pdb|1CQW|A Chain A, Nai Cocrystallised With Haloalkane Dehalogenase From A Rhodococcus Species Length = 295 | Back alignment and structure |
|
| >pdb|4FWB|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 - Trichloropropane Length = 292 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 4e-46
Identities = 63/289 (21%), Positives = 96/289 (33%), Gaps = 51/289 (17%)
Query: 25 LSSQTIDIDDETTLHFW--GPKLEDDHKTLKKPSLVLIHGFGP--EAIWQWRKQVQFFAP 80
+ + H G + P++VL+HG GP A WR + A
Sbjct: 7 IIEKRFPSGT-LASHALVAGDP--------QSPAVVLLHGAGPGAHAASNWRPIIPDLAE 57
Query: 81 HFNVYVPDLIFFGHS-----TTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVA 135
+F V PDLI FG S I + + L+ G+E+ +VG S GG V
Sbjct: 58 NFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVT 117
Query: 136 YHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL----------------------- 172
+ PER +KV + S L +
Sbjct: 118 LQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENF 177
Query: 173 --------ERIDHLMLPES-ASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQ 223
R + PE Q + ++P HDVL+ G QD+
Sbjct: 178 PGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDR 237
Query: 224 IFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272
I PL + L + L K A L +++ H Q+E ++ R +
Sbjct: 238 IVPLDTSLYLTKHL-KHAELVVLDRCGHWAQLERWDAMGPMLMEHFRAA 285
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 4e-45
Identities = 59/283 (20%), Positives = 106/283 (37%), Gaps = 48/283 (16%)
Query: 28 QTIDIDDETTLHFW--GPKLEDDHKTLKKPSLVLIHGFGP--EAIWQWRKQVQFFAPHFN 83
+D+D LH+ G ++VL+HG GP + + + + A HF+
Sbjct: 16 AEVDVDGPLKLHYHEAGVG--------NDQTVVLLHGGGPGAASWTNFSRNIAVLARHFH 67
Query: 84 VYVPDLIFFGHSTT-RSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW 142
V D +GHS + + A +L L +++G+ R +VG + GG A A +
Sbjct: 68 VLAVDQPGYGHSDKRAEHGQFNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDY 127
Query: 143 PERVEKVV-IASSGVNM------------------KRGDNEALVKRANL----------- 172
P R ++V + G+++ E L +
Sbjct: 128 PARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPE 187
Query: 173 ---ERIDHLMLPESASQLRTLTGLAVSKNLDIVPDF-FFNDFVHDVLIVWGDQDQIFPLK 228
+R PES + R + + + + VL++WG +D++ PL
Sbjct: 188 LVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLD 247
Query: 229 MATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271
A + + +A+L + H Q+E FN + FL G
Sbjct: 248 GALVALKTI-PRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 7e-45
Identities = 52/247 (21%), Positives = 99/247 (40%), Gaps = 32/247 (12%)
Query: 55 PSLVLIHGFGP--EAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTEL-FQAASL 111
++LIHG GP A WR + + + V PD++ FG + +
Sbjct: 26 QPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHI 85
Query: 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVV-IASSGVNMKR--GDNEALVK 168
+++ + +E+ +VG ++GG +A A + ERV+++V + ++G G N
Sbjct: 86 IGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGY 145
Query: 169 RANLERIDHLM-----------------------LPESASQLRTLTGLAVSKNLDIVPDF 205
++E + +L+ P ++ + +D +
Sbjct: 146 TPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASS 205
Query: 206 F--FNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNS 263
++ LI+ G +DQ+ PL + L EL+ +A+L + H QIE FN
Sbjct: 206 DEDIKTLPNETLIIHGREDQVVPLSSSLRLGELI-DRAQLHVFGRCGHWTQIEQTDRFNR 264
Query: 264 IVKNFLR 270
+V F
Sbjct: 265 LVVEFFN 271
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 9e-45
Identities = 34/245 (13%), Positives = 75/245 (30%), Gaps = 33/245 (13%)
Query: 57 LVLIHGFGPEAIWQWRKQVQFFA--PHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKL 114
++ +HG + + + + DL G+S S ++ + +
Sbjct: 24 IIFLHGLSLDK-QSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISPSTSDNVLETLIEAI 82
Query: 115 LEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVN----------------- 157
E IG RF + G SYGG++A +A ++ V + +
Sbjct: 83 EEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEE 142
Query: 158 -----------MKRGDNEALVKRANLERIDHLMLPESASQLRT-LTGLAVSKNLDIVPDF 205
++ +L++P + +T + L + +
Sbjct: 143 DINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKL 202
Query: 206 FFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIV 265
++ I+ G DQ+ + +L + + ++ T H I+
Sbjct: 203 KNINYQFPFKIMVGRNDQVVGYQEQLKLINHN-ENGEIVLLNRTGHNLMIDQREAVGFHF 261
Query: 266 KNFLR 270
FL
Sbjct: 262 DLFLD 266
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 1e-42
Identities = 51/252 (20%), Positives = 90/252 (35%), Gaps = 37/252 (14%)
Query: 55 PSLVLIHGFGPEA-IW--QWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTEL-FQAAS 110
+++++HG GP A W +R F + V + D F S + A +
Sbjct: 34 ETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARA 93
Query: 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVV-IASSGVNMKRGDNE----- 164
+ L++ + ++R +VG + GG A + A +P+R+ K++ + G+
Sbjct: 94 VKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGI 153
Query: 165 ----ALVKRANLERI---------DHLMLPESASQLRTLTGLAVSKNLDIV------PDF 205
L + E + D ++ E Q R ++L
Sbjct: 154 KLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPL 213
Query: 206 FFNDFVHD-------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP 258
D I WG D+ PL +L + ARL + Q E+
Sbjct: 214 STWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDARLHVFSKCGAWAQWEHA 272
Query: 259 GLFNSIVKNFLR 270
FN +V +FLR
Sbjct: 273 DEFNRLVIDFLR 284
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 5e-42
Identities = 52/273 (19%), Positives = 94/273 (34%), Gaps = 33/273 (12%)
Query: 23 AGLSSQTIDIDDETT-LHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH 81
S I T + GP+ P LVL+HG + W + ++
Sbjct: 43 VRCKSFYISTRFGQTHVIASGPE--------DAPPLVLLHGALFSS-TMWYPNIADWSSK 93
Query: 82 FNVYVPDLIFFGHSTT-RSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140
+ Y D+I + + ++ T A L + + +G+E+ ++G S GG +
Sbjct: 94 YRTYAVDIIGDKNKSIPENVSGTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLL 153
Query: 141 MWPERVEKVVIASSGVNMKRGDNE------ALVKRANLERIDHLMLPES----------- 183
PERV+ I S ++ L +E + M+ +
Sbjct: 154 RMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETFLNWMMNDQNVLHPIFVKQF 213
Query: 184 -ASQLRTLTGLAVSKNLDIVPDFFFNDFVHD----VLIVWGDQDQIFPLKMATELKELLG 238
A + + N D P F ++ + +L++ G+ + I+ A
Sbjct: 214 KAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFV 273
Query: 239 KKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271
E+I+N HV +E P N V F
Sbjct: 274 PDIEAEVIKNAGHVLSMEQPTYVNERVMRFFNA 306
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 7e-42
Identities = 48/244 (19%), Positives = 100/244 (40%), Gaps = 30/244 (12%)
Query: 55 PSLVLIHGFGP--EAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLG 112
++LIHG G E+ WR + A H+ V D++ FG + I+ T+ + L
Sbjct: 37 QPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLH 96
Query: 113 KLLEKIGVE-RFSVVGTSYGGFVAYHMARMWPERVEKVV-IASSGVNMKRGDNEALV--- 167
++ + + + S+VG S GG ++ + E V +V + S+G+ ++ ++ +
Sbjct: 97 DFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINY 156
Query: 168 --KRANLERI------DHLMLPES------ASQLRTLTGLAVSKNLDIVPDFFFNDFVHD 213
R + + D + ++ T A + + + + +
Sbjct: 157 DFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPE 216
Query: 214 --------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIV 265
L+V G D++ P++ A + +L+ + II + H IE+P F +
Sbjct: 217 FIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI-DDSWGYIIPHCGHWAMIEHPEDFANAT 275
Query: 266 KNFL 269
+FL
Sbjct: 276 LSFL 279
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 2e-41
Identities = 55/251 (21%), Positives = 95/251 (37%), Gaps = 37/251 (14%)
Query: 55 PSLVLIHGFGPEA-IWQ-WRKQVQ-FFAPHFNVYVPDLIFFGHSTTRSIQRTEL-FQAAS 110
++VL+HG GP A W + + + + V + D +G S + + A
Sbjct: 37 ETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARI 96
Query: 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVV-IASSGVNMKRGDNE----- 164
L +++++ + + ++G S GG + WPERV K+V + M
Sbjct: 97 LKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGI 156
Query: 165 ----ALVKRANLERI---------DHLMLPESASQLRTLTGLAVSKNLDIV------PDF 205
L ++ +E + D L ++ + R L+ +L+
Sbjct: 157 KRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPK 216
Query: 206 FFNDFVHD-------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP 258
F DF LIVWG D+ P+ L + + L I + H Q E+
Sbjct: 217 QFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGI-AGSELHIFRDCGHWAQWEHA 275
Query: 259 GLFNSIVKNFL 269
FN +V NFL
Sbjct: 276 DAFNQLVLNFL 286
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 4e-41
Identities = 41/252 (16%), Positives = 95/252 (37%), Gaps = 38/252 (15%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTEL-FQAASLG 112
LV +HGF ++ + ++ F +++V DL G + + + L
Sbjct: 16 NQVLVFLHGFLSDS-RTYHNHIEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITTLLD 74
Query: 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL 172
++L+K + ++ G S GG VA + A + +++ S+ +K N+ + +
Sbjct: 75 RILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDD 134
Query: 173 ERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHD------------------- 213
R L + + L + ++ +P +
Sbjct: 135 ARAKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTG 194
Query: 214 ---------------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP 258
LI+ G+ D+ F ++A ++ L+ ++ ++I T H +E+
Sbjct: 195 QMPNLWPRLKEIKVPTLILAGEYDEKFV-QIAKKMANLI-PNSKCKLISATGHTIHVEDS 252
Query: 259 GLFNSIVKNFLR 270
F++++ FL+
Sbjct: 253 DEFDTMILGFLK 264
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 7e-41
Identities = 44/264 (16%), Positives = 97/264 (36%), Gaps = 29/264 (10%)
Query: 25 LSSQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH- 81
++S + ++ LH+ G +++L+ G + Q++
Sbjct: 2 VTSAKVAVNG-VQLHYQQTGEG---------DHAVLLLPGMLGSGETDFGPQLKNLNKKL 51
Query: 82 FNVYVPDLIFFGHSTTRSIQRTELF---QAASLGKLLEKIGVERFSVVGTSYGGFVAYHM 138
F V D +GHS F A L++ + ++ S++G S GG A
Sbjct: 52 FTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIA 111
Query: 139 ARMWPERVEKVVIASSGVNMKRGDNEALVKRANLER--------IDHLMLPESASQLRTL 190
A +P + K+VI + + D+ ++ + ++ L + ++
Sbjct: 112 AAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEK 171
Query: 191 TGLAVSKNLDIVPDFFFNDFVHD----VLIVWGDQDQIFPLKMATELKELLGKKARLEII 246
+ + + + LIV G++D + P A + + + K +RL ++
Sbjct: 172 WVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHV-KGSRLHLM 230
Query: 247 ENTSHVPQIENPGLFNSIVKNFLR 270
H + FN + ++FL+
Sbjct: 231 PEGKHNLHLRFADEFNKLAEDFLQ 254
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 2e-38
Identities = 40/235 (17%), Positives = 85/235 (36%), Gaps = 22/235 (9%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQ---AA 109
+L+ +HG G + + ++ +N + DL G S + + A
Sbjct: 15 SPNTLLFVHGSGCNLKI-FGELEKYLE-DYNCILLDLKGHGESKGQCPSTVYGYIDNVAN 72
Query: 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169
+ + +++G S GG + +A V KVV S G + D + + K
Sbjct: 73 FITNSEVTKHQKNITLIGYSMGGAIVLGVALKKLPNVRKVVSLSGGARFDKLDKDFMEKI 132
Query: 170 ANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV---------------HDV 214
+ + ++ +L L+ + L+ PD ND + V
Sbjct: 133 YHNQLDNNYLLECIGGIDNPLSEKYF-ETLEKDPDIMINDLIACKLIDLVDNLKNIDIPV 191
Query: 215 LIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFL 269
+ + + ++ + +K+ + + + L+I E H + N +KNF+
Sbjct: 192 KAIVAKDELLTLVEYSEIIKKEV-ENSELKIFETGKHFLLVVNAKGVAEEIKNFI 245
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 2e-37
Identities = 52/249 (20%), Positives = 94/249 (37%), Gaps = 39/249 (15%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGK 113
LVL+HG+G A WR + + HF +++ DL FG S + A + +
Sbjct: 13 NVHLVLLHGWGLNA-EVWRCIDEELSSHFTLHLVDLPGFGRS-----RGFGALSLADMAE 66
Query: 114 LLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVV-IASSGVNMKRGDNEALVK---- 168
+ + ++ +G S GG VA +A PERV +V +ASS R + +
Sbjct: 67 AVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLA 126
Query: 169 ----------RANLERIDHLMLPESASQLRTLTGL-------------AVSKNLDIVPDF 205
+ +ER L + + + L ++ L+I+
Sbjct: 127 GFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTV 186
Query: 206 FFNDFVHD----VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLF 261
+ + L ++G D + P K+ L +L + I +H P I +P F
Sbjct: 187 DLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEF 245
Query: 262 NSIVKNFLR 270
++ +
Sbjct: 246 CHLLVALKQ 254
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 3e-36
Identities = 46/250 (18%), Positives = 89/250 (35%), Gaps = 36/250 (14%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQ----AAS 110
+++L HGFG + WR + F V V D + G S S A
Sbjct: 29 KTVLLAHGFGCDQ-NMWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKD 87
Query: 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVV-IASSGVNM-KRGDNEALVK 168
+ ++L + + S++G S +A + +R+ + I S M D +
Sbjct: 88 VEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFE 147
Query: 169 RANLERIDHLMLPESASQLRTLTGLAVSKN---------------------LDIVPDFFF 207
R +LE + +LM L L + + FF
Sbjct: 148 RDDLEELINLMDKNYIGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVAKTFAKATFF 207
Query: 208 NDFVHD-------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGL 260
+D+ LI +D + ++ + E + ++LE+I+ H + + GL
Sbjct: 208 SDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENI-PNSQLELIQAEGHCLHMTDAGL 266
Query: 261 FNSIVKNFLR 270
++ +F++
Sbjct: 267 ITPLLIHFIQ 276
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 5e-36
Identities = 58/267 (21%), Positives = 101/267 (37%), Gaps = 52/267 (19%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTT-RSIQRTELFQAASLG 112
+++L+HG A W + + A + V D + F S+ Q + AA+
Sbjct: 47 RTILLMHGKNFCA-GTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTH 105
Query: 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG--VNMKRGDN------- 163
LLE++GV R SV+G S GG +A A ++P +VE++V+ + + K
Sbjct: 106 ALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDD 165
Query: 164 ----------EALVKRANLERIDHLMLPESASQLRTLTGL-------AVSKNLDIVPDFF 206
E + + PE ++ G+ +V+ N + D
Sbjct: 166 WYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMI 225
Query: 207 FN-DFVHD-------VLIVWGDQDQIFPLKMATELKEL--------LGKK-------ARL 243
F V++ L++ G++D K A + LGK A L
Sbjct: 226 FTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATL 285
Query: 244 EIIENTSHVPQIENPGLFNSIVKNFLR 270
+ H PQI+ P F+ + L+
Sbjct: 286 VEFPDLGHTPQIQAPERFHQALLEGLQ 312
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 1e-35
Identities = 46/256 (17%), Positives = 78/256 (30%), Gaps = 46/256 (17%)
Query: 57 LVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHST---TRSIQRTELFQAASLGK 113
L + H + E F H++VY+ +L G+S S L
Sbjct: 26 LCVTHLY-SEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTET-IKDLEA 83
Query: 114 LLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG------------------ 155
+ E + + ++ G S GG +A A E + K+++ +
Sbjct: 84 IREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNV 143
Query: 156 -VNMKRGDNEALVKRANLERIDHLMLPESASQL--------RTLTGLAVSKNLDIVPDFF 206
N AL + ++ + E A L K + ++F
Sbjct: 144 KFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYF 203
Query: 207 FNDFVHD-------------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVP 253
D I G D P + E+ L+ A L E ++H P
Sbjct: 204 RQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLI-PNATLTKFEESNHNP 262
Query: 254 QIENPGLFNSIVKNFL 269
+E FN V + L
Sbjct: 263 FVEEIDKFNQFVNDTL 278
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 2e-35
Identities = 41/252 (16%), Positives = 79/252 (31%), Gaps = 36/252 (14%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQ----AA 109
K S++ GFG + W F V + D + GHS R+ A
Sbjct: 20 KASIMFAPGFGCDQ-SVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQ 78
Query: 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVV-IASSGVNM-KRGDNEALV 167
+ + E + ++ VG S G + + PE +V + S + +
Sbjct: 79 DVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGF 138
Query: 168 KRANLERIDHLMLPESASQLRTLTGLAVSKN---------------------LDIVPDFF 206
+ L + +M +++ F
Sbjct: 139 EEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAF 198
Query: 207 FNDFVHD-------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPG 259
F+D D LI+ D I P + + + L + L+ +E H P + +P
Sbjct: 199 FSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHL-PYSSLKQMEARGHCPHMSHPD 257
Query: 260 LFNSIVKNFLRG 271
++ ++L+
Sbjct: 258 ETIQLIGDYLKA 269
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 6e-35
Identities = 45/250 (18%), Positives = 79/250 (31%), Gaps = 39/250 (15%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHST-----TRSIQRTELFQAA 109
P +VLI G G W Q+ + V D G++ SI + AA
Sbjct: 16 PVVVLISGLGGSG-SYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQ----MAA 70
Query: 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169
L + L G+E ++VVG + G V +A +P V ++ + + + R
Sbjct: 71 ELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVR 130
Query: 170 ANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHD---------------- 213
L A L ++ + H
Sbjct: 131 ERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRA 190
Query: 214 ------------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLF 261
V I+ D + P ++EL L ++ ++ H + +P F
Sbjct: 191 DFSHHADRIRCPVQIICASDDLLVPTACSSELHAAL-PDSQKMVMPYGGHACNVTDPETF 249
Query: 262 NSIVKNFLRG 271
N+++ N L
Sbjct: 250 NALLLNGLAS 259
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 6e-35
Identities = 44/285 (15%), Positives = 78/285 (27%), Gaps = 48/285 (16%)
Query: 21 ASAGLSSQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFF 78
AS S+ +DI TL+ G P ++ HG + +
Sbjct: 44 ASDHFISRRVDIGR-ITLNVREKG----------SGPLMLFFHGI-TSNSAVFEPLMIRL 91
Query: 79 APHFNVYVPDLIFFGHST-TRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYH 137
+ F D G S + + A + L+ + +VG S G +
Sbjct: 92 SDRFTTIAVDQRGHGLSDKPETGYEANDY-ADDIAGLIRTLARGHAILVGHSLGARNSVT 150
Query: 138 MARMWPERVEKVVIASSG-----------VNMKRGDNEALVKRANLERIDHLMLPESASQ 186
A +P+ V VV ++ +E P +
Sbjct: 151 AAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIKAVEAYLAGRYPNIPAD 210
Query: 187 L-------------RTLTGLAVSKNLDIVPDFFFNDFVHD-------VLIVWGDQDQIFP 226
L LA S + +D V VLIV G+ ++
Sbjct: 211 AIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVS 270
Query: 227 LKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271
+ L + ++ H +P + + NF+
Sbjct: 271 AAALAKTSRLR-PDLPVVVVPGADHYVNEVSPEITLKAITNFIDA 314
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 5e-34
Identities = 40/246 (16%), Positives = 85/246 (34%), Gaps = 31/246 (12%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKL 114
P+++L+ G+ ++ +Q F V VP+ G S + Q ++
Sbjct: 28 PAILLLPGW-CHDHRVYKYLIQELDADFRVIVPNWRGHGLSPSEVPDFGYQEQVKDALEI 86
Query: 115 LEKIGVERFSVVGTSYGGFVAYHMA-RMWPERVEKVVIASSGVN---------------- 157
L+++GVE F V S+GG+V + + PER + +I +
Sbjct: 87 LDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDP 146
Query: 158 -----MKRGDNEALVKRANLERIDHLMLPESASQ-----LRTLTGLAVSKNLDIVPDFFF 207
G + + + +R+ H +L E A R+ + + + P
Sbjct: 147 ERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMM 206
Query: 208 NDFVHD--VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIV 265
+ + ++ + K+ ++ E + +H P I+ P +
Sbjct: 207 ANLTKTRPIRHIFSQPTEPEYEKINSDFAEQH-PWFSYAKLGGPTHFPAIDVPDRAAVHI 265
Query: 266 KNFLRG 271
+ F
Sbjct: 266 REFATA 271
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 3e-32
Identities = 44/257 (17%), Positives = 80/257 (31%), Gaps = 57/257 (22%)
Query: 21 ASAGLSSQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQF 77
AS TI + L F P + S++L+HG + WQ +
Sbjct: 3 ASVEQREGTIQVQG-QALFFREALPGSGQA-----RFSVLLLHGIRFSSETWQNLGTLHR 56
Query: 78 FAPH-FNVYVPDLIFFGHSTTRSIQR--TELFQAASLGKLLEKIGVERFSVVGTSYGGFV 134
A + DL GHS + EL + L +++ + + V+ S G
Sbjct: 57 LAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMY 116
Query: 135 AYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLA 194
+ ++ V +
Sbjct: 117 SLPFLTAPGSQLPGFVPVAPI--------------------------------------- 137
Query: 195 VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQ 254
D + + LIV+GDQD + LK+L R+ I++ H
Sbjct: 138 ---CTDKINAANYASVKTPALIVYGDQDPMGQTSFE-HLKQL--PNHRVLIMKGAGHPCY 191
Query: 255 IENPGLFNSIVKNFLRG 271
++ P +++ + +FL+G
Sbjct: 192 LDKPEEWHTGLLDFLQG 208
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 1e-31
Identities = 53/256 (20%), Positives = 89/256 (34%), Gaps = 41/256 (16%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHST-TRSIQRTELFQAASLG 112
+V HG+ P W Q+ F A + V D G S+ S + + A L
Sbjct: 20 QPIVFSHGW-PLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTY-ADDLA 77
Query: 113 KLLEKIGVERFSVVGTSYGGFVAYH-MARMWPERVEKVVIASSG--VNMKRGDNEALVKR 169
+L+E + + + G S GG + R RV K + S+ + +K N +
Sbjct: 78 QLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPM 137
Query: 170 ANLERIDHLMLPESASQLRTLT-------------------------GLAVSKN--LDIV 202
+ I L + + + L G+A D +
Sbjct: 138 EVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCI 197
Query: 203 PDFFFNDFVHD-------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255
F DF D L+V GD DQ+ P++ + L K + L+I H
Sbjct: 198 KAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTD 257
Query: 256 ENPGLFNSIVKNFLRG 271
+ N+ + F++G
Sbjct: 258 THKDQLNADLLAFIKG 273
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 3e-30
Identities = 56/255 (21%), Positives = 97/255 (38%), Gaps = 41/255 (16%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ-AASLG 112
+VLIHG+ P + W QV + V D FG S+ + + E + L
Sbjct: 28 KPVVLIHGW-PLSGRSWEYQVPALVEAGYRVITYDRRGFGKSS-QPWEGYEYDTFTSDLH 85
Query: 113 KLLEKIGVERFSVVGTSYGGFVAYH-MARMWPERVEKVVIASS--GVNMKRGDN-EALVK 168
+LLE++ ++ ++VG S GG ++ +R+EKVV A + K D+ E +
Sbjct: 86 QLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALD 145
Query: 169 RANLERIDHLMLPESASQLRTLTGLAVSKN--------------------------LDIV 202
A +E ++ + + L T + LD +
Sbjct: 146 DATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCI 205
Query: 203 PDFFFNDFVHD-------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255
F DF D LI+ GD D P + + +L +++ +I+ H
Sbjct: 206 TAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNA 265
Query: 256 ENPGLFNSIVKNFLR 270
+ FN + FL+
Sbjct: 266 THAKEFNEALLLFLK 280
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 5e-30
Identities = 46/285 (16%), Positives = 80/285 (28%), Gaps = 57/285 (20%)
Query: 26 SSQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFG-PEAIWQWRKQVQFFAPHF 82
+ + L + G +V I G G W + F A +
Sbjct: 24 GAMDPEFRV-INLAYDDNGTG----------DPVVFIAGRGGAGRTWHPHQVPAFLAAGY 72
Query: 83 NVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW 142
D G + T+ A L+E + + VVG S G F+A + +
Sbjct: 73 RCITFDNRGIGATENAEGFTTQTM-VADTAALIETLDIAPARVVGVSMGAFIAQELMVVA 131
Query: 143 PERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTL------------ 190
PE V V+ ++ + +A E D + R
Sbjct: 132 PELVSSAVLMATRGRL--DRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLND 189
Query: 191 -----------------TGLAVSKNLDIVPDFFFNDFVHD-------VLIVWGDQDQIFP 226
+ + LD P + + VL++ D + P
Sbjct: 190 DVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQT---NRLPAYRNIAAPVLVIGFADDVVTP 246
Query: 227 LKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271
+ E+ + L R I + H+ E P N+ + F
Sbjct: 247 PYLGREVADAL-PNGRYLQIPDAGHLGFFERPEAVNTAMLKFFAS 290
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 7e-30
Identities = 50/253 (19%), Positives = 93/253 (36%), Gaps = 39/253 (15%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHST-TRSIQRTELFQAASLG 112
++ HG+ +A W Q+++ + + D FG S + + F A +
Sbjct: 20 KPVLFSHGWLLDA-DMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTF-ADDIA 77
Query: 113 KLLEKIGVERFSVVGTSYGGFVAYH-MARMWPERVEKVVIASS--GVNMKRGDNEALVKR 169
+L+E + ++ ++VG S GG +AR RV +V+ + + ++ D V
Sbjct: 78 QLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPL 137
Query: 170 ANLERIDHLMLPESASQLRTLTGLAVSKN-------------------------LDIVPD 204
R +L + A + N +D V
Sbjct: 138 DVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTA 197
Query: 205 FFFNDFVHD-------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIEN 257
F DF D L++ GD DQI P + ++ L K A L++ ++ H + +
Sbjct: 198 FAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTH 257
Query: 258 PGLFNSIVKNFLR 270
N + FL+
Sbjct: 258 AQQLNEDLLAFLK 270
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 1e-29
Identities = 51/257 (19%), Positives = 86/257 (33%), Gaps = 62/257 (24%)
Query: 24 GLSSQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQF--FA 79
L + ID++ T + + S+ L HG+ W K F ++
Sbjct: 3 ALQEEFIDVNG-TRVFQRKMVTDSN-------RRSIALFHGY-SFTSMDWDKADLFNNYS 53
Query: 80 PH-FNVYVPDLIFFGHSTTRSIQRTELFQ----AASLGKLLEKIGVERFSVVGTSYGGFV 134
+NVY PD FG S + + A + L+ GV R ++G S GG +
Sbjct: 54 KIGYNVYAPDYPGFGRSASSEKYGIDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGM 113
Query: 135 AYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLA 194
+P+ V+ ++ +
Sbjct: 114 VIMTTLQYPDIVDGIIAVAPAWVES----------------------------------- 138
Query: 195 VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQ 254
L+VWG +D + P+ ++ E ++ +RLEI+E + H
Sbjct: 139 --------LKGDMKKIRQKTLLVWGSKDHVVPIALSKEYASII-SGSRLEIVEGSGHPVY 189
Query: 255 IENPGLFNSIVKNFLRG 271
IE P F I +FLR
Sbjct: 190 IEKPEEFVRITVDFLRN 206
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 1e-29
Identities = 64/283 (22%), Positives = 100/283 (35%), Gaps = 51/283 (18%)
Query: 29 TIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVY 85
T+ D T + + WGP+ +V HG+ P + W Q+ FF H + V
Sbjct: 2 TVTTSDGTNIFYKDWGPR--------DGLPVVFHHGW-PLSADDWDNQMLFFLSHGYRVI 52
Query: 86 VPDLIFFGHST-TRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGG-FVAYHMARMWP 143
D G S + + + AA + L E + + +G S GG VA ++AR P
Sbjct: 53 AHDRRGHGRSDQPSTGHDMDTY-AADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEP 111
Query: 144 ERVEKVVIASS--GVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLT---------- 191
RV K V+ S+ V +K N + + + A +
Sbjct: 112 GRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNRE 171
Query: 192 GLAVSKNL-----------------DIVPDFFFNDFVHD-------VLIVWGDQDQIFPL 227
G VS+ L + + F DF D VL+ G DQ+ P
Sbjct: 172 GATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPY 231
Query: 228 KMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
A L A L+ E H +P + N + F++
Sbjct: 232 ADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 6e-29
Identities = 51/292 (17%), Positives = 90/292 (30%), Gaps = 58/292 (19%)
Query: 27 SQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNV 84
+++ +H+ GP+ ++ +HG P + + WR + AP
Sbjct: 12 PHYVEVLG-ERMHYVDVGPR--------DGTPVLFLHGN-PTSSYLWRNIIPHVAPSHRC 61
Query: 85 YVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE 144
PDLI G S + L +E +G+E +V +G + +H A+ PE
Sbjct: 62 IAPDLIGMGKSDKPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPE 121
Query: 145 RVEKVVIASSGVNMKRGDN------EALVKRANLERIDHLMLPESASQLRTLTGLAVSK- 197
RV+ + D E + L++ ++A L V
Sbjct: 122 RVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPL 181
Query: 198 ------------------------------------NLDIVPDF--FFNDFVHDVLIVWG 219
+ +V + + + L+ WG
Sbjct: 182 TEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWG 241
Query: 220 DQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271
+ P A L E L + I H Q +NP L S + +L
Sbjct: 242 TPGVLIPPAEAARLAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPA 292
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 7e-29
Identities = 57/274 (20%), Positives = 95/274 (34%), Gaps = 46/274 (16%)
Query: 28 QTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVY 85
++ T LH+ G + + P +VL + G + W QV + HF V
Sbjct: 5 PYAAVNG-TELHYRIDGERHGN------APWIVLSNSLGTDL-SMWAPQVAALSKHFRVL 56
Query: 86 VPDLIFFGHSTTRSIQRT-ELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE 144
D GHS T E + L++ + + R + G S GG +A +
Sbjct: 57 RYDTRGHGHSEAPKGPYTIEQL-TGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHAD 115
Query: 145 RVEKVVIASSGVNMKRGDNEALVKRANLER-------IDHLML-----------PESASQ 186
R+E+V + ++ + G E V RA R D ++ P +
Sbjct: 116 RIERVALCNTAA--RIGSPEVWVPRAVKARTEGMHALADAVLPRWFTADYMEREPVVLAM 173
Query: 187 LRTL------TGLAVSKNLDIVPDFFFNDFVHD----VLIVWGDQDQIFPLKMATELKEL 236
+R + G A N + + L++ G D EL +
Sbjct: 174 IRDVFVHTDKEGYA--SNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQA 231
Query: 237 LGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
+ AR ++ SH+ IE F V +FL
Sbjct: 232 IA-GARYVELD-ASHISNIERADAFTKTVVDFLT 263
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 2e-28
Identities = 47/257 (18%), Positives = 81/257 (31%), Gaps = 47/257 (18%)
Query: 55 PSLVLIHGFGPEAIWQ-WRKQVQFFAPHFNVYVPDLIFFGHST----TRSIQRTELFQAA 109
P+L ++HG GP R+ +Q + F V D G S + +
Sbjct: 26 PALFVLHG-GPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDPRLFTVDAL-VE 83
Query: 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169
L E +GVERF ++ +G VA + R +P+ +++A L +
Sbjct: 84 DTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQAEGAILLA--PWVNFPWLAARLAEA 141
Query: 170 ANLERI--------------------DHLMLPESASQLRT--LTGLAVSKNLDIVPDFFF 207
A L + D LM P ++ L A D F
Sbjct: 142 AGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFL 201
Query: 208 NDFVHD-------------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQ 254
+ + + ++ G++D L +A + ++ H
Sbjct: 202 RNGLWRLDYTPYLTPERRPLYVLVGERDGTSYPYAEEVASRL---RAPIRVLPEAGHYLW 258
Query: 255 IENPGLFNSIVKNFLRG 271
I+ P F K L
Sbjct: 259 IDAPEAFEEAFKEALAA 275
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 4e-28
Identities = 55/299 (18%), Positives = 99/299 (33%), Gaps = 61/299 (20%)
Query: 26 SSQTIDIDD-ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH--F 82
SS+T+ D ET + ++ + P L+++HG GP + + A
Sbjct: 29 SSRTVPFGDHETWVQVTT---PENAQPHALP-LIVLHG-GPGMAHNYVANIAALADETGR 83
Query: 83 NVYVPDLIFFGHSTTRSIQRTELF----QAASLGKLLEKIGVERFSVVGTSYGGFVAYHM 138
V D + G+ST + + + +G+ER+ V+G S+GG + +
Sbjct: 84 TVIHYDQVGCGNSTHLPDAPADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEI 143
Query: 139 ARMWPERVEKVVIASSGVNMK--------------RGDNEALVKRANLERIDHLMLPESA 184
A P + + I +S +M+ AL + I H ++A
Sbjct: 144 AVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAA 203
Query: 185 SQLRTLTGLAVSKNLDIVPDFF---------------FNDFVHD---------------- 213
++ V D N+F
Sbjct: 204 AEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVT 263
Query: 214 --VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
VL++ G+ D+ P + + R + TSH +E P F ++V FL
Sbjct: 264 APVLVIAGEHDEATPK-TWQPFVDHI-PDVRSHVFPGTSHCTHLEKPEEFRAVVAQFLH 320
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 4e-28
Identities = 48/254 (18%), Positives = 87/254 (34%), Gaps = 41/254 (16%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHST-TRSIQRTELFQAASLG 112
+VLIHGF P + W +Q + V D FG S+ + + F AA L
Sbjct: 24 QPVVLIHGF-PLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTF-AADLN 81
Query: 113 KLLEKIGVERFSVVGTSYGGF-VAYHMARMWPERVEKVVIASS--GVNMKRGDN-EALVK 168
+LE + ++ +VG S G VA +++ R+ KV +S +K DN +
Sbjct: 82 TVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAP 141
Query: 169 RANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDF----------------------- 205
+ + I + + + + + ++
Sbjct: 142 QEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAA 201
Query: 206 ---FFNDFVHD-------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255
++ DF D LI+ G D+ P++ + A +E H
Sbjct: 202 PTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLW 261
Query: 256 ENPGLFNSIVKNFL 269
+ N+ + FL
Sbjct: 262 THAEEVNTALLAFL 275
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 5e-28
Identities = 36/257 (14%), Positives = 71/257 (27%), Gaps = 30/257 (11%)
Query: 38 LHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTT 97
L+ + + +VL+HG + N+ D+ G S
Sbjct: 3 LNI---RAQTAQNQHNNSPIVLVHGLFGSLDN-LGVLARDLVNDHNIIQVDVRNHGLSPR 58
Query: 98 RSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG-- 155
+ A L L+ + +++ + +G S GG + + P+R++K+V
Sbjct: 59 EPVMNYPAM-AQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPV 117
Query: 156 -----------VNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGL----------A 194
+ R I L E L
Sbjct: 118 DYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPV 177
Query: 195 VSKNLDIVPDF-FFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVP 253
+ + + + H L + G + +L +AR +I H
Sbjct: 178 LWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF-PQARAHVIAGAGHWV 236
Query: 254 QIENPGLFNSIVKNFLR 270
E P ++ +L
Sbjct: 237 HAEKPDAVLRAIRRYLN 253
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 1e-27
Identities = 52/255 (20%), Positives = 90/255 (35%), Gaps = 45/255 (17%)
Query: 57 LVLIHGFGPEAIWQWRKQVQFF-APHFNVYVPDLIFFGHST-TRSIQRTELFQAASLGKL 114
+VLIHG+ + W +Q + A + V D FG S+ + + F AA L +
Sbjct: 26 VVLIHGYPLDG-HSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTF-AADLHTV 83
Query: 115 LEKIGVERFSVVGTSYGGFVAYH-MARMWPERVEKVVIASSG--VNMKRGDNEALVKRAN 171
LE + + +VG S G +AR ERV K+ +S ++R DN V +
Sbjct: 84 LETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEV 143
Query: 172 LERIDHLMLPESASQLRTLTGLAVSKNLDIVPDF-------------------------- 205
+ I+ + + + + ++
Sbjct: 144 FDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPA 203
Query: 206 FFNDFVHD----------VLIVWGDQDQIFPLK-MATELKELLGKKARLEIIENTSHVPQ 254
+ DF D LI+ G +D I P+ A + + +A +E H
Sbjct: 204 WIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAV-PEADYVEVEGAPHGLL 262
Query: 255 IENPGLFNSIVKNFL 269
+ N+ +K FL
Sbjct: 263 WTHADEVNAALKTFL 277
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 1e-27
Identities = 47/255 (18%), Positives = 86/255 (33%), Gaps = 41/255 (16%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHST-TRSIQRTELFQAASLG 112
+VLIHGF P + W +Q + V D FG S+ + + F AA L
Sbjct: 25 VPVVLIHGF-PLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTF-AADLN 82
Query: 113 KLLEKIGVERFSVVGTSYGGF-VAYHMARMWPERVEKVVIASS--GVNMKRGDN-EALVK 168
+LE + ++ +VG S G VA +++ R+ V +S +K DN +
Sbjct: 83 TVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAP 142
Query: 169 RANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDF----------------------- 205
+ + I + + + + + ++
Sbjct: 143 QEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAA 202
Query: 206 ---FFNDFVHD-------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255
++ DF D LI+ G D+ P++ + A +E H
Sbjct: 203 PTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLW 262
Query: 256 ENPGLFNSIVKNFLR 270
+ N+ + FL
Sbjct: 263 THAEEVNTALLAFLA 277
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 1e-27
Identities = 54/283 (19%), Positives = 100/283 (35%), Gaps = 51/283 (18%)
Query: 29 TIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVY 85
+ D + + WGP+ P + HG+ P + W Q+ FF H + V
Sbjct: 3 YVTTKDGVQIFYKDWGPR--------DAPVIHFHHGW-PLSADDWDAQLLFFLAHGYRVV 53
Query: 86 VPDLIFFGHST-TRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE 144
D G S+ + + A + ++ +G++ VG S GG PE
Sbjct: 54 AHDRRGHGRSSQVWDGHDMDHY-ADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPE 112
Query: 145 -RVEKVVIASSG--VNMKRGDNEALVKRANLERIDHLMLPESASQLRTLT---------- 191
+V K V+ ++ + ++ N + ++ + + A R +
Sbjct: 113 DKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRP 172
Query: 192 GLAVSK-----------------NLDIVPDFFFNDFVHD-------VLIVWGDQDQIFPL 227
G+ S+ + D + F DF D VL++ GD DQI P
Sbjct: 173 GVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPY 232
Query: 228 KMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
+ + L L L+ + H + + N+ + F+R
Sbjct: 233 ENSGVLSAKLLPNGALKTYKGYPHGMPTTHADVINADLLAFIR 275
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 2e-27
Identities = 56/285 (19%), Positives = 95/285 (33%), Gaps = 56/285 (19%)
Query: 29 TIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVY 85
D + + WG +V IHG+ W+ Q++ +
Sbjct: 2 ICTTRDGVEIFYKDWGQG----------RPVVFIHGWPLNG-DAWQDQLKAVVDAGYRGI 50
Query: 86 VPDLIFFGHST-TRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYH-MARMWP 143
D GHST + F A L LL + + ++V S GG + R
Sbjct: 51 AHDRRGHGHSTPVWDGYDFDTF-ADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGT 109
Query: 144 ERVEKVVIASSG--VNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKN--- 198
R+ V+ S+ V +K N V + + + +L E + + S N
Sbjct: 110 GRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPG 169
Query: 199 -----------------------LDIVPDFFFNDFVHD-------VLIVWGDQDQIFPLK 228
+ V F + DF D L+V GD DQ+ P+
Sbjct: 170 NKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPID 229
Query: 229 -MATELKELLGKKARLEIIENTSHVPQI--ENPGLFNSIVKNFLR 270
+ +++ A L++ E +SH + + FN + FL
Sbjct: 230 ATGRKSAQII-PNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 105 bits (262), Expect = 6e-27
Identities = 29/250 (11%), Positives = 62/250 (24%), Gaps = 38/250 (15%)
Query: 54 KPSLVLIHGFG-PEAIWQWRKQVQFFAPHFNVYVPDLIFFGHST-TRSIQRTELFQAASL 111
P V + G G + + + D G+S + ++
Sbjct: 41 NPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQANVGLRDWVNAI 100
Query: 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV--NMKRGDNEALVKR 169
+ E + + + S GGF A + + + + G + L +
Sbjct: 101 LMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQ 160
Query: 170 ANLERIDHLMLPESASQLRTLTGLAVSK----------------------------NLDI 201
L R + + L+ L+ S L +
Sbjct: 161 LALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLAL 220
Query: 202 VPDFFFNDFVHD--VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPG 259
+ F ++ + L+ +E + +L I+ H
Sbjct: 221 GEEDFKTGISEKIPSIVFSESFREKEYLE--SEYLNKH-TQTKL-ILCGQHHYLHWSETN 276
Query: 260 LFNSIVKNFL 269
V+ L
Sbjct: 277 SILEKVEQLL 286
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 8e-27
Identities = 51/249 (20%), Positives = 86/249 (34%), Gaps = 40/249 (16%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHST----TRSIQRTELFQAA 109
KP L L + G + W Q+ HF V D G S+ ++ R
Sbjct: 27 KPLLALSNSIG-TTLHMWDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLAR----LGE 81
Query: 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169
+ +LL+ + V R +G S GG V +A P+R+E++V+A++ G +R
Sbjct: 82 DVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSA--WLGPAAQWDER 139
Query: 170 ANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV----------------HD 213
M +A L A+ + + V + F + D
Sbjct: 140 IAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTD 199
Query: 214 -----------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFN 262
L++ G D + + + ARL + H+ +E P F
Sbjct: 200 LRAQLARIERPTLVIAGAYDTVTAASHGELIAASIA-GARLVTLP-AVHLSNVEFPQAFE 257
Query: 263 SIVKNFLRG 271
V +FL
Sbjct: 258 GAVLSFLGA 266
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 8e-26
Identities = 43/248 (17%), Positives = 70/248 (28%), Gaps = 42/248 (16%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKL 114
P +VL+ G + APHF V D G S E L +
Sbjct: 24 PPVVLVGGALSTR-AGGAPLAERLAPHFTVICYDRRGRGDSGDTPPYAVERE-IEDLAAI 81
Query: 115 LEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLER 174
++ G F V G S G ++ A V D+ V R
Sbjct: 82 IDAAGGAAF-VFGMSSGAGLSLLAAASGLPITRLAVFEPPYA---VDDSRPPVPPDYQTR 137
Query: 175 IDHLML-------------------PESASQLR------TLTGLAVSKNLDIVPDFFFND 209
+D L+ P+ +Q++ + +A + D
Sbjct: 138 LDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTI 197
Query: 210 FVHD-------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFN 262
L++ G + A EL + + AR +EN +H P
Sbjct: 198 PTARFASISIPTLVMDGGASPAWIRHTAQELADTI-PNARYVTLENQTHTVA---PDAIA 253
Query: 263 SIVKNFLR 270
++ F
Sbjct: 254 PVLVEFFT 261
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 1e-25
Identities = 44/267 (16%), Positives = 90/267 (33%), Gaps = 54/267 (20%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHST--TRSIQRTELFQAAS 110
K L+ +HG GP + ++ V D G S +S +
Sbjct: 28 KAKLMTMHG-GPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYG-VEE 85
Query: 111 LGKLLEKI-GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK---------- 159
L K+ G E+ ++G+SYGG +A A + + ++ ++++ ++
Sbjct: 86 AEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLI 145
Query: 160 ----------------RGDNE-----ALVKRANLERIDHL--MLPESASQLRTLTGLAVS 196
G E V + + PE L V
Sbjct: 146 DELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVY 205
Query: 197 KNLDIVPDFFFNDFVHD-------------VLIVWGDQDQIFPLKMATELKELLGKKARL 243
+ ++ +F + D LI G+ D++ P +A + E + + L
Sbjct: 206 RIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NVARVIHEKI-AGSEL 263
Query: 244 EIIENTSHVPQIENPGLFNSIVKNFLR 270
+ + SH+ E+ +N ++ +F+
Sbjct: 264 HVFRDCSHLTMWEDREGYNKLLSDFIL 290
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 98.3 bits (245), Expect = 1e-24
Identities = 42/273 (15%), Positives = 85/273 (31%), Gaps = 39/273 (14%)
Query: 28 QTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVY 85
Q+++++ T + + G P+L L+ G+ + ++ A F+V
Sbjct: 2 QSLNVNG-TLMTYSESGDP--------HAPTLFLLSGW-CQDHRLFKNLAPLLARDFHVI 51
Query: 86 VPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMA-RMWPE 144
PD T S A L ++ G+ F +V TS+G +V + ++
Sbjct: 52 CPDWRGHDAKQTDSGDFDSQTLAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAA 111
Query: 145 RVEKVVIASSGVNMKRGDNEALVKRANLER---------------------IDHL--MLP 181
R+ K +I + G + L + + ++HL +P
Sbjct: 112 RLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQSFFDEWAETTDNADVLNHLRNEMP 171
Query: 182 ESASQLRTLTGLAVSKN---LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG 238
++ + N D + + Q +
Sbjct: 172 WFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGH 231
Query: 239 KKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271
I +H P +ENP ++ FL+
Sbjct: 232 SWFHPRHIPGRTHFPSLENPVAVAQAIREFLQA 264
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 96.4 bits (240), Expect = 1e-23
Identities = 42/253 (16%), Positives = 87/253 (34%), Gaps = 39/253 (15%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFA-PHFNVYVPDLIFFGHST--TRSIQRTELFQAAS 110
+ + + +HG P + +RK + F V PDL FG S T T F S
Sbjct: 46 EHTFLCLHGE-PSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRS 104
Query: 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA 170
L L+ + +ER ++V +GG + + P+ V+++++ ++ + + +
Sbjct: 105 LLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWR 164
Query: 171 NLERIDHLMLPESASQLRTLTGLAVS----------------------KNLDIVPD---- 204
+ + L R + G+ + + I PD
Sbjct: 165 DFVA-NSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGA 223
Query: 205 --------FFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE 256
F+ + + G QD + ++ L++ + I+E H Q
Sbjct: 224 EIGRQAMSFWSTQWSGPTFMAVGAQDPVLGPEVMGMLRQAIRGCPEPMIVEAGGHFVQEH 283
Query: 257 NPGLFNSIVKNFL 269
+ + + F
Sbjct: 284 GEPIARAALAAFG 296
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 4e-22
Identities = 42/263 (15%), Positives = 80/263 (30%), Gaps = 47/263 (17%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFA-PHFNVYVPDLIFFGHST--TRSIQRTELFQAAS 110
+ + +HG P + +RK + FA V PD FG S T F
Sbjct: 47 EDVFLCLHGE-PTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNF 105
Query: 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR---------- 160
L L+E++ + ++V +GGF+ + P R ++++I ++ +
Sbjct: 106 LLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFV 165
Query: 161 --------------GDNEALVKRANLERIDHLMLPESASQLRT----------------- 189
L ++R + AS
Sbjct: 166 TQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKM 225
Query: 190 --LTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIE 247
A F+ ND+ + G +D++ + +K L+ I
Sbjct: 226 VAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIA 285
Query: 248 NTSHVPQIENPGLFNSIVKNFLR 270
+ H Q + +K+F
Sbjct: 286 DAGHFVQEFGEQVAREALKHFAE 308
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 4e-22
Identities = 50/272 (18%), Positives = 83/272 (30%), Gaps = 56/272 (20%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHST-TRSIQRTELF----QAA 109
P L+L+HGF P+ W + A F V V DL +G S S ++ + A
Sbjct: 34 PPLLLLHGF-PQTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPYTKRAMAK 92
Query: 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV------------- 156
L + +E++G F++ G + G V+Y +A P R+ K+ +
Sbjct: 93 QLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYA 152
Query: 157 ---------NMKRGDNEALVKRANLERIDHLMLPES-ASQLRTLTGLAVSKNLDIVPD-- 204
E L+ + + + A L AV D
Sbjct: 153 LKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPM 212
Query: 205 -----------FFFNDFVHD-------------VLIVWGDQDQIFPLKMATELKELLGKK 240
+ DF HD +L +WG ++
Sbjct: 213 RRHVMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASD 272
Query: 241 ARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272
+ IE + H E P + F +
Sbjct: 273 VQGAPIE-SGHFLPEEAPDQTAEALVRFFSAA 303
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 8e-22
Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 54/262 (20%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHS------TTRSIQRTELFQA 108
P ++ + G A + A + V P++ G S T +
Sbjct: 30 PPVLCLPGLTRNA-RDFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTYQPMQ----YL 84
Query: 109 ASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL-- 166
L LL + G+ERF +GTS GG + +A P R+ V+ G + E +
Sbjct: 85 QDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRG 144
Query: 167 -----------------VKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFND 209
++ ++ + + + + + L S + D +
Sbjct: 145 YVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAE 204
Query: 210 FVHD---------------------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIEN 248
+L++ G+ I + A ++ G L +
Sbjct: 205 PFEAPVGATPQVDMWPLFDALATRPLLVLRGETSDILSAQTAAKMASRPG--VELVTLPR 262
Query: 249 TSHVPQIENPGLFNSIVKNFLR 270
H P ++ P +I L
Sbjct: 263 IGHAPTLDEPESIAAIG-RLLE 283
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 87.5 bits (217), Expect = 2e-20
Identities = 37/267 (13%), Positives = 78/267 (29%), Gaps = 54/267 (20%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELF----QAA 109
++V HG P + + WR + + DLI G S S + + Q
Sbjct: 28 GDAIVFQHGN-PTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRYSYGEQRD 86
Query: 110 SLGKLLEKIGV-ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD--NEAL 166
L L + + + + +V +G + + A +RV+ + + V A+
Sbjct: 87 FLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAV 146
Query: 167 VKRANLER---IDHLMLPESASQLRTLTGLAVSK-------------------------- 197
R + + L + R L G + +
Sbjct: 147 RGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSW 206
Query: 198 ------------NLDIVPDF--FFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARL 243
+ +V ++ + + L + + I + +
Sbjct: 207 PRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAIIT-GRIRDYVRSW--PNQT 263
Query: 244 EIIENTSHVPQIENPGLFNSIVKNFLR 270
EI H Q ++P + + F+R
Sbjct: 264 EITVPGVHFVQEDSPEEIGAAIAQFVR 290
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 4e-20
Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 64/271 (23%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHS-------TTRSIQRTELFQ 107
P ++L+HGF + ++W + + A F V PDL G S + +
Sbjct: 31 PLVMLVHGF-GQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGYSGEQV------- 82
Query: 108 AASLGKLLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL 166
A L KL + +R F +V G + Y M + ++V + + R
Sbjct: 83 AVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPA 142
Query: 167 VKRANLERIDHLM-------LPE---SASQLRTLTGL--AVSKNLDIVPDFFFNDFVHD- 213
+ H L E + + L + + N ++ + + +
Sbjct: 143 FTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSY 202
Query: 214 ----------------------------------VLIVWGDQDQIFPLKMATELKELLGK 239
+ + G ++K +
Sbjct: 203 AKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTMTLAGGGAGGMGTFQLEQMKA-YAE 261
Query: 240 KARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
++ H E N +V +FL
Sbjct: 262 DVEGHVLPGCGHWLPEECAAPMNRLVIDFLS 292
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 6e-20
Identities = 37/256 (14%), Positives = 72/256 (28%), Gaps = 48/256 (18%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFA-PHFNVYVPDLIFFGHSTTRSIQRTELFQAASLG 112
P +VL+HG + W+ + A DL G + R +
Sbjct: 16 TPLVVLVHGLL-GSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEA-VEMIE 73
Query: 113 KLLE--KIGVERFSVVGTSYGGFVAYHMARMWPERVEKV---VIASSG---------VNM 158
+ ++ +VG S GG + H + +I
Sbjct: 74 QTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAAR 133
Query: 159 KRGDNEALVKRANLERIDHLM-----LPESASQLRTLTGLAVSKNLDIVPD--------- 204
+ D + +R + + I+H++ +S +++ +
Sbjct: 134 WQHD-QQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLAT 192
Query: 205 -----FFFNDFVH----DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255
+ + + V G+QD F +L E G + H
Sbjct: 193 SLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAESSG--LSYSQVAQAGHNVHH 245
Query: 256 ENPGLFNSIVKNFLRG 271
E P F IV+ +
Sbjct: 246 EQPQAFAKIVQAMIHS 261
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 7e-20
Identities = 44/269 (16%), Positives = 79/269 (29%), Gaps = 53/269 (19%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTT-RSIQRTELFQAASLGK 113
P+L+L+HGF P+ + W + A + V DL +G S+ + ++
Sbjct: 26 PALLLLHGF-PQNLHMWARVAPLLANEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMAS 84
Query: 114 ----LLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS---GVNMKRGDN--- 163
L+ +G ERF +VG + GG + MA P+ V + + V + D
Sbjct: 85 DQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVA 144
Query: 164 ----------------EALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDI--VPD- 204
E ++ + + A+ + + P
Sbjct: 145 RAYWHWYFLQQPAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAA 204
Query: 205 ----------FFFNDFVHD-----------VLIVWGDQDQIFPLKMATELKELLGKKARL 243
DF D L+ G + L + R
Sbjct: 205 IHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPRLANMRF 264
Query: 244 EIIENTSHVPQIENPGLFNSIVKNFLRGS 272
+ H P I++ FL +
Sbjct: 265 ASLP-GGHFFVDRFPDDTARILREFLSDA 292
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 2e-19
Identities = 39/267 (14%), Positives = 79/267 (29%), Gaps = 54/267 (20%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELF----QAA 109
++ HG P + + WR + A + DLI G S E +
Sbjct: 29 GDPILFQHGN-PTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHRD 87
Query: 110 SLGKLLEKIGV-ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN----- 163
L L E + + +R +V +G + + AR ERV+ + + +
Sbjct: 88 YLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQD 147
Query: 164 EALVKRANLERIDHLMLPESASQLRTLTGLAVSK-------------------------- 197
L + + + L+L ++ + L GL +
Sbjct: 148 RDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSW 207
Query: 198 ------------NLDIVPDFFFNDFVHDV--LIVWGDQDQIFPLKMATELKELLGKKARL 243
+ I D+ + L + + + + +
Sbjct: 208 PRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTT-GRMRDFCRTW--PNQT 264
Query: 244 EIIENTSHVPQIENPGLFNSIVKNFLR 270
EI +H Q ++P + + F+R
Sbjct: 265 EITVAGAHFIQEDSPDEIGAAIAAFVR 291
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 2e-19
Identities = 41/264 (15%), Positives = 82/264 (31%), Gaps = 50/264 (18%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTT-RSIQRTELFQAASLG 112
+ +++ +HG + + WR V P +PDLI G S + L L
Sbjct: 43 ENAVIFLHGN-ATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSGNGSYRLLDHYKYLT 101
Query: 113 KLLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV-----NMKRGDNEAL 166
E + + + VG +G +A+H A +R++ +V S V + D E
Sbjct: 102 AWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEED 161
Query: 167 VKRANLERIDHLMLPESASQLRTLTG----------------------------LAVSKN 198
+ E + ++L + L L+ +
Sbjct: 162 IALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPRE 221
Query: 199 LDIVPDFFFN------------DFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEII 246
+ +V + D+ ++ + D F E + +
Sbjct: 222 IPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDPGFFSNAIVEGAKKF-PNTEFVKV 280
Query: 247 ENTSHVPQIENPGLFNSIVKNFLR 270
+ H Q + P +K+F+
Sbjct: 281 K-GLHFLQEDAPDEMGKYIKSFVE 303
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 3e-19
Identities = 44/252 (17%), Positives = 80/252 (31%), Gaps = 43/252 (17%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ--RTELFQAASLG 112
P ++ +HG G A W + DL GHS R +L + +L
Sbjct: 82 PRVIFLHGGGQNAHT-WDTVIVGLG--EPALAVDLPGHGHSAWREDGNYSPQLN-SETLA 137
Query: 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIA-SSGVNMKRGDNEALVKRAN 171
+L ++ VVG S GG A +A M P+ V ++V+ + ++R +R
Sbjct: 138 PVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGT 197
Query: 172 L-------------ERIDHLM-LPESASQLRTLTGLAVSKNLDIVPD----FFFN----- 208
+ +D + G+ N + + + ++
Sbjct: 198 VALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVF--HNSRRLDNGNWVWRYDAIRTF 255
Query: 209 -----------DFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIEN 257
+ +V G + EL + I+E + H Q +
Sbjct: 256 GDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQ 315
Query: 258 PGLFNSIVKNFL 269
P IV+ L
Sbjct: 316 PRALIEIVRGVL 327
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 8e-19
Identities = 27/138 (19%), Positives = 51/138 (36%), Gaps = 12/138 (8%)
Query: 21 ASAGLSSQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFF 78
+ + + +++ + G + P ++ +HG P + WR +
Sbjct: 3 KPIEIEIRRAPVLG-SSMAYRETGAQ--------DAPVVLFLHGN-PTSSHIWRNILPLV 52
Query: 79 APHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHM 138
+P + PDLI FG S I L +E+ GV +V +G +A+H+
Sbjct: 53 SPVAHCIAPDLIGFGQSGKPDIAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHL 112
Query: 139 ARMWPERVEKVVIASSGV 156
A P+ V +
Sbjct: 113 AARRPDFVRGLAFMEFIR 130
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-07
Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Query: 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271
L+ G+ + + A L + L + H Q ++ V ++ G
Sbjct: 244 KLLFTGEPGALVSPEFAERFAASL-TRCALIRLGAGLHYLQEDHADAIGRSVAGWIAG 300
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 1e-18
Identities = 51/267 (19%), Positives = 88/267 (32%), Gaps = 56/267 (20%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHST-TRSIQRTELFQAASLGK 113
L+L+HG+ P+ W K A +F V DL +G S+ S+ + + +
Sbjct: 26 APLLLLHGY-PQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPASVPHHINYSKRVMAQ 84
Query: 114 ----LLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS---GVNMKRGDN--- 163
++ K+G E+F VVG G VA+ +A P RV+K+ + + D
Sbjct: 85 DQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFA 144
Query: 164 ----------------EALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDI--VPD- 204
E L+ + L + A+++ + P
Sbjct: 145 TAYYHWFFLIQPDNLPETLIGANPEYYLRK-CLEKWGKDFSAFHPQALAEYIRCFSQPAV 203
Query: 205 ----------FFFNDFVHD-----------VLIVWGDQDQIFPLKMATELKELLGKKARL 243
D HD VL++WG++ I
Sbjct: 204 IHATCEDYRAAATIDLEHDELDMKQKISCPVLVLWGEKGIIGRKYDVLATWRERAIDVSG 263
Query: 244 EIIENTSH-VPQIENPGLFNSIVKNFL 269
+ + H +P+ E P + NFL
Sbjct: 264 QSLP-CGHFLPE-EAPEETYQAIYNFL 288
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 81.7 bits (201), Expect = 2e-18
Identities = 44/255 (17%), Positives = 81/255 (31%), Gaps = 38/255 (14%)
Query: 53 KKPSLVLIHGFG-----PEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELF- 106
K+P++ H G +Q +F D +
Sbjct: 34 KRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPS 93
Query: 107 ---QAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN 163
A + +L+ + VG G ++ A P+ VE +V+ + N K +
Sbjct: 94 LDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMD 153
Query: 164 EALVKRANLER--IDHLM-----------LPESASQLRTLTGLAVS-KNLDIVPDFFFN- 208
A K L D ++ E + R + A + +N+++ + + N
Sbjct: 154 WAAHKLTGLTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNR 213
Query: 209 -DFVHD----------VLIVWGDQDQIFPLKMATELKELL-GKKARLEIIENTSHVPQIE 256
D + V++V GDQ E L + + ++ PQ+
Sbjct: 214 RDLNFERGGETTLKCPVMLVVGDQAP--HEDAVVECNSKLDPTQTSFLKMADSGGQPQLT 271
Query: 257 NPGLFNSIVKNFLRG 271
PG K FL+G
Sbjct: 272 QPGKLTEAFKYFLQG 286
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 2e-16
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGK 113
++ +HG P + + WR + + + PDLI G S I+ A +
Sbjct: 30 QPVLFLHGN-PTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIEYRLQDHVAYMDG 88
Query: 114 LLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV 156
++ +G++ +V +G + AR+ P+RV V + V
Sbjct: 89 FIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALV 131
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 4e-06
Identities = 10/57 (17%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
L+ + + P + L E + + + +H Q ++P L + ++LR
Sbjct: 239 KLLFHAEPGALAPKPVVDYLSENV-PNLEVRFVGAGTHFLQEDHPHLIGQGIADWLR 294
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 75.8 bits (186), Expect = 4e-16
Identities = 34/250 (13%), Positives = 83/250 (33%), Gaps = 44/250 (17%)
Query: 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYV 86
+ +++ LH W +++ K ++++ GF + + ++ + + F+V+
Sbjct: 10 HVLRVNNGQELHVWETPPKENVPF-KNNTILIASGFA-RRMDHFAGLAEYLSTNGFHVFR 67
Query: 87 PDLIFFGH---STTRSIQRT---ELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140
D H S+ + T ++ L+ G + ++ S VAY +
Sbjct: 68 YD--SLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVIS 125
Query: 141 MWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLD 200
+ ++ A VN++ +AL D+L LP + L +
Sbjct: 126 --DLELSFLITAVGVVNLRDTLEKAL-------GFDYLSLP-----IDELPNDLDFEGHK 171
Query: 201 IVPDFFFNDFVHD------------------VLIVWGDQDQIFPLKMATEL-KELLGKKA 241
+ + F D ++ + D + ++ +
Sbjct: 172 LGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHC 231
Query: 242 RLEIIENTSH 251
+L + +SH
Sbjct: 232 KLYSLLGSSH 241
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 8e-16
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELF----QA 108
P+L+L+HG+ P W+W K + A H++V VPDL FG S + + A
Sbjct: 28 AGPTLLLLHGW-PGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAA 86
Query: 109 ASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIAS 153
LL+ +G+E+ VVG + V + R + +RV K I
Sbjct: 87 DDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFD 131
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 9e-06
Identities = 14/57 (24%), Positives = 21/57 (36%)
Query: 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
V ++WG D P E +E IE+ H +E P + +K R
Sbjct: 238 VTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 294
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 5e-15
Identities = 24/139 (17%), Positives = 58/139 (41%), Gaps = 15/139 (10%)
Query: 22 SAGLSSQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFA 79
S + + ++ + WG + P ++ IHG E W++ A
Sbjct: 1 SNAMEEKFLEFGG-NQICLCSWGSP--------EHPVVLCIHGI-LEQGLAWQEVALPLA 50
Query: 80 P-HFNVYVPDLIFFGHSTTRSIQRT-ELFQ-AASLGKLLEKIGVERFSVVGTSYGGFVAY 136
+ V PDL G S+ + + A + ++++++ + +VG S G +A
Sbjct: 51 AQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLAT 110
Query: 137 HMARMWPERVEKVVIASSG 155
+A + P++++++++
Sbjct: 111 AIASVRPKKIKELILVELP 129
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 71.6 bits (175), Expect = 2e-14
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYV 86
+ ++ T +H + D + P +VL+HGF PE+ + WR Q+ A + V
Sbjct: 6 RILNCRG-TRIHA----VADSPPDQQGPLVVLLHGF-PESWYSWRHQIPALAGAGYRVVA 59
Query: 87 PDLIFFGHSTTRSIQRTELFQAASLGK----LLEKIGVERFSVVGTSYGGFVAYHMARMW 142
D +G S+ + + ++ L +L+ G E+ VVG +G VA+ A +
Sbjct: 60 IDQRGYGRSS--KYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLH 117
Query: 143 PERVEKVVIAS 153
P+R VV S
Sbjct: 118 PDRCAGVVGIS 128
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 40.4 bits (94), Expect = 4e-04
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 214 VLIVWGDQD--QIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271
L + G D I+ + E++ +I + H Q E P N ++ +FL G
Sbjct: 294 ALFIGGQYDVGTIWGAQAIERAHEVMPNYRGTHMIADVGHWIQQEAPEETNRLLLDFLGG 353
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 71.0 bits (174), Expect = 2e-14
Identities = 36/167 (21%), Positives = 59/167 (35%), Gaps = 17/167 (10%)
Query: 25 LSSQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQV--QFFAP 80
+S + + D L +G D P+L+L+ G A+ W + +
Sbjct: 1 MSERIVPSGD-VELWSDDFGD--PAD------PALLLVMGGNLSALG-WPDEFARRLADG 50
Query: 81 HFNVYVPDLIFFGHSTTRSIQRTE--LFQ-AASLGKLLEKIGVERFSVVGTSYGGFVAYH 137
+V D G STTR + AA +L+ GV+R VVG S G +
Sbjct: 51 GLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQV 110
Query: 138 MARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESA 184
+A +R+ + + G D +D L P+
Sbjct: 111 IALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQP 157
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 1e-08
Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Query: 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272
L++ + D I P L L+ ARL I H G ++ R +
Sbjct: 240 TLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGHALPSSVHGPLAEVILAHTRSA 297
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 4e-13
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLG 112
P+++ IHGF PE + WR Q+ + A + PDL +G +T + F L
Sbjct: 31 GPTILFIHGF-PELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLV 89
Query: 113 K----LLEKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIAS 153
LLE I E+ VV +G +A+H+ P++V+ +V S
Sbjct: 90 GDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLS 136
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 2e-05
Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 6/63 (9%)
Query: 214 VLIVWGDQDQIFPLKMATELKELLGKKA------RLEIIENTSHVPQIENPGLFNSIVKN 267
+ G+ D ++ + A E G K + ++E +H E P + + +
Sbjct: 264 TKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQERPHEISKHIYD 323
Query: 268 FLR 270
F++
Sbjct: 324 FIQ 326
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 66.4 bits (162), Expect = 8e-13
Identities = 43/266 (16%), Positives = 83/266 (31%), Gaps = 56/266 (21%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFA--PHFNVYVPDLIFFGHSTTRSIQ--RTELFQAAS 110
P L+L+HG G A W + DL G + ++ + E A
Sbjct: 39 PVLLLLHGGGHSA-LSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETM-AKD 96
Query: 111 LGKLLEKIGVE---RFSVVGTSYGGFVAYHMA-RMWPERVEKVVI-------ASSGVN-- 157
+G ++E + + ++G S GG +A H A + + + A +N
Sbjct: 97 VGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSM 156
Query: 158 ---MKRGDN---------EALVKRANLERID--HLMLPESASQLRTLTGLAVSK------ 197
++ E VK + ++ + + Q +T SK
Sbjct: 157 QNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYT 216
Query: 198 ---NLDIVPDFFFNDFVHD----------VLIVWGDQDQIFPLKMATELKELLGKKARLE 244
L ++ F L++ D L + ++ G K +++
Sbjct: 217 WRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVD---RLDKDLTIGQMQG-KFQMQ 272
Query: 245 IIENTSHVPQIENPGLFNSIVKNFLR 270
++ H + P V FL
Sbjct: 273 VLPQCGHAVHEDAPDKVAEAVATFLI 298
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 3e-12
Identities = 39/236 (16%), Positives = 79/236 (33%), Gaps = 27/236 (11%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRT----ELFQA 108
+ +++L+HGF R +F + + P GH + +Q
Sbjct: 16 ERAVLLLHGFT-GNSADVRMLGRFLESKGYTCHAPIYK--GHGVPPEELVHTGPDDWWQD 72
Query: 109 ASLG-KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALV 167
G + L+ G E+ +V G S GG + + P +E +V + M E +
Sbjct: 73 VMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCA--PMYIKSEETMY 128
Query: 168 KRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDV-----------LI 216
+ LE E S+ + + K + + + DV +
Sbjct: 129 EGV-LEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFV 187
Query: 217 VWGDQDQIFPLKMATELKELLG-KKARLEIIENTSHVPQIEN-PGLFNSIVKNFLR 270
V D++ A + + +++ E + HV ++ + + FL
Sbjct: 188 VQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLE 243
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 5e-12
Identities = 39/217 (17%), Positives = 68/217 (31%), Gaps = 29/217 (13%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQR------TELF 106
+VL+H + + + + VYVP GH T + +
Sbjct: 22 DTGVVLLHAYT-GSPNDMNFMARALQRSGYGVYVPLFS--GHGTVEPLDILTKGNPDIWW 78
Query: 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL 166
+S + V G S GG A P V +S + K
Sbjct: 79 AESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGF 138
Query: 167 VKRA----NLERIDHLMLPESASQLRTLTGLA-----VSKNLDIVPDFFFNDFVHDVLIV 217
+K A L A L + V+ +L++V I
Sbjct: 139 LKYAEYMNRLAGKSDESTQILAYLPGQLAAIDQFATTVAADLNLVKQ--------PTFIG 190
Query: 218 WGDQDQIFPLKMATELKELLGKKARLEII--ENTSHV 252
QD++ ++A +L++ L AR++ ++ HV
Sbjct: 191 QAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHV 227
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 8e-12
Identities = 33/235 (14%), Positives = 71/235 (30%), Gaps = 40/235 (17%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASL 111
P ++ +HG+ + + + D GH + Q+ +
Sbjct: 27 GMPGVLFVHGW-GGSQHHSLVRAREAVGLGCICMTFD--LRGHE-----GYASMRQSVTR 78
Query: 112 GKLLE-------------KIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158
+ L+ + +VVG SYGG+++ + R VE + + S +
Sbjct: 79 AQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRE--RPVEWLALRSPALYK 136
Query: 159 KRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVW 218
+ ++ P+ R D + + DVL+V
Sbjct: 137 DA--------HWDQPKVSLNADPDLMDYRRRALAPG-----DNLALAACAQYKGDVLLVE 183
Query: 219 GDQDQIFPLKMATELKELL--GKKARLEIIENTSHV-PQIENPGLFNSIVKNFLR 270
+ D I P + + + +I H E+ + + ++L
Sbjct: 184 AENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLT 238
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 63.5 bits (154), Expect = 9e-12
Identities = 31/246 (12%), Positives = 71/246 (28%), Gaps = 15/246 (6%)
Query: 17 RRCFASA----GLSSQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW 71
+ A + ++I ++ + D P +++ G W
Sbjct: 154 NSAYLEAAKKSKYIIKQLEIPFEKGKITAHLHLTNTDKP---HPVVIVSAGLDSLQTDMW 210
Query: 72 RKQVQFFAPH-FNVYVPDLIFFGHSTT-RSIQRTELFQAASLGKLLEKIGV--ERFSVVG 127
R A H + D+ G+S+ + A L +L V R ++G
Sbjct: 211 RLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVLNELFSIPYVDHHRVGLIG 270
Query: 128 TSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQL 187
+GG ++ + E++ K + + +++ +D L S +
Sbjct: 271 FRFGGNAMVRLSFLEQEKI-KACVILGAPIHDIFASPQKLQQMPKMYLDVLASRLGKSVV 329
Query: 188 RTLTGLAVSKNLDIVPDFFFN--DFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEI 245
+ + F + +L + + D + P + +I
Sbjct: 330 DIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFSTYGKAKKI 389
Query: 246 IENTSH 251
T
Sbjct: 390 SSKTIT 395
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 63.8 bits (155), Expect = 1e-11
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHST-TRSIQRTELFQ-AAS 110
P++ L HGF PE+ + WR Q+ A + V D+ +G S+ I+ +
Sbjct: 258 GPAVCLCHGF-PESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKE 316
Query: 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIAS 153
+ L+K+G+ + +G +GG + ++MA +PERV V +
Sbjct: 317 MVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLN 359
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 2e-05
Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
L+V ++D + +M+ +++ + + IE+ H Q++ P N I+ +L
Sbjct: 488 ALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIEDCGHWTQMDKPTEVNQILIKWLD 543
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 61.9 bits (150), Expect = 2e-11
Identities = 38/253 (15%), Positives = 77/253 (30%), Gaps = 41/253 (16%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ-AAS 110
K VL+H A W W K V NV DL G + +++Q +
Sbjct: 11 VKKHFVLVHAAFHGA-WCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSP 69
Query: 111 LGKLLEKI-GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169
L + + + E+ +VG + GG +PE++ V S + D + +
Sbjct: 70 LMEFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTK 129
Query: 170 ANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFND-FVHDVLI------------ 216
A + L + T + + ++ + D+ +
Sbjct: 130 AGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPLYLYL 189
Query: 217 ----------------------VWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQ 254
+ ++ + + E ++ IE + HV
Sbjct: 190 AEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNP-PDEVKEIEGSDHVTM 248
Query: 255 IENPG-LFNSIVK 266
+ P LF +++
Sbjct: 249 MSKPQQLFTTLLS 261
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Length = 264 | Back alignment and structure |
|---|
Score = 61.1 bits (148), Expect = 3e-11
Identities = 40/245 (16%), Positives = 82/245 (33%), Gaps = 41/245 (16%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ-AAS 110
++ VL+HG A W W K V DL G + R + +
Sbjct: 9 QQKHFVLVHGGCLGA-WIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEP 67
Query: 111 LGKLLEKIGV-ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169
L +++ I E+ ++G S+GG +PE++ V S+ + ++
Sbjct: 68 LMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEK 127
Query: 170 ANLERIDHLMLP--ESASQLRTLTGLAVSKNLDIVPDFFFND------------------ 209
N + +ML S G+++ + F +
Sbjct: 128 YNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSL 187
Query: 210 FVHDVLI----------------VWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVP 253
F D+ ++ ++D+ FP++ E +G +++ I+ H+
Sbjct: 188 FFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVG-ADKVKEIKEADHMG 246
Query: 254 QIENP 258
+ P
Sbjct: 247 MLSQP 251
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 60.5 bits (146), Expect = 9e-11
Identities = 46/320 (14%), Positives = 90/320 (28%), Gaps = 79/320 (24%)
Query: 29 TIDIDDETTLHF--WGPK-LEDDHKTLKKPSLVLIHGFG-PEAIWQ--WRKQVQFFAPHF 82
T+ D L + + + +T + +LV +HG G + +W+ + V A
Sbjct: 24 TLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGN 83
Query: 83 ----NVYVPDLIFFGHSTTRSIQRTELF-----QAASLGKLLEKIGVERFS------VVG 127
V + D + G S R+ R A + K+ S V+G
Sbjct: 84 YAIDKVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIG 143
Query: 128 TSYGGFVAYHMARMWPER------VEKVVIASSGVNMKRG---DNEALVKRANLERIDHL 178
S GGF A + P +E VVI + R + + +
Sbjct: 144 HSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLK 203
Query: 179 MLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHD------------------------- 213
A++ + + + +
Sbjct: 204 TCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNL 263
Query: 214 -----------------------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTS 250
+ + G + P + L++ L + L++I S
Sbjct: 264 LCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTL-QNYHLDVIPGGS 322
Query: 251 HVPQIENPGLFNSIVKNFLR 270
H+ +E P L + + +
Sbjct: 323 HLVNVEAPDLVIERINHHIH 342
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 1e-10
Identities = 42/240 (17%), Positives = 67/240 (27%), Gaps = 31/240 (12%)
Query: 48 DHKTLKKPSLVLIHGF-GPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHS--------TT 97
+ K P ++IHGF G + D +GH T
Sbjct: 21 KNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRAD--MYGHGKSDGKFEDHT 78
Query: 98 RSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157
T + + V + G S GG A M + ++ ++ S
Sbjct: 79 LFKWLTNILAVVD--YAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAM 136
Query: 158 MKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHD---- 213
+ + R +L G + N V
Sbjct: 137 IPE------IARTGELLGLKFDPENIPDELDAWDGRKLKGNY--VRVAQTIRVEDFVDKY 188
Query: 214 ---VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
VLIV GDQD+ P + + + K +L I +H + L VK F+
Sbjct: 189 TKPVLIVHGDQDEAVPYEASVAFSKQY-KNCKLVTIPGDTHCYD-HHLELVTEAVKEFML 246
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E Length = 320 | Back alignment and structure |
|---|
Score = 59.7 bits (144), Expect = 1e-10
Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 16/168 (9%)
Query: 47 DDHKTLKKPSLVLIHGFG-----PEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI 100
D++ + P ++L+HG + W + VYV +L G +
Sbjct: 2 DNYAATRYP-IILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANL--SGFQSDDGP 58
Query: 101 QRT--ELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158
+L A + +L G + ++VG S GG + ++A + P+ V V +
Sbjct: 59 NGRGEQL--LAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGT---P 113
Query: 159 KRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFF 206
RG A + L + + + G+ S + + D
Sbjct: 114 HRGSEFADFVQGVLAYDPTGLSSTVIAAFVNVFGILTSSSNNTNQDAL 161
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 58.9 bits (142), Expect = 2e-10
Identities = 38/244 (15%), Positives = 65/244 (26%), Gaps = 39/244 (15%)
Query: 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ-AA 109
+ VLIH A W W K V DL G + + + +
Sbjct: 1 MAFAHFVLIHTICHGA-WIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSE 59
Query: 110 SLGKLLEKIGV-ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVK 168
L LE + E+ +VG S GG A + E++ V +S + +V
Sbjct: 60 PLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVD 119
Query: 169 RANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLI------------ 216
+ D + ++ + + +
Sbjct: 120 KLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLF 179
Query: 217 ----------------------VWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQ 254
VW DQD+IF + E ++ +E H Q
Sbjct: 180 QNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK-PDKVYKVEGGDHKLQ 238
Query: 255 IENP 258
+
Sbjct: 239 LTKT 242
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 1e-09
Identities = 32/221 (14%), Positives = 63/221 (28%), Gaps = 39/221 (17%)
Query: 53 KKPSLVLIHGFGPEAIWQ-WRKQVQFFAPH-FNVYVPDLIFFGH--------STTRSIQR 102
++ HGF R+ D F GH + T +
Sbjct: 45 IYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFD--FNGHGDSDGKFENMTVLNEI 102
Query: 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD 162
+ + + V +VG + GG VA +A ++P+ ++KVV+ + +K
Sbjct: 103 EDANAILN--YVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDA 160
Query: 163 NEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHD--------- 213
E + P+ L + +
Sbjct: 161 LEGNTQGVTYN-------PDHIPDRLPFKDLTLGG------FYLRIAQQLPIYEVSAQFT 207
Query: 214 --VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHV 252
V ++ G D + + + ++ L +IE H
Sbjct: 208 KPVCLIHGTDDTVVSPNASKKYDQIYQNS-TLHLIEGADHC 247
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 2e-09
Identities = 43/243 (17%), Positives = 83/243 (34%), Gaps = 42/243 (17%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTT----RSIQRTELFQA 108
++L+HGF R + +A + V +P L GH T + +
Sbjct: 40 PVGVLLVHGFT-GTPHSMRPLAEAYAKAGYTVCLPRLK--GHGTHYEDMERTTFHDWVAS 96
Query: 109 ASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK--------- 159
G K + V G S GG + ++A P+ +V ++ V++
Sbjct: 97 VEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDIC-GIVPINAAVDIPAIAAGMTGG 155
Query: 160 ------RGDNEALVKRANLERIDHLMLP-ESASQLRTLTGLAVSKNLD--IVPDFFFNDF 210
+ +K +++ + + P S QL L LD + P
Sbjct: 156 GELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLM-AQTKAKLDRIVCP------- 207
Query: 211 VHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTSHVPQIEN--PGLFNSIVKN 267
LI D+D + P A + + + + + + N+ HV ++ P + +
Sbjct: 208 ---ALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSL-E 263
Query: 268 FLR 270
F
Sbjct: 264 FFA 266
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 55.7 bits (134), Expect = 2e-09
Identities = 34/245 (13%), Positives = 74/245 (30%), Gaps = 41/245 (16%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ-AAS 110
+ VL+HG W W K V DL G + + L+
Sbjct: 3 EGKHFVLVHGACHGG-WSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLP 61
Query: 111 LGKLLEKIGV-ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169
L +L+E + E+ +VG S GG +P+++ V ++ + ++ ++++
Sbjct: 62 LMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQ 121
Query: 170 ANLERIDHLML--PESASQLRTLTGLAVSKNLDIVPDFFFND------------------ 209
N L ++ + +
Sbjct: 122 YNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSL 181
Query: 210 FVHDV----------------LIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVP 253
F+ D+ + + +D+ P + + +G +E I+ H+
Sbjct: 182 FMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIE-IKGADHMA 240
Query: 254 QIENP 258
+ P
Sbjct: 241 MLCEP 245
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 56.2 bits (135), Expect = 3e-09
Identities = 37/287 (12%), Positives = 92/287 (32%), Gaps = 36/287 (12%)
Query: 17 RRCFASA----GLSSQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW 71
+ F A + ++I++ + L + ED + +L+++ G +
Sbjct: 121 EKLFMLAVDNSKIPLKSIEVPFEGELLPGYAIISEDK----AQDTLIVVGGGDTSREDLF 176
Query: 72 RKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV--ERFSVVGT 128
H +NV + DL G + + + +AA + +L+ E+ ++ G
Sbjct: 177 YMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHFEVDARAA-ISAILDWYQAPTEKIAIAGF 235
Query: 129 SYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLR 188
S GG+ R++ + ++ ++ + + + + +
Sbjct: 236 SGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFSTALKAPKTILKWGSKLVTSVN 294
Query: 189 TLTGLA----------------VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATE 232
+ + V++ L+ +N L + G + ++ +
Sbjct: 295 KVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQV 354
Query: 233 LKELL---GKKARLEIIENTSHVP---QIENPGLFNSIVKNFLRGSL 273
L + G L + S Q+ N L + V +L
Sbjct: 355 LYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIF 401
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 55.8 bits (134), Expect = 4e-09
Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 31/233 (13%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHF-----NVYVPDLIFFGHSTTRSIQRTELFQ 107
P+++++ G +++ D G + +
Sbjct: 151 PHPAVIMLGGLE-----STKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEK 205
Query: 108 AAS-LGKLLEKIG---VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN 163
S + LL K+ + V+G S GG A A P R+ + ++ D
Sbjct: 206 YTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDL 264
Query: 164 EALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLD-I-VPDFFFNDFVHDVLIVWGDQ 221
E + + + + + + E A +L L L I P I+ G
Sbjct: 265 ETPLTKESWKYVSKVDTLEEA-RLHVHAALETRDVLSQIACP----------TYILHGVH 313
Query: 222 DQIFPLKMATELKELL-GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGSL 273
D++ PL + EL+ + L + ++ H + ++L L
Sbjct: 314 DEV-PLSFVDTVLELVPAEHLNLVVEKDGDH-CCHNLGIRPRLEMADWLYDVL 364
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} Length = 258 | Back alignment and structure |
|---|
Score = 52.3 bits (125), Expect = 3e-08
Identities = 32/258 (12%), Positives = 78/258 (30%), Gaps = 43/258 (16%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ-AAS 110
+K VL+H A W W K V +L G + + +
Sbjct: 3 RKHHFVLVHNAYHGA-WIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKP 61
Query: 111 LGKLLEKIGV-ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169
L + L+ + E +VG S+GG A ++P +++ +V ++ + ++ +
Sbjct: 62 LIETLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDK 121
Query: 170 ANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIV------------ 217
S+ + R T + + + + + +
Sbjct: 122 YMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQNCPIEDYELAKMLHRQGSFFT 181
Query: 218 -------------WGD---------QDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255
+G +D+ P + + ++ I+ H+ +
Sbjct: 182 EDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNVS-KVYEIDGGDHMVML 240
Query: 256 ENP----GLFNSIVKNFL 269
P ++I +++
Sbjct: 241 SKPQKLFDSLSAIATDYM 258
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 52.1 bits (124), Expect = 3e-08
Identities = 33/219 (15%), Positives = 55/219 (25%), Gaps = 44/219 (20%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELF----- 106
K L+ +HG + + +A F + D G
Sbjct: 23 PKALLLALHGL-QGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEV 81
Query: 107 ---------QAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157
+A + + E+ + G S G FVA+ + + SG
Sbjct: 82 YRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFP 141
Query: 158 MKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIV 217
MK + + L + +L +
Sbjct: 142 MKLPQGQVVEDPGVLALYQAPPATRGEAYGGV-----------------------PLLHL 178
Query: 218 WGDQDQIFPLKMATELKELL---GKKARLEII--ENTSH 251
G +D I PL + E L + RL E H
Sbjct: 179 HGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGH 217
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 Length = 131 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 9e-08
Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 9/87 (10%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKL 114
P ++L+ E +W + + + Y+ DL +G + + EL A +
Sbjct: 23 PPVLLVA----EEASRWPEAL---PEGYAFYLLDLPGYGRTEGPRMAPEEL--AHFVAGF 73
Query: 115 LEKIGVERFSVVGTSYGGFVAYHMARM 141
+ + V+ G + H+ +
Sbjct: 74 AVMMNLGAPWVLLRGLGLALGPHLEAL 100
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 8e-07
Identities = 36/254 (14%), Positives = 70/254 (27%), Gaps = 30/254 (11%)
Query: 13 RIYLRRCFASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWR 72
+ R F G+ Q++ F P ++ I G G
Sbjct: 123 QAQHERHFLPPGVWRQSVRAGRVRATLFLP------PGPGPFPGIIDIFGIGG---GLLE 173
Query: 73 KQVQFFAPH-FNVYVPDLIFFGHS--TTRSIQRTELFQAASLGKLLEKIGVERFSVVGTS 129
+ A H F F +I +A ++ ++G S
Sbjct: 174 YRASLLAGHGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGIS 233
Query: 130 YGGFVAYHMARMWPERVEKVVIASSGVN------MKRGDNEALVKRANLERIDHLMLPES 183
G + MA V I SG++ K L ++ L +
Sbjct: 234 LGADICLSMASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDI 293
Query: 184 ASQLRTLTGLAVSKNLDIVPDFFFNDFVH-DVLIVWGDQDQIFP-----LKMATELKELL 237
L G + ++ + + +L++ G D + ++ L+
Sbjct: 294 VDIRNALVGGYKNPSMIPI------EKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHG 347
Query: 238 GKKARLEIIENTSH 251
+K ++ T H
Sbjct: 348 KEKPQIICYPGTGH 361
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 9e-07
Identities = 40/263 (15%), Positives = 74/263 (28%), Gaps = 32/263 (12%)
Query: 13 RIYLRRCFASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWR 72
+ R F G+ + + + F P+ P +V + G G +
Sbjct: 139 QTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGP------FPGIVDMFGTGGGLLEYR- 191
Query: 73 KQVQFFAPH-FNVYVPDLIFFGHS--TTRSIQRTELFQAASLGKLLEKIGVERFSVVGTS 129
A F V + T ++ +A + ++ ++G S
Sbjct: 192 --ASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGIS 249
Query: 130 YGGFVAYHMARMWPERVEKVVIASSGVNM------KRGDNEALVKRANLERIDHLMLPES 183
GG + MA VVI S N+ K + N ++ +
Sbjct: 250 KGGELCLSMASFLKGITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTKDGYADI 309
Query: 184 ASQLRTLTGLAVSKNLDIVPDFFFNDFVH-DVLIVWGDQDQIFPLK-----MATELKELL 237
L + K+ V + L + G D + + L+
Sbjct: 310 VDVLNSPLEGPDQKSFIPV------ERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHG 363
Query: 238 GKKARLEIIENTSHVPQIENPGL 260
+K ++ T H IE P
Sbjct: 364 RRKPQIICYPETGHY--IEPPYF 384
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} Length = 346 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 1e-06
Identities = 40/248 (16%), Positives = 76/248 (30%), Gaps = 42/248 (16%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDL---------------IFFGHSTT 97
K P+L+ HG W ++ + A F V D+
Sbjct: 107 KHPALIRFHG-YSSNSGDWNDKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHII 165
Query: 98 RSI-----------QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERV 146
R + + Q A + + ++ +R V+G S GG ++ A + P RV
Sbjct: 166 RGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEP-RV 224
Query: 147 EKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFF 206
KVV ++ + + + + + I R +D+
Sbjct: 225 RKVVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVK---- 280
Query: 207 FNDFVHD----VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFN 262
+ VL+ G DQ+ P + K +++ + H E F
Sbjct: 281 --NLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQSKKDIKVYPDYGH----EPMRGFG 334
Query: 263 SIVKNFLR 270
+ F+
Sbjct: 335 DLAMQFML 342
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* Length = 316 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 2e-06
Identities = 16/99 (16%), Positives = 27/99 (27%), Gaps = 5/99 (5%)
Query: 53 KKPSLVLIHGFG--PEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAAS 110
++L+ G G + + F Q + +
Sbjct: 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFM---LNDTQVNTEYMVNA 120
Query: 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKV 149
+ L G + V+ S GG VA +P KV
Sbjct: 121 ITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKV 159
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* Length = 317 | Back alignment and structure |
|---|
Score = 46.3 bits (109), Expect = 4e-06
Identities = 18/99 (18%), Positives = 29/99 (29%), Gaps = 6/99 (6%)
Query: 53 KKPSLVLIHGFG--PEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAAS 110
KP ++L+ G G + + F Q + +
Sbjct: 31 SKP-ILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFM---LNDTQVNTEYMVNA 86
Query: 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKV 149
+ L G + V+ S GG VA +P KV
Sbjct: 87 ITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKV 125
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} Length = 258 | Back alignment and structure |
|---|
Score = 45.0 bits (106), Expect = 9e-06
Identities = 33/225 (14%), Positives = 55/225 (24%), Gaps = 52/225 (23%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAA---- 109
P ++ +G G + + +A H F V + T R + +
Sbjct: 50 PVILWGNGTG-AGPSTYAGLLSHWASHGFVVAAAE--TSNAGTGREMLACLDYLVRENDT 106
Query: 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169
G K+ R G S GG + + RV
Sbjct: 107 PYGTYSGKLNTGRVGTSGHSQGGGGSIMAGQ--DTRVRTTAPIQPYT------------- 151
Query: 170 ANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQI-FPLK 228
L L ++ R P + ++ G D I FP
Sbjct: 152 --------LGLGHDSASQRRQQ----------GP----------MFLMSGGGDTIAFPYL 183
Query: 229 MATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGSL 273
A + SH + + G + + R L
Sbjct: 184 NAQPVYRRANVPVFWGERRYVSHFEPVGSGGAYRGPSTAWFRFQL 228
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 Length = 285 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 1e-05
Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 18/103 (17%)
Query: 57 LVLIHGFG----PEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASL 111
+VL HG + W VYV ++ S R L
Sbjct: 10 IVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVR---------GEQL 60
Query: 112 GKLLEKI----GVERFSVVGTSYGGFVAYHMARMWPERVEKVV 150
+ +E+I G + +++G S+GG ++A + P+ +
Sbjct: 61 LQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASAT 103
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A Length = 181 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-05
Identities = 17/103 (16%), Positives = 37/103 (35%), Gaps = 11/103 (10%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFA----PHFNVYVPDLIFFGHSTTRSIQRTELFQAA 109
+V++HG G + + + + +Y D T + +
Sbjct: 3 HNPVVMVHGIGGAS-FNFAGIKSYLVSQGWSRDKLYAVDF----WDKTGTNYNNGPVLSR 57
Query: 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW--PERVEKVV 150
+ K+L++ G ++ +V S GG + + +V VV
Sbjct: 58 FVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVV 100
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 3e-05
Identities = 43/276 (15%), Positives = 78/276 (28%), Gaps = 74/276 (26%)
Query: 8 LVSLYRI----YLRRCFASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGF 63
L L + R S+ + + I E E L LVL++
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE---NCL----LVLLN-- 252
Query: 64 GPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ---------RTELFQAASLGKL 114
+ + FN+ L+ TTR Q T + L
Sbjct: 253 ----VQNAK-----AWNAFNLSCKILL-----TTRFKQVTDFLSAATTTHISLDHHSMTL 298
Query: 115 LEKIGVERFS-VVGTSYGGFVAYHMARMWPERVEKV---VIASSGVNMK----RGDNEAL 166
+ P V ++ +++ DN
Sbjct: 299 TPDEVKSLLLKYLDCRPQDL---------PREVLTTNPRRLSIIAESIRDGLATWDN--- 346
Query: 167 VKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFF-FNDFVH---DVL-IVWGDQ 221
K N +++ ++ +S L L K D F H +L ++W D
Sbjct: 347 WKHVNCDKLTTII---ESS-LNVLEPAEYRKMFD---RLSVFPPSAHIPTILLSLIWFDV 399
Query: 222 DQIFPLKMATEL--KELLGKKARLEIIENTSHVPQI 255
+ + + +L L+ K+ + E+T +P I
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPK----ESTISIPSI 431
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} Length = 194 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 3e-05
Identities = 30/223 (13%), Positives = 61/223 (27%), Gaps = 49/223 (21%)
Query: 54 KPSLVLIHGFG----PEAIWQ-WRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQA 108
V++ G G W W K+ P F ++ + ++
Sbjct: 4 PSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITAR----------ES 53
Query: 109 ASLGKLLEKIGVERFSV-VGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALV 167
L + ++ + ++ +G S G A A V +V+ S+ + +NE
Sbjct: 54 IWLPFMETELHCDEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDENERAS 111
Query: 168 KRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPL 227
+ + ++ D P
Sbjct: 112 GYFT-RPWQWEKIKANCPY---------------------------IVQFGSTDDPFLPW 143
Query: 228 KMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
K E+ + L +L + H E L + K+ L+
Sbjct: 144 KEQQEVADRLE--TKLHKFTDCGHFQNTEFHELITVV-KSLLK 183
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 Length = 251 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 5e-05
Identities = 31/197 (15%), Positives = 53/197 (26%), Gaps = 57/197 (28%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLI--------FFGHSTTRSIQRTEL 105
P VL+HG G + Q+ P + P FF + +L
Sbjct: 62 APLFVLLHGTGGDE-NQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDL 120
Query: 106 FQAAS-----LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR 160
+A + E +G S G + ++ PE + V+
Sbjct: 121 ERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHP------ 174
Query: 161 GDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGD 220
++P VLI G+
Sbjct: 175 ------------------LIPFEPKISPAKPTR-------------------RVLITAGE 197
Query: 221 QDQIFPLKMATELKELL 237
+D I P+++ L+E L
Sbjct: 198 RDPICPVQLTKALEESL 214
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} Length = 367 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 9e-05
Identities = 43/262 (16%), Positives = 79/262 (30%), Gaps = 61/262 (23%)
Query: 47 DDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ---- 101
+ + P++V+ FG Q A F D + G S +
Sbjct: 89 KNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASP 148
Query: 102 --RTELFQAA-SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158
TE F AA LL ++ ER V+G G +A + A +RV K V+ S+ +M
Sbjct: 149 DINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALN-AVAVDKRV-KAVVTSTMYDM 206
Query: 159 KRG------------DNEALVKRANLER--------------------IDHLMLPESASQ 186
R +++ +R + L +
Sbjct: 207 TRVMSKGYNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDY 266
Query: 187 LRTLTGL-----------AVSKNLDIVPDFFFNDFVHD-----VLIVWGDQDQIFPLKMA 230
T G ++ L + ++ + +L++ G++ +
Sbjct: 267 YMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILT-YIKEISPRPILLIHGERAHSRY--FS 323
Query: 231 TELKELLGKKARLEIIENTSHV 252
+ L I+ SHV
Sbjct: 324 ETAYAAAAEPKELLIVPGASHV 345
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} Length = 377 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 1e-04
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 113 KLLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEK-VVIASSG 155
+L++ +G+ R +V+G S GG +A A +P VE+ + + ++
Sbjct: 138 ELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNP 182
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 Length = 377 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 107 QAASLGKLLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEK-VVIASSG 155
LLE +G+ +++G S+GG A A +P+ ++ V + SS
Sbjct: 139 IVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSI 189
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 Length = 366 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 2e-04
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 107 QAASLGKLLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEK-VVIASS 154
+ L+E +G+E+ F V G S GG A + +P + +V+AS+
Sbjct: 130 MVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMAST 179
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* Length = 444 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 113 KLLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEK-VVIASSG 155
++L+++GV + +VVG S GG A PE V K V IA+S
Sbjct: 191 QVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSC 235
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} Length = 208 | Back alignment and structure |
|---|
Score = 40.0 bits (93), Expect = 3e-04
Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 6/57 (10%)
Query: 201 IVPDFFFNDFVH------DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSH 251
+ P F+ F LIV GDQD++ P + + ++ SH
Sbjct: 134 VAPPVFYEGFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASH 190
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 Length = 262 | Back alignment and structure |
|---|
Score = 39.3 bits (91), Expect = 7e-04
Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 18/119 (15%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNV--YVPDLIFFGHSTTRSI--QRTELFQAA- 109
++V+ GF ++ + + P +V + +TT R +A
Sbjct: 55 GAVVISPGFT-----AYQSSIAWLGPRLASQGFV--VFTIDTNTTLDQPDSRGRQLLSAL 107
Query: 110 ----SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE 164
+ ++ R V+G S GG + A+ + K I +G N + E
Sbjct: 108 DYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKS-RTSL-KAAIPLTGWNTDKTWPE 164
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A Length = 303 | Back alignment and structure |
|---|
Score = 39.1 bits (91), Expect = 8e-04
Identities = 38/257 (14%), Positives = 71/257 (27%), Gaps = 42/257 (16%)
Query: 33 DDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW--RKQVQFFAPH-----FNVY 85
+ + + + T + P V +HG WQ + V
Sbjct: 65 EGRQLVDVFYSE----KTTNQAPLFVFVHGGY----WQEMDMSMSCSIVGPLVRRGYRVA 116
Query: 86 VPDLIFFGHSTTRSIQRTELFQA-ASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE 144
V D T + + + E V + G G + + M P
Sbjct: 117 VMDYNLCPQVTLEQLMT-QFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQIL-MRPN 174
Query: 145 RVE-------KVVIASSGVNMKRGDNEALVKRANLERIDHLML-PESASQLRTLTGLAVS 196
+ +I GV D L ++ + L L + + +
Sbjct: 175 VITAQRSKMVWALIFLCGVY----DLRELSNLESVNPKNILGLNERNIESVSPMLWEYTD 230
Query: 197 KNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVP 253
+ +V + D ++ + ++L G KA + + H
Sbjct: 231 VTVWNSTKI---------YVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHFD 281
Query: 254 QIENPGLFNSIVKNFLR 270
IE + +S V FLR
Sbjct: 282 IIEETAIDDSDVSRFLR 298
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 273 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 100.0 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 100.0 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 100.0 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 100.0 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 100.0 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 100.0 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 100.0 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 100.0 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 100.0 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 100.0 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 100.0 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 100.0 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 100.0 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 100.0 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 100.0 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 100.0 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 100.0 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 100.0 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 100.0 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 100.0 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 100.0 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 100.0 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 100.0 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 100.0 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.98 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.98 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.98 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.97 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.97 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.97 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.97 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.97 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.97 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.97 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.97 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.97 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.97 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.97 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.96 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.96 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.96 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.96 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.96 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.96 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.96 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.96 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.96 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.96 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.96 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.96 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.96 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.96 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.95 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.95 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.95 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.95 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.95 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.95 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.95 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.95 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.95 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.95 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.95 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.95 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.95 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.95 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.95 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.95 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.95 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.95 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.95 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.94 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.94 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.94 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.94 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.94 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.94 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.94 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.94 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.94 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.94 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.94 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.94 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.94 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.93 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.93 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.93 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.93 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.93 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.93 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.93 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.93 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.93 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.93 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.93 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.93 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.92 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.92 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.92 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.92 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.92 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.92 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.91 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.91 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.91 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.91 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.91 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.91 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.91 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.9 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.9 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.9 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.9 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.9 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.9 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.9 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.89 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.89 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.89 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.89 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.89 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.88 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.88 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.88 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.88 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.88 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.87 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.87 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.86 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.86 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.86 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.85 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.85 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.85 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.85 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.84 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.81 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.8 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.8 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.8 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.8 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.78 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.78 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.78 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.77 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.77 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.76 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.76 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.76 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.75 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.74 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.73 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.72 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.72 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.71 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.7 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.7 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.67 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.65 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.64 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.62 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.6 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.57 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.54 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.51 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.42 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.33 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.31 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 99.21 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 99.16 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 99.12 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 99.11 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 99.06 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 99.02 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.94 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.92 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.91 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.87 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.84 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.82 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.79 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.73 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.69 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.62 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 98.59 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 98.58 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 98.54 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.48 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.47 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 98.44 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.43 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 98.4 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 98.07 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.96 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.93 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 97.91 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.8 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.58 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 97.24 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 97.15 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 97.1 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 96.92 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.85 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 96.85 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 96.85 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.81 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.61 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 96.59 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 96.56 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 96.56 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 96.52 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 96.47 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 96.08 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 95.15 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 94.48 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 92.99 | |
| 4amm_A | 401 | DYNE8; transferase; 1.40A {Micromonospora chersina | 86.11 | |
| 2qub_A | 615 | Extracellular lipase; beta roll, alpha/beta hydrol | 81.58 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=245.45 Aligned_cols=234 Identities=19% Similarity=0.269 Sum_probs=176.3
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHH
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
..+...||.+++|...| .+++|+|||+||++.+. ..|..+++.|+++|+|+++|+||||.|+.+...++.+++
T Consensus 7 ~~~~~~~g~~l~y~~~G------~~~~p~lvl~hG~~~~~-~~w~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~ 79 (266)
T 3om8_A 7 SFLATSDGASLAYRLDG------AAEKPLLALSNSIGTTL-HMWDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLARL 79 (266)
T ss_dssp EEEECTTSCEEEEEEES------CTTSCEEEEECCTTCCG-GGGGGGHHHHHTTCEEEEECCTTSTTSCCCCSCCCHHHH
T ss_pred eEEeccCCcEEEEEecC------CCCCCEEEEeCCCccCH-HHHHHHHHHhhcCcEEEEEcCCCCCCCCCCCCCCCHHHH
Confidence 44555599999999987 44678999999999998 899999999998899999999999999987777899999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc-hHH-Hhhhh---hhh-----hhhh
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD-NEA-LVKRA---NLE-----RIDH 177 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-~~~-~~~~~---~~~-----~~~~ 177 (273)
++++.+++++++.++++++||||||.+|+.+|.++|++|+++|++++........ ... ..... ... ....
T Consensus 80 a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (266)
T 3om8_A 80 GEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMSETAAGFLGN 159 (266)
T ss_dssp HHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHccccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998865433211 000 00000 000 0000
Q ss_pred ccC----CCChHHHHHHhhhhhcc-----------CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcE
Q 024042 178 LML----PESASQLRTLTGLAVSK-----------NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKAR 242 (273)
Q Consensus 178 ~~~----~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 242 (273)
.+. ................. .........+.++..|+|+|+|++|.++|.+..+.+.+.+ ++.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~i-p~a~ 238 (266)
T 3om8_A 160 WFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASI-AGAR 238 (266)
T ss_dssp HSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTCE
T ss_pred hcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCE
Confidence 000 00011111110000000 0000112235667779999999999999999999999999 9999
Q ss_pred EEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 243 LEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 243 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
+++++ +||+++.|+|+++.+.|.+||+
T Consensus 239 ~~~i~-~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 239 LVTLP-AVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp EEEES-CCSCHHHHCHHHHHHHHHHHHT
T ss_pred EEEeC-CCCCccccCHHHHHHHHHHHhc
Confidence 99998 8999999999999999999996
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=237.01 Aligned_cols=236 Identities=19% Similarity=0.257 Sum_probs=174.6
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHH
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
..+++ +|.+++|+..| +.+..+|+|||+||++++. ..|..+++.|+++|+|+++|+||||.|..+...++.+++
T Consensus 5 ~~~~~-~g~~l~y~~~g----~~~~~~~~vvllHG~~~~~-~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 78 (266)
T 2xua_A 5 PYAAV-NGTELHYRIDG----ERHGNAPWIVLSNSLGTDL-SMWAPQVAALSKHFRVLRYDTRGHGHSEAPKGPYTIEQL 78 (266)
T ss_dssp CEEEC-SSSEEEEEEES----CSSSCCCEEEEECCTTCCG-GGGGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCCHHHH
T ss_pred CeEEE-CCEEEEEEEcC----CccCCCCeEEEecCccCCH-HHHHHHHHHHhcCeEEEEecCCCCCCCCCCCCCCCHHHH
Confidence 35666 89999999987 2112278999999999998 899999999988899999999999999977667899999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc-hHHHhhhh---hhhh-----hhhc
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD-NEALVKRA---NLER-----IDHL 178 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-~~~~~~~~---~~~~-----~~~~ 178 (273)
++++.+++++++.++++++||||||.+|+.+|.++|++|+++|++++........ ........ .... ....
T Consensus 79 ~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (266)
T 2xua_A 79 TGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHALADAVLPRW 158 (266)
T ss_dssp HHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999875432210 00000000 0000 0000
Q ss_pred cCC----CChHHHHHHhhhhhccC-----------CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEE
Q 024042 179 MLP----ESASQLRTLTGLAVSKN-----------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARL 243 (273)
Q Consensus 179 ~~~----~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 243 (273)
+.. ..+.....+........ ........+.++..|+|+++|++|.++|.+..+.+.+.+ ++.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~-~~~~~ 237 (266)
T 2xua_A 159 FTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAI-AGARY 237 (266)
T ss_dssp SCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTCEE
T ss_pred cCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHhC-CCCEE
Confidence 000 00000000000000000 000112234567779999999999999999999999999 89999
Q ss_pred EEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 244 EIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 244 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
++++ +||+++.++|+++.+.|.+||++
T Consensus 238 ~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 238 VELD-ASHISNIERADAFTKTVVDFLTE 264 (266)
T ss_dssp EEES-CCSSHHHHTHHHHHHHHHHHHTC
T ss_pred EEec-CCCCchhcCHHHHHHHHHHHHHh
Confidence 9999 99999999999999999999975
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=234.12 Aligned_cols=228 Identities=19% Similarity=0.272 Sum_probs=167.9
Q ss_pred EEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC-ccccHHHHHHHHHHHHH
Q 024042 38 LHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS-IQRTELFQAASLGKLLE 116 (273)
Q Consensus 38 l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~~~~ 116 (273)
|+|...+ +..+++|+|||+||++++. ..|..+++.|+++|+|+++|+||||.|..+. ..++.+++++++.++++
T Consensus 3 i~y~~~g----~~~~~~~~vvllHG~~~~~-~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~ 77 (268)
T 3v48_A 3 MKLSLSP----PPYADAPVVVLISGLGGSG-SYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALV 77 (268)
T ss_dssp SCCEECC----CSSTTCCEEEEECCTTCCG-GGGHHHHHHHHTTSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHH
T ss_pred eEEEecC----CCCCCCCEEEEeCCCCccH-HHHHHHHHHHhhcCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHH
Confidence 6677766 3345689999999999999 9999999999888999999999999998654 35799999999999999
Q ss_pred HhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHh------hhhhhhhh----hhccCC-----
Q 024042 117 KIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALV------KRANLERI----DHLMLP----- 181 (273)
Q Consensus 117 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~------~~~~~~~~----~~~~~~----- 181 (273)
.++.++++++||||||.+|+.+|.++|++++++|++++............. .......+ .....+
T Consensus 78 ~l~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (268)
T 3v48_A 78 AAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMA 157 (268)
T ss_dssp HTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HcCCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhh
Confidence 999999999999999999999999999999999999986543321110000 00000000 000000
Q ss_pred CChHHHHHHhhhhhcc-------------CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCC
Q 024042 182 ESASQLRTLTGLAVSK-------------NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIEN 248 (273)
Q Consensus 182 ~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (273)
................ .........+.++.+|+|+|+|++|.++|.+.++.+.+.+ ++.+++++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~-p~~~~~~~~~ 236 (268)
T 3v48_A 158 ARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAAL-PDSQKMVMPY 236 (268)
T ss_dssp TTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHC-SSEEEEEESS
T ss_pred cccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhC-CcCeEEEeCC
Confidence 0000000000000000 0000112234567779999999999999999999999999 9999999999
Q ss_pred CCCCcCcCChhhHHHHHHHHhcc
Q 024042 249 TSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 249 ~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+||+++.|+|+++.+.|.+||++
T Consensus 237 ~GH~~~~e~p~~~~~~i~~fl~~ 259 (268)
T 3v48_A 237 GGHACNVTDPETFNALLLNGLAS 259 (268)
T ss_dssp CCTTHHHHCHHHHHHHHHHHHHH
T ss_pred CCcchhhcCHHHHHHHHHHHHHH
Confidence 99999999999999999999975
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=236.02 Aligned_cols=232 Identities=19% Similarity=0.197 Sum_probs=170.2
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhH-hHHHHHHhhcCCCeEEeecCCCCCCCCC-CCc--ccc
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIW-QWRKQVQFFAPHFNVYVPDLIFFGHSTT-RSI--QRT 103 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~-~~~~~~~~l~~~~~v~~~d~~g~g~s~~-~~~--~~~ 103 (273)
..++. +|.+++|...| ..++|+|||+||++++. . .|..+++.|+++|+|+++|+||||.|.. +.. .++
T Consensus 6 ~~~~~-~g~~l~~~~~G------~~~~~~vvllHG~~~~~-~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~ 77 (286)
T 2yys_A 6 GYVPV-GEAELYVEDVG------PVEGPALFVLHGGPGGN-AYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDPRLFT 77 (286)
T ss_dssp EEEEC-SSCEEEEEEES------CTTSCEEEEECCTTTCC-SHHHHHHHGGGCTTSEEEEECCTTSTTSCCCCSCGGGCC
T ss_pred eEEeE-CCEEEEEEeec------CCCCCEEEEECCCCCcc-hhHHHHHHHHhcCCCEEEEECCCCCCCCCCCccCcccCc
Confidence 34555 89999999987 23568999999999998 8 8999999998779999999999999987 544 679
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHH----------------h
Q 024042 104 ELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL----------------V 167 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~----------------~ 167 (273)
.+++++++.+++++++.++++|+||||||.+|+.+|.++|+ ++++|++++....... .... .
T Consensus 78 ~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 155 (286)
T 2yys_A 78 VDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWL-AARLAEAAGLAPLPDPEENLK 155 (286)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHH-HHHHHHHTTCCCCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHH-HHHHHHHhccccchhHHHHHH
Confidence 99999999999999999999999999999999999999999 9999999986521110 0000 0
Q ss_pred hhhh---hhh-hhhc-cCCCC----hHHHHHHhhh----------hhccCCCCChhhHHhhhhccEEEEecCCCCCCChH
Q 024042 168 KRAN---LER-IDHL-MLPES----ASQLRTLTGL----------AVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLK 228 (273)
Q Consensus 168 ~~~~---~~~-~~~~-~~~~~----~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~ 228 (273)
.... ... .... ..... .......... .............+.++..|+|+++|++|.+++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~ 235 (286)
T 2yys_A 156 EALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGTSYPY 235 (286)
T ss_dssp HHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSCEEEEEETTCTTTTTT
T ss_pred HHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCCEEEEEeCCCCcCCHh
Confidence 0000 000 0000 00000 0000000000 00000001112234456679999999999999999
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 229 MATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.+.+.+ + +++++++++++||+.+.|+|+++.+.|.+||++.
T Consensus 236 -~~~~~~-~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 236 -AEEVAS-R-LRAPIRVLPEAGHYLWIDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp -HHHHHH-H-HTCCEEEETTCCSSHHHHCHHHHHHHHHHHHHTT
T ss_pred -HHHHHh-C-CCCCEEEeCCCCCCcChhhHHHHHHHHHHHHHhh
Confidence 999999 8 8999999999999999999999999999999763
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-37 Score=233.80 Aligned_cols=236 Identities=20% Similarity=0.307 Sum_probs=172.0
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc--
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI-- 100 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~-- 100 (273)
.+++...+++ +|.+++|...| ++|+|||+||++++. ..|..+++.|++.|+|+++|+||||.|+.+ .
T Consensus 7 ~~~~~~~~~~-~g~~l~y~~~G--------~g~~lvllHG~~~~~-~~w~~~~~~L~~~~~via~Dl~G~G~S~~~-~~~ 75 (294)
T 1ehy_A 7 EDFKHYEVQL-PDVKIHYVREG--------AGPTLLLLHGWPGFW-WEWSKVIGPLAEHYDVIVPDLRGFGDSEKP-DLN 75 (294)
T ss_dssp GGSCEEEEEC-SSCEEEEEEEE--------CSSEEEEECCSSCCG-GGGHHHHHHHHTTSEEEEECCTTSTTSCCC-CTT
T ss_pred CCcceeEEEE-CCEEEEEEEcC--------CCCEEEEECCCCcch-hhHHHHHHHHhhcCEEEecCCCCCCCCCCC-ccc
Confidence 4556677777 89999999875 457999999999998 999999999988899999999999999976 4
Q ss_pred ---cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc----------hHH--
Q 024042 101 ---QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD----------NEA-- 165 (273)
Q Consensus 101 ---~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~----------~~~-- 165 (273)
.++.+++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|+++++....... ...
T Consensus 76 ~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (294)
T 1ehy_A 76 DLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQF 155 (294)
T ss_dssp CGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHH
T ss_pred cccCcCHHHHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEe
Confidence 58999999999999999999999999999999999999999999999999999743211100 000
Q ss_pred ----Hhhhh--h--------hhhhhh-ccC---CCChHHHHHHhhhhh---------------c-cCCCCChhhHHhhhh
Q 024042 166 ----LVKRA--N--------LERIDH-LML---PESASQLRTLTGLAV---------------S-KNLDIVPDFFFNDFV 211 (273)
Q Consensus 166 ----~~~~~--~--------~~~~~~-~~~---~~~~~~~~~~~~~~~---------------~-~~~~~~~~~~~~~~~ 211 (273)
+.... . ...+.. ... ............... . ..........+.++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 235 (294)
T 1ehy_A 156 HQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSD 235 (294)
T ss_dssp TTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBC
T ss_pred cCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCC
Confidence 00000 0 000000 000 011111111110000 0 000000001233677
Q ss_pred ccEEEEecCCCCCCC-hHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 212 HDVLIVWGDQDQIFP-LKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 212 ~p~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
+|+|+++|++|.++| .+..+.+.+.+ +++++++++++||+++.|+|+++.+.|.+||+
T Consensus 236 ~P~Lvi~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 294 (294)
T 1ehy_A 236 LPVTMIWGLGDTCVPYAPLIEFVPKYY-SNYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 294 (294)
T ss_dssp SCEEEEEECCSSCCTTHHHHHHHHHHB-SSEEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred CCEEEEEeCCCCCcchHHHHHHHHHHc-CCCceEEeCCCCCChhhhCHHHHHHHHHHHhC
Confidence 899999999999998 46777888887 89999999999999999999999999999984
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-37 Score=231.48 Aligned_cols=237 Identities=21% Similarity=0.345 Sum_probs=171.9
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-cc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI-QR 102 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~-~~ 102 (273)
..+++++ +|.+++|...| ++|+|||+||++.+. ...|..+++.|+++|+|+++|+||||.|+.+.. .+
T Consensus 6 ~~~~~~~-~g~~l~y~~~G--------~g~~vvllHG~~~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~ 76 (282)
T 1iup_A 6 IGKSILA-AGVLTNYHDVG--------EGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNY 76 (282)
T ss_dssp CCEEEEE-TTEEEEEEEEC--------CSSEEEEECCCCTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCC
T ss_pred ccceEEE-CCEEEEEEecC--------CCCeEEEECCCCCCccHHHHHHHHHHhhccCCEEEEECCCCCCCCCCCCCCCC
Confidence 3466777 89999999875 357899999987543 147888888897779999999999999987653 57
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH--HHhhh----hhhhhh-
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE--ALVKR----ANLERI- 175 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~--~~~~~----~~~~~~- 175 (273)
+.+++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.......... ..... ......
T Consensus 77 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (282)
T 1iup_A 77 SKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLL 156 (282)
T ss_dssp CHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcCCCcHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999986542211100 00000 000000
Q ss_pred hhccCC---CChHHHHHHhh------------hhhccC-C-----CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHH
Q 024042 176 DHLMLP---ESASQLRTLTG------------LAVSKN-L-----DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELK 234 (273)
Q Consensus 176 ~~~~~~---~~~~~~~~~~~------------~~~~~~-~-----~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~ 234 (273)
...... ........... ...... . .......+.++..|+|+++|++|.++|.+.++.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~ 236 (282)
T 1iup_A 157 DIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLG 236 (282)
T ss_dssp HHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHH
T ss_pred HHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHHHHHH
Confidence 000000 00111110000 000000 0 00011345667779999999999999999999999
Q ss_pred HHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 235 ELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 235 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+.+ ++.++++++++||+.+.|+|+++.+.|.+||++.
T Consensus 237 ~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 273 (282)
T 1iup_A 237 ELI-DRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEA 273 (282)
T ss_dssp HHC-TTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred HhC-CCCeEEEECCCCCCccccCHHHHHHHHHHHHhcC
Confidence 999 8999999999999999999999999999999763
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=239.08 Aligned_cols=239 Identities=15% Similarity=0.225 Sum_probs=173.7
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcccc
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
.++..++++ +|.+++|...| ++.+|+|||+||++++. ..|..+++.|+++|+|+++|+||||.|+.+...++
T Consensus 6 ~~~~~~~~~-~g~~l~y~~~G------~g~~~pvvllHG~~~~~-~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~ 77 (316)
T 3afi_E 6 EIEIRRAPV-LGSSMAYRETG------AQDAPVVLFLHGNPTSS-HIWRNILPLVSPVAHCIAPDLIGFGQSGKPDIAYR 77 (316)
T ss_dssp ----CEEEE-TTEEEEEEEES------CTTSCEEEEECCTTCCG-GGGTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCC
T ss_pred cccceeEEe-CCEEEEEEEeC------CCCCCeEEEECCCCCch-HHHHHHHHHHhhCCEEEEECCCCCCCCCCCCCCCC
Confidence 344566777 88999999986 22335999999999999 99999999998889999999999999987666789
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC---CCcc-------------hHHHh
Q 024042 104 ELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM---KRGD-------------NEALV 167 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~---~~~~-------------~~~~~ 167 (273)
.+++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.... .... .....
T Consensus 78 ~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (316)
T 3afi_E 78 FFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVF 157 (316)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHH
Confidence 9999999999999999999999999999999999999999999999999874321 0000 00000
Q ss_pred hhhhhh-----------hhhh-c-----cCCCChHHHHHHhhhh-----------hccCCC--CC----------hhhHH
Q 024042 168 KRANLE-----------RIDH-L-----MLPESASQLRTLTGLA-----------VSKNLD--IV----------PDFFF 207 (273)
Q Consensus 168 ~~~~~~-----------~~~~-~-----~~~~~~~~~~~~~~~~-----------~~~~~~--~~----------~~~~~ 207 (273)
...... .+.. . ...........+.... +..... .. ....+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 237 (316)
T 3afi_E 158 RKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAAL 237 (316)
T ss_dssp HHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHH
T ss_pred HHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHHHHhh
Confidence 000000 0000 0 0001111111111100 000000 00 01123
Q ss_pred hhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 208 NDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 208 ~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.++.+|+|+++|++|.++|.+..+.+.+.+ ++.++++++++||+++.|+|+++.+.|.+||++
T Consensus 238 ~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 300 (316)
T 3afi_E 238 AASSYPKLLFTGEPGALVSPEFAERFAASL-TRCALIRLGAGLHYLQEDHADAIGRSVAGWIAG 300 (316)
T ss_dssp HHCCSCEEEEEEEECSSSCHHHHHHHHHHS-SSEEEEEEEEECSCHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCCeEEEecCCCCccCHHHHHHHHHhC-CCCeEEEcCCCCCCchhhCHHHHHHHHHHHHhh
Confidence 356779999999999999999999999999 899999999999999999999999999999975
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-37 Score=233.75 Aligned_cols=234 Identities=24% Similarity=0.374 Sum_probs=173.1
Q ss_pred EEecCCc-ceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-ccc
Q 024042 29 TIDIDDE-TTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI-QRT 103 (273)
Q Consensus 29 ~~~~~~g-~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~-~~~ 103 (273)
.+++ +| .+++|...| ++++|+|||+||++ ++. ..|..+++.|+++|+|+++|+||||.|+.+.. .++
T Consensus 17 ~~~~-~g~~~l~y~~~G------~g~~~~vvllHG~~pg~~~~-~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~ 88 (291)
T 2wue_A 17 EVDV-DGPLKLHYHEAG------VGNDQTVVLLHGGGPGAASW-TNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQF 88 (291)
T ss_dssp EEES-SSEEEEEEEEEC------TTCSSEEEEECCCCTTCCHH-HHTTTTHHHHTTTSEEEEECCTTSTTSCCCSCCSSH
T ss_pred EEEe-CCcEEEEEEecC------CCCCCcEEEECCCCCccchH-HHHHHHHHHHHhcCEEEEECCCCCCCCCCCCCCCcC
Confidence 6777 88 999999886 33346999999997 666 88999999998889999999999999987655 678
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC------cc-hHHHhhhh------
Q 024042 104 ELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR------GD-NEALVKRA------ 170 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~------~~-~~~~~~~~------ 170 (273)
.+++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...... .. ........
T Consensus 89 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (291)
T 2wue_A 89 NRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRE 168 (291)
T ss_dssp HHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHSCCHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhccCCHH
Confidence 999999999999999999999999999999999999999999999999998653221 00 01111000
Q ss_pred hhhhhhh-ccCC---CChHHHHH-------------Hhhhh--hccCCCCChh--hHHhhhhccEEEEecCCCCCCChHH
Q 024042 171 NLERIDH-LMLP---ESASQLRT-------------LTGLA--VSKNLDIVPD--FFFNDFVHDVLIVWGDQDQIFPLKM 229 (273)
Q Consensus 171 ~~~~~~~-~~~~---~~~~~~~~-------------~~~~~--~~~~~~~~~~--~~~~~~~~p~l~i~g~~D~~~~~~~ 229 (273)
....... .... ........ ..... .......... ..+.++.+|+|+++|++|.++|.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~ 248 (291)
T 2wue_A 169 NLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDG 248 (291)
T ss_dssp HHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSSCGGG
T ss_pred HHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCCCHHH
Confidence 0000000 0000 00111111 00000 0000000011 3456677899999999999999999
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 230 ATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+.+.+.+ +++++++++++||+++.++|+++.+.|.+||++
T Consensus 249 ~~~~~~~~-p~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 249 ALVALKTI-PRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp GHHHHHHS-TTEEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred HHHHHHHC-CCCeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 99999999 899999999999999999999999999999975
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-37 Score=229.02 Aligned_cols=237 Identities=18% Similarity=0.232 Sum_probs=171.3
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcccc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
++..++++ +|.+++|...+ ++.++|||+||++++....|..+++.|.+. |+|+++|+||||.|..+...++
T Consensus 2 ~~~~~~~~-~g~~l~~~~~g-------~~~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~ 73 (254)
T 2ocg_A 2 VTSAKVAV-NGVQLHYQQTG-------EGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFP 73 (254)
T ss_dssp CEEEEEEE-TTEEEEEEEEE-------CCSEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCCCCC
T ss_pred CceeEEEE-CCEEEEEEEec-------CCCCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCCCCC
Confidence 35567777 89999998875 234689999999888327899999999887 9999999999999986654455
Q ss_pred ---HHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhh------
Q 024042 104 ---ELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLER------ 174 (273)
Q Consensus 104 ---~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~------ 174 (273)
..+.++++.+++++++.++++++||||||.+|+.+|.++|++++++|++++....................
T Consensus 74 ~~~~~~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (254)
T 2ocg_A 74 ADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTR 153 (254)
T ss_dssp TTHHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHHHHhH
Confidence 67788999999999999999999999999999999999999999999998865332110000000000000
Q ss_pred --hhhccCCC-ChHHHHHHh---hhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCC
Q 024042 175 --IDHLMLPE-SASQLRTLT---GLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIEN 248 (273)
Q Consensus 175 --~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (273)
........ .......+. ...............+.++..|+|+++|++|.++|.+..+.+.+.+ ++.+++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~ 232 (254)
T 2ocg_A 154 KPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHV-KGSRLHLMPE 232 (254)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS-TTCEEEEETT
T ss_pred HHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhC-CCCEEEEcCC
Confidence 00000000 000000000 0000000011123345677889999999999999999999999998 8999999999
Q ss_pred CCCCcCcCChhhHHHHHHHHhc
Q 024042 249 TSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 249 ~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
+||+.+.++|+++.+.|.+||+
T Consensus 233 ~gH~~~~e~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 233 GKHNLHLRFADEFNKLAEDFLQ 254 (254)
T ss_dssp CCTTHHHHTHHHHHHHHHHHHC
T ss_pred CCCchhhhCHHHHHHHHHHHhC
Confidence 9999999999999999999984
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-37 Score=231.69 Aligned_cols=235 Identities=21% Similarity=0.340 Sum_probs=173.1
Q ss_pred eeEEecCC-c---ceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHH-HhhcCCCeEEeecCCCCCCCCCC
Q 024042 27 SQTIDIDD-E---TTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQV-QFFAPHFNVYVPDLIFFGHSTTR 98 (273)
Q Consensus 27 ~~~~~~~~-g---~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~-~~l~~~~~v~~~d~~g~g~s~~~ 98 (273)
.+.+++.+ | .+++|...| ++|+|||+||++ ++. ..|..++ +.|+++|+|+++|+||||.|+.+
T Consensus 10 ~~~~~~~~~g~~~~~l~y~~~G--------~g~~vvllHG~~~~~~~~-~~w~~~~~~~L~~~~~vi~~D~~G~G~S~~~ 80 (286)
T 2puj_A 10 SKFVKINEKGFSDFNIHYNEAG--------NGETVIMLHGGGPGAGGW-SNYYRNVGPFVDAGYRVILKDSPGFNKSDAV 80 (286)
T ss_dssp EEEEEECSTTCSSEEEEEEEEC--------CSSEEEEECCCSTTCCHH-HHHTTTHHHHHHTTCEEEEECCTTSTTSCCC
T ss_pred ceEEEecCCCcceEEEEEEecC--------CCCcEEEECCCCCCCCcH-HHHHHHHHHHHhccCEEEEECCCCCCCCCCC
Confidence 45677732 7 899999876 257999999997 666 7899999 99988899999999999999876
Q ss_pred Cc-cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC--c--c---hHHHhhhh
Q 024042 99 SI-QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR--G--D---NEALVKRA 170 (273)
Q Consensus 99 ~~-~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~--~--~---~~~~~~~~ 170 (273)
.. .++.+++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...... . . ........
T Consensus 81 ~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T 2puj_A 81 VMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLY 160 (286)
T ss_dssp CCSSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHh
Confidence 55 578999999999999999999999999999999999999999999999999998653211 0 0 01010000
Q ss_pred ------hhhhh-hhccCC---CChHHHHHHhh--------------hhhccC-CCCChhhHHhhhhccEEEEecCCCCCC
Q 024042 171 ------NLERI-DHLMLP---ESASQLRTLTG--------------LAVSKN-LDIVPDFFFNDFVHDVLIVWGDQDQIF 225 (273)
Q Consensus 171 ------~~~~~-~~~~~~---~~~~~~~~~~~--------------~~~~~~-~~~~~~~~~~~~~~p~l~i~g~~D~~~ 225 (273)
..... ...... ........... ...... ..+.....+.++..|+|+++|++|.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~ 240 (286)
T 2puj_A 161 AEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFV 240 (286)
T ss_dssp HSCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSS
T ss_pred hCCcHHHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCcc
Confidence 00000 000000 00111111000 000000 011122345667789999999999999
Q ss_pred ChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 226 PLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
|.+..+.+.+.+ +++++++++++||+.+.|+|+++.+.|.+||++
T Consensus 241 p~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 241 PLDHGLKLLWNI-DDARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp CTHHHHHHHHHS-SSEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHC-CCCeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 999999999999 899999999999999999999999999999975
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-37 Score=231.43 Aligned_cols=233 Identities=18% Similarity=0.201 Sum_probs=166.2
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
++...||.+++|...| ++++|||+||++++. ..|..+++.|.+. |+|+++|+||||.|+.+...++.+.+
T Consensus 2 ~~~~~~g~~l~y~~~G--------~g~~vvllHG~~~~~-~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 72 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWG--------SGKPVLFSHGWLLDA-DMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTF 72 (271)
T ss_dssp EEECTTSCEEEEEEES--------SSSEEEEECCTTCCG-GGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHH
T ss_pred eEEcCCCCEEEEEccC--------CCCeEEEECCCCCcH-HHHHHHHHHHHhCCceEEEecCCCCccCCCCCCCCCHHHH
Confidence 4566799999999986 457899999999999 9999999999765 99999999999999987777899999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHh-CCcccceEEEecCCCCCCCc-------chHHHhhhhh--------
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARM-WPERVEKVVIASSGVNMKRG-------DNEALVKRAN-------- 171 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~~~~v~~~v~~~~~~~~~~~-------~~~~~~~~~~-------- 171 (273)
++++.+++++++.++++++||||||.+++.++.. .|++++++|++++....... ..........
T Consensus 73 a~d~~~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (271)
T 3ia2_A 73 ADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRA 152 (271)
T ss_dssp HHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHHhhHH
Confidence 9999999999999999999999999877666555 48999999999875432110 0000000000
Q ss_pred --hhhh----hhcc--CCCChHHHHHHhhhhhccC-----------CCCChhhHHhhhhccEEEEecCCCCCCChHHH-H
Q 024042 172 --LERI----DHLM--LPESASQLRTLTGLAVSKN-----------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMA-T 231 (273)
Q Consensus 172 --~~~~----~~~~--~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~-~ 231 (273)
.... .... ................... ........+.++.+|+|+++|++|.++|.+.. +
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p~~~~~~ 232 (271)
T 3ia2_A 153 QFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGK 232 (271)
T ss_dssp HHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTCSSSCGGGTHH
T ss_pred HHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCCCcCChHHHHH
Confidence 0000 0000 0000110000000000000 00011223456778999999999999999874 4
Q ss_pred HHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 232 ELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+.+.. +++++++++++||+++.++|+++.+.|.+||++
T Consensus 233 ~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 233 VAAELI-KGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp HHHHHS-TTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHhC-CCceEEEEcCCCCcccccCHHHHHHHHHHHhhC
Confidence 455556 899999999999999999999999999999974
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=229.78 Aligned_cols=236 Identities=25% Similarity=0.378 Sum_probs=172.6
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-cc
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI-QR 102 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~-~~ 102 (273)
.+.+++ +|.+++|...| +.+.|+|||+||++ ++. ..|..+++.|+++|+|+++|+||||.|..+.. .+
T Consensus 9 ~~~~~~-~g~~l~y~~~g------~~g~p~vvllHG~~~~~~~~-~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~ 80 (285)
T 1c4x_A 9 EKRFPS-GTLASHALVAG------DPQSPAVVLLHGAGPGAHAA-SNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPG 80 (285)
T ss_dssp EEEECC-TTSCEEEEEES------CTTSCEEEEECCCSTTCCHH-HHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCS
T ss_pred ceEEEE-CCEEEEEEecC------CCCCCEEEEEeCCCCCCcch-hhHHHHHHHHhhCcEEEEecCCCCCCCCCCCCccc
Confidence 456666 88999999875 23345599999997 566 78999999998889999999999999986654 57
Q ss_pred cHHHH----HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH---HHhhhhh----
Q 024042 103 TELFQ----AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE---ALVKRAN---- 171 (273)
Q Consensus 103 ~~~~~----~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~---~~~~~~~---- 171 (273)
+.+++ ++++.+++++++.++++|+||||||.+|+.+|.++|++++++|++++.......... .......
T Consensus 81 ~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (285)
T 1c4x_A 81 HIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRL 160 (285)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCH
T ss_pred chhhhhhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHhccccH
Confidence 88888 999999999999999999999999999999999999999999999986542211011 0100000
Q ss_pred --hhhh-hhccC-CC----ChHHHHHHhh------------hhh--ccC-C--CCChhhHHhhhhccEEEEecCCCCCCC
Q 024042 172 --LERI-DHLML-PE----SASQLRTLTG------------LAV--SKN-L--DIVPDFFFNDFVHDVLIVWGDQDQIFP 226 (273)
Q Consensus 172 --~~~~-~~~~~-~~----~~~~~~~~~~------------~~~--~~~-~--~~~~~~~~~~~~~p~l~i~g~~D~~~~ 226 (273)
.... ..... +. .......... ... ... . .......+.++..|+|+++|++|.++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p 240 (285)
T 1c4x_A 161 TPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVP 240 (285)
T ss_dssp HHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSC
T ss_pred HHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCeeeC
Confidence 0000 00000 00 0011110000 000 000 0 111234456777899999999999999
Q ss_pred hHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 227 LKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+..+.+.+.+ ++.++++++++||+++.++|+++.+.|.+||++
T Consensus 241 ~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 241 LDTSLYLTKHL-KHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp THHHHHHHHHC-SSEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhC-CCceEEEeCCCCcchhhcCHHHHHHHHHHHHhc
Confidence 99999999998 899999999999999999999999999999975
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-37 Score=230.77 Aligned_cols=235 Identities=17% Similarity=0.207 Sum_probs=170.9
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
+++..+|.+++|...+ ..++|+|||+||++++. ..|..+++.|.+. |+|+++|+||||.|..+...++.+++
T Consensus 3 ~~~~~~g~~l~y~~~g------~~~~~~vvllHG~~~~~-~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 75 (276)
T 1zoi_A 3 YVTTKDGVQIFYKDWG------PRDAPVIHFHHGWPLSA-DDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDGHDMDHY 75 (276)
T ss_dssp EEECTTSCEEEEEEES------CTTSCEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHH
T ss_pred eEECCCCcEEEEEecC------CCCCCeEEEECCCCcch-hHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCHHHH
Confidence 4666699999999886 33567999999999998 8999999999876 99999999999999876666899999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC-CcccceEEEecCCCCCCC-------cchHHHh----hhhh----
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKR-------GDNEALV----KRAN---- 171 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~~~v~~~v~~~~~~~~~~-------~~~~~~~----~~~~---- 171 (273)
++|+.+++++++.++++|+||||||.+|+.++.++ |++|+++|++++...... ....... ....
T Consensus 76 ~~d~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (276)
T 1zoi_A 76 ADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRA 155 (276)
T ss_dssp HHHHHHHHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999999988877 999999999997542210 0000100 0000
Q ss_pred --hhhhh--hccC------CCChHHHHHHhhhhhc-----------cCCCCChhhHHhhhhccEEEEecCCCCCCChH-H
Q 024042 172 --LERID--HLML------PESASQLRTLTGLAVS-----------KNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLK-M 229 (273)
Q Consensus 172 --~~~~~--~~~~------~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~-~ 229 (273)
...+. .... ................ ..........+.++..|+|+++|++|.++|.+ .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~ 235 (276)
T 1zoi_A 156 QFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENS 235 (276)
T ss_dssp HHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTCSSSCSTTT
T ss_pred HHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCCEEEEEcCCCcccChHHH
Confidence 00000 0000 0111111111110000 00011122345677789999999999999987 4
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 230 ATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+.+.+.+ ++.++++++++||+++.++|+++.+.|.+||++
T Consensus 236 ~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 276 (276)
T 1zoi_A 236 GVLSAKLL-PNGALKTYKGYPHGMPTTHADVINADLLAFIRS 276 (276)
T ss_dssp HHHHHHHS-TTEEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHHhhC-CCceEEEcCCCCCchhhhCHHHHHHHHHHHhcC
Confidence 56666677 899999999999999999999999999999964
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=237.01 Aligned_cols=237 Identities=16% Similarity=0.193 Sum_probs=173.0
Q ss_pred CCceeEEecCCc----ceEEeecCCccCCCCCCC-CCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCC
Q 024042 24 GLSSQTIDIDDE----TTLHFWGPKLEDDHKTLK-KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTT 97 (273)
Q Consensus 24 ~~~~~~~~~~~g----~~l~~~~~~~~~~~~~~~-~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~ 97 (273)
.++.+++++ +| .+++|...| ..+ +|+|||+||++++. ..|+.+++.|++. |+|+++|+||||.|+.
T Consensus 19 ~~~~~~~~~-~g~~~g~~l~y~~~G------~~~~g~~vvllHG~~~~~-~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~ 90 (310)
T 1b6g_A 19 PFSPNYLDD-LPGYPGLRAHYLDEG------NSDAEDVFLCLHGEPTWS-YLYRKMIPVFAESGARVIAPDFFGFGKSDK 90 (310)
T ss_dssp CCCCEEEES-CTTCTTCEEEEEEEE------CTTCSCEEEECCCTTCCG-GGGTTTHHHHHHTTCEEEEECCTTSTTSCE
T ss_pred CCCceEEEe-cCCccceEEEEEEeC------CCCCCCEEEEECCCCCch-hhHHHHHHHHHhCCCeEEEeCCCCCCCCCC
Confidence 456678888 66 899999986 234 68999999999998 8999999999987 9999999999999986
Q ss_pred CC--ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC-----------cc--
Q 024042 98 RS--IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR-----------GD-- 162 (273)
Q Consensus 98 ~~--~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~-----------~~-- 162 (273)
+. ..++.+.+++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...... ..
T Consensus 91 ~~~~~~y~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~ 170 (310)
T 1b6g_A 91 PVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPAD 170 (310)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTT
T ss_pred CCCcCCcCHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccch
Confidence 65 3579999999999999999999999999999999999999999999999999998552100 00
Q ss_pred -hHHHhhhhh-hh-----h-hhhccCCCChHHHHHHhhh---------------hhccCCC------CChhhHHh-hhhc
Q 024042 163 -NEALVKRAN-LE-----R-IDHLMLPESASQLRTLTGL---------------AVSKNLD------IVPDFFFN-DFVH 212 (273)
Q Consensus 163 -~~~~~~~~~-~~-----~-~~~~~~~~~~~~~~~~~~~---------------~~~~~~~------~~~~~~~~-~~~~ 212 (273)
......... .. . ...............+... ....... ......+. ++.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 250 (310)
T 1b6g_A 171 GFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNG 250 (310)
T ss_dssp THHHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHhccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccC
Confidence 000100000 00 0 0000000011111110000 0000000 00012344 7788
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEe--CCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLGKKARLEII--ENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
|+|+|+|++|.++| +..+.+.+.+ ++.+++++ +++||+++. +|+++.+.|.+||++
T Consensus 251 P~Lvi~G~~D~~~~-~~~~~~~~~i-p~~~~~~i~~~~~GH~~~~-~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 251 QTFMAIGMKDKLLG-PDVMYPMKAL-INGCPEPLEIADAGHFVQE-FGEQVAREALKHFAE 308 (310)
T ss_dssp EEEEEEETTCSSSS-HHHHHHHHHH-STTCCCCEEETTCCSCGGG-GHHHHHHHHHHHHHH
T ss_pred ceEEEeccCcchhh-hHHHHHHHhc-ccccceeeecCCcccchhh-ChHHHHHHHHHHHhc
Confidence 99999999999999 8889999999 88888877 999999999 999999999999975
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=228.51 Aligned_cols=229 Identities=18% Similarity=0.168 Sum_probs=170.1
Q ss_pred CCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHH
Q 024042 33 DDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASL 111 (273)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 111 (273)
.+|.+++|...+ ++++|||+||++++. ..|..+++.|++. |+|+++|+||||.|+.+...++.+++++++
T Consensus 10 ~~g~~l~y~~~g--------~g~pvvllHG~~~~~-~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl 80 (277)
T 1brt_A 10 STSIDLYYEDHG--------TGQPVVLIHGFPLSG-HSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADL 80 (277)
T ss_dssp TEEEEEEEEEEC--------SSSEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred CCCcEEEEEEcC--------CCCeEEEECCCCCcH-HHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCCCccHHHHHHHH
Confidence 488899998875 345799999999998 9999999999886 999999999999999877678999999999
Q ss_pred HHHHHHhCCccEEEEEeccchHHHHHHHHhCCc-ccceEEEecCCCCCCCc--------chHHHh----hhhh------h
Q 024042 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE-RVEKVVIASSGVNMKRG--------DNEALV----KRAN------L 172 (273)
Q Consensus 112 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~-~v~~~v~~~~~~~~~~~--------~~~~~~----~~~~------~ 172 (273)
.+++++++.++++|+||||||.+|+.+|.++|+ +|+++|++++....... ...... .... .
T Consensus 81 ~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (277)
T 1brt_A 81 NTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFY 160 (277)
T ss_dssp HHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHhCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhH
Confidence 999999999999999999999999999999998 99999999974332100 000000 0000 0
Q ss_pred hhhh-hcc-------CCCChHHHHHHhhhhh----------ccCCCCChhhHHhhhhccEEEEecCCCCCCChHHH-HHH
Q 024042 173 ERID-HLM-------LPESASQLRTLTGLAV----------SKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMA-TEL 233 (273)
Q Consensus 173 ~~~~-~~~-------~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~-~~~ 233 (273)
.... ..+ ................ ...........+.++..|+|+++|++|.++|.+.. +.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~ 240 (277)
T 1brt_A 161 TGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVF 240 (277)
T ss_dssp HHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHH
T ss_pred HHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCChHHHHHHH
Confidence 0000 000 0111111111111000 00001111224566778999999999999999888 889
Q ss_pred HHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 234 KELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 234 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+.+ +++++++++++||+++.++|+++.+.|.+||++
T Consensus 241 ~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 241 HKAL-PSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp HHHC-TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHHC-CCCcEEEeCCCCcchhhhCHHHHHHHHHHHHhC
Confidence 8888 899999999999999999999999999999964
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=225.58 Aligned_cols=238 Identities=18% Similarity=0.297 Sum_probs=170.0
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC--ccc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS--IQR 102 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~--~~~ 102 (273)
++...+...+|.+++|...++ . .++++|||+||++++. ..|..+++.|+++|+|+++|+||||.|.... ..+
T Consensus 5 ~~~~~~~~~~g~~l~~~~~g~----~-~~~~~vvllHG~~~~~-~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~ 78 (285)
T 3bwx_A 5 YEDRYWTSSDGLRLHFRAYEG----D-ISRPPVLCLPGLTRNA-RDFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTY 78 (285)
T ss_dssp SEEEEEECTTSCEEEEEEECB----C-TTSCCEEEECCTTCCG-GGGHHHHHHHBBTBCEEEECCTTBTTSCCCSSGGGC
T ss_pred cccCeeecCCCceEEEEEcCC----C-CCCCcEEEECCCCcch-hhHHHHHHHhhcCCEEEeecCCCCCCCCCCCCcccc
Confidence 445666667999999999872 1 1268999999999998 9999999999989999999999999998653 357
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhh------------
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA------------ 170 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~------------ 170 (273)
+.+++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++................
T Consensus 79 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (285)
T 3bwx_A 79 QPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHA 158 (285)
T ss_dssp SHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESSHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHHhcCCcccccHHHH
Confidence 89999999999999999999999999999999999999999999999998754322110000000000
Q ss_pred --hhhhhh-hccCCCChHHHHHHhhhhhc----------------cCC--------CCChhhHHhhh-hccEEEEecCCC
Q 024042 171 --NLERID-HLMLPESASQLRTLTGLAVS----------------KNL--------DIVPDFFFNDF-VHDVLIVWGDQD 222 (273)
Q Consensus 171 --~~~~~~-~~~~~~~~~~~~~~~~~~~~----------------~~~--------~~~~~~~~~~~-~~p~l~i~g~~D 222 (273)
...... ..+...............+. ... .........++ ..|+|+++|++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D 238 (285)
T 3bwx_A 159 ARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETS 238 (285)
T ss_dssp HHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEEEETTC
T ss_pred HHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEEEeCCC
Confidence 000000 00111111111111110000 000 00001123444 679999999999
Q ss_pred CCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 223 QIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+++.+..+.+.+. +++++++++++||+++.++|+.+ +.|.+||++
T Consensus 239 ~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 239 DILSAQTAAKMASR--PGVELVTLPRIGHAPTLDEPESI-AAIGRLLER 284 (285)
T ss_dssp SSSCHHHHHHHHTS--TTEEEEEETTCCSCCCSCSHHHH-HHHHHHHTT
T ss_pred CccCHHHHHHHHhC--CCcEEEEeCCCCccchhhCchHH-HHHHHHHHh
Confidence 99999988888766 78999999999999999999877 579999975
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=232.41 Aligned_cols=237 Identities=14% Similarity=0.192 Sum_probs=170.8
Q ss_pred CCceeEEecCCc----ceEEeecCCccCCCCCCC-CCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCC
Q 024042 24 GLSSQTIDIDDE----TTLHFWGPKLEDDHKTLK-KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTT 97 (273)
Q Consensus 24 ~~~~~~~~~~~g----~~l~~~~~~~~~~~~~~~-~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~ 97 (273)
.++.+++++ +| .+++|...| ..+ +|+|||+||++++. ..|+.+++.|++. |+|+++|+||||.|+.
T Consensus 18 ~~~~~~~~~-~g~~~g~~l~y~~~G------~~~~g~~vvllHG~~~~~-~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~ 89 (297)
T 2xt0_A 18 PYAPHYLEG-LPGFEGLRMHYVDEG------PRDAEHTFLCLHGEPSWS-FLYRKMLPVFTAAGGRVVAPDLFGFGRSDK 89 (297)
T ss_dssp CCCCEEECC-CTTCTTCCEEEEEES------CTTCSCEEEEECCTTCCG-GGGTTTHHHHHHTTCEEEEECCTTSTTSCE
T ss_pred CCccEEEec-cCCCCceEEEEEEcc------CCCCCCeEEEECCCCCcc-eeHHHHHHHHHhCCcEEEEeCCCCCCCCCC
Confidence 445677887 66 899999986 234 68999999999998 8999999999887 9999999999999986
Q ss_pred CCc--cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc-ch--HHHhhhhhh
Q 024042 98 RSI--QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG-DN--EALVKRANL 172 (273)
Q Consensus 98 ~~~--~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~-~~--~~~~~~~~~ 172 (273)
+.. .++.+++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++....... .. ..+......
T Consensus 90 ~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 169 (297)
T 2xt0_A 90 PTDDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVAN 169 (297)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHT
T ss_pred CCCcccCCHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhhc
Confidence 543 5799999999999999999999999999999999999999999999999999985421111 10 000000000
Q ss_pred -h------hhhhccCCCChHHHHHHhhh-----------hhccCCC---C--------ChhhHHh-hhhccEEEEecCCC
Q 024042 173 -E------RIDHLMLPESASQLRTLTGL-----------AVSKNLD---I--------VPDFFFN-DFVHDVLIVWGDQD 222 (273)
Q Consensus 173 -~------~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~---~--------~~~~~~~-~~~~p~l~i~g~~D 222 (273)
. ................+... .+..... . .....+. ++.+|+|+|+|++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D 249 (297)
T 2xt0_A 170 SPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQD 249 (297)
T ss_dssp CTTCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTC
T ss_pred ccccchhHHHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCC
Confidence 0 00000000011111111000 0000000 0 0112345 77889999999999
Q ss_pred CCCChHHHHHHHHHhcCCcEEEE--eCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 223 QIFPLKMATELKELLGKKARLEI--IENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.++| +..+.+.+.+ ++.++.+ ++++||+++. +|+++.+.|.+||++
T Consensus 250 ~~~~-~~~~~~~~~~-p~~~~~~~~~~~~GH~~~~-~p~~~~~~i~~fl~~ 297 (297)
T 2xt0_A 250 PVLG-PEVMGMLRQA-IRGCPEPMIVEAGGHFVQE-HGEPIARAALAAFGQ 297 (297)
T ss_dssp SSSS-HHHHHHHHHH-STTCCCCEEETTCCSSGGG-GCHHHHHHHHHHTTC
T ss_pred cccC-hHHHHHHHhC-CCCeeEEeccCCCCcCccc-CHHHHHHHHHHHHhC
Confidence 9999 8888899888 7776554 7899999999 999999999999964
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=230.91 Aligned_cols=236 Identities=19% Similarity=0.296 Sum_probs=173.3
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI- 100 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~- 100 (273)
...+.+++ +|.+++|...| ++++|||+||++ ++. ..|..+++.|++.|+|+++|+||||.|. +..
T Consensus 16 ~~~~~~~~-~g~~l~y~~~g--------~g~~vvllHG~~~~~~~~-~~~~~~~~~L~~~~~vi~~Dl~G~G~S~-~~~~ 84 (296)
T 1j1i_A 16 YVERFVNA-GGVETRYLEAG--------KGQPVILIHGGGAGAESE-GNWRNVIPILARHYRVIAMDMLGFGKTA-KPDI 84 (296)
T ss_dssp CEEEEEEE-TTEEEEEEEEC--------CSSEEEEECCCSTTCCHH-HHHTTTHHHHTTTSEEEEECCTTSTTSC-CCSS
T ss_pred CcceEEEE-CCEEEEEEecC--------CCCeEEEECCCCCCcchH-HHHHHHHHHHhhcCEEEEECCCCCCCCC-CCCC
Confidence 45667777 89999999875 357899999987 666 7899999999888999999999999998 443
Q ss_pred cccHHHHHHHHHHHHHHhCC-ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch--HHHhhh----hhhh
Q 024042 101 QRTELFQAASLGKLLEKIGV-ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN--EALVKR----ANLE 173 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~--~~~~~~----~~~~ 173 (273)
.++.+.+++++.++++.++. ++++|+||||||.+|+.+|.++|++++++|++++......... ...... ....
T Consensus 85 ~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (296)
T 1j1i_A 85 EYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMV 164 (296)
T ss_dssp CCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHHH
Confidence 67899999999999999998 8999999999999999999999999999999998653221100 000000 0000
Q ss_pred h-hhhccC-C--CChHHHHHH------------hhhhh----ccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHH
Q 024042 174 R-IDHLML-P--ESASQLRTL------------TGLAV----SKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATEL 233 (273)
Q Consensus 174 ~-~~~~~~-~--~~~~~~~~~------------~~~~~----~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~ 233 (273)
. ...... + ......... ..... .....+.....+.++.+|+|+++|++|.++|.+..+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~ 244 (296)
T 1j1i_A 165 HLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKF 244 (296)
T ss_dssp HHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHH
T ss_pred HHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHHH
Confidence 0 000000 0 001100000 00000 00011122334567778999999999999999999999
Q ss_pred HHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 234 KELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 234 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.+.+ ++.++++++++||+++.++|+++.+.|.+||+++
T Consensus 245 ~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 282 (296)
T 1j1i_A 245 LDLI-DDSWGYIIPHCGHWAMIEHPEDFANATLSFLSLR 282 (296)
T ss_dssp HHHC-TTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred HHHC-CCCEEEEECCCCCCchhcCHHHHHHHHHHHHhcc
Confidence 9999 8999999999999999999999999999999865
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=224.92 Aligned_cols=230 Identities=14% Similarity=0.199 Sum_probs=164.5
Q ss_pred eEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHH
Q 024042 37 TLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLE 116 (273)
Q Consensus 37 ~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~ 116 (273)
+++|...|+++ ..++|+|||+||++++. ..|..+++.|+++|+|+++|+||||.|.... .++.+++++++.++++
T Consensus 2 ~l~y~~~G~~~---~~~~~~vvllHG~~~~~-~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~-~~~~~~~a~dl~~~l~ 76 (255)
T 3bf7_A 2 KLNIRAQTAQN---QHNNSPIVLVHGLFGSL-DNLGVLARDLVNDHNIIQVDVRNHGLSPREP-VMNYPAMAQDLVDTLD 76 (255)
T ss_dssp CCCEEEECCSS---CCCCCCEEEECCTTCCT-TTTHHHHHHHTTTSCEEEECCTTSTTSCCCS-CCCHHHHHHHHHHHHH
T ss_pred ceeeeecCccc---cCCCCCEEEEcCCcccH-hHHHHHHHHHHhhCcEEEecCCCCCCCCCCC-CcCHHHHHHHHHHHHH
Confidence 46777776211 12578999999999998 8999999999888999999999999998654 5788999999999999
Q ss_pred HhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC-cchHHHhhhhh-h--------hhhhhccCC-CChH
Q 024042 117 KIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR-GDNEALVKRAN-L--------ERIDHLMLP-ESAS 185 (273)
Q Consensus 117 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~-~~~~~~~~~~~-~--------~~~~~~~~~-~~~~ 185 (273)
.++.++++|+||||||.+|+.+|.++|++++++|++++...... ........... . ......+.. ....
T Consensus 77 ~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
T 3bf7_A 77 ALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEE 156 (255)
T ss_dssp HHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCH
T ss_pred HcCCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchh
Confidence 99999999999999999999999999999999999875432211 10111110000 0 000000000 0001
Q ss_pred HHHHHhhhhhccC-CCCChhh------------HHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCC
Q 024042 186 QLRTLTGLAVSKN-LDIVPDF------------FFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHV 252 (273)
Q Consensus 186 ~~~~~~~~~~~~~-~~~~~~~------------~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 252 (273)
............. ....... ...++.+|+|+++|++|.+++.+..+.+.+.+ +++++++++++||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~ 235 (255)
T 3bf7_A 157 GVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF-PQARAHVIAGAGHW 235 (255)
T ss_dssp HHHHHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHC-TTEEECCBTTCCSC
T ss_pred HHHHHHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHC-CCCeEEEeCCCCCc
Confidence 1111111000000 0000000 02355679999999999999999999999988 89999999999999
Q ss_pred cCcCChhhHHHHHHHHhccc
Q 024042 253 PQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 253 ~~~~~~~~~~~~i~~fl~~~ 272 (273)
++.|+|+++.+.|.+||+++
T Consensus 236 ~~~e~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 236 VHAEKPDAVLRAIRRYLNDH 255 (255)
T ss_dssp HHHHCHHHHHHHHHHHHHTC
T ss_pred cccCCHHHHHHHHHHHHhcC
Confidence 99999999999999999875
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=227.77 Aligned_cols=235 Identities=21% Similarity=0.195 Sum_probs=169.5
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
+++..+|.+++|...+ ..++++|||+||++++. ..|..+++.|.+. |+|+++|+||||.|..+...++.+++
T Consensus 2 ~~~~~~g~~l~y~~~g------~~~~~~vvllHG~~~~~-~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 74 (275)
T 1a88_A 2 TVTTSDGTNIFYKDWG------PRDGLPVVFHHGWPLSA-DDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTY 74 (275)
T ss_dssp EEECTTSCEEEEEEES------CTTSCEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHH
T ss_pred eEEccCCCEEEEEEcC------CCCCceEEEECCCCCch-hhHHHHHHHHHHCCceEEEEcCCcCCCCCCCCCCCCHHHH
Confidence 4566799999999886 33567999999999998 8999999999876 99999999999999877667899999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC-CcccceEEEecCCCCCCC-------cchHHHh----hhhh----
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKR-------GDNEALV----KRAN---- 171 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~~~v~~~v~~~~~~~~~~-------~~~~~~~----~~~~---- 171 (273)
++++.+++++++.++++++||||||.+|+.++.++ |++++++|++++...... ....... ....
T Consensus 75 ~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (275)
T 1a88_A 75 AADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRA 154 (275)
T ss_dssp HHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHhhhHH
Confidence 99999999999999999999999999999988776 999999999987542210 0000100 0000
Q ss_pred --hhhhhh-c-cC------CCChHHHHHHhhhhhcc-----------CCCCChhhHHhhhhccEEEEecCCCCCCChH-H
Q 024042 172 --LERIDH-L-ML------PESASQLRTLTGLAVSK-----------NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLK-M 229 (273)
Q Consensus 172 --~~~~~~-~-~~------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~-~ 229 (273)
...... . .. ................. .........+.++..|+|+++|++|.++|.+ .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 234 (275)
T 1a88_A 155 QFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADA 234 (275)
T ss_dssp HHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCSTTT
T ss_pred HHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCEEEEecCCCccCCcHHH
Confidence 000000 0 00 01111111111100000 0000112335567789999999999999987 4
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 230 ATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+.+.+.. +++++++++++||+++.++|+++.+.|.+||++
T Consensus 235 ~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 235 APKSAELL-ANATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp HHHHHHHS-TTEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred HHHHHhhC-CCcEEEEcCCCCccHHHhCHHHHHHHHHHHhhC
Confidence 45566666 899999999999999999999999999999964
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=226.97 Aligned_cols=234 Identities=20% Similarity=0.158 Sum_probs=170.3
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH-HHHhhcCC-CeEEeecCCCCCCCCC--C-Cc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK-QVQFFAPH-FNVYVPDLIFFGHSTT--R-SI 100 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~-~~~~l~~~-~~v~~~d~~g~g~s~~--~-~~ 100 (273)
+..+++. +|.+++|...| +.++|+|||+||++++. ..|.. +++.|++. |+|+++|+||||.|.. + ..
T Consensus 2 ~~~~~~~-~g~~l~y~~~G------~~~~~~vvllHG~~~~~-~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~ 73 (298)
T 1q0r_A 2 SERIVPS-GDVELWSDDFG------DPADPALLLVMGGNLSA-LGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAH 73 (298)
T ss_dssp CEEEEEE-TTEEEEEEEES------CTTSCEEEEECCTTCCG-GGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTS
T ss_pred CCceecc-CCeEEEEEecc------CCCCCeEEEEcCCCCCc-cchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcC
Confidence 4566776 89999999886 34568999999999998 88976 55889887 9999999999999986 2 33
Q ss_pred cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCC-CC-------------------CC
Q 024042 101 QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV-NM-------------------KR 160 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~-~~-------------------~~ 160 (273)
.++.+++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++.. .. ..
T Consensus 74 ~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (298)
T 1q0r_A 74 PYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPG 153 (298)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCC
T ss_pred CcCHHHHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhccccc
Confidence 57999999999999999999999999999999999999999999999999998765 21 00
Q ss_pred cchHHHhhhhh-------hhh----h----hh---ccCCCChHHHHHHhhhhh----------cc---C-CCCChhhH-H
Q 024042 161 GDNEALVKRAN-------LER----I----DH---LMLPESASQLRTLTGLAV----------SK---N-LDIVPDFF-F 207 (273)
Q Consensus 161 ~~~~~~~~~~~-------~~~----~----~~---~~~~~~~~~~~~~~~~~~----------~~---~-~~~~~~~~-~ 207 (273)
.....+..... ... . .. ...+.............+ .. . ........ +
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (298)
T 1q0r_A 154 PQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAEL 233 (298)
T ss_dssp CCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGG
T ss_pred ccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCcccccccc
Confidence 00111100000 000 0 00 001112221111111000 00 0 00011223 5
Q ss_pred hhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 208 NDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 208 ~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.++..|+|+++|++|.++|.+..+.+.+.+ +++++++++++|| +.|+++.+.|.+||++.
T Consensus 234 ~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH----e~p~~~~~~i~~fl~~~ 293 (298)
T 1q0r_A 234 REVTVPTLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGH----ALPSSVHGPLAEVILAH 293 (298)
T ss_dssp GGCCSCEEEEEETTCSSSCTTHHHHHHHTS-TTEEEEEETTCCS----SCCGGGHHHHHHHHHHH
T ss_pred cccCCCEEEEEeCCCccCCHHHHHHHHHhC-CCCEEEEcCCCCC----CCcHHHHHHHHHHHHHH
Confidence 677889999999999999999999999988 8999999999999 77899999999999753
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=230.53 Aligned_cols=240 Identities=18% Similarity=0.268 Sum_probs=180.2
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccc
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQR 102 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~ 102 (273)
..++.+.+++ +|.+++|...+ .+++|+|||+||++++. ..|..+.+.|+++|+|+++|+||+|.|......+
T Consensus 8 ~~~~~~~~~~-~g~~l~~~~~g------~~~~~~vl~lHG~~~~~-~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~ 79 (299)
T 3g9x_A 8 FPFDPHYVEV-LGERMHYVDVG------PRDGTPVLFLHGNPTSS-YLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDY 79 (299)
T ss_dssp CCCCCEEEEE-TTEEEEEEEES------CSSSCCEEEECCTTCCG-GGGTTTHHHHTTTSCEEEECCTTSTTSCCCCCCC
T ss_pred cccceeeeee-CCeEEEEEecC------CCCCCEEEEECCCCccH-HHHHHHHHHHccCCEEEeeCCCCCCCCCCCCCcc
Confidence 3467788888 89999999987 44578999999999999 8999999999888999999999999999887788
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc-----hHHHhhhhhhhh---
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD-----NEALVKRANLER--- 174 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-----~~~~~~~~~~~~--- 174 (273)
+.++.++++.+++++++.++++++|||+||.+|+.+|.++|++++++|++++........ ............
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (299)
T 3g9x_A 80 FFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVGR 159 (299)
T ss_dssp CHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSSSHHH
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCCCcch
Confidence 999999999999999999999999999999999999999999999999999554433110 011110000000
Q ss_pred -------------hhhcc-CCCChHHHHHHhhhhhcc-------------CCCC----------ChhhHHhhhhccEEEE
Q 024042 175 -------------IDHLM-LPESASQLRTLTGLAVSK-------------NLDI----------VPDFFFNDFVHDVLIV 217 (273)
Q Consensus 175 -------------~~~~~-~~~~~~~~~~~~~~~~~~-------------~~~~----------~~~~~~~~~~~p~l~i 217 (273)
..... .................. .... .....+.++..|++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i 239 (299)
T 3g9x_A 160 ELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLF 239 (299)
T ss_dssp HHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred hhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCCCCeEEE
Confidence 00000 011111111111100000 0000 0111235566799999
Q ss_pred ecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 218 WGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 218 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+|++|.++|.+..+.+.+.+ +++++++++++||+++.++|+++.+.|.+++.+
T Consensus 240 ~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~ 292 (299)
T 3g9x_A 240 WGTPGVLIPPAEAARLAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPA 292 (299)
T ss_dssp EEEECSSSCHHHHHHHHHHS-TTEEEEEEEEESSCHHHHCHHHHHHHHHHHSGG
T ss_pred ecCCCCCCCHHHHHHHHhhC-CCCeEEEeCCCCCcchhcCHHHHHHHHHHHHhh
Confidence 99999999999999999999 899999999999999999999999999999875
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-37 Score=231.28 Aligned_cols=229 Identities=20% Similarity=0.244 Sum_probs=164.8
Q ss_pred CCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHH
Q 024042 33 DDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASL 111 (273)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 111 (273)
.+|.+++|...| ++++|||+||++++. ..|..+++.|.+. |+|+++|+||||.|..+...++.+++++++
T Consensus 14 ~~g~~l~y~~~G--------~g~~vvllHG~~~~~-~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl 84 (281)
T 3fob_A 14 QAPIEIYYEDHG--------TGKPVVLIHGWPLSG-RSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTFTSDL 84 (281)
T ss_dssp TEEEEEEEEEES--------SSEEEEEECCTTCCG-GGGTTTHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred CCceEEEEEECC--------CCCeEEEECCCCCcH-HHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCccccCHHHHHHHH
Confidence 488999999886 357899999999998 8999999999665 999999999999999877778999999999
Q ss_pred HHHHHHhCCccEEEEEeccchHHHHHHHHh-CCcccceEEEecCCCCCCC-------c-chHHHhhhhh----------h
Q 024042 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARM-WPERVEKVVIASSGVNMKR-------G-DNEALVKRAN----------L 172 (273)
Q Consensus 112 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~~~~v~~~v~~~~~~~~~~-------~-~~~~~~~~~~----------~ 172 (273)
.+++++++.++++|+||||||.+++.++.. .|++++++|++++...... . .......... .
T Consensus 85 ~~ll~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (281)
T 3fob_A 85 HQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFL 164 (281)
T ss_dssp HHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHHH
Confidence 999999999999999999999988776665 4899999999987532210 0 0000000000 0
Q ss_pred hhh-hhccC-----CCChHHHHHHhhhhhccC------------CCCChhhHHhhhhccEEEEecCCCCCCChHHH-HHH
Q 024042 173 ERI-DHLML-----PESASQLRTLTGLAVSKN------------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMA-TEL 233 (273)
Q Consensus 173 ~~~-~~~~~-----~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~-~~~ 233 (273)
..+ ..... .................. ........+.++.+|+|+++|++|.++|.+.. +.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~ 244 (281)
T 3fob_A 165 DEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLT 244 (281)
T ss_dssp HHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHH
T ss_pred HHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHH
Confidence 000 00000 000011110000000000 00011233566777999999999999999865 666
Q ss_pred HHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 234 KELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 234 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+.+ +++++++++++||+++.++|+++.+.|.+||++
T Consensus 245 ~~~~-p~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 281 (281)
T 3fob_A 245 HEAI-PNSKVALIKGGPHGLNATHAKEFNEALLLFLKD 281 (281)
T ss_dssp HHHS-TTCEEEEETTCCTTHHHHTHHHHHHHHHHHHCC
T ss_pred HHhC-CCceEEEeCCCCCchhhhhHHHHHHHHHHHhhC
Confidence 7777 999999999999999999999999999999974
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=233.28 Aligned_cols=241 Identities=19% Similarity=0.236 Sum_probs=169.8
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCC--CCeEEEEcCCCCchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCC
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLK--KPSLVLIHGFGPEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTR 98 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~--~~~vi~~hG~~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~ 98 (273)
...+..++.+ +|.+++|...| +...+ +++|||+||++++. ..|...+..|.+ +|+|+++|+||||.|+..
T Consensus 26 ~~~~~~~v~~-~g~~l~y~~~G----~~~~~~~g~plvllHG~~~~~-~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~ 99 (330)
T 3nwo_A 26 MPVSSRTVPF-GDHETWVQVTT----PENAQPHALPLIVLHGGPGMA-HNYVANIAALADETGRTVIHYDQVGCGNSTHL 99 (330)
T ss_dssp ---CEEEEEE-TTEEEEEEEEC----CSSCCTTCCCEEEECCTTTCC-SGGGGGGGGHHHHHTCCEEEECCTTSTTSCCC
T ss_pred CcCcceeEee-cCcEEEEEEec----CccCCCCCCcEEEECCCCCCc-hhHHHHHHHhccccCcEEEEECCCCCCCCCCC
Confidence 3456778888 89999999987 21123 44899999998888 788888888874 699999999999999762
Q ss_pred C----ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc--hHHHhh----
Q 024042 99 S----IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD--NEALVK---- 168 (273)
Q Consensus 99 ~----~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~--~~~~~~---- 168 (273)
+ ..++.+.+++++.++++.++.++++|+||||||.+|+.+|.++|+++.++|+++++....... ...+..
T Consensus 100 ~~~~~~~~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 179 (330)
T 3nwo_A 100 PDAPADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPA 179 (330)
T ss_dssp TTSCGGGCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHHHHHHSCH
T ss_pred CCCccccccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHHHHHhcCH
Confidence 2 236889999999999999999999999999999999999999999999999998865421100 000000
Q ss_pred ----hhhh-------------h----hhhhcc--CCCChHHHHHHhhhh------h---c---------cCCCCChhhHH
Q 024042 169 ----RANL-------------E----RIDHLM--LPESASQLRTLTGLA------V---S---------KNLDIVPDFFF 207 (273)
Q Consensus 169 ----~~~~-------------~----~~~~~~--~~~~~~~~~~~~~~~------~---~---------~~~~~~~~~~~ 207 (273)
.... . ...... ............... + . ....+.....+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 259 (330)
T 3nwo_A 180 ETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRL 259 (330)
T ss_dssp HHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCBCGGGG
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccccCCchhhhc
Confidence 0000 0 000000 000111111100000 0 0 00011122345
Q ss_pred hhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 208 NDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 208 ~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.++..|+|+|+|++|.++| ...+.+.+.+ +++++++++++||+++.|+|+++.+.|.+||++
T Consensus 260 ~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~i-p~~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~~ 321 (330)
T 3nwo_A 260 PDVTAPVLVIAGEHDEATP-KTWQPFVDHI-PDVRSHVFPGTSHCTHLEKPEEFRAVVAQFLHQ 321 (330)
T ss_dssp GGCCSCEEEEEETTCSSCH-HHHHHHHHHC-SSEEEEEETTCCTTHHHHSHHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEeeCCCccCh-HHHHHHHHhC-CCCcEEEeCCCCCchhhcCHHHHHHHHHHHHHh
Confidence 5677799999999999876 4678888888 999999999999999999999999999999975
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=227.93 Aligned_cols=227 Identities=17% Similarity=0.225 Sum_probs=166.3
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-cccHHHHHHHHH
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI-QRTELFQAASLG 112 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~ 112 (273)
.+.+++|...| ++++|||+||++++. ..|..+++.|+++|+|+++|+||||.|..+.. .++.+++++++.
T Consensus 4 ~~~~~~y~~~G--------~g~~vvllHG~~~~~-~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~ 74 (269)
T 2xmz_A 4 THYKFYEANVE--------TNQVLVFLHGFLSDS-RTYHNHIEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITTLLD 74 (269)
T ss_dssp CSEEEECCSSC--------CSEEEEEECCTTCCG-GGGTTTHHHHHTTSEEEEECCTTSTTCCCCTTSCCCHHHHHHHHH
T ss_pred ccceEEEEEcC--------CCCeEEEEcCCCCcH-HHHHHHHHHHhhcCeEEEecCCCCCCCCCCCCCccCHHHHHHHHH
Confidence 35678888875 234799999999998 89999999998889999999999999987655 579999999999
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH--H------Hhhhh---hhhhhhh-c--
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE--A------LVKRA---NLERIDH-L-- 178 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~--~------~~~~~---~~~~~~~-~-- 178 (273)
+++++++.++++++||||||.+|+.+|.++|++|+++|++++.......... . ..... ....+.. .
T Consensus 75 ~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (269)
T 2xmz_A 75 RILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEK 154 (269)
T ss_dssp HHHGGGTTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTT
T ss_pred HHHHHcCCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999976543221100 0 00000 0000000 0
Q ss_pred ---cCC---CChHHHHHHhhh-----------h---hccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc
Q 024042 179 ---MLP---ESASQLRTLTGL-----------A---VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG 238 (273)
Q Consensus 179 ---~~~---~~~~~~~~~~~~-----------~---~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~ 238 (273)
+.. ............ . ............+.++.+|+++++|++|.+++.+..+ +.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~- 232 (269)
T 2xmz_A 155 LPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANLI- 232 (269)
T ss_dssp SGGGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHS-
T ss_pred CccccccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhC-
Confidence 000 011111111100 0 0000011112345677789999999999999887755 88878
Q ss_pred CCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 239 KKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 239 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+++++++++++||+++.++|+++.+.|.+||++
T Consensus 233 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 265 (269)
T 2xmz_A 233 PNSKCKLISATGHTIHVEDSDEFDTMILGFLKE 265 (269)
T ss_dssp TTEEEEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCCChhhcCHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999975
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=223.27 Aligned_cols=233 Identities=18% Similarity=0.191 Sum_probs=167.8
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
+++..+|.+++|...+ ++++|||+||++++. ..|..+++.|.+. |+|+++|+||||.|..+...++.+++
T Consensus 2 ~~~~~~g~~l~y~~~g--------~g~~vvllHG~~~~~-~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 72 (274)
T 1a8q_A 2 ICTTRDGVEIFYKDWG--------QGRPVVFIHGWPLNG-DAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTF 72 (274)
T ss_dssp EEECTTSCEEEEEEEC--------SSSEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHH
T ss_pred eEEccCCCEEEEEecC--------CCceEEEECCCcchH-HHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCcHHHH
Confidence 4666799999998875 457899999999998 8999999999876 99999999999999876667899999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC-CcccceEEEecCCCCCCC-------cchHHHh----hhhh----
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKR-------GDNEALV----KRAN---- 171 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~~~v~~~v~~~~~~~~~~-------~~~~~~~----~~~~---- 171 (273)
++++.+++++++.++++++||||||.+|+.++.++ |++|+++|++++...... ....... ....
T Consensus 73 ~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (274)
T 1a8q_A 73 ADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERS 152 (274)
T ss_dssp HHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHHHhhccHH
Confidence 99999999999999999999999999999988776 899999999987532110 0000000 0000
Q ss_pred --hhhhh-hccC------CCChHHHHHHhhhhhccC-----------CCCChhhHHhhhhccEEEEecCCCCCCChHH-H
Q 024042 172 --LERID-HLML------PESASQLRTLTGLAVSKN-----------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKM-A 230 (273)
Q Consensus 172 --~~~~~-~~~~------~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~-~ 230 (273)
..... .... .................. ........+.++..|+|+++|++|.++|.+. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 232 (274)
T 1a8q_A 153 QFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATG 232 (274)
T ss_dssp HHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTH
T ss_pred HHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecCcCCCCCcHHHH
Confidence 00000 0000 011111111111000000 0001123345677799999999999999884 4
Q ss_pred HHHHHHhcCCcEEEEeCCCCCCcCcC--ChhhHHHHHHHHhcc
Q 024042 231 TELKELLGKKARLEIIENTSHVPQIE--NPGLFNSIVKNFLRG 271 (273)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~ 271 (273)
+.+.+.. +++++++++++||+++.+ +|+++.+.|.+||++
T Consensus 233 ~~~~~~~-~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~~ 274 (274)
T 1a8q_A 233 RKSAQII-PNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp HHHHHHS-TTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred HHHHhhC-CCceEEEECCCCCceecccCCHHHHHHHHHHHhcC
Confidence 5566666 899999999999999999 999999999999964
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=226.15 Aligned_cols=233 Identities=19% Similarity=0.193 Sum_probs=168.2
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
+++..+|.+++|...+ ++|+|||+||++++. ..|..+++.|.+. |+|+++|+||||.|..+...++.+++
T Consensus 2 ~~~~~~g~~l~y~~~g--------~~~~vvllHG~~~~~-~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 72 (273)
T 1a8s_A 2 TFTTRDGTQIYYKDWG--------SGQPIVFSHGWPLNA-DSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTY 72 (273)
T ss_dssp EEECTTSCEEEEEEES--------CSSEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHH
T ss_pred eEecCCCcEEEEEEcC--------CCCEEEEECCCCCcH-HHHhhHHhhHhhCCcEEEEECCCCCCCCCCCCCCCCHHHH
Confidence 3566799999998875 457899999999998 8999999999876 99999999999999877667899999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC-CcccceEEEecCCCCCCC-------cchHHHh----hhhh----
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKR-------GDNEALV----KRAN---- 171 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~~~v~~~v~~~~~~~~~~-------~~~~~~~----~~~~---- 171 (273)
++++.+++++++.++++|+||||||.+|+.++.++ |++++++|++++...... ....... ....
T Consensus 73 ~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T 1a8s_A 73 ADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRS 152 (273)
T ss_dssp HHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhHhhHH
Confidence 99999999999999999999999999999977776 899999999987532210 0000100 0000
Q ss_pred --hhhhhh-cc-C------CCChHHHHHHhhhhhcc-----------CCCCChhhHHhhhhccEEEEecCCCCCCChH-H
Q 024042 172 --LERIDH-LM-L------PESASQLRTLTGLAVSK-----------NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLK-M 229 (273)
Q Consensus 172 --~~~~~~-~~-~------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~-~ 229 (273)
...... .. . ................. .........+.++..|+|+++|++|.++|.+ .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 232 (273)
T 1a8s_A 153 QLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEAS 232 (273)
T ss_dssp HHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCSTTT
T ss_pred HHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCEEEEECCCCccCChHHH
Confidence 000000 00 0 01111111111100000 0000112345667789999999999999988 4
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 230 ATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+.+.+.. +++++++++++||+++.++|+++.+.|.+||++
T Consensus 233 ~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 233 GIASAALV-KGSTLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp HHHHHHHS-TTCEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred HHHHHHhC-CCcEEEEeCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 55566666 899999999999999999999999999999964
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=224.11 Aligned_cols=234 Identities=17% Similarity=0.195 Sum_probs=164.1
Q ss_pred eEEecCCcceEEeecC--CccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHH
Q 024042 28 QTIDIDDETTLHFWGP--KLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTEL 105 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~--~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~ 105 (273)
..+++ +|.+++|... | .++|+|||+||++++. ..|..+++.|+++|+|+++|+||||.|+.+...++.+
T Consensus 7 ~~~~~-~g~~l~y~~~~~G-------~~~p~vvllHG~~~~~-~~w~~~~~~L~~~~rvia~DlrGhG~S~~~~~~~~~~ 77 (276)
T 2wj6_A 7 HETLV-FDNKLSYIDNQRD-------TDGPAILLLPGWCHDH-RVYKYLIQELDADFRVIVPNWRGHGLSPSEVPDFGYQ 77 (276)
T ss_dssp EEEEE-TTEEEEEEECCCC-------CSSCEEEEECCTTCCG-GGGHHHHHHHTTTSCEEEECCTTCSSSCCCCCCCCHH
T ss_pred eEEee-CCeEEEEEEecCC-------CCCCeEEEECCCCCcH-HHHHHHHHHHhcCCEEEEeCCCCCCCCCCCCCCCCHH
Confidence 34556 8999999987 4 2458999999999999 9999999999988999999999999998776678999
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC-CcccceEEEecCCCCCCCcch-HHHhhh---hh----hhh-h
Q 024042 106 FQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKRGDN-EALVKR---AN----LER-I 175 (273)
Q Consensus 106 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~~~v~~~v~~~~~~~~~~~~~-~~~~~~---~~----~~~-~ 175 (273)
++++|+.+++++++.++++|+||||||.+|+.+|.++ |++|+++|++++......... ...... .. ... .
T Consensus 78 ~~a~dl~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (276)
T 2wj6_A 78 EQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDPERWREGTHGLF 157 (276)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHCTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccCcchHHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999987532211100 000000 00 000 0
Q ss_pred hhccCC-CChHHHHHHhhhhhc--------------c--CCCCChhhHHhhhhccEEEEecCCCCCCC--hHHHHHHHHH
Q 024042 176 DHLMLP-ESASQLRTLTGLAVS--------------K--NLDIVPDFFFNDFVHDVLIVWGDQDQIFP--LKMATELKEL 236 (273)
Q Consensus 176 ~~~~~~-~~~~~~~~~~~~~~~--------------~--~~~~~~~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~~~~~ 236 (273)
...... ............... . .........+.++..|+++++|..|...+ ....+.+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~~~ 237 (276)
T 2wj6_A 158 DVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQ 237 (276)
T ss_dssp HHHHTTBCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHHHH
T ss_pred HHhhcccchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchhHHHHHHHHHhh
Confidence 000000 001000000000000 0 00001122345566799988874433222 2345677777
Q ss_pred hcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 237 LGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 237 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+ ++.++++++++||+++.|+|+++.+.|.+||++
T Consensus 238 ~-p~a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~ 271 (276)
T 2wj6_A 238 H-PWFSYAKLGGPTHFPAIDVPDRAAVHIREFATA 271 (276)
T ss_dssp C-TTEEEEECCCSSSCHHHHSHHHHHHHHHHHHHH
T ss_pred C-CCeEEEEeCCCCCcccccCHHHHHHHHHHHHhh
Confidence 7 899999999999999999999999999999974
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=227.31 Aligned_cols=237 Identities=20% Similarity=0.252 Sum_probs=174.3
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccc
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQR 102 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~ 102 (273)
.+++.+.+++ +|.+++|...| ++|+|||+||++++. ..|..+++.|.+.|+|+++|+||||.|..+...+
T Consensus 8 ~~~~~~~~~~-~g~~l~~~~~g--------~~~~vv~lHG~~~~~-~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~ 77 (301)
T 3kda_A 8 NGFESAYREV-DGVKLHYVKGG--------QGPLVMLVHGFGQTW-YEWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGY 77 (301)
T ss_dssp TTCEEEEEEE-TTEEEEEEEEE--------SSSEEEEECCTTCCG-GGGTTTHHHHTTTSEEEEECCTTSTTCCCCSSCS
T ss_pred cccceEEEee-CCeEEEEEEcC--------CCCEEEEECCCCcch-hHHHHHHHHHHhcCeEEEEcCCCCCCCCCCCCCc
Confidence 4567777777 99999999985 567999999999999 9999999999888999999999999999887778
Q ss_pred cHHHHHHHHHHHHHHhCCcc-EEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch------------------
Q 024042 103 TELFQAASLGKLLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN------------------ 163 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~------------------ 163 (273)
+.+++++++.+++++++.++ ++++|||+||.+|+.++.++|++++++|++++.........
T Consensus 78 ~~~~~~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (301)
T 3kda_A 78 SGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFF 157 (301)
T ss_dssp SHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHh
Confidence 99999999999999999888 99999999999999999999999999999998643221100
Q ss_pred -------HHHhhhhh---hhhhhhccC----CCChHHHHHHhhhhhc-----------cCCC----CChhhH--Hhhhhc
Q 024042 164 -------EALVKRAN---LERIDHLML----PESASQLRTLTGLAVS-----------KNLD----IVPDFF--FNDFVH 212 (273)
Q Consensus 164 -------~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~-----------~~~~----~~~~~~--~~~~~~ 212 (273)
........ ...+..... ................ .... ...... +.++..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 237 (301)
T 3kda_A 158 AADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQMPT 237 (301)
T ss_dssp HCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBCSCE
T ss_pred hcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhccccCc
Confidence 00000000 000000000 0011111111110000 0000 000000 015667
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
|+++++|++| ++.+..+.+.+.+ +++++++++++||+++.++|+++.+.|.+|+++.
T Consensus 238 P~l~i~G~~D--~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~ 294 (301)
T 3kda_A 238 MTLAGGGAGG--MGTFQLEQMKAYA-EDVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRG 294 (301)
T ss_dssp EEEEECSTTS--CTTHHHHHHHTTB-SSEEEEEETTCCSCHHHHTHHHHHHHHHHHHTTS
T ss_pred ceEEEecCCC--CChhHHHHHHhhc-ccCeEEEcCCCCcCchhhCHHHHHHHHHHHHhhC
Confidence 9999999999 6778888888888 8999999999999999999999999999999864
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-36 Score=225.53 Aligned_cols=234 Identities=19% Similarity=0.222 Sum_probs=175.1
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC--ccc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS--IQR 102 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~--~~~ 102 (273)
++.+++++ +|.+++|...+ ++|+|||+||++++. ..|..+++.|+++|+|+++|+||+|.|..+. ..+
T Consensus 3 ~~~~~~~~-~~~~~~y~~~g--------~~~~vv~~HG~~~~~-~~~~~~~~~L~~~~~vi~~d~~G~G~s~~~~~~~~~ 72 (278)
T 3oos_A 3 WTTNIIKT-PRGKFEYFLKG--------EGPPLCVTHLYSEYN-DNGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEY 72 (278)
T ss_dssp CEEEEEEE-TTEEEEEEEEC--------SSSEEEECCSSEECC-TTCCTTTGGGGGTSEEEEECCTTSTTSCCCSSGGGG
T ss_pred cccCcEec-CCceEEEEecC--------CCCeEEEEcCCCcch-HHHHHHHHHhhcCceEEEEcCCCCCCCCCCCCcccC
Confidence 56778888 77799999875 567999999999988 8899999999889999999999999998764 356
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC------------cchHHHhhhh
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR------------GDNEALVKRA 170 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~------------~~~~~~~~~~ 170 (273)
+.++.++++.++++.++.++++++|||+||.+|+.++.++|++++++|++++...... ..........
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (278)
T 3oos_A 73 SMTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIM 152 (278)
T ss_dssp SHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999876110 0000000000
Q ss_pred hhh---h-----------hhhccCCCChHHHHHHhhhhh--------------ccCCCCChhhHHhhhhccEEEEecCCC
Q 024042 171 NLE---R-----------IDHLMLPESASQLRTLTGLAV--------------SKNLDIVPDFFFNDFVHDVLIVWGDQD 222 (273)
Q Consensus 171 ~~~---~-----------~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~p~l~i~g~~D 222 (273)
... . ..................... .............++..|+++++|++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 232 (278)
T 3oos_A 153 NALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHD 232 (278)
T ss_dssp HHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTC
T ss_pred HhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccC
Confidence 000 0 000000000111111100000 000111223445667779999999999
Q ss_pred CCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHh
Q 024042 223 QIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFL 269 (273)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 269 (273)
.++|.+..+.+.+.+ +++++++++++||+.+.++|+++.+.|.+||
T Consensus 233 ~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 233 VQCPYIFSCEIANLI-PNATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp SSSCHHHHHHHHHHS-TTEEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHhhC-CCcEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 999999999999999 8999999999999999999999999999986
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=223.96 Aligned_cols=236 Identities=20% Similarity=0.327 Sum_probs=170.9
Q ss_pred eeEEecC-Cc--ceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHH-HhhcCCCeEEeecCCCCCCCCCCC
Q 024042 27 SQTIDID-DE--TTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQV-QFFAPHFNVYVPDLIFFGHSTTRS 99 (273)
Q Consensus 27 ~~~~~~~-~g--~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~-~~l~~~~~v~~~d~~g~g~s~~~~ 99 (273)
.+.+++. +| .+++|...+ . +.++|||+||++ .+. ..|..++ +.|.++|+|+++|+||||.|..+.
T Consensus 13 ~~~~~~~~~g~~~~l~y~~~g------~-g~~~vvllHG~~~~~~~~-~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 84 (289)
T 1u2e_A 13 SRFLNVEEAGKTLRIHFNDCG------Q-GDETVVLLHGSGPGATGW-ANFSRNIDPLVEAGYRVILLDCPGWGKSDSVV 84 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEEC------C-CSSEEEEECCCSTTCCHH-HHTTTTHHHHHHTTCEEEEECCTTSTTSCCCC
T ss_pred ceEEEEcCCCcEEEEEEeccC------C-CCceEEEECCCCcccchh-HHHHHhhhHHHhcCCeEEEEcCCCCCCCCCCC
Confidence 4566663 27 899999876 2 233899999997 555 7888888 888888999999999999998765
Q ss_pred c-cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc----c---hHHHhhhh-
Q 024042 100 I-QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG----D---NEALVKRA- 170 (273)
Q Consensus 100 ~-~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~----~---~~~~~~~~- 170 (273)
. .++.+++++++.+++++++.++++|+||||||.+|+.+|.++|++++++|++++....... . ........
T Consensus 85 ~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (289)
T 1u2e_A 85 NSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYR 164 (289)
T ss_dssp CSSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHh
Confidence 4 5788999999999999999999999999999999999999999999999999986532110 0 00110000
Q ss_pred -----hhhhhhh-ccC-C--CChHHHHH--------------HhhhhhccC-CCCChhhHHhhhhccEEEEecCCCCCCC
Q 024042 171 -----NLERIDH-LML-P--ESASQLRT--------------LTGLAVSKN-LDIVPDFFFNDFVHDVLIVWGDQDQIFP 226 (273)
Q Consensus 171 -----~~~~~~~-~~~-~--~~~~~~~~--------------~~~~~~~~~-~~~~~~~~~~~~~~p~l~i~g~~D~~~~ 226 (273)
....... ... + ........ ......... ........+.++..|+|+++|++|.++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 244 (289)
T 1u2e_A 165 QPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVP 244 (289)
T ss_dssp SCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSC
T ss_pred cchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccC
Confidence 0000000 000 0 00111110 000000000 0111223456677899999999999999
Q ss_pred hHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 227 LKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+..+.+.+.+ ++.++++++++||+.+.++|+++.+.|.+||++
T Consensus 245 ~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 245 MDAGLRLLSGI-AGSELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp THHHHHHHHHS-TTCEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhhC-CCcEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence 99999999999 899999999999999999999999999999975
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=222.81 Aligned_cols=238 Identities=17% Similarity=0.185 Sum_probs=180.8
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccc
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQR 102 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~ 102 (273)
..++.+.+++ +|.+++|...+ ++|+||++||++++. ..|..+++.|+++|.|+++|+||+|.|..+...+
T Consensus 46 ~~~~~~~~~~-~~~~~~~~~~g--------~~p~vv~lhG~~~~~-~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~ 115 (314)
T 3kxp_A 46 DHFISRRVDI-GRITLNVREKG--------SGPLMLFFHGITSNS-AVFEPLMIRLSDRFTTIAVDQRGHGLSDKPETGY 115 (314)
T ss_dssp -CCEEEEEEC-SSCEEEEEEEC--------CSSEEEEECCTTCCG-GGGHHHHHTTTTTSEEEEECCTTSTTSCCCSSCC
T ss_pred CCcceeeEEE-CCEEEEEEecC--------CCCEEEEECCCCCCH-HHHHHHHHHHHcCCeEEEEeCCCcCCCCCCCCCC
Confidence 3457778888 88899999876 278999999999998 8999999999888999999999999999777778
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh----------
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL---------- 172 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~---------- 172 (273)
+.+++++++.+++++++.++++++|||+||.+++.+|.++|++++++|++++..................
T Consensus 116 ~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (314)
T 3kxp_A 116 EANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIKA 195 (314)
T ss_dssp SHHHHHHHHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCHHH
Confidence 9999999999999999999999999999999999999999999999999998764432211111110000
Q ss_pred --hhhhhccCCCChHHHHHHhhhhhccC-------------------CCCChhhHHhhhhccEEEEecCCCCCCChHHHH
Q 024042 173 --ERIDHLMLPESASQLRTLTGLAVSKN-------------------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMAT 231 (273)
Q Consensus 173 --~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~ 231 (273)
.......................... ..........++..|+|+++|++|.++|.+..+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~~~~~ 275 (314)
T 3kxp_A 196 VEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALA 275 (314)
T ss_dssp HHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSCHHHHH
T ss_pred HHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCccCCHHHHH
Confidence 00000011111111111111110000 000223345667789999999999999999999
Q ss_pred HHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 232 ELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+.+.+ ++.++++++++||+.+.++|+++.+.|.+||++
T Consensus 276 ~~~~~~-~~~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 276 KTSRLR-PDLPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp HHHHHC-TTSCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred HHHHhC-CCceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 999999 899999999999999999999999999999974
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-35 Score=224.39 Aligned_cols=239 Identities=19% Similarity=0.238 Sum_probs=176.9
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCC-CCCCCCCccc
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFF-GHSTTRSIQR 102 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~-g~s~~~~~~~ 102 (273)
..+...+++ +|.+++|+..+ .+++|+||++||++++. ..|..+++.|+++|+|+++|+||+ |.|..+...+
T Consensus 44 ~~~~~~v~~-~~~~~~~~~~g------~~~~~~vv~lHG~~~~~-~~~~~~~~~L~~g~~vi~~D~~G~gG~s~~~~~~~ 115 (306)
T 2r11_A 44 RCKSFYIST-RFGQTHVIASG------PEDAPPLVLLHGALFSS-TMWYPNIADWSSKYRTYAVDIIGDKNKSIPENVSG 115 (306)
T ss_dssp CCEEEEECC-TTEEEEEEEES------CTTSCEEEEECCTTTCG-GGGTTTHHHHHHHSEEEEECCTTSSSSCEECSCCC
T ss_pred CcceEEEec-CCceEEEEeeC------CCCCCeEEEECCCCCCH-HHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCC
Confidence 356777887 55688988876 44678999999999998 889999999987899999999999 8887766678
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhh------hhhhh
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRAN------LERID 176 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~ 176 (273)
+.+++++++.++++.++.++++++|||+||.+|+.+|.++|++++++|++++................. ...+.
T Consensus 116 ~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (306)
T 2r11_A 116 TRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETFL 195 (306)
T ss_dssp CHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999987654332211111000 00000
Q ss_pred hccCC---CC-h-----HHHHHHhhhhhc-------cCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHH-HhcC
Q 024042 177 HLMLP---ES-A-----SQLRTLTGLAVS-------KNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKE-LLGK 239 (273)
Q Consensus 177 ~~~~~---~~-~-----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~-~~~~ 239 (273)
..... .. . ............ ..........+.++..|+|+++|++|.++|.+..+.+.+ .. +
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~ 274 (306)
T 2r11_A 196 NWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFV-P 274 (306)
T ss_dssp HHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHHHS-T
T ss_pred HHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHHHC-C
Confidence 00000 00 0 000000000000 000112344567778899999999999999988876555 45 8
Q ss_pred CcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 240 KARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 240 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
++++++++++||+.+.++|+++.+.|.+||++
T Consensus 275 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 275 DIEAEVIKNAGHVLSMEQPTYVNERVMRFFNA 306 (306)
T ss_dssp TCEEEEETTCCTTHHHHSHHHHHHHHHHHHC-
T ss_pred CCEEEEeCCCCCCCcccCHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999974
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=225.87 Aligned_cols=239 Identities=16% Similarity=0.282 Sum_probs=178.8
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHh-hcCCCeEEeecCCCCCCCCCCCcc
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQF-FAPHFNVYVPDLIFFGHSTTRSIQ 101 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~-l~~~~~v~~~d~~g~g~s~~~~~~ 101 (273)
..++.+++++ +|.+++|...+ ++|+|||+||++++. ..|..++.. +.++|+|+++|+||||.|..+...
T Consensus 7 ~~~~~~~~~~-~g~~l~~~~~g--------~~~~vv~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~~ 76 (309)
T 3u1t_A 7 FPFAKRTVEV-EGATIAYVDEG--------SGQPVLFLHGNPTSS-YLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIE 76 (309)
T ss_dssp CCCCCEEEEE-TTEEEEEEEEE--------CSSEEEEECCTTCCG-GGGTTTHHHHHHTTCEEEEECCTTSTTSCCCSSC
T ss_pred ccccceEEEE-CCeEEEEEEcC--------CCCEEEEECCCcchh-hhHHHHHHHHHhCCCEEEEEccCCCCCCCCCCcc
Confidence 4567788888 89999999986 367999999999998 899999988 666799999999999999988778
Q ss_pred ccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc---c---hHHH---hhhhhh
Q 024042 102 RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG---D---NEAL---VKRANL 172 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~---~---~~~~---~~~~~~ 172 (273)
++.++.++++.++++.++.++++++|||+||.+|+.+|.++|++++++|++++....... . .... ......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (309)
T 3u1t_A 77 YRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRT 156 (309)
T ss_dssp CCHHHHHHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTS
T ss_pred cCHHHHHHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhc
Confidence 899999999999999999999999999999999999999999999999999987654310 0 0000 000000
Q ss_pred h---------------hhh-h--ccCCCChHHHHHHhhhhhcc-------------CCCC----------ChhhHHhhhh
Q 024042 173 E---------------RID-H--LMLPESASQLRTLTGLAVSK-------------NLDI----------VPDFFFNDFV 211 (273)
Q Consensus 173 ~---------------~~~-~--~~~~~~~~~~~~~~~~~~~~-------------~~~~----------~~~~~~~~~~ 211 (273)
. .+. . .................... .... .....+.++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 236 (309)
T 3u1t_A 157 ADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASP 236 (309)
T ss_dssp TTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCC
T ss_pred cchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhcccCC
Confidence 0 000 0 00011111111111100000 0000 0112245566
Q ss_pred ccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 212 HDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 212 ~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.|+|+++|++|.++|.+..+.+.+.+ ++.+++.++++||+.+.++|+++.+.|.+||++.
T Consensus 237 ~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 296 (309)
T 3u1t_A 237 IPKLLFHAEPGALAPKPVVDYLSENV-PNLEVRFVGAGTHFLQEDHPHLIGQGIADWLRRN 296 (309)
T ss_dssp SCEEEEEEEECSSSCHHHHHHHHHHS-TTEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHH
T ss_pred CCEEEEecCCCCCCCHHHHHHHHhhC-CCCEEEEecCCcccchhhCHHHHHHHHHHHHHhc
Confidence 79999999999999999999999999 8889999999999999999999999999999864
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-35 Score=221.64 Aligned_cols=229 Identities=18% Similarity=0.192 Sum_probs=168.8
Q ss_pred CCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHH
Q 024042 33 DDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASL 111 (273)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 111 (273)
.+|.+++|...+ ++++|||+||++++. ..|..+++.|.+. |+|+++|+||||.|..+...++.+++++++
T Consensus 10 ~~g~~l~y~~~g--------~~~pvvllHG~~~~~-~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl 80 (279)
T 1hkh_A 10 STPIELYYEDQG--------SGQPVVLIHGYPLDG-HSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADL 80 (279)
T ss_dssp TEEEEEEEEEES--------SSEEEEEECCTTCCG-GGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred CCCeEEEEEecC--------CCCcEEEEcCCCchh-hHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 388899998875 345799999999998 8999999999876 999999999999999877778999999999
Q ss_pred HHHHHHhCCccEEEEEeccchHHHHHHHHhCCc-ccceEEEecCCCCCCCcc-------hHHHh----hhhh------hh
Q 024042 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE-RVEKVVIASSGVNMKRGD-------NEALV----KRAN------LE 173 (273)
Q Consensus 112 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~-~v~~~v~~~~~~~~~~~~-------~~~~~----~~~~------~~ 173 (273)
.+++++++.++++++||||||.+++.+|.++|+ +++++|++++........ ..... .... ..
T Consensus 81 ~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (279)
T 1hkh_A 81 HTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFT 160 (279)
T ss_dssp HHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHhcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHH
Confidence 999999999999999999999999999999998 999999999754321100 00000 0000 00
Q ss_pred hh-hhc-------cCCCChHHHHHHhhhhhccCC----------CCChhhHHhhh---hccEEEEecCCCCCCChHHH-H
Q 024042 174 RI-DHL-------MLPESASQLRTLTGLAVSKNL----------DIVPDFFFNDF---VHDVLIVWGDQDQIFPLKMA-T 231 (273)
Q Consensus 174 ~~-~~~-------~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~---~~p~l~i~g~~D~~~~~~~~-~ 231 (273)
.. ... ..................... .......+.++ ..|+|+++|++|.++|.+.. +
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~ 240 (279)
T 1hkh_A 161 DFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATAR 240 (279)
T ss_dssp HHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHH
T ss_pred HHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCChHHHHH
Confidence 00 000 000111111111111000000 01112245566 78999999999999998877 8
Q ss_pred HHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 232 ELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+.+.+ +++++++++++||+++.++|+++.+.|.+||++
T Consensus 241 ~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 241 RFHQAV-PEADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp HHHHHC-TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHHHhC-CCeeEEEeCCCCccchhcCHHHHHHHHHHHhhC
Confidence 888888 899999999999999999999999999999964
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=221.28 Aligned_cols=234 Identities=18% Similarity=0.179 Sum_probs=170.1
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQA 108 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~ 108 (273)
++++ +|.+++|...+ .+++|+|||+||++++. ..|..+++.|+++|+|+++|+||||.|..+...++.++.+
T Consensus 3 ~~~~-~g~~l~~~~~g------~~~~~~vv~lHG~~~~~-~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~ 74 (264)
T 3ibt_A 3 SLNV-NGTLMTYSESG------DPHAPTLFLLSGWCQDH-RLFKNLAPLLARDFHVICPDWRGHDAKQTDSGDFDSQTLA 74 (264)
T ss_dssp CCEE-TTEECCEEEES------CSSSCEEEEECCTTCCG-GGGTTHHHHHTTTSEEEEECCTTCSTTCCCCSCCCHHHHH
T ss_pred eEee-CCeEEEEEEeC------CCCCCeEEEEcCCCCcH-hHHHHHHHHHHhcCcEEEEccccCCCCCCCccccCHHHHH
Confidence 3455 88999999987 44678999999999999 8999999999888999999999999999887778999999
Q ss_pred HHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC-CcccceEEEecCCCCCCCcchHHHhhhhh--------hhhhhhcc
Q 024042 109 ASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKRGDNEALVKRAN--------LERIDHLM 179 (273)
Q Consensus 109 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~~~v~~~v~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 179 (273)
+++.+++++++.++++++|||+||.+|+.+|.++ |++++++|++++...........+..... .......+
T Consensus 75 ~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (264)
T 3ibt_A 75 QDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQSFFDEWA 154 (264)
T ss_dssp HHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHHHHHTTCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcchhhcccChhhHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999 99999999999877111110000000000 00001111
Q ss_pred CC-CChHHHHHHhhhhhccCC----------------CCChhhHHhhhhccEEEEec--CCCCCCChHHHHHHHHHhcCC
Q 024042 180 LP-ESASQLRTLTGLAVSKNL----------------DIVPDFFFNDFVHDVLIVWG--DQDQIFPLKMATELKELLGKK 240 (273)
Q Consensus 180 ~~-~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~p~l~i~g--~~D~~~~~~~~~~~~~~~~~~ 240 (273)
.. .................. .......+.++..|+++++| +.|...+.+..+.+.+.+ ++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~~~~~~~~-~~ 233 (264)
T 3ibt_A 155 ETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGH-SW 233 (264)
T ss_dssp TTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHHHHHHHHHC-TT
T ss_pred ccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHHHHHHHHhC-CC
Confidence 11 111111111111100000 00111345566779999976 444444567778888888 89
Q ss_pred cEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 241 ARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 241 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.++++++++||+.+.++|+++.+.|.+||++
T Consensus 234 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 264 (264)
T 3ibt_A 234 FHPRHIPGRTHFPSLENPVAVAQAIREFLQA 264 (264)
T ss_dssp EEEEECCCSSSCHHHHCHHHHHHHHHHHTC-
T ss_pred ceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999974
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-35 Score=217.84 Aligned_cols=230 Identities=20% Similarity=0.241 Sum_probs=168.8
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCc--hhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPE--AIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTEL 105 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~--~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~ 105 (273)
++.. +|.+++++.+.++. ..++.|+||++||++++ . ..|..+++.|.+. |+|+++|+||||.|......++..
T Consensus 5 ~~~~-~g~~l~~~~~~p~~--~~~~~p~vvl~HG~~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 80 (251)
T 2wtm_A 5 YIDC-DGIKLNAYLDMPKN--NPEKCPLCIIIHGFTGHSEE-RHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLF 80 (251)
T ss_dssp EEEE-TTEEEEEEEECCTT--CCSSEEEEEEECCTTCCTTS-HHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHH
T ss_pred EEec-CCcEEEEEEEccCC--CCCCCCEEEEEcCCCccccc-ccHHHHHHHHHHCCCEEEEecCCCCCCCCCccccCCHH
Confidence 4555 88999988775321 12356899999999998 7 8899999999775 999999999999998765566888
Q ss_pred HHHHHHHHHHHHhC----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhh-hhhhccC
Q 024042 106 FQAASLGKLLEKIG----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE-RIDHLML 180 (273)
Q Consensus 106 ~~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 180 (273)
..++|+.++++.+. .++++++||||||.+|+.+|.++|++++++|+++|..... .......... .......
T Consensus 81 ~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~----~~~~~~~~~~~~~~~~~~ 156 (251)
T 2wtm_A 81 KWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIP----EIARTGELLGLKFDPENI 156 (251)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHH----HHHHHTEETTEECBTTBC
T ss_pred HHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhH----HHHhhhhhccccCCchhc
Confidence 88999999998884 4689999999999999999999999999999998864321 1111000000 0000000
Q ss_pred CCCh-H-----HHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcC
Q 024042 181 PESA-S-----QLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQ 254 (273)
Q Consensus 181 ~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 254 (273)
+... . ......... ..........++..|+|+++|++|.++|.+.++.+.+.+ +++++++++++||+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~~~gH~~- 230 (251)
T 2wtm_A 157 PDELDAWDGRKLKGNYVRVA----QTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQY-KNCKLVTIPGDTHCY- 230 (251)
T ss_dssp CSEEEETTTEEEETHHHHHH----TTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHS-SSEEEEEETTCCTTC-
T ss_pred chHHhhhhccccchHHHHHH----HccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhC-CCcEEEEECCCCccc-
Confidence 0000 0 000000000 011223445667789999999999999999999999998 899999999999999
Q ss_pred cCChhhHHHHHHHHhccc
Q 024042 255 IENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 255 ~~~~~~~~~~i~~fl~~~ 272 (273)
.++|+++.+.|.+||+++
T Consensus 231 ~~~~~~~~~~i~~fl~~~ 248 (251)
T 2wtm_A 231 DHHLELVTEAVKEFMLEQ 248 (251)
T ss_dssp TTTHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHh
Confidence 999999999999999864
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=224.19 Aligned_cols=241 Identities=15% Similarity=0.141 Sum_probs=167.7
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC-cccc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS-IQRT 103 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~-~~~~ 103 (273)
++...+++ +|.+++|...+ + +.++++|||+||++++....|..+...+..+|+|+++|+||||.|..+. ..++
T Consensus 5 ~~~~~~~~-~g~~l~~~~~g----~-~~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~ 78 (293)
T 1mtz_A 5 CIENYAKV-NGIYIYYKLCK----A-PEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFT 78 (293)
T ss_dssp CEEEEEEE-TTEEEEEEEEC----C-SSCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCS
T ss_pred hcceEEEE-CCEEEEEEEEC----C-CCCCCeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCCCCCccc
Confidence 45567777 89999999886 1 1223789999997655524444444444344999999999999998765 2378
Q ss_pred HHHHHHHHHHHHHHh-CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch--HHHhhhhh------h--
Q 024042 104 ELFQAASLGKLLEKI-GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN--EALVKRAN------L-- 172 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~--~~~~~~~~------~-- 172 (273)
.+++++++.++++++ +.++++|+||||||.+|+.+|.++|++++++|++++......... ........ .
T Consensus 79 ~~~~~~dl~~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (293)
T 1mtz_A 79 IDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKK 158 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 899999999999999 999999999999999999999999999999999998764211000 00000000 0
Q ss_pred ---------h--------hhhhcc--CCCChHHHHHHhh-----hhh---cc---------CCCCChhhHHhhhhccEEE
Q 024042 173 ---------E--------RIDHLM--LPESASQLRTLTG-----LAV---SK---------NLDIVPDFFFNDFVHDVLI 216 (273)
Q Consensus 173 ---------~--------~~~~~~--~~~~~~~~~~~~~-----~~~---~~---------~~~~~~~~~~~~~~~p~l~ 216 (273)
. ...... ....+........ ..+ .. ...+.....+.++..|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 238 (293)
T 1mtz_A 159 YGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLI 238 (293)
T ss_dssp HHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEE
T ss_pred hhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccCCCCEEE
Confidence 0 000000 0111111111110 000 00 0011122345667789999
Q ss_pred EecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcccC
Q 024042 217 VWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 217 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 273 (273)
++|++| .++++..+.+.+.+ +++++++++++||+++.++|+++.+.|.+||++++
T Consensus 239 i~G~~D-~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~l 293 (293)
T 1mtz_A 239 TVGEYD-EVTPNVARVIHEKI-AGSELHVFRDCSHLTMWEDREGYNKLLSDFILKHL 293 (293)
T ss_dssp EEETTC-SSCHHHHHHHHHHS-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTCC
T ss_pred EeeCCC-CCCHHHHHHHHHhC-CCceEEEeCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 999999 67888889999988 89999999999999999999999999999998764
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-35 Score=220.98 Aligned_cols=235 Identities=14% Similarity=0.243 Sum_probs=176.5
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCC--
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRS-- 99 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~-- 99 (273)
.+++.+.+++ +|.+++|...+ ++++|+||++||++++. ..|..+++.|.+. |+|+++|+||+|.|....
T Consensus 2 ~~~~~~~~~~-~g~~l~~~~~g------~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~ 73 (286)
T 3qit_A 2 NAMEEKFLEF-GGNQICLCSWG------SPEHPVVLCIHGILEQG-LAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMV 73 (286)
T ss_dssp CCCEEEEEEE-TTEEEEEEEES------CTTSCEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSG
T ss_pred chhhhheeec-CCceEEEeecC------CCCCCEEEEECCCCccc-chHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCC
Confidence 3577888888 89999999987 45678999999999999 8999999999888 999999999999998776
Q ss_pred ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc----hHHHhhhhhh---
Q 024042 100 IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD----NEALVKRANL--- 172 (273)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~----~~~~~~~~~~--- 172 (273)
..++.++.++++.+++++++.++++++|||+||.+|+.++.++|++++++|++++........ ...+......
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (286)
T 3qit_A 74 TSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSS 153 (286)
T ss_dssp GGCSHHHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTC
T ss_pred CCcCHHHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhc
Confidence 567899999999999999999999999999999999999999999999999999877654332 0111100000
Q ss_pred --------------hhhhhccCCCChHHHHHHhhhhhccC-------------------------CCCChhhHHhhhhcc
Q 024042 173 --------------ERIDHLMLPESASQLRTLTGLAVSKN-------------------------LDIVPDFFFNDFVHD 213 (273)
Q Consensus 173 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~p 213 (273)
.......................... ..........++..|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 233 (286)
T 3qit_A 154 TPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVP 233 (286)
T ss_dssp CCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHHHCCSC
T ss_pred cccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHHhccCCC
Confidence 00000011111111111111110000 000111233566779
Q ss_pred EEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHH
Q 024042 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKN 267 (273)
Q Consensus 214 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 267 (273)
+++++|++|.++|.+..+.+.+.+ ++.+++++++ ||+.+.++|+++.+.|.+
T Consensus 234 ~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 234 TTLVYGDSSKLNRPEDLQQQKMTM-TQAKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp EEEEEETTCCSSCHHHHHHHHHHS-TTSEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred eEEEEeCCCcccCHHHHHHHHHHC-CCCeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 999999999999999999999999 8999999998 999999999999888753
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-36 Score=225.30 Aligned_cols=231 Identities=15% Similarity=0.200 Sum_probs=171.4
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCccccHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQRTELF 106 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~~~~ 106 (273)
++++ +|.+++|...+ ++|+||++||++++. ..|..++..|.+ +|+|+++|+||||.|..... .+.++
T Consensus 5 ~~~~-~g~~l~y~~~g--------~~~~vv~lhG~~~~~-~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~-~~~~~ 73 (272)
T 3fsg_A 5 KEYL-TRSNISYFSIG--------SGTPIIFLHGLSLDK-QSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP-STSDN 73 (272)
T ss_dssp CCEE-CTTCCEEEEEC--------CSSEEEEECCTTCCH-HHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS-CSHHH
T ss_pred EEEe-cCCeEEEEEcC--------CCCeEEEEeCCCCcH-HHHHHHHHHHhccCceEEEEecCCCCCCCCCCCC-CCHHH
Confidence 3556 88999999875 567999999999999 899999999987 59999999999999998777 89999
Q ss_pred HHHHHHHHHHH-hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch----------HHHhh---hhhh
Q 024042 107 QAASLGKLLEK-IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN----------EALVK---RANL 172 (273)
Q Consensus 107 ~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~----------~~~~~---~~~~ 172 (273)
.++++.+++++ ++.++++++|||+||.+|+.++.++|++++++|+++|......... ..+.. ....
T Consensus 74 ~~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (272)
T 3fsg_A 74 VLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYF 153 (272)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGH
T ss_pred HHHHHHHHHHHHhCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHH
Confidence 99999999999 7889999999999999999999999999999999998753321100 00000 0000
Q ss_pred hhhhhccCCCChHHHHHHhh--------------hhhccC--CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHH
Q 024042 173 ERIDHLMLPESASQLRTLTG--------------LAVSKN--LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKEL 236 (273)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~--~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~ 236 (273)
..+................. ...... ....+.....++..|+++++|++|.++|.+..+.+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 233 (272)
T 3fsg_A 154 ADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINH 233 (272)
T ss_dssp HHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTT
T ss_pred HHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHh
Confidence 00000000001111100000 000000 01111122356677999999999999999999999988
Q ss_pred hcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 237 LGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 237 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+ +++++++++++||+.+.++|+++.+.|.+||++
T Consensus 234 ~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 267 (272)
T 3fsg_A 234 N-ENGEIVLLNRTGHNLMIDQREAVGFHFDLFLDE 267 (272)
T ss_dssp C-TTEEEEEESSCCSSHHHHTHHHHHHHHHHHHHH
T ss_pred c-CCCeEEEecCCCCCchhcCHHHHHHHHHHHHHH
Confidence 8 899999999999999999999999999999975
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=223.07 Aligned_cols=219 Identities=18% Similarity=0.241 Sum_probs=160.3
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC----ccccHHHHHHHHHHHHHHhCCccEEEEEe
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS----IQRTELFQAASLGKLLEKIGVERFSVVGT 128 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~l~G~ 128 (273)
++|+|||+||++++. ..|..+++.|+++|+|+++|+||||.|+.+. ..++.+++++++.+++++++.++++++||
T Consensus 19 g~~~vvllHG~~~~~-~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGh 97 (271)
T 1wom_A 19 GKASIMFAPGFGCDQ-SVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGH 97 (271)
T ss_dssp CSSEEEEECCTTCCG-GGGTTTGGGGTTTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred CCCcEEEEcCCCCch-hhHHHHHHHHHhcCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHcCCCCeEEEEe
Confidence 347999999999998 8999999999888999999999999998653 23588999999999999999999999999
Q ss_pred ccchHHHHHHHHhCCcccceEEEecCCCCCCCc--------chH---HHhhhhh--hhh----hhh-ccC-CCChHHHHH
Q 024042 129 SYGGFVAYHMARMWPERVEKVVIASSGVNMKRG--------DNE---ALVKRAN--LER----IDH-LML-PESASQLRT 189 (273)
Q Consensus 129 S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~--------~~~---~~~~~~~--~~~----~~~-~~~-~~~~~~~~~ 189 (273)
||||.+|+.+|.++|++++++|++++....... ... ....... ... ... ... .........
T Consensus 98 S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (271)
T 1wom_A 98 SVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEE 177 (271)
T ss_dssp THHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCTTCHHHHHH
T ss_pred CHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCchHHHHH
Confidence 999999999999999999999999875322110 000 0000000 000 000 000 011111111
Q ss_pred Hhhhhhcc-----------CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCCh
Q 024042 190 LTGLAVSK-----------NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP 258 (273)
Q Consensus 190 ~~~~~~~~-----------~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 258 (273)
........ .........+.++..|+|+++|++|.++|.+..+.+.+.+ ++.++++++++||+++.++|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p 256 (271)
T 1wom_A 178 LESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHL-PYSSLKQMEARGHCPHMSHP 256 (271)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHS-SSEEEEEEEEESSCHHHHCH
T ss_pred HHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHC-CCCEEEEeCCCCcCccccCH
Confidence 11000000 0001122345667789999999999999999999999998 89999999999999999999
Q ss_pred hhHHHHHHHHhcccC
Q 024042 259 GLFNSIVKNFLRGSL 273 (273)
Q Consensus 259 ~~~~~~i~~fl~~~l 273 (273)
+++.+.|.+||++++
T Consensus 257 ~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 257 DETIQLIGDYLKAHV 271 (271)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998753
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-34 Score=213.44 Aligned_cols=228 Identities=17% Similarity=0.170 Sum_probs=171.1
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHH
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
.++...+|.+++|...+ ++|+||++||++++. ..|..+++.|+++|+|+++|+||||.|.... .++.+++
T Consensus 5 ~~~~~~~g~~l~~~~~g--------~~~~vv~lHG~~~~~-~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~-~~~~~~~ 74 (262)
T 3r0v_A 5 QTVPSSDGTPIAFERSG--------SGPPVVLVGGALSTR-AGGAPLAERLAPHFTVICYDRRGRGDSGDTP-PYAVERE 74 (262)
T ss_dssp CEEECTTSCEEEEEEEE--------CSSEEEEECCTTCCG-GGGHHHHHHHTTTSEEEEECCTTSTTCCCCS-SCCHHHH
T ss_pred heEEcCCCcEEEEEEcC--------CCCcEEEECCCCcCh-HHHHHHHHHHhcCcEEEEEecCCCcCCCCCC-CCCHHHH
Confidence 34566699999999886 367999999999999 8999999999977999999999999998765 6899999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc-------hHHHhhhhh-------hh
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD-------NEALVKRAN-------LE 173 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-------~~~~~~~~~-------~~ 173 (273)
++++.++++.++ ++++++|||+||.+|+.++.++| +++++|++++........ ...+..... ..
T Consensus 75 ~~~~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (262)
T 3r0v_A 75 IEDLAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAVT 152 (262)
T ss_dssp HHHHHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccchhhHHH
Confidence 999999999999 99999999999999999999999 999999999876654221 011111000 00
Q ss_pred hhhhccCCCChHHHHHHhhhh------------h----ccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh
Q 024042 174 RIDHLMLPESASQLRTLTGLA------------V----SKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL 237 (273)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~------------~----~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~ 237 (273)
.+................... . ...........+.++..|+++++|++|.++|.+..+.+.+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~ 232 (262)
T 3r0v_A 153 YFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHTAQELADTI 232 (262)
T ss_dssp HHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHHHHHHHHHHHHHS
T ss_pred HHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCCCHHHHHHHHHhC
Confidence 011111111111111111100 0 000011223455667779999999999999999999999999
Q ss_pred cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 238 GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 238 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
++.++++++++|| +++|+++.+.|.+||++
T Consensus 233 -~~~~~~~~~~~gH---~~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 233 -PNARYVTLENQTH---TVAPDAIAPVLVEFFTR 262 (262)
T ss_dssp -TTEEEEECCCSSS---SCCHHHHHHHHHHHHC-
T ss_pred -CCCeEEEecCCCc---ccCHHHHHHHHHHHHhC
Confidence 8999999999999 36899999999999974
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=217.96 Aligned_cols=217 Identities=16% Similarity=0.213 Sum_probs=153.8
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcC-CCeEEeecCCCCCCCCCCCc-cccHHHHHHHHHHHHHHhC-CccEEEEEe
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHSTTRSI-QRTELFQAASLGKLLEKIG-VERFSVVGT 128 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~-~~~i~l~G~ 128 (273)
+++++|||+||++.+. ..|..+++.|++ +|+|+++|+||||.|..... .++.+++++++.+++++++ .++++|+||
T Consensus 8 ~~g~~vvllHG~~~~~-~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGh 86 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGA-WIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGH 86 (264)
T ss_dssp -CCCEEEEECCTTCCG-GGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHSCTTCCEEEEEE
T ss_pred CCCCeEEEECCCcccc-chHHHHHHHHHhCCCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 5778999999999888 899999999965 59999999999999976433 4689999999999999996 589999999
Q ss_pred ccchHHHHHHHHhCCcccceEEEecCCCCCCCcch-H---HHhhhhhhhhh-hh---cc---------CCCChHHHH---
Q 024042 129 SYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN-E---ALVKRANLERI-DH---LM---------LPESASQLR--- 188 (273)
Q Consensus 129 S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~-~---~~~~~~~~~~~-~~---~~---------~~~~~~~~~--- 188 (273)
||||.+++.++.++|++|+++|++++......... . ........... .. .. .........
T Consensus 87 SmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 2wfl_A 87 SFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKM 166 (264)
T ss_dssp TTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEECCHHHHHHHT
T ss_pred ChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhhhHHHHHHHH
Confidence 99999999999999999999999987532211111 1 11110000000 00 00 000001000
Q ss_pred ---------HHhhhhhccCCCCCh-------hhH-HhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCC
Q 024042 189 ---------TLTGLAVSKNLDIVP-------DFF-FNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSH 251 (273)
Q Consensus 189 ---------~~~~~~~~~~~~~~~-------~~~-~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 251 (273)
..... ......... ... ......|+|+|+|++|.++|.+..+.+.+.+ ++.++++++++||
T Consensus 167 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH 244 (264)
T 2wfl_A 167 FQNCSVEDLELAKM-LTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESV-GADKVKEIKEADH 244 (264)
T ss_dssp STTSCHHHHHHHHH-HCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHH-CCSEEEEETTCCS
T ss_pred hcCCCHHHHHHHHh-ccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhC-CCceEEEeCCCCC
Confidence 00000 000000000 000 0012459999999999999999999999999 8999999999999
Q ss_pred CcCcCChhhHHHHHHHHhcc
Q 024042 252 VPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 252 ~~~~~~~~~~~~~i~~fl~~ 271 (273)
+++.|+|+++.+.|.+|+++
T Consensus 245 ~~~~e~P~~~~~~l~~f~~~ 264 (264)
T 2wfl_A 245 MGMLSQPREVCKCLLDISDS 264 (264)
T ss_dssp CHHHHSHHHHHHHHHHHHC-
T ss_pred chhhcCHHHHHHHHHHHhhC
Confidence 99999999999999999864
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-34 Score=219.38 Aligned_cols=239 Identities=19% Similarity=0.266 Sum_probs=170.9
Q ss_pred eeEEecCCc--ceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-cc
Q 024042 27 SQTIDIDDE--TTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QR 102 (273)
Q Consensus 27 ~~~~~~~~g--~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~ 102 (273)
..+++. +| .+++|+..+ +..+++|+|||+||++++. ..|..+++.|.+. |+|+++|+||+|.|..... .+
T Consensus 22 ~~~~~~-~~~~~~~~~~~~~----~~~~~~p~vv~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 95 (315)
T 4f0j_A 22 YLDFTS-QGQPLSMAYLDVA----PKKANGRTILLMHGKNFCA-GTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQY 95 (315)
T ss_dssp EEEEEE-TTEEEEEEEEEEC----CSSCCSCEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCC
T ss_pred eEEEec-CCCCeeEEEeecC----CCCCCCCeEEEEcCCCCcc-hHHHHHHHHHHHCCCeEEEeecCCCCCCCCCCcccc
Confidence 344444 44 456666665 3356789999999999999 8999999999886 9999999999999987765 67
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc-------chHHHhhhhh----
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG-------DNEALVKRAN---- 171 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~-------~~~~~~~~~~---- 171 (273)
+.++.++++.++++.++.++++++|||+||.+|+.++.++|++++++|++++....... ..........
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (315)
T 4f0j_A 96 SFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSA 175 (315)
T ss_dssp CHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHHTTCCH
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhhcccCCh
Confidence 99999999999999999999999999999999999999999999999999986432110 0000000000
Q ss_pred --hhh-hh-hccC---CCChHHHHHHhhhhhccC----------------CCCChhhHHhhhhccEEEEecCCCCCCC--
Q 024042 172 --LER-ID-HLML---PESASQLRTLTGLAVSKN----------------LDIVPDFFFNDFVHDVLIVWGDQDQIFP-- 226 (273)
Q Consensus 172 --~~~-~~-~~~~---~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~p~l~i~g~~D~~~~-- 226 (273)
... .. .... .................. ..........++..|+|+++|++|.++|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~~ 255 (315)
T 4f0j_A 176 EGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGK 255 (315)
T ss_dssp HHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTTG
T ss_pred HHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCcCccc
Confidence 000 00 0000 000001100000000000 0001112345666799999999999999
Q ss_pred --------------hHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 227 --------------LKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 227 --------------~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.+..+.+.+.+ +++++++++++||+.+.++|+++.+.|.+||+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 256 DAAPAELKARLGNYAQLGKDAARRI-PQATLVEFPDLGHTPQIQAPERFHQALLEGLQTQ 314 (315)
T ss_dssp GGSCHHHHTTSCCHHHHHHHHHHHS-TTEEEEEETTCCSCHHHHSHHHHHHHHHHHHCC-
T ss_pred cccccccccccccchhhhhHHHhhc-CCceEEEeCCCCcchhhhCHHHHHHHHHHHhccC
Confidence 77888888888 8999999999999999999999999999999864
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=224.20 Aligned_cols=214 Identities=19% Similarity=0.278 Sum_probs=157.4
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh--CCccEEEEEe
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI--GVERFSVVGT 128 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~ 128 (273)
++++.||++||++++. ..|+.+++.|++. |+|+++|+||||.|.......+..++++++.++++.+ +.++++|+||
T Consensus 49 G~~~~VlllHG~~~s~-~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~v~lvG~ 127 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGSP-QSMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWLEERCDVLFMTGL 127 (281)
T ss_dssp CSSEEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHHHHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred CCCceEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEEEEEE
Confidence 3456799999999998 8999999999887 9999999999999975555668888889999988877 4689999999
Q ss_pred ccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhh-hhhhc------------cCCCC-hHHHHHHhhhh
Q 024042 129 SYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE-RIDHL------------MLPES-ASQLRTLTGLA 194 (273)
Q Consensus 129 S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------~~~~~-~~~~~~~~~~~ 194 (273)
||||.+|+.++.++|++++++|++++................... ..... ..... ...........
T Consensus 128 S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (281)
T 4fbl_A 128 SMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPVPAIKHLITIG 207 (281)
T ss_dssp THHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEEGGGHHHHHHHH
T ss_pred CcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCchHHHHHHHHhh
Confidence 999999999999999999999999987665432111111000000 00000 00000 00011110000
Q ss_pred hccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCCCCCCcCcC-ChhhHHHHHHHHhccc
Q 024042 195 VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTSHVPQIE-NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~ 272 (273)
......+.++..|+|+++|++|.++|++.++.+++.++ +++++++++++||..+.+ +++++.+.|.+||+++
T Consensus 208 ------~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 208 ------AVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELILERSLAFIRKH 281 (281)
T ss_dssp ------HHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHTC
T ss_pred ------hhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 01122345667799999999999999999999999983 467899999999998876 5899999999999986
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=222.66 Aligned_cols=237 Identities=18% Similarity=0.334 Sum_probs=166.2
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCC--C-
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTR--S- 99 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~--~- 99 (273)
..+...+++ +|.+++|...| ++|+|||+||++++. ..|..+++.|.+. |+|+++|+||||.|+.+ .
T Consensus 10 ~~~~~~~~~-~g~~l~y~~~G--------~g~~vvllHG~~~~~-~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~ 79 (328)
T 2cjp_A 10 KIEHKMVAV-NGLNMHLAELG--------EGPTILFIHGFPELW-YSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLND 79 (328)
T ss_dssp CCEEEEEEE-TTEEEEEEEEC--------SSSEEEEECCTTCCG-GGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTC
T ss_pred hhheeEecC-CCcEEEEEEcC--------CCCEEEEECCCCCch-HHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCC
Confidence 345566666 89999999875 357999999999998 8999999999765 99999999999999865 2
Q ss_pred -ccccHHHHHHHHHHHHHHhC--CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc--chH-HHhhhhh--
Q 024042 100 -IQRTELFQAASLGKLLEKIG--VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG--DNE-ALVKRAN-- 171 (273)
Q Consensus 100 -~~~~~~~~~~~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~--~~~-~~~~~~~-- 171 (273)
..++.+++++++.+++++++ .++++|+||||||.+|+.+|.++|++|+++|+++++...... ... .......
T Consensus 80 ~~~~~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T 2cjp_A 80 PSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGED 159 (328)
T ss_dssp GGGGSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHHHHHCTT
T ss_pred cccccHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCChHHHHHhhcccc
Confidence 35789999999999999999 899999999999999999999999999999999865432110 011 0000000
Q ss_pred --------------------hhh-hhhccC---------CC------------------ChHHHHHHhhhhhc-------
Q 024042 172 --------------------LER-IDHLML---------PE------------------SASQLRTLTGLAVS------- 196 (273)
Q Consensus 172 --------------------~~~-~~~~~~---------~~------------------~~~~~~~~~~~~~~------- 196 (273)
... ....+. +. ..............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T 2cjp_A 160 HYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAV 239 (328)
T ss_dssp BHHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCSHHHH
T ss_pred hHHHhhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhcccCCcchH
Confidence 000 000000 00 00000000000000
Q ss_pred ---cCCC--C--ChhhHHhhhhccEEEEecCCCCCCChHH------HHHHHHHhcCCc-EEEEeCCCCCCcCcCChhhHH
Q 024042 197 ---KNLD--I--VPDFFFNDFVHDVLIVWGDQDQIFPLKM------ATELKELLGKKA-RLEIIENTSHVPQIENPGLFN 262 (273)
Q Consensus 197 ---~~~~--~--~~~~~~~~~~~p~l~i~g~~D~~~~~~~------~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~ 262 (273)
.... + .......++..|+++|+|++|.++|.+. .+.+.+.+ ++. ++++++++||+++.|+|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~i~~~gH~~~~e~p~~~~ 318 (328)
T 2cjp_A 240 NYYRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDV-PLLEEVVVLEGAAHFVSQERPHEIS 318 (328)
T ss_dssp HHHHTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHS-TTBCCCEEETTCCSCHHHHSHHHHH
T ss_pred HHHHhcccchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHh-cCCeeEEEcCCCCCCcchhCHHHHH
Confidence 0000 0 0000123456799999999999998642 25666777 888 899999999999999999999
Q ss_pred HHHHHHhcc
Q 024042 263 SIVKNFLRG 271 (273)
Q Consensus 263 ~~i~~fl~~ 271 (273)
+.|.+||++
T Consensus 319 ~~i~~fl~~ 327 (328)
T 2cjp_A 319 KHIYDFIQK 327 (328)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999999975
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-35 Score=222.47 Aligned_cols=238 Identities=18% Similarity=0.208 Sum_probs=167.9
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc--
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI-- 100 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~-- 100 (273)
.+++.+++++ +|.+++|...+ ++|+|||+||++++. ..|..+++.|.++|+|+++|+||||.|..+..
T Consensus 11 ~~~~~~~~~~-~g~~l~~~~~g--------~~~~vv~lHG~~~~~-~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~ 80 (306)
T 3r40_A 11 PGFGSEWINT-SSGRIFARVGG--------DGPPLLLLHGFPQTH-VMWHRVAPKLAERFKVIVADLPGYGWSDMPESDE 80 (306)
T ss_dssp TTCEEEEECC-TTCCEEEEEEE--------CSSEEEEECCTTCCG-GGGGGTHHHHHTTSEEEEECCTTSTTSCCCCCCT
T ss_pred cCCceEEEEe-CCEEEEEEEcC--------CCCeEEEECCCCCCH-HHHHHHHHHhccCCeEEEeCCCCCCCCCCCCCCc
Confidence 4567788888 89999999875 567999999999999 89999999999899999999999999998776
Q ss_pred ---cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc--hHHH---------
Q 024042 101 ---QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD--NEAL--------- 166 (273)
Q Consensus 101 ---~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~--~~~~--------- 166 (273)
.++.+++++++.+++++++.++++++|||+||.+|+.+|.++|++++++|++++........ ....
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (306)
T 3r40_A 81 QHTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSF 160 (306)
T ss_dssp TCGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHH
Confidence 57899999999999999999999999999999999999999999999999999754321000 0000
Q ss_pred -----------hhhhh---hhhh-hhc-----cCCCChHHHHHHhhhhhc------------cCCCCChh------hHHh
Q 024042 167 -----------VKRAN---LERI-DHL-----MLPESASQLRTLTGLAVS------------KNLDIVPD------FFFN 208 (273)
Q Consensus 167 -----------~~~~~---~~~~-~~~-----~~~~~~~~~~~~~~~~~~------------~~~~~~~~------~~~~ 208 (273)
..... .... ... .................. ........ ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (306)
T 3r40_A 161 LAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGN 240 (306)
T ss_dssp HTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTC
T ss_pred hhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhhhhhhhcc
Confidence 00000 0000 000 011111111111110000 00000000 0225
Q ss_pred hhhccEEEEecCCCCCCC-hHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 209 DFVHDVLIVWGDQDQIFP-LKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 209 ~~~~p~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
++..|+++++|++|.+++ ....+.+.+.. ++.+++++ ++||+.+.++|+++.+.|.+||++.
T Consensus 241 ~i~~P~lii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 241 KIPVPMLALWGASGIAQSAATPLDVWRKWA-SDVQGAPI-ESGHFLPEEAPDQTAEALVRFFSAA 303 (306)
T ss_dssp CBCSCEEEEEETTCC------CHHHHHHHB-SSEEEEEE-SSCSCHHHHSHHHHHHHHHHHHHC-
T ss_pred CCCcceEEEEecCCcccCchhHHHHHHhhc-CCCeEEEe-cCCcCchhhChHHHHHHHHHHHHhc
Confidence 566799999999999998 45556666666 89999999 6899999999999999999999864
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=216.23 Aligned_cols=220 Identities=16% Similarity=0.159 Sum_probs=162.1
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc-ccHHHHHHHHHHHHHHh-CCccEEEEE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ-RTELFQAASLGKLLEKI-GVERFSVVG 127 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~l~G 127 (273)
..++|+|||+||++++. ..|..+++.|.+. |+|+++|+||||.|..+... ++.+++++++.++++.+ +.++++++|
T Consensus 9 ~~~~~~vvllHG~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG 87 (267)
T 3sty_A 9 PFVKKHFVLVHAAFHGA-WCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLPANEKIILVG 87 (267)
T ss_dssp -CCCCEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTSCTTSCEEEEE
T ss_pred CCCCCeEEEECCCCCCc-chHHHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 45689999999999998 9999999999886 99999999999999977554 79999999999999999 479999999
Q ss_pred eccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhh--hhhh-------------------------hhhccC
Q 024042 128 TSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA--NLER-------------------------IDHLML 180 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~--~~~~-------------------------~~~~~~ 180 (273)
||+||.+|+.++.++|++++++|++++................ .... ....+.
T Consensus 88 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (267)
T 3sty_A 88 HALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVY 167 (267)
T ss_dssp ETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCHHHHHHHTS
T ss_pred EcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhHHHHHHhhc
Confidence 9999999999999999999999999987655443322222111 0000 000001
Q ss_pred CCChHHHHHHhhhhhccCCCCC--------hhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCC
Q 024042 181 PESASQLRTLTGLAVSKNLDIV--------PDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHV 252 (273)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 252 (273)
...................... ..........|+++++|++|.+++.+..+.+.+.+ +++++++++++||+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~ 246 (267)
T 3sty_A 168 HLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKN-PPDEVKEIEGSDHV 246 (267)
T ss_dssp TTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHS-CCSEEEECTTCCSC
T ss_pred ccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhC-CCceEEEeCCCCcc
Confidence 1111111111111100000000 00000111459999999999999999999999999 88999999999999
Q ss_pred cCcCChhhHHHHHHHHhccc
Q 024042 253 PQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 253 ~~~~~~~~~~~~i~~fl~~~ 272 (273)
++.++|+++.+.|.+|+++.
T Consensus 247 ~~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 247 TMMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp HHHHSHHHHHHHHHHHHHHC
T ss_pred ccccChHHHHHHHHHHHHhc
Confidence 99999999999999999864
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=221.21 Aligned_cols=234 Identities=15% Similarity=0.255 Sum_probs=167.3
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-cccH
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI-QRTE 104 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~-~~~~ 104 (273)
+.+.+++ +|.+++|...| .+++|+|||+||++++. ..|..+++.|++.|+|+++|+||||.|+.+.. .++.
T Consensus 22 ~~~~~~~-~g~~l~y~~~G------~g~~~~vvllHG~~~~~-~~w~~~~~~L~~~~~via~Dl~GhG~S~~~~~~~~~~ 93 (318)
T 2psd_A 22 RCKQMNV-LDSFINYYDSE------KHAENAVIFLHGNATSS-YLWRHVVPHIEPVARCIIPDLIGMGKSGKSGNGSYRL 93 (318)
T ss_dssp HCEEEEE-TTEEEEEEECC------SCTTSEEEEECCTTCCG-GGGTTTGGGTTTTSEEEEECCTTSTTCCCCTTSCCSH
T ss_pred cceEEee-CCeEEEEEEcC------CCCCCeEEEECCCCCcH-HHHHHHHHHhhhcCeEEEEeCCCCCCCCCCCCCccCH
Confidence 3456777 89999999886 34457999999999998 89999999998889999999999999987643 4789
Q ss_pred HHHHHHHHHHHHHhCC-ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC----Ccc-hHHHhhhhhh------
Q 024042 105 LFQAASLGKLLEKIGV-ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK----RGD-NEALVKRANL------ 172 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~----~~~-~~~~~~~~~~------ 172 (273)
+++++++.++++.++. ++++|+||||||.+|+.+|.++|++|+++|++++..... ... ..........
T Consensus 94 ~~~a~dl~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (318)
T 2psd_A 94 LDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEKM 173 (318)
T ss_dssp HHHHHHHHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccchhh
Confidence 9999999999999998 899999999999999999999999999999987542211 000 0011000000
Q ss_pred --------hh-hhhcc-CCCChHHHHHHhhhh------------hccCCCC---C----------hhhHHhhh-hccEEE
Q 024042 173 --------ER-IDHLM-LPESASQLRTLTGLA------------VSKNLDI---V----------PDFFFNDF-VHDVLI 216 (273)
Q Consensus 173 --------~~-~~~~~-~~~~~~~~~~~~~~~------------~~~~~~~---~----------~~~~~~~~-~~p~l~ 216 (273)
.. ..... ............... +...... . ....+.++ ..|+|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lv 253 (318)
T 2psd_A 174 VLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLF 253 (318)
T ss_dssp HTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEEE
T ss_pred hhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhccccCCCeEE
Confidence 00 00000 001111111111100 0000000 0 01123455 789999
Q ss_pred EecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 217 VWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 217 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
|+|++| +++. ..+.+.+.+ ++.+++++ ++||+++.|+|+++.+.|.+||++
T Consensus 254 i~G~~D-~~~~-~~~~~~~~~-~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~ 304 (318)
T 2psd_A 254 IESDPG-FFSN-AIVEGAKKF-PNTEFVKV-KGLHFLQEDAPDEMGKYIKSFVER 304 (318)
T ss_dssp EEEEEC-SSHH-HHHHHHTTS-SSEEEEEE-EESSSGGGTCHHHHHHHHHHHHHH
T ss_pred EEeccc-cCcH-HHHHHHHhC-CCcEEEEe-cCCCCCHhhCHHHHHHHHHHHHHH
Confidence 999999 8887 788888888 88899888 689999999999999999999975
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=215.49 Aligned_cols=217 Identities=13% Similarity=0.128 Sum_probs=161.0
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-cccHHHHHHHHHHHHHHhCC-ccEEEEEecc
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QRTELFQAASLGKLLEKIGV-ERFSVVGTSY 130 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~ 130 (273)
+|+|||+||++++. ..|..+++.|.+. |+|+++|+||||.|..+.. .++.++.++++.+++++++. ++++++|||+
T Consensus 4 g~~vv~lHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~ 82 (258)
T 3dqz_A 4 KHHFVLVHNAYHGA-WIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSLPENEEVILVGFSF 82 (258)
T ss_dssp CCEEEEECCTTCCG-GGGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTSCTTCCEEEEEETT
T ss_pred CCcEEEECCCCCcc-ccHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHhcccCceEEEEeCh
Confidence 48999999999999 8999999999887 9999999999999987644 37999999999999999987 9999999999
Q ss_pred chHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh---------------------------hhhhhccCCCC
Q 024042 131 GGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL---------------------------ERIDHLMLPES 183 (273)
Q Consensus 131 Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~ 183 (273)
||.+|+.++.++|++++++|++++.................. ......+....
T Consensus 83 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (258)
T 3dqz_A 83 GGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQNC 162 (258)
T ss_dssp HHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTS
T ss_pred hHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHHHHHhhccC
Confidence 999999999999999999999998665443322211111100 00000011111
Q ss_pred -hHHHHHHhhhhhccCCCC-------ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc
Q 024042 184 -ASQLRTLTGLAVSKNLDI-------VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255 (273)
Q Consensus 184 -~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 255 (273)
........ ......... ...........|+++++|++|.++|.+..+.+.+.+ ++.++++++++||+.+.
T Consensus 163 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~ 240 (258)
T 3dqz_A 163 PIEDYELAK-MLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNF-NVSKVYEIDGGDHMVML 240 (258)
T ss_dssp CHHHHHHHH-HHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHS-CCSCEEEETTCCSCHHH
T ss_pred CHHHHHHHH-HhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhC-CcccEEEcCCCCCchhh
Confidence 11111111 100000000 000001112459999999999999999999999999 88999999999999999
Q ss_pred CChhhHHHHHHHHhcccC
Q 024042 256 ENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 256 ~~~~~~~~~i~~fl~~~l 273 (273)
++|+++.+.|.+|+++.+
T Consensus 241 ~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 241 SKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp HSHHHHHHHHHHHHHHTC
T ss_pred cChHHHHHHHHHHHHHhC
Confidence 999999999999998864
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=220.50 Aligned_cols=233 Identities=14% Similarity=0.160 Sum_probs=173.2
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcc----
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ---- 101 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~---- 101 (273)
+..++++ +|.+++|+..+ ++|+|||+||++++. ..|..+++.|+++|+|+++|+||||.|..+...
T Consensus 9 ~~~~~~~-~g~~l~~~~~g--------~~~~vv~lHG~~~~~-~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 78 (297)
T 2qvb_A 9 QPKYLEI-AGKRMAYIDEG--------KGDAIVFQHGNPTSS-YLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDR 78 (297)
T ss_dssp CCEEEEE-TTEEEEEEEES--------SSSEEEEECCTTCCG-GGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTS
T ss_pred CceEEEE-CCEEEEEEecC--------CCCeEEEECCCCchH-HHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCCccccC
Confidence 4566777 89999999986 368999999999998 889999999988899999999999999877655
Q ss_pred ccHHHHHHHHHHHHHHhCC-ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc-----chHHHhhhhhhh--
Q 024042 102 RTELFQAASLGKLLEKIGV-ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG-----DNEALVKRANLE-- 173 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~-----~~~~~~~~~~~~-- 173 (273)
++.++.++++.+++++++. ++++++|||+||.+|+.++.++|++++++|++++....... ............
T Consensus 79 ~~~~~~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (297)
T 2qvb_A 79 YSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQG 158 (297)
T ss_dssp SCHHHHHHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTTH
T ss_pred cCHHHHHHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhcccc
Confidence 7999999999999999999 99999999999999999999999999999999987642210 001110000000
Q ss_pred ------------hh-hhc-cCCCChHHHHHHhhhhhc-------------cC-----------CCCChhhHHhhhhccEE
Q 024042 174 ------------RI-DHL-MLPESASQLRTLTGLAVS-------------KN-----------LDIVPDFFFNDFVHDVL 215 (273)
Q Consensus 174 ------------~~-~~~-~~~~~~~~~~~~~~~~~~-------------~~-----------~~~~~~~~~~~~~~p~l 215 (273)
.. ... .................. .. ........+.++..|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 238 (297)
T 2qvb_A 159 EPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKL 238 (297)
T ss_dssp HHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEE
T ss_pred hhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccccEE
Confidence 00 000 011111111111110000 00 00011223455677999
Q ss_pred EEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 216 IVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 216 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+++|++|.++|.+..+.+.+.+ ++ +++++ ++||+.+.++|+++.+.|.+||++
T Consensus 239 ii~G~~D~~~~~~~~~~~~~~~-~~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~ 291 (297)
T 2qvb_A 239 FINAEPGAIITGRIRDYVRSWP-NQ-TEITV-PGVHFVQEDSPEEIGAAIAQFVRR 291 (297)
T ss_dssp EEEEEECSSSCHHHHHHHHTSS-SE-EEEEE-EESSCGGGTCHHHHHHHHHHHHHH
T ss_pred EEecCCCCcCCHHHHHHHHHHc-CC-eEEEe-cCccchhhhCHHHHHHHHHHHHHH
Confidence 9999999999999999999888 77 99999 999999999999999999999975
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=215.28 Aligned_cols=218 Identities=16% Similarity=0.144 Sum_probs=154.7
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcC-CCeEEeecCCCCCCCCCCCc-cccHHHHHHHHHHHHHHhC-CccEEEEEec
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHSTTRSI-QRTELFQAASLGKLLEKIG-VERFSVVGTS 129 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S 129 (273)
.+++|||+||++.+. ..|..+++.|++ +|+|+++|+||||.|+.... .++.+++++++.++++.++ .++++|+|||
T Consensus 3 ~~~~vvllHG~~~~~-~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhS 81 (273)
T 1xkl_A 3 EGKHFVLVHGACHGG-WSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHS 81 (273)
T ss_dssp CCCEEEEECCTTCCG-GGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSSSCEEEEEET
T ss_pred CCCeEEEECCCCCCc-chHHHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHhccCCCEEEEecC
Confidence 457999999999888 899999999975 49999999999999976433 4689999999999999997 5899999999
Q ss_pred cchHHHHHHHHhCCcccceEEEecCCCCCCCcch-H---HHhhhhhhh-hhhh---cc----C-----CCChHHHHHH--
Q 024042 130 YGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN-E---ALVKRANLE-RIDH---LM----L-----PESASQLRTL-- 190 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~-~---~~~~~~~~~-~~~~---~~----~-----~~~~~~~~~~-- 190 (273)
|||.+|+.+|.++|++|+++|++++......... . ......... .... .. . ..........
T Consensus 82 mGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
T 1xkl_A 82 LGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLY 161 (273)
T ss_dssp THHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHTS
T ss_pred HHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCHHHHHHHhh
Confidence 9999999999999999999999997532221111 1 111100000 0000 00 0 0001111000
Q ss_pred ---------hhhhhccCCCCChhh------H--HhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCc
Q 024042 191 ---------TGLAVSKNLDIVPDF------F--FNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVP 253 (273)
Q Consensus 191 ---------~~~~~~~~~~~~~~~------~--~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 253 (273)
............... . ......|+++|+|++|.++|++..+.+.+.+ ++.++++++++||++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~-p~~~~~~i~~aGH~~ 240 (273)
T 1xkl_A 162 QLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI-GVTEAIEIKGADHMA 240 (273)
T ss_dssp TTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHH-CCSEEEEETTCCSCH
T ss_pred ccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhC-CCCeEEEeCCCCCCc
Confidence 000000000000000 0 0012459999999999999999999999999 899999999999999
Q ss_pred CcCChhhHHHHHHHHhccc
Q 024042 254 QIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 254 ~~~~~~~~~~~i~~fl~~~ 272 (273)
+.|+|+++++.|.+|+++.
T Consensus 241 ~~e~P~~~~~~i~~fl~~~ 259 (273)
T 1xkl_A 241 MLCEPQKLCASLLEIAHKY 259 (273)
T ss_dssp HHHSHHHHHHHHHHHHHHC
T ss_pred hhcCHHHHHHHHHHHHHHh
Confidence 9999999999999999753
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=222.32 Aligned_cols=235 Identities=17% Similarity=0.209 Sum_probs=175.9
Q ss_pred hCCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCC
Q 024042 22 SAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRS 99 (273)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~ 99 (273)
..+++...++. +|.+++|+.++ +.+++.|+||++||++++. ...|..+++.|.+. |.|+++|+||+|.|....
T Consensus 19 ~~~~~~~~~~~-~g~~l~~~~~~----p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 93 (270)
T 3pfb_A 19 FQGMATITLER-DGLQLVGTREE----PFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKF 93 (270)
T ss_dssp CCEEEEEEEEE-TTEEEEEEEEE----CSSSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCG
T ss_pred eccceEEEecc-CCEEEEEEEEc----CCCCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCC
Confidence 34556667776 99999999987 3344578999999999773 26788999988776 999999999999999877
Q ss_pred ccccHHHHHHHHHHHHHHh----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhh
Q 024042 100 IQRTELFQAASLGKLLEKI----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERI 175 (273)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (273)
...+....++++.++++.+ +.++++++|||+||.+|+.++.++|++++++|+++|....... ...........
T Consensus 94 ~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~---~~~~~~~~~~~ 170 (270)
T 3pfb_A 94 ENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGD---ALEGNTQGVTY 170 (270)
T ss_dssp GGCCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHH---HHHTEETTEEC
T ss_pred CccCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchh---hhhhhhhcccc
Confidence 7788889999999999987 6689999999999999999999999999999999987643210 00000000000
Q ss_pred hhccCC--------CChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeC
Q 024042 176 DHLMLP--------ESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIE 247 (273)
Q Consensus 176 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (273)
.....+ ........... ..........+..|+++++|++|.++|.+..+.+.+.+ +++++++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~ 242 (270)
T 3pfb_A 171 NPDHIPDRLPFKDLTLGGFYLRIAQ-------QLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIY-QNSTLHLIE 242 (270)
T ss_dssp CTTSCCSEEEETTEEEEHHHHHHHH-------HCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHC-SSEEEEEET
T ss_pred CcccccccccccccccchhHhhccc-------ccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhC-CCCeEEEcC
Confidence 000000 00000000000 01223345566779999999999999999999999998 899999999
Q ss_pred CCCCCcCcCChhhHHHHHHHHhccc
Q 024042 248 NTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 248 ~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
++||+++.++++++.+.|.+||+++
T Consensus 243 ~~gH~~~~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 243 GADHCFSDSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp TCCTTCCTHHHHHHHHHHHHHHC--
T ss_pred CCCcccCccchHHHHHHHHHHHhhc
Confidence 9999999899999999999999864
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=217.67 Aligned_cols=238 Identities=16% Similarity=0.186 Sum_probs=164.9
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhH-hHHH-----HHHhhcCCCeEEeecCCCCCCCCCC-
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIW-QWRK-----QVQFFAPHFNVYVPDLIFFGHSTTR- 98 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~-~~~~-----~~~~l~~~~~v~~~d~~g~g~s~~~- 98 (273)
..++..+ +|.+++|...| ++..++|+|||+||++++. . .|.. +++.|+++|+|+++|+||||.|...
T Consensus 12 ~~~~~~~-~~~~l~y~~~G----~~~~~~p~vvllHG~~~~~-~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~s~~~~ 85 (286)
T 2qmq_A 12 HTHSVET-PYGSVTFTVYG----TPKPKRPAIFTYHDVGLNY-KSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVF 85 (286)
T ss_dssp EEEEEEE-TTEEEEEEEES----CCCTTCCEEEEECCTTCCH-HHHHHHHHTSHHHHHHHTTSCEEEEECTTTSTTCCCC
T ss_pred ccccccc-CCeEEEEEecc----CCCCCCCeEEEeCCCCCCc-hhhhhhhhhhchhHHHhcCCCEEEecCCCCCCCCCCC
Confidence 3456666 89999999987 2223678999999999988 5 3665 7888988899999999999987643
Q ss_pred Ccc---ccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhh----
Q 024042 99 SIQ---RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRAN---- 171 (273)
Q Consensus 99 ~~~---~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~---- 171 (273)
... ++.+++++++.++++.++.++++++|||+||.+|+.+|.++|++++++|++++........ ........
T Consensus 86 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~ 164 (286)
T 2qmq_A 86 PLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWM-DWAAHKLTGLTS 164 (286)
T ss_dssp CTTCCCCCHHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHH-HHHHHHHHHTTS
T ss_pred CCCCCccCHHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchh-hhhhhhhccccc
Confidence 222 3899999999999999999999999999999999999999999999999999866432211 00000000
Q ss_pred --hhh-hhhccC----CCChHHHHHHhhhh---------------hccCCCC-ChhhHHhhhhccEEEEecCCCCCCChH
Q 024042 172 --LER-IDHLML----PESASQLRTLTGLA---------------VSKNLDI-VPDFFFNDFVHDVLIVWGDQDQIFPLK 228 (273)
Q Consensus 172 --~~~-~~~~~~----~~~~~~~~~~~~~~---------------~~~~~~~-~~~~~~~~~~~p~l~i~g~~D~~~~~~ 228 (273)
... ....+. .............. ....... .....+.++..|+|+++|++|.++| .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~ 243 (286)
T 2qmq_A 165 SIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-A 243 (286)
T ss_dssp CHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-H
T ss_pred cchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-H
Confidence 000 000000 00000111110000 0000000 1122345666799999999999987 4
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 229 MATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
..+.+.+..++++++++++++||+++.++|+++.+.|.+||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 286 (286)
T 2qmq_A 244 VVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQG 286 (286)
T ss_dssp HHHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHHHHHHCC
T ss_pred HHHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHHHHHhcC
Confidence 4555555552289999999999999999999999999999964
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=213.18 Aligned_cols=215 Identities=19% Similarity=0.195 Sum_probs=153.8
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCC-ccccHHHHHHHHHHHHHHhC-CccEEEEEecc
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRS-IQRTELFQAASLGKLLEKIG-VERFSVVGTSY 130 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~ 130 (273)
+++|||+||++.+. ..|+.+++.|++. |+|+++|+||||.|..+. ..++.+++++++.+++++++ .++++|+||||
T Consensus 3 ~~~vvllHG~~~~~-~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSm 81 (257)
T 3c6x_A 3 FAHFVLIHTICHGA-WIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESC 81 (257)
T ss_dssp CCEEEEECCTTCCG-GGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSCTTCCEEEEEEET
T ss_pred CCcEEEEcCCccCc-CCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhccccCCeEEEEECc
Confidence 57899999999888 8999999999765 999999999999997643 34689999999999999995 58999999999
Q ss_pred chHHHHHHHHhCCcccceEEEecCCCCCCCcch-H---HHhhhhh--hhhhh---------------------hccCCCC
Q 024042 131 GGFVAYHMARMWPERVEKVVIASSGVNMKRGDN-E---ALVKRAN--LERID---------------------HLMLPES 183 (273)
Q Consensus 131 Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~-~---~~~~~~~--~~~~~---------------------~~~~~~~ 183 (273)
||.+++.+|.++|++|+++|++++......... . ....... ..... .......
T Consensus 82 GG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (257)
T 3c6x_A 82 GGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLC 161 (257)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTS
T ss_pred chHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHHHHHHHHhcCC
Confidence 999999999999999999999997532211111 1 1111000 00000 0000000
Q ss_pred hHHHHHHhhhhhccCCCCChhh------H-Hh-hhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc
Q 024042 184 ASQLRTLTGLAVSKNLDIVPDF------F-FN-DFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255 (273)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~------~-~~-~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 255 (273)
.......... ........... . .. ....|+|+|+|++|.++|.+..+.+.+.+ ++.++++++++||+++.
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~-~~~~~~~i~~~gH~~~~ 239 (257)
T 3c6x_A 162 GPEEYELAKM-LTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENY-KPDKVYKVEGGDHKLQL 239 (257)
T ss_dssp CHHHHHHHHH-HCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHS-CCSEEEECCSCCSCHHH
T ss_pred CHHHHHHHHH-hcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHC-CCCeEEEeCCCCCCccc
Confidence 0000000000 00000000000 0 00 11459999999999999999999999999 89999999999999999
Q ss_pred CChhhHHHHHHHHhcc
Q 024042 256 ENPGLFNSIVKNFLRG 271 (273)
Q Consensus 256 ~~~~~~~~~i~~fl~~ 271 (273)
|+|+++++.|.+|+++
T Consensus 240 e~P~~~~~~l~~f~~~ 255 (257)
T 3c6x_A 240 TKTKEIAEILQEVADT 255 (257)
T ss_dssp HSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999999999975
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=219.48 Aligned_cols=233 Identities=18% Similarity=0.201 Sum_probs=170.0
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCC-CCccccHHH
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTT-RSIQRTELF 106 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~-~~~~~~~~~ 106 (273)
....+ ++.+++|+.++ +++|+||++||++++. ..|..++..| +|+|+++|+||+|.|.. ....++.++
T Consensus 63 ~~~~~-~~~~~~~~~~g-------~~~~~vv~~hG~~~~~-~~~~~~~~~l--g~~Vi~~D~~G~G~S~~~~~~~~~~~~ 131 (330)
T 3p2m_A 63 EVERV-QAGAISALRWG-------GSAPRVIFLHGGGQNA-HTWDTVIVGL--GEPALAVDLPGHGHSAWREDGNYSPQL 131 (330)
T ss_dssp CEEEE-EETTEEEEEES-------SSCCSEEEECCTTCCG-GGGHHHHHHS--CCCEEEECCTTSTTSCCCSSCBCCHHH
T ss_pred Cceee-cCceEEEEEeC-------CCCCeEEEECCCCCcc-chHHHHHHHc--CCeEEEEcCCCCCCCCCCCCCCCCHHH
Confidence 34445 66689999886 3468999999999998 8999999888 79999999999999984 445678999
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH------HHhhhh-------h--
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE------ALVKRA-------N-- 171 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~------~~~~~~-------~-- 171 (273)
.++++.++++.++.++++++|||+||.+|+.+|.++|++++++|++++.......... ...... .
T Consensus 132 ~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (330)
T 3p2m_A 132 NSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQ 211 (330)
T ss_dssp HHHHHHHHHHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCHH
T ss_pred HHHHHHHHHHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCHH
Confidence 9999999999999999999999999999999999999999999999975432110000 000000 0
Q ss_pred --hhhhhhccCCCChHHHHHHhhhhhccC-----------C-CC--C--hhhHHhhhhccEEEEecCCCCCCChHHHHHH
Q 024042 172 --LERIDHLMLPESASQLRTLTGLAVSKN-----------L-DI--V--PDFFFNDFVHDVLIVWGDQDQIFPLKMATEL 233 (273)
Q Consensus 172 --~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~--~--~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~ 233 (273)
........................... . .. . ....+.++..|+|+++|++|.++|.+..+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l 291 (330)
T 3p2m_A 212 AMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAEL 291 (330)
T ss_dssp HHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHH
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHHHHHH
Confidence 000000001111111211111110000 0 00 0 1134567778999999999999999999999
Q ss_pred HHHhcCCcE-EEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 234 KELLGKKAR-LEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 234 ~~~~~~~~~-~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.+.+ ++.+ +++++++||+.+.++|+++.+.|.+||+++
T Consensus 292 ~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 330 (330)
T 3p2m_A 292 HRRA-THFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDTR 330 (330)
T ss_dssp HHHC-SSEEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC-
T ss_pred HHhC-CCCeeEEEeCCCCCCcchhCHHHHHHHHHHHHhcC
Confidence 9999 8889 999999999999999999999999999864
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=218.41 Aligned_cols=234 Identities=14% Similarity=0.178 Sum_probs=172.8
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcc----
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ---- 101 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~---- 101 (273)
+.+.++. +|.+++|...+ ++|+||++||++++. ..|..+++.|+++|+|+++|+||+|.|..+...
T Consensus 10 ~~~~~~~-~g~~l~~~~~g--------~~~~vv~lHG~~~~~-~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~ 79 (302)
T 1mj5_A 10 EKKFIEI-KGRRMAYIDEG--------TGDPILFQHGNPTSS-YLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPER 79 (302)
T ss_dssp CCEEEEE-TTEEEEEEEES--------CSSEEEEECCTTCCG-GGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTS
T ss_pred cceEEEE-CCEEEEEEEcC--------CCCEEEEECCCCCch-hhhHHHHHHhccCCeEEEEcCCCCCCCCCCCCCCccc
Confidence 3456666 89999999886 368999999999998 899999999988899999999999999877655
Q ss_pred ccHHHHHHHHHHHHHHhCC-ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc-----chHHHhhhhhhh--
Q 024042 102 RTELFQAASLGKLLEKIGV-ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG-----DNEALVKRANLE-- 173 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~-----~~~~~~~~~~~~-- 173 (273)
++.+++++++.++++.++. ++++++|||+||.+|+.++.++|++++++|++++....... ............
T Consensus 80 ~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (302)
T 1mj5_A 80 YAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAG 159 (302)
T ss_dssp SCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTH
T ss_pred ccHHHHHHHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccch
Confidence 7999999999999999998 99999999999999999999999999999999987642210 011111000000
Q ss_pred --------hh-----hh-ccCCCChHHHHHHhhhhhc------------cCCC------------CChhhHHhhhhccEE
Q 024042 174 --------RI-----DH-LMLPESASQLRTLTGLAVS------------KNLD------------IVPDFFFNDFVHDVL 215 (273)
Q Consensus 174 --------~~-----~~-~~~~~~~~~~~~~~~~~~~------------~~~~------------~~~~~~~~~~~~p~l 215 (273)
.+ .. ................... .... ......+.++..|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 239 (302)
T 1mj5_A 160 EELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKL 239 (302)
T ss_dssp HHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEE
T ss_pred hhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCCCeE
Confidence 00 00 0001111111111110000 0000 001223345667999
Q ss_pred EEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 216 IVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 216 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+++|++|.++|.+..+.+.+.+ ++ +++++ ++||+.+.++|+++.+.|.+|+++.
T Consensus 240 ~i~g~~D~~~~~~~~~~~~~~~-~~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~ 293 (302)
T 1mj5_A 240 FINAEPGALTTGRMRDFCRTWP-NQ-TEITV-AGAHFIQEDSPDEIGAAIAAFVRRL 293 (302)
T ss_dssp EEEEEECSSSSHHHHHHHTTCS-SE-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCChHHHHHHHHhc-CC-ceEEe-cCcCcccccCHHHHHHHHHHHHHhh
Confidence 9999999999999999998888 77 99999 9999999999999999999999753
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=219.11 Aligned_cols=236 Identities=17% Similarity=0.247 Sum_probs=171.4
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHh-hcCCCeEEeecCCCCCCCCCCC---c
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQF-FAPHFNVYVPDLIFFGHSTTRS---I 100 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~-l~~~~~v~~~d~~g~g~s~~~~---~ 100 (273)
++.+++++++| +++|+..+ +++|+|||+||++++. ..|..+++. +.++|+|+++|+||+|.|.... .
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~-------~~~~~vv~lHG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 73 (279)
T 4g9e_A 3 INYHELETSHG-RIAVRESE-------GEGAPLLMIHGNSSSG-AIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDR 73 (279)
T ss_dssp CEEEEEEETTE-EEEEEECC-------CCEEEEEEECCTTCCG-GGGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHH
T ss_pred eEEEEEEcCCc-eEEEEecC-------CCCCeEEEECCCCCch-hHHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCccc
Confidence 56778888555 88888874 3568999999999999 899999988 5555999999999999998753 3
Q ss_pred cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh--------
Q 024042 101 QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL-------- 172 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~-------- 172 (273)
.++.++.++++.++++.++.++++++|||+||.+|+.++.++|+ +.++|+++++.................
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (279)
T 4g9e_A 74 SYSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIF 152 (279)
T ss_dssp HSSHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCC
T ss_pred CCCHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCcccc
Confidence 46889999999999999999999999999999999999999998 888888887654432211000000000
Q ss_pred -----h-hhhhccCCCChHHHHHH-----------hhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHH-
Q 024042 173 -----E-RIDHLMLPESASQLRTL-----------TGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELK- 234 (273)
Q Consensus 173 -----~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~- 234 (273)
. ................. ....+.............++..|+|+++|++|.++|.+..+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 232 (279)
T 4g9e_A 153 SERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKF 232 (279)
T ss_dssp CHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCC
T ss_pred cHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhh
Confidence 0 00000000000000000 00001111122333445667789999999999999999888887
Q ss_pred HHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 235 ELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 235 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+.. +++++++++++||+.+.++|+++.+.|.+||++
T Consensus 233 ~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (279)
T 4g9e_A 233 GNL-WEGKTHVIDNAGHAPFREAPAEFDAYLARFIRD 268 (279)
T ss_dssp SSB-GGGSCEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred ccC-CCCeEEEECCCCcchHHhCHHHHHHHHHHHHHH
Confidence 555 789999999999999999999999999999975
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-34 Score=214.57 Aligned_cols=227 Identities=17% Similarity=0.242 Sum_probs=165.2
Q ss_pred eEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCC----CCccccHHHHHHHHH
Q 024042 37 TLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTT----RSIQRTELFQAASLG 112 (273)
Q Consensus 37 ~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~----~~~~~~~~~~~~~~~ 112 (273)
+++|...+ +++|+|||+||++++. ..|..+++.|.++|+|+++|+||+|.|.. .....+.++.++++.
T Consensus 10 ~l~~~~~g-------~~~p~vv~~HG~~~~~-~~~~~~~~~l~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~ 81 (269)
T 4dnp_A 10 ALNVRVVG-------SGERVLVLAHGFGTDQ-SAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLL 81 (269)
T ss_dssp HTTCEEEC-------SCSSEEEEECCTTCCG-GGGTTTGGGGTTTCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHH
T ss_pred HhhhhhcC-------CCCCEEEEEeCCCCcH-HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHH
Confidence 35566654 3568999999999998 89999999998899999999999999975 223348899999999
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc-------hH---HHhhhhh--h----hhh-
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD-------NE---ALVKRAN--L----ERI- 175 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-------~~---~~~~~~~--~----~~~- 175 (273)
++++.++.++++++|||+||.+|+.++.++|++++++|++++........ .. ....... . ..+
T Consensus 82 ~~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (269)
T 4dnp_A 82 HILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFA 161 (269)
T ss_dssp HHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHhcCCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhh
Confidence 99999999999999999999999999999999999999999865432211 00 0000000 0 000
Q ss_pred hhccCCCChHHHHHHhhhhhccC-----------CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC-cEE
Q 024042 176 DHLMLPESASQLRTLTGLAVSKN-----------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK-ARL 243 (273)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~ 243 (273)
....................... ..........++..|+++++|++|.++|.+..+.+.+.+ ++ +++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~ 240 (269)
T 4dnp_A 162 PLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHL-GGKNTV 240 (269)
T ss_dssp HHHHCSSCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHS-SSCEEE
T ss_pred hhhccCCChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhC-CCCceE
Confidence 00111111111111111111000 011222345566779999999999999999999999999 66 899
Q ss_pred EEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 244 EIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 244 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
++++++||+.+.++|+++.+.|.+||+++
T Consensus 241 ~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 269 (269)
T 4dnp_A 241 HWLNIEGHLPHLSAPTLLAQELRRALSHR 269 (269)
T ss_dssp EEEEEESSCHHHHCHHHHHHHHHHHHC--
T ss_pred EEeCCCCCCccccCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999864
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-34 Score=215.93 Aligned_cols=228 Identities=19% Similarity=0.217 Sum_probs=168.3
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHH-HHHHhh-cCCCeEEeecCCCCCCCCCCCccccHHHHHHHH
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWR-KQVQFF-APHFNVYVPDLIFFGHSTTRSIQRTELFQAASL 111 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~-~~~~~l-~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 111 (273)
+|.+++|...| ++|+||++||++++. ..|. .++..| .++|+|+++|+||+|.|..+ ..++.++.++++
T Consensus 31 ~~~~l~y~~~g--------~~~~vv~lHG~~~~~-~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~-~~~~~~~~~~~~ 100 (293)
T 3hss_A 31 RVINLAYDDNG--------TGDPVVFIAGRGGAG-RTWHPHQVPAFLAAGYRCITFDNRGIGATENA-EGFTTQTMVADT 100 (293)
T ss_dssp CEEEEEEEEEC--------SSEEEEEECCTTCCG-GGGTTTTHHHHHHTTEEEEEECCTTSGGGTTC-CSCCHHHHHHHH
T ss_pred ccceEEEEEcC--------CCCEEEEECCCCCch-hhcchhhhhhHhhcCCeEEEEccCCCCCCCCc-ccCCHHHHHHHH
Confidence 78889998875 567999999999998 8888 567766 45599999999999988754 357899999999
Q ss_pred HHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhh--------------hhh
Q 024042 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLER--------------IDH 177 (273)
Q Consensus 112 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~ 177 (273)
.++++.++.++++++|||+||.+|+.+|.++|++++++|++++.................... ...
T Consensus 101 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (293)
T 3hss_A 101 AALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLE 180 (293)
T ss_dssp HHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHHHHhcCCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhh
Confidence 999999999999999999999999999999999999999999876543221100000000000 000
Q ss_pred ccC---CCChHHHHHHhhhh--------------hccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC
Q 024042 178 LML---PESASQLRTLTGLA--------------VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK 240 (273)
Q Consensus 178 ~~~---~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~ 240 (273)
... .............. ..............++..|+++++|++|.++|.+..+.+.+.+ ++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~-~~ 259 (293)
T 3hss_A 181 NFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADAL-PN 259 (293)
T ss_dssp HSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHS-TT
T ss_pred hcccccccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHC-CC
Confidence 000 00000000000000 0001112233445667779999999999999999999999999 89
Q ss_pred cEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 241 ARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 241 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.++++++++||+.+.++|+++.+.|.+||++.
T Consensus 260 ~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 260 GRYLQIPDAGHLGFFERPEAVNTAMLKFFASV 291 (293)
T ss_dssp EEEEEETTCCTTHHHHSHHHHHHHHHHHHHTC
T ss_pred ceEEEeCCCcchHhhhCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999863
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=208.64 Aligned_cols=212 Identities=15% Similarity=0.201 Sum_probs=145.1
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHH---HHHHHHhCCccEEEEEec
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASL---GKLLEKIGVERFSVVGTS 129 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~l~G~S 129 (273)
+|+|||+||++++. ..|..+++.|++. |+|+++|+||||.|......++.+++++++ .+++++++.++++|+|||
T Consensus 16 ~~~vvllHG~~~~~-~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~lvG~S 94 (247)
T 1tqh_A 16 ERAVLLLHGFTGNS-ADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLS 94 (247)
T ss_dssp SCEEEEECCTTCCT-HHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEEET
T ss_pred CcEEEEECCCCCCh-HHHHHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHHHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 47899999999998 8899999999765 999999999999765332234666655554 456677788999999999
Q ss_pred cchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhh--hhhhhhhccCCCChHHHHHHhhhhhccCCC-------
Q 024042 130 YGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA--NLERIDHLMLPESASQLRTLTGLAVSKNLD------- 200 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 200 (273)
|||.+|+.+|.++| ++++|+++++...... ....... ........ .....................
T Consensus 95 mGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (247)
T 1tqh_A 95 LGGVFSLKLGYTVP--IEGIVTMCAPMYIKSE--ETMYEGVLEYAREYKKR-EGKSEEQIEQEMEKFKQTPMKTLKALQE 169 (247)
T ss_dssp HHHHHHHHHHTTSC--CSCEEEESCCSSCCCH--HHHHHHHHHHHHHHHHH-HTCCHHHHHHHHHHHTTSCCTTHHHHHH
T ss_pred HHHHHHHHHHHhCC--CCeEEEEcceeecCcc--hhhhHHHHHHHHHhhcc-cccchHHHHhhhhcccCCCHHHHHHHHH
Confidence 99999999999998 9999987765432211 1100000 00000000 001111111111100000000
Q ss_pred --CChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC--cEEEEeCCCCCCcCcCC-hhhHHHHHHHHhccc
Q 024042 201 --IVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK--ARLEIIENTSHVPQIEN-PGLFNSIVKNFLRGS 272 (273)
Q Consensus 201 --~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~~ 272 (273)
......+.++..|+|+++|++|.++|.+.++.+.+.+ ++ +++++++++||+++.++ |+++.+.|.+||++.
T Consensus 170 ~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 170 LIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEI-ESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 245 (247)
T ss_dssp HHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHC-CCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred HHHHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhc-CCCceEEEEeCCCceeeccCccHHHHHHHHHHHHHhc
Confidence 0011234566779999999999999999999999998 54 69999999999998875 799999999999753
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=213.87 Aligned_cols=221 Identities=23% Similarity=0.300 Sum_probs=153.6
Q ss_pred eEEeecCCccCCCCCCCCC-eEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHH
Q 024042 37 TLHFWGPKLEDDHKTLKKP-SLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLL 115 (273)
Q Consensus 37 ~l~~~~~~~~~~~~~~~~~-~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~ 115 (273)
+++|...| ++| +|||+||++++. ..|..+++.|+++|+|+++|+||||.|... ..++.+++++++.+
T Consensus 3 ~l~~~~~G--------~g~~~vvllHG~~~~~-~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~-~~~~~~~~~~~l~~-- 70 (258)
T 1m33_A 3 NIWWQTKG--------QGNVHLVLLHGWGLNA-EVWRCIDEELSSHFTLHLVDLPGFGRSRGF-GALSLADMAEAVLQ-- 70 (258)
T ss_dssp CCCEEEEC--------CCSSEEEEECCTTCCG-GGGGGTHHHHHTTSEEEEECCTTSTTCCSC-CCCCHHHHHHHHHT--
T ss_pred ceEEEEec--------CCCCeEEEECCCCCCh-HHHHHHHHHhhcCcEEEEeeCCCCCCCCCC-CCcCHHHHHHHHHH--
Confidence 56777765 245 899999999998 899999999988899999999999999876 45677777666544
Q ss_pred HHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc------h---HHHhhhhh------hhhhhh-c-
Q 024042 116 EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD------N---EALVKRAN------LERIDH-L- 178 (273)
Q Consensus 116 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~------~---~~~~~~~~------~~~~~~-~- 178 (273)
.++ ++++|+||||||.+|+.+|.++|++++++|++++........ . ..+..... ...+.. .
T Consensus 71 -~l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (258)
T 1m33_A 71 -QAP-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQT 148 (258)
T ss_dssp -TSC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred -HhC-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 345 899999999999999999999999999999998753322110 0 00000000 000000 0
Q ss_pred cCCCCh-HHHHHHhhhhhccCC--------------CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEE
Q 024042 179 MLPESA-SQLRTLTGLAVSKNL--------------DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARL 243 (273)
Q Consensus 179 ~~~~~~-~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 243 (273)
...... ............... .......+.++..|+++++|++|.++|.+..+.+.+.+ ++.++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~ 227 (258)
T 1m33_A 149 MGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSES 227 (258)
T ss_dssp TTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTC-TTCEE
T ss_pred cCCccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhC-ccceE
Confidence 000011 111111000000000 00111234566779999999999999998888888777 88999
Q ss_pred EEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 244 EIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 244 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
++++++||+++.++|+++.+.|.+|+++.
T Consensus 228 ~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 228 YIFAKAAHAPFISHPAEFCHLLVALKQRV 256 (258)
T ss_dssp EEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred EEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999763
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=209.97 Aligned_cols=238 Identities=17% Similarity=0.160 Sum_probs=169.8
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc-ccHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ-RTELF 106 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~-~~~~~ 106 (273)
.+...+|.+++|+.++ +.++++|+||++||++++. ..|..+++.|.+. |+|+++|+||+|.|...... .+..+
T Consensus 21 ~~~~~~g~~l~~~~~~----~~~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 95 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWA----PTGTPKALIFVSHGAGEHS-GRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHV 95 (303)
T ss_dssp EEECTTSCEEEEEEEC----CSSCCSEEEEEECCTTCCG-GGGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTCCSSTHH
T ss_pred eEecCCCeEEEEEEec----cCCCCCeEEEEECCCCchh-hHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCCCCCHHH
Confidence 6667799999999887 3345678999999999998 8999999999885 99999999999999865433 57778
Q ss_pred HHHHHHHHHHHhCC----ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhh--hhh------
Q 024042 107 QAASLGKLLEKIGV----ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRAN--LER------ 174 (273)
Q Consensus 107 ~~~~~~~~~~~~~~----~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~--~~~------ 174 (273)
.++++.++++.+.. ++++++|||+||.+|+.++.++|++++++|++++................. ...
T Consensus 96 ~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (303)
T 3pe6_A 96 FVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNSVLPNLS 175 (303)
T ss_dssp HHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHHTTCCSCC
T ss_pred HHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHHHhccccc
Confidence 88888888887643 489999999999999999999999999999999877654322111111000 000
Q ss_pred ---hhhccCCCChHHHHHHhhhhhccCCCC-------------ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc
Q 024042 175 ---IDHLMLPESASQLRTLTGLAVSKNLDI-------------VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG 238 (273)
Q Consensus 175 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~ 238 (273)
........................... .......++..|+++++|++|.+++.+..+.+.+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~- 254 (303)
T 3pe6_A 176 SGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELA- 254 (303)
T ss_dssp CCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBCHHHHHHHHHHC-
T ss_pred CCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCChHHHHHHHHhc-
Confidence 000011111222222111111100000 011234556679999999999999999999999998
Q ss_pred C--CcEEEEeCCCCCCcCcCChhhH---HHHHHHHhccc
Q 024042 239 K--KARLEIIENTSHVPQIENPGLF---NSIVKNFLRGS 272 (273)
Q Consensus 239 ~--~~~~~~~~~~gH~~~~~~~~~~---~~~i~~fl~~~ 272 (273)
+ +.++++++++||+.+.++|+++ .+.+.+||+++
T Consensus 255 ~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~ 293 (303)
T 3pe6_A 255 KSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR 293 (303)
T ss_dssp CCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhcc
Confidence 5 7899999999999999998754 44567777764
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=211.83 Aligned_cols=238 Identities=17% Similarity=0.156 Sum_probs=170.4
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCC-ccccHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRS-IQRTELF 106 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~-~~~~~~~ 106 (273)
.+...+|.+++|+.++ +.+.++|+||++||++++. ..|..+++.|.+. |.|+++|+||+|.|.... ...+...
T Consensus 39 ~~~~~dg~~l~~~~~~----p~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 113 (342)
T 3hju_A 39 HLVNADGQYLFCRYWK----PTGTPKALIFVSHGAGEHS-GRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHV 113 (342)
T ss_dssp EEECTTSCEEEEEEEC----CSSCCSEEEEEECCTTCCG-GGGHHHHHHHHTTTEEEEEECCTTSTTSCSSTTCCSCTHH
T ss_pred eEEccCCeEEEEEEeC----CCCCCCcEEEEECCCCccc-chHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCCCcCcHHH
Confidence 6777799999999986 3345678999999999998 8999999999885 999999999999998654 3457778
Q ss_pred HHHHHHHHHHHhCC----ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhh---hh------
Q 024042 107 QAASLGKLLEKIGV----ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRAN---LE------ 173 (273)
Q Consensus 107 ~~~~~~~~~~~~~~----~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~---~~------ 173 (273)
.++++.++++.+.. ++++++|||+||.+++.++.++|++++++|++++................. ..
T Consensus 114 ~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (342)
T 3hju_A 114 FVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNLVLPNLS 193 (342)
T ss_dssp HHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHHHHHHHHCTTCB
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHHHHHHHhccccc
Confidence 88888888887643 499999999999999999999999999999999987654432111111000 00
Q ss_pred --hhhhccCCCChHHHHHHhhhhhccCCCC-------------ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc
Q 024042 174 --RIDHLMLPESASQLRTLTGLAVSKNLDI-------------VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG 238 (273)
Q Consensus 174 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~ 238 (273)
............................ .....+.++..|+|+++|++|.+++.+..+.+.+.+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~ 273 (342)
T 3hju_A 194 LGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAK 273 (342)
T ss_dssp CCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCC
T ss_pred cCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccChHHHHHHHHHcC
Confidence 0000111112222222211111110000 0112345566799999999999999999999999982
Q ss_pred -CCcEEEEeCCCCCCcCcCChhhHH---HHHHHHhcc
Q 024042 239 -KKARLEIIENTSHVPQIENPGLFN---SIVKNFLRG 271 (273)
Q Consensus 239 -~~~~~~~~~~~gH~~~~~~~~~~~---~~i~~fl~~ 271 (273)
+++++++++++||+.+.++|+++. +.+.+||++
T Consensus 274 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~ 310 (342)
T 3hju_A 274 SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQ 310 (342)
T ss_dssp CSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhc
Confidence 279999999999999999987544 446677764
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=213.31 Aligned_cols=237 Identities=20% Similarity=0.282 Sum_probs=164.7
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc--
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI-- 100 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~-- 100 (273)
.+++.+.+++ +|.+++|...| ++++|||+||++++. ..|+.+.+.|+++|+|+++|+||||.|..+..
T Consensus 3 ~~~~~~~~~~-~~~~~~~~~~g--------~g~~~vllHG~~~~~-~~w~~~~~~l~~~~~vi~~Dl~G~G~s~~~~~~~ 72 (291)
T 3qyj_A 3 TNFEQTIVDT-TEARINLVKAG--------HGAPLLLLHGYPQTH-VMWHKIAPLLANNFTVVATDLRGYGDSSRPASVP 72 (291)
T ss_dssp TTCEEEEEEC-SSCEEEEEEEC--------CSSEEEEECCTTCCG-GGGTTTHHHHTTTSEEEEECCTTSTTSCCCCCCG
T ss_pred CCcceeEEec-CCeEEEEEEcC--------CCCeEEEECCCCCCH-HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCc
Confidence 4577888888 89999999875 467899999999998 99999999998889999999999999987654
Q ss_pred ---cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC--cchHHH---------
Q 024042 101 ---QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR--GDNEAL--------- 166 (273)
Q Consensus 101 ---~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~--~~~~~~--------- 166 (273)
.++.+..++++.++++.++.++++++||||||.+|+.+|.++|++++++|++++...... ......
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~ 152 (291)
T 3qyj_A 73 HHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFF 152 (291)
T ss_dssp GGGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHHHHHHTTHHHH
T ss_pred cccccCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhhhhHHHHHHHH
Confidence 268889999999999999999999999999999999999999999999999986432100 000000
Q ss_pred -----------hhhhh---hhh-hhhc---cCCCChHHHHHHhhhh------------hccCCCCC----hhhHHhhhhc
Q 024042 167 -----------VKRAN---LER-IDHL---MLPESASQLRTLTGLA------------VSKNLDIV----PDFFFNDFVH 212 (273)
Q Consensus 167 -----------~~~~~---~~~-~~~~---~~~~~~~~~~~~~~~~------------~~~~~~~~----~~~~~~~~~~ 212 (273)
..... ... +... ........+..+.... +....... ......++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 232 (291)
T 3qyj_A 153 LIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDELDMKQKISC 232 (291)
T ss_dssp TTCSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHHHHTTTTCCBCS
T ss_pred hccCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhhcchhcCCcccc
Confidence 00000 000 0000 0001111111111000 00000000 0001235667
Q ss_pred cEEEEecCCCCCCCh-HHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 213 DVLIVWGDQDQIFPL-KMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 213 p~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
|+|+++|++|.+.+. .....+.+.. ++.+...++ +||+++.|+|+++.+.|.+||++
T Consensus 233 P~Lvi~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~-~GH~~~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 233 PVLVLWGEKGIIGRKYDVLATWRERA-IDVSGQSLP-CGHFLPEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp CEEEEEETTSSHHHHSCHHHHHHTTB-SSEEEEEES-SSSCHHHHSHHHHHHHHHHHHHC
T ss_pred ceEEEecccccccchhhHHHHHHhhc-CCcceeecc-CCCCchhhCHHHHHHHHHHHHhc
Confidence 999999999976432 2334444444 788888887 99999999999999999999975
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=231.44 Aligned_cols=239 Identities=18% Similarity=0.307 Sum_probs=177.0
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc--
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-- 100 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-- 100 (273)
.++..++++.||.+++|...| ++|+||++||++++. ..|..+++.|.+. |+|+++|+||||.|..+..
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~g--------~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~ 306 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVELG--------SGPAVCLCHGFPESW-YSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIE 306 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEEC--------SSSEEEEECCTTCCG-GGGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGG
T ss_pred ccceeEEEeCCCcEEEEEEcC--------CCCEEEEEeCCCCch-hHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCcc
Confidence 346678888899999999985 568999999999998 8999999999886 9999999999999987654
Q ss_pred cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhh----------
Q 024042 101 QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA---------- 170 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~---------- 170 (273)
.++.++.++++.+++++++.++++++|||+||.+|+.++.++|++++++|+++++...............
T Consensus 307 ~~~~~~~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (555)
T 3i28_A 307 EYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLY 386 (555)
T ss_dssp GGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHH
T ss_pred cccHHHHHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHH
Confidence 5688999999999999999999999999999999999999999999999999887654322110000000
Q ss_pred --------------hhhhhhhccC------------------------------CCChHHHHHHhhhhhccCC-------
Q 024042 171 --------------NLERIDHLML------------------------------PESASQLRTLTGLAVSKNL------- 199 (273)
Q Consensus 171 --------------~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~------- 199 (273)
....+..... ...................
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (555)
T 3i28_A 387 FQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWY 466 (555)
T ss_dssp HHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTT
T ss_pred hhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHHH
Confidence 0000000000 0001111111110000000
Q ss_pred CC-------ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 200 DI-------VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 200 ~~-------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.. .......++..|+|+++|++|.++|.+..+.+.+.+ ++.++++++++||+.+.++|+++.+.|.+||++.
T Consensus 467 ~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 545 (555)
T 3i28_A 467 RNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSD 545 (555)
T ss_dssp SCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHHH
T ss_pred HhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhC-CCceEEEeCCCCCCcchhCHHHHHHHHHHHHHhc
Confidence 00 000112255569999999999999999999999888 8999999999999999999999999999999864
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=197.38 Aligned_cols=197 Identities=26% Similarity=0.457 Sum_probs=167.5
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH--HHHhhcCC-CeEEeecCCCCCCC---CC
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK--QVQFFAPH-FNVYVPDLIFFGHS---TT 97 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~--~~~~l~~~-~~v~~~d~~g~g~s---~~ 97 (273)
.++...++. +|.+++++.+.+ .+++|+||++||++++. ..|.. +.+.|.+. |.|+++|+||+|.| ..
T Consensus 3 ~~~~~~~~~-~g~~l~~~~~~~-----~~~~~~vv~~hG~~~~~-~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~ 75 (207)
T 3bdi_A 3 ALQEEFIDV-NGTRVFQRKMVT-----DSNRRSIALFHGYSFTS-MDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEK 75 (207)
T ss_dssp CCEEEEEEE-TTEEEEEEEECC-----TTCCEEEEEECCTTCCG-GGGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTT
T ss_pred cceeEEEee-CCcEEEEEEEec-----cCCCCeEEEECCCCCCc-cccchHHHHHHHHhCCCeEEEEcCCcccccCcccC
Confidence 356677777 888999554431 23678999999999998 88988 99999887 99999999999999 76
Q ss_pred CCccc-cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhh
Q 024042 98 RSIQR-TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERID 176 (273)
Q Consensus 98 ~~~~~-~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (273)
+...+ +.++.++++..+++.++.++++++|||+||.+++.++.++|++++++++++|......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~---------------- 139 (207)
T 3bdi_A 76 YGIDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVESL---------------- 139 (207)
T ss_dssp TCCTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGGG----------------
T ss_pred CCCCcchHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccch----------------
Confidence 66666 8999999999999999989999999999999999999999999999999998632110
Q ss_pred hccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcC
Q 024042 177 HLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE 256 (273)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 256 (273)
.....++..|+++++|++|..++.+..+.+.+.+ ++.++++++++||..+.+
T Consensus 140 ---------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~ 191 (207)
T 3bdi_A 140 ---------------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASII-SGSRLEIVEGSGHPVYIE 191 (207)
T ss_dssp ---------------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHS-TTCEEEEETTCCSCHHHH
T ss_pred ---------------------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhc-CCceEEEeCCCCCCcccc
Confidence 1122334459999999999999999999999999 899999999999999888
Q ss_pred ChhhHHHHHHHHhcc
Q 024042 257 NPGLFNSIVKNFLRG 271 (273)
Q Consensus 257 ~~~~~~~~i~~fl~~ 271 (273)
+++++.+.|.+||++
T Consensus 192 ~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 192 KPEEFVRITVDFLRN 206 (207)
T ss_dssp SHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhh
Confidence 999999999999975
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-34 Score=215.48 Aligned_cols=218 Identities=17% Similarity=0.272 Sum_probs=161.8
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC----ccccHHHHHHHHHHHHHHhCCccEEEEEe
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS----IQRTELFQAASLGKLLEKIGVERFSVVGT 128 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~l~G~ 128 (273)
++|+|||+||++++. ..|..+++.|+++|+|+++|+||+|.|.... ...+.++.++++.++++.++.++++++||
T Consensus 27 ~~~~vv~lHG~~~~~-~~~~~~~~~l~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~ 105 (282)
T 3qvm_A 27 GEKTVLLAHGFGCDQ-NMWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGH 105 (282)
T ss_dssp SSCEEEEECCTTCCG-GGGTTTHHHHHTTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCeEEEECCCCCCc-chHHHHHHHHhcCceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHcCCCceEEEEe
Confidence 448999999999998 8999999999889999999999999998765 23488999999999999999999999999
Q ss_pred ccchHHHHHHHHhCCcccceEEEecCCCCCCCcc--------hHHH---hhhhhh------hhh-hhcc-CCCChHHHHH
Q 024042 129 SYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD--------NEAL---VKRANL------ERI-DHLM-LPESASQLRT 189 (273)
Q Consensus 129 S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~--------~~~~---~~~~~~------~~~-~~~~-~~~~~~~~~~ 189 (273)
|+||.+|+.++.++|++++++|++++........ .... ...... ... .... ..........
T Consensus 106 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (282)
T 3qvm_A 106 SVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASHSSELIGE 185 (282)
T ss_dssp THHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred cccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCccchhhHHH
Confidence 9999999999999999999999999876543221 0000 000000 000 0000 0111111111
Q ss_pred Hhhhhhcc-----------CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCCh
Q 024042 190 LTGLAVSK-----------NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP 258 (273)
Q Consensus 190 ~~~~~~~~-----------~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 258 (273)
........ ...........++..|+++++|++|.++|.+..+.+.+.+ ++.++++++++||+.+.++|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~ 264 (282)
T 3qvm_A 186 LSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENI-PNSQLELIQAEGHCLHMTDA 264 (282)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHS-SSEEEEEEEEESSCHHHHCH
T ss_pred HHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhC-CCCcEEEecCCCCcccccCH
Confidence 11100000 0011122334566779999999999999999999999999 89999999999999999999
Q ss_pred hhHHHHHHHHhccc
Q 024042 259 GLFNSIVKNFLRGS 272 (273)
Q Consensus 259 ~~~~~~i~~fl~~~ 272 (273)
+++.+.|.+||+++
T Consensus 265 ~~~~~~i~~fl~~~ 278 (282)
T 3qvm_A 265 GLITPLLIHFIQNN 278 (282)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999864
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-33 Score=205.80 Aligned_cols=219 Identities=17% Similarity=0.178 Sum_probs=163.9
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHH
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKL 114 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~ 114 (273)
|.+++|...++ .+++|+||++||++++. ..|. .+..|.++|+|+++|+||+|.|. ....++.++.++++.++
T Consensus 2 g~~l~y~~~g~-----~~~~~~vv~~hG~~~~~-~~~~-~~~~l~~g~~v~~~d~~g~g~s~-~~~~~~~~~~~~~~~~~ 73 (245)
T 3e0x_A 2 NAMLHYVHVGN-----KKSPNTLLFVHGSGCNL-KIFG-ELEKYLEDYNCILLDLKGHGESK-GQCPSTVYGYIDNVANF 73 (245)
T ss_dssp CCCCCEEEEEC-----TTCSCEEEEECCTTCCG-GGGT-TGGGGCTTSEEEEECCTTSTTCC-SCCCSSHHHHHHHHHHH
T ss_pred CceeEEEecCC-----CCCCCEEEEEeCCcccH-HHHH-HHHHHHhCCEEEEecCCCCCCCC-CCCCcCHHHHHHHHHHH
Confidence 56788888761 34678999999999998 8888 88888877999999999999998 44567899999999999
Q ss_pred H------HHhCCccEEEEEeccchHHHHHHHHh-CCcccceEEEecCCCCCCCcchHHHhhhhhh---hhhhh-ccCC--
Q 024042 115 L------EKIGVERFSVVGTSYGGFVAYHMARM-WPERVEKVVIASSGVNMKRGDNEALVKRANL---ERIDH-LMLP-- 181 (273)
Q Consensus 115 ~------~~~~~~~i~l~G~S~Gg~~a~~~a~~-~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~-- 181 (273)
+ +.++ +++++|||+||.+|+.++.+ +|+ ++++|++++.................. ..... ....
T Consensus 74 ~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (245)
T 3e0x_A 74 ITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGID 150 (245)
T ss_dssp HHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSC
T ss_pred HHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccc
Confidence 9 7777 99999999999999999999 999 999999999877633322111111000 00000 0000
Q ss_pred ------------CChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCC
Q 024042 182 ------------ESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENT 249 (273)
Q Consensus 182 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (273)
.............. .........++..|+++++|++|.++|.+..+.+.+.+ +++++++++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~ 225 (245)
T 3e0x_A 151 NPLSEKYFETLEKDPDIMINDLIACK----LIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEV-ENSELKIFETG 225 (245)
T ss_dssp SHHHHHHHTTSCSSHHHHHHHHHHHH----HCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS-SSEEEEEESSC
T ss_pred hHHHHHHHHHHhcCcHHHHHHHHHhc----cccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHc-CCceEEEeCCC
Confidence 01111111111110 11122334566779999999999999999999999999 89999999999
Q ss_pred CCCcCcCChhhHHHHHHHHh
Q 024042 250 SHVPQIENPGLFNSIVKNFL 269 (273)
Q Consensus 250 gH~~~~~~~~~~~~~i~~fl 269 (273)
||+.+.++|+++.+.|.+||
T Consensus 226 gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 226 KHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp GGGHHHHTHHHHHHHHHTTC
T ss_pred CcceEEecHHHHHHHHHhhC
Confidence 99999999999999999886
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=209.14 Aligned_cols=229 Identities=14% Similarity=0.190 Sum_probs=151.7
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCC-CCCCCCCccc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFF-GHSTTRSIQR 102 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-g~s~~~~~~~ 102 (273)
.+...+++.+|.+++|+..+++.. ..+++|+||++||++++. ..|..+++.|++. |+|+++|+||| |.|..+...+
T Consensus 7 ~~~~~i~~~dG~~l~~~~~~p~~~-~~~~~~~VvllHG~g~~~-~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~~~ 84 (305)
T 1tht_A 7 TIAHVLRVNNGQELHVWETPPKEN-VPFKNNTILIASGFARRM-DHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEF 84 (305)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCGGG-GGGHHHHHHHHTTTCCEEEECCCBCC--------CC
T ss_pred ceEEEEEcCCCCEEEEEEecCccc-CCCCCCEEEEecCCccCc-hHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCcccce
Confidence 345577777999999988763210 123568999999999998 8999999999875 99999999999 9998766667
Q ss_pred cHHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhh---h
Q 024042 103 TELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERI---D 176 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~ 176 (273)
+.+..++|+.++++.+ +.++++++||||||.+|+.+|.+ | +++++|++++..... ............ .
T Consensus 85 ~~~~~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~----~~~~~~~~~~~~~~~~ 158 (305)
T 1tht_A 85 TMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLR----DTLEKALGFDYLSLPI 158 (305)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHH----HHHHHHHSSCGGGSCG
T ss_pred ehHHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHH----HHHHHHhhhhhhhcch
Confidence 8888888887777765 77899999999999999999998 6 899999987654321 111000000000 0
Q ss_pred hccCC-----CChHHHHHHhhhhhccCCCC--ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCC
Q 024042 177 HLMLP-----ESASQLRTLTGLAVSKNLDI--VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIEN 248 (273)
Q Consensus 177 ~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~ 248 (273)
..... ........+........... .....+.++..|+|+++|++|.++|++.++.+++.++ ++++++++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~ 238 (305)
T 1tht_A 159 DELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLG 238 (305)
T ss_dssp GGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETT
T ss_pred hhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCCCCcEEEEeCC
Confidence 00000 00000001110000000000 1123456677899999999999999999999988773 5789999999
Q ss_pred CCCCcCcCChhhHH
Q 024042 249 TSHVPQIENPGLFN 262 (273)
Q Consensus 249 ~gH~~~~~~~~~~~ 262 (273)
+||.++ ++|+.+.
T Consensus 239 agH~~~-e~p~~~~ 251 (305)
T 1tht_A 239 SSHDLG-ENLVVLR 251 (305)
T ss_dssp CCSCTT-SSHHHHH
T ss_pred CCCchh-hCchHHH
Confidence 999986 8887443
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-33 Score=217.60 Aligned_cols=240 Identities=22% Similarity=0.254 Sum_probs=171.1
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc--cc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI--QR 102 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~--~~ 102 (273)
+.+.+++ +|.+++|+..++ .+.++|+||++||++++. ..|..+++.|.+. |+|+++|+||+|.|..+.. .+
T Consensus 4 ~~~~~~~-~g~~l~y~~~G~----~~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~ 77 (356)
T 2e3j_A 4 VHRILNC-RGTRIHAVADSP----PDQQGPLVVLLHGFPESW-YSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAY 77 (356)
T ss_dssp CEEEEEE-TTEEEEEEEECC----TTCCSCEEEEECCTTCCG-GGGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGG
T ss_pred eEEEEcc-CCeEEEEEEecC----CCCCCCEEEEECCCCCcH-HHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCccccc
Confidence 4456666 899999999872 223678999999999998 8899999999775 9999999999999987653 46
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCC----------CCCC-cch-HHHhhh-
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV----------NMKR-GDN-EALVKR- 169 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~----------~~~~-~~~-~~~~~~- 169 (273)
+..+.++++.++++.++.++++++|||+||.+|+.++.++|++++++|+++++. .... ... ..+...
T Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (356)
T 2e3j_A 78 RIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHLELA 157 (356)
T ss_dssp SHHHHHHHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCGGGSSCCSSCSSCCSCHHHHHHSSS
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcccccccccCCCCCcccccchHHHHHhh
Confidence 889999999999999999999999999999999999999999999999998765 1110 000 000000
Q ss_pred ----------hh------------h-hhhhhccC----------------------------------------------
Q 024042 170 ----------AN------------L-ERIDHLML---------------------------------------------- 180 (273)
Q Consensus 170 ----------~~------------~-~~~~~~~~---------------------------------------------- 180 (273)
.. . ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (356)
T 2e3j_A 158 GPGRVWYQDYFAVQDGIITEIEEDLRGWLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCMAEGARLKDA 237 (356)
T ss_dssp CSSEEEHHHHHHHCSHHHHHHHTTHHHHHHHHHHHTSHHHHHHHHHCCC-------CCCGGGTSTTSTTEEETTSCGGGG
T ss_pred cCCcHHHHHHHhcccchHHHHHHhHHHHHHHHhhccccchhhccchhhcccccccccccccccccccccccccchhhhhc
Confidence 00 0 00000000
Q ss_pred -------C--CChHHHHHHhhhhhc----------cCC----CCChhhHHhhhhccEEEEecCCCCCCCh--HHHHHHHH
Q 024042 181 -------P--ESASQLRTLTGLAVS----------KNL----DIVPDFFFNDFVHDVLIVWGDQDQIFPL--KMATELKE 235 (273)
Q Consensus 181 -------~--~~~~~~~~~~~~~~~----------~~~----~~~~~~~~~~~~~p~l~i~g~~D~~~~~--~~~~~~~~ 235 (273)
+ ........+...... ... ..........+.+|+|+++|++|.++|. +..+.+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~p~~~~~~~~l~~ 317 (356)
T 2e3j_A 238 FVYPETMPAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQYDVGTIWGAQAIERAHE 317 (356)
T ss_dssp CCCCSSCCTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTSCCCSCEEEEEETTCHHHHHTHHHHHTHHH
T ss_pred ccccccccccCCHHHHHHHHHHhcccCCchhHHHHHhcccChhhhHhhcCCccCCCEEEEecCCCccccccHHHHHHHHH
Confidence 0 000001000000000 000 0000001245667999999999999984 88889999
Q ss_pred HhcCCc-EEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 236 LLGKKA-RLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 236 ~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.+ ++. ++++++++||+++.|+|+++.+.|.+||++.
T Consensus 318 ~~-p~~~~~~~i~~aGH~~~~e~p~~~~~~i~~fl~~~ 354 (356)
T 2e3j_A 318 VM-PNYRGTHMIADVGHWIQQEAPEETNRLLLDFLGGL 354 (356)
T ss_dssp HC-TTEEEEEEESSCCSCHHHHSHHHHHHHHHHHHHTS
T ss_pred hC-cCcceEEEecCcCcccchhCHHHHHHHHHHHHhhc
Confidence 88 898 9999999999999999999999999999763
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=209.71 Aligned_cols=239 Identities=19% Similarity=0.155 Sum_probs=160.9
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhc-CCCeEEeecCCCCCCCCCCC--c
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFA-PHFNVYVPDLIFFGHSTTRS--I 100 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~s~~~~--~ 100 (273)
.++..++++.+|.+++|...| .+++++|||+||++++. .. ......+. ++|+|+++|+||||.|.... .
T Consensus 13 ~~~~~~~~~~~g~~l~~~~~g------~~~g~~vvllHG~~~~~-~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~ 84 (317)
T 1wm1_A 13 AYDSGWLDTGDGHRIYWELSG------NPNGKPAVFIHGGPGGG-IS-PHHRQLFDPERYKVLLFDQRGCGRSRPHASLD 84 (317)
T ss_dssp CSEEEEEECSSSCEEEEEEEE------CTTSEEEEEECCTTTCC-CC-GGGGGGSCTTTEEEEEECCTTSTTCBSTTCCT
T ss_pred cceeeEEEcCCCcEEEEEEcC------CCCCCcEEEECCCCCcc-cc-hhhhhhccccCCeEEEECCCCCCCCCCCcccc
Confidence 445678888889999998876 33457899999987654 21 12233443 35999999999999997543 2
Q ss_pred cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc------------chH---H
Q 024042 101 QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG------------DNE---A 165 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~------------~~~---~ 165 (273)
.++..++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++....... ... .
T Consensus 85 ~~~~~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 1wm1_A 85 NNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWER 164 (317)
T ss_dssp TCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHH
T ss_pred cccHHHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHHH
Confidence 4688899999999999999999999999999999999999999999999999875422100 000 0
Q ss_pred Hhhhhh-------hhhhhhccCCCChHH-------------------------------H----HHHhhhhhc-cC--CC
Q 024042 166 LVKRAN-------LERIDHLMLPESASQ-------------------------------L----RTLTGLAVS-KN--LD 200 (273)
Q Consensus 166 ~~~~~~-------~~~~~~~~~~~~~~~-------------------------------~----~~~~~~~~~-~~--~~ 200 (273)
+..... ...+........... . .......+. .. ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (317)
T 1wm1_A 165 VLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLES 244 (317)
T ss_dssp HHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSS
T ss_pred HHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhccccccc
Confidence 000000 000000000000000 0 000000000 00 00
Q ss_pred CC-hhhHHhhhh-ccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcC-ChhhHHHHHHHHhcc
Q 024042 201 IV-PDFFFNDFV-HDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE-NPGLFNSIVKNFLRG 271 (273)
Q Consensus 201 ~~-~~~~~~~~~-~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 271 (273)
.. ......++. .|+|+++|++|.++|.+.++.+.+.+ +++++++++++||+++.+ .++++.+.|.+|+.+
T Consensus 245 ~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~-p~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~~~ 317 (317)
T 1wm1_A 245 DDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW-PEAELHIVEGAGHSYDEPGILHQLMIATDRFAGK 317 (317)
T ss_dssp TTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHC-TTSEEEEETTCCSSTTSHHHHHHHHHHHHHHTC-
T ss_pred chhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhC-CCceEEEECCCCCCCCCcchHHHHHHHHHHHhcC
Confidence 00 112234554 89999999999999999999999999 899999999999998654 578899999999864
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-33 Score=224.00 Aligned_cols=233 Identities=18% Similarity=0.174 Sum_probs=170.5
Q ss_pred EecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhc-CCCeEEeecCCCCCCCCCCCccccHHHHH
Q 024042 30 IDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFA-PHFNVYVPDLIFFGHSTTRSIQRTELFQA 108 (273)
Q Consensus 30 ~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~s~~~~~~~~~~~~~ 108 (273)
....+|.+++|...+ ++|+|||+||++++. ..|..+++.|. ++|+|+++|+||+|.|..+...++.++.+
T Consensus 8 ~~~~dG~~l~y~~~G--------~gp~VV~lHG~~~~~-~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~~~s~~~~a 78 (456)
T 3vdx_A 8 QENSTSIDLYYEDHG--------TGVPVVLIHGFPLSG-HSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFA 78 (456)
T ss_dssp EETTEEEEEEEEEES--------SSEEEEEECCTTCCG-GGGTTHHHHHHHHTEEEEEECCTTSTTSCCCSSCCSHHHHH
T ss_pred ccccCCeEEEEEEeC--------CCCEEEEECCCCCcH-HHHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCHHHHH
Confidence 334489999999875 568999999999998 88999999984 45999999999999999887788999999
Q ss_pred HHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC-CcccceEEEecCCCCCCCcc--------hHHHhhhh----h----
Q 024042 109 ASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKRGD--------NEALVKRA----N---- 171 (273)
Q Consensus 109 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~~~v~~~v~~~~~~~~~~~~--------~~~~~~~~----~---- 171 (273)
+++.++++.++.++++++|||+||.+++.++..+ |++++++|++++........ ........ .
T Consensus 79 ~dl~~~l~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (456)
T 3vdx_A 79 ADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRY 158 (456)
T ss_dssp HHHHHHHHHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999988887 89999999999876432110 00000000 0
Q ss_pred --hh-hhhhcc-------CCCChHHHHHHhhhhhccC----------CCCChhhHHhhhhccEEEEecCCCCCCChH-HH
Q 024042 172 --LE-RIDHLM-------LPESASQLRTLTGLAVSKN----------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLK-MA 230 (273)
Q Consensus 172 --~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~-~~ 230 (273)
.. ...... ................... ........+.++..|+|+++|++|.++|.+ ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~PvLiI~G~~D~~vp~~~~~ 238 (456)
T 3vdx_A 159 AFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTA 238 (456)
T ss_dssp HHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTCCSCCEEEEETTCSSSCGGGTH
T ss_pred HHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhCCCCEEEEEeCCCCCcCHHHHH
Confidence 00 000000 0111111111111110000 000111223456679999999999999998 67
Q ss_pred HHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 231 TELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+.+.+.+ +++++++++++||+++.++|+++.+.|.+||++.
T Consensus 239 ~~l~~~~-~~~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~~ 279 (456)
T 3vdx_A 239 RVFHKAL-PSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAKA 279 (456)
T ss_dssp HHHHHHC-TTSEEEEETTCCSCTTTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHC-CCceEEEeCCCCCcchhhCHHHHHHHHHHHHHHh
Confidence 7777777 8999999999999999999999999999999863
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-32 Score=203.99 Aligned_cols=238 Identities=15% Similarity=0.113 Sum_probs=166.3
Q ss_pred CceeEEec---CCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHh--HHHHHHhhcC-CCeEEeecCCCCCCCCCC
Q 024042 25 LSSQTIDI---DDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQ--WRKQVQFFAP-HFNVYVPDLIFFGHSTTR 98 (273)
Q Consensus 25 ~~~~~~~~---~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~--~~~~~~~l~~-~~~v~~~d~~g~g~s~~~ 98 (273)
.+.+.+++ .+|.+++|+... ..++++|+||++||++++. .. +..+...+.+ +|.|+++|+||+|.|...
T Consensus 9 ~~~~~~~~~~~~~g~~l~~~~~~----~~~~~~~~vv~~HG~~~~~-~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 83 (270)
T 3llc_A 9 IETHAITVGQGSDARSIAALVRA----PAQDERPTCIWLGGYRSDM-TGTKALEMDDLAASLGVGAIRFDYSGHGASGGA 83 (270)
T ss_dssp EEEEEEEESSGGGCEEEEEEEEC----CSSTTSCEEEEECCTTCCT-TSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSC
T ss_pred CCcceEEEeeccCcceEEEEecc----CCCCCCCeEEEECCCcccc-ccchHHHHHHHHHhCCCcEEEeccccCCCCCCc
Confidence 34455555 699999998654 2223489999999998885 44 3446777754 599999999999999987
Q ss_pred CccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHh---CC---cccceEEEecCCCCCCCcc-----hHHHh
Q 024042 99 SIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARM---WP---ERVEKVVIASSGVNMKRGD-----NEALV 167 (273)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---~~---~~v~~~v~~~~~~~~~~~~-----~~~~~ 167 (273)
....+.++.++++.++++.++.++++++|||+||.+|+.++.+ +| ++++++|++++........ .....
T Consensus 84 ~~~~~~~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~~~~~~~~~~ 163 (270)
T 3llc_A 84 FRDGTISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRER 163 (270)
T ss_dssp GGGCCHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTTGGGCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhhhhhhhhhhh
Confidence 7778999999999999999999999999999999999999999 99 8999999999876532210 00000
Q ss_pred hhhhhhhhh---hccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC--cE
Q 024042 168 KRANLERID---HLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK--AR 242 (273)
Q Consensus 168 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~ 242 (273)
......... ..................... .......++..|+++++|++|.++|.+..+.+.+.+ ++ .+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~-~~~~~~ 238 (270)
T 3llc_A 164 AELAENGYFEEVSEYSPEPNIFTRALMEDGRAN----RVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHL-PADDVV 238 (270)
T ss_dssp HHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHT----CCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTS-CSSSEE
T ss_pred hhhhccCcccChhhcccchhHHHHHHHhhhhhh----hhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhc-CCCCee
Confidence 000000000 000000000000000000000 001122345569999999999999999999999998 65 99
Q ss_pred EEEeCCCCCCcC-cCChhhHHHHHHHHhccc
Q 024042 243 LEIIENTSHVPQ-IENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 243 ~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 272 (273)
+++++++||+.. .+.++++.+.|.+||+++
T Consensus 239 ~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 269 (270)
T 3llc_A 239 LTLVRDGDHRLSRPQDIDRMRNAIRAMIEPR 269 (270)
T ss_dssp EEEETTCCSSCCSHHHHHHHHHHHHHHHC--
T ss_pred EEEeCCCcccccccccHHHHHHHHHHHhcCC
Confidence 999999999654 467889999999999864
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=216.54 Aligned_cols=245 Identities=17% Similarity=0.205 Sum_probs=166.3
Q ss_pred CceeEEecCCcc----eEEeecCCccCCCCCCCCCeEEEEcCCCCchhHh-------------HHHHH---HhhcC-CCe
Q 024042 25 LSSQTIDIDDET----TLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQ-------------WRKQV---QFFAP-HFN 83 (273)
Q Consensus 25 ~~~~~~~~~~g~----~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~-------------~~~~~---~~l~~-~~~ 83 (273)
++...+++++|. +|+|..++.. ...+.|+||++||++++. .. |+.++ ..|.. +|+
T Consensus 12 ~~~~~~~~~~g~~l~~~i~y~~~g~~---~~~~~p~vll~HG~~~~~-~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~ 87 (377)
T 3i1i_A 12 FILKEYTFENGRTIPVQMGYETYGTL---NRERSNVILICHYFSATS-HAAGKYTAHDEESGWWDGLIGPGKAIDTNQYF 87 (377)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEESCC---CTTCCCEEEEECCTTCCS-CCSSCSSTTCSSCCTTTTTEETTSSEETTTCE
T ss_pred EeecceeecCCCEeeeeEEEEeeccc---CCCCCCEEEEeccccCcc-hhccccccccccccchhhhcCCCCccccccEE
Confidence 355667777764 4588888721 123468999999999987 55 77777 55554 499
Q ss_pred EEeecCCCCCCCC-------CCC--------------ccccHHHHHHHHHHHHHHhCCccEE-EEEeccchHHHHHHHHh
Q 024042 84 VYVPDLIFFGHST-------TRS--------------IQRTELFQAASLGKLLEKIGVERFS-VVGTSYGGFVAYHMARM 141 (273)
Q Consensus 84 v~~~d~~g~g~s~-------~~~--------------~~~~~~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~ 141 (273)
|+++|+||||.|. .+. ..++.+++++++.+++++++.++++ |+||||||.+|+.+|.+
T Consensus 88 vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~ 167 (377)
T 3i1i_A 88 VICTDNLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVH 167 (377)
T ss_dssp EEEECCTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHH
T ss_pred EEEecccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHH
Confidence 9999999997743 111 1458899999999999999999986 99999999999999999
Q ss_pred CCcccceEEE-ecCCCCCCCcch-------HHH-------------------hhhh---------hhhhhhhccCC----
Q 024042 142 WPERVEKVVI-ASSGVNMKRGDN-------EAL-------------------VKRA---------NLERIDHLMLP---- 181 (273)
Q Consensus 142 ~~~~v~~~v~-~~~~~~~~~~~~-------~~~-------------------~~~~---------~~~~~~~~~~~---- 181 (273)
+|++++++|+ +++......... ..+ .... ....+...+..
T Consensus 168 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (377)
T 3i1i_A 168 YPHMVERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIE 247 (377)
T ss_dssp CTTTBSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSC
T ss_pred ChHHHHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhcc
Confidence 9999999999 766544111000 000 0000 00000000000
Q ss_pred CC-------hHHHHHHhhhhh---c-----------------cCC---CCChhhHHhhhhccEEEEecCCCCCCChHHHH
Q 024042 182 ES-------ASQLRTLTGLAV---S-----------------KNL---DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMAT 231 (273)
Q Consensus 182 ~~-------~~~~~~~~~~~~---~-----------------~~~---~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~ 231 (273)
.. ............ . ... .......+.++.+|+|+++|++|.++|.+..+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~ 327 (377)
T 3i1i_A 248 VEPYEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNY 327 (377)
T ss_dssp CGGGTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHH
T ss_pred ccccccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHH
Confidence 00 000111000000 0 000 01113345677789999999999999999999
Q ss_pred HHHHHhc---CCcEEEEeCC-CCCCcCcCChhhHHHHHHHHhcccC
Q 024042 232 ELKELLG---KKARLEIIEN-TSHVPQIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 232 ~~~~~~~---~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~l 273 (273)
.+.+.+. ++++++++++ +||+.+.++|+++.+.|.+||++++
T Consensus 328 ~~~~~~~~~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 328 KMVDLLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRKV 373 (377)
T ss_dssp HHHHHHHHTTCCEEECCBCCTTGGGHHHHCGGGTHHHHHHHHHSCC
T ss_pred HHHHHHHhcCCCceEEEcCCCCCCcchhcCHHHHHHHHHHHHHhhh
Confidence 9988872 7899999998 9999999999999999999998764
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=204.82 Aligned_cols=211 Identities=18% Similarity=0.236 Sum_probs=142.5
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhc-CCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCcc--EEEEEec
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFA-PHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVER--FSVVGTS 129 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~l~G~S 129 (273)
.+|+|||+||++++. ..|..+++.|+ ++|+|+++|+||||.|.... ..+.+++++++.++++.++.++ ++|+|||
T Consensus 15 ~~~~vvllHG~~~~~-~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~-~~~~~~~a~~l~~~l~~l~~~~~p~~lvGhS 92 (264)
T 1r3d_A 15 RTPLVVLVHGLLGSG-ADWQPVLSHLARTQCAALTLDLPGHGTNPERH-CDNFAEAVEMIEQTVQAHVTSEVPVILVGYS 92 (264)
T ss_dssp TBCEEEEECCTTCCG-GGGHHHHHHHTTSSCEEEEECCTTCSSCC--------CHHHHHHHHHHHTTCCTTSEEEEEEET
T ss_pred CCCcEEEEcCCCCCH-HHHHHHHHHhcccCceEEEecCCCCCCCCCCC-ccCHHHHHHHHHHHHHHhCcCCCceEEEEEC
Confidence 358999999999999 99999999998 56999999999999998643 3578889999999999998876 9999999
Q ss_pred cchHHHHH---HHHhCCcccceEEEecCCCCCCCcchHH--------Hhhhhh---hhh-hhh-----ccCCCChHHHHH
Q 024042 130 YGGFVAYH---MARMWPERVEKVVIASSGVNMKRGDNEA--------LVKRAN---LER-IDH-----LMLPESASQLRT 189 (273)
Q Consensus 130 ~Gg~~a~~---~a~~~~~~v~~~v~~~~~~~~~~~~~~~--------~~~~~~---~~~-~~~-----~~~~~~~~~~~~ 189 (273)
|||.+|+. +|.++|++++++|++++........... ...... ... ... ............
T Consensus 93 mGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T 1r3d_A 93 LGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQT 172 (264)
T ss_dssp HHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSGGGTTCCHHHHHH
T ss_pred HhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhhhhhhhccCHHHHHH
Confidence 99999999 8888999999999998754432211000 000000 000 000 001111111111
Q ss_pred Hhhh-----------hhcc---CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc
Q 024042 190 LTGL-----------AVSK---NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255 (273)
Q Consensus 190 ~~~~-----------~~~~---~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 255 (273)
.... .... .........+.++..|+++++|++|..+ ..+.+.. . .++++++++||+++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~-----~~~~~~~-~-~~~~~i~~~gH~~~~ 245 (264)
T 1r3d_A 173 LIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAESS-G-LSYSQVAQAGHNVHH 245 (264)
T ss_dssp HHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH-----HHHHHHH-C-SEEEEETTCCSCHHH
T ss_pred HHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchH-----HHHHHHh-C-CcEEEcCCCCCchhh
Confidence 1000 0000 0001122345667789999999999753 2344445 3 789999999999999
Q ss_pred CChhhHHHHHHHHhccc
Q 024042 256 ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 256 ~~~~~~~~~i~~fl~~~ 272 (273)
|+|+++.+.|.+|+++.
T Consensus 246 e~p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 246 EQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp HCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHh
Confidence 99999999999999764
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-32 Score=206.94 Aligned_cols=237 Identities=19% Similarity=0.234 Sum_probs=155.2
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhc-CCCeEEeecCCCCCCCCCCC--
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFA-PHFNVYVPDLIFFGHSTTRS-- 99 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~s~~~~-- 99 (273)
..++..++++.+|.+++|...| ++++++|||+||++++. .. ......+. ++|+|+++|+||||.|....
T Consensus 9 ~~~~~~~~~~~~g~~l~y~~~G------~~~g~pvvllHG~~~~~-~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 80 (313)
T 1azw_A 9 TPYQQGSLKVDDRHTLYFEQCG------NPHGKPVVMLHGGPGGG-CN-DKMRRFHDPAKYRIVLFDQRGSGRSTPHADL 80 (313)
T ss_dssp CCSEEEEEECSSSCEEEEEEEE------CTTSEEEEEECSTTTTC-CC-GGGGGGSCTTTEEEEEECCTTSTTSBSTTCC
T ss_pred CccccceEEcCCCCEEEEEecC------CCCCCeEEEECCCCCcc-cc-HHHHHhcCcCcceEEEECCCCCcCCCCCccc
Confidence 3456778888889999998876 33457899999987654 21 22334444 35999999999999998653
Q ss_pred ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc------------hH---
Q 024042 100 IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD------------NE--- 164 (273)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~------------~~--- 164 (273)
..++.+++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++........ ..
T Consensus 81 ~~~~~~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (313)
T 1azw_A 81 VDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWE 160 (313)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccccCchhhhHHHHhhhhhhhchHHHH
Confidence 246888999999999999999999999999999999999999999999999998754321000 00
Q ss_pred HHhhhhh-------hhhhhhccCCCChHH--------------------------------HH----HHhhhhhccC--C
Q 024042 165 ALVKRAN-------LERIDHLMLPESASQ--------------------------------LR----TLTGLAVSKN--L 199 (273)
Q Consensus 165 ~~~~~~~-------~~~~~~~~~~~~~~~--------------------------------~~----~~~~~~~~~~--~ 199 (273)
.+..... ...+........... .. ......+... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
T 1azw_A 161 HYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFF 240 (313)
T ss_dssp HHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGC
T ss_pred HHhhccCchhhhhhhhhhhhhccccCcchhhhhhhHHhhhhccccccccccccchhccccchhhHHHHhhhhhhcccccc
Confidence 0000000 000000000000000 00 0000000000 0
Q ss_pred --CCChhhHHhhhh-ccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcC-ChhhHHHHHHHH
Q 024042 200 --DIVPDFFFNDFV-HDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE-NPGLFNSIVKNF 268 (273)
Q Consensus 200 --~~~~~~~~~~~~-~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~f 268 (273)
.........++. .|+|+++|++|.++|.+.++.+.+.+ +++++++++++||+++.+ .++++.+.+.+|
T Consensus 241 ~~~~~~~~~~~~i~~~P~Lii~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f 312 (313)
T 1azw_A 241 EVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW-PKAQLQISPASGHSAFEPENVDALVRATDGF 312 (313)
T ss_dssp SSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHC-TTSEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred cccchhhhhcccccCCCEEEEecCCCCcCCHHHHHHHHhhC-CCcEEEEeCCCCCCcCCCccHHHHHHHHhhc
Confidence 000111233454 79999999999999999999999999 899999999999987432 234555555555
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-33 Score=220.23 Aligned_cols=242 Identities=18% Similarity=0.216 Sum_probs=171.5
Q ss_pred eEEecCCcceEEeecCCccC---CCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC-----CC---eEEeecCCCCCCCC
Q 024042 28 QTIDIDDETTLHFWGPKLED---DHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP-----HF---NVYVPDLIFFGHST 96 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~---~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~-----~~---~v~~~d~~g~g~s~ 96 (273)
.++...||.+++|+.+++++ ....+++|+|||+||++++. ..|..+++.|.+ +| +|+++|+||+|.|.
T Consensus 23 ~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~-~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~ 101 (398)
T 2y6u_A 23 STLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSK-VVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSA 101 (398)
T ss_dssp SBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCG-GGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHH
T ss_pred ccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcH-HHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCC
Confidence 34555699999999887432 01123457999999999999 899999999983 36 99999999999987
Q ss_pred CCC-----ccccHHHHHHHHHHHHHHhC----Ccc--EEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC-----
Q 024042 97 TRS-----IQRTELFQAASLGKLLEKIG----VER--FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR----- 160 (273)
Q Consensus 97 ~~~-----~~~~~~~~~~~~~~~~~~~~----~~~--i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~----- 160 (273)
.+. ..++..+.++++.++++.+. ..+ ++++||||||.+|+.+|.++|++|+++|++++......
T Consensus 102 ~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 181 (398)
T 2y6u_A 102 VRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAG 181 (398)
T ss_dssp HHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCSCC
T ss_pred CCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEeccccccccccccc
Confidence 542 34688899999999999754 344 99999999999999999999999999999998765421
Q ss_pred ---c------chHHHhhhhhh---------h----hhh--hccCCCChHHHHHHhhhhhcc-------------------
Q 024042 161 ---G------DNEALVKRANL---------E----RID--HLMLPESASQLRTLTGLAVSK------------------- 197 (273)
Q Consensus 161 ---~------~~~~~~~~~~~---------~----~~~--~~~~~~~~~~~~~~~~~~~~~------------------- 197 (273)
. ........... . .+. .............+.......
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (398)
T 2y6u_A 182 RPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQ 261 (398)
T ss_dssp CTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESSCHHH
T ss_pred cccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecCCchh
Confidence 0 00111100000 0 000 001111222222221110000
Q ss_pred ------CC---CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHH
Q 024042 198 ------NL---DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNF 268 (273)
Q Consensus 198 ------~~---~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 268 (273)
.. .......+..+..|+|+++|++|.++|.+..+.+.+.+ +++++++++++||+.+.++|+++.+.|.+|
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 340 (398)
T 2y6u_A 262 NLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTL-QNYHLDVIPGGSHLVNVEAPDLVIERINHH 340 (398)
T ss_dssp HHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHC-SSEEEEEETTCCTTHHHHSHHHHHHHHHHH
T ss_pred hhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhC-CCceEEEeCCCCccchhcCHHHHHHHHHHH
Confidence 00 00011334566779999999999999999999999999 899999999999999999999999999999
Q ss_pred hcc
Q 024042 269 LRG 271 (273)
Q Consensus 269 l~~ 271 (273)
|++
T Consensus 341 l~~ 343 (398)
T 2y6u_A 341 IHE 343 (398)
T ss_dssp HHH
T ss_pred HHH
Confidence 975
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=213.02 Aligned_cols=235 Identities=10% Similarity=0.031 Sum_probs=162.8
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCC--CCchhHhHHHHHHhhcCCCeEEeecCCCCCCCC-CCC
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGF--GPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHST-TRS 99 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~--~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~-~~~ 99 (273)
..++.+++++ ++..++|+.. +++|+|||+||+ +++. ..|..+++.|+++|+|+++|+||||.|. ...
T Consensus 19 ~~~~~~~v~~-~~~~~~~~~~--------~~~p~vv~lHG~G~~~~~-~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~ 88 (292)
T 3l80_A 19 AALNKEMVNT-LLGPIYTCHR--------EGNPCFVFLSGAGFFSTA-DNFANIIDKLPDSIGILTIDAPNSGYSPVSNQ 88 (292)
T ss_dssp -CCEEEEECC-TTSCEEEEEE--------CCSSEEEEECCSSSCCHH-HHTHHHHTTSCTTSEEEEECCTTSTTSCCCCC
T ss_pred hccCcceEEe-cCceEEEecC--------CCCCEEEEEcCCCCCcHH-HHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCc
Confidence 3467788888 5557887743 255899999965 5556 8899999999978999999999999999 555
Q ss_pred ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC------CC-cchHH--Hhhhh
Q 024042 100 IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM------KR-GDNEA--LVKRA 170 (273)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~------~~-~~~~~--~~~~~ 170 (273)
..++.+++++++.++++.++.++++++|||+||.+|+.+|.++|++++++|++++.... .. ..... .....
T Consensus 89 ~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (292)
T 3l80_A 89 ANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKL 168 (292)
T ss_dssp TTCCHHHHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTC
T ss_pred ccccHHHHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999954321 00 00000 00000
Q ss_pred hh---------hhhhhccCCCChH----HHHHHhhhhhccC--------CCCChh---hHHhhhhccEEEEecCCCCCCC
Q 024042 171 NL---------ERIDHLMLPESAS----QLRTLTGLAVSKN--------LDIVPD---FFFNDFVHDVLIVWGDQDQIFP 226 (273)
Q Consensus 171 ~~---------~~~~~~~~~~~~~----~~~~~~~~~~~~~--------~~~~~~---~~~~~~~~p~l~i~g~~D~~~~ 226 (273)
.. ......+.+.... ............. ...... ..+.. ..|+|+++|++|..++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~ 247 (292)
T 3l80_A 169 KTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE-KIPSIVFSESFREKEY 247 (292)
T ss_dssp CSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHH
T ss_pred hccCchhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchhhhhcchhhhhccCC-CCCEEEEEccCccccc
Confidence 00 0000001100000 0000000000000 000000 12223 6699999999999998
Q ss_pred hHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 227 LKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.+ . .+.+.+ ++.+ ++++++||+++.++|+++.+.|.+||++.
T Consensus 248 ~~-~-~~~~~~-~~~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 248 LE-S-EYLNKH-TQTK-LILCGQHHYLHWSETNSILEKVEQLLSNH 289 (292)
T ss_dssp HT-S-TTCCCC-TTCE-EEECCSSSCHHHHCHHHHHHHHHHHHHTC
T ss_pred hH-H-HHhccC-CCce-eeeCCCCCcchhhCHHHHHHHHHHHHHhc
Confidence 88 5 666666 7788 89999999999999999999999999864
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-33 Score=200.67 Aligned_cols=198 Identities=19% Similarity=0.242 Sum_probs=165.7
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH--HHHhhcCC-CeEEeecCCCCCCCCCCCcc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK--QVQFFAPH-FNVYVPDLIFFGHSTTRSIQ 101 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~--~~~~l~~~-~~v~~~d~~g~g~s~~~~~~ 101 (273)
++...++. +|.+++|+.+++ ..++++|+||++||++++. ..|.. +.+.|.+. |.|+++|+||+|.|......
T Consensus 7 ~~~~~~~~-~g~~l~~~~~~p---~~~~~~~~vv~~hG~~~~~-~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~ 81 (210)
T 1imj_A 7 QREGTIQV-QGQALFFREALP---GSGQARFSVLLLHGIRFSS-ETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAP 81 (210)
T ss_dssp ECCCCEEE-TTEEECEEEEEC---SSSCCSCEEEECCCTTCCH-HHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCS
T ss_pred cccceEee-CCeEEEEEEeCC---CCCCCCceEEEECCCCCcc-ceeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCc
Confidence 45566777 899999998863 1244689999999999998 88888 48888877 99999999999999877655
Q ss_pred ccHHHHH--HHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc
Q 024042 102 RTELFQA--ASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM 179 (273)
Q Consensus 102 ~~~~~~~--~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (273)
.+..+.. +++.++++.++.++++++|||+||.+++.++.++|++++++|++++......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~------------------- 142 (210)
T 1imj_A 82 APIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI------------------- 142 (210)
T ss_dssp SCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS-------------------
T ss_pred chhhhcchHHHHHHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccccc-------------------
Confidence 5666666 8899999999999999999999999999999999999999999998643210
Q ss_pred CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChh
Q 024042 180 LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPG 259 (273)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 259 (273)
.......+..|+++++|++|. ++.+..+.+ +.+ ++.+++.++++||+.+.++++
T Consensus 143 -----------------------~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~-~~~~~~~~~~~~H~~~~~~~~ 196 (210)
T 1imj_A 143 -----------------------NAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQL-PNHRVLIMKGAGHPCYLDKPE 196 (210)
T ss_dssp -----------------------CHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTS-SSEEEEEETTCCTTHHHHCHH
T ss_pred -----------------------cchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhC-CCCCEEEecCCCcchhhcCHH
Confidence 112234455699999999999 999999998 777 889999999999999889999
Q ss_pred hHHHHHHHHhccc
Q 024042 260 LFNSIVKNFLRGS 272 (273)
Q Consensus 260 ~~~~~i~~fl~~~ 272 (273)
++.+.+.+||++.
T Consensus 197 ~~~~~i~~fl~~~ 209 (210)
T 1imj_A 197 EWHTGLLDFLQGL 209 (210)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999864
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=210.07 Aligned_cols=242 Identities=15% Similarity=0.190 Sum_probs=168.0
Q ss_pred CceeEEecCCc-----ceEEeecCCccCCCCCCCCCeEEEEcCCCCchhH-------------hHHHHHH---hh-cCCC
Q 024042 25 LSSQTIDIDDE-----TTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIW-------------QWRKQVQ---FF-APHF 82 (273)
Q Consensus 25 ~~~~~~~~~~g-----~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~-------------~~~~~~~---~l-~~~~ 82 (273)
++...+++++| .+++|...+++ ...++|+|||+||++++. . .|..++. .| .++|
T Consensus 15 ~~~~~~~~~~g~~~~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~ 90 (366)
T 2pl5_A 15 AEFKELILNNGSVLSPVVIAYETYGTL---SSSKNNAILICHALSGDA-HAAGYHSGSDKKPGWWDDYIGPGKSFDTNQY 90 (366)
T ss_dssp EEESCEECTTSCEESSEEEEEEEEECC---CTTSCCEEEEECCSSCCS-CCSSBSSTTCSSCCTTTTTEETTSSEETTTC
T ss_pred EEeeeeeccCCccccCceeeEEeccCc---CCCCCceEEEecccCCcc-cccccccccccccchHHhhcCCccccccccc
Confidence 33444555544 57899888721 112468999999999888 5 6887774 44 5569
Q ss_pred eEEeecCCC--CCCCCCCC------c-------cccHHHHHHHHHHHHHHhCCccE-EEEEeccchHHHHHHHHhCCccc
Q 024042 83 NVYVPDLIF--FGHSTTRS------I-------QRTELFQAASLGKLLEKIGVERF-SVVGTSYGGFVAYHMARMWPERV 146 (273)
Q Consensus 83 ~v~~~d~~g--~g~s~~~~------~-------~~~~~~~~~~~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~~~~v 146 (273)
+|+++|+|| +|.|.... . .++.+++++++.+++++++.+++ +|+||||||.+|+.+|.++|+++
T Consensus 91 ~vi~~D~~G~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 170 (366)
T 2pl5_A 91 FIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSL 170 (366)
T ss_dssp EEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSE
T ss_pred EEEEecCCCcccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcHhh
Confidence 999999999 88886432 1 36899999999999999999998 89999999999999999999999
Q ss_pred ceEEEecCCCCCCCcchHHHhhhhh--h----------------------------------hhhhhcc----C------
Q 024042 147 EKVVIASSGVNMKRGDNEALVKRAN--L----------------------------------ERIDHLM----L------ 180 (273)
Q Consensus 147 ~~~v~~~~~~~~~~~~~~~~~~~~~--~----------------------------------~~~~~~~----~------ 180 (273)
+++|++++......... ....... . ..+...+ .
T Consensus 171 ~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (366)
T 2pl5_A 171 SNCIVMASTAEHSAMQI-AFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILS 249 (366)
T ss_dssp EEEEEESCCSBCCHHHH-HHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTT
T ss_pred hheeEeccCccCCCccc-hhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccc
Confidence 99999998765432110 0000000 0 0000000 0
Q ss_pred ------------------CCChHHHHHHhhhhhccCCCC--ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcC-
Q 024042 181 ------------------PESASQLRTLTGLAVSKNLDI--VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGK- 239 (273)
Q Consensus 181 ------------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~- 239 (273)
..................... .....+.++..|+|+++|++|.++|.+.++.+.+.+ +
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~ 328 (366)
T 2pl5_A 250 TDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSL-EA 328 (366)
T ss_dssp TTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHH-HH
T ss_pred hhhhHHHHHHHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHh-hh
Confidence 000000000000000000000 011245566779999999999999999999999998 6
Q ss_pred ---CcEEEEe-CCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 240 ---KARLEII-ENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 240 ---~~~~~~~-~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+++++++ +++||+.+.++|+++.+.|.+||++.
T Consensus 329 ~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 329 ADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLENP 365 (366)
T ss_dssp TTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHCC
T ss_pred cccCeEEEEeCCCCCcchhhcChhHHHHHHHHHHccC
Confidence 8999999 89999999999999999999999875
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=211.62 Aligned_cols=234 Identities=13% Similarity=0.120 Sum_probs=164.1
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHh---------HHHHHH---hh-cCCCeEEeecCCC-CCCCCCCC
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQ---------WRKQVQ---FF-APHFNVYVPDLIF-FGHSTTRS 99 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~---------~~~~~~---~l-~~~~~v~~~d~~g-~g~s~~~~ 99 (273)
+|.+++|...+++ ...++|+|||+||++++. .. |..++. .| .++|+|+++|+|| +|.|..+.
T Consensus 42 ~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~ 117 (377)
T 2b61_A 42 SYINVAYQTYGTL---NDEKNNAVLICHALTGDA-EPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPS 117 (377)
T ss_dssp CSEEEEEEEESCC---CTTCCCEEEEECCTTCCS-CSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTT
T ss_pred cceeEEEEecccc---cccCCCeEEEeCCCCCcc-ccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCc
Confidence 5667889888721 112368999999999998 76 888875 47 5559999999999 68877552
Q ss_pred c--------------cccHHHHHHHHHHHHHHhCCccEE-EEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH
Q 024042 100 I--------------QRTELFQAASLGKLLEKIGVERFS-VVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE 164 (273)
Q Consensus 100 ~--------------~~~~~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~ 164 (273)
. .++.+++++++.++++.++.++++ |+||||||.+|+.+|.++|++++++|++++..........
T Consensus 118 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 197 (377)
T 2b61_A 118 SINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIG 197 (377)
T ss_dssp SBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHH
T ss_pred ccCccccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchh
Confidence 1 368999999999999999999988 9999999999999999999999999999987543211000
Q ss_pred --H-----Hhh-----------------------hh------hhhhhhhccCCCC---------hHHHHHHhh-------
Q 024042 165 --A-----LVK-----------------------RA------NLERIDHLMLPES---------ASQLRTLTG------- 192 (273)
Q Consensus 165 --~-----~~~-----------------------~~------~~~~~~~~~~~~~---------~~~~~~~~~------- 192 (273)
. +.. .. ....+...+.... ......+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (377)
T 2b61_A 198 FNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFL 277 (377)
T ss_dssp HHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhhhc
Confidence 0 000 00 0000000000000 000111000
Q ss_pred -------------hhhccCC---CCChhhHHhhhhccEEEEecCCCCCCCh----HHHHHHHHHhcCCcEEEEeC-CCCC
Q 024042 193 -------------LAVSKNL---DIVPDFFFNDFVHDVLIVWGDQDQIFPL----KMATELKELLGKKARLEIIE-NTSH 251 (273)
Q Consensus 193 -------------~~~~~~~---~~~~~~~~~~~~~p~l~i~g~~D~~~~~----~~~~~~~~~~~~~~~~~~~~-~~gH 251 (273)
....... .......+.++..|+|+++|++|.++|. +..+.+.+.+ +++++++++ ++||
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~gH 356 (377)
T 2b61_A 278 ERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSG-VDLHFYEFPSDYGH 356 (377)
T ss_dssp TTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTT-CEEEEEEECCTTGG
T ss_pred cccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcC-CCceEEEeCCCCCc
Confidence 0000000 0011334566677999999999999999 8888888888 889999999 9999
Q ss_pred CcCcCChhhHHHHHHHHhccc
Q 024042 252 VPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 252 ~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+.+.++|+++.+.|.+||+++
T Consensus 357 ~~~~e~p~~~~~~i~~fl~~~ 377 (377)
T 2b61_A 357 DAFLVDYDQFEKRIRDGLAGN 377 (377)
T ss_dssp GHHHHCHHHHHHHHHHHHHTC
T ss_pred hhhhcCHHHHHHHHHHHHhcC
Confidence 999999999999999999864
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-35 Score=223.16 Aligned_cols=238 Identities=18% Similarity=0.228 Sum_probs=169.5
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCC----
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTR---- 98 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~---- 98 (273)
.+++.+++++ +|.+++|...+ ++|+||++||++++. ..|..+++.|+++|+|+++|+||||.|..+
T Consensus 3 ~~~~~~~~~~-~g~~~~~~~~g--------~~p~vv~lHG~~~~~-~~~~~~~~~l~~g~~v~~~D~~G~G~s~~~~~~~ 72 (304)
T 3b12_A 3 EGFERRLVDV-GDVTINCVVGG--------SGPALLLLHGFPQNL-HMWARVAPLLANEYTVVCADLRGYGGSSKPVGAP 72 (304)
Confidence 3566778888 89999998874 568899999999988 899999999986799999999999999876
Q ss_pred -CccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHH------------
Q 024042 99 -SIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA------------ 165 (273)
Q Consensus 99 -~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~------------ 165 (273)
...++.++.++++.++++.++.++++++|||+||.+|+.+|.++|++++++|++++...........
T Consensus 73 ~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (304)
T 3b12_A 73 DHANYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYF 152 (304)
Confidence 4567888999999999999998999999999999999999999999999999999865432211000
Q ss_pred ------Hhhhhh---hh-hhhh-ccC-------CCChHHHHHHhhhh------------hccCC----CCChhhHHhhhh
Q 024042 166 ------LVKRAN---LE-RIDH-LML-------PESASQLRTLTGLA------------VSKNL----DIVPDFFFNDFV 211 (273)
Q Consensus 166 ------~~~~~~---~~-~~~~-~~~-------~~~~~~~~~~~~~~------------~~~~~----~~~~~~~~~~~~ 211 (273)
...... .. .... ... .............. +.... .........++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 232 (304)
T 3b12_A 153 LQQPAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQ 232 (304)
Confidence 000000 00 0000 000 00000000000000 00000 000001145677
Q ss_pred ccEEEEecCCCCCC-ChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 212 HDVLIVWGDQDQIF-PLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 212 ~p~l~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+|+|+++|++|..+ +.+..+.+.+.. ++.+++++ ++||+.+.++|+++.+.|.+||++.
T Consensus 233 ~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (304)
T 3b12_A 233 CPALVFSGSAGLMHSLFEMQVVWAPRL-ANMRFASL-PGGHFFVDRFPDDTARILREFLSDA 292 (304)
Confidence 89999999999544 556666676666 78888889 9999999999999999999999864
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-31 Score=215.54 Aligned_cols=235 Identities=16% Similarity=0.215 Sum_probs=165.1
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHh---HHHHHH---hh-cCCCeEEeecCCC--CCCCCCCC-----
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQ---WRKQVQ---FF-APHFNVYVPDLIF--FGHSTTRS----- 99 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~---~~~~~~---~l-~~~~~v~~~d~~g--~g~s~~~~----- 99 (273)
+|.+++|...|+. ...++|+|||+||++++. .. |..++. .| .++|+|+++|+|| +|.|....
T Consensus 92 ~g~~l~y~~~G~~---~~~~~p~vvllHG~~~~~-~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~ 167 (444)
T 2vat_A 92 RDVPVAYKSWGRM---NVSRDNCVIVCHTLTSSA-HVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDA 167 (444)
T ss_dssp EEEEEEEEEESCC---CTTSCCEEEEECCTTCCS-CGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTT
T ss_pred cceeEEEEEecCC---CCCCCCeEEEECCCCccc-chhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCccc
Confidence 4556889888721 113468999999999988 77 888775 56 4559999999999 68876311
Q ss_pred ----------ccccHHHHHHHHHHHHHHhCCcc-EEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH--H-
Q 024042 100 ----------IQRTELFQAASLGKLLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE--A- 165 (273)
Q Consensus 100 ----------~~~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~--~- 165 (273)
..++.+++++++.+++++++.++ ++++||||||.+|+.+|.++|++|+++|++++.......... .
T Consensus 168 ~~~~~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~ 247 (444)
T 2vat_A 168 EGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFET 247 (444)
T ss_dssp C--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHH
T ss_pred ccccccccccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHH
Confidence 12589999999999999999988 999999999999999999999999999999987654211000 0
Q ss_pred ----Hh-----------------------hh------hhhhhhhhccCCCCh----------------------------
Q 024042 166 ----LV-----------------------KR------ANLERIDHLMLPESA---------------------------- 184 (273)
Q Consensus 166 ----~~-----------------------~~------~~~~~~~~~~~~~~~---------------------------- 184 (273)
+. .. .....+...+.....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (444)
T 2vat_A 248 QRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAG 327 (444)
T ss_dssp HHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC--------------------------
T ss_pred HHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCcccccccccccccccccccccccccccccc
Confidence 00 00 000000000000000
Q ss_pred ---HHHHHHh--------------------hhhhccC----CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh
Q 024042 185 ---SQLRTLT--------------------GLAVSKN----LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL 237 (273)
Q Consensus 185 ---~~~~~~~--------------------~~~~~~~----~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~ 237 (273)
.....+. ....... ........+.++..|+|+++|++|.++|.+..+.+.+.+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~ 407 (444)
T 2vat_A 328 QPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSI 407 (444)
T ss_dssp -CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHS
T ss_pred CchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHC
Confidence 0000000 0000000 000133445677789999999999999999999999999
Q ss_pred cCCcEEEEeC-CCCCCcCcCChhhHHHHHHHHhcccC
Q 024042 238 GKKARLEIIE-NTSHVPQIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 238 ~~~~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~~l 273 (273)
+++++++++ ++||+.+.++|+++.+.|.+||++++
T Consensus 408 -p~~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 408 -PNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQSL 443 (444)
T ss_dssp -TTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC--
T ss_pred -CCcEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHhc
Confidence 899999999 89999999999999999999998764
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-32 Score=203.80 Aligned_cols=216 Identities=17% Similarity=0.156 Sum_probs=157.6
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEecc
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSY 130 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~ 130 (273)
..++|+|||+||++++. ..|..+++.|.++|+|+++|+||+|.|......++.++.++++.++++.++.++++|+|||+
T Consensus 17 ~~~~~~vv~~HG~~~~~-~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~ 95 (267)
T 3fla_A 17 PDARARLVCLPHAGGSA-SFFFPLAKALAPAVEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVLRPFGDRPLALFGHSM 95 (267)
T ss_dssp TTCSEEEEEECCTTCCG-GGGHHHHHHHTTTEEEEEECCTTSGGGTTSCCCCSHHHHHHHHHHHTGGGTTSCEEEEEETH
T ss_pred CCCCceEEEeCCCCCCc-hhHHHHHHHhccCcEEEEecCCCCCCCCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCh
Confidence 56788999999999998 99999999998889999999999999988777789999999999999999889999999999
Q ss_pred chHHHHHHHHhCCcc----cceEEEecCCCCCCCcc-------hHHHhhhhhh-hhhhhccCCCChHHHHH---Hhhhhh
Q 024042 131 GGFVAYHMARMWPER----VEKVVIASSGVNMKRGD-------NEALVKRANL-ERIDHLMLPESASQLRT---LTGLAV 195 (273)
Q Consensus 131 Gg~~a~~~a~~~~~~----v~~~v~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~ 195 (273)
||.+|+.++.++|++ +++++++++........ .......... ........ ........ .....+
T Consensus 96 Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 174 (267)
T 3fla_A 96 GAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAML-ADPELLAMVLPAIRSDY 174 (267)
T ss_dssp HHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHH-HSHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhc-cCHHHHHHHHHHHHHHH
Confidence 999999999999986 89999998765432210 1111111100 00000000 00000000 000000
Q ss_pred c--cCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 196 S--KNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 196 ~--~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
. ........ ..+..|+++++|++|.+++.+..+.+.+.++.+.+++++++ ||+.+.++|+++.+.|.+||++.
T Consensus 175 ~~~~~~~~~~~---~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~~~~~~~~i~~fl~~~ 249 (267)
T 3fla_A 175 RAVETYRHEPG---RRVDCPVTVFTGDHDPRVSVGEARAWEEHTTGPADLRVLPG-GHFFLVDQAAPMIATMTEKLAGP 249 (267)
T ss_dssp HHHHHCCCCTT---CCBSSCEEEEEETTCTTCCHHHHHGGGGGBSSCEEEEEESS-STTHHHHTHHHHHHHHHHHTC--
T ss_pred Hhhhccccccc---CcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCceEEEecC-CceeeccCHHHHHHHHHHHhccc
Confidence 0 00000000 45667999999999999999999999988833499999997 99999999999999999999864
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.98 E-value=7.8e-31 Score=201.98 Aligned_cols=233 Identities=15% Similarity=0.222 Sum_probs=154.7
Q ss_pred ceeEEecCCc---ceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCC-
Q 024042 26 SSQTIDIDDE---TTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRS- 99 (273)
Q Consensus 26 ~~~~~~~~~g---~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~- 99 (273)
+...++++++ .+++|+..+ +++|+|||+||++++. ..|..+++.|++ +|+|+++|+||||.|..+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~g-------~~~p~lvllHG~~~~~-~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~ 85 (316)
T 3c5v_A 14 SMEDVEVENETGKDTFRVYKSG-------SEGPVLLLLHGGGHSA-LSWAVFTAAIISRVQCRIVALDLRSHGETKVKNP 85 (316)
T ss_dssp EEEEEEEEETTEEEEEEEEEEC-------SSSCEEEEECCTTCCG-GGGHHHHHHHHTTBCCEEEEECCTTSTTCBCSCT
T ss_pred ccceEEecCCcceEEEEEEecC-------CCCcEEEEECCCCccc-ccHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCc
Confidence 4467777443 478888764 3568999999999888 899999999998 7999999999999998643
Q ss_pred ccccHHHHHHHHHHHHHHh--CC-ccEEEEEeccchHHHHHHHHh--CCcccceEEEecCCCCCCCcchHHHhhhhh---
Q 024042 100 IQRTELFQAASLGKLLEKI--GV-ERFSVVGTSYGGFVAYHMARM--WPERVEKVVIASSGVNMKRGDNEALVKRAN--- 171 (273)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~--~~-~~i~l~G~S~Gg~~a~~~a~~--~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~--- 171 (273)
..++.+++++++.++++++ +. ++++|+||||||.+|+.+|.+ +|+ ++++|++++.................
T Consensus 86 ~~~~~~~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 164 (316)
T 3c5v_A 86 EDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLRGRP 164 (316)
T ss_dssp TCCCHHHHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHHHSC
T ss_pred cccCHHHHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHhhCc
Confidence 3578999999999999999 65 789999999999999999986 576 99999998642110000000000000
Q ss_pred -----h----hhhhhccCCCChHHH----HHHhhhh--------------hccCCCCC--h----------hhHHhhhhc
Q 024042 172 -----L----ERIDHLMLPESASQL----RTLTGLA--------------VSKNLDIV--P----------DFFFNDFVH 212 (273)
Q Consensus 172 -----~----~~~~~~~~~~~~~~~----~~~~~~~--------------~~~~~~~~--~----------~~~~~~~~~ 212 (273)
. ............... ....... +....... . .....++..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 244 (316)
T 3c5v_A 165 KTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPI 244 (316)
T ss_dssp SCBSSHHHHHHHHHHTTSCCCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHHHTTHHHHHHHSSS
T ss_pred cccccHHHHHHHhhhcccccchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhhhhhhHHHhhcCCC
Confidence 0 000000000000000 0000000 00000000 0 011235677
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
|+|+|+|++|.+.+... ..... ++.++++++++||+++.|+|+++.+.|.+||++
T Consensus 245 P~Lli~g~~D~~~~~~~---~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 299 (316)
T 3c5v_A 245 PKLLLLAGVDRLDKDLT---IGQMQ-GKFQMQVLPQCGHAVHEDAPDKVAEAVATFLIR 299 (316)
T ss_dssp CEEEEESSCCCCCHHHH---HHHHT-TCSEEEECCCCSSCHHHHSHHHHHHHHHHHHHH
T ss_pred CEEEEEecccccccHHH---HHhhC-CceeEEEcCCCCCcccccCHHHHHHHHHHHHHh
Confidence 99999999998654322 22233 678999999999999999999999999999964
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3.1e-32 Score=205.22 Aligned_cols=228 Identities=18% Similarity=0.196 Sum_probs=166.6
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccc
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQR 102 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~ 102 (273)
.++...+.. +|.+++|... ++|+||++||++++. ..|..+++.|.+. |.|+++|+||+|.|.......
T Consensus 20 ~m~~~~~~~-~g~~~~~~~g---------~~~~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~ 88 (270)
T 3rm3_A 20 HMSEQYPVL-SGAEPFYAEN---------GPVGVLLVHGFTGTP-HSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERT 88 (270)
T ss_dssp -CCCSSCCC-TTCCCEEECC---------SSEEEEEECCTTCCG-GGTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHTC
T ss_pred ccCCCccCC-CCCcccccCC---------CCeEEEEECCCCCCh-hHHHHHHHHHHHCCCEEEEeCCCCCCCCccccccC
Confidence 344555555 7887777642 458999999999998 8899999999886 999999999999997655567
Q ss_pred cHHHHHHHHHHHHHHhC--CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhh-hhhhhhhcc
Q 024042 103 TELFQAASLGKLLEKIG--VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA-NLERIDHLM 179 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 179 (273)
+.++.++++.++++.+. .++++++|||+||.+|+.++.++|+ ++++|+++++....... ...... ....+....
T Consensus 89 ~~~~~~~d~~~~i~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 165 (270)
T 3rm3_A 89 TFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIA--AGMTGGGELPRYLDSI 165 (270)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHH--HHSCC---CCSEEECC
T ss_pred CHHHHHHHHHHHHHHHHhhCCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccc--cchhcchhHHHHHHHh
Confidence 88899999999999997 7899999999999999999999999 99999999876542110 000000 000000000
Q ss_pred --------------CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC--cEE
Q 024042 180 --------------LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK--ARL 243 (273)
Q Consensus 180 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~ 243 (273)
................ .......++..|+|+++|++|.++|.+..+.+.+.+ ++ +++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~ 238 (270)
T 3rm3_A 166 GSDLKNPDVKELAYEKTPTASLLQLARLMA------QTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGI-SSTEKEI 238 (270)
T ss_dssp CCCCSCTTCCCCCCSEEEHHHHHHHHHHHH------HHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHS-CCSSEEE
T ss_pred CccccccchHhhcccccChhHHHHHHHHHH------HHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhc-CCCcceE
Confidence 0000111111111000 011234455679999999999999999999999998 54 499
Q ss_pred EEeCCCCCCcCcCCh-hhHHHHHHHHhccc
Q 024042 244 EIIENTSHVPQIENP-GLFNSIVKNFLRGS 272 (273)
Q Consensus 244 ~~~~~~gH~~~~~~~-~~~~~~i~~fl~~~ 272 (273)
++++++||+.+.+.+ +++.+.+.+||+++
T Consensus 239 ~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 239 VRLRNSYHVATLDYDQPMIIERSLEFFAKH 268 (270)
T ss_dssp EEESSCCSCGGGSTTHHHHHHHHHHHHHHH
T ss_pred EEeCCCCcccccCccHHHHHHHHHHHHHhc
Confidence 999999999998876 88999999999864
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.1e-31 Score=209.88 Aligned_cols=247 Identities=14% Similarity=0.123 Sum_probs=167.1
Q ss_pred CCceeEEecCCcceEEeecCCccCCC--CCCCCCeEEEEcCCCCchhHhHHHHHH------hhcCC-CeEEeecCCCCCC
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDH--KTLKKPSLVLIHGFGPEAIWQWRKQVQ------FFAPH-FNVYVPDLIFFGH 94 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~--~~~~~~~vi~~hG~~~~~~~~~~~~~~------~l~~~-~~v~~~d~~g~g~ 94 (273)
..+...+.+.||.+++++...+.... ..+++|+||++||++++. ..|..+.. .|++. |+|+++|+||+|.
T Consensus 26 ~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~-~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~ 104 (377)
T 1k8q_A 26 PAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASA-TNWISNLPNNSLAFILADAGYDVWLGNSRGNTW 104 (377)
T ss_dssp CCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCG-GGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTT
T ss_pred CceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCch-hhhhcCCCcccHHHHHHHCCCCEEEecCCCCCC
Confidence 34667788889999998877421100 013688999999999988 77765544 77776 9999999999999
Q ss_pred CCCC-----Cc----cccHHHHHH-HHHHHH----HHhCCccEEEEEeccchHHHHHHHHhCCc---ccceEEEecCCCC
Q 024042 95 STTR-----SI----QRTELFQAA-SLGKLL----EKIGVERFSVVGTSYGGFVAYHMARMWPE---RVEKVVIASSGVN 157 (273)
Q Consensus 95 s~~~-----~~----~~~~~~~~~-~~~~~~----~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~---~v~~~v~~~~~~~ 157 (273)
|... .. .++..+.++ |+.+++ +.++.++++++||||||.+|+.+|.++|+ +++++|++++...
T Consensus 105 S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~ 184 (377)
T 1k8q_A 105 ARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVAT 184 (377)
T ss_dssp SCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSC
T ss_pred CCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchh
Confidence 9852 11 457777777 666654 45688899999999999999999999998 8999999998764
Q ss_pred CCCcchHH----------Hhhhhhh----------hhhhhccC----------------------CCChHHHHHH-----
Q 024042 158 MKRGDNEA----------LVKRANL----------ERIDHLML----------------------PESASQLRTL----- 190 (273)
Q Consensus 158 ~~~~~~~~----------~~~~~~~----------~~~~~~~~----------------------~~~~~~~~~~----- 190 (273)
........ +...... ........ ..........
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (377)
T 1k8q_A 185 VKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNP 264 (377)
T ss_dssp CSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCC
T ss_pred cccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHhccCC
Confidence 43211000 0000000 00000000 0000000000
Q ss_pred -----------hhhhh---ccCCCC--------------ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcE
Q 024042 191 -----------TGLAV---SKNLDI--------------VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKAR 242 (273)
Q Consensus 191 -----------~~~~~---~~~~~~--------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 242 (273)
..... ...... .+...+.++..|+|+++|++|.++|.+.++.+.+.+ ++.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~ 343 (377)
T 1k8q_A 265 AGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKL-PNLI 343 (377)
T ss_dssp CCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTC-TTEE
T ss_pred CCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhC-cCcc
Confidence 00000 000000 011225667789999999999999999999999998 7777
Q ss_pred -EEEeCCCCCCcCc---CChhhHHHHHHHHhccc
Q 024042 243 -LEIIENTSHVPQI---ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 243 -~~~~~~~gH~~~~---~~~~~~~~~i~~fl~~~ 272 (273)
+++++++||+.++ ++|+++.+.|.+||+++
T Consensus 344 ~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 344 YHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp EEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred cEEecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 9999999999885 88999999999999864
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-31 Score=196.52 Aligned_cols=218 Identities=16% Similarity=0.160 Sum_probs=156.0
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-cc-cHHHHHHHHHHHHHHhCC--ccEEEE
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QR-TELFQAASLGKLLEKIGV--ERFSVV 126 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~-~~~~~~~~~~~~~~~~~~--~~i~l~ 126 (273)
++.|+||++||++++. ..|..+++.|.+. |.|+++|+||+|.|..... .. +.+++.+++.++++.+.. ++++++
T Consensus 20 ~~~~~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~l~ 98 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGSP-NDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAKYAKVFVF 98 (251)
T ss_dssp CSSEEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCceEEEeCCCCCCH-HHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 3668999999999999 8999999999876 9999999999999964322 23 777778888888888764 499999
Q ss_pred EeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc-CCCChHHHHHHhhhhhccCC--CCCh
Q 024042 127 GTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM-LPESASQLRTLTGLAVSKNL--DIVP 203 (273)
Q Consensus 127 G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~ 203 (273)
|||+||.+++.++.++|++++++++++|............ .... ....... .................... ....
T Consensus 99 G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (251)
T 3dkr_A 99 GLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGF-LKYA-EYMNRLAGKSDESTQILAYLPGQLAAIDQFATTV 176 (251)
T ss_dssp ESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHH-HHHH-HHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHH-HHHH-HHHHhhcccCcchhhHHhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998876543322222 1111 1111111 11111111111110000000 0001
Q ss_pred hhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcC--CcEEEEeCCCCCCcCcCC-hhhHHHHHHHHhccc
Q 024042 204 DFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGK--KARLEIIENTSHVPQIEN-PGLFNSIVKNFLRGS 272 (273)
Q Consensus 204 ~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~~ 272 (273)
.....++..|+++++|++|.+++.+..+.+.+.+.. +.++++++++||..+.+. ++++.+.+.+||++.
T Consensus 177 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 248 (251)
T 3dkr_A 177 AADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQE 248 (251)
T ss_dssp HHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCTTTSTTHHHHHHHHHHHHHTT
T ss_pred hccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCCcccccccchhHHHHHHHHHHHhh
Confidence 223445567999999999999999999999999833 459999999999998875 999999999999864
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-30 Score=200.62 Aligned_cols=127 Identities=20% Similarity=0.309 Sum_probs=112.6
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC----------CCeEEeecCCCCCC
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP----------HFNVYVPDLIFFGH 94 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~----------~~~v~~~d~~g~g~ 94 (273)
+....+++ +|.+++|.... ...++.++|||+||++++. ..|..+++.|.+ +|+|+++|+||||.
T Consensus 68 ~~~~~~~i-~g~~i~~~~~~----~~~~~~~plll~HG~~~s~-~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~ 141 (388)
T 4i19_A 68 YPQFTTEI-DGATIHFLHVR----SPEPDATPMVITHGWPGTP-VEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGL 141 (388)
T ss_dssp SCEEEEEE-TTEEEEEEEEC----CSSTTCEEEEEECCTTCCG-GGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGG
T ss_pred CCcEEEEE-CCeEEEEEEcc----CCCCCCCeEEEECCCCCCH-HHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCC
Confidence 45566666 99999998875 3345678999999999999 899999999988 89999999999999
Q ss_pred CCCCCc-cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCC
Q 024042 95 STTRSI-QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 95 s~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
|..+.. .++..+.++++.++++.++.++++++||||||.+++.+|.++|+++++++++++...
T Consensus 142 S~~~~~~~~~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 205 (388)
T 4i19_A 142 SGPLKSAGWELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTN 205 (388)
T ss_dssp GCCCSSCCCCHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCC
Confidence 987765 578999999999999999999999999999999999999999999999999987544
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-29 Score=181.63 Aligned_cols=196 Identities=13% Similarity=0.075 Sum_probs=147.5
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCC-----CCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCC
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGF-----GPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTT 97 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~-----~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~ 97 (273)
..+...++..+| +++++.+.++ ..++.|+||++||+ ..+. ..|..+.+.|.+. |.|+++|+||+|.|..
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 79 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPK---GIEKSVTGIICHPHPLHGGTMNN-KVVTTLAKALDELGLKTVRFNFRGVGKSQG 79 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCS---SCCCSEEEEEECSCGGGTCCTTC-HHHHHHHHHHHHTTCEEEEECCTTSTTCCS
T ss_pred ccceEEEECCCc-eEEEEEEcCC---CCCCCCEEEEEcCCCCCCCccCC-chHHHHHHHHHHCCCEEEEEecCCCCCCCC
Confidence 456778888899 9998887632 23467899999993 3334 6678888888876 9999999999999986
Q ss_pred CCc-cc-cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhh
Q 024042 98 RSI-QR-TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERI 175 (273)
Q Consensus 98 ~~~-~~-~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (273)
... .. ..++..+.+..+.+.++.++++++|||+||.+++.++ .+| +++++|++++......
T Consensus 80 ~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~~--------------- 142 (208)
T 3trd_A 80 RYDNGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYEG--------------- 142 (208)
T ss_dssp CCCTTTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSGG---------------
T ss_pred CccchHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccCC---------------
Confidence 532 11 2333333333333444668999999999999999999 666 7999999998761100
Q ss_pred hhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc
Q 024042 176 DHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255 (273)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 255 (273)
.........|+++++|++|.++|.+..+.+.+.++.+.++++++++||++..
T Consensus 143 ----------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 194 (208)
T 3trd_A 143 ----------------------------FASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHG 194 (208)
T ss_dssp ----------------------------GTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSSCTT
T ss_pred ----------------------------chhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCcccc
Confidence 0001112349999999999999999999999999444999999999999876
Q ss_pred CChhhHHHHHHHHhc
Q 024042 256 ENPGLFNSIVKNFLR 270 (273)
Q Consensus 256 ~~~~~~~~~i~~fl~ 270 (273)
+ .+++.+.+.+||+
T Consensus 195 ~-~~~~~~~i~~fl~ 208 (208)
T 3trd_A 195 R-LIELRELLVRNLA 208 (208)
T ss_dssp C-HHHHHHHHHHHHC
T ss_pred c-HHHHHHHHHHHhC
Confidence 6 4889999999984
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=197.29 Aligned_cols=220 Identities=16% Similarity=0.180 Sum_probs=164.8
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHH
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELF 106 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~ 106 (273)
..+.. +|.++.++.+.+ . +.|+||++||++++. ..|..++..|.+. |.|+++|+||+|.|.......+...
T Consensus 9 ~~~~~-~g~~l~~~~~~p----~--~~p~vv~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~~~~~~~ 80 (290)
T 3ksr_A 9 IEIPV-GQDELSGTLLTP----T--GMPGVLFVHGWGGSQ-HHSLVRAREAVGLGCICMTFDLRGHEGYASMRQSVTRAQ 80 (290)
T ss_dssp EEEEE-TTEEEEEEEEEE----E--SEEEEEEECCTTCCT-TTTHHHHHHHHTTTCEEECCCCTTSGGGGGGTTTCBHHH
T ss_pred EEecC-CCeEEEEEEecC----C--CCcEEEEeCCCCCCc-CcHHHHHHHHHHCCCEEEEeecCCCCCCCCCcccccHHH
Confidence 34455 888999998862 1 789999999999998 8999999999886 9999999999999987776778888
Q ss_pred HHHHHHHHHHHhC------CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc--hHHHhhhhhhhhhhhc
Q 024042 107 QAASLGKLLEKIG------VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD--NEALVKRANLERIDHL 178 (273)
Q Consensus 107 ~~~~~~~~~~~~~------~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 178 (273)
.++|+.++++.+. .++++++|||+||.+++.++.++| ++++++++|........ ........
T Consensus 81 ~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~~~~~~~-------- 150 (290)
T 3ksr_A 81 NLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKVSLNAD-------- 150 (290)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBHHHHHHS--------
T ss_pred HHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhcccccccCC--------
Confidence 8999999998873 358999999999999999999987 89999998876543221 00000000
Q ss_pred cCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc--CCcEEEEeCCCCCCcCc-
Q 024042 179 MLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG--KKARLEIIENTSHVPQI- 255 (273)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~- 255 (273)
.....+.... ..............+..|+|+++|++|.+++.+..+.+.+.+. .+.++++++++||.++.
T Consensus 151 ------~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 223 (290)
T 3ksr_A 151 ------PDLMDYRRRA-LAPGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVK 223 (290)
T ss_dssp ------TTHHHHTTSC-CCGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSH
T ss_pred ------hhhhhhhhhh-hhhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCCCceEEEcCCCCCCCCcc
Confidence 0000000000 0001112233455667799999999999999999999999982 23569999999998755
Q ss_pred CChhhHHHHHHHHhccc
Q 024042 256 ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 256 ~~~~~~~~~i~~fl~~~ 272 (273)
++++++.+.+.+||++.
T Consensus 224 ~~~~~~~~~i~~fl~~~ 240 (290)
T 3ksr_A 224 EHQQEYTRALIDWLTEM 240 (290)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 47889999999999764
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=198.72 Aligned_cols=215 Identities=13% Similarity=0.096 Sum_probs=149.7
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcC---CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAP---HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVG 127 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~---~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G 127 (273)
.+++++|||+||++++. ..|..+.+.|++ +|+|+++|+||+|.|..+. ..+.++.++++.++++.+ .++++++|
T Consensus 33 ~~~~~~vvllHG~~~~~-~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~-~~~~~~~~~~l~~~~~~~-~~~~~lvG 109 (302)
T 1pja_A 33 RASYKPVIVVHGLFDSS-YSFRHLLEYINETHPGTVVTVLDLFDGRESLRPL-WEQVQGFREAVVPIMAKA-PQGVHLIC 109 (302)
T ss_dssp --CCCCEEEECCTTCCG-GGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH-HHHHHHHHHHHHHHHHHC-TTCEEEEE
T ss_pred cCCCCeEEEECCCCCCh-hHHHHHHHHHHhcCCCcEEEEeccCCCccchhhH-HHHHHHHHHHHHHHhhcC-CCcEEEEE
Confidence 45678999999999998 889999999987 4999999999999987543 357778888888888887 68999999
Q ss_pred eccchHHHHHHHHhCCc-ccceEEEecCCCCCCCcchHHHhhhhh-----------hhhh------hhcc-CCCChHHHH
Q 024042 128 TSYGGFVAYHMARMWPE-RVEKVVIASSGVNMKRGDNEALVKRAN-----------LERI------DHLM-LPESASQLR 188 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~-~v~~~v~~~~~~~~~~~~~~~~~~~~~-----------~~~~------~~~~-~~~~~~~~~ 188 (273)
|||||.+|+.++.++|+ +|+++|+++++................ .... .... .+.......
T Consensus 110 hS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (302)
T 1pja_A 110 YSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYL 189 (302)
T ss_dssp ETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGGGSTGGGGBCCTTCHHHHH
T ss_pred ECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHHHhhhhhcccChhhhhhhh
Confidence 99999999999999999 799999999876543221111100000 0000 0000 011111111
Q ss_pred HHhh--hhhccCCCCC----hhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC----------------------
Q 024042 189 TLTG--LAVSKNLDIV----PDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK---------------------- 240 (273)
Q Consensus 189 ~~~~--~~~~~~~~~~----~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~---------------------- 240 (273)
.... .......... ....+.++. |+++++|++|.++|++.++.+.+.. ++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l 267 (302)
T 1pja_A 190 NASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYD-ANETVLEMEEQLVYLRDSFGLKTL 267 (302)
T ss_dssp HHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEEC-TTCCEECGGGSHHHHTTTTSHHHH
T ss_pred ccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcC-CcccccchhhhhhhhhhhhchhhH
Confidence 1000 0000000000 133456677 9999999999999988777664333 33
Q ss_pred -----cEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 241 -----ARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 241 -----~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.++++++++||+.+.++|+++.+.|.+||+
T Consensus 268 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 302 (302)
T 1pja_A 268 LARGAIVRCPMAGISHTAWHSNRTLYETCIEPWLS 302 (302)
T ss_dssp HHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGCC
T ss_pred hhcCCeEEEEecCccccccccCHHHHHHHHHHhcC
Confidence 899999999999999999999999999984
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-29 Score=186.01 Aligned_cols=194 Identities=15% Similarity=0.124 Sum_probs=149.7
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch----hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA----IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ 101 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~----~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~ 101 (273)
...+..++| ++.++.+. +.+++.|+||++||+++.. ...|..+++.|.+. |.|+++|+||+|.|......
T Consensus 25 ~~~~~~~~g-~l~~~~~~----p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~ 99 (249)
T 2i3d_A 25 EVIFNGPAG-RLEGRYQP----SKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDH 99 (249)
T ss_dssp EEEEEETTE-EEEEEEEC----CSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCS
T ss_pred EEEEECCCc-eEEEEEEc----CCCCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC
Confidence 677888777 78777664 2245678999999974222 13567788888776 99999999999998765432
Q ss_pred ccHHHHHHHHHHHHHHhC-----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhh
Q 024042 102 RTELFQAASLGKLLEKIG-----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERID 176 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (273)
..... +++.++++.+. .++++++|||+||.+++.++.++|+ ++++|++++.......
T Consensus 100 -~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~--------------- 161 (249)
T 2i3d_A 100 -GAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYDF--------------- 161 (249)
T ss_dssp -SHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSCC---------------
T ss_pred -ccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhhh---------------
Confidence 33333 66666665552 2479999999999999999999998 9999999987653210
Q ss_pred hccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcC----CcEEEEeCCCCCC
Q 024042 177 HLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGK----KARLEIIENTSHV 252 (273)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~ 252 (273)
.....+..|+++++|++|.+++.+..+.+.+.+.. +.+++++++++|.
T Consensus 162 ----------------------------~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 213 (249)
T 2i3d_A 162 ----------------------------SFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHF 213 (249)
T ss_dssp ----------------------------TTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTT
T ss_pred ----------------------------hhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcc
Confidence 01123445999999999999999999999999832 7899999999999
Q ss_pred cCcCChhhHHHHHHHHhccc
Q 024042 253 PQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 253 ~~~~~~~~~~~~i~~fl~~~ 272 (273)
.. ++++++.+.+.+||++.
T Consensus 214 ~~-~~~~~~~~~i~~fl~~~ 232 (249)
T 2i3d_A 214 FN-GKVDELMGECEDYLDRR 232 (249)
T ss_dssp CT-TCHHHHHHHHHHHHHHH
T ss_pred cc-cCHHHHHHHHHHHHHHh
Confidence 87 78999999999999764
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-29 Score=188.47 Aligned_cols=235 Identities=13% Similarity=0.113 Sum_probs=157.3
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhH-HHHHHhhcCCCeEEeecCCCCCCCCCCCccc
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQW-RKQVQFFAPHFNVYVPDLIFFGHSTTRSIQR 102 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~-~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~ 102 (273)
...+...||.+++++.+.++ ..++.|+||++||++ ++. ..| ..+.+.|++.|.|+++|+||+|.+.. ..
T Consensus 5 ~~~~~~~dg~~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~~-~~~~~~~~~~l~~~~~v~~~d~~~~~~~~~---~~ 77 (275)
T 3h04_A 5 KYKVITKDAFALPYTIIKAK---NQPTKGVIVYIHGGGLMFGKA-NDLSPQYIDILTEHYDLIQLSYRLLPEVSL---DC 77 (275)
T ss_dssp EEEEECTTSCEEEEEEECCS---SSSCSEEEEEECCSTTTSCCT-TCSCHHHHHHHTTTEEEEEECCCCTTTSCH---HH
T ss_pred EEEEecCCcEEEEEEEEccC---CCCCCCEEEEEECCcccCCch-hhhHHHHHHHHHhCceEEeeccccCCcccc---ch
Confidence 45566779999998887632 234678999999988 555 444 47778887779999999999987632 23
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH---HHhhh----hhhhhh
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE---ALVKR----ANLERI 175 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~---~~~~~----~~~~~~ 175 (273)
..++..+.+..+.+.++.++++++|||+||.+|+.++.+ ++++++|+++|.......... ..... ......
T Consensus 78 ~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (275)
T 3h04_A 78 IIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQSINETMI 155 (275)
T ss_dssp HHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHHHHHTTSCHHHH
T ss_pred hHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchhhcccccchHHHH
Confidence 444555555556666677899999999999999999998 789999999998765322100 00000 000000
Q ss_pred hh------ccCCCChHHHHHH--hhhh------hccC-----CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHH
Q 024042 176 DH------LMLPESASQLRTL--TGLA------VSKN-----LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKEL 236 (273)
Q Consensus 176 ~~------~~~~~~~~~~~~~--~~~~------~~~~-----~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~ 236 (273)
.. ............. .... .... ........+.++. |+|+++|++|.++|.+.++.+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~~~~~~~~~~~~ 234 (275)
T 3h04_A 156 AQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDVPVEESEHIMNH 234 (275)
T ss_dssp HTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSSCTHHHHHHHTT
T ss_pred hcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCCCChHHHHHHHHh
Confidence 00 0000000000000 0000 0000 0001222235555 999999999999999999999998
Q ss_pred hcCCcEEEEeCCCCCCcCcCCh---hhHHHHHHHHhccc
Q 024042 237 LGKKARLEIIENTSHVPQIENP---GLFNSIVKNFLRGS 272 (273)
Q Consensus 237 ~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 272 (273)
+ ++.++++++++||.++.+.+ +++.+.+.+||+++
T Consensus 235 ~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~ 272 (275)
T 3h04_A 235 V-PHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAI 272 (275)
T ss_dssp C-SSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHH
T ss_pred c-CCceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHH
Confidence 8 88999999999999988888 58999999999875
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-29 Score=184.17 Aligned_cols=212 Identities=16% Similarity=0.122 Sum_probs=157.7
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccc--
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQR-- 102 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~-- 102 (273)
+...+++ +|.++.++... +++|+||++||++++. ..|..+++.|.+. |.|+++|+||+|.|.......
T Consensus 4 ~~~~~~~-~g~~~~~~~~~-------~~~~~vv~~hG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~ 74 (238)
T 1ufo_A 4 RTERLTL-AGLSVLARIPE-------APKALLLALHGLQGSK-EHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKS 74 (238)
T ss_dssp EEEEEEE-TTEEEEEEEES-------SCCEEEEEECCTTCCH-HHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTS
T ss_pred eeccccc-CCEEEEEEecC-------CCccEEEEECCCcccc-hHHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccc
Confidence 3445566 78777666553 2788999999999998 8899999988876 999999999999987654332
Q ss_pred ---------cHHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhh
Q 024042 103 ---------TELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA 170 (273)
Q Consensus 103 ---------~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~ 170 (273)
+.+..++++.++++.+ +.++++++|||+||.+|+.++.++|+.+.+++++++.......... .
T Consensus 75 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 149 (238)
T 1ufo_A 75 PRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQ-----V 149 (238)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTTC-----C
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhhhh-----c
Confidence 2556667776666654 4489999999999999999999999989999988875443211100 0
Q ss_pred hhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhh-hccEEEEecCCCCCCChHHHHHHHHHhcC------CcEE
Q 024042 171 NLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDF-VHDVLIVWGDQDQIFPLKMATELKELLGK------KARL 243 (273)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~~------~~~~ 243 (273)
.. +........ ........++ ..|+++++|++|.++|.+.++.+.+.+ + +.++
T Consensus 150 --------~~---~~~~~~~~~--------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~ 209 (238)
T 1ufo_A 150 --------VE---DPGVLALYQ--------APPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEAL-RPHYPEGRLAR 209 (238)
T ss_dssp --------CC---CHHHHHHHH--------SCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHH-GGGCTTCCEEE
T ss_pred --------cC---Ccccchhhc--------CChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHH-hhcCCCCceEE
Confidence 00 000111100 0122233445 669999999999999999999999998 5 8899
Q ss_pred EEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 244 EIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 244 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
++++++||..+.+.++++.+.+.+|+++
T Consensus 210 ~~~~~~~H~~~~~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 210 FVEEGAGHTLTPLMARVGLAFLEHWLEA 237 (238)
T ss_dssp EEETTCCSSCCHHHHHHHHHHHHHHHHC
T ss_pred EEeCCCCcccHHHHHHHHHHHHHHHHhc
Confidence 9999999999888888888888888765
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-28 Score=182.09 Aligned_cols=197 Identities=18% Similarity=0.108 Sum_probs=156.1
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCC------
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRS------ 99 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~------ 99 (273)
..++.+.+|.++.++.+.+ .+++.|+||++||++++. ..|..+++.|.+. |.|+++|+||+|.|....
T Consensus 5 ~~~~~~~~g~~l~~~~~~p----~~~~~p~vv~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~ 79 (236)
T 1zi8_A 5 GISIQSYDGHTFGALVGSP----AKAPAPVIVIAQDIFGVN-AFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDER 79 (236)
T ss_dssp TCCEECTTSCEECEEEECC----SSCSEEEEEEECCTTBSC-HHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHH
T ss_pred eEEEecCCCCeEEEEEECC----CCCCCCEEEEEcCCCCCC-HHHHHHHHHHHhCCcEEEeccccccCCCcccccccchh
Confidence 3456767898898887762 245678999999999988 7899999988875 999999999999886421
Q ss_pred ---------ccccHHHHHHHHHHHHHHhC-----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHH
Q 024042 100 ---------IQRTELFQAASLGKLLEKIG-----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA 165 (273)
Q Consensus 100 ---------~~~~~~~~~~~~~~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~ 165 (273)
...+.....+++.++++.+. .++++++|||+||.+|+.++.++| +++++.+.+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~------- 150 (236)
T 1zi8_A 80 QREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE------- 150 (236)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG-------
T ss_pred hhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc-------
Confidence 12355667888888888885 478999999999999999999988 9999888764311
Q ss_pred HhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc--CCcEE
Q 024042 166 LVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG--KKARL 243 (273)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~ 243 (273)
.......++..|+++++|++|.++|.+..+.+.+.+. ++.++
T Consensus 151 ------------------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 194 (236)
T 1zi8_A 151 ------------------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQV 194 (236)
T ss_dssp ------------------------------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEE
T ss_pred ------------------------------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceE
Confidence 0112233445699999999999999999999998882 48899
Q ss_pred EEeCCCCCCcCcCCh--------hhHHHHHHHHhcccC
Q 024042 244 EIIENTSHVPQIENP--------GLFNSIVKNFLRGSL 273 (273)
Q Consensus 244 ~~~~~~gH~~~~~~~--------~~~~~~i~~fl~~~l 273 (273)
+++++++|.+..+.+ +++.+.+.+||++++
T Consensus 195 ~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l 232 (236)
T 1zi8_A 195 HWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQ 232 (236)
T ss_dssp EEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGC
T ss_pred EEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhc
Confidence 999999998776544 468899999998764
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=197.03 Aligned_cols=210 Identities=15% Similarity=0.045 Sum_probs=149.1
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh-CCccEEEEEeccc
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI-GVERFSVVGTSYG 131 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~G 131 (273)
++|+|||+||++++. ..|..+++.|.++|+|+++|+||+|.|......++.+++++++.++++.+ +.++++|+|||||
T Consensus 50 ~~~~lvllHG~~~~~-~~~~~l~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~lvG~S~G 128 (280)
T 3qmv_A 50 APLRLVCFPYAGGTV-SAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHRLTHDYALFGHSMG 128 (280)
T ss_dssp CSEEEEEECCTTCCG-GGGTTHHHHHCTTEEEEECCCTTSGGGTTSCCCCSHHHHHHHHHHHHHHTTCSSSEEEEEETHH
T ss_pred CCceEEEECCCCCCh-HHHHHHHHhcCCCceEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeCHh
Confidence 347899999999999 89999999999889999999999999987777789999999999999999 7789999999999
Q ss_pred hHHHHHHHHhCCcccc----eEEEecCCCCCCCcc-------hHHHhhhhhhh-hhhh------ccCCCChHHHHHHhhh
Q 024042 132 GFVAYHMARMWPERVE----KVVIASSGVNMKRGD-------NEALVKRANLE-RIDH------LMLPESASQLRTLTGL 193 (273)
Q Consensus 132 g~~a~~~a~~~~~~v~----~~v~~~~~~~~~~~~-------~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~ 193 (273)
|.+|+.+|.++|+++. .++++++........ ...+....... .... .........+......
T Consensus 129 g~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (280)
T 3qmv_A 129 ALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRA 208 (280)
T ss_dssp HHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHHHHHHHHHHHH
Confidence 9999999999988877 777776543322110 11111110000 0000 0000001111111100
Q ss_pred hhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc--CChhhHHHHHHHHh
Q 024042 194 AVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI--ENPGLFNSIVKNFL 269 (273)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~i~~fl 269 (273)
.... . . .....+..|+++++|++|.+++.+..+.+.+.+....++++++ +||+.+. ++++++.+.|.+||
T Consensus 209 ~~~~--~--~-~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-ggH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 209 CERY--D--W-HPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLP-GNHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp HHTC--C--C-CCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSSCEEEEEEE-EETTGGGSSHHHHHHHHHHHTTC
T ss_pred HHhc--c--c-cCCCceecCeEEEEecCCCCcChHHHHHHHHhcCCceEEEEec-CCCeEEcCchhHHHHHHHHHhhC
Confidence 0000 0 0 0023456699999999999999999998888883346777777 6999998 88999999998885
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-30 Score=188.00 Aligned_cols=195 Identities=17% Similarity=0.129 Sum_probs=151.9
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhH--hHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc--
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIW--QWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ-- 101 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~--~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~-- 101 (273)
...+.. +|.++.++.+.+ .++.|+||++||++++. . .+..+.+.|.+. |.|+++|+||+|.|......
T Consensus 14 ~~~~~~-~g~~l~~~~~~p-----~~~~p~vv~~hG~~~~~-~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~ 86 (223)
T 2o2g_A 14 AVSVSV-GEVKLKGNLVIP-----NGATGIVLFAHGSGSSR-YSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRH 86 (223)
T ss_dssp EEEEEE-TTEEEEEEEECC-----TTCCEEEEEECCTTCCT-TCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHCS
T ss_pred EEEEec-CCeEEEEEEecC-----CCCceEEEEecCCCCCC-CccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhhc
Confidence 344444 888999887752 23678999999999877 5 455778888775 99999999999987654333
Q ss_pred --ccHHHHHHHHHHHHHHhCC------ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhh
Q 024042 102 --RTELFQAASLGKLLEKIGV------ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE 173 (273)
Q Consensus 102 --~~~~~~~~~~~~~~~~~~~------~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
.+.++.++++.++++.+.. ++++++|||+||.+++.++.++|++++++|++++.....
T Consensus 87 ~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~-------------- 152 (223)
T 2o2g_A 87 LRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA-------------- 152 (223)
T ss_dssp STTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC--------------
T ss_pred ccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC--------------
Confidence 6777888888888887743 389999999999999999999999999999998853211
Q ss_pred hhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCc
Q 024042 174 RIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVP 253 (273)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 253 (273)
.....++..|+++++|++|..+|.+..+.+.+. .++.+++.++++||.+
T Consensus 153 ------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~H~~ 201 (223)
T 2o2g_A 153 ------------------------------PSALPHVKAPTLLIVGGYDLPVIAMNEDALEQL-QTSKRLVIIPRASHLF 201 (223)
T ss_dssp ------------------------------TTTGGGCCSCEEEEEETTCHHHHHHHHHHHHHC-CSSEEEEEETTCCTTC
T ss_pred ------------------------------HHHHhcCCCCEEEEEccccCCCCHHHHHHHHhh-CCCeEEEEeCCCCccc
Confidence 012233445999999999999986655555444 4789999999999997
Q ss_pred Cc-CChhhHHHHHHHHhcccC
Q 024042 254 QI-ENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 254 ~~-~~~~~~~~~i~~fl~~~l 273 (273)
.. +.++++.+.+.+||+++|
T Consensus 202 ~~~~~~~~~~~~i~~fl~~~l 222 (223)
T 2o2g_A 202 EEPGALTAVAQLASEWFMHYL 222 (223)
T ss_dssp CSTTHHHHHHHHHHHHHHHHC
T ss_pred CChHHHHHHHHHHHHHHHHhc
Confidence 65 456899999999998764
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=190.84 Aligned_cols=176 Identities=22% Similarity=0.285 Sum_probs=139.7
Q ss_pred CCCCeEEEEcCCCCchhHhHH-------HHHHhhcCC-CeEEeecCCCCCCCCCCCcccc--------------------
Q 024042 52 LKKPSLVLIHGFGPEAIWQWR-------KQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRT-------------------- 103 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~-------~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~-------------------- 103 (273)
..+++|||+||++.+. ..|. .++..|.+. |.|+++|+||+|.|.......+
T Consensus 60 ~~~~~vvl~HG~g~~~-~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (328)
T 1qlw_A 60 AKRYPITLIHGCCLTG-MTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGH 138 (328)
T ss_dssp CCSSCEEEECCTTCCG-GGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBCCCH
T ss_pred CCCccEEEEeCCCCCC-CccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccCcccccceeccch
Confidence 3568899999999888 7787 477777665 9999999999999986543211
Q ss_pred --------------------------HHH------------------HHHHHHHHHHHhCCccEEEEEeccchHHHHHHH
Q 024042 104 --------------------------ELF------------------QAASLGKLLEKIGVERFSVVGTSYGGFVAYHMA 139 (273)
Q Consensus 104 --------------------------~~~------------------~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 139 (273)
.++ ..+++.++++.++ +++++|||+||.+++.++
T Consensus 139 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~lvGhS~GG~~a~~~a 216 (328)
T 1qlw_A 139 EAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD--GTVLLSHSQSGIYPFQTA 216 (328)
T ss_dssp HHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT--SEEEEEEGGGTTHHHHHH
T ss_pred hhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC--CceEEEECcccHHHHHHH
Confidence 333 6677788888775 899999999999999999
Q ss_pred HhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEec
Q 024042 140 RMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWG 219 (273)
Q Consensus 140 ~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g 219 (273)
.++|++++++|+++|.... ...........|+|+++|
T Consensus 217 ~~~p~~v~~~v~~~p~~~~-------------------------------------------~~~~~~~~~~~PvLii~G 253 (328)
T 1qlw_A 217 AMNPKGITAIVSVEPGECP-------------------------------------------KPEDVKPLTSIPVLVVFG 253 (328)
T ss_dssp HHCCTTEEEEEEESCSCCC-------------------------------------------CGGGCGGGTTSCEEEEEC
T ss_pred HhChhheeEEEEeCCCCCC-------------------------------------------CHHHHhhccCCCEEEEec
Confidence 9999999999999975410 001111223359999999
Q ss_pred CCCCCCCh-----HHHHHHHHHhc---CCcEEEEeCCCC-----CCcCcCC-hhhHHHHHHHHhcccC
Q 024042 220 DQDQIFPL-----KMATELKELLG---KKARLEIIENTS-----HVPQIEN-PGLFNSIVKNFLRGSL 273 (273)
Q Consensus 220 ~~D~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~g-----H~~~~~~-~~~~~~~i~~fl~~~l 273 (273)
++|.++|. +.++.+.+.+. .++++++++++| |+.+.+. ++++.+.|.+||++++
T Consensus 254 ~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~ 321 (328)
T 1qlw_A 254 DHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNT 321 (328)
T ss_dssp SSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred cCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhcc
Confidence 99999996 88888888872 489999999665 9998887 9999999999998753
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-28 Score=173.34 Aligned_cols=177 Identities=15% Similarity=0.163 Sum_probs=135.1
Q ss_pred CCCeEEEEcCCCCch--hHhHHH-HHHhhcC--CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC-ccEEEE
Q 024042 53 KKPSLVLIHGFGPEA--IWQWRK-QVQFFAP--HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV-ERFSVV 126 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~--~~~~~~-~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~ 126 (273)
+.|+|||+||++++. ...|.. +.+.|.+ +|+|+++|+||++.. ...+++..+++.++. ++++++
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~~----------~~~~~~~~~~~~l~~~~~~~lv 72 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITA----------RESIWLPFMETELHCDEKTIII 72 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTTC----------CHHHHHHHHHHTSCCCTTEEEE
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCcc----------cHHHHHHHHHHHhCcCCCEEEE
Confidence 468999999999883 155665 7888887 799999999986421 246677778888887 899999
Q ss_pred EeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhH
Q 024042 127 GTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFF 206 (273)
Q Consensus 127 G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (273)
|||+||.+|+.++.++| ++++|++++........... ..... .. ......
T Consensus 73 G~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~---------~~~~~----------------~~---~~~~~~ 122 (194)
T 2qs9_A 73 GHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDENER---------ASGYF----------------TR---PWQWEK 122 (194)
T ss_dssp EETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHHHH---------HTSTT----------------SS---CCCHHH
T ss_pred EcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhhhH---------HHhhh----------------cc---cccHHH
Confidence 99999999999999998 99999999876532211100 00000 00 011122
Q ss_pred HhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 207 FNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 207 ~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
......|+++++|++|.++|.+..+.+.+.+ +.++++++++||+.+.++|+.+.+.+ +||++.
T Consensus 123 ~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~~-~fl~~~ 185 (194)
T 2qs9_A 123 IKANCPYIVQFGSTDDPFLPWKEQQEVADRL--ETKLHKFTDCGHFQNTEFHELITVVK-SLLKVP 185 (194)
T ss_dssp HHHHCSEEEEEEETTCSSSCHHHHHHHHHHH--TCEEEEESSCTTSCSSCCHHHHHHHH-HHHTCC
T ss_pred HHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc--CCeEEEeCCCCCccchhCHHHHHHHH-HHHHhh
Confidence 3344559999999999999999999999888 78999999999999999999887765 999864
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=173.70 Aligned_cols=170 Identities=13% Similarity=0.130 Sum_probs=139.8
Q ss_pred CCCCeEEEEcCCCCchhHh--HHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC-CccEEEEE
Q 024042 52 LKKPSLVLIHGFGPEAIWQ--WRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG-VERFSVVG 127 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~--~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G 127 (273)
.++|+||++||++++. .. +..+.+.|.+. |.|+++|+||+|.|.......+..+.++++.+.++... .++++++|
T Consensus 2 ~~~~~vv~~HG~~~~~-~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 80 (176)
T 2qjw_A 2 MSRGHCILAHGFESGP-DALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRLQRLLEIARAATEKGPVVLAG 80 (176)
T ss_dssp CSSCEEEEECCTTCCT-TSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGCTTCCHHHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred CCCcEEEEEeCCCCCc-cHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 3578999999999877 54 44788888776 99999999999998865555567777777777777664 57999999
Q ss_pred eccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHH
Q 024042 128 TSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFF 207 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (273)
||+||.+|+.++.++| ++++|+++|......... .
T Consensus 81 ~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~~~-------------------------------------------~ 115 (176)
T 2qjw_A 81 SSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPLPA-------------------------------------------L 115 (176)
T ss_dssp ETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTBCC-------------------------------------------C
T ss_pred ECHHHHHHHHHHHhcC--hhheEEECCcCCccccCc-------------------------------------------c
Confidence 9999999999999988 999999998765431100 2
Q ss_pred hhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 208 NDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 208 ~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
..+..|+++++|++|.++|.+..+.+.+.+ +.+++++ ++||.. .++++++.+.+.+||++
T Consensus 116 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~-~~~H~~-~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 116 DAAAVPISIVHAWHDELIPAADVIAWAQAR--SARLLLV-DDGHRL-GAHVQAASRAFAELLQS 175 (176)
T ss_dssp CCCSSCEEEEEETTCSSSCHHHHHHHHHHH--TCEEEEE-SSCTTC-TTCHHHHHHHHHHHHHT
T ss_pred cccCCCEEEEEcCCCCccCHHHHHHHHHhC--CceEEEe-CCCccc-cccHHHHHHHHHHHHHh
Confidence 233449999999999999999999999887 6888888 799997 47899999999999975
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=194.34 Aligned_cols=239 Identities=13% Similarity=0.135 Sum_probs=157.9
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC-------CCeEEeecCCCCCCCC
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP-------HFNVYVPDLIFFGHST 96 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~-------~~~v~~~d~~g~g~s~ 96 (273)
.+....+++ +|.+++|...+ ...++.++|||+||++++. ..|..+++.|.+ +|+|+++|+||||.|.
T Consensus 84 ~~~~~~~~i-~g~~i~~~~~~----~~~~~~~pllllHG~~~s~-~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~ 157 (408)
T 3g02_A 84 SFPQFTTEI-EGLTIHFAALF----SEREDAVPIALLHGWPGSF-VEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSS 157 (408)
T ss_dssp TSCEEEEEE-TTEEEEEEEEC----CSCTTCEEEEEECCSSCCG-GGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSC
T ss_pred cCCCEEEEE-CCEEEEEEEec----CCCCCCCeEEEECCCCCcH-HHHHHHHHHHhcccccccCceEEEEECCCCCCCCC
Confidence 455666677 99999999986 3345678999999999998 889999998876 3799999999999999
Q ss_pred CCC--ccccHHHHHHHHHHHHHHhCCc-cEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC------CcchHH--
Q 024042 97 TRS--IQRTELFQAASLGKLLEKIGVE-RFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK------RGDNEA-- 165 (273)
Q Consensus 97 ~~~--~~~~~~~~~~~~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------~~~~~~-- 165 (273)
.+. ..++.+.+++++.++++.++.+ +++++|||+||.+++.+|.++|+.+..++.+++..... ......
T Consensus 158 ~~~~~~~~~~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~~~~~~~~~l~~~e~~ 237 (408)
T 3g02_A 158 GPPLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAPPEGPSIESLSAAEKE 237 (408)
T ss_dssp CSCSSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCCTTCCCGGGSCHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCCcccccccCCCHHHHH
Confidence 765 4679999999999999999997 99999999999999999999976444444443332211 000000
Q ss_pred -Hhhhhhh----------------------------------hhhhhccC-CCChHHHHHHhhhh------------hcc
Q 024042 166 -LVKRANL----------------------------------ERIDHLML-PESASQLRTLTGLA------------VSK 197 (273)
Q Consensus 166 -~~~~~~~----------------------------------~~~~~~~~-~~~~~~~~~~~~~~------------~~~ 197 (273)
+...... ..+..+.. ......+....... +..
T Consensus 238 ~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ll~~v~~y~~t~~~~~s~~~y~e 317 (408)
T 3g02_A 238 GIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYRE 317 (408)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTHHHHHGGGHHH
T ss_pred HHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHHHHHHHHHHHhhccchhHHHHHHh
Confidence 0000000 00000000 00001000000000 000
Q ss_pred CCCCChh-------hHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 198 NLDIVPD-------FFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 198 ~~~~~~~-------~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
....... .....+..|++++.|.+|...++....+ ...+.+.+..++++||+.++|+|+.+++.|.+|++
T Consensus 318 ~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p~~~~~---~~~~~~~~~~~~~gGHf~~lE~Pe~~~~~l~~fl~ 394 (408)
T 3g02_A 318 WVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPVPRSWIA---TTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVE 394 (408)
T ss_dssp HTTC-------CTTTTTTCEEEEEEEEECTBSSSCCCHHHHG---GGEEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHH
T ss_pred hcccccccccccccccCCCcCCCEEEEeCCcccccCcHHHHH---hcCCeeEEEECCCCcCchhhhCHHHHHHHHHHHHH
Confidence 0000000 0123456799999999997766653322 22245778899999999999999999999999997
Q ss_pred c
Q 024042 271 G 271 (273)
Q Consensus 271 ~ 271 (273)
+
T Consensus 395 ~ 395 (408)
T 3g02_A 395 Q 395 (408)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=190.40 Aligned_cols=226 Identities=19% Similarity=0.203 Sum_probs=155.4
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-------
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI------- 100 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~------- 100 (273)
.++...+|.+++++.+.|+ ..++.|+||++||++++. ..|..+...+..+|.|+++|+||+|.|.....
T Consensus 85 ~~~~~~~g~~l~~~~~~P~---~~~~~p~vv~~HG~g~~~-~~~~~~~~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~~ 160 (346)
T 3fcy_A 85 LYFTGVRGARIHAKYIKPK---TEGKHPALIRFHGYSSNS-GDWNDKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTL 160 (346)
T ss_dssp EEEECGGGCEEEEEEEEES---CSSCEEEEEEECCTTCCS-CCSGGGHHHHTTTCEEEEECCTTSSSSCCCCCCCSSCCS
T ss_pred EEEEcCCCCEEEEEEEecC---CCCCcCEEEEECCCCCCC-CChhhhhHHHhCCcEEEEEcCCCCCCCCCCCcccCCCCc
Confidence 3445558889998887632 245678999999999888 78888877777779999999999998876432
Q ss_pred -------------cccHHHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc
Q 024042 101 -------------QRTELFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG 161 (273)
Q Consensus 101 -------------~~~~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~ 161 (273)
.+......+|+...++.+ +.++++++|||+||.+|+.++..+|+ ++++|+++|.......
T Consensus 161 ~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~~~ 239 (346)
T 3fcy_A 161 NGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDYKR 239 (346)
T ss_dssp BCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCHHH
T ss_pred CcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCHHH
Confidence 122334455555555544 34789999999999999999999998 9999999886542110
Q ss_pred chHHHhhh---h---hhhhhhhccCC--CChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHH
Q 024042 162 DNEALVKR---A---NLERIDHLMLP--ESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATEL 233 (273)
Q Consensus 162 ~~~~~~~~---~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~ 233 (273)
..... . ....+.....+ ........... .........++..|+|+++|++|.++|.+.++.+
T Consensus 240 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~ 309 (346)
T 3fcy_A 240 ---VWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLG-------YIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAA 309 (346)
T ss_dssp ---HHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHG-------GGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHH
T ss_pred ---HhhccccccchHHHHHHHHhcCCCcchHHHHHHHhC-------cccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHH
Confidence 00000 0 00000000000 01111111100 1123344566677999999999999999999999
Q ss_pred HHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 234 KELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 234 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.+.+..++++++++++||..+ +++.+.+.+||++.
T Consensus 310 ~~~~~~~~~~~~~~~~gH~~~----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 310 YNNIQSKKDIKVYPDYGHEPM----RGFGDLAMQFMLEL 344 (346)
T ss_dssp HTTCCSSEEEEEETTCCSSCC----TTHHHHHHHHHHTT
T ss_pred HHhcCCCcEEEEeCCCCCcCH----HHHHHHHHHHHHHh
Confidence 998844799999999999986 56788899999763
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-28 Score=193.85 Aligned_cols=240 Identities=13% Similarity=0.083 Sum_probs=156.5
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHH--HhhcCCCeEEeecCCCCCCCCCCCcc
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQV--QFFAPHFNVYVPDLIFFGHSTTRSIQ 101 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~--~~l~~~~~v~~~d~~g~g~s~~~~~~ 101 (273)
..+...+.. +|.++..+... .+.++.|+||++||++++. ..|.... ..+..+|.|+++|+||+|.|......
T Consensus 134 ~~~~~~i~~-~~~~l~~~~~~----~~~~~~p~vv~~HG~~~~~-~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~ 207 (405)
T 3fnb_A 134 PLKSIEVPF-EGELLPGYAII----SEDKAQDTLIVVGGGDTSR-EDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLH 207 (405)
T ss_dssp CCEEEEEEE-TTEEEEEEEEC----CSSSCCCEEEEECCSSCCH-HHHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTCC
T ss_pred CcEEEEEeE-CCeEEEEEEEc----CCCCCCCEEEEECCCCCCH-HHHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCCC
Confidence 345556666 67788766554 2344559999999999888 7775544 45566799999999999999643332
Q ss_pred ccHHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhh-----h
Q 024042 102 RTELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE-----R 174 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~-----~ 174 (273)
... +..+++..+++.+.. ++++++|||+||.+++.++..+| +++++|+++|...........+....... .
T Consensus 208 ~~~-~~~~d~~~~~~~l~~~~~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~~~ 285 (405)
T 3fnb_A 208 FEV-DARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFSTALKAPKTILKW 285 (405)
T ss_dssp CCS-CTHHHHHHHHHHCCCSSSCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC------------
T ss_pred CCc-cHHHHHHHHHHHHHhcCCCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhhhhhCcHHHHHH
Confidence 222 346777788888766 79999999999999999999998 89999999987754221100000000000 0
Q ss_pred hhhccCCCChHHHHHHhhhhh-ccCCCC-----------ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cC
Q 024042 175 IDHLMLPESASQLRTLTGLAV-SKNLDI-----------VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GK 239 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~ 239 (273)
.......... .......... ...... .+.....++.+|+|+++|++|.+++.+.++.+.+.+ +.
T Consensus 286 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~ 364 (405)
T 3fnb_A 286 GSKLVTSVNK-VAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGI 364 (405)
T ss_dssp ------CCCH-HHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhhccch-hHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCC
Confidence 0000000000 0000000000 000000 000114566779999999999999999999999888 35
Q ss_pred CcEEEEe---CCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 240 KARLEII---ENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 240 ~~~~~~~---~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+.+++++ +++||....++++.+.+.|.+||++.
T Consensus 365 ~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~ 400 (405)
T 3fnb_A 365 DVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHI 400 (405)
T ss_dssp CEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCccchhccccchHHHHHHHHHHHHHHH
Confidence 6789999 66667777889999999999999865
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=188.65 Aligned_cols=231 Identities=14% Similarity=0.107 Sum_probs=161.5
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC-CCeEEeecCCCCCCC-CCCCcc
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHS-TTRSIQ 101 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s-~~~~~~ 101 (273)
..+...++. +|.++.++.+.++ ..++.|+||++||++++. ..|......|.+ +|.|+++|+||+|.| ......
T Consensus 126 ~~~~v~~~~-dg~~i~~~l~~p~---~~~~~P~vl~~hG~~~~~-~~~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~~~~ 200 (386)
T 2jbw_A 126 PAERHELVV-DGIPMPVYVRIPE---GPGPHPAVIMLGGLESTK-EESFQMENLVLDRGMATATFDGPGQGEMFEYKRIA 200 (386)
T ss_dssp CEEEEEEEE-TTEEEEEEEECCS---SSCCEEEEEEECCSSCCT-TTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSC
T ss_pred CeEEEEEEe-CCEEEEEEEEcCC---CCCCCCEEEEeCCCCccH-HHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCC
Confidence 445556666 8999998877532 225678999999998887 544444666554 499999999999998 333334
Q ss_pred ccHHHHHHHHHHHHHH---hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhc
Q 024042 102 RTELFQAASLGKLLEK---IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHL 178 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~---~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (273)
.+..+.+.++.+++.. ++.++++++|||+||.+++.++.. +++++++|++ +......... . ............
T Consensus 201 ~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~-~-~~~~~~~~~~~~ 276 (386)
T 2jbw_A 201 GDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWD-L-ETPLTKESWKYV 276 (386)
T ss_dssp SCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGG-G-SCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHH-h-ccHHHHHHHHHH
Confidence 5777778888888887 556899999999999999999999 8899999999 7765543211 0 000000000011
Q ss_pred cCCCChHHHH-HHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh-cCCcEEEEeCCCCCCcCcC
Q 024042 179 MLPESASQLR-TLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL-GKKARLEIIENTSHVPQIE 256 (273)
Q Consensus 179 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~ 256 (273)
.......... ..... ..+.....++..|+|+++|++|. ++.+.++.+.+.+ ..+.++++++++||.. .+
T Consensus 277 ~g~~~~~~~~~~~~~~-------~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~~~~~~~~~~~gH~~-~~ 347 (386)
T 2jbw_A 277 SKVDTLEEARLHVHAA-------LETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HN 347 (386)
T ss_dssp TTCSSHHHHHHHHHHH-------TCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GG
T ss_pred hCCCCHHHHHHHHHHh-------CChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCCCcEEEEeCCCCcCC-cc
Confidence 1111111111 11110 12223445667799999999999 9999999999988 5579999999999965 56
Q ss_pred ChhhHHHHHHHHhccc
Q 024042 257 NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 257 ~~~~~~~~i~~fl~~~ 272 (273)
+++++.+.+.+||+++
T Consensus 348 ~~~~~~~~i~~fl~~~ 363 (386)
T 2jbw_A 348 LGIRPRLEMADWLYDV 363 (386)
T ss_dssp GTTHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHh
Confidence 7889999999999865
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-27 Score=172.48 Aligned_cols=197 Identities=14% Similarity=0.080 Sum_probs=147.9
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCC--CCCCeEEEEcCCC---Cch-hHhHHHHHHhhcCC-CeEEeecCCCCCCCC
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKT--LKKPSLVLIHGFG---PEA-IWQWRKQVQFFAPH-FNVYVPDLIFFGHST 96 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~--~~~~~vi~~hG~~---~~~-~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~ 96 (273)
..+..++...+| ++.++.+.| ... +++|+||++||++ ++. ...|..+.+.|.+. |.|+++|+||+|.|.
T Consensus 9 ~~~~~~~~~~~g-~~~~~~~~p---~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~ 84 (220)
T 2fuk_A 9 ESAALTLDGPVG-PLDVAVDLP---EPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSA 84 (220)
T ss_dssp SCEEEEEEETTE-EEEEEEECC---CTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCC
T ss_pred cceEEEEeCCCC-eEEEEEEeC---CCCCccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCC
Confidence 345667777788 676665542 222 4588999999953 221 25578888888876 999999999999998
Q ss_pred CCCccccHHHHHHHHHHHHHHh----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh
Q 024042 97 TRSIQRTELFQAASLGKLLEKI----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL 172 (273)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (273)
..... .....+++.++++.+ +.++++++|||+||.+++.++.++ +++++|++++......
T Consensus 85 ~~~~~--~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~------------ 148 (220)
T 2fuk_A 85 GSFDH--GDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD------------ 148 (220)
T ss_dssp SCCCT--TTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC------------
T ss_pred CCccc--CchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh------------
Confidence 65422 233455555555444 446999999999999999999987 7999999998765432
Q ss_pred hhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCC
Q 024042 173 ERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHV 252 (273)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 252 (273)
... .. ...|+++++|++|.++|.+..+.+.+.+.++.++++++++||.
T Consensus 149 -----------------------~~~---~~------~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 196 (220)
T 2fuk_A 149 -----------------------FSD---VQ------PPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHF 196 (220)
T ss_dssp -----------------------CTT---CC------CCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTT
T ss_pred -----------------------hhh---cc------cCCcEEEEECCCCcccCHHHHHHHHHHhCcCCcEEEeCCCCce
Confidence 000 00 0238999999999999999999999888678999999999999
Q ss_pred cCcCChhhHHHHHHHHhcccC
Q 024042 253 PQIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 253 ~~~~~~~~~~~~i~~fl~~~l 273 (273)
... +++++.+.+.+|+++.+
T Consensus 197 ~~~-~~~~~~~~i~~~l~~~l 216 (220)
T 2fuk_A 197 FHR-KLIDLRGALQHGVRRWL 216 (220)
T ss_dssp CTT-CHHHHHHHHHHHHGGGC
T ss_pred ehh-hHHHHHHHHHHHHHHHh
Confidence 877 48889999999988653
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-28 Score=172.14 Aligned_cols=169 Identities=19% Similarity=0.301 Sum_probs=137.9
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCC-C---eEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEe
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-F---NVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGT 128 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~---~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~ 128 (273)
++|+|||+||++++. ..|..+.+.|.+. | +|+++|+||+|.|.. .+.++.++++.++++.++.++++++||
T Consensus 2 ~~~~vv~~HG~~~~~-~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~----~~~~~~~~~~~~~~~~~~~~~~~lvG~ 76 (181)
T 1isp_A 2 EHNPVVMVHGIGGAS-FNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY----NNGPVLSRFVQKVLDETGAKKVDIVAH 76 (181)
T ss_dssp CCCCEEEECCTTCCG-GGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH----HHHHHHHHHHHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEECCcCCCH-hHHHHHHHHHHHcCCCCccEEEEecCCCCCchh----hhHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 467899999999998 8999999998776 6 799999999998752 467788899999999999899999999
Q ss_pred ccchHHHHHHHHhC--CcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhH
Q 024042 129 SYGGFVAYHMARMW--PERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFF 206 (273)
Q Consensus 129 S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (273)
||||.+++.++.++ |++++++|++++........ . .+. . .
T Consensus 77 S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~---------------~-~~~---------------~-~------ 118 (181)
T 1isp_A 77 SMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGK---------------A-LPG---------------T-D------ 118 (181)
T ss_dssp THHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB---------------C-CCC---------------S-C------
T ss_pred CccHHHHHHHHHhcCCCceEEEEEEEcCcccccccc---------------c-CCC---------------C-C------
Confidence 99999999999988 88999999999875432110 0 000 0 0
Q ss_pred HhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 207 FNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 207 ~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.....|+++++|++|.++|.+.. .+ ++.++++++++||+.+.+++ ++.+.|.+||++.
T Consensus 119 -~~~~~p~l~i~G~~D~~v~~~~~-----~~-~~~~~~~~~~~gH~~~~~~~-~~~~~i~~fl~~~ 176 (181)
T 1isp_A 119 -PNQKILYTSIYSSADMIVMNYLS-----RL-DGARNVQIHGVGHIGLLYSS-QVNSLIKEGLNGG 176 (181)
T ss_dssp -TTCCCEEEEEEETTCSSSCHHHH-----CC-BTSEEEEESSCCTGGGGGCH-HHHHHHHHHHTTT
T ss_pred -CccCCcEEEEecCCCcccccccc-----cC-CCCcceeeccCchHhhccCH-HHHHHHHHHHhcc
Confidence 01123899999999999998843 25 78999999999999988887 7999999999763
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-27 Score=175.28 Aligned_cols=210 Identities=13% Similarity=0.149 Sum_probs=153.2
Q ss_pred CCceeEEecC-CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc
Q 024042 24 GLSSQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ 101 (273)
Q Consensus 24 ~~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~ 101 (273)
+++.+.++++ +|.++.++.+.|+. ..++.|+||++||++++. ..|..+++.|.+. |.|+++|++|+|.+......
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~p~vv~~HG~~g~~-~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~ 79 (241)
T 3f67_A 3 AIIAGETSIPSQGENMPAYHARPKN--ADGPLPIVIVVQEIFGVH-EHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHD 79 (241)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETT--CCSCEEEEEEECCTTCSC-HHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCS
T ss_pred cceeeeEEEecCCcceEEEEecCCC--CCCCCCEEEEEcCcCccC-HHHHHHHHHHHHCCcEEEEecccccCCCCCchhh
Confidence 3444444443 78888877775332 124468999999999888 8899999988766 99999999999877644332
Q ss_pred c-----------cHHHHHHHHHHHHHHhC-----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHH
Q 024042 102 R-----------TELFQAASLGKLLEKIG-----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA 165 (273)
Q Consensus 102 ~-----------~~~~~~~~~~~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~ 165 (273)
. ......+++.++++.+. .++++++|||+||.+++.++.++|+ +.+++++.+........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~~~--- 155 (241)
T 3f67_A 80 IPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEKSL--- 155 (241)
T ss_dssp HHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCCCS---
T ss_pred HHHHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCCcc---
Confidence 1 23456777777777663 4689999999999999999999987 77777766543321100
Q ss_pred HhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcE
Q 024042 166 LVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKAR 242 (273)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~ 242 (273)
.....+.....++..|+++++|++|.++|.+..+.+.+.+ +.+++
T Consensus 156 --------------------------------~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~ 203 (241)
T 3f67_A 156 --------------------------------NSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAE 203 (241)
T ss_dssp --------------------------------SSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEE
T ss_pred --------------------------------CCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcE
Confidence 0011233344555669999999999999999999888887 36899
Q ss_pred EEEeCCCCCCcCcC--------ChhhHHHHHHHHhccc
Q 024042 243 LEIIENTSHVPQIE--------NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 243 ~~~~~~~gH~~~~~--------~~~~~~~~i~~fl~~~ 272 (273)
++++++++|.+..+ ..++..+.+.+||+++
T Consensus 204 ~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 204 IVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp EEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 99999999987642 2356788899999874
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-28 Score=183.20 Aligned_cols=184 Identities=16% Similarity=0.129 Sum_probs=138.3
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHH
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGK 113 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~ 113 (273)
|..++|.... ++++.|+||++||++++. ..|..+++.|.+. |.|+++|+||+|.+.... ..+.....+.+.+
T Consensus 40 ~~~l~~p~~~-----~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~-~~d~~~~~~~l~~ 112 (262)
T 1jfr_A 40 GGTIYYPTST-----ADGTFGAVVISPGFTAYQ-SSIAWLGPRLASQGFVVFTIDTNTTLDQPDSR-GRQLLSALDYLTQ 112 (262)
T ss_dssp CEEEEEESCC-----TTCCEEEEEEECCTTCCG-GGTTTHHHHHHTTTCEEEEECCSSTTCCHHHH-HHHHHHHHHHHHH
T ss_pred ceeEEecCCC-----CCCCCCEEEEeCCcCCCc-hhHHHHHHHHHhCCCEEEEeCCCCCCCCCchh-HHHHHHHHHHHHh
Confidence 3566665542 135678999999999998 8899899999776 999999999998754210 0111111222221
Q ss_pred ---HHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHH
Q 024042 114 ---LLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTL 190 (273)
Q Consensus 114 ---~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (273)
++..++.++++++|||+||.+++.++.++|+ ++++|++++...
T Consensus 113 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~--------------------------------- 158 (262)
T 1jfr_A 113 RSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT--------------------------------- 158 (262)
T ss_dssp TSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS---------------------------------
T ss_pred ccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc---------------------------------
Confidence 1123355789999999999999999999987 999999987532
Q ss_pred hhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHH-HHHHHHHhc--CCcEEEEeCCCCCCcCcCChhhHHHHHHH
Q 024042 191 TGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKM-ATELKELLG--KKARLEIIENTSHVPQIENPGLFNSIVKN 267 (273)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~-~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 267 (273)
.....++..|+++++|++|.+++.+. .+.+.+.+. .+.++++++++||..+.++++++.+.+.+
T Consensus 159 -------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~ 225 (262)
T 1jfr_A 159 -------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSIS 225 (262)
T ss_dssp -------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHH
T ss_pred -------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEeCCCCcCCcccchHHHHHHHHH
Confidence 00112234599999999999999998 999999982 24599999999999999999999999999
Q ss_pred Hhccc
Q 024042 268 FLRGS 272 (273)
Q Consensus 268 fl~~~ 272 (273)
||++.
T Consensus 226 fl~~~ 230 (262)
T 1jfr_A 226 WLKRF 230 (262)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=191.19 Aligned_cols=227 Identities=15% Similarity=0.146 Sum_probs=148.4
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHH----------------HHHHhhcCC-CeEEeecCCCCCCCC
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWR----------------KQVQFFAPH-FNVYVPDLIFFGHST 96 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~----------------~~~~~l~~~-~~v~~~d~~g~g~s~ 96 (273)
+|..+.|.... .+++|+||++||++++. ..|. .+++.|.+. |+|+++|+||+|.|.
T Consensus 36 ~~~~~~~~~~~------~~~~~~vv~~hG~~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 108 (354)
T 2rau_A 36 DIISLHKVNLI------GGGNDAVLILPGTWSSG-EQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPP 108 (354)
T ss_dssp CEEEEEEEEET------TCCEEEEEEECCTTCCH-HHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCT
T ss_pred CceEEEeeccc------CCCCCEEEEECCCCCCc-cccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCC
Confidence 56677776654 34678999999999988 7555 788888776 999999999999998
Q ss_pred CCCc-------cccHHHHHHHHHHHHHH----hCCccEEEEEeccchHHHHHHHHhC-CcccceEEEecCCCCCCCcc--
Q 024042 97 TRSI-------QRTELFQAASLGKLLEK----IGVERFSVVGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKRGD-- 162 (273)
Q Consensus 97 ~~~~-------~~~~~~~~~~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~a~~~-~~~v~~~v~~~~~~~~~~~~-- 162 (273)
.... .++..+.++++.++++. ++.++++++|||+||.+|+.++.++ |++++++|++++........
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~ 188 (354)
T 2rau_A 109 FLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPK 188 (354)
T ss_dssp TCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--
T ss_pred cccccccccccCCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccc
Confidence 6553 45678888888888877 4778999999999999999999999 99999999997654321000
Q ss_pred --------hHHHhhhh--------h------h-hhhhhccCC------CChHHHHH-HhhhhhccC----CC--------
Q 024042 163 --------NEALVKRA--------N------L-ERIDHLMLP------ESASQLRT-LTGLAVSKN----LD-------- 200 (273)
Q Consensus 163 --------~~~~~~~~--------~------~-~~~~~~~~~------~~~~~~~~-~~~~~~~~~----~~-------- 200 (273)
...+.... . . ......... .....+.. ......... ..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (354)
T 2rau_A 189 FYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPI 268 (354)
T ss_dssp CCCCSCSSHHHHHHHTCCEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHH
T ss_pred hhhhhhhhHHHhhhhcccccCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCCCccHHHHHHH
Confidence 01111000 0 0 000000000 00000000 000000000 00
Q ss_pred ---------------CChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCCh---hhHH
Q 024042 201 ---------------IVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP---GLFN 262 (273)
Q Consensus 201 ---------------~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~ 262 (273)
......+.++..|+|+++|++|.++|. ..+ .+.+++++++++++||+.+.+++ +++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~-~~~----~l~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 343 (354)
T 2rau_A 269 LASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQIF-DSK----ILPSNSEIILLKGYGHLDVYTGENSEKDVN 343 (354)
T ss_dssp HHTSCSEEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHHB-CGG----GSCTTCEEEEETTCCGGGGTSSTTHHHHTH
T ss_pred HhhhccccccccccCcccccccccCCCCEEEEecCCCCCCcc-chh----hhccCceEEEcCCCCCchhhcCCCcHHHHH
Confidence 000111235667999999999987653 222 22378899999999999877665 8999
Q ss_pred HHHHHHhccc
Q 024042 263 SIVKNFLRGS 272 (273)
Q Consensus 263 ~~i~~fl~~~ 272 (273)
+.|.+||++.
T Consensus 344 ~~i~~fl~~~ 353 (354)
T 2rau_A 344 SVVLKWLSQQ 353 (354)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999999763
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-27 Score=178.53 Aligned_cols=222 Identities=13% Similarity=0.127 Sum_probs=149.2
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~ 100 (273)
++...+...+|.++.++...+......++.|+||++||.+ ++. ..|..++..|.+. |.|+++|+||+|.|.....
T Consensus 14 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~ 92 (276)
T 3hxk_A 14 MNKSTFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQ-RESDPLALAFLAQGYQVLLLNYTVMNKGTNYNF 92 (276)
T ss_dssp -CEEECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCG-GGSHHHHHHHHHTTCEEEEEECCCTTSCCCSCT
T ss_pred cccccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCc-hhhHHHHHHHHHCCCEEEEecCccCCCcCCCCc
Confidence 3446666778999998887532211226679999999943 444 6788888888766 9999999999998764322
Q ss_pred cccHHHHHHHHHHHHH---Hh------CCccEEEEEeccchHHHHHHHHh-CCcccceEEEecCCCCCCCcchHHHhhhh
Q 024042 101 QRTELFQAASLGKLLE---KI------GVERFSVVGTSYGGFVAYHMARM-WPERVEKVVIASSGVNMKRGDNEALVKRA 170 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~---~~------~~~~i~l~G~S~Gg~~a~~~a~~-~~~~v~~~v~~~~~~~~~~~~~~~~~~~~ 170 (273)
. ....+++...++ .. +.++++++|||+||.+|+.++.+ .+.+++++|+++|.........
T Consensus 93 ~---~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~------- 162 (276)
T 3hxk_A 93 L---SQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWP------- 162 (276)
T ss_dssp H---HHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCS-------
T ss_pred C---chHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCC-------
Confidence 2 222333333222 21 34689999999999999999998 7889999999998776433210
Q ss_pred hhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeC
Q 024042 171 NLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIE 247 (273)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~ 247 (273)
........+ .... ....+.....++..|+++++|++|.++|.+.++.+.+.+ +.++++++++
T Consensus 163 ~~~~~~~~~-~~~~--------------~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~ 227 (276)
T 3hxk_A 163 SDLSHFNFE-IENI--------------SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFE 227 (276)
T ss_dssp SSSSSSCCC-CSCC--------------GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEES
T ss_pred cchhhhhcC-chhh--------------hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEEC
Confidence 000001111 0000 011122223345569999999999999999999988887 2456999999
Q ss_pred CCCCCcCcCCh-------------hhHHHHHHHHhccc
Q 024042 248 NTSHVPQIENP-------------GLFNSIVKNFLRGS 272 (273)
Q Consensus 248 ~~gH~~~~~~~-------------~~~~~~i~~fl~~~ 272 (273)
++||.+....+ +++.+.+.+||+++
T Consensus 228 ~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~ 265 (276)
T 3hxk_A 228 SGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQ 265 (276)
T ss_dssp CCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHH
T ss_pred CCCCCccccCccccccccccCchHHHHHHHHHHHHHhC
Confidence 99997765444 67888889999864
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-27 Score=174.79 Aligned_cols=177 Identities=18% Similarity=0.248 Sum_probs=136.9
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEee-------------------cCCCCCCCCCCCccccHHHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVP-------------------DLIFFGHSTTRSIQRTELFQAAS 110 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~-------------------d~~g~g~s~~~~~~~~~~~~~~~ 110 (273)
.++.|+||++||++++. ..|..+...|.+. |.|+++ |++|+ .+.......+.++.+++
T Consensus 20 ~~~~~~vv~lHG~~~~~-~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~~~~~~~~~~~~~ 97 (232)
T 1fj2_A 20 RKATAAVIFLHGLGDTG-HGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQEDESGIKQAAEN 97 (232)
T ss_dssp SCCSEEEEEECCSSSCH-HHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCCBCHHHHHHHHHH
T ss_pred CCCCceEEEEecCCCcc-chHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-CcccccccHHHHHHHHH
Confidence 45678999999999998 8899999999874 999997 77777 33334445678888889
Q ss_pred HHHHHHHh---CC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChH
Q 024042 111 LGKLLEKI---GV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESAS 185 (273)
Q Consensus 111 ~~~~~~~~---~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (273)
+.++++.+ +. ++++++|||+||.+|+.++.++|++++++|++++........ +.
T Consensus 98 ~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~------------------~~--- 156 (232)
T 1fj2_A 98 IKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF------------------PQ--- 156 (232)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS------------------CS---
T ss_pred HHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccc------------------cc---
Confidence 99988886 54 799999999999999999999999999999999876542110 00
Q ss_pred HHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-----CCcEEEEeCCCCCCcCcCChhh
Q 024042 186 QLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-----KKARLEIIENTSHVPQIENPGL 260 (273)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~~ 260 (273)
.......+..|+++++|++|.+++.+..+.+.+.+. ++.++++++++||..+.+..
T Consensus 157 -----------------~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~-- 217 (232)
T 1fj2_A 157 -----------------GPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEM-- 217 (232)
T ss_dssp -----------------SCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHH--
T ss_pred -----------------cccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccCHHHH--
Confidence 000122344599999999999999998888887772 45899999999999854443
Q ss_pred HHHHHHHHhcc
Q 024042 261 FNSIVKNFLRG 271 (273)
Q Consensus 261 ~~~~i~~fl~~ 271 (273)
+.+.+||++
T Consensus 218 --~~i~~~l~~ 226 (232)
T 1fj2_A 218 --MDVKQFIDK 226 (232)
T ss_dssp --HHHHHHHHH
T ss_pred --HHHHHHHHH
Confidence 455555554
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-27 Score=167.67 Aligned_cols=179 Identities=11% Similarity=0.139 Sum_probs=137.0
Q ss_pred CCCeEEEEcCCCCchhH-hHHHHHH-hhc-CCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEec
Q 024042 53 KKPSLVLIHGFGPEAIW-QWRKQVQ-FFA-PHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTS 129 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~-~~~~~~~-~l~-~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S 129 (273)
+.|+||++||++++. . .|..... .|. ++|.|+++|+| .+.. .+..++++++.++++.+ .++++++|||
T Consensus 3 g~p~vv~~HG~~~~~-~~~~~~~~~~~l~~~g~~v~~~d~~---~~~~----~~~~~~~~~~~~~~~~~-~~~~~l~G~S 73 (192)
T 1uxo_A 3 GTKQVYIIHGYRASS-TNHWFPWLKKRLLADGVQADILNMP---NPLQ----PRLEDWLDTLSLYQHTL-HENTYLVAHS 73 (192)
T ss_dssp -CCEEEEECCTTCCT-TSTTHHHHHHHHHHTTCEEEEECCS---CTTS----CCHHHHHHHHHTTGGGC-CTTEEEEEET
T ss_pred CCCEEEEEcCCCCCc-chhHHHHHHHHHHhCCcEEEEecCC---CCCC----CCHHHHHHHHHHHHHhc-cCCEEEEEeC
Confidence 356799999999988 6 7877774 674 56999999999 2221 26788888888888887 7899999999
Q ss_pred cchHHHHHHHHhCCc--ccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHH
Q 024042 130 YGGFVAYHMARMWPE--RVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFF 207 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (273)
+||.+++.++.++|+ +++++|++++......... .... +... . ......
T Consensus 74 ~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~----------~~~~-----------------~~~~-~-~~~~~~ 124 (192)
T 1uxo_A 74 LGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQ----------MLDE-----------------FTQG-S-FDHQKI 124 (192)
T ss_dssp THHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCG----------GGGG-----------------GTCS-C-CCHHHH
T ss_pred ccHHHHHHHHHHhcccCCccEEEEeccCCCccccch----------hhhh-----------------hhhc-C-CCHHHH
Confidence 999999999999999 9999999998765432110 0000 0000 0 112344
Q ss_pred hhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhh---HHHHHHHHhcc
Q 024042 208 NDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGL---FNSIVKNFLRG 271 (273)
Q Consensus 208 ~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~---~~~~i~~fl~~ 271 (273)
.++..|+++++|++|.++|.+..+.+.+.+ +.++++++++||+.+.+++++ +.+.+.+|+++
T Consensus 125 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 125 IESAKHRAVIASKDDQIVPFSFSKDLAQQI--DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp HHHEEEEEEEEETTCSSSCHHHHHHHHHHT--TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred HhhcCCEEEEecCCCCcCCHHHHHHHHHhc--CceEEEeCCCcCcccccccccHHHHHHHHHHHHHH
Confidence 566679999999999999999999999888 789999999999998887744 57777788765
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=181.81 Aligned_cols=223 Identities=14% Similarity=0.151 Sum_probs=146.0
Q ss_pred ceeEEecCCcceEEeecCCccCCC---CCCCCCeEEEEcCCC---CchhHhHHHHHHhhcCC-CeEEeecCCCCCCC--C
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDH---KTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHS--T 96 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~---~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s--~ 96 (273)
+...+...+|..+.+..+ ++.+. ..++.|+||++||.+ ++. ..|..++..|.+. |.|+++|+||+|.+ .
T Consensus 20 ~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~~~~~~~ 97 (283)
T 3bjr_A 20 MQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPV-AQAESLAMAFAGHGYQAFYLEYTLLTDQQPL 97 (283)
T ss_dssp SEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCH-HHHHHHHHHHHTTTCEEEEEECCCTTTCSSC
T ss_pred cceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCc-cccHHHHHHHHhCCcEEEEEeccCCCccccC
Confidence 344444447766655555 32211 345678999999944 444 7788899999876 99999999999987 3
Q ss_pred CCCccccHHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCcc-------------cceEEEecCCCCCCCc
Q 024042 97 TRSIQRTELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPER-------------VEKVVIASSGVNMKRG 161 (273)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~-------------v~~~v~~~~~~~~~~~ 161 (273)
.+....+....++.+.+..+.++. ++++++|||+||.+|+.++.++|++ ++++++++|.......
T Consensus 98 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~ 177 (283)
T 3bjr_A 98 GLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLG 177 (283)
T ss_dssp BTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSB
T ss_pred chhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccc
Confidence 222222333333444444444444 5899999999999999999999876 9999999887654322
Q ss_pred chHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---c
Q 024042 162 DNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---G 238 (273)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~ 238 (273)
..... ......+ . ......+.....++..|+|+++|++|.++|.+.++.+.+.+ +
T Consensus 178 ~~~~~------~~~~~~~-~---------------~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g 235 (283)
T 3bjr_A 178 FPKDD------ATLATWT-P---------------TPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAK 235 (283)
T ss_dssp C--------------CCC-C---------------CGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTT
T ss_pred ccccc------chHHHHH-H---------------HhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCC
Confidence 11000 0000000 0 00011122223345569999999999999999999888887 2
Q ss_pred CCcEEEEeCCCCCCcCcCCh-------------hhHHHHHHHHhccc
Q 024042 239 KKARLEIIENTSHVPQIENP-------------GLFNSIVKNFLRGS 272 (273)
Q Consensus 239 ~~~~~~~~~~~gH~~~~~~~-------------~~~~~~i~~fl~~~ 272 (273)
.++++++++++||.+..+.+ +++.+.+.+||+++
T Consensus 236 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 236 IPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp CCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred CCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 35799999999997655543 68889999999764
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.6e-27 Score=176.13 Aligned_cols=221 Identities=9% Similarity=0.090 Sum_probs=139.0
Q ss_pred eeEEec-CCcceEEeecCCccCC---CCCCCCCeEEEEcC---CCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCC
Q 024042 27 SQTIDI-DDETTLHFWGPKLEDD---HKTLKKPSLVLIHG---FGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTR 98 (273)
Q Consensus 27 ~~~~~~-~~g~~l~~~~~~~~~~---~~~~~~~~vi~~hG---~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~ 98 (273)
.+.+++ .+|..+.+..+.|+.. ...++.|+||++|| .+++. ..|..++..|.+. |.|+++|+||+|.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~- 81 (277)
T 3bxp_A 4 VEQRTLNTAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSG-REEAPIATRMMAAGMHTVVLNYQLIVGDQS- 81 (277)
T ss_dssp EEEEEECSTTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCC-TTHHHHHHHHHHTTCEEEEEECCCSTTTCC-
T ss_pred eEEEEeccCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCC-ccchHHHHHHHHCCCEEEEEecccCCCCCc-
Confidence 334444 2666666655543211 12456789999999 45565 7788888888765 9999999999884433
Q ss_pred CccccHHHHHHHHHHH---HHHhC--CccEEEEEeccchHHHHHHHHhC--------------CcccceEEEecCCCCCC
Q 024042 99 SIQRTELFQAASLGKL---LEKIG--VERFSVVGTSYGGFVAYHMARMW--------------PERVEKVVIASSGVNMK 159 (273)
Q Consensus 99 ~~~~~~~~~~~~~~~~---~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~--------------~~~v~~~v~~~~~~~~~ 159 (273)
.......+..+.+..+ .+.++ .++++++|||+||.+|+.++.++ +.+++++|+++|.....
T Consensus 82 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~ 161 (277)
T 3bxp_A 82 VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLT 161 (277)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTT
T ss_pred cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCC
Confidence 2222233333333322 23333 36899999999999999999985 67899999999876543
Q ss_pred CcchHHHhhhhhhhhhhhccCCCChHHHH-HHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh-
Q 024042 160 RGDNEALVKRANLERIDHLMLPESASQLR-TLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL- 237 (273)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~- 237 (273)
..... . .... .... ......+.........|+|+++|++|.++|.+.++.+.+.+
T Consensus 162 ~~~~~------------------~-~~~~~~~~~----~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~ 218 (277)
T 3bxp_A 162 AGFPT------------------T-SAARNQITT----DARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAML 218 (277)
T ss_dssp SSSSS------------------S-HHHHHHHCS----CGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHH
T ss_pred CCCCC------------------c-cccchhccc----hhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHH
Confidence 21100 0 0000 1000 00011222233344559999999999999999888888876
Q ss_pred --cCCcEEEEeCCCCCCcCcCC---------------hhhHHHHHHHHhccc
Q 024042 238 --GKKARLEIIENTSHVPQIEN---------------PGLFNSIVKNFLRGS 272 (273)
Q Consensus 238 --~~~~~~~~~~~~gH~~~~~~---------------~~~~~~~i~~fl~~~ 272 (273)
+.+++++++++++|.+.... .+++.+.+.+||+++
T Consensus 219 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 270 (277)
T 3bxp_A 219 QHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQ 270 (277)
T ss_dssp HTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHT
T ss_pred HCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhc
Confidence 35679999999999654433 467888889999764
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=7e-27 Score=183.58 Aligned_cols=241 Identities=16% Similarity=0.116 Sum_probs=155.6
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH-HHHhhcCC-CeEEeecCCCCCCCCCCCccc-cH
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK-QVQFFAPH-FNVYVPDLIFFGHSTTRSIQR-TE 104 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~-~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~-~~ 104 (273)
..+...||.+++++.+.|+. ...++.|+||++||++++. ..|.. +...|.+. |.|+++|+||+|.|....... ..
T Consensus 71 ~~~~~~~g~~~~~~~~~p~~-~~~~~~p~vv~~hG~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~ 148 (367)
T 2hdw_A 71 VTFANRYGITLAADLYLPKN-RGGDRLPAIVIGGPFGAVK-EQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASP 148 (367)
T ss_dssp EEEECTTSCEEEEEEEEESS-CCSSCEEEEEEECCTTCCT-TSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSSSSCCCH
T ss_pred EEEecCCCCEEEEEEEeCCC-CCCCCCCEEEEECCCCCcc-hhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcCccccch
Confidence 34455578888887765332 1134568999999999887 66764 77777766 999999999999988654433 34
Q ss_pred HHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC-------Ccc-hH---HHh
Q 024042 105 LFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK-------RGD-NE---ALV 167 (273)
Q Consensus 105 ~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~-------~~~-~~---~~~ 167 (273)
....+++.++++.+ +.++++++|||+||.+++.++.++| +++++|+++|..... ... .. ...
T Consensus 149 ~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 227 (367)
T 2hdw_A 149 DINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSKGYNDSVTLEQRTRTL 227 (367)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHHTTTTCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhhhhccccchHHHHHHH
Confidence 55666666666655 2468999999999999999999998 599999998652110 000 00 000
Q ss_pred hhhhhhh---hhhc-c-----C----CCChHHHHHHhhhhhc----cC-----------------CCCChhhHHhhhh-c
Q 024042 168 KRANLER---IDHL-M-----L----PESASQLRTLTGLAVS----KN-----------------LDIVPDFFFNDFV-H 212 (273)
Q Consensus 168 ~~~~~~~---~~~~-~-----~----~~~~~~~~~~~~~~~~----~~-----------------~~~~~~~~~~~~~-~ 212 (273)
....... .... . . ................ .. ....+.....++. .
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 307 (367)
T 2hdw_A 228 EQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYIKEISPR 307 (367)
T ss_dssp HHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTSCSCTTGGGGTTS
T ss_pred HHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCCChhHhHHhhcCC
Confidence 0000000 0000 0 0 0011111111110000 00 0112233456777 8
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhh-HHHHHHHHhcccC
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGL-FNSIVKNFLRGSL 273 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~-~~~~i~~fl~~~l 273 (273)
|+|+++|++|. +.+..+.+.+..++++++++++++||+.+.+.++. +.+.+.+||+++|
T Consensus 308 PvLii~G~~D~--~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 308 PILLIHGERAH--SRYFSETAYAAAAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL 367 (367)
T ss_dssp CEEEEEETTCT--THHHHHHHHHHSCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHHC
T ss_pred ceEEEecCCCC--CHHHHHHHHHhCCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhhC
Confidence 99999999998 78888888887657899999999999977776665 5899999998765
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.95 E-value=8.1e-28 Score=176.37 Aligned_cols=194 Identities=18% Similarity=0.163 Sum_probs=143.1
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEee--cCCCCCCCCCCC---
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVP--DLIFFGHSTTRS--- 99 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~--d~~g~g~s~~~~--- 99 (273)
.+..+++. +|.+++|+..+ . .++.|+||++||++++. ..|..+...|+++|.|+++ |++|+|.|....
T Consensus 15 ~~e~~~~~-~~~~~~~~~~~----~-~~~~~~vv~~HG~~~~~-~~~~~~~~~l~~g~~v~~~~~d~~g~g~s~~~~~~~ 87 (226)
T 2h1i_A 15 TENLYFQS-NAMMKHVFQKG----K-DTSKPVLLLLHGTGGNE-LDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLA 87 (226)
T ss_dssp CCCHHHHH-HSSSCEEEECC----S-CTTSCEEEEECCTTCCT-TTTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEE
T ss_pred ceeeeecC-CCceeEEecCC----C-CCCCcEEEEEecCCCCh-hHHHHHHHHhccCceEEEecCcccCCcchhhccccC
Confidence 34445555 78889988875 1 25789999999999998 8899999999889999999 899999875321
Q ss_pred -ccccHHHH---HHHHHHHH----HHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhh
Q 024042 100 -IQRTELFQ---AASLGKLL----EKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169 (273)
Q Consensus 100 -~~~~~~~~---~~~~~~~~----~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~ 169 (273)
...+.... ++++.+++ +.. +.++++++|||+||.+|+.++..+|++++++|++++.......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~-------- 159 (226)
T 2h1i_A 88 EGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGM-------- 159 (226)
T ss_dssp TTEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSC--------
T ss_pred ccCcChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCcc--------
Confidence 12233333 33333333 344 4489999999999999999999999999999999987654310
Q ss_pred hhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc---CCcEEEEe
Q 024042 170 ANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG---KKARLEII 246 (273)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~ 246 (273)
. .......|+++++|++|.+++.+..+.+.+.+. .+.++ ++
T Consensus 160 ----------------------------~-------~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~ 203 (226)
T 2h1i_A 160 ----------------------------Q-------LANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HW 203 (226)
T ss_dssp ----------------------------C-------CCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EE
T ss_pred ----------------------------c-------cccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-Ee
Confidence 0 001123499999999999999999999988883 14555 89
Q ss_pred CCCCCCcCcCChhhHHHHHHHHhcccC
Q 024042 247 ENTSHVPQIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 247 ~~~gH~~~~~~~~~~~~~i~~fl~~~l 273 (273)
+++||.... +..+.+.+||++.|
T Consensus 204 ~~~gH~~~~----~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 204 ENRGHQLTM----GEVEKAKEWYDKAF 226 (226)
T ss_dssp ESSTTSCCH----HHHHHHHHHHHHHC
T ss_pred CCCCCCCCH----HHHHHHHHHHHHhC
Confidence 999999853 44566777776643
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-26 Score=176.50 Aligned_cols=227 Identities=16% Similarity=0.070 Sum_probs=147.8
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCc-hhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-------
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPE-AIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI------- 100 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~-~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~------- 100 (273)
++...+|.++.++.+.|+ ..++.|+||++||++++ . ..|.........+|.|+++|+||+|.|.....
T Consensus 60 ~~~~~~g~~i~~~~~~P~---~~~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~~ 135 (318)
T 1l7a_A 60 TYKSFGNARITGWYAVPD---KEGPHPAIVKYHGYNASYD-GEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHAL 135 (318)
T ss_dssp EEEEGGGEEEEEEEEEES---SCSCEEEEEEECCTTCCSG-GGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSS
T ss_pred EEEccCCCEEEEEEEeeC---CCCCccEEEEEcCCCCCCC-CCcccccchhhCCcEEEEecCCCCCCCCCcccccCCccc
Confidence 344457888887777532 13567899999999998 7 77777665555569999999999999875521
Q ss_pred -----------cccHHHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch
Q 024042 101 -----------QRTELFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN 163 (273)
Q Consensus 101 -----------~~~~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~ 163 (273)
.+......+|+.++++.+ +.++++++|||+||.+|+.++..+|+ +.++++++|.....
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~---- 210 (318)
T 1l7a_A 136 GWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNF---- 210 (318)
T ss_dssp SSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCH----
T ss_pred cceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCH----
Confidence 112345566666666554 22789999999999999999999876 88888877754321
Q ss_pred HHHhhhhh---hhhhhhccCCC-ChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcC
Q 024042 164 EALVKRAN---LERIDHLMLPE-SASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGK 239 (273)
Q Consensus 164 ~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~ 239 (273)
........ ........... ............ ....+.....++..|+++++|++|.++|.+..+.+.+.+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~ 286 (318)
T 1l7a_A 211 ERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTL----SYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET 286 (318)
T ss_dssp HHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHH----HTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS
T ss_pred HHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhh----ccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCC
Confidence 11100000 00000000000 011111111100 01123344556677999999999999999999999999944
Q ss_pred CcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 240 KARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 240 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
++++++++++||.. ..+..+.+.+||++.
T Consensus 287 ~~~~~~~~~~~H~~----~~~~~~~~~~fl~~~ 315 (318)
T 1l7a_A 287 KKELKVYRYFGHEY----IPAFQTEKLAFFKQI 315 (318)
T ss_dssp SEEEEEETTCCSSC----CHHHHHHHHHHHHHH
T ss_pred CeeEEEccCCCCCC----cchhHHHHHHHHHHH
Confidence 58999999999993 345677777887654
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-27 Score=175.17 Aligned_cols=173 Identities=20% Similarity=0.217 Sum_probs=130.7
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEee--cCCCCCCCCCCC----cc---ccHHHHHHHHHHHHHHh---
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVP--DLIFFGHSTTRS----IQ---RTELFQAASLGKLLEKI--- 118 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~--d~~g~g~s~~~~----~~---~~~~~~~~~~~~~~~~~--- 118 (273)
.++.|+||++||++++. ..|..+++.|+++|.|+++ |++|+|.|.... .. .+....++++.++++.+
T Consensus 59 ~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 137 (251)
T 2r8b_A 59 VAGAPLFVLLHGTGGDE-NQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREH 137 (251)
T ss_dssp CTTSCEEEEECCTTCCH-HHHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEeCCCCCH-hHHHHHHHhcCCCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 35789999999999998 8999999999888999999 899998775321 11 12333345555555443
Q ss_pred -CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhcc
Q 024042 119 -GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSK 197 (273)
Q Consensus 119 -~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (273)
+.++++++|||+||.+|+.++.++|++++++|++++...... .
T Consensus 138 ~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~------------------------------------~ 181 (251)
T 2r8b_A 138 YQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP------------------------------------K 181 (251)
T ss_dssp HTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC------------------------------------C
T ss_pred cCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc------------------------------------c
Confidence 789999999999999999999999999999999998765431 0
Q ss_pred CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcC--CcEEE-EeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 198 NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGK--KARLE-IIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 198 ~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~-~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
. .......|+++++|++|.+++.+..+.+.+.+ + +.++. .++++||.++.+.++ .+.+||++.
T Consensus 182 ~-------~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~gH~~~~~~~~----~~~~~l~~~ 247 (251)
T 2r8b_A 182 I-------SPAKPTRRVLITAGERDPICPVQLTKALEESL-KAQGGTVETVWHPGGHEIRSGEID----AVRGFLAAY 247 (251)
T ss_dssp C-------CCCCTTCEEEEEEETTCTTSCHHHHHHHHHHH-HHHSSEEEEEEESSCSSCCHHHHH----HHHHHHGGG
T ss_pred c-------cccccCCcEEEeccCCCccCCHHHHHHHHHHH-HHcCCeEEEEecCCCCccCHHHHH----HHHHHHHHh
Confidence 0 00112349999999999999999999999988 4 45554 777899998665554 455566554
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.2e-27 Score=178.88 Aligned_cols=235 Identities=15% Similarity=0.100 Sum_probs=148.7
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCcc
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQ 101 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~ 101 (273)
..++...+| ++.++.+.+ ....+.|+||++||++ ++. ..|..+...|++ ++.|+++|+||+|.+..+...
T Consensus 50 ~~~i~~~~g-~i~~~~~~p---~~~~~~p~vv~~HGgg~~~g~~-~~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~~~~ 124 (311)
T 2c7b_A 50 DVHIPVSGG-SIRARVYFP---KKAAGLPAVLYYHGGGFVFGSI-ETHDHICRRLSRLSDSVVVSVDYRLAPEYKFPTAV 124 (311)
T ss_dssp EEEEEETTE-EEEEEEEES---SSCSSEEEEEEECCSTTTSCCT-GGGHHHHHHHHHHHTCEEEEECCCCTTTSCTTHHH
T ss_pred EEEecCCCC-cEEEEEEec---CCCCCCcEEEEECCCcccCCCh-hhhHHHHHHHHHhcCCEEEEecCCCCCCCCCCccH
Confidence 344555466 676665542 1223468999999988 777 888999888876 599999999999998765544
Q ss_pred ccHHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCc----ccceEEEecCCCCCCCcchHHHhhhhhhhhh
Q 024042 102 RTELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPE----RVEKVVIASSGVNMKRGDNEALVKRANLERI 175 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (273)
.+....++++.+.++.++. ++++++|||+||.+|+.++.++++ +++++|+++|................. .
T Consensus 125 ~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~---~ 201 (311)
T 2c7b_A 125 EDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASLVEFGV---A 201 (311)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHHHHHHH---C
T ss_pred HHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCCccHHH---h
Confidence 4555666666666666666 689999999999999999988776 499999999987642211111110000 0
Q ss_pred hhccCCCChHHHHHHhhhhhccC-----CCCChhh-HHhhhhccEEEEecCCCCCCChHHH--HHHHHHhcCCcEEEEeC
Q 024042 176 DHLMLPESASQLRTLTGLAVSKN-----LDIVPDF-FFNDFVHDVLIVWGDQDQIFPLKMA--TELKELLGKKARLEIIE 247 (273)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~p~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~ 247 (273)
... .................. ....+.. ....+ .|+++++|++|.+++.... +.+.+. +.++++++++
T Consensus 202 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~lii~G~~D~~~~~~~~~~~~l~~~-g~~~~~~~~~ 277 (311)
T 2c7b_A 202 ETT--SLPIELMVWFGRQYLKRPEEAYDFKASPLLADLGGL-PPALVVTAEYDPLRDEGELYAYKMKAS-GSRAVAVRFA 277 (311)
T ss_dssp TTC--SSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCTTC-CCEEEEEETTCTTHHHHHHHHHHHHHT-TCCEEEEEET
T ss_pred ccC--CCCHHHHHHHHHHhCCCCccccCcccCcccccccCC-CcceEEEcCCCCchHHHHHHHHHHHHC-CCCEEEEEeC
Confidence 000 011111111111110000 0001110 11122 2999999999999864322 223322 4789999999
Q ss_pred CCCCCcC-----cCChhhHHHHHHHHhcccC
Q 024042 248 NTSHVPQ-----IENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 248 ~~gH~~~-----~~~~~~~~~~i~~fl~~~l 273 (273)
+++|.+. .+.++++.+.+.+||++.+
T Consensus 278 g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (311)
T 2c7b_A 278 GMVHGFVSFYPFVDAGREALDLAAASIRSGL 308 (311)
T ss_dssp TCCTTGGGGTTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCccccccccccCHHHHHHHHHHHHHHHHHh
Confidence 9999875 3455788899999998653
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-27 Score=175.75 Aligned_cols=215 Identities=14% Similarity=0.135 Sum_probs=146.0
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC-CccEEEEEec
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG-VERFSVVGTS 129 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S 129 (273)
.+.+++|||+||++++. ..|..+.+ |.++|+|+++|+||++.+.. ...+.++.++++.+.++.+. .++++++|||
T Consensus 18 ~~~~~~lv~lhg~~~~~-~~~~~~~~-l~~~~~v~~~d~~G~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~l~GhS 93 (265)
T 3ils_A 18 MVARKTLFMLPDGGGSA-FSYASLPR-LKSDTAVVGLNCPYARDPEN--MNCTHGAMIESFCNEIRRRQPRGPYHLGGWS 93 (265)
T ss_dssp TTSSEEEEEECCTTCCG-GGGTTSCC-CSSSEEEEEEECTTTTCGGG--CCCCHHHHHHHHHHHHHHHCSSCCEEEEEET
T ss_pred CCCCCEEEEECCCCCCH-HHHHHHHh-cCCCCEEEEEECCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 45678999999999998 89999988 87779999999999866543 34689999999999999985 4689999999
Q ss_pred cchHHHHHHHH---hCCcccceEEEecCCCCCCCcc-hHHHhhhhh-hhhhhhc------cCCCChHHHHHHhhhhhccC
Q 024042 130 YGGFVAYHMAR---MWPERVEKVVIASSGVNMKRGD-NEALVKRAN-LERIDHL------MLPESASQLRTLTGLAVSKN 198 (273)
Q Consensus 130 ~Gg~~a~~~a~---~~~~~v~~~v~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 198 (273)
|||.+|+.+|. .+++++.++|++++........ ......... ....... ........+.......+...
T Consensus 94 ~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (265)
T 3ils_A 94 SGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGSTEPPSYLIPHFTAVVDVM 173 (265)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCSSSCSCCCTTHHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999998 6677899999998765433211 111111000 0000000 00111111111111111000
Q ss_pred CCCChhhHHhhhhccEE-EEecCC---CCCC--------------ChHHHHHHHHHhc-CCcEEEEeCCCCCCcC--cCC
Q 024042 199 LDIVPDFFFNDFVHDVL-IVWGDQ---DQIF--------------PLKMATELKELLG-KKARLEIIENTSHVPQ--IEN 257 (273)
Q Consensus 199 ~~~~~~~~~~~~~~p~l-~i~g~~---D~~~--------------~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~--~~~ 257 (273)
..+... ....+.+|++ +++|++ |..+ +......+.+... .+.++++++++||+.+ .++
T Consensus 174 ~~~~~~-~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~ 252 (265)
T 3ils_A 174 LDYKLA-PLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQKEH 252 (265)
T ss_dssp TTCCCC-CCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHSTTCCEEEEEEEEEETTGGGSTTT
T ss_pred HhcCCC-CCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCCccceeEEEcCCCCcceeeChhh
Confidence 000000 0124667988 999999 9987 4444566666663 4899999999999999 899
Q ss_pred hhhHHHHHHHHhc
Q 024042 258 PGLFNSIVKNFLR 270 (273)
Q Consensus 258 ~~~~~~~i~~fl~ 270 (273)
++++.+.|.+||+
T Consensus 253 ~~~v~~~i~~fL~ 265 (265)
T 3ils_A 253 VSIISDLIDRVMA 265 (265)
T ss_dssp THHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999984
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-26 Score=167.43 Aligned_cols=176 Identities=15% Similarity=0.171 Sum_probs=136.0
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcC---CCeEEeecCC-------------------CCCCCCCCCccccHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAP---HFNVYVPDLI-------------------FFGHSTTRSIQRTELFQA 108 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~---~~~v~~~d~~-------------------g~g~s~~~~~~~~~~~~~ 108 (273)
.++.|+||++||++++. ..|..+.+.|.+ +|.|+++|.| |+|.+. .....+.++.+
T Consensus 11 ~~~~~~vv~~HG~~~~~-~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~-~~~~~~~~~~~ 88 (218)
T 1auo_A 11 KPADACVIWLHGLGADR-YDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPAR-SISLEELEVSA 88 (218)
T ss_dssp SCCSEEEEEECCTTCCT-TTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSC-EECHHHHHHHH
T ss_pred CCCCcEEEEEecCCCCh-hhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccc-ccchHHHHHHH
Confidence 46788999999999998 889999999985 4999998765 444332 22234677778
Q ss_pred HHHHHHHHHh---C--CccEEEEEeccchHHHHHHHH-hCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCC
Q 024042 109 ASLGKLLEKI---G--VERFSVVGTSYGGFVAYHMAR-MWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPE 182 (273)
Q Consensus 109 ~~~~~~~~~~---~--~~~i~l~G~S~Gg~~a~~~a~-~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (273)
+++..+++.+ + .++++++|||+||.+|+.++. ++|++++++|++++...... +..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~--------------~~~----- 149 (218)
T 1auo_A 89 KMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFG--------------DEL----- 149 (218)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCC--------------TTC-----
T ss_pred HHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCch--------------hhh-----
Confidence 8888888876 4 358999999999999999999 99999999999998765300 000
Q ss_pred ChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcC---CcEEEEeCCCCCCcCcCChh
Q 024042 183 SASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGK---KARLEIIENTSHVPQIENPG 259 (273)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~ 259 (273)
......+..|+++++|++|.++|.+..+.+.+.+.. +.++++++ +||..+.+.++
T Consensus 150 ---------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~ 207 (218)
T 1auo_A 150 ---------------------ELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIH 207 (218)
T ss_dssp ---------------------CCCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHH
T ss_pred ---------------------hhhhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccCHHHHH
Confidence 000134456999999999999999999999988832 59999999 99998777666
Q ss_pred hHHHHHHHHh
Q 024042 260 LFNSIVKNFL 269 (273)
Q Consensus 260 ~~~~~i~~fl 269 (273)
++.+.+.++|
T Consensus 208 ~~~~~l~~~l 217 (218)
T 1auo_A 208 DIGAWLAARL 217 (218)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6655555554
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=179.01 Aligned_cols=211 Identities=15% Similarity=0.056 Sum_probs=149.9
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~ 100 (273)
.....+...+|..+.+..+.+ .++++|+|||+||.+ ++. ..|..+.+.|.+. |.|+++|+||++.
T Consensus 38 ~~~~~i~~~~~~~~~~~~~~p----~~~~~p~vv~~HGgg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~~~~~------ 106 (262)
T 2pbl_A 38 RARLNLSYGEGDRHKFDLFLP----EGTPVGLFVFVHGGYWMAFDK-SSWSHLAVGALSKGWAVAMPSYELCPE------ 106 (262)
T ss_dssp GEEEEEESSSSTTCEEEEECC----SSSCSEEEEEECCSTTTSCCG-GGCGGGGHHHHHTTEEEEEECCCCTTT------
T ss_pred CCccccccCCCCCceEEEEcc----CCCCCCEEEEEcCcccccCCh-HHHHHHHHHHHhCCCEEEEeCCCCCCC------
Confidence 345567665665555544431 126678999999954 566 7888888888766 9999999998864
Q ss_pred cccHHHHHHHHHHHHHHhCC---ccEEEEEeccchHHHHHHHHhC------CcccceEEEecCCCCCCCcchHHHhhhhh
Q 024042 101 QRTELFQAASLGKLLEKIGV---ERFSVVGTSYGGFVAYHMARMW------PERVEKVVIASSGVNMKRGDNEALVKRAN 171 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~~------~~~v~~~v~~~~~~~~~~~~~~~~~~~~~ 171 (273)
.+....++++.++++.+.. ++++++|||+||.+|+.++.++ +++++++|+++|............
T Consensus 107 -~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~~~----- 180 (262)
T 2pbl_A 107 -VRISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSM----- 180 (262)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTT-----
T ss_pred -CChHHHHHHHHHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhhhh-----
Confidence 3456667777777776643 5999999999999999999887 889999999999766432110000
Q ss_pred hhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCC
Q 024042 172 LERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSH 251 (273)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 251 (273)
.... .......... .+......+..|+++++|++|..++.+.++.+.+.+ + +++++++++||
T Consensus 181 ----~~~~-~~~~~~~~~~-----------~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~-~-~~~~~~~~~~H 242 (262)
T 2pbl_A 181 ----NEKF-KMDADAAIAE-----------SPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAW-D-ADHVIAFEKHH 242 (262)
T ss_dssp ----HHHH-CCCHHHHHHT-----------CGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHH-T-CEEEEETTCCT
T ss_pred ----hhhh-CCCHHHHHhc-----------CcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHh-C-CeEEEeCCCCc
Confidence 0000 0011111000 111122345569999999999999999999999999 5 99999999999
Q ss_pred CcCcCChhhHHHHHHHHhc
Q 024042 252 VPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 252 ~~~~~~~~~~~~~i~~fl~ 270 (273)
+.+.++++.....+.+++.
T Consensus 243 ~~~~~~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 243 FNVIEPLADPESDLVAVIT 261 (262)
T ss_dssp TTTTGGGGCTTCHHHHHHH
T ss_pred chHHhhcCCCCcHHHHHHh
Confidence 9999988877777777653
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=180.72 Aligned_cols=171 Identities=14% Similarity=0.092 Sum_probs=133.2
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHH-----HHHhCCccEEEE
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKL-----LEKIGVERFSVV 126 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~l~ 126 (273)
+.|+||++||++++. ..|..+.+.|.+. |.|+++|+||+|.+..... .+.....+.+.+. ...++.++++++
T Consensus 95 ~~p~vv~~HG~~~~~-~~~~~~~~~la~~G~~vv~~d~~g~g~s~~~~~-~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~ 172 (306)
T 3vis_A 95 TYGAIAISPGYTGTQ-SSIAWLGERIASHGFVVIAIDTNTTLDQPDSRA-RQLNAALDYMLTDASSAVRNRIDASRLAVM 172 (306)
T ss_dssp CEEEEEEECCTTCCH-HHHHHHHHHHHTTTEEEEEECCSSTTCCHHHHH-HHHHHHHHHHHHTSCHHHHTTEEEEEEEEE
T ss_pred CCCEEEEeCCCcCCH-HHHHHHHHHHHhCCCEEEEecCCCCCCCcchHH-HHHHHHHHHHHhhcchhhhccCCcccEEEE
Confidence 678999999999998 8999999999887 9999999999998753211 1111112222211 112245789999
Q ss_pred EeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhH
Q 024042 127 GTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFF 206 (273)
Q Consensus 127 G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (273)
|||+||.+++.++.++|+ ++++|++++.... ..
T Consensus 173 G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~~----------------------------------------------~~ 205 (306)
T 3vis_A 173 GHSMGGGGTLRLASQRPD-LKAAIPLTPWHLN----------------------------------------------KS 205 (306)
T ss_dssp EETHHHHHHHHHHHHCTT-CSEEEEESCCCSC----------------------------------------------CC
T ss_pred EEChhHHHHHHHHhhCCC-eeEEEEeccccCc----------------------------------------------cc
Confidence 999999999999999987 9999999875431 00
Q ss_pred HhhhhccEEEEecCCCCCCChH-HHHHHHHHhcC--CcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 207 FNDFVHDVLIVWGDQDQIFPLK-MATELKELLGK--KARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 207 ~~~~~~p~l~i~g~~D~~~~~~-~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
...+..|+++++|++|.+++.+ ..+.+.+.+.. +.++++++++||..+.+.++++.+.+.+||+++
T Consensus 206 ~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~~~~~i~~fl~~~ 274 (306)
T 3vis_A 206 WRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLELDGASHFAPNITNKTIGMYSVAWLKRF 274 (306)
T ss_dssp CTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEECCCCccchhhchhHHHHHHHHHHHHH
Confidence 1223349999999999999998 68999998843 678999999999999999999999999999864
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=184.25 Aligned_cols=235 Identities=12% Similarity=0.105 Sum_probs=155.7
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcccc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
.+...+.. +|.++..+.+.| ...++.|+||++||++++....|..+...+.+. |.|+++|+||+|.|.......+
T Consensus 168 ~~~v~i~~-~g~~l~~~~~~P---~~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~ 243 (415)
T 3mve_A 168 IKQLEIPF-EKGKITAHLHLT---NTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTED 243 (415)
T ss_dssp EEEEEEEC-SSSEEEEEEEES---CSSSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCCSC
T ss_pred eEEEEEEE-CCEEEEEEEEec---CCCCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCC
Confidence 34445555 777887776643 224567899999999988635666667777555 9999999999999986655555
Q ss_pred HHHHHHHHHHHHHHhC---CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhh--hhhhhhhhc
Q 024042 104 ELFQAASLGKLLEKIG---VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR--ANLERIDHL 178 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 178 (273)
......++.+++.... .++++++|||+||.+|+.++..+|++++++|+++|............... .....+...
T Consensus 244 ~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (415)
T 3mve_A 244 YSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQMPKMYLDVLASR 323 (415)
T ss_dssp TTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHHHHhHHHHHHHHHHH
Confidence 6666677777776654 47899999999999999999999999999999998753211100000000 000000000
Q ss_pred c--CCCChHHHHHHhhhhhccCCCCChhhH--HhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcC
Q 024042 179 M--LPESASQLRTLTGLAVSKNLDIVPDFF--FNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQ 254 (273)
Q Consensus 179 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 254 (273)
. .......+....... . ...... ..++..|+|+++|++|.++|.+..+.+.+.. ++++++++++..+
T Consensus 324 ~g~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~-~~~~l~~i~g~~~--- 394 (415)
T 3mve_A 324 LGKSVVDIYSLSGQMAAW--S---LKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFS-TYGKAKKISSKTI--- 394 (415)
T ss_dssp TTCSSBCHHHHHHHGGGG--C---TTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHHTB-TTCEEEEECCCSH---
T ss_pred hCCCccCHHHHHHHHhhc--C---cccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCceEEEecCCCc---
Confidence 0 111111111111110 0 001001 2466779999999999999999999998876 8999999997222
Q ss_pred cCChhhHHHHHHHHhccc
Q 024042 255 IENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 255 ~~~~~~~~~~i~~fl~~~ 272 (273)
.+.++++.+.+.+||+++
T Consensus 395 h~~~~~~~~~i~~fL~~~ 412 (415)
T 3mve_A 395 TQGYEQSLDLAIKWLEDE 412 (415)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHH
Confidence 235678888999999875
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-25 Score=169.55 Aligned_cols=198 Identities=14% Similarity=0.183 Sum_probs=139.5
Q ss_pred CCCCCeEEEEcCCC-----CchhHhHHHHHHhh-----cCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC
Q 024042 51 TLKKPSLVLIHGFG-----PEAIWQWRKQVQFF-----APHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV 120 (273)
Q Consensus 51 ~~~~~~vi~~hG~~-----~~~~~~~~~~~~~l-----~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (273)
.++.|+||++||.+ ++. ..|..+++.| ..+|.|+++|+|+.+.... ....++..+.+..+++.++.
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~-~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~---~~~~~d~~~~~~~l~~~~~~ 113 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTP-NDFNQLANTIKSMDTESTVCQYSIEYRLSPEITN---PRNLYDAVSNITRLVKEKGL 113 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCG-GGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT---THHHHHHHHHHHHHHHHHTC
T ss_pred CCCCeEEEEECCCcccCCcCCh-HHHHHHHHHHhhhhccCCcEEEEeecccCCCCCC---CcHHHHHHHHHHHHHHhCCc
Confidence 45678999999955 345 7889999988 4459999999998765432 24566677777778888888
Q ss_pred ccEEEEEeccchHHHHHHHHhC-----------------CcccceEEEecCCCCCCCcchHHHhhhhhhhhh-hhccCCC
Q 024042 121 ERFSVVGTSYGGFVAYHMARMW-----------------PERVEKVVIASSGVNMKRGDNEALVKRANLERI-DHLMLPE 182 (273)
Q Consensus 121 ~~i~l~G~S~Gg~~a~~~a~~~-----------------~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 182 (273)
++++++|||+||.+|+.++.++ +++++++|++++....... .........+ ...+...
T Consensus 114 ~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 189 (273)
T 1vkh_A 114 TNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKEL----LIEYPEYDCFTRLAFPDG 189 (273)
T ss_dssp CCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHH----HHHCGGGHHHHHHHCTTC
T ss_pred CcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHh----hhhcccHHHHHHHHhccc
Confidence 9999999999999999999886 7789999999886543211 0000000000 0000000
Q ss_pred ------ChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCc
Q 024042 183 ------SASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVP 253 (273)
Q Consensus 183 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~ 253 (273)
........ ......++..|+++++|++|.++|.+.++.+.+.+ +.++++++++++||..
T Consensus 190 ~~~~~~~~~~~~~~------------~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~ 257 (273)
T 1vkh_A 190 IQMYEEEPSRVMPY------------VKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHND 257 (273)
T ss_dssp GGGCCCCHHHHHHH------------HHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGG
T ss_pred ccchhhcccccChh------------hhhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccc
Confidence 00000000 00112235669999999999999999999998877 2468999999999998
Q ss_pred CcCChhhHHHHHHHHh
Q 024042 254 QIENPGLFNSIVKNFL 269 (273)
Q Consensus 254 ~~~~~~~~~~~i~~fl 269 (273)
+.++ +++.+.|.+||
T Consensus 258 ~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 258 VYKN-GKVAKYIFDNI 272 (273)
T ss_dssp GGGC-HHHHHHHHHTC
T ss_pred cccC-hHHHHHHHHHc
Confidence 8888 88999999987
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-26 Score=191.51 Aligned_cols=230 Identities=18% Similarity=0.167 Sum_probs=158.2
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCc--hhHhHHHHHHhhcCC-CeEEeecCCC---CCCCCC
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPE--AIWQWRKQVQFFAPH-FNVYVPDLIF---FGHSTT 97 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~--~~~~~~~~~~~l~~~-~~v~~~d~~g---~g~s~~ 97 (273)
..+...++..+|.+++++.+.|+.. ..+.|+||++||.+.. . ..|..+++.|.+. |.|+++|+|| +|.+..
T Consensus 332 ~~~~~~~~~~~g~~i~~~~~~p~~~--~~~~p~vv~~HG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~ 408 (582)
T 3o4h_A 332 GSRLVWVESFDGSRVPTYVLESGRA--PTPGPTVVLVHGGPFAEDS-DSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWR 408 (582)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTS--CSSEEEEEEECSSSSCCCC-SSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHH
T ss_pred cceEEEEECCCCCEEEEEEEcCCCC--CCCCcEEEEECCCcccccc-cccCHHHHHHHhCCCEEEEeccCCCCCCchhHH
Confidence 3455667777898999888764322 2367899999997655 4 6778888888766 9999999999 555421
Q ss_pred C-----CccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh
Q 024042 98 R-----SIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL 172 (273)
Q Consensus 98 ~-----~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (273)
. ......++..+.+..+++....++++++|||+||.+|+.++.++|++++++|+++|...... .......
T Consensus 409 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~-----~~~~~~~ 483 (582)
T 3o4h_A 409 LKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEE-----MYELSDA 483 (582)
T ss_dssp HTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHH-----HHHTCCH
T ss_pred hhhhhhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHH-----Hhhcccc
Confidence 1 11223444444444444443345999999999999999999999999999999998655321 1100000
Q ss_pred h--hhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeC
Q 024042 173 E--RIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIE 247 (273)
Q Consensus 173 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~ 247 (273)
. .+............. ...+.....++..|+|+++|++|..+|.+.++.+++.+ +.++++++++
T Consensus 484 ~~~~~~~~~~~~~~~~~~-----------~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~ 552 (582)
T 3o4h_A 484 AFRNFIEQLTGGSREIMR-----------SRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIP 552 (582)
T ss_dssp HHHHHHHHHTTTCHHHHH-----------HTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEET
T ss_pred hhHHHHHHHcCcCHHHHH-----------hcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 0 000101111111111 11333445666779999999999999999999998887 2458999999
Q ss_pred CCCCCcC-cCChhhHHHHHHHHhccc
Q 024042 248 NTSHVPQ-IENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 248 ~~gH~~~-~~~~~~~~~~i~~fl~~~ 272 (273)
++||.+. .++++++.+.+.+||+++
T Consensus 553 ~~gH~~~~~~~~~~~~~~i~~fl~~~ 578 (582)
T 3o4h_A 553 DAGHAINTMEDAVKILLPAVFFLATQ 578 (582)
T ss_dssp TCCSSCCBHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 9999986 567788999999999875
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-26 Score=164.21 Aligned_cols=168 Identities=13% Similarity=0.104 Sum_probs=132.4
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccch
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGG 132 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 132 (273)
++|+||++||++++....|......+.. .++.+|.+|++ ..+.+++++++.++++.++ ++++++|||+||
T Consensus 16 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg 85 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDDEHWQSHWERRFP--HWQRIRQREWY-------QADLDRWVLAIRRELSVCT-QPVILIGHSFGA 85 (191)
T ss_dssp TTCEEEEECCTTCCCTTSHHHHHHHHCT--TSEECCCSCCS-------SCCHHHHHHHHHHHHHTCS-SCEEEEEETHHH
T ss_pred CCceEEEECCCCCCchhhHHHHHHHhcC--CeEEEeccCCC-------CcCHHHHHHHHHHHHHhcC-CCeEEEEEChHH
Confidence 5689999999998764567666654333 45677888764 3478888999999999887 899999999999
Q ss_pred HHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhc
Q 024042 133 FVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVH 212 (273)
Q Consensus 133 ~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (273)
.+|+.++.++|++++++|++++........ +.. .....+..
T Consensus 86 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~------------------~~~---------------------~~~~~~~~ 126 (191)
T 3bdv_A 86 LAACHVVQQGQEGIAGVMLVAPAEPMRFEI------------------DDR---------------------IQASPLSV 126 (191)
T ss_dssp HHHHHHHHTTCSSEEEEEEESCCCGGGGTC------------------TTT---------------------SCSSCCSS
T ss_pred HHHHHHHHhcCCCccEEEEECCCccccccC------------------ccc---------------------cccccCCC
Confidence 999999999999999999999876532110 000 11234455
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc----CChhhHHHHHHHHhccc
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI----ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~~ 272 (273)
|+++++|++|.++|.+..+.+.+.+ +.++++++++||+.+. +.|+.+ +.+.+||++.
T Consensus 127 P~lii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~-~~i~~fl~~~ 187 (191)
T 3bdv_A 127 PTLTFASHNDPLMSFTRAQYWAQAW--DSELVDVGEAGHINAEAGFGPWEYGL-KRLAEFSEIL 187 (191)
T ss_dssp CEEEEECSSBTTBCHHHHHHHHHHH--TCEEEECCSCTTSSGGGTCSSCHHHH-HHHHHHHHTT
T ss_pred CEEEEecCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCcccccccchhHHHHH-HHHHHHHHHh
Confidence 9999999999999999999998887 7899999999999887 455555 9999999763
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.1e-27 Score=180.20 Aligned_cols=228 Identities=10% Similarity=0.026 Sum_probs=135.5
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchh--HhHHHHHHhhcCCCeEEee----cCCCCCCCCCCCcc
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI--WQWRKQVQFFAPHFNVYVP----DLIFFGHSTTRSIQ 101 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~--~~~~~~~~~l~~~~~v~~~----d~~g~g~s~~~~~~ 101 (273)
..+..+.+..++|...++ ..+.+|+|||+||++++.. ..|..+++.|+.+|+|+++ |+||||.|...
T Consensus 16 ~~~~~~~~~~~~y~~~g~----~~~~~~~vvllHG~~~~~~~~~~~~~l~~~L~~g~~Vi~~Dl~~D~~G~G~S~~~--- 88 (335)
T 2q0x_A 16 HLFTYYKDPYCKIPVFMM----NMDARRCVLWVGGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSGKIGSGPQDHA--- 88 (335)
T ss_dssp EEEEEEEETTEEEEEEEE----CTTSSSEEEEECCTTCCTTCSTTHHHHHHHHTTTCEEEEECCGGGBTTSCSCCHH---
T ss_pred EEEecCCCCceeEEEecc----CCCCCcEEEEECCCCccccchhHHHHHHHHHHCCcEEEEEeccCCCCCCCCcccc---
Confidence 334333336678876641 1345689999999986541 2367888889667999999 56999998532
Q ss_pred ccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHH--hCCcccceEEEecCCCCCCCcc--h---HHHhhhhh-h-
Q 024042 102 RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR--MWPERVEKVVIASSGVNMKRGD--N---EALVKRAN-L- 172 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~--~~~~~v~~~v~~~~~~~~~~~~--~---~~~~~~~~-~- 172 (273)
...++..+.+..+.+.++.++++|+||||||.+|+.+|. .+|++|+++|++++........ . ........ .
T Consensus 89 ~~~~d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (335)
T 2q0x_A 89 HDAEDVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAARKEHVEKLM 168 (335)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHHHHHHHHHh
Confidence 122222333333334468899999999999999999998 5799999999999865332110 0 00000000 0
Q ss_pred -h----hhh---hcc-CCCChHHHHHHhhh-----hhccC---CCCChhhHHhhhhccEEEEecCCCCCCChHH-----H
Q 024042 173 -E----RID---HLM-LPESASQLRTLTGL-----AVSKN---LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKM-----A 230 (273)
Q Consensus 173 -~----~~~---~~~-~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~-----~ 230 (273)
. ... ... .+............ .+... ........+.++..|+|+|+|++|.++|.+. .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~~~~~ 248 (335)
T 2q0x_A 169 AEGRGEDSLAMLKHYDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGTVL 248 (335)
T ss_dssp HHTCTTCGGGGTTTCSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHHHHHH
T ss_pred hccCccccccchhhccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhHHHHH
Confidence 0 000 000 00000000000000 00000 0000112345667799999999999999753 4
Q ss_pred HHHHHHhcCCcE--------E-----EEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 231 TELKELLGKKAR--------L-----EIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 231 ~~~~~~~~~~~~--------~-----~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+.+.+.+ ++.+ + ++++++|| ++.+.|.+||++
T Consensus 249 ~~l~~~~-~~~~~~~~~~~~~~~~~~~~i~~agH--------e~~~~i~~FL~~ 293 (335)
T 2q0x_A 249 EGVRDHT-GCNRVTVSYFNDTCDELRRVLKAAES--------EHVAAILQFLAD 293 (335)
T ss_dssp HHHHHHS-SSSCEEEEECCCEECTTSCEEECCHH--------HHHHHHHHHHHH
T ss_pred HHHHHhc-CccccccccccchhhhhhcccCCCCC--------HHHHHHHHHHHh
Confidence 6677777 6776 6 78999999 348888889864
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-26 Score=167.44 Aligned_cols=175 Identities=18% Similarity=0.213 Sum_probs=136.9
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhc---CCCeEEeecCC-------------------CCCCCCCCCccccHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFA---PHFNVYVPDLI-------------------FFGHSTTRSIQRTELFQA 108 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~---~~~~v~~~d~~-------------------g~g~s~~~~~~~~~~~~~ 108 (273)
+++.|+||++||++++. ..|..+++.|. .+|.|+++|+| |+|.+. .....+..+.+
T Consensus 21 ~~~~~~vv~lHG~~~~~-~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~-~~~~~~~~~~~ 98 (226)
T 3cn9_A 21 PNADACIIWLHGLGADR-TDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPAR-AIDEDQLNASA 98 (226)
T ss_dssp TTCCEEEEEECCTTCCG-GGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTT-CBCHHHHHHHH
T ss_pred CCCCCEEEEEecCCCCh-HHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccc-cccchhHHHHH
Confidence 56788999999999998 88999999998 55999997766 566432 33345777888
Q ss_pred HHHHHHHHHh---CC--ccEEEEEeccchHHHHHHHH-hCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCC
Q 024042 109 ASLGKLLEKI---GV--ERFSVVGTSYGGFVAYHMAR-MWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPE 182 (273)
Q Consensus 109 ~~~~~~~~~~---~~--~~i~l~G~S~Gg~~a~~~a~-~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (273)
+++..+++.+ +. ++++++|||+||.+|+.++. ++|++++++|++++........ .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~--------------~----- 159 (226)
T 3cn9_A 99 DQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL--------------A----- 159 (226)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC--------------C-----
T ss_pred HHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh--------------h-----
Confidence 8888888887 54 69999999999999999999 9999999999999865432110 0
Q ss_pred ChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc---CCcEEEEeCCCCCCcCcCChh
Q 024042 183 SASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG---KKARLEIIENTSHVPQIENPG 259 (273)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~ 259 (273)
. ....+..|+++++|++|.++|.+..+.+.+.+. .+.++++++ +||..+.+.+
T Consensus 160 -------------------~---~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~- 215 (226)
T 3cn9_A 160 -------------------L---DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEI- 215 (226)
T ss_dssp -------------------C---CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCCHHHH-
T ss_pred -------------------h---cccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcchhhH-
Confidence 0 013445599999999999999999999988882 268999999 9999865544
Q ss_pred hHHHHHHHHhcccC
Q 024042 260 LFNSIVKNFLRGSL 273 (273)
Q Consensus 260 ~~~~~i~~fl~~~l 273 (273)
+.+.+||++.|
T Consensus 216 ---~~i~~~l~~~l 226 (226)
T 3cn9_A 216 ---HDIGAWLRKRL 226 (226)
T ss_dssp ---HHHHHHHHHHC
T ss_pred ---HHHHHHHHhhC
Confidence 45667776543
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.95 E-value=7e-26 Score=173.98 Aligned_cols=211 Identities=18% Similarity=0.135 Sum_probs=145.9
Q ss_pred CCCCCeEEEEcCC--CCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh-CCccEEEEE
Q 024042 51 TLKKPSLVLIHGF--GPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI-GVERFSVVG 127 (273)
Q Consensus 51 ~~~~~~vi~~hG~--~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G 127 (273)
.+.+|+|||+||+ +++. ..|..+...|..+|+|+++|+||+|.+... ..+.+..++++.+.++.+ +.++++|+|
T Consensus 78 ~~~~~~lv~lhG~~~~~~~-~~~~~~~~~L~~~~~v~~~d~~G~G~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~lvG 154 (319)
T 3lcr_A 78 GQLGPQLILVCPTVMTTGP-QVYSRLAEELDAGRRVSALVPPGFHGGQAL--PATLTVLVRSLADVVQAEVADGEFALAG 154 (319)
T ss_dssp CCSSCEEEEECCSSTTCSG-GGGHHHHHHHCTTSEEEEEECTTSSTTCCE--ESSHHHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred CCCCCeEEEECCCCcCCCH-HHHHHHHHHhCCCceEEEeeCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4567899999995 5666 899999999977799999999999986543 348888888888888877 558999999
Q ss_pred eccchHHHHHHHHhC---CcccceEEEecCCCCCCCc-chHHHhhhhhhhhhhh--ccCCCC--hHHHHHHhhhhhccCC
Q 024042 128 TSYGGFVAYHMARMW---PERVEKVVIASSGVNMKRG-DNEALVKRANLERIDH--LMLPES--ASQLRTLTGLAVSKNL 199 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~---~~~v~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~ 199 (273)
|||||.+|+.+|.++ +++++++|++++....... ....+........... ...... ...+...... .....
T Consensus 155 hS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ 233 (319)
T 3lcr_A 155 HSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQRITAQVWC-LELLR 233 (319)
T ss_dssp ETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH-HHHTT
T ss_pred ECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHH-HHHHh
Confidence 999999999999988 8889999999987654432 1111111110000000 001111 1111111111 00001
Q ss_pred CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcC--ChhhHHHHHHHHhcc
Q 024042 200 DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE--NPGLFNSIVKNFLRG 271 (273)
Q Consensus 200 ~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~ 271 (273)
.+.+ ..+..|+|+++|++ ..++....+.+.+.+....+++.++ ++|+.+++ +++++.+.|.+||++
T Consensus 234 ~~~~----~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~-g~H~~~~~~~~~~~va~~i~~fL~~ 301 (319)
T 3lcr_A 234 GWRP----EGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLAAMGQVVEAP-GDHFTIIEGEHVASTAHIVGDWLRE 301 (319)
T ss_dssp TCCC----CCCSSCEEEEEESS-CSSSCCCTHHHHHHHHTCSEEEEES-SCTTGGGSTTTHHHHHHHHHHHHHH
T ss_pred cCCC----CCcCCCEEEEEeCC-CCCCcccchhhhhcCCCCceEEEeC-CCcHHhhCcccHHHHHHHHHHHHHh
Confidence 1111 45667999999998 4556666777777775568888888 68887776 999999999999975
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=9e-26 Score=163.45 Aligned_cols=183 Identities=18% Similarity=0.125 Sum_probs=131.7
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeec-------------CCCCCCCCCCCc-
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPD-------------LIFFGHSTTRSI- 100 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d-------------~~g~g~s~~~~~- 100 (273)
|..+.|.... ..+++.| ||++||++++. ..|..+.+.|..++.|+++| ++|+|.+.....
T Consensus 2 G~~~~~~~~~----~~~~~~p-vv~lHG~g~~~-~~~~~~~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~ 75 (209)
T 3og9_A 2 GHMTDYVFKA----GRKDLAP-LLLLHSTGGDE-HQLVEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFD 75 (209)
T ss_dssp --CCCEEEEC----CCTTSCC-EEEECCTTCCT-TTTHHHHHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBC
T ss_pred CCcceEEEeC----CCCCCCC-EEEEeCCCCCH-HHHHHHHHhcCCCceEEEecCCcCCCCcccceecccccccccCCCC
Confidence 4455555543 2245667 99999999998 88999999999779999999 667766543222
Q ss_pred cccHHHHHHHHHHHH----HHhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhh
Q 024042 101 QRTELFQAASLGKLL----EKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLER 174 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~----~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (273)
.......++++.+++ +..+. ++++++|||+||.+|+.++.++|++++++|++++.........
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~----------- 144 (209)
T 3og9_A 76 LESLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFEQT----------- 144 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCccccc-----------
Confidence 223344444444444 44454 7999999999999999999999999999999998654321100
Q ss_pred hhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCC
Q 024042 175 IDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSH 251 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH 251 (273)
......|+++++|++|.++|.+.++.+.+.+ +.+.++++++ +||
T Consensus 145 --------------------------------~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH 191 (209)
T 3og9_A 145 --------------------------------VQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGH 191 (209)
T ss_dssp --------------------------------CCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STT
T ss_pred --------------------------------ccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCC
Confidence 0112339999999999999999988888877 2357788887 799
Q ss_pred CcCcCChhhHHHHHHHHhcc
Q 024042 252 VPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 252 ~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+. .+..+.+.+||++
T Consensus 192 ~~~----~~~~~~~~~~l~~ 207 (209)
T 3og9_A 192 QLT----QEEVLAAKKWLTE 207 (209)
T ss_dssp SCC----HHHHHHHHHHHHH
T ss_pred cCC----HHHHHHHHHHHHh
Confidence 874 3445677788865
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=162.26 Aligned_cols=182 Identities=15% Similarity=0.174 Sum_probs=121.2
Q ss_pred CCeEEEEcCCCCchhHhH--HHHHHhh---cCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEe
Q 024042 54 KPSLVLIHGFGPEAIWQW--RKQVQFF---APHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGT 128 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~--~~~~~~l---~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~ 128 (273)
.|+|||+||++++. ..+ ..+.+.+ ..+++|+++|+||+|. +..+++..+++....++++|+||
T Consensus 2 mptIl~lHGf~ss~-~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~-----------~~~~~l~~~~~~~~~~~i~l~G~ 69 (202)
T 4fle_A 2 MSTLLYIHGFNSSP-SSAKATTFKSWLQQHHPHIEMQIPQLPPYPA-----------EAAEMLESIVMDKAGQSIGIVGS 69 (202)
T ss_dssp -CEEEEECCTTCCT-TCHHHHHHHHHHHHHCTTSEEECCCCCSSHH-----------HHHHHHHHHHHHHTTSCEEEEEE
T ss_pred CcEEEEeCCCCCCC-CccHHHHHHHHHHHcCCCcEEEEeCCCCCHH-----------HHHHHHHHHHHhcCCCcEEEEEE
Confidence 37999999998876 433 2333333 3459999999999874 35677888888888899999999
Q ss_pred ccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhc---cCCCChHHHHHHhhhhhccCCCCChhh
Q 024042 129 SYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHL---MLPESASQLRTLTGLAVSKNLDIVPDF 205 (273)
Q Consensus 129 S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (273)
||||.+|+.+|.+++..+..++...+.... ............ .............. ...
T Consensus 70 SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 131 (202)
T 4fle_A 70 SLGGYFATWLSQRFSIPAVVVNPAVRPFEL--------LSDYLGENQNPYTGQKYVLESRHIYDLKA----------MQI 131 (202)
T ss_dssp THHHHHHHHHHHHTTCCEEEESCCSSHHHH--------GGGGCEEEECTTTCCEEEECHHHHHHHHT----------TCC
T ss_pred ChhhHHHHHHHHHhcccchheeeccchHHH--------HHHhhhhhccccccccccchHHHHHHHHh----------hhh
Confidence 999999999999999876666554432111 110000000000 00001111111100 001
Q ss_pred HHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 206 FFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 206 ~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
...++..|+|+++|++|.++|.+.++++. +++++.+++|+||.+ ++++++.+.|.+||+-
T Consensus 132 ~~~~~~~P~LiihG~~D~~Vp~~~s~~l~----~~~~l~i~~g~~H~~--~~~~~~~~~I~~FL~~ 191 (202)
T 4fle_A 132 EKLESPDLLWLLQQTGDEVLDYRQAVAYY----TPCRQTVESGGNHAF--VGFDHYFSPIVTFLGL 191 (202)
T ss_dssp SSCSCGGGEEEEEETTCSSSCHHHHHHHT----TTSEEEEESSCCTTC--TTGGGGHHHHHHHHTC
T ss_pred hhhccCceEEEEEeCCCCCCCHHHHHHHh----hCCEEEEECCCCcCC--CCHHHHHHHHHHHHhh
Confidence 12344559999999999999999887664 688999999999963 5677888999999974
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-26 Score=176.43 Aligned_cols=230 Identities=14% Similarity=0.059 Sum_probs=147.9
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~ 100 (273)
+...+..++| .+.++.+. . .++.|+||++||++ ++. ..|..+...|+. ++.|+++|+||+|.+..+..
T Consensus 57 ~~~~i~~~~g-~i~~~~y~----~-~~~~p~vv~~HGgg~~~g~~-~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~~ 129 (311)
T 1jji_A 57 EDRTIKGRNG-DIRVRVYQ----Q-KPDSPVLVYYHGGGFVICSI-ESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAA 129 (311)
T ss_dssp EEEEEEETTE-EEEEEEEE----S-SSSEEEEEEECCSTTTSCCT-GGGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHH
T ss_pred EEEEecCCCC-cEEEEEEc----C-CCCceEEEEECCcccccCCh-hHhHHHHHHHHHHhCCEEEEecCCCCCCCCCCCc
Confidence 3445555566 55555442 1 35678999999988 677 788888888873 59999999999999986654
Q ss_pred cccHHHHHHHHHHHHHHhCCc--cEEEEEeccchHHHHHHHHhCCcc----cceEEEecCCCCCCCcchHHHhhhhhhhh
Q 024042 101 QRTELFQAASLGKLLEKIGVE--RFSVVGTSYGGFVAYHMARMWPER----VEKVVIASSGVNMKRGDNEALVKRANLER 174 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~----v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (273)
..+....++++.+.++.++.+ +++++|||+||.+|+.++.+++++ ++++|+++|........... ....
T Consensus 130 ~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~-~~~~---- 204 (311)
T 1jji_A 130 VYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSL-LEFG---- 204 (311)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHH-HHTS----
T ss_pred HHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCccH-HHhc----
Confidence 456666677777777777664 899999999999999999887765 99999999987654332111 1000
Q ss_pred hhhccCCCChHHHHHHhhhhhcc-----CCCCChhh-HHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEE
Q 024042 175 IDHLMLPESASQLRTLTGLAVSK-----NLDIVPDF-FFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEI 245 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~ 245 (273)
..................... .....+.. .... ..|+++++|+.|.+++ ..+.+.+.+ +.++++++
T Consensus 205 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~-~~P~li~~G~~D~l~~--~~~~~~~~l~~~g~~~~~~~ 279 (311)
T 1jji_A 205 --EGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLEN-LPPALIITAEYDPLRD--EGEVFGQMLRRAGVEASIVR 279 (311)
T ss_dssp --SSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTT-CCCEEEEEEEECTTHH--HHHHHHHHHHHTTCCEEEEE
T ss_pred --CCCccCCHHHHHHHHHHhCCCCccCCCcccCcccccccC-CChheEEEcCcCcchH--HHHHHHHHHHHcCCCEEEEE
Confidence 000001111111111111000 00001110 1111 1399999999999874 333333333 37899999
Q ss_pred eCCCCCCcCcC-----ChhhHHHHHHHHhccc
Q 024042 246 IENTSHVPQIE-----NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 246 ~~~~gH~~~~~-----~~~~~~~~i~~fl~~~ 272 (273)
+++++|.+... ..+++.+.+.+||+++
T Consensus 280 ~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 311 (311)
T 1jji_A 280 YRGVLHGFINYYPVLKAARDAINQIAALLVFD 311 (311)
T ss_dssp EEEEETTGGGGTTTCHHHHHHHHHHHHHHHCC
T ss_pred ECCCCeeccccCCcCHHHHHHHHHHHHHHhhC
Confidence 99999987543 3467888899999763
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.3e-26 Score=173.59 Aligned_cols=212 Identities=13% Similarity=0.084 Sum_probs=141.5
Q ss_pred CCCCCeEEEEcCCCCch-hHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHH-HHHHhCCccEEEEEe
Q 024042 51 TLKKPSLVLIHGFGPEA-IWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGK-LLEKIGVERFSVVGT 128 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~-~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~l~G~ 128 (273)
.+++|+|||+||++++. ...|..+...|..+|.|+++|+||+|.|... ..+.+++++++.+ +++.++.++++|+||
T Consensus 64 ~~~~~~lvllhG~~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~--~~~~~~~a~~~~~~l~~~~~~~~~~LvGh 141 (300)
T 1kez_A 64 GPGEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPL--PSSMAAVAAVQADAVIRTQGDKPFVVAGH 141 (300)
T ss_dssp CSCSSEEEECCCSSTTCSTTTTHHHHHHTSSSCCBCCCCCTTSSTTCCB--CSSHHHHHHHHHHHHHHHCSSCCEEEECC
T ss_pred CCCCCeEEEECCCcccCcHHHHHHHHHhcCCCceEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 45678999999998743 1678899999987899999999999998654 4688888888874 566777789999999
Q ss_pred ccchHHHHHHHHhCC---cccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhh
Q 024042 129 SYGGFVAYHMARMWP---ERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDF 205 (273)
Q Consensus 129 S~Gg~~a~~~a~~~~---~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (273)
|+||.+|+.++.++| ++++++|++++...........+........+................. ....... +
T Consensus 142 S~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~ 216 (300)
T 1kez_A 142 SAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTALGA-YDRLTGQ----W 216 (300)
T ss_dssp THHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHHHHHHHH-HHHHTTT----C
T ss_pred CHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHHHHHHHH-HHHHHhc----C
Confidence 999999999999987 4899999999876543211111111000000000000011111111100 0000001 1
Q ss_pred HHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc-CChhhHHHHHHHHhccc
Q 024042 206 FFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI-ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 206 ~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 272 (273)
....+..|+++++|+ |..+++.. ..+.+.+..+.+++++++ ||+.++ ++|+++.+.|.+||++.
T Consensus 217 ~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~~fl~~~ 281 (300)
T 1kez_A 217 RPRETGLPTLLVSAG-EPMGPWPD-DSWKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDAWLGGG 281 (300)
T ss_dssp CCCCCSCCBEEEEES-SCSSCCCS-SCCSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHHHHHHTCC
T ss_pred CCCCCCCCEEEEEeC-CCCCCCcc-cchhhhcCCCCeEEEecC-CChhhccccHHHHHHHHHHHHHhc
Confidence 124566799999995 55555443 334444434679999998 999986 89999999999999864
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-25 Score=189.59 Aligned_cols=231 Identities=14% Similarity=0.100 Sum_probs=157.0
Q ss_pred CceeEEecCCc-ceEEeecCCccCCCCCCCCCeEEEEcCCCCchh--HhHHH----HHHhhcCC-CeEEeecCCCCCCCC
Q 024042 25 LSSQTIDIDDE-TTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI--WQWRK----QVQFFAPH-FNVYVPDLIFFGHST 96 (273)
Q Consensus 25 ~~~~~~~~~~g-~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~--~~~~~----~~~~l~~~-~~v~~~d~~g~g~s~ 96 (273)
.+...+...+| .+++++.+.|+.....++.|+||++||++.+.. ..|.. ++..|++. |.|+++|+||+|.+.
T Consensus 455 ~~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~ 534 (706)
T 2z3z_A 455 IRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRG 534 (706)
T ss_dssp EEEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSC
T ss_pred cEEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccc
Confidence 34566677788 899998876543222345689999999665431 23443 56777655 999999999999876
Q ss_pred CCCccc----cHHHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHH
Q 024042 97 TRSIQR----TELFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL 166 (273)
Q Consensus 97 ~~~~~~----~~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~ 166 (273)
...... ......+|+.+.++.+ +.++++++|||+||.+|+.++.++|++++++|+++|......... ..
T Consensus 535 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-~~ 613 (706)
T 2z3z_A 535 AAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYAI-MY 613 (706)
T ss_dssp HHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSBH-HH
T ss_pred hhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHHHh-hh
Confidence 431110 1112345555555544 246899999999999999999999999999999998765432111 00
Q ss_pred hhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEE
Q 024042 167 VKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARL 243 (273)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~ 243 (273)
.. .+.. ........+.. ..+.....++..|+|+++|++|..+|.+.++.+.+.+ +.+.++
T Consensus 614 ~~-----~~~~-~~~~~~~~~~~-----------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 676 (706)
T 2z3z_A 614 GE-----RYFD-APQENPEGYDA-----------ANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDY 676 (706)
T ss_dssp HH-----HHHC-CTTTCHHHHHH-----------HCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEE
T ss_pred hh-----hhcC-CcccChhhhhh-----------CCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEE
Confidence 00 0000 00011111111 0223344566679999999999999999998888877 345799
Q ss_pred EEeCCCCCCcCcCChhhHHHHHHHHhcccC
Q 024042 244 EIIENTSHVPQIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 244 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 273 (273)
+++|++||.+..++++++.+.+.+||+++|
T Consensus 677 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 677 YVYPSHEHNVMGPDRVHLYETITRYFTDHL 706 (706)
T ss_dssp EEETTCCSSCCTTHHHHHHHHHHHHHHHHC
T ss_pred EEeCCCCCCCCcccHHHHHHHHHHHHHHhC
Confidence 999999999888888999999999998865
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8.9e-27 Score=172.60 Aligned_cols=206 Identities=13% Similarity=0.145 Sum_probs=127.3
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC---ccEEEEE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV---ERFSVVG 127 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~l~G 127 (273)
.+++++|||+||++++. ..|..+++.|+++|+|+++|+||||.|.... ..+..+.+..+++.++. ++++|+|
T Consensus 10 ~~~~~~lv~lhg~g~~~-~~~~~~~~~L~~~~~vi~~Dl~GhG~S~~~~----~~~~~~~~~~~~~~l~~~~~~~~~lvG 84 (242)
T 2k2q_B 10 ASEKTQLICFPFAGGYS-ASFRPLHAFLQGECEMLAAEPPGHGTNQTSA----IEDLEELTDLYKQELNLRPDRPFVLFG 84 (242)
T ss_dssp TTCCCEEESSCCCCHHH-HHHHHHHHHHCCSCCCEEEECCSSCCSCCCT----TTHHHHHHHHTTTTCCCCCCSSCEEEC
T ss_pred CCCCceEEEECCCCCCH-HHHHHHHHhCCCCeEEEEEeCCCCCCCCCCC----cCCHHHHHHHHHHHHHhhcCCCEEEEe
Confidence 45678999999999998 8999999999888999999999999996432 22333444444445554 6899999
Q ss_pred eccchHHHHHHHHh------CCcccceEEEecCCCCC-CCc-----chHHHhhhhh-hhhhhh------ccCCCChHHHH
Q 024042 128 TSYGGFVAYHMARM------WPERVEKVVIASSGVNM-KRG-----DNEALVKRAN-LERIDH------LMLPESASQLR 188 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~------~~~~v~~~v~~~~~~~~-~~~-----~~~~~~~~~~-~~~~~~------~~~~~~~~~~~ 188 (273)
|||||.+|+.+|.+ +|++ +++.+..... ... .......... ...... ...........
T Consensus 85 hSmGG~iA~~~A~~~~~~~~~p~~---v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (242)
T 2k2q_B 85 HSMGGMITFRLAQKLEREGIFPQA---VIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENKEVMSFFLPSFR 161 (242)
T ss_dssp CSSCCHHHHHHHHHHHHHHCSSCS---EEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTTHHHHTTTTCCSCHH
T ss_pred CCHhHHHHHHHHHHHHHcCCCCCE---EEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHH
Confidence 99999999999987 4443 3433311111 000 0111111100 000000 00000000000
Q ss_pred HHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHH
Q 024042 189 TLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNF 268 (273)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 268 (273)
...... . ...... ..++..|+++++|++|..++ .....+.+.. ++.++++++ +||+.+.++|+++.+.|.+|
T Consensus 162 ~~~~~~--~--~~~~~~-l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~-~~~~~~~~~-~gH~~~~e~p~~~~~~i~~f 233 (242)
T 2k2q_B 162 SDYRAL--E--QFELYD-LAQIQSPVHVFNGLDDKKCI-RDAEGWKKWA-KDITFHQFD-GGHMFLLSQTEEVAERIFAI 233 (242)
T ss_dssp HHHHHH--T--CCCCSC-CTTCCCSEEEEEECSSCCHH-HHHHHHHTTC-CCSEEEEEE-CCCSHHHHHCHHHHHHHHHH
T ss_pred HHHHHH--H--hcccCC-CCccCCCEEEEeeCCCCcCH-HHHHHHHHHh-cCCeEEEEe-CCceeEcCCHHHHHHHHHHH
Confidence 000000 0 000001 34567799999999999864 4455555555 677788887 59999999999999999999
Q ss_pred hccc
Q 024042 269 LRGS 272 (273)
Q Consensus 269 l~~~ 272 (273)
|++.
T Consensus 234 l~~~ 237 (242)
T 2k2q_B 234 LNQH 237 (242)
T ss_dssp HHTT
T ss_pred hhcc
Confidence 9753
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-25 Score=172.36 Aligned_cols=227 Identities=11% Similarity=0.088 Sum_probs=145.1
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCC
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRS 99 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~ 99 (273)
+....++. +|..++++... +++.|+||++||++ ++. ..|..++..|.. +|.|+++|+||.+...
T Consensus 74 ~~~~~~~~-~~~~~~~~~p~------~~~~p~vv~lHGgg~~~~~~-~~~~~~~~~la~~~g~~vi~~D~r~~~~~~--- 142 (326)
T 3d7r_A 74 ANLEKLSL-DDMQVFRFNFR------HQIDKKILYIHGGFNALQPS-PFHWRLLDKITLSTLYEVVLPIYPKTPEFH--- 142 (326)
T ss_dssp SEEEEEEE-TTEEEEEEEST------TCCSSEEEEECCSTTTSCCC-HHHHHHHHHHHHHHCSEEEEECCCCTTTSC---
T ss_pred ceEEEEEE-CCEEEEEEeeC------CCCCeEEEEECCCcccCCCC-HHHHHHHHHHHHHhCCEEEEEeCCCCCCCC---
Confidence 34444445 67666655542 25678999999955 355 677778877763 5999999999865432
Q ss_pred ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcc----cceEEEecCCCCCCCcchH---HHhhhhhh
Q 024042 100 IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPER----VEKVVIASSGVNMKRGDNE---ALVKRANL 172 (273)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~----v~~~v~~~~~~~~~~~~~~---~~~~~~~~ 172 (273)
.....++..+.+..+++.++.++++|+|||+||.+|+.++.++|++ ++++|+++|.......... .....
T Consensus 143 ~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~--- 219 (326)
T 3d7r_A 143 IDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQ--- 219 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHHHHHH---
T ss_pred chHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhhhccc---
Confidence 2335666677777777778889999999999999999999988776 9999999997764322110 00000
Q ss_pred hhhhhccCCCChHHHHHHhhhhhcc----CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEE
Q 024042 173 ERIDHLMLPESASQLRTLTGLAVSK----NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEI 245 (273)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~ 245 (273)
. .................. .....+.........|+|+++|++|..+ .....+.+.+ +.++++++
T Consensus 220 ----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~--~~~~~~~~~l~~~~~~~~~~~ 291 (326)
T 3d7r_A 220 ----D--AVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMTH--PDMKLFEQMMLQHHQYIEFYD 291 (326)
T ss_dssp ----C--SSCCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEE
T ss_pred ----C--cccCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCcccch--HHHHHHHHHHHHCCCcEEEEE
Confidence 0 000111111111110000 0000110000011239999999999754 3344444433 36789999
Q ss_pred eCCCCCCcCc---CChhhHHHHHHHHhcccC
Q 024042 246 IENTSHVPQI---ENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 246 ~~~~gH~~~~---~~~~~~~~~i~~fl~~~l 273 (273)
+++++|.++. ++++++.+.+.+||++++
T Consensus 292 ~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l 322 (326)
T 3d7r_A 292 YPKMVHDFPIYPIRQSHKAIKQIAKSIDEDV 322 (326)
T ss_dssp ETTCCTTGGGSSSHHHHHHHHHHHHHHTSCC
T ss_pred eCCCcccccccCCHHHHHHHHHHHHHHHHHh
Confidence 9999999877 778899999999998764
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8.6e-26 Score=175.42 Aligned_cols=239 Identities=15% Similarity=0.131 Sum_probs=141.9
Q ss_pred CCCceeEEecCCcceEEeecCCccCC-CCCCCCCeEEEEcCCCC---ch-hHhHHHHHHhhc--CCCeEEeecCCCCCCC
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDD-HKTLKKPSLVLIHGFGP---EA-IWQWRKQVQFFA--PHFNVYVPDLIFFGHS 95 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~~~~~~vi~~hG~~~---~~-~~~~~~~~~~l~--~~~~v~~~d~~g~g~s 95 (273)
.++..+.+.+.++..+.+..+.|+.. ..+++.|+||++||++. +. ...|..++..|+ .++.|+++|+||++.+
T Consensus 51 ~~v~~~~v~~~~~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~ 130 (338)
T 2o7r_A 51 SPVLTKDLALNPLHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEH 130 (338)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTT
T ss_pred CCEEEEEEEecCCCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCC
Confidence 34566677765555555544433221 12356789999999762 22 134788888886 3599999999998765
Q ss_pred CCCCccccHHHHHHHHHHHHHH--------hCCccEEEEEeccchHHHHHHHHhCCc--------ccceEEEecCCCCCC
Q 024042 96 TTRSIQRTELFQAASLGKLLEK--------IGVERFSVVGTSYGGFVAYHMARMWPE--------RVEKVVIASSGVNMK 159 (273)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~l~G~S~Gg~~a~~~a~~~~~--------~v~~~v~~~~~~~~~ 159 (273)
..+ ...++..+.+..+.+. ++.++++|+|||+||.+|+.++.++|+ +++++|+++|.....
T Consensus 131 ~~~---~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~ 207 (338)
T 2o7r_A 131 RLP---AAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGS 207 (338)
T ss_dssp CTT---HHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCS
T ss_pred CCc---hHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCC
Confidence 432 1223333333333221 334789999999999999999999887 899999999877654
Q ss_pred CcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhc----c-CC---CCC------hhhHHhhhhccEEEEecCCCCCC
Q 024042 160 RGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVS----K-NL---DIV------PDFFFNDFVHDVLIVWGDQDQIF 225 (273)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~---~~~------~~~~~~~~~~p~l~i~g~~D~~~ 225 (273)
.......... . . ................. . .. ... ....+..+..|+|+++|++|.++
T Consensus 208 ~~~~~~~~~~-~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~ 279 (338)
T 2o7r_A 208 KRTGSELRLA-N-----D--SRLPTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMI 279 (338)
T ss_dssp SCCHHHHHTT-T-----C--SSSCHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTSTTH
T ss_pred cCChhhhccC-C-----C--cccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcch
Confidence 3322111100 0 0 00001111111110000 0 00 000 01122334459999999999998
Q ss_pred ChH--HHHHHHHHhcCCcEEEEeCCCCCCcCcCCh---hhHHHHHHHHhcccC
Q 024042 226 PLK--MATELKELLGKKARLEIIENTSHVPQIENP---GLFNSIVKNFLRGSL 273 (273)
Q Consensus 226 ~~~--~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~l 273 (273)
+.. ..+.+.+. +.++++++++++||.++..++ +++.+.+.+||++++
T Consensus 280 ~~~~~~~~~l~~~-~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 280 DRQMELAERLEKK-GVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp HHHHHHHHHHHHT-TCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHC-CCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhc
Confidence 732 12333332 367899999999999887777 789999999998753
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-25 Score=172.81 Aligned_cols=228 Identities=14% Similarity=0.041 Sum_probs=143.4
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCC---Cc-----
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTR---SI----- 100 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~---~~----- 100 (273)
.+...+|.++.++.+.|+.. .++.|+||++||++++. ..+.........+|.|+++|+||+|.|... ..
T Consensus 72 ~~~~~dg~~i~~~~~~P~~~--~~~~p~vv~~HG~g~~~-~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~~~ 148 (337)
T 1vlq_A 72 TFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGR-GFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGP 148 (337)
T ss_dssp EEECGGGCEEEEEEEEECCS--CSSEEEEEECCCTTCCC-CCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSS
T ss_pred EEEcCCCCEEEEEEEecCCC--CCCccEEEEEcCCCCCC-CCchhhcchhhCCCEEEEecCCCCCCcccCCCCccccccc
Confidence 44445888898887753221 34578999999988776 444333333445699999999999966432 00
Q ss_pred -----------------cccHHHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCC
Q 024042 101 -----------------QRTELFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 101 -----------------~~~~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
.+......+|+.++++.+ +.++++++|||+||.+++.++..+| +++++++.+|...
T Consensus 149 ~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~~~ 227 (337)
T 1vlq_A 149 VDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLC 227 (337)
T ss_dssp BCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSC
T ss_pred CCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCccc
Confidence 112335667777777666 3368999999999999999999998 5999999888654
Q ss_pred CCCcchHHHhhhhhhhhhhhcc--CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHH
Q 024042 158 MKRGDNEALVKRANLERIDHLM--LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKE 235 (273)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~ 235 (273)
...... ............... .+... ....... ....+.....++..|+|+++|++|.++|++..+.+.+
T Consensus 228 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~ 299 (337)
T 1vlq_A 228 HFRRAV-QLVDTHPYAEITNFLKTHRDKE---EIVFRTL----SYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYN 299 (337)
T ss_dssp CHHHHH-HHCCCTTHHHHHHHHHHCTTCH---HHHHHHH----HTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred CHHHHH-hcCCCcchHHHHHHHHhCchhH---HHHHHhh----hhccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHH
Confidence 311000 000000000000000 01111 0111000 0112334456667799999999999999999999999
Q ss_pred HhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 236 LLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 236 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+..++++++++++||.... .+..+.+.+||++
T Consensus 300 ~l~~~~~~~~~~~~gH~~~~---~~~~~~~~~fl~~ 332 (337)
T 1vlq_A 300 YYAGPKEIRIYPYNNHEGGG---SFQAVEQVKFLKK 332 (337)
T ss_dssp HCCSSEEEEEETTCCTTTTH---HHHHHHHHHHHHH
T ss_pred hcCCCcEEEEcCCCCCCCcc---hhhHHHHHHHHHH
Confidence 99446899999999999532 2344555555544
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-24 Score=165.75 Aligned_cols=231 Identities=16% Similarity=0.129 Sum_probs=148.9
Q ss_pred hCCCceeEEecCCcceEEeecCCccCCCCCCCCCe-EEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCCCCCCC
Q 024042 22 SAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPS-LVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHS 95 (273)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~-vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s 95 (273)
..+.+.+.+++ +|..+ |+..+ ..+.++ ||++||.+ ++. ..|..++..|.+ +|.|+++|+|+.+.+
T Consensus 55 ~~~~~~~~~~~-~g~~~-~~p~~------~~~~~~~vv~~HGgg~~~g~~-~~~~~~~~~la~~~g~~v~~~dyr~~~~~ 125 (322)
T 3k6k_A 55 AEGVELTLTDL-GGVPC-IRQAT------DGAGAAHILYFHGGGYISGSP-STHLVLTTQLAKQSSATLWSLDYRLAPEN 125 (322)
T ss_dssp CTTCEEEEEEE-TTEEE-EEEEC------TTCCSCEEEEECCSTTTSCCH-HHHHHHHHHHHHHHTCEEEEECCCCTTTS
T ss_pred CCCceEEEEEE-CCEeE-EecCC------CCCCCeEEEEEcCCcccCCCh-HHHHHHHHHHHHhcCCEEEEeeCCCCCCC
Confidence 34566777777 88888 43322 344566 99999966 566 778888888865 599999999998876
Q ss_pred CCCCccccHHHHHHHHHHHHHH-hCCccEEEEEeccchHHHHHHHHhCCcc----cceEEEecCCCCCCCcchHHHhhhh
Q 024042 96 TTRSIQRTELFQAASLGKLLEK-IGVERFSVVGTSYGGFVAYHMARMWPER----VEKVVIASSGVNMKRGDNEALVKRA 170 (273)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~----v~~~v~~~~~~~~~~~~~~~~~~~~ 170 (273)
..+ ...++..+.+..+.+. ++.++++|+|||+||.+|+.++.+.+++ ++++|+++|................
T Consensus 126 ~~~---~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~ 202 (322)
T 3k6k_A 126 PFP---AAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSNLAD 202 (322)
T ss_dssp CTT---HHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHHHTGG
T ss_pred CCc---hHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchhhccC
Confidence 433 2445555555555555 5668999999999999999999987765 9999999998876543221111000
Q ss_pred hhhhhhhccCCCChHHHHHHhhhhhcc----CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEE
Q 024042 171 NLERIDHLMLPESASQLRTLTGLAVSK----NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARL 243 (273)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~ 243 (273)
.................... .....+.........|+|+++|++|.+ .+.++.+.+.+ +.++++
T Consensus 203 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~--~~~~~~~~~~l~~~g~~~~l 273 (322)
T 3k6k_A 203 -------RDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEAL--LSDSTTLAERAGAAGVSVEL 273 (322)
T ss_dssp -------GCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTT--HHHHHHHHHHHHHTTCCEEE
T ss_pred -------CCCcCCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCcc--HHHHHHHHHHHHHCCCCEEE
Confidence 00011111222111111100 001111111111223999999999988 45556665555 467899
Q ss_pred EEeCCCCCCcCc-----CChhhHHHHHHHHhcccC
Q 024042 244 EIIENTSHVPQI-----ENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 244 ~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~l 273 (273)
+++++++|.+.. +.++++.+.+.+||++++
T Consensus 274 ~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (322)
T 3k6k_A 274 KIWPDMPHVFQMYGKFVNAADISIKEICHWISARI 308 (322)
T ss_dssp EEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTC
T ss_pred EEECCCccccccccccChHHHHHHHHHHHHHHHHH
Confidence 999999998654 346788999999998864
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.5e-25 Score=171.71 Aligned_cols=237 Identities=14% Similarity=0.025 Sum_probs=146.4
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhH--hHHHHHHhhcC-CCeEEeecCCCCCCCCCCC--
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIW--QWRKQVQFFAP-HFNVYVPDLIFFGHSTTRS-- 99 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~--~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~-- 99 (273)
..+..++|..+.++.+.++. ..++.|+||++||++ ++. . .|..+...|.+ ++.|+++|+||+|.+.+..
T Consensus 85 ~~~~~~~g~~l~~~v~~p~~--~~~~~p~vv~iHGgg~~~g~~-~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~~~~ 161 (361)
T 1jkm_A 85 ETILGVDGNEITLHVFRPAG--VEGVLPGLVYTHGGGMTILTT-DNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPF 161 (361)
T ss_dssp EEEECTTSCEEEEEEEEETT--CCSCEEEEEEECCSTTTSSCS-SSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCT
T ss_pred eeeecCCCCeEEEEEEeCCC--CCCCCeEEEEEcCCccccCCC-cccchhHHHHHHHhCCCEEEEEecCCCCCCCCCCCC
Confidence 34555577566666554221 112568999999977 665 5 78888888874 5999999999996543211
Q ss_pred --ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHh-----CCcccceEEEecCCCCCCCcchHHHhhh--h
Q 024042 100 --IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARM-----WPERVEKVVIASSGVNMKRGDNEALVKR--A 170 (273)
Q Consensus 100 --~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-----~~~~v~~~v~~~~~~~~~~~~~~~~~~~--~ 170 (273)
...+.....+++.+.++.++.++++++|||+||.+++.++.. +|++++++|++++............... .
T Consensus 162 ~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~~~~~~~ 241 (361)
T 1jkm_A 162 PSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTELP 241 (361)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHHCT
T ss_pred CccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccccccccccccCc
Confidence 112333445556666666677899999999999999999988 7878999999999876522111000000 0
Q ss_pred hhhhhhhccCCCChHHHHHHhhhhhccC-----CCCCh----hhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---c
Q 024042 171 NLERIDHLMLPESASQLRTLTGLAVSKN-----LDIVP----DFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---G 238 (273)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~----~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~ 238 (273)
....... ................... ....+ ...+..+. |+|+++|++|.+++ ..+.+++.+ +
T Consensus 242 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~G~~D~~~~--~~~~~~~~l~~~g 316 (361)
T 1jkm_A 242 SLVENDG--YFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAVNELDPLRD--EGIAFARRLARAG 316 (361)
T ss_dssp HHHHTTT--SSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEEETTCTTHH--HHHHHHHHHHHTT
T ss_pred chhhccC--cccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCC-ceEEEEcCcCcchh--hHHHHHHHHHHcC
Confidence 0000000 0111111221111111000 01111 12334444 99999999999987 555555554 3
Q ss_pred CCcEEEEeCCCCCCcC-c-----CCh-hhHHHHHHHHhccc
Q 024042 239 KKARLEIIENTSHVPQ-I-----ENP-GLFNSIVKNFLRGS 272 (273)
Q Consensus 239 ~~~~~~~~~~~gH~~~-~-----~~~-~~~~~~i~~fl~~~ 272 (273)
.+++++++++++|.++ . +.. +++.+.+.+||+++
T Consensus 317 ~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 357 (361)
T 1jkm_A 317 VDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 357 (361)
T ss_dssp CCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHh
Confidence 5779999999999876 3 334 77889999999763
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-24 Score=167.97 Aligned_cols=236 Identities=15% Similarity=0.052 Sum_probs=147.4
Q ss_pred CCceeEEe--cCCcc-eEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCCCCCCC
Q 024042 24 GLSSQTID--IDDET-TLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHS 95 (273)
Q Consensus 24 ~~~~~~~~--~~~g~-~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s 95 (273)
+++.+.++ ..+|. ++.++.+.|+. ..++.|+||++||++ ++. ..|..+...|.+ +|.|+++|+||+|.+
T Consensus 48 ~~~~~~~~i~~~~g~~~l~~~~~~P~~--~~~~~p~vv~~HGgg~~~g~~-~~~~~~~~~la~~~G~~Vv~~d~rg~~~~ 124 (323)
T 1lzl_A 48 GVSLRELSAPGLDGDPEVKIRFVTPDN--TAGPVPVLLWIHGGGFAIGTA-ESSDPFCVEVARELGFAVANVEYRLAPET 124 (323)
T ss_dssp TEEEEEEEECCSTTCCCEEEEEEEESS--CCSCEEEEEEECCSTTTSCCG-GGGHHHHHHHHHHHCCEEEEECCCCTTTS
T ss_pred CceEEEEEecCCCCCceeEEEEEecCC--CCCCCcEEEEECCCccccCCh-hhhHHHHHHHHHhcCcEEEEecCCCCCCC
Confidence 44444444 44564 56666554321 234568999999987 676 778888888875 499999999999998
Q ss_pred CCCCccccHHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCc----ccceEEEecCCCCCCCcchHHHhhh
Q 024042 96 TTRSIQRTELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPE----RVEKVVIASSGVNMKRGDNEALVKR 169 (273)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~~~~~~~~~~~~ 169 (273)
..+....+....++++.+.++.++. ++++++|||+||.+|+.++.++++ .++++++++|.......... ....
T Consensus 125 ~~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~-~~~~ 203 (323)
T 1lzl_A 125 TFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVS-MTNF 203 (323)
T ss_dssp CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHH-HHHC
T ss_pred CCCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCchh-HHHh
Confidence 7554333444555555555555555 689999999999999999988765 49999999998765432211 1100
Q ss_pred hhhhhhhhccCCCChHHHHHHhhhhhccC----------CCCChhhHHhhh--hccEEEEecCCCCCCChHHHHHHHHHh
Q 024042 170 ANLERIDHLMLPESASQLRTLTGLAVSKN----------LDIVPDFFFNDF--VHDVLIVWGDQDQIFPLKMATELKELL 237 (273)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~--~~p~l~i~g~~D~~~~~~~~~~~~~~~ 237 (273)
. . .................... ....+. ...++ ..|+++++|++|.++ +....+.+.+
T Consensus 204 ~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~-~~~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l 273 (323)
T 1lzl_A 204 V------D-TPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPS-RATDLTGLPPTYLSTMELDPLR--DEGIEYALRL 273 (323)
T ss_dssp S------S-CSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGG-GCSCCTTCCCEEEEEETTCTTH--HHHHHHHHHH
T ss_pred c------c-CCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcc-cCcccCCCChhheEECCcCCch--HHHHHHHHHH
Confidence 0 0 00011111111111111000 000111 00112 149999999999987 3444555444
Q ss_pred ---cCCcEEEEeCCCCCCcCc----CChhhHHHHHHHHhcccC
Q 024042 238 ---GKKARLEIIENTSHVPQI----ENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 238 ---~~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~~l 273 (273)
+.+++++++++++|.+.. +.++++.+.+.+||++.+
T Consensus 274 ~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l 316 (323)
T 1lzl_A 274 LQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGL 316 (323)
T ss_dssp HHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHT
T ss_pred HHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHh
Confidence 367899999999997543 235688899999998653
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-25 Score=159.70 Aligned_cols=177 Identities=15% Similarity=0.144 Sum_probs=126.6
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCC---CCCc---cccHHHHHHHHHHHHHH---h--
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHST---TRSI---QRTELFQAASLGKLLEK---I-- 118 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~---~~~~---~~~~~~~~~~~~~~~~~---~-- 118 (273)
.+.+++||++||+|++. ..|..+++.|... +.|+++|.+|++.-+ .... ....++..+.+..+++. .
T Consensus 19 ~~a~~~Vv~lHG~G~~~-~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i 97 (210)
T 4h0c_A 19 QRAKKAVVMLHGRGGTA-ADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEAQGI 97 (210)
T ss_dssp TTCSEEEEEECCTTCCH-HHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCcEEEEEeCCCCCH-HHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHHhCC
Confidence 45678999999999998 8888889988766 999999998865321 1111 12333334444444433 3
Q ss_pred CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKN 198 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (273)
+.++++++|+|+||.+|+.++.++|+++.+++.+++........... ...
T Consensus 98 ~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~~~~-------------~~~----------------- 147 (210)
T 4h0c_A 98 PAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELAIGN-------------YKG----------------- 147 (210)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCCGGG-------------CCB-----------------
T ss_pred ChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhhhhh-------------hhh-----------------
Confidence 34789999999999999999999999999999998755432210000 000
Q ss_pred CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 199 LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 199 ~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.....|++++||++|+++|.+..+.+.+.+ +.+++++++|+.||... ++++ +.+.+||.+
T Consensus 148 ---------~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~---~~el-~~i~~wL~k 210 (210)
T 4h0c_A 148 ---------DFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS---GDEI-QLVNNTILK 210 (210)
T ss_dssp ---------CCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC---HHHH-HHHHHTTTC
T ss_pred ---------hccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC---HHHH-HHHHHHHcC
Confidence 000129999999999999999888877766 45788999999999753 4444 678899875
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-25 Score=170.16 Aligned_cols=232 Identities=14% Similarity=0.043 Sum_probs=142.3
Q ss_pred CceeEEe--cCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCC
Q 024042 25 LSSQTID--IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTT 97 (273)
Q Consensus 25 ~~~~~~~--~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~ 97 (273)
.+.+.++ ..+| .+.++.+.|+ ..++.|+||++||++ ++. ..|..+...|++ +|.|+++|+||+|.+..
T Consensus 63 ~~~~~~~i~~~~~-~i~~~iy~P~---~~~~~p~vv~~HGGg~~~g~~-~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~ 137 (323)
T 3ain_A 63 GKIEDITIPGSET-NIKARVYYPK---TQGPYGVLVYYHGGGFVLGDI-ESYDPLCRAITNSCQCVTISVDYRLAPENKF 137 (323)
T ss_dssp SEEEEEEEECSSS-EEEEEEEECS---SCSCCCEEEEECCSTTTSCCT-TTTHHHHHHHHHHHTSEEEEECCCCTTTSCT
T ss_pred cEEEEEEecCCCC-eEEEEEEecC---CCCCCcEEEEECCCccccCCh-HHHHHHHHHHHHhcCCEEEEecCCCCCCCCC
Confidence 3444444 4355 6766655421 245678999999944 666 788899998886 69999999999998764
Q ss_pred CCccccHHHHHHHHHHHHHHh-CCccEEEEEeccchHHHHHHHHhCCccc---ceEEEecCCCCCCCcchHHHhhhhhhh
Q 024042 98 RSIQRTELFQAASLGKLLEKI-GVERFSVVGTSYGGFVAYHMARMWPERV---EKVVIASSGVNMKRGDNEALVKRANLE 173 (273)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~~~v---~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
+....+....++++.+..+.+ +.++++|+|||+||.+|+.++.+++++. +++|+++|........... .....
T Consensus 138 p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~~~~-~~~~~-- 214 (323)
T 3ain_A 138 PAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLITKSL-YDNGE-- 214 (323)
T ss_dssp THHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCCHHH-HHHSS--
T ss_pred cchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCCccH-HHhcc--
Confidence 432222222333333333333 4678999999999999999999888776 8999999887654332111 10000
Q ss_pred hhhhccCCCChHHHHHHhhhhhcc-----CCCCChhh-HHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEE
Q 024042 174 RIDHLMLPESASQLRTLTGLAVSK-----NLDIVPDF-FFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLE 244 (273)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~ 244 (273)
. .................. .....+.. .+..+ .|+|+++|+.|.+++ ....+++.+ +.+++++
T Consensus 215 ---~--~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l-~P~lii~G~~D~l~~--~~~~~a~~l~~ag~~~~~~ 286 (323)
T 3ain_A 215 ---G--FFLTREHIDWFGQQYLRSFADLLDFRFSPILADLNDL-PPALIITAEHDPLRD--QGEAYANKLLQSGVQVTSV 286 (323)
T ss_dssp ---S--SSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTC-CCEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEE
T ss_pred ---C--CCCCHHHHHHHHHHhCCCCcccCCcccCcccCcccCC-CHHHEEECCCCccHH--HHHHHHHHHHHcCCCEEEE
Confidence 0 000111111111111000 00001111 11111 399999999999873 444444444 3678999
Q ss_pred EeCCCCCCcCc-----CChhhHHHHHHHHhccc
Q 024042 245 IIENTSHVPQI-----ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 245 ~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~ 272 (273)
++++++|.+.. +.++++.+.+.+||++.
T Consensus 287 ~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 319 (323)
T 3ain_A 287 GFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKV 319 (323)
T ss_dssp EETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred EECCCccccccccCcCHHHHHHHHHHHHHHHHH
Confidence 99999998765 34578889999999764
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.8e-25 Score=185.87 Aligned_cols=234 Identities=14% Similarity=0.048 Sum_probs=158.6
Q ss_pred ceeEEecCCcceEEeecCCccCCC----CCCCCCeEEEEcCCCCch-hHhHHHHHHhhcCC-CeEEeecCCC---CCCCC
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDH----KTLKKPSLVLIHGFGPEA-IWQWRKQVQFFAPH-FNVYVPDLIF---FGHST 96 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~----~~~~~~~vi~~hG~~~~~-~~~~~~~~~~l~~~-~~v~~~d~~g---~g~s~ 96 (273)
+...+...+|.+++++.+.|+... .+++.|+||++||++++. ...|......|.+. |.|+++|+|| +|.+.
T Consensus 392 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~~ 471 (662)
T 3azo_A 392 QIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRAY 471 (662)
T ss_dssp EEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHHH
T ss_pred eEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHHH
Confidence 445566668889988887654321 235678999999987665 12677778888776 9999999999 66653
Q ss_pred CC-----CccccHHHHHHHHHHHHHH--hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhh-
Q 024042 97 TR-----SIQRTELFQAASLGKLLEK--IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVK- 168 (273)
Q Consensus 97 ~~-----~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~- 168 (273)
.. ....+.++..+.+..+++. ++.++++++|||+||.+++.++.. |++++++|+++|...... ...
T Consensus 472 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~-----~~~~ 545 (662)
T 3azo_A 472 RERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLG-----WADG 545 (662)
T ss_dssp HHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHH-----HHTT
T ss_pred HHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHH-----Hhcc
Confidence 21 1123466667777777766 456799999999999999998886 899999999988764321 100
Q ss_pred hh-h-hhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc---CCcEE
Q 024042 169 RA-N-LERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG---KKARL 243 (273)
Q Consensus 169 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~ 243 (273)
.. . ...+..............+. ...+.....++..|+|+++|++|..+|.+..+.+++.+. .++++
T Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 617 (662)
T 3azo_A 546 GTHDFESRYLDFLIGSFEEFPERYR--------DRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAY 617 (662)
T ss_dssp CSCGGGTTHHHHHTCCTTTCHHHHH--------HTCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEE
T ss_pred cccchhhHhHHHHhCCCccchhHHH--------hhChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 00 0 00000000000000111110 012334455667799999999999999999999999982 23599
Q ss_pred EEeCCCCCCcC-cCChhhHHHHHHHHhcccC
Q 024042 244 EIIENTSHVPQ-IENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 244 ~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~l 273 (273)
++++++||.+. .+++.++.+.+.+||++++
T Consensus 618 ~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 648 (662)
T 3azo_A 618 LSFEGEGHGFRRKETMVRALEAELSLYAQVF 648 (662)
T ss_dssp EEETTCCSSCCSHHHHHHHHHHHHHHHHHHT
T ss_pred EEECCCCCCCCChHHHHHHHHHHHHHHHHHh
Confidence 99999999864 3567788899999998754
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=190.69 Aligned_cols=231 Identities=16% Similarity=0.097 Sum_probs=156.1
Q ss_pred CceeEEecCCc-ceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHhHH-----HHHHhhcCC-CeEEeecCCCCCCC
Q 024042 25 LSSQTIDIDDE-TTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQWR-----KQVQFFAPH-FNVYVPDLIFFGHS 95 (273)
Q Consensus 25 ~~~~~~~~~~g-~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~~~-----~~~~~l~~~-~~v~~~d~~g~g~s 95 (273)
.+...++..+| .+++++.+.|+.....++.|+||++||++++. ...|. .+++.|++. |.|+++|+||+|.+
T Consensus 487 ~~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s 566 (741)
T 2ecf_A 487 VEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRR 566 (741)
T ss_dssp EEEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSS
T ss_pred cEEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCC
Confidence 45556667789 89999888654322234568999999987653 12343 567777555 99999999999997
Q ss_pred CCCCccc---cH-HHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHH
Q 024042 96 TTRSIQR---TE-LFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA 165 (273)
Q Consensus 96 ~~~~~~~---~~-~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~ 165 (273)
....... .. ....+|+.+.++.+ +.++++++|||+||.+++.++.++|++++++|+++|......... .
T Consensus 567 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-~ 645 (741)
T 2ecf_A 567 GRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDS-H 645 (741)
T ss_dssp CHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGSBH-H
T ss_pred ChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhhcc-c
Confidence 5321110 00 12234444444443 347899999999999999999999999999999998765432111 0
Q ss_pred HhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcE
Q 024042 166 LVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKAR 242 (273)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~ 242 (273)
... .+ . .........+.. ..+.....++..|+|+++|++|..++.+..+.+++.+ +.+.+
T Consensus 646 ~~~-----~~---~-~~~~~~~~~~~~--------~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 708 (741)
T 2ecf_A 646 YTE-----RY---M-DLPARNDAGYRE--------ARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFE 708 (741)
T ss_dssp HHH-----HH---H-CCTGGGHHHHHH--------HCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCE
T ss_pred cch-----hh---c-CCcccChhhhhh--------cCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceE
Confidence 000 00 0 000000011000 0222334566679999999999999999999998887 24569
Q ss_pred EEEeCCCCCCcCcCChhhHHHHHHHHhcccC
Q 024042 243 LEIIENTSHVPQIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 243 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 273 (273)
+++++++||.++.+.++++.+.+.+||+++|
T Consensus 709 ~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l 739 (741)
T 2ecf_A 709 LMTYPGAKHGLSGADALHRYRVAEAFLGRCL 739 (741)
T ss_dssp EEEETTCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCchhHHHHHHHHHHHHhc
Confidence 9999999999887777889999999998753
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-24 Score=159.86 Aligned_cols=177 Identities=20% Similarity=0.187 Sum_probs=129.8
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC------CeEEeecCCCCC-------------------CCCCCCccccHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH------FNVYVPDLIFFG-------------------HSTTRSIQRTEL 105 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~------~~v~~~d~~g~g-------------------~s~~~~~~~~~~ 105 (273)
.+..|+||++||++++. ..|..+...|... +.|+++|.++++ .+. .....+.+
T Consensus 20 ~~~~p~vv~lHG~g~~~-~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~ 97 (239)
T 3u0v_A 20 GRHSASLIFLHGSGDSG-QGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDC-PEHLESID 97 (239)
T ss_dssp SCCCEEEEEECCTTCCH-HHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSS-CCCHHHHH
T ss_pred CCCCcEEEEEecCCCch-hhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCccc-ccchhhHH
Confidence 45678999999999998 8888888777643 889998876431 111 12224667
Q ss_pred HHHHHHHHHHHHh-----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccC
Q 024042 106 FQAASLGKLLEKI-----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML 180 (273)
Q Consensus 106 ~~~~~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (273)
+.++++..+++.. +.++++|+|||+||.+|+.++.++|++++++|++++...........
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~--------------- 162 (239)
T 3u0v_A 98 VMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQA--------------- 162 (239)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHHHHH---------------
T ss_pred HHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHHHHH---------------
Confidence 7778888888763 56899999999999999999999999999999999876543211000
Q ss_pred CCChHHHHHHhhhhhccCCCCChhhHHhhhhcc-EEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcC
Q 024042 181 PESASQLRTLTGLAVSKNLDIVPDFFFNDFVHD-VLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIE 256 (273)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~ 256 (273)
. . ......| +++++|++|.++|.+.++.+.+.+ +.++++++++++||.+..
T Consensus 163 ---------~-~--------------~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~- 217 (239)
T 3u0v_A 163 ---------L-Q--------------KSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSK- 217 (239)
T ss_dssp ---------H-H--------------HCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCH-
T ss_pred ---------H-H--------------hhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCCH-
Confidence 0 0 0011125 999999999999998888888777 347899999999999863
Q ss_pred ChhhHHHHHHHHhccc
Q 024042 257 NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 257 ~~~~~~~~i~~fl~~~ 272 (273)
+..+.+.+||++.
T Consensus 218 ---~~~~~~~~~l~~~ 230 (239)
T 3u0v_A 218 ---TELDILKLWILTK 230 (239)
T ss_dssp ---HHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHh
Confidence 3345555666543
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=173.32 Aligned_cols=236 Identities=13% Similarity=0.009 Sum_probs=143.2
Q ss_pred CCceeEEecCCcceEEeecCCccCCC--------------CCCCCCeEEEEcCCCC---ch-hHhHHHHHHhhc-C-CCe
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDH--------------KTLKKPSLVLIHGFGP---EA-IWQWRKQVQFFA-P-HFN 83 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~--------------~~~~~~~vi~~hG~~~---~~-~~~~~~~~~~l~-~-~~~ 83 (273)
++..+.+.+.++..+.++.+.|+... ..++.|+||++||++. +. ...|..++..|+ + +|.
T Consensus 69 ~v~~~dv~~~~~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~ 148 (351)
T 2zsh_A 69 GVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCV 148 (351)
T ss_dssp TEEEEEEEEETTTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSE
T ss_pred CceEEEEEecCCCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCE
Confidence 34555666544545555444333221 2346789999999553 22 133888888887 3 499
Q ss_pred EEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH------hCCc-cEEEEEeccchHHHHHHHHhCCc---ccceEEEec
Q 024042 84 VYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK------IGVE-RFSVVGTSYGGFVAYHMARMWPE---RVEKVVIAS 153 (273)
Q Consensus 84 v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~------~~~~-~i~l~G~S~Gg~~a~~~a~~~~~---~v~~~v~~~ 153 (273)
|+++|+||.+.+..+ ...++..+.+..+.+. ++.+ +++|+|||+||.+|+.++.++++ +++++|+++
T Consensus 149 vv~~d~rg~~~~~~~---~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~ 225 (351)
T 2zsh_A 149 VVSVNYRRAPENPYP---CAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLN 225 (351)
T ss_dssp EEEECCCCTTTSCTT---HHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEES
T ss_pred EEEecCCCCCCCCCc---hhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEEC
Confidence 999999998765432 2333434444444332 3456 99999999999999999999888 899999999
Q ss_pred CCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhc----cC-CCCCh----hhHHhhhhc-cEEEEecCCCC
Q 024042 154 SGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVS----KN-LDIVP----DFFFNDFVH-DVLIVWGDQDQ 223 (273)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~----~~~~~~~~~-p~l~i~g~~D~ 223 (273)
|............. ... .. ................ .. ....+ ...+.++.. |+|+++|++|.
T Consensus 226 p~~~~~~~~~~~~~-~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP~Lii~G~~D~ 297 (351)
T 2zsh_A 226 PMFGGNERTESEKS-LDG-----KY--FVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDL 297 (351)
T ss_dssp CCCCCSSCCHHHHH-HTT-----TS--SCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCEEEEEEETTST
T ss_pred CccCCCcCChhhhh-cCC-----Cc--ccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhCCCCCEEEEEcCCCc
Confidence 88765432211110 000 00 0011111111111100 00 00000 011222333 99999999999
Q ss_pred CCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCc----CChhhHHHHHHHHhccc
Q 024042 224 IFPLKMATELKELL---GKKARLEIIENTSHVPQI----ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 224 ~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~~ 272 (273)
+++ ..+.+.+.+ +.++++++++++||.++. ++++++.+.+.+||+++
T Consensus 298 ~~~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~~ 351 (351)
T 2zsh_A 298 IRD--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNAE 351 (351)
T ss_dssp THH--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC-
T ss_pred chH--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 875 334444444 358999999999998776 77889999999999863
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-25 Score=163.97 Aligned_cols=170 Identities=16% Similarity=0.100 Sum_probs=130.0
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHH--------HhCCccE
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLE--------KIGVERF 123 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i 123 (273)
+.|+|||+||++++. ..|..+++.|.+. |.|+++|+||.+ ...+.....+.+.+... .++.+++
T Consensus 48 ~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~~s~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i 120 (258)
T 2fx5_A 48 RHPVILWGNGTGAGP-STYAGLLSHWASHGFVVAAAETSNAG------TGREMLACLDYLVRENDTPYGTYSGKLNTGRV 120 (258)
T ss_dssp CEEEEEEECCTTCCG-GGGHHHHHHHHHHTCEEEEECCSCCT------TSHHHHHHHHHHHHHHHSSSSTTTTTEEEEEE
T ss_pred CceEEEEECCCCCCc-hhHHHHHHHHHhCCeEEEEecCCCCc------cHHHHHHHHHHHHhcccccccccccccCccce
Confidence 668999999999988 8999999999775 999999999531 11233333444444332 3345789
Q ss_pred EEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCCh
Q 024042 124 SVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVP 203 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (273)
+++||||||.+++.++ .+.++++++++++...... ..
T Consensus 121 ~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~~-----------------------------------------~~ 157 (258)
T 2fx5_A 121 GTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGLG-----------------------------------------HD 157 (258)
T ss_dssp EEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSSTT-----------------------------------------CC
T ss_pred EEEEEChHHHHHHHhc--cCcCeEEEEEecCcccccc-----------------------------------------cc
Confidence 9999999999999988 4567999999987443100 00
Q ss_pred hhHHhhhhccEEEEecCCCCCCChHH-HHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 204 DFFFNDFVHDVLIVWGDQDQIFPLKM-ATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 204 ~~~~~~~~~p~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
......+..|+|+++|++|.+++.+. .+.+.+..+.++++++++++||+.+.++++++.+.+.+||+++
T Consensus 158 ~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~~~ 227 (258)
T 2fx5_A 158 SASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSHFEPVGSGGAYRGPSTAWFRFQ 227 (258)
T ss_dssp GGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEEEEEESSCCTTSSTTTCGGGHHHHHHHHHHH
T ss_pred hhhhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeEEEEECCCCCccccchHHHHHHHHHHHHHHH
Confidence 11234455699999999999999986 7888777645799999999999999999999999999999854
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-24 Score=161.66 Aligned_cols=203 Identities=14% Similarity=0.074 Sum_probs=128.8
Q ss_pred CceeEEecC-CcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc
Q 024042 25 LSSQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ 101 (273)
Q Consensus 25 ~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~ 101 (273)
++++.+.++ ||.+|..+.+.| ...++.|.||++||++++. ...+..+++.|++. |.|+++|+||+|.|......
T Consensus 29 ~~e~~~~~~~dG~~i~g~l~~P---~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~ 105 (259)
T 4ao6_A 29 VQERGFSLEVDGRTVPGVYWSP---AEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAG 105 (259)
T ss_dssp EEEEEEEEEETTEEEEEEEEEE---SSSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC----------
T ss_pred ceEEEEEEeeCCeEEEEEEEeC---CCCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccc
Confidence 344555543 999998877753 2345568899999998775 13567788888877 99999999999988643321
Q ss_pred c-------------------cHHHHHHHHHHHH----HHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 102 R-------------------TELFQAASLGKLL----EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 102 ~-------------------~~~~~~~~~~~~~----~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
. .......+....+ ...+.+++.++|+|+||.+++.++...|+ ++++++..++...
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~ 184 (259)
T 4ao6_A 106 REPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEG 184 (259)
T ss_dssp ---CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTS
T ss_pred cccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEecccccc
Confidence 0 0111122333333 33467899999999999999999999875 7777765443322
Q ss_pred CCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc
Q 024042 159 KRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG 238 (273)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~ 238 (273)
... . .+.....++..|+|+++|++|.++|++.++.+++.++
T Consensus 185 ~~~-----------------------~----------------~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~ 225 (259)
T 4ao6_A 185 VNG-----------------------E----------------DLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLG 225 (259)
T ss_dssp TTH-----------------------H----------------HHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCC
T ss_pred ccc-----------------------c----------------chhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhC
Confidence 110 0 0111233455699999999999999999999999984
Q ss_pred -CCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcccC
Q 024042 239 -KKARLEIIENTSHVPQIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 239 -~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 273 (273)
++.++++++ ++|... ...+..+.+.+||+++|
T Consensus 226 ~~~k~l~~~~-G~H~~~--p~~e~~~~~~~fl~~hL 258 (259)
T 4ao6_A 226 TKQKTLHVNP-GKHSAV--PTWEMFAGTVDYLDQRL 258 (259)
T ss_dssp CSSEEEEEES-SCTTCC--CHHHHTHHHHHHHHHHC
T ss_pred CCCeEEEEeC-CCCCCc--CHHHHHHHHHHHHHHhc
Confidence 556788888 577532 12466778889998875
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-25 Score=178.38 Aligned_cols=236 Identities=13% Similarity=0.080 Sum_probs=143.3
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
.+.+.+| .+..+.+.| ++.++.|+||++||++++. . ...+..|++. |.|+++|+||+|.+.........++.
T Consensus 137 ~~~~~~~-~l~~~l~~P---~~~~~~P~Vv~~hG~~~~~-~--~~~a~~La~~Gy~V~a~D~rG~g~~~~~~~~~~~~d~ 209 (422)
T 3k2i_A 137 RQSVRAG-RVRATLFLP---PGPGPFPGIIDIFGIGGGL-L--EYRASLLAGHGFATLALAYYNFEDLPNNMDNISLEYF 209 (422)
T ss_dssp EEEEEET-TEEEEEEEC---SSSCCBCEEEEECCTTCSC-C--CHHHHHHHTTTCEEEEEECSSSTTSCSSCSCEETHHH
T ss_pred EEEEeCC-cEEEEEEcC---CCCCCcCEEEEEcCCCcch-h--HHHHHHHHhCCCEEEEEccCCCCCCCCCcccCCHHHH
Confidence 4444333 455444432 2245679999999987764 2 3346777766 99999999999988766555566665
Q ss_pred HHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhh-h-hhhhh-ccCCC
Q 024042 108 AASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRAN-L-ERIDH-LMLPE 182 (273)
Q Consensus 108 ~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~-~~~~~ 182 (273)
.+.+..+.+.. +.++++++|||+||.+|+.++.++|+ ++++|++++................. . ..... .....
T Consensus 210 ~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (422)
T 3k2i_A 210 EEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFS 288 (422)
T ss_dssp HHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGCEECTT
T ss_pred HHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhcccCcc
Confidence 55555554443 34799999999999999999999997 99999998876432211000000000 0 00000 00000
Q ss_pred ChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHH-HHHHHHh---cC-CcEEEEeCCCCCCcC---
Q 024042 183 SASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMA-TELKELL---GK-KARLEIIENTSHVPQ--- 254 (273)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~-~~~~~~~---~~-~~~~~~~~~~gH~~~--- 254 (273)
............... ..........++..|+|+++|++|.++|.+.. +.+.+.+ +. +.++++++++||.+.
T Consensus 289 ~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~~p~ 367 (422)
T 3k2i_A 289 GLVDIVDIRNALVGG-YKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEPPY 367 (422)
T ss_dssp SCEECTTCBCCCTTG-GGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCCSTT
T ss_pred hhHHHHHHHhhhhhc-ccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEECCCC
Confidence 000000000000000 00011112456677999999999999998754 5666555 23 389999999999862
Q ss_pred -------------------------cCChhhHHHHHHHHhcccC
Q 024042 255 -------------------------IENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 255 -------------------------~~~~~~~~~~i~~fl~~~l 273 (273)
.+.++++.+.+.+||+++|
T Consensus 368 ~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L 411 (422)
T 3k2i_A 368 FPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHL 411 (422)
T ss_dssp CCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhc
Confidence 2446778899999998764
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.5e-25 Score=160.93 Aligned_cols=185 Identities=16% Similarity=0.158 Sum_probs=135.2
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCC---CCCCC------CccccH
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFG---HSTTR------SIQRTE 104 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g---~s~~~------~~~~~~ 104 (273)
++..++|...+ +....+|+||++||++++. ..|..+.+.|.++|.|+++|.+++. .+... ....+.
T Consensus 14 ~~~~l~~~~~~----~~~~~~p~vv~lHG~g~~~-~~~~~~~~~l~~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~ 88 (223)
T 3b5e_A 14 TDLAFPYRLLG----AGKESRECLFLLHGSGVDE-TTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSI 88 (223)
T ss_dssp CSSSSCEEEES----TTSSCCCEEEEECCTTBCT-TTTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHH
T ss_pred cCCCceEEEeC----CCCCCCCEEEEEecCCCCH-HHHHHHHHhcCCCceEEEeCCCCCcCCccccccccCCCcccHHHH
Confidence 56677777765 2234569999999999998 8899999999888999999987631 11100 111234
Q ss_pred HHHHHHHHHHHHHh----C--CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhc
Q 024042 105 LFQAASLGKLLEKI----G--VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHL 178 (273)
Q Consensus 105 ~~~~~~~~~~~~~~----~--~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (273)
...++++.++++.+ + .++++++|||+||.+|+.++.++|++++++|++++.......
T Consensus 89 ~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~----------------- 151 (223)
T 3b5e_A 89 LAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHV----------------- 151 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSC-----------------
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcccc-----------------
Confidence 45556666665544 3 378999999999999999999999999999999986543210
Q ss_pred cCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc---CCcEEEEeCCCCCCcCc
Q 024042 179 MLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG---KKARLEIIENTSHVPQI 255 (273)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~ 255 (273)
.. ......|+++++|++|.++|.+..+ +.+.+. .++++++++ +||....
T Consensus 152 ------------------~~--------~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~ 203 (223)
T 3b5e_A 152 ------------------PA--------TDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGD 203 (223)
T ss_dssp ------------------CC--------CCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCH
T ss_pred ------------------cc--------ccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCH
Confidence 00 0112349999999999999999888 887772 268999999 9999754
Q ss_pred CChhhHHHHHHHHhccc
Q 024042 256 ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 256 ~~~~~~~~~i~~fl~~~ 272 (273)
+ ..+.+.+||++.
T Consensus 204 ~----~~~~i~~~l~~~ 216 (223)
T 3b5e_A 204 P----DAAIVRQWLAGP 216 (223)
T ss_dssp H----HHHHHHHHHHCC
T ss_pred H----HHHHHHHHHHhh
Confidence 3 345777888764
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-25 Score=188.06 Aligned_cols=231 Identities=18% Similarity=0.115 Sum_probs=155.3
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHhH--HHHHHhhcC-CCeEEeecCCCCCCCCC-
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQW--RKQVQFFAP-HFNVYVPDLIFFGHSTT- 97 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~~--~~~~~~l~~-~~~v~~~d~~g~g~s~~- 97 (273)
..+...++..+| ++.++.+.|+.....++.|+||++||++++. ...| ......+++ +|.|+++|+||+|.+..
T Consensus 467 ~~~~~~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~ 545 (723)
T 1xfd_A 467 KVEYRDIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTK 545 (723)
T ss_dssp BCCBCCEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHH
T ss_pred CceEEEEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHH
Confidence 345566777788 8988887654322345678999999987652 1223 245566764 59999999999998421
Q ss_pred ------C-CccccHHHHHHHHHHHHHH--hCCccEEEEEeccchHHHHHHHHhC----CcccceEEEecCCCCCCCcchH
Q 024042 98 ------R-SIQRTELFQAASLGKLLEK--IGVERFSVVGTSYGGFVAYHMARMW----PERVEKVVIASSGVNMKRGDNE 164 (273)
Q Consensus 98 ------~-~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~----~~~v~~~v~~~~~~~~~~~~~~ 164 (273)
. ......++..+.+..+.+. ++.++++++|||+||.+|+.++.++ |++++++|++++.........
T Consensus 546 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~- 624 (723)
T 1xfd_A 546 LLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYAS- 624 (723)
T ss_dssp HHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBH-
T ss_pred HHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhhh-
Confidence 1 1112334444444433322 1346899999999999999999999 999999999998766443211
Q ss_pred HHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhh-ccEEEEecCCCCCCChHHHHHHHHHh---cCC
Q 024042 165 ALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV-HDVLIVWGDQDQIFPLKMATELKELL---GKK 240 (273)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~ 240 (273)
..... ... .+... ........+.....++. .|+|+++|++|..+|.+.++.+++.+ +.+
T Consensus 625 ~~~~~-----~~~--~~~~~----------~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~ 687 (723)
T 1xfd_A 625 AFSER-----YLG--LHGLD----------NRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKAN 687 (723)
T ss_dssp HHHHH-----HHC--CCSSC----------CSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCC
T ss_pred hccHh-----hcC--CccCC----------hhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCC
Confidence 00000 000 00000 00001112334556676 69999999999999999999888877 357
Q ss_pred cEEEEeCCCCCCc-CcCChhhHHHHHHHHhcccC
Q 024042 241 ARLEIIENTSHVP-QIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 241 ~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~l 273 (273)
++++++|++||.+ ..++++++.+.+.+||+++|
T Consensus 688 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 721 (723)
T 1xfd_A 688 YSLQIYPDESHYFTSSSLKQHLYRSIINFFVECF 721 (723)
T ss_dssp CEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTT
T ss_pred eEEEEECCCCcccccCcchHHHHHHHHHHHHHHh
Confidence 8999999999997 56778899999999999875
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-25 Score=177.96 Aligned_cols=215 Identities=14% Similarity=0.140 Sum_probs=134.3
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC--CccEEEEE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG--VERFSVVG 127 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~G 127 (273)
.++.|+||++||++++. ..+ .+..|++. |.|+++|+||+|.+.........++..+.+..+.+..+ .++++|+|
T Consensus 171 ~~~~P~Vv~lhG~~~~~-~~~--~a~~La~~Gy~Vla~D~rG~~~~~~~~~~~~~~d~~~a~~~l~~~~~vd~~~i~l~G 247 (446)
T 3hlk_A 171 PGPFPGIVDMFGTGGGL-LEY--RASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLG 247 (446)
T ss_dssp SCCBCEEEEECCSSCSC-CCH--HHHHHHTTTCEEEEECCSSSTTSCSCCSEEEHHHHHHHHHHHHTSTTBCCSSEEEEE
T ss_pred CCCCCEEEEECCCCcch-hhH--HHHHHHhCCCEEEEeccCCCCCCCcchhhCCHHHHHHHHHHHHhCCCCCCCCEEEEE
Confidence 45678999999988754 323 36777766 99999999999988766555566666555555554443 37999999
Q ss_pred eccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhh---hhhhhhhhhccCCCChHHHHHHhhhhhccCCCC---
Q 024042 128 TSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVK---RANLERIDHLMLPESASQLRTLTGLAVSKNLDI--- 201 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 201 (273)
|||||.+|+.++..+|+ ++++|++++.............. ................... ...+......
T Consensus 248 ~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 322 (446)
T 3hlk_A 248 ISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTKDGYADI----VDVLNSPLEGPDQ 322 (446)
T ss_dssp ETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGCEECSSSCEEC----TTCBCCTTSGGGG
T ss_pred ECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhccccccchHHHH----HHHHhchhhcccc
Confidence 99999999999999987 99999998865432211000000 0000000000000000000 0000000000
Q ss_pred ChhhHHhhhhccEEEEecCCCCCCChHH-HHHHHHHh---cCC-cEEEEeCCCCCCcC----------------------
Q 024042 202 VPDFFFNDFVHDVLIVWGDQDQIFPLKM-ATELKELL---GKK-ARLEIIENTSHVPQ---------------------- 254 (273)
Q Consensus 202 ~~~~~~~~~~~p~l~i~g~~D~~~~~~~-~~~~~~~~---~~~-~~~~~~~~~gH~~~---------------------- 254 (273)
.......++..|+|+++|++|.++|.+. .+.+.+.+ +.. +++++++++||.+.
T Consensus 323 ~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~g 402 (446)
T 3hlk_A 323 KSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWG 402 (446)
T ss_dssp GGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCSTTCCCCCBC-------CBBCC
T ss_pred ccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECCCCCCCChhhcccccCceEeeC
Confidence 0011145566799999999999999844 35666555 233 89999999999872
Q ss_pred ------cCChhhHHHHHHHHhcccC
Q 024042 255 ------IENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 255 ------~~~~~~~~~~i~~fl~~~l 273 (273)
.+.++++.+.+.+||+++|
T Consensus 403 G~~~~~~~a~~~~~~~i~~Fl~~~L 427 (446)
T 3hlk_A 403 GEPRAHAMAQVDAWKQLQTFFHKHL 427 (446)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhh
Confidence 1225678899999998764
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-25 Score=170.33 Aligned_cols=230 Identities=14% Similarity=0.088 Sum_probs=140.4
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcC---CCCchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCccc
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHG---FGPEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQR 102 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG---~~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~ 102 (273)
.++...+| ++.++.+.|+.. .++.|+||++|| ++++. ..|..++..|++ +|.|+++|+||+|.+..+....
T Consensus 51 ~~i~~~~g-~l~~~~~~P~~~--~~~~p~vv~~HGGg~~~g~~-~~~~~~~~~la~~~g~~v~~~d~rg~~~~~~~~~~~ 126 (310)
T 2hm7_A 51 FDMDLPGR-TLKVRMYRPEGV--EPPYPALVYYHGGSWVVGDL-ETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVE 126 (310)
T ss_dssp EEEEETTE-EEEEEEEECTTC--CSSEEEEEEECCSTTTSCCT-TTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHH
T ss_pred EEeccCCC-eEEEEEEecCCC--CCCCCEEEEECCCccccCCh-hHhHHHHHHHHHhcCCEEEEeCCCCCCCCCCCccHH
Confidence 34445466 777776653211 345789999999 66777 788888888876 4999999999999875432212
Q ss_pred cHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCc----ccceEEEecCCCCCC--CcchHHHhhhhhhhh
Q 024042 103 TELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPE----RVEKVVIASSGVNMK--RGDNEALVKRANLER 174 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~~--~~~~~~~~~~~~~~~ 174 (273)
+.....+++.+..+.+ +.++++++|||+||.+|+.++.++++ +++++|+++|..... .... ......
T Consensus 127 d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~-~~~~~~---- 201 (310)
T 2hm7_A 127 DAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPA-SIEENA---- 201 (310)
T ss_dssp HHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTSCCH-HHHHTS----
T ss_pred HHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCcccCCc-chhhcC----
Confidence 2222222222222222 23789999999999999999998776 699999999987654 2111 111000
Q ss_pred hhhccCCCChHHHHHHhhhhhcc-----CCCCChhh--HHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEE
Q 024042 175 IDHLMLPESASQLRTLTGLAVSK-----NLDIVPDF--FFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLE 244 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~ 244 (273)
.. .................. .....+.. .+..+ .|+++++|++|.++ +..+.+.+.+ +.+++++
T Consensus 202 -~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~~--~~~~~~~~~l~~~g~~~~~~ 275 (310)
T 2hm7_A 202 -EG--YLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGL-PPAYIATAQYDPLR--DVGKLYAEALNKAGVKVEIE 275 (310)
T ss_dssp -SS--SSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTC-CCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEE
T ss_pred -CC--CCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCC-CCEEEEEecCCCch--HHHHHHHHHHHHCCCCEEEE
Confidence 00 000111111111111000 00001110 01111 29999999999987 4455555554 3568999
Q ss_pred EeCCCCCCcCc-----CChhhHHHHHHHHhccc
Q 024042 245 IIENTSHVPQI-----ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 245 ~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~ 272 (273)
++++++|.+.. +.++++.+.+.+||+++
T Consensus 276 ~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 308 (310)
T 2hm7_A 276 NFEDLIHGFAQFYSLSPGATKALVRIAEKLRDA 308 (310)
T ss_dssp EEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCccchhhhcccChHHHHHHHHHHHHHHHH
Confidence 99999996543 45678899999999865
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=167.69 Aligned_cols=226 Identities=12% Similarity=0.023 Sum_probs=138.8
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCccc
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQR 102 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~ 102 (273)
.++...+| .+.++.+.| .....|+||++||++ ++. ..|..+...|++ +|.|+++|+|+.+....+.
T Consensus 66 ~~~~~~~g-~i~~~~~~p----~~~~~p~vv~~HGgg~~~g~~-~~~~~~~~~la~~~g~~V~~~dyr~~p~~~~~~--- 136 (326)
T 3ga7_A 66 CAVPTPYG-DVTTRLYSP----QPTSQATLYYLHGGGFILGNL-DTHDRIMRLLARYTGCTVIGIDYSLSPQARYPQ--- 136 (326)
T ss_dssp EEECCTTS-CEEEEEEES----SSSCSCEEEEECCSTTTSCCT-TTTHHHHHHHHHHHCSEEEEECCCCTTTSCTTH---
T ss_pred EEeecCCC-CeEEEEEeC----CCCCCcEEEEECCCCcccCCh-hhhHHHHHHHHHHcCCEEEEeeCCCCCCCCCCc---
Confidence 34444567 677766652 233459999999988 777 788888888887 6999999999876654332
Q ss_pred cHHHHHHHHHHHHHH---h--CCccEEEEEeccchHHHHHHHHhCCcc------cceEEEecCCCCCCCcchHHHhhhhh
Q 024042 103 TELFQAASLGKLLEK---I--GVERFSVVGTSYGGFVAYHMARMWPER------VEKVVIASSGVNMKRGDNEALVKRAN 171 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~---~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~------v~~~v~~~~~~~~~~~~~~~~~~~~~ 171 (273)
..++..+.+..+.+. + +.++++++|+|+||.+|+.++.+.+++ +++++++.+..............
T Consensus 137 ~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~--- 213 (326)
T 3ga7_A 137 AIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSRRLFG--- 213 (326)
T ss_dssp HHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHHHHHCC---
T ss_pred HHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChhHhhhc---
Confidence 223323333333322 2 336899999999999999999887764 89999998876544321111000
Q ss_pred hhhhhhccCCCChHHHHHHhhhhhccC-----CCCCh-hhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcE
Q 024042 172 LERIDHLMLPESASQLRTLTGLAVSKN-----LDIVP-DFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKAR 242 (273)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~ 242 (273)
...................... ....+ .....+...|+++++|+.|.++ +....+++.+ +..++
T Consensus 214 -----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~ 286 (326)
T 3ga7_A 214 -----GAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLI--DDSRLLHQTLQAHQQPCE 286 (326)
T ss_dssp -----CTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH--HHHHHHHHHHHHTTCCEE
T ss_pred -----CCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCH--HHHHHHHHHHHHCCCcEE
Confidence 0000111111111111111000 00000 0011123349999999999997 3555555554 35789
Q ss_pred EEEeCCCCCCcCc-----CChhhHHHHHHHHhccc
Q 024042 243 LEIIENTSHVPQI-----ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 243 ~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~ 272 (273)
++++++++|.+.. +..+++.+.+.+||+++
T Consensus 287 ~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 321 (326)
T 3ga7_A 287 YKMYPGTLHAFLHYSRMMTIADDALQDGARFFMAR 321 (326)
T ss_dssp EEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHH
Confidence 9999999998743 23578888999999865
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-23 Score=160.14 Aligned_cols=233 Identities=15% Similarity=0.150 Sum_probs=142.4
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCC
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTR 98 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~ 98 (273)
+++.+.++. ++..++++... ..++.|+||++||.+ ++. ..|..+...|.. ++.|+++|+|+.+....+
T Consensus 56 ~~~~~~~~~-~~i~~~~~~p~-----~~~~~p~vv~~HGGg~~~g~~-~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~ 128 (322)
T 3fak_A 56 DIQVEQVTV-AGCAAEWVRAP-----GCQAGKAILYLHGGGYVMGSI-NTHRSMVGEISRASQAAALLLDYRLAPEHPFP 128 (322)
T ss_dssp TCEEEEEEE-TTEEEEEEECT-----TCCTTCEEEEECCSTTTSCCH-HHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT
T ss_pred CeeEEEEee-CCeEEEEEeCC-----CCCCccEEEEEcCCccccCCh-HHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCC
Confidence 344555555 56555555432 235689999999966 455 677777777765 599999999987655422
Q ss_pred CccccHHHHHHHHHHHHHH-hCCccEEEEEeccchHHHHHHHHhCCcc----cceEEEecCCCCCCCcchHHHhhhhhhh
Q 024042 99 SIQRTELFQAASLGKLLEK-IGVERFSVVGTSYGGFVAYHMARMWPER----VEKVVIASSGVNMKRGDNEALVKRANLE 173 (273)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~----v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
...++..+.+..+.+. ++.++++|+|||+||.+|+.++.+.+++ ++++|+++|................
T Consensus 129 ---~~~~D~~~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~--- 202 (322)
T 3fak_A 129 ---AAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAE--- 202 (322)
T ss_dssp ---HHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHHTTT---
T ss_pred ---cHHHHHHHHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHHhCc---
Confidence 2445555555555555 4557999999999999999999887665 9999999998876543221111100
Q ss_pred hhhhccCCCChHHH-HHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCC
Q 024042 174 RIDHLMLPESASQL-RTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENT 249 (273)
Q Consensus 174 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 249 (273)
....+........ ..+............+.........|+|+++|+.|.++ +....+++.+ +.++++++++++
T Consensus 203 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~ 279 (322)
T 3fak_A 203 -ADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVLL--DDSIKLDAKAKADGVKSTLEIWDDM 279 (322)
T ss_dssp -TCCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTC
T ss_pred -cCcccCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCccH--HHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 0000011111111 11111000000011111111111239999999999874 4555665555 467899999999
Q ss_pred CCCcCc-----CChhhHHHHHHHHhccc
Q 024042 250 SHVPQI-----ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 250 gH~~~~-----~~~~~~~~~i~~fl~~~ 272 (273)
+|.+.. +..+++.+.+.+||+++
T Consensus 280 ~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 307 (322)
T 3fak_A 280 IHVWHAFHPMLPEGKQAIVRVGEFMREQ 307 (322)
T ss_dssp CTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred eeehhhccCCCHHHHHHHHHHHHHHHHH
Confidence 997653 33578888899999864
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.8e-23 Score=154.36 Aligned_cols=229 Identities=11% Similarity=0.147 Sum_probs=141.2
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhH-HHHHHhhcCC-CeEEeecCCCCCCCCCCCccc
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQW-RKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQR 102 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~-~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~ 102 (273)
..+++.+|.+++++... ..+.|+||++||+| ++. ..| ......+.+. +.|+++|+|+.++.
T Consensus 7 ~~~~~~~~~~~~~y~p~------~~~~p~iv~~HGGg~~~g~~-~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~------- 72 (274)
T 2qru_A 7 NNQTLANGATVTIYPTT------TEPTNYVVYLHGGGMIYGTK-SDLPEELKELFTSNGYTVLALDYLLAPNT------- 72 (274)
T ss_dssp EEEECTTSCEEEEECCS------SSSCEEEEEECCSTTTSCCG-GGCCHHHHHHHHTTTEEEEEECCCCTTTS-------
T ss_pred ccccccCCeeEEEEcCC------CCCCcEEEEEeCccccCCCh-hhchHHHHHHHHHCCCEEEEeCCCCCCCC-------
Confidence 46666689888887642 25678999999987 555 444 5566667665 99999999975532
Q ss_pred cHHHHHHHHHHHHHHh----C-CccEEEEEeccchHHHHHHHH---hCCcccceEEEecCCCCCCCcchHHH--hhhhhh
Q 024042 103 TELFQAASLGKLLEKI----G-VERFSVVGTSYGGFVAYHMAR---MWPERVEKVVIASSGVNMKRGDNEAL--VKRANL 172 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~----~-~~~i~l~G~S~Gg~~a~~~a~---~~~~~v~~~v~~~~~~~~~~~~~~~~--~~~~~~ 172 (273)
.....++|+.+.++.+ . .++++|+|+|+||.+|+.++. ..+.++++++++.+............ ......
T Consensus 73 ~~p~~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 152 (274)
T 2qru_A 73 KIDHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQAISA 152 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSCCCS
T ss_pred CCcHHHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhccccccH
Confidence 3344455555554444 3 689999999999999999987 35677999998877554111000000 000000
Q ss_pred hhhhhc-----cCCC-ChHHHH-----HHhh-h-hhccC--C-----CCChhhHHhhhhccEEEEecCCCCCCChHHHHH
Q 024042 173 ERIDHL-----MLPE-SASQLR-----TLTG-L-AVSKN--L-----DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATE 232 (273)
Q Consensus 173 ~~~~~~-----~~~~-~~~~~~-----~~~~-~-~~~~~--~-----~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~ 232 (273)
...... .... ...... .... . .+... . .......+..+ .|+++++|+.|..++.+.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~~~~ 231 (274)
T 2qru_A 153 KEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEVPFRYSKK 231 (274)
T ss_dssp GGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSSCTHHHHH
T ss_pred HHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCcCHHHHHH
Confidence 000000 0000 000000 0000 0 00000 0 00111223444 699999999999999999999
Q ss_pred HHHHhcCCcEEEEeCCCCCCcCcCChh----hHHHHHHHHhccc
Q 024042 233 LKELLGKKARLEIIENTSHVPQIENPG----LFNSIVKNFLRGS 272 (273)
Q Consensus 233 ~~~~~~~~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~~ 272 (273)
+.+.+ ++++++++++++|.++.+.+. ++.+.+.+||+++
T Consensus 232 l~~~~-~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 274 (274)
T 2qru_A 232 IGRTI-PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKER 274 (274)
T ss_dssp HHHHS-TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred HHHhC-CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhhC
Confidence 99988 889999999999987665443 5577888998764
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=181.49 Aligned_cols=231 Identities=13% Similarity=0.126 Sum_probs=151.0
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchh--HhHH-HHHHhh--cCCCeEEeecCCCCCCCCCCCc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI--WQWR-KQVQFF--APHFNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~--~~~~-~~~~~l--~~~~~v~~~d~~g~g~s~~~~~ 100 (273)
+..+++..+ .+++++.+.|+.....++.|+||++||++++.. ..|. .+...+ ..+|.|+++|+||+|.+.....
T Consensus 469 ~~~~~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~ 547 (719)
T 1z68_A 469 EIKKLEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLL 547 (719)
T ss_dssp EEEEEEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHH
T ss_pred EEEEEecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhH
Confidence 445556645 889888876543223456789999999887641 1232 233334 3459999999999998763211
Q ss_pred cc----cHHHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhh
Q 024042 101 QR----TELFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA 170 (273)
Q Consensus 101 ~~----~~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~ 170 (273)
.. ......+|+.+.++.+ +.++++++|||+||.+|+.++.++|++++++|+++|......... ....
T Consensus 548 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-~~~~-- 624 (719)
T 1z68_A 548 YAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYAS-VYTE-- 624 (719)
T ss_dssp GGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBH-HHHH--
T ss_pred HHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhcc-ccch--
Confidence 10 0012234444444333 236899999999999999999999999999999998776543211 1100
Q ss_pred hhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhc-cEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEe
Q 024042 171 NLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVH-DVLIVWGDQDQIFPLKMATELKELL---GKKARLEII 246 (273)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~ 246 (273)
.... .+........+.. ..+.....++.. |+|+++|++|..+|.+.++.+.+.+ +.+.+++++
T Consensus 625 ---~~~g--~~~~~~~~~~~~~--------~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 691 (719)
T 1z68_A 625 ---RFMG--LPTKDDNLEHYKN--------STVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWY 691 (719)
T ss_dssp ---HHHC--CSSTTTTHHHHHH--------TCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ---hhcC--Ccccccchhhhhh--------CCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEE
Confidence 0000 0100000011100 122233456666 8999999999999999999888877 346789999
Q ss_pred CCCCCCcCcCChhhHHHHHHHHhcccC
Q 024042 247 ENTSHVPQIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 247 ~~~gH~~~~~~~~~~~~~i~~fl~~~l 273 (273)
+++||.+..++++++.+.+.+||+++|
T Consensus 692 ~~~gH~~~~~~~~~~~~~i~~fl~~~l 718 (719)
T 1z68_A 692 SDQNHGLSGLSTNHLYTHMTHFLKQCF 718 (719)
T ss_dssp TTCCTTCCTHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCcccHHHHHHHHHHHHHHhh
Confidence 999999866678899999999998753
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.92 E-value=7.9e-26 Score=173.01 Aligned_cols=222 Identities=14% Similarity=0.153 Sum_probs=142.3
Q ss_pred ceeEEecC-CcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc
Q 024042 26 SSQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 26 ~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~ 100 (273)
....+... ++..+.++... ...++.|+||++||.+ ++. ..|..+...|.+. |.|+++|+||+|.+..+..
T Consensus 57 ~~~~i~y~~~~~~~~~~~p~----~~~~~~p~vv~~HGgg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~r~~~~~~~~~~ 131 (303)
T 4e15_A 57 TVDHLRYGEGRQLVDVFYSE----KTTNQAPLFVFVHGGYWQEMDM-SMSCSIVGPLVRRGYRVAVMDYNLCPQVTLEQL 131 (303)
T ss_dssp EEEEEECSSTTCEEEEEECT----TCCTTCCEEEEECCSTTTSCCG-GGSCTTHHHHHHTTCEEEEECCCCTTTSCHHHH
T ss_pred ceeeeccCCCCcEEEEEecC----CCCCCCCEEEEECCCcCcCCCh-hHHHHHHHHHHhCCCEEEEecCCCCCCCChhHH
Confidence 44555554 23345554432 2245789999999943 444 6677777777665 9999999999987643222
Q ss_pred cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCC-------cccceEEEecCCCCCCCcchHHHhhhhhhh
Q 024042 101 QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWP-------ERVEKVVIASSGVNMKRGDNEALVKRANLE 173 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-------~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
..+.....+.+.+..+.++.++++++|||+||.+|+.++.+.+ ++++++|++++..+... ..... ..
T Consensus 132 ~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~-----~~~~~-~~ 205 (303)
T 4e15_A 132 MTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRE-----LSNLE-SV 205 (303)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHH-----HHTCT-TT
T ss_pred HHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHh-----hhccc-cc
Confidence 2233333444444445667789999999999999999998653 37999999998766421 11100 00
Q ss_pred hhhhccCCCChHHHHHHhhhhhccCCCCChh-hHHh----hhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEE
Q 024042 174 RIDHLMLPESASQLRTLTGLAVSKNLDIVPD-FFFN----DFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEI 245 (273)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~ 245 (273)
.....+ ....... ....+. .... ....|+|+++|++|..++.+.++.+.+.+ +.++++++
T Consensus 206 ~~~~~~-~~~~~~~-----------~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~ 273 (303)
T 4e15_A 206 NPKNIL-GLNERNI-----------ESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTL 273 (303)
T ss_dssp SGGGTT-CCCTTTT-----------TTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred chhhhh-cCCHHHH-----------HHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEE
Confidence 000000 0000000 000111 1112 23569999999999999999999988887 34789999
Q ss_pred eCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 246 IENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 246 ~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
+++++|+.+.+........+.+||.
T Consensus 274 ~~g~~H~~~~~~~~~~~~~l~~~l~ 298 (303)
T 4e15_A 274 FKGYDHFDIIEETAIDDSDVSRFLR 298 (303)
T ss_dssp EEEEETTHHHHGGGSTTSHHHHHHH
T ss_pred eCCCCchHHHHHHhCCCcHHHHHHH
Confidence 9999999888877776667776664
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-23 Score=157.89 Aligned_cols=216 Identities=14% Similarity=0.082 Sum_probs=137.1
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH---HHHhhcC-CCeEEeecCCCCCCCCCCC----------
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK---QVQFFAP-HFNVYVPDLIFFGHSTTRS---------- 99 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~---~~~~l~~-~~~v~~~d~~g~g~s~~~~---------- 99 (273)
.|..+.++.+.|+... .++.|+||++||++++. ..|.. +...+.+ ++.|+++|+||+|.|....
T Consensus 25 ~g~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~-~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~ 102 (278)
T 3e4d_A 25 LKSEMTFAVYVPPKAI-HEPCPVVWYLSGLTCTH-ANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGA 102 (278)
T ss_dssp TTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCS-HHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBTTB
T ss_pred cCCcceEEEEcCCCCC-CCCCCEEEEEcCCCCCc-cchhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccCCc
Confidence 6777877776543211 45678999999999888 77766 3444444 4999999999999875432
Q ss_pred ------------cccc-HHHHHHHHHHHHHHh-CC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch
Q 024042 100 ------------IQRT-ELFQAASLGKLLEKI-GV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN 163 (273)
Q Consensus 100 ------------~~~~-~~~~~~~~~~~~~~~-~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~ 163 (273)
.... .+..++++..+++.. +. ++++++|||+||.+|+.++.++|++++++++++|.........
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~ 182 (278)
T 3e4d_A 103 GFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSSADW 182 (278)
T ss_dssp CTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCGGGCTT
T ss_pred cccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccccCCcc
Confidence 0011 334455677777665 55 7899999999999999999999999999999998766432211
Q ss_pred HHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhh--ccEEEEecCCCCCCChHH-HHHHHHHh---
Q 024042 164 EALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV--HDVLIVWGDQDQIFPLKM-ATELKELL--- 237 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~l~i~g~~D~~~~~~~-~~~~~~~~--- 237 (273)
... .+...+... ... + ....+.....++. .|+++++|++|.+++.+. .+.+.+.+
T Consensus 183 ~~~-------~~~~~~~~~-~~~--------~---~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~ 243 (278)
T 3e4d_A 183 SEP-------ALEKYLGAD-RAA--------W---RRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGT 243 (278)
T ss_dssp THH-------HHHHHHCSC-GGG--------G---GGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTS
T ss_pred chh-------hHHHhcCCc-HHH--------H---HhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHHHHHHc
Confidence 000 000000000 000 0 0112222222222 399999999999988532 45666655
Q ss_pred cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 238 GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 238 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+.+++++++++++|.... -+...+.+.+|+.+.
T Consensus 244 g~~~~~~~~~g~~H~~~~--~~~~~~~~l~~~~~~ 276 (278)
T 3e4d_A 244 DIGLTLRMHDRYDHSYYF--ISTFMDDHLKWHAER 276 (278)
T ss_dssp SCEEEEEEETTCCSSHHH--HHHHHHHHHHHHHHH
T ss_pred CCCceEEEeCCCCcCHHH--HHHHHHHHHHHHHHh
Confidence 345789999999997532 223444555666543
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=158.50 Aligned_cols=217 Identities=16% Similarity=0.107 Sum_probs=136.8
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH---HHHhhcC-CCeEEeecCCCCCCCCCCCcc--------
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK---QVQFFAP-HFNVYVPDLIFFGHSTTRSIQ-------- 101 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~---~~~~l~~-~~~v~~~d~~g~g~s~~~~~~-------- 101 (273)
+|.++.++.+.|+.....++.|+||++||++++. ..|.. +...+.+ ++.|+++|.+++|.+......
T Consensus 27 ~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~-~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~g~~ 105 (280)
T 3i6y_A 27 LNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSD-ENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQGAG 105 (280)
T ss_dssp TTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCS-SHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSSTTCC
T ss_pred cCCeeEEEEEeCCCCCCCCCccEEEEecCCCCCh-hHHhhcccHHHHHhhCCeEEEEeCCcccccccCcccccccccCcc
Confidence 6777887777644322356678999999999887 66655 3344444 499999999877764322110
Q ss_pred --------------ccHHHHHHHHHHHHHH-hCC-ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHH
Q 024042 102 --------------RTELFQAASLGKLLEK-IGV-ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA 165 (273)
Q Consensus 102 --------------~~~~~~~~~~~~~~~~-~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~ 165 (273)
.......+++..+++. +.. ++++++|||+||.+|+.++.++|++++++++++|...........
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~~~~ 185 (280)
T 3i6y_A 106 FYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPVNCPWGQ 185 (280)
T ss_dssp TTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCGGGSHHHH
T ss_pred ccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccccccCchHH
Confidence 1133345667777754 344 789999999999999999999999999999999977643221100
Q ss_pred HhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhh--ccEEEEecCCCCCCChHH-HHHHHHHh---cC
Q 024042 166 LVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV--HDVLIVWGDQDQIFPLKM-ATELKELL---GK 239 (273)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~l~i~g~~D~~~~~~~-~~~~~~~~---~~ 239 (273)
. .+...+.. ... ......+.....++. .|+++++|++|.+++.+. .+.+.+.+ +.
T Consensus 186 ~-------~~~~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~ 246 (280)
T 3i6y_A 186 K-------AFTAYLGK-DTD-----------TWREYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNNY 246 (280)
T ss_dssp H-------HHHHHHCS-CGG-----------GTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTC
T ss_pred H-------HHHHhcCC-chH-----------HHHhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHHHHcCC
Confidence 0 00000000 000 000112333334443 599999999999998643 45555544 46
Q ss_pred CcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 240 KARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 240 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+++++++|+++|.... .....+...+|+.+.
T Consensus 247 ~~~~~~~~g~~H~~~~--~~~~~~~~l~~~~~~ 277 (280)
T 3i6y_A 247 PLELRSHEGYDHSYYF--IASFIEDHLRFHSNY 277 (280)
T ss_dssp CEEEEEETTCCSSHHH--HHHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCccHHH--HHHhHHHHHHHHHhh
Confidence 7899999999997532 223444555665543
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.9e-24 Score=163.86 Aligned_cols=231 Identities=13% Similarity=0.074 Sum_probs=142.1
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~ 100 (273)
+..++...+|..+.++.+.+ ..++.|+||++||.| ++. ..|..+...|.. ++.|+++|+|+.++...+..
T Consensus 61 ~~~~i~~~~G~~i~~~~~~P----~~~~~p~vv~~HGgG~~~g~~-~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~p~~ 135 (317)
T 3qh4_A 61 ADDVVTGEAGRPVPVRIYRA----APTPAPVVVYCHAGGFALGNL-DTDHRQCLELARRARCAVVSVDYRLAPEHPYPAA 135 (317)
T ss_dssp EEEEEECTTSCEEEEEEEEC----SCSSEEEEEEECCSTTTSCCT-TTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHH
T ss_pred EEEEecCCCCCeEEEEEEec----CCCCCcEEEEECCCcCccCCh-HHHHHHHHHHHHHcCCEEEEecCCCCCCCCCchH
Confidence 44455556787777777652 235678999999876 455 667777877763 49999999998776543322
Q ss_pred cccHHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCc----ccceEEEecCCCCCCCcchHHHhhhhhhhh
Q 024042 101 QRTELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPE----RVEKVVIASSGVNMKRGDNEALVKRANLER 174 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (273)
..+.....+++.+..+.++. ++++|+|||+||.+|+.++...++ .++++++++|..... ... .......
T Consensus 136 ~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~-~~~-~~~~~~~--- 210 (317)
T 3qh4_A 136 LHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR-PTA-SRSEFRA--- 210 (317)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS-CCH-HHHHTTT---
T ss_pred HHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC-CCc-CHHHhcC---
Confidence 22333333333333334554 589999999999999999987655 499999999988765 211 1111000
Q ss_pred hhhccCCCChHHHHHHhhhhhccC---CCCChhhHHhhhh--ccEEEEecCCCCCCC--hHHHHHHHHHhcCCcEEEEeC
Q 024042 175 IDHLMLPESASQLRTLTGLAVSKN---LDIVPDFFFNDFV--HDVLIVWGDQDQIFP--LKMATELKELLGKKARLEIIE 247 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~p~l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~ 247 (273)
.................... ....+. ...++. .|+++++|+.|.+++ ....+.+.+. +.++++++++
T Consensus 211 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~l~~lpP~li~~G~~D~~~~~~~~~a~~l~~~-g~~~~l~~~~ 284 (317)
T 3qh4_A 211 ----TPAFDGEAASLMWRHYLAGQTPSPESVPG-RRGQLAGLPATLITCGEIDPFRDEVLDYAQRLLGA-GVSTELHIFP 284 (317)
T ss_dssp ----CSSSCHHHHHHHHHHHHTTCCCCTTTCGG-GCSCCTTCCCEEEEEEEESTTHHHHHHHHHHHHHT-TCCEEEEEEE
T ss_pred ----CCCcCHHHHHHHHHHhcCCCCCCcccCCC-cccccCCCCceeEEecCcCCCchhHHHHHHHHHHc-CCCEEEEEeC
Confidence 00011111111111111110 000110 011111 299999999999876 3344444443 3789999999
Q ss_pred CCCCCcC-----cCChhhHHHHHHHHhccc
Q 024042 248 NTSHVPQ-----IENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 248 ~~gH~~~-----~~~~~~~~~~i~~fl~~~ 272 (273)
+++|.+. .+.++++.+.+.+||+++
T Consensus 285 g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~ 314 (317)
T 3qh4_A 285 RACHGFDSLLPEWTTSQRLFAMQGHALADA 314 (317)
T ss_dssp EEETTHHHHCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCccchhhhcCCchHHHHHHHHHHHHHHHH
Confidence 9999743 355678889999999875
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=179.50 Aligned_cols=229 Identities=15% Similarity=0.111 Sum_probs=150.1
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHhHH-HHHHhhc--CCCeEEeecCCCCCCCCCCCc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQWR-KQVQFFA--PHFNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~~~-~~~~~l~--~~~~v~~~d~~g~g~s~~~~~ 100 (273)
+...+ ..+|.+++++.+.|+.....++.|+||++||++++. ...|. .....+. ++|.|+++|+||+|.+.....
T Consensus 475 ~~~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~ 553 (740)
T 4a5s_A 475 KLDFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIM 553 (740)
T ss_dssp EEEEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHH
T ss_pred EEEEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHH
Confidence 33445 448999999888755433355678999999987662 01221 1223333 459999999999997643211
Q ss_pred --------cccHHHHHHHHHHHHHHhC---CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhh
Q 024042 101 --------QRTELFQAASLGKLLEKIG---VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169 (273)
Q Consensus 101 --------~~~~~~~~~~~~~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~ 169 (273)
....++..+.+..+. ..+ .++++|+|||+||.+|+.++.++|++++++|+++|.......... ...
T Consensus 554 ~~~~~~~~~~~~~D~~~~i~~l~-~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~-~~~- 630 (740)
T 4a5s_A 554 HAINRRLGTFEVEDQIEAARQFS-KMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSV-YTE- 630 (740)
T ss_dssp GGGTTCTTSHHHHHHHHHHHHHH-TSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHH-HHH-
T ss_pred HHHHhhhCcccHHHHHHHHHHHH-hcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhhhH-HHH-
Confidence 112333333333333 222 378999999999999999999999999999999988764422110 000
Q ss_pred hhhhhhhhc-cCCCChHHHHHHhhhhhccCCCCChhhHHhhhhc-cEEEEecCCCCCCChHHHHHHHHHh---cCCcEEE
Q 024042 170 ANLERIDHL-MLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVH-DVLIVWGDQDQIFPLKMATELKELL---GKKARLE 244 (273)
Q Consensus 170 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~ 244 (273)
.+... .......... ...+.....++.. |+|+++|+.|..+|.+.++.+.+.+ +.+.+++
T Consensus 631 ----~~~~~p~~~~~~~~~~-----------~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~ 695 (740)
T 4a5s_A 631 ----RYMGLPTPEDNLDHYR-----------NSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAM 695 (740)
T ss_dssp ----HHHCCSSTTTTHHHHH-----------HSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEE
T ss_pred ----HHcCCCCccccHHHHH-----------hCCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEE
Confidence 00000 0011111111 0122334556665 9999999999999999998888877 3567999
Q ss_pred EeCCCCCCc-CcCChhhHHHHHHHHhcccC
Q 024042 245 IIENTSHVP-QIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 245 ~~~~~gH~~-~~~~~~~~~~~i~~fl~~~l 273 (273)
++|+++|.+ ..+.++.+.+.+.+||++++
T Consensus 696 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 725 (740)
T 4a5s_A 696 WYTDEDHGIASSTAHQHIYTHMSHFIKQCF 725 (740)
T ss_dssp EETTCCTTCCSHHHHHHHHHHHHHHHHHHT
T ss_pred EECCCCCcCCCCccHHHHHHHHHHHHHHHc
Confidence 999999997 55678889999999998754
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.1e-23 Score=174.28 Aligned_cols=236 Identities=17% Similarity=0.080 Sum_probs=149.3
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHHHhh-cCCCeEEeecCCCCCCCCCC---Cc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQFF-APHFNVYVPDLIFFGHSTTR---SI 100 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~~~l-~~~~~v~~~d~~g~g~s~~~---~~ 100 (273)
+...++..||.++.++.+.|+....+++.|+||++||..+.. ...|......| .++|.|+++|+||+|.+... ..
T Consensus 418 ~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~ 497 (695)
T 2bkl_A 418 EQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAG 497 (695)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTT
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhh
Confidence 344556668999998887654323345789999999965444 12344444434 44599999999998876421 00
Q ss_pred -cccHHHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhh
Q 024042 101 -QRTELFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE 173 (273)
Q Consensus 101 -~~~~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
........+|+.+.++.+ +.++++++|||+||.+++.++.++|++++++|+.+|..+......... ...
T Consensus 498 ~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~----~~~ 573 (695)
T 2bkl_A 498 RLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGS----GRT 573 (695)
T ss_dssp SGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTT----GGG
T ss_pred HhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCC----Ccc
Confidence 111222334444444444 347899999999999999999999999999999998876543211000 000
Q ss_pred hhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhh--ccEEEEecCCCCCCChHHHHHHHHHhc------CCcEEEE
Q 024042 174 RIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV--HDVLIVWGDQDQIFPLKMATELKELLG------KKARLEI 245 (273)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~l~i~g~~D~~~~~~~~~~~~~~~~------~~~~~~~ 245 (273)
.......+........+... .+......+. .|+|+++|++|..+++..++++++.+. ..+++++
T Consensus 574 ~~~~~g~~~~~~~~~~~~~~--------sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 645 (695)
T 2bkl_A 574 WIPEYGTAEKPEDFKTLHAY--------SPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRI 645 (695)
T ss_dssp GHHHHCCTTSHHHHHHHHHH--------CGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEE
T ss_pred hHHHhCCCCCHHHHHHHHhc--------ChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEE
Confidence 01111112222222211111 1111122222 399999999999999999999988872 2478999
Q ss_pred eCCCCCCcC--cCChhhHHHHHHHHhcccC
Q 024042 246 IENTSHVPQ--IENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 246 ~~~~gH~~~--~~~~~~~~~~i~~fl~~~l 273 (273)
++++||... .+++.+....+.+||.+++
T Consensus 646 ~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 675 (695)
T 2bkl_A 646 EANAGHGGADQVAKAIESSVDLYSFLFQVL 675 (695)
T ss_dssp ETTCBTTBCSCHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCcCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 999999873 2445667778889987654
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.3e-23 Score=150.73 Aligned_cols=189 Identities=15% Similarity=0.201 Sum_probs=136.2
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCC----CeEEeecCCCCCCCC----------CCC---------ccc-cHHHHH
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH----FNVYVPDLIFFGHST----------TRS---------IQR-TELFQA 108 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~----~~v~~~d~~g~g~s~----------~~~---------~~~-~~~~~~ 108 (273)
..++|||+||++++. ..|..+++.|.+. ++|+.+|.+++|.+. .+. ..+ +++..+
T Consensus 3 ~~~pvv~iHG~~~~~-~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a 81 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQ-NRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQA 81 (250)
T ss_dssp SCCCEEEECCCGGGH-HHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHH
T ss_pred CCCCEEEECCCCCCH-HHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHH
Confidence 456899999999999 9999999999764 679988888777521 110 111 567788
Q ss_pred HHHHHHHHHh----CCccEEEEEeccchHHHHHHHHhC-----CcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc
Q 024042 109 ASLGKLLEKI----GVERFSVVGTSYGGFVAYHMARMW-----PERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM 179 (273)
Q Consensus 109 ~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~-----~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (273)
+++..+++.+ +.++++++||||||.++..++.++ +++|+++|+++++........
T Consensus 82 ~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~---------------- 145 (250)
T 3lp5_A 82 VWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTST---------------- 145 (250)
T ss_dssp HHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCS----------------
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccccc----------------
Confidence 8888888887 778999999999999999999877 568999999998776543210
Q ss_pred CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecC----CCCCCChHHHHHHHHHhcCC-cE--EEEe--CCCC
Q 024042 180 LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGD----QDQIFPLKMATELKELLGKK-AR--LEII--ENTS 250 (273)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~----~D~~~~~~~~~~~~~~~~~~-~~--~~~~--~~~g 250 (273)
......++.+.... ...+. ..|+++|+|+ .|.++|.+.++.+...+.+. .. .+.+ ++++
T Consensus 146 -~~~~~~~~~l~~~~-----~~lp~------~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~ 213 (250)
T 3lp5_A 146 -TAKTSMFKELYRYR-----TGLPE------SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTA 213 (250)
T ss_dssp -SCCCHHHHHHHHTG-----GGSCT------TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBS
T ss_pred -cccCHHHHHHHhcc-----ccCCC------CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCc
Confidence 01111222222110 00111 2399999999 89999999998888777322 22 3334 3577
Q ss_pred CCcCcCChhhHHHHHHHHhcc
Q 024042 251 HVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 251 H~~~~~~~~~~~~~i~~fl~~ 271 (273)
|..+.++| ++.+.|.+||.+
T Consensus 214 H~~l~e~~-~v~~~I~~FL~~ 233 (250)
T 3lp5_A 214 HSDLPQNK-QIVSLIRQYLLA 233 (250)
T ss_dssp SCCHHHHH-HHHHHHHHHTSC
T ss_pred hhcchhCH-HHHHHHHHHHhc
Confidence 99999988 899999999975
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.1e-23 Score=152.31 Aligned_cols=200 Identities=20% Similarity=0.157 Sum_probs=132.2
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCCCeE--------------EeecCCCCCCCCCC-------CccccHHHHHHHH
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNV--------------YVPDLIFFGHSTTR-------SIQRTELFQAASL 111 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v--------------~~~d~~g~g~s~~~-------~~~~~~~~~~~~~ 111 (273)
.+++|||+||++++. ..|..+++.|.+.+.+ +.+|-++.+.+..+ ....+...+++++
T Consensus 2 ~~~pvvllHG~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l 80 (254)
T 3ds8_A 2 DQIPIILIHGSGGNA-SSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWL 80 (254)
T ss_dssp CCCCEEEECCTTCCT-TTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHH
T ss_pred CCCCEEEECCCCCCc-chHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHH
Confidence 357899999999999 8999999999877544 44442211112222 2234777778887
Q ss_pred ----HHHHHHhCCccEEEEEeccchHHHHHHHHhCCc-----ccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCC
Q 024042 112 ----GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE-----RVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPE 182 (273)
Q Consensus 112 ----~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~-----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (273)
..+.+.++.++++++||||||.+++.++.++|+ +++++|+++++........ .. ........+.
T Consensus 81 ~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~--~~-----~~~~~~~~p~ 153 (254)
T 3ds8_A 81 KIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPND--NG-----MDLSFKKLPN 153 (254)
T ss_dssp HHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHH--HC-----SCTTCSSCSS
T ss_pred HHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccc--cc-----cccccccCCc
Confidence 445556677899999999999999999999988 8999999998776543210 00 0000001111
Q ss_pred ChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecC------CCCCCChHHHHHHHHHhcCC---cEEEEeCC--CCC
Q 024042 183 SASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGD------QDQIFPLKMATELKELLGKK---ARLEIIEN--TSH 251 (273)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~------~D~~~~~~~~~~~~~~~~~~---~~~~~~~~--~gH 251 (273)
....+..+..... ..+. ..|++.|+|+ .|.+||.+.++.+...++.+ .+...+.+ ++|
T Consensus 154 ~~~~~~~~~~~~~-----~~~~------~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~H 222 (254)
T 3ds8_A 154 STPQMDYFIKNQT-----EVSP------DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVH 222 (254)
T ss_dssp CCHHHHHHHHTGG-----GSCT------TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCG
T ss_pred chHHHHHHHHHHh-----hCCC------CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCch
Confidence 1122222111100 0111 2389999999 99999999999888777322 33445554 779
Q ss_pred CcCcCChhhHHHHHHHHhccc
Q 024042 252 VPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 252 ~~~~~~~~~~~~~i~~fl~~~ 272 (273)
..+.++|+ +.+.+..||++.
T Consensus 223 s~l~~~~~-v~~~i~~fL~~~ 242 (254)
T 3ds8_A 223 QTLHETPK-SIEKTYWFLEKF 242 (254)
T ss_dssp GGGGGSHH-HHHHHHHHHHTC
T ss_pred hcccCCHH-HHHHHHHHHHHh
Confidence 99888885 889999999763
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4e-23 Score=175.40 Aligned_cols=235 Identities=12% Similarity=0.020 Sum_probs=148.6
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHH-Hhhc-CCCeEEeecCCCCCCCCCCC---
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQV-QFFA-PHFNVYVPDLIFFGHSTTRS--- 99 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~-~~l~-~~~~v~~~d~~g~g~s~~~~--- 99 (273)
+...+...||.++.++.+.++....+++.|+||++||+++.. ...|.... ..+. ++|.|+++|+||+|.+....
T Consensus 438 ~~~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~ 517 (710)
T 2xdw_A 438 VQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKG 517 (710)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHT
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHh
Confidence 344555668999998887654433345789999999976554 12233333 3445 56999999999998763210
Q ss_pred -----ccccHHHHHHHHHHHHHH--hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh
Q 024042 100 -----IQRTELFQAASLGKLLEK--IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL 172 (273)
Q Consensus 100 -----~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (273)
.....++..+.+..+++. .+.++++++|||+||.+++.++.++|++++++|+.+|..+......... ..
T Consensus 518 ~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~----~~ 593 (710)
T 2xdw_A 518 GILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTI----GH 593 (710)
T ss_dssp TSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTT----GG
T ss_pred hhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCC----Ch
Confidence 111233334444444333 1447899999999999999999999999999999998776543211000 00
Q ss_pred hhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHh-----hhhc-cEEEEecCCCCCCChHHHHHHHHHh---------
Q 024042 173 ERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFN-----DFVH-DVLIVWGDQDQIFPLKMATELKELL--------- 237 (273)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-p~l~i~g~~D~~~~~~~~~~~~~~~--------- 237 (273)
........+........+... .+..... .+.. |+|+++|++|..+++..+.++.+.+
T Consensus 594 ~~~~~~g~~~~~~~~~~~~~~--------sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 665 (710)
T 2xdw_A 594 AWTTDYGCSDSKQHFEWLIKY--------SPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRK 665 (710)
T ss_dssp GGHHHHCCTTSHHHHHHHHHH--------CGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTT
T ss_pred hHHHhCCCCCCHHHHHHHHHh--------CcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccC
Confidence 000111112222222211111 1112222 3454 9999999999999999888887776
Q ss_pred -cCCcEEEEeCCCCCCcCcC--ChhhHHHHHHHHhccc
Q 024042 238 -GKKARLEIIENTSHVPQIE--NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 238 -~~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~ 272 (273)
+..+++++++++||..... ++.+..+.+.+||.++
T Consensus 666 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 703 (710)
T 2xdw_A 666 QNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARC 703 (710)
T ss_dssp CCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2345899999999987653 3457778888998764
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-21 Score=146.87 Aligned_cols=220 Identities=15% Similarity=0.077 Sum_probs=139.9
Q ss_pred CcceEEeecCCccCC----CCCCCCCeEEEEcCCCCchhHhHHH--HHHhhcC-C-CeEEeecCCCCCCCCCCCccccHH
Q 024042 34 DETTLHFWGPKLEDD----HKTLKKPSLVLIHGFGPEAIWQWRK--QVQFFAP-H-FNVYVPDLIFFGHSTTRSIQRTEL 105 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~----~~~~~~~~vi~~hG~~~~~~~~~~~--~~~~l~~-~-~~v~~~d~~g~g~s~~~~~~~~~~ 105 (273)
.|.++.++.+.|+.. .+.++.|+||++||++++. ..|.. ....+.+ . +.|+.+|+++.+.+..+......+
T Consensus 17 ~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 95 (263)
T 2uz0_A 17 LDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNH-NSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQYGFDYYT 95 (263)
T ss_dssp TTEEEEEEEEECC---------CCBCEEEEECCTTCCT-THHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCTTSCBHHH
T ss_pred hCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCH-HHHHhccCHHHHHhcCCeEEEEECCCCCccccCCCcccHHH
Confidence 566777776654332 1245679999999999888 77777 4555544 3 888899998887766443333456
Q ss_pred HHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc
Q 024042 106 FQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM 179 (273)
Q Consensus 106 ~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (273)
..++++..+++.. +.++++++|||+||.+|+.++. +|+++++++++++.......... ..
T Consensus 96 ~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~~~-~~------------ 161 (263)
T 2uz0_A 96 ALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFSPE-SQ------------ 161 (263)
T ss_dssp HHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCCGG-GT------------
T ss_pred HHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhcccc-cc------------
Confidence 6677888888775 2378999999999999999999 99999999999998765432110 00
Q ss_pred CCCChHHHHHHhhhhhc-cCCCCChhhHHhhhh--ccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCc
Q 024042 180 LPESASQLRTLTGLAVS-KNLDIVPDFFFNDFV--HDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVP 253 (273)
Q Consensus 180 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~ 253 (273)
................. ......+.....++. .|+++++|++|.+++ ..+.+.+.+ +.+.+++++++ +|..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~g-~H~~ 238 (263)
T 2uz0_A 162 NLGSPAYWRGVFGEIRDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLYE--ANNLAVKNLKKLGFDVTYSHSAG-THEW 238 (263)
T ss_dssp TCSCHHHHHHHHCCCSCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTHH--HHHHHHHHHHHTTCEEEEEEESC-CSSH
T ss_pred ccccchhHHHHcCChhhhccccCCHHHHHHhccCCCeEEEEeCCCchhhH--HHHHHHHHHHHCCCCeEEEECCC-CcCH
Confidence 00000111111110000 001112223333343 599999999999874 345555554 34578999998 9975
Q ss_pred CcCChhhHHHHHHHHhcccC
Q 024042 254 QIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 254 ~~~~~~~~~~~i~~fl~~~l 273 (273)
.. .++..+.+.+||.+++
T Consensus 239 ~~--~~~~~~~~~~~l~~~l 256 (263)
T 2uz0_A 239 YY--WEKQLEVFLTTLPIDF 256 (263)
T ss_dssp HH--HHHHHHHHHHHSSSCC
T ss_pred HH--HHHHHHHHHHHHHhhc
Confidence 32 2355677888988764
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-22 Score=151.57 Aligned_cols=217 Identities=16% Similarity=0.083 Sum_probs=134.1
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH---HHHhhcC-CCeEEeecCCCCCCCCCCCc---------
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK---QVQFFAP-HFNVYVPDLIFFGHSTTRSI--------- 100 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~---~~~~l~~-~~~v~~~d~~g~g~s~~~~~--------- 100 (273)
.|.++.++.+.|+.....++.|+||++||++++. ..|.. +...+.+ ++.|+++|.+++|.+.....
T Consensus 25 ~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~-~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g~~ 103 (280)
T 3ls2_A 25 THCTMRFAVFLPPGASESNKVPVLYWLSGLTCTD-ENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQGAG 103 (280)
T ss_dssp TTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCS-HHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTTCC
T ss_pred cCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCCh-hhhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccCCc
Confidence 6778888777654332355678999999998887 66654 3344444 49999999887665422110
Q ss_pred ------------c-ccHHHHHHHHHHHHHHh-CC-ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHH
Q 024042 101 ------------Q-RTELFQAASLGKLLEKI-GV-ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA 165 (273)
Q Consensus 101 ------------~-~~~~~~~~~~~~~~~~~-~~-~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~ 165 (273)
. .......+++..+++.. .. ++++++|||+||.+|+.++.++|++++++++++|...........
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~~~~ 183 (280)
T 3ls2_A 104 FYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVNPINCPWGV 183 (280)
T ss_dssp TTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSCGGGSHHHH
T ss_pred cccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccCcccCcchh
Confidence 0 11333455666666654 22 789999999999999999999999999999999876643221100
Q ss_pred HhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhh----hccEEEEecCCCCCCChHH-HHHHHHHh---
Q 024042 166 LVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDF----VHDVLIVWGDQDQIFPLKM-ATELKELL--- 237 (273)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~p~l~i~g~~D~~~~~~~-~~~~~~~~--- 237 (273)
. .....+.. ... ......+.....++ ..|+++++|++|.+++.+. .+.+.+.+
T Consensus 184 ~-------~~~~~~g~-~~~-----------~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~ 244 (280)
T 3ls2_A 184 K-------AFTGYLGA-DKT-----------TWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQK 244 (280)
T ss_dssp H-------HHHHHHCS-CGG-----------GTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHHH
T ss_pred h-------HHHhhcCc-hHH-----------HHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHHHHHh
Confidence 0 00000000 000 00011222333333 3399999999999998632 33333332
Q ss_pred cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 238 GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 238 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+.+++++++|+++|.+.. .....+...+|+.+.
T Consensus 245 g~~~~~~~~~g~~H~~~~--~~~~~~~~~~~~~~~ 277 (280)
T 3ls2_A 245 DYPLTLEMQTGYDHSYFF--ISSFIDQHLVFHHQY 277 (280)
T ss_dssp TCCEEEEEETTCCSSHHH--HHHHHHHHHHHHHHH
T ss_pred CCCceEEEeCCCCCchhh--HHHHHHHHHHHHHHH
Confidence 478899999999997532 223344445666543
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=162.36 Aligned_cols=214 Identities=13% Similarity=0.083 Sum_probs=143.8
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh-CCccEEEEEecc
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI-GVERFSVVGTSY 130 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~ 130 (273)
+.+++|+++||++++. ..|..+++.|..++.|+.+|+||+|.+.. ...+.++.++++.+.+... ..++++|+||||
T Consensus 99 g~~~~l~~lhg~~~~~-~~~~~l~~~L~~~~~v~~~d~~g~~~~~~--~~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S~ 175 (329)
T 3tej_A 99 GNGPTLFCFHPASGFA-WQFSVLSRYLDPQWSIIGIQSPRPNGPMQ--TAANLDEVCEAHLATLLEQQPHGPYYLLGYSL 175 (329)
T ss_dssp CSSCEEEEECCTTSCC-GGGGGGGGTSCTTCEEEEECCCTTTSHHH--HCSSHHHHHHHHHHHHHHHCSSSCEEEEEETH
T ss_pred CCCCcEEEEeCCcccc-hHHHHHHHhcCCCCeEEEeeCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCEEEEEEcc
Confidence 3578999999999998 99999999998789999999999987652 2347888888887777776 457999999999
Q ss_pred chHHHHHHHHh---CCcccceEEEecCCCCCCCcch---------HHH--hhhhhhhhhhhccCCCChHHHHHHhhhhhc
Q 024042 131 GGFVAYHMARM---WPERVEKVVIASSGVNMKRGDN---------EAL--VKRANLERIDHLMLPESASQLRTLTGLAVS 196 (273)
Q Consensus 131 Gg~~a~~~a~~---~~~~v~~~v~~~~~~~~~~~~~---------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (273)
||.+|..+|.+ +++++.+++++++......... ... ..............................
T Consensus 176 Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (329)
T 3tej_A 176 GGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTTIEGNYAD 255 (329)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhccccccHHHHHHHHHHHHH
Confidence 99999999998 8999999999998654321000 000 000000000000011111111111110000
Q ss_pred cCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCCh--hhHHHHHHHHhcc
Q 024042 197 KNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP--GLFNSIVKNFLRG 271 (273)
Q Consensus 197 ~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~--~~~~~~i~~fl~~ 271 (273)
.. ..........+..|++++.|++|...+.+....|.+.. ++.+++.++ +||+.+.+.| +.+.+.|.+||.+
T Consensus 256 ~~-~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~-~~~~~~~v~-g~H~~~~~~~~~~~ia~~l~~~L~~ 329 (329)
T 3tej_A 256 AV-RLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWI-AELDIYRQD-CAHVDIISPGTFEKIGPIIRATLNR 329 (329)
T ss_dssp HH-HHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTE-EEEEEEEES-SCGGGGGSTTTHHHHHHHHHHHHCC
T ss_pred HH-HHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhc-CCcEEEEec-CChHHhCCChHHHHHHHHHHHHhcC
Confidence 00 00000001244559999999999887776666777666 788999998 8999888776 7899999999863
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=172.69 Aligned_cols=233 Identities=16% Similarity=0.031 Sum_probs=141.2
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHHHhhcC-CCeEEeecCCCCCCCCCCC----
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQFFAP-HFNVYVPDLIFFGHSTTRS---- 99 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~---- 99 (273)
+...++..||.++.++.+.++.. .++.|+||++||+++.. ...|......|.+ +|.|+++|+||+|.+....
T Consensus 462 ~~~~~~~~dg~~i~~~~~~p~~~--~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~ 539 (741)
T 1yr2_A 462 EQVFYPSKDGTKVPMFIVRRKDA--KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAG 539 (741)
T ss_dssp EEEEEECTTSCEEEEEEEEETTC--CSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTT
T ss_pred EEEEEEcCCCCEEEEEEEecCCC--CCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhh
Confidence 34455566899999888764321 45679999999976554 1234444445544 4999999999998763210
Q ss_pred -c---cccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhh
Q 024042 100 -I---QRTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE 173 (273)
Q Consensus 100 -~---~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
. ....++..+.+..+++.- +.++++++|||+||.++..++.++|++++++|+.+|..+......... ...
T Consensus 540 ~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~----~~~ 615 (741)
T 1yr2_A 540 RRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTA----GRY 615 (741)
T ss_dssp SGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTT----GGG
T ss_pred hhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCC----Cch
Confidence 0 112344444444444431 447899999999999999999999999999999998776543111000 000
Q ss_pred hhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhh-hhc-cEEEEecCCCCCCChHHHHHHHHHhc------CCcEEEE
Q 024042 174 RIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFND-FVH-DVLIVWGDQDQIFPLKMATELKELLG------KKARLEI 245 (273)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-p~l~i~g~~D~~~~~~~~~~~~~~~~------~~~~~~~ 245 (273)
.......+........+.. ..|...... +.. |+|+++|++|..+++....++.+.+. ..+++++
T Consensus 616 ~~~~~g~~~~~~~~~~~~~--------~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~ 687 (741)
T 1yr2_A 616 WVDDYGYPEKEADWRVLRR--------YSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRI 687 (741)
T ss_dssp GHHHHCCTTSHHHHHHHHT--------TCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEE
T ss_pred hHHHcCCCCCHHHHHHHHH--------cCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEE
Confidence 0011111222222221111 122222233 443 99999999999999999998888772 2378999
Q ss_pred eCCCCCCcCcC--ChhhHHHHHHHHhccc
Q 024042 246 IENTSHVPQIE--NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 246 ~~~~gH~~~~~--~~~~~~~~i~~fl~~~ 272 (273)
++++||..... +..+..+.+.+||.++
T Consensus 688 ~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 716 (741)
T 1yr2_A 688 ETRAGHGSGKPIDKQIEETADVQAFLAHF 716 (741)
T ss_dssp C---------CHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999987553 2346778888998764
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.7e-22 Score=165.27 Aligned_cols=235 Identities=14% Similarity=0.031 Sum_probs=148.0
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHH-Hhh-cCCCeEEeecCCCCCCCCCC----
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQV-QFF-APHFNVYVPDLIFFGHSTTR---- 98 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~-~~l-~~~~~v~~~d~~g~g~s~~~---- 98 (273)
+...++..||.++.++.+.|+....+++.|+||++||.++.. ...|.... +.| .++|.|+.+|+||.|.....
T Consensus 450 e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~ 529 (711)
T 4hvt_A 450 EQKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKS 529 (711)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHT
T ss_pred EEEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHh
Confidence 344566679999998887655443456789999999975433 12233222 244 44599999999998876421
Q ss_pred -C---ccccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh
Q 024042 99 -S---IQRTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL 172 (273)
Q Consensus 99 -~---~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (273)
. .....++..+.+..+++.- +.++++++|+|+||.+++.++.++|++++++|..+|..+........ ...
T Consensus 530 ~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~----~~~ 605 (711)
T 4hvt_A 530 AQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFG----AGH 605 (711)
T ss_dssp TSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST----TGG
T ss_pred hhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccc----cch
Confidence 0 1112333333333333321 33789999999999999999999999999999999887754321100 000
Q ss_pred hhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhc--cEEEEecCCCCCCChHHHHHHHHHh----cCCcEEEEe
Q 024042 173 ERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVH--DVLIVWGDQDQIFPLKMATELKELL----GKKARLEII 246 (273)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~ 246 (273)
........+..+.....+... .|.....++.. |+|+++|++|..||+..+.++++.+ +..++++++
T Consensus 606 ~~~~~~G~p~~~~~~~~l~~~--------SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~ 677 (711)
T 4hvt_A 606 SWVTEYGDPEIPNDLLHIKKY--------APLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLES 677 (711)
T ss_dssp GGHHHHCCTTSHHHHHHHHHH--------CGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEE
T ss_pred HHHHHhCCCcCHHHHHHHHHc--------CHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEE
Confidence 000111112222222111111 22223334444 9999999999999999999888887 456899999
Q ss_pred CCCCCCcCcC--ChhhHHHHHHHHhccc
Q 024042 247 ENTSHVPQIE--NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 247 ~~~gH~~~~~--~~~~~~~~i~~fl~~~ 272 (273)
+++||.+... +.......+.+||.++
T Consensus 678 p~~gHg~~~~~~~~~~~~~~i~~FL~~~ 705 (711)
T 4hvt_A 678 KDSGHGSGSDLKESANYFINLYTFFANA 705 (711)
T ss_dssp SSCCSSSCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCcCCcchHHHHHHHHHHHHHHH
Confidence 9999986442 2334455677888764
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=171.64 Aligned_cols=236 Identities=13% Similarity=0.010 Sum_probs=144.0
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHHHhh-cCCCeEEeecCCCCCCCCCCC----
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQFF-APHFNVYVPDLIFFGHSTTRS---- 99 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~~~l-~~~~~v~~~d~~g~g~s~~~~---- 99 (273)
+...++..||.++.++.+.|+....+++.|+||++||..+.. ...|......| .++|.|+++|+||.|......
T Consensus 426 ~~~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~ 505 (693)
T 3iuj_A 426 EQRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAG 505 (693)
T ss_dssp EEEEEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTT
T ss_pred EEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhh
Confidence 344556668999998887654433356789999999965433 13344444444 445999999999988653211
Q ss_pred ----ccccHHHHHHHHHHHHHH--hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhh
Q 024042 100 ----IQRTELFQAASLGKLLEK--IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE 173 (273)
Q Consensus 100 ----~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
.....++..+.+..+++. .+.++++++|||+||.++..++.++|++++++|+..|..+........ ....
T Consensus 506 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~----~~~~ 581 (693)
T 3iuj_A 506 TQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFT----AGTG 581 (693)
T ss_dssp SGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSG----GGGG
T ss_pred hhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccCC----Cchh
Confidence 011233444444444433 133799999999999999999999999999999999887654321100 0000
Q ss_pred hhhhccCCCChHH-HHHHhhhhhccCCCCChhhHHhh-hhcc-EEEEecCCCCCCChHHHHHHHHHhc------CCcEEE
Q 024042 174 RIDHLMLPESASQ-LRTLTGLAVSKNLDIVPDFFFND-FVHD-VLIVWGDQDQIFPLKMATELKELLG------KKARLE 244 (273)
Q Consensus 174 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~p-~l~i~g~~D~~~~~~~~~~~~~~~~------~~~~~~ 244 (273)
.....-.+..... ...+.. ..|...... +..| +|+++|++|..+|+..+.++++.+. ..++++
T Consensus 582 ~~~~~g~p~~~~~~~~~~~~--------~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 653 (693)
T 3iuj_A 582 WAYDYGTSADSEAMFDYLKG--------YSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIR 653 (693)
T ss_dssp CHHHHCCTTSCHHHHHHHHH--------HCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEE
T ss_pred HHHHcCCccCHHHHHHHHHh--------cCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEE
Confidence 0011111222222 111111 122333333 4556 9999999999999999988888771 356899
Q ss_pred EeCCCCCCcCc--CChhhHHHHHHHHhcccC
Q 024042 245 IIENTSHVPQI--ENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 245 ~~~~~gH~~~~--~~~~~~~~~i~~fl~~~l 273 (273)
+++++||.+.. ++..+....+.+||.+++
T Consensus 654 ~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 684 (693)
T 3iuj_A 654 IETNAGHGAGTPVAKLIEQSADIYAFTLYEM 684 (693)
T ss_dssp EEC-------CHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCCCCcccHHHHHHHHHHHHHHHHHHc
Confidence 99999998754 345567778889987654
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-21 Score=154.21 Aligned_cols=198 Identities=17% Similarity=0.198 Sum_probs=135.9
Q ss_pred CceeEEecC-CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH-HHH--------H--Hhh-cCCCeEEeecCCC
Q 024042 25 LSSQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW-RKQ--------V--QFF-APHFNVYVPDLIF 91 (273)
Q Consensus 25 ~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-~~~--------~--~~l-~~~~~v~~~d~~g 91 (273)
++...+... +|.++.++.+.|+.....++.|+||++||++++....+ ..+ . ... ...+.|+++|.+|
T Consensus 144 ~~~~~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g 223 (380)
T 3doh_A 144 FLAFTFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPP 223 (380)
T ss_dssp EEEEEEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCT
T ss_pred ccceeeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCC
Confidence 345566666 88999998887544223455689999999875531111 111 0 111 2237899999997
Q ss_pred CCCCCCCC--------ccccHHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc
Q 024042 92 FGHSTTRS--------IQRTELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG 161 (273)
Q Consensus 92 ~g~s~~~~--------~~~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~ 161 (273)
.+...... ......+..+.+..+++..+. ++++++|||+||.+|+.++.++|+++++++++++....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~--- 300 (380)
T 3doh_A 224 NSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV--- 300 (380)
T ss_dssp TCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG---
T ss_pred CCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh---
Confidence 65432211 123455566666677776655 47999999999999999999999999999999986410
Q ss_pred chHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhh-ccEEEEecCCCCCCChHHHHHHHHHh---
Q 024042 162 DNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV-HDVLIVWGDQDQIFPLKMATELKELL--- 237 (273)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~l~i~g~~D~~~~~~~~~~~~~~~--- 237 (273)
.....+. .|+|+++|++|..+|.+.++.+.+.+
T Consensus 301 -------------------------------------------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~ 337 (380)
T 3doh_A 301 -------------------------------------------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEI 337 (380)
T ss_dssp -------------------------------------------GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHT
T ss_pred -------------------------------------------hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHC
Confidence 0011111 49999999999999999888888877
Q ss_pred cCCcEEEEeCCC--------CCCcCcCChhhHHH--HHHHHhccc
Q 024042 238 GKKARLEIIENT--------SHVPQIENPGLFNS--IVKNFLRGS 272 (273)
Q Consensus 238 ~~~~~~~~~~~~--------gH~~~~~~~~~~~~--~i~~fl~~~ 272 (273)
+.+.++++++++ +|..+. .... .+.+||.++
T Consensus 338 g~~~~~~~~~~~~h~~h~~~~H~~~~----~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 338 GGKVRYTEYEKGFMEKHGWDPHGSWI----PTYENQEAIEWLFEQ 378 (380)
T ss_dssp TCCEEEEEECTTHHHHTTCCTTCTHH----HHHTCHHHHHHHHTC
T ss_pred CCceEEEEecCCcccCCCCCCchhHH----HhcCCHHHHHHHHhh
Confidence 356899999998 675322 2233 778888764
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=172.89 Aligned_cols=239 Identities=12% Similarity=0.031 Sum_probs=145.2
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchh-HhHHHHHHhhcCC-CeEEeecCCCCCCCCCC----C
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI-WQWRKQVQFFAPH-FNVYVPDLIFFGHSTTR----S 99 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~----~ 99 (273)
+...++..||.++.++...++....+++.|+||++||..+... ..|......|.++ |.|+++|+||+|.+... .
T Consensus 481 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~ 560 (751)
T 2xe4_A 481 ERRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIG 560 (751)
T ss_dssp EEEEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTT
T ss_pred EEEEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhcc
Confidence 3445556689999877665433223456799999999765441 2344444455554 99999999999875321 1
Q ss_pred -----ccccHHHHHHHHHHHHHH--hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh
Q 024042 100 -----IQRTELFQAASLGKLLEK--IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL 172 (273)
Q Consensus 100 -----~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (273)
.....++..+.+..+++. .+.++++++|+|+||.+++.++.++|++++++|+.+|..+........... ...
T Consensus 561 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~-~~~ 639 (751)
T 2xe4_A 561 AKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTTMCDPSIP-LTT 639 (751)
T ss_dssp SSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHHHTCTTST-THH
T ss_pred ccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhhhcccCcc-cch
Confidence 112444555555555544 244789999999999999999999999999999999876532110000000 000
Q ss_pred hhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhcc-EEEEecCCCCCCChHHHHHHHHHhc---C---CcEEEE
Q 024042 173 ERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHD-VLIVWGDQDQIFPLKMATELKELLG---K---KARLEI 245 (273)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~i~g~~D~~~~~~~~~~~~~~~~---~---~~~~~~ 245 (273)
..+.....+........+... .+......+..| +|+++|++|..+|++.+.++++.+. . ...+.+
T Consensus 640 ~~~~~~g~p~~~~~~~~~~~~--------sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~ 711 (751)
T 2xe4_A 640 GEWEEWGNPNEYKYYDYMLSY--------SPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNI 711 (751)
T ss_dssp HHTTTTCCTTSHHHHHHHHHH--------CTGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEE
T ss_pred hhHHHcCCCCCHHHHHHHHhc--------ChhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEE
Confidence 001111111111111111110 122223345556 9999999999999999998888771 1 123455
Q ss_pred eCCCCCCcCcCChh--hHHHHHHHHhcccC
Q 024042 246 IENTSHVPQIENPG--LFNSIVKNFLRGSL 273 (273)
Q Consensus 246 ~~~~gH~~~~~~~~--~~~~~i~~fl~~~l 273 (273)
++++||......++ +....+.+||.+++
T Consensus 712 ~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l 741 (751)
T 2xe4_A 712 DMESGHFSAKDRYKFWKESAIQQAFVCKHL 741 (751)
T ss_dssp ETTCCSSCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCcCChhHHHHHHHHHHHHHHHHh
Confidence 59999997655433 33456788887653
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-22 Score=154.37 Aligned_cols=207 Identities=12% Similarity=0.066 Sum_probs=138.8
Q ss_pred eEEEEcC--CCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCC---CCccccHHHHHHHHHHHHHHh-CCccEEEEEec
Q 024042 56 SLVLIHG--FGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTT---RSIQRTELFQAASLGKLLEKI-GVERFSVVGTS 129 (273)
Q Consensus 56 ~vi~~hG--~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~---~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S 129 (273)
+++++|| ++++. ..|..+...|..++.|+++|+||+|.+.. .....+.++.++++.+.++.. ..++++++|||
T Consensus 91 ~l~~~hg~g~~~~~-~~~~~l~~~L~~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~~~p~~l~G~S 169 (319)
T 2hfk_A 91 VLVGCTGTAANGGP-HEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAPVVLLGHA 169 (319)
T ss_dssp EEEEECCCCTTCST-TTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTTSCEEEEEET
T ss_pred cEEEeCCCCCCCcH-HHHHHHHHhcCCCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 8999998 56666 88999999998779999999999998721 234568889999998888877 45789999999
Q ss_pred cchHHHHHHHHhC----CcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhh-hccCCCCChh
Q 024042 130 YGGFVAYHMARMW----PERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLA-VSKNLDIVPD 204 (273)
Q Consensus 130 ~Gg~~a~~~a~~~----~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 204 (273)
+||.+|..+|.++ ++++++++++++...........+........+.....+.....+....... ... .
T Consensus 170 ~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---- 243 (319)
T 2hfk_A 170 GGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLA--G---- 243 (319)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHH--S----
T ss_pred HHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHHHHHHHHHHHH--h----
Confidence 9999999999886 4569999999986543221000000000000000011111111111110000 000 0
Q ss_pred hHHhhhhccEEEEecCCCCCCChHH-HHHHHHHhcCCcEEEEeCCCCCCcCc-CChhhHHHHHHHHhcc
Q 024042 205 FFFNDFVHDVLIVWGDQDQIFPLKM-ATELKELLGKKARLEIIENTSHVPQI-ENPGLFNSIVKNFLRG 271 (273)
Q Consensus 205 ~~~~~~~~p~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 271 (273)
.....+..|+++++| +|..++.+. ...+.+....+.+++.++ +||+.++ ++++++.+.|.+||++
T Consensus 244 ~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~~L~~ 310 (319)
T 2hfk_A 244 PRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDLPHTVADVP-GDHFTMMRDHAPAVAEAVLSWLDA 310 (319)
T ss_dssp CCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSSCSEEEEES-SCTTHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCCCcCCCEEEEEc-CCCCCCccccccchhhcCCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHHHHHh
Confidence 011345669999999 999888765 445554443468999999 7999654 7999999999999974
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=147.85 Aligned_cols=202 Identities=19% Similarity=0.192 Sum_probs=131.7
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-C--eEEeecCCCCCCCCCC---------C---------ccccHHHHHHH
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-F--NVYVPDLIFFGHSTTR---------S---------IQRTELFQAAS 110 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~--~v~~~d~~g~g~s~~~---------~---------~~~~~~~~~~~ 110 (273)
.+.++|||+||++++. ..|+.+++.|.+. + +|+.+|.+++|.+... + ...+....+++
T Consensus 4 ~~~~pvvliHG~~~~~-~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~ 82 (249)
T 3fle_A 4 IKTTATLFLHGYGGSE-RSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYW 82 (249)
T ss_dssp -CCEEEEEECCTTCCG-GGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHH
T ss_pred CCCCcEEEECCCCCCh-hHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHH
Confidence 3467899999999999 9999999999886 4 6999999988864210 0 01133445555
Q ss_pred HHHHHHH----hCCccEEEEEeccchHHHHHHHHhCCc-----ccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCC
Q 024042 111 LGKLLEK----IGVERFSVVGTSYGGFVAYHMARMWPE-----RVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLP 181 (273)
Q Consensus 111 ~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~a~~~~~-----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (273)
+.++++. ++.+++.++||||||.+++.++.++|+ +|+++|+++++......... ............+
T Consensus 83 l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~----~~~~~~~~~~g~p 158 (249)
T 3fle_A 83 IKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNE----NVNEIIVDKQGKP 158 (249)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSS----CTTTSCBCTTCCB
T ss_pred HHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccC----CcchhhhcccCCC
Confidence 5555544 477899999999999999999999874 79999999987665321100 0000000000001
Q ss_pred C-ChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecC------CCCCCChHHHHHHHHHhcCC---cEEEEeCC--C
Q 024042 182 E-SASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGD------QDQIFPLKMATELKELLGKK---ARLEIIEN--T 249 (273)
Q Consensus 182 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~------~D~~~~~~~~~~~~~~~~~~---~~~~~~~~--~ 249 (273)
. ....++.+... ...+.....|+|.|+|+ .|..||...++.+...+... .+.+.+.| +
T Consensus 159 ~~~~~~~~~l~~~----------~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a 228 (249)
T 3fle_A 159 SRMNAAYRQLLSL----------YKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKA 228 (249)
T ss_dssp SSCCHHHHHTGGG----------HHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGG
T ss_pred cccCHHHHHHHHH----------HhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCC
Confidence 1 11112221110 11111123389999998 69999999998887777322 24455644 8
Q ss_pred CCCcCcCChhhHHHHHHHHh
Q 024042 250 SHVPQIENPGLFNSIVKNFL 269 (273)
Q Consensus 250 gH~~~~~~~~~~~~~i~~fl 269 (273)
.|....+++ ++.+.|.+||
T Consensus 229 ~Hs~l~~n~-~V~~~I~~FL 247 (249)
T 3fle_A 229 QHSQLHENK-DVANEIIQFL 247 (249)
T ss_dssp STGGGGGCH-HHHHHHHHHH
T ss_pred chhccccCH-HHHHHHHHHh
Confidence 999888877 7888999997
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=152.89 Aligned_cols=178 Identities=25% Similarity=0.286 Sum_probs=122.5
Q ss_pred CCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC---CeEEeecCC------CCCCCCCCC-------cc---ccHHHHHH
Q 024042 49 HKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH---FNVYVPDLI------FFGHSTTRS-------IQ---RTELFQAA 109 (273)
Q Consensus 49 ~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~---~~v~~~d~~------g~g~s~~~~-------~~---~~~~~~~~ 109 (273)
.+++..|+|||+||+|++. ..|..+.+.|... +.+++++-| |.|.+.... .. .......+
T Consensus 61 ~~~~~~plVI~LHG~G~~~-~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~ 139 (285)
T 4fhz_A 61 APGEATSLVVFLHGYGADG-ADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAAR 139 (285)
T ss_dssp CTTCCSEEEEEECCTTBCH-HHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHH
T ss_pred CCCCCCcEEEEEcCCCCCH-HHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHH
Confidence 3456678999999999998 8888888877653 567776643 344332111 00 11222234
Q ss_pred HHHHHHH----HhC--CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCC
Q 024042 110 SLGKLLE----KIG--VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPES 183 (273)
Q Consensus 110 ~~~~~~~----~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
++.++++ ..+ .++|+++|+|+||.+|+.++.++|+++.++|.+++...... ..
T Consensus 140 ~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~----~~----------------- 198 (285)
T 4fhz_A 140 DLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPE----RL----------------- 198 (285)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHH----HH-----------------
T ss_pred HHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCch----hh-----------------
Confidence 4444443 333 47899999999999999999999999999999887443210 00
Q ss_pred hHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhh
Q 024042 184 ASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGL 260 (273)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~ 260 (273)
... .....|++++||++|.++|.+..+.+.+.+ +.+++++++++.||... +++
T Consensus 199 ----~~~-----------------~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~---~~~ 254 (285)
T 4fhz_A 199 ----AEE-----------------ARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA---PDG 254 (285)
T ss_dssp ----HHH-----------------CCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC---HHH
T ss_pred ----hhh-----------------hhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---HHH
Confidence 000 001129999999999999999888877766 46789999999999853 444
Q ss_pred HHHHHHHHhcccC
Q 024042 261 FNSIVKNFLRGSL 273 (273)
Q Consensus 261 ~~~~i~~fl~~~l 273 (273)
.+.+.+||+++|
T Consensus 255 -l~~~~~fL~~~L 266 (285)
T 4fhz_A 255 -LSVALAFLKERL 266 (285)
T ss_dssp -HHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHC
Confidence 466789998764
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-21 Score=151.30 Aligned_cols=210 Identities=13% Similarity=0.007 Sum_probs=125.7
Q ss_pred CCCCCeEEEEcCCCC---ch-hHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH------h
Q 024042 51 TLKKPSLVLIHGFGP---EA-IWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK------I 118 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~---~~-~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~------~ 118 (273)
.++.|+||++||.+. +. ...|..++..|+. ++.|+++|+|+.+....+ ...++..+.+..+.+. .
T Consensus 109 ~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~~~---~~~~D~~~a~~~l~~~~~~~~~~ 185 (365)
T 3ebl_A 109 AEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYP---CAYDDGWTALKWVMSQPFMRSGG 185 (365)
T ss_dssp SSCCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT---HHHHHHHHHHHHHHHCTTTEETT
T ss_pred CCcceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCCCCCCCCc---HHHHHHHHHHHHHHhCchhhhCC
Confidence 346799999999753 22 1346777777765 599999999976544322 2233333333333321 2
Q ss_pred CCc-cEEEEEeccchHHHHHHHHhCCc---ccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhh
Q 024042 119 GVE-RFSVVGTSYGGFVAYHMARMWPE---RVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLA 194 (273)
Q Consensus 119 ~~~-~i~l~G~S~Gg~~a~~~a~~~~~---~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (273)
+.+ +++|+|+|+||.+|+.++.+.++ +++++|+++|................ . ...............
T Consensus 186 d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~ 257 (365)
T 3ebl_A 186 DAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRLDG------K--YFVTLQDRDWYWKAY 257 (365)
T ss_dssp TTEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTT------T--SSCCHHHHHHHHHHH
T ss_pred CCCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhhhcCC------C--cccCHHHHHHHHHHh
Confidence 345 99999999999999999987765 79999999998776543322111000 0 000111111111111
Q ss_pred hccC-----CCCChhh-HHhhhh----ccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcC----cCC
Q 024042 195 VSKN-----LDIVPDF-FFNDFV----HDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQ----IEN 257 (273)
Q Consensus 195 ~~~~-----~~~~~~~-~~~~~~----~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~----~~~ 257 (273)
.... ....+.. ....+. .|+|+++|++|.+++. ...+.+.+ +.+++++++++++|.++ .++
T Consensus 258 ~~~~~~~~~~~~~p~~~~~~~l~~~~~pP~Li~~G~~D~l~~~--~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~ 335 (365)
T 3ebl_A 258 LPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDR--QLAYADALREDGHHVKVVQCENATVGFYLLPNTVH 335 (365)
T ss_dssp SCTTCCTTSTTTCTTSTTCCCCTTSCCCCEEEEEETTSTTHHH--HHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHH
T ss_pred CCCCCCCCCcccCCCCCcchhhccCCCCCEEEEEcCcccchhH--HHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHH
Confidence 0000 0000000 111222 3899999999976543 34444443 46889999999999765 345
Q ss_pred hhhHHHHHHHHhcccC
Q 024042 258 PGLFNSIVKNFLRGSL 273 (273)
Q Consensus 258 ~~~~~~~i~~fl~~~l 273 (273)
.+++.+.+.+||++++
T Consensus 336 ~~~~~~~i~~Fl~~~~ 351 (365)
T 3ebl_A 336 YHEVMEEISDFLNANL 351 (365)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhh
Confidence 6788999999998753
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-21 Score=146.94 Aligned_cols=217 Identities=14% Similarity=0.072 Sum_probs=133.1
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH---HHHhhcC-CCeEEeecCCCCC--------------CC
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK---QVQFFAP-HFNVYVPDLIFFG--------------HS 95 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~---~~~~l~~-~~~v~~~d~~g~g--------------~s 95 (273)
.|.++.+..+.|+... .++.|+||++||++++. ..|.. +...+.+ ++.|+++|.+++| .+
T Consensus 32 ~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~-~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~ 109 (283)
T 4b6g_A 32 LQCEMKFAVYLPNNPE-NRPLGVIYWLSGLTCTE-QNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAG 109 (283)
T ss_dssp TTEEEEEEEEECCCTT-CCCEEEEEEECCTTCCS-HHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBC
T ss_pred hCCceEEEEEeCCCCC-CCCCCEEEEEcCCCCCc-cchhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCc
Confidence 5677777776543221 45678999999998887 66643 3344444 4999999976333 22
Q ss_pred CCCCc-------ccc-HHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHH
Q 024042 96 TTRSI-------QRT-ELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA 165 (273)
Q Consensus 96 ~~~~~-------~~~-~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~ 165 (273)
..... ... ....++++..+++.. ..++++++|||+||.+|+.++.++|+++++++.++|...........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~~~~ 189 (283)
T 4b6g_A 110 FYLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLVPWGE 189 (283)
T ss_dssp TTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGGGSHHHH
T ss_pred ccccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccccccCcchh
Confidence 11110 011 334456777777766 33789999999999999999999999999999999876643211100
Q ss_pred HhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhh--ccEEEEecCCCCCCChHH-HHHHHHHh---cC
Q 024042 166 LVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV--HDVLIVWGDQDQIFPLKM-ATELKELL---GK 239 (273)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~l~i~g~~D~~~~~~~-~~~~~~~~---~~ 239 (273)
. .+...+.. ... .+ ....+.....++. .|+++++|+.|.+++.+. .+.+.+.+ +.
T Consensus 190 ---~----~~~~~~g~-~~~--------~~---~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~ 250 (283)
T 4b6g_A 190 ---K----AFTAYLGK-DRE--------KW---QQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQ 250 (283)
T ss_dssp ---H----HHHHHHCS-CGG--------GG---GGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHHTC
T ss_pred ---h----hHHhhcCC-chH--------HH---HhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHHHcCC
Confidence 0 00000000 000 00 0112222233332 299999999999987621 34444333 47
Q ss_pred CcEEEEeCCCCCCcCcCChhhHHHHHHHHhcccC
Q 024042 240 KARLEIIENTSHVPQIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 240 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 273 (273)
++++.++|+++|.... .....+...+|+.+.|
T Consensus 251 ~~~~~~~~g~~H~~~~--~~~~l~~~l~~~~~~l 282 (283)
T 4b6g_A 251 PVDVRFHKGYDHSYYF--IASFIGEHIAYHAAFL 282 (283)
T ss_dssp CCEEEEETTCCSSHHH--HHHHHHHHHHHHHTTC
T ss_pred CceEEEeCCCCcCHhH--HHHHHHHHHHHHHHhc
Confidence 8999999999997532 2344566677877654
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=148.18 Aligned_cols=200 Identities=19% Similarity=0.137 Sum_probs=121.7
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHH---HHhhcCC-CeEEeecC--CCCCCCCCC---------
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQ---VQFFAPH-FNVYVPDL--IFFGHSTTR--------- 98 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~---~~~l~~~-~~v~~~d~--~g~g~s~~~--------- 98 (273)
.|..+.+..+.|+.. ..++.|+||++||++++. ..|... .+.+.+. |.|+++|+ ||+|.+...
T Consensus 26 ~~~~~~~~v~~P~~~-~~~~~p~vv~lHG~~~~~-~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~ 103 (282)
T 3fcx_A 26 LNCKMKFAVYLPPKA-ETGKCPALYWLSGLTCTE-QNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGA 103 (282)
T ss_dssp TTEEEEEEEEECGGG-GTSCEEEEEEECCTTCCS-HHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCCCC
T ss_pred cCCeeEEEEEcCCCC-CCCCCCEEEEEcCCCCCc-cchhhcchHHHHhhcCCeEEEEeccccCccccccccccccccCCc
Confidence 677777776653321 134678999999999887 667654 4555554 99999999 666543211
Q ss_pred ----Ccc--------ccHHHHHHHHHHHHH-HhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch
Q 024042 99 ----SIQ--------RTELFQAASLGKLLE-KIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN 163 (273)
Q Consensus 99 ----~~~--------~~~~~~~~~~~~~~~-~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~ 163 (273)
... .......+++..+++ .++. ++++++|||+||.+|+.++.++|++++++++++|.........
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~~ 183 (282)
T 3fcx_A 104 GFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPW 183 (282)
T ss_dssp CTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGGSHH
T ss_pred ccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCcccCch
Confidence 000 112334556666666 4443 7899999999999999999999999999999998776432211
Q ss_pred HHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhh---hccEEEEecCCCCCCChHH--HHHHHHHh-
Q 024042 164 EALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDF---VHDVLIVWGDQDQIFPLKM--ATELKELL- 237 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~l~i~g~~D~~~~~~~--~~~~~~~~- 237 (273)
.. . .+...+... . .......+.....++ ..|+++++|++|.++|... .+.+.+.+
T Consensus 184 ~~--~-----~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~~l~ 244 (282)
T 3fcx_A 184 GK--K-----AFSGYLGTD-Q-----------SKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACT 244 (282)
T ss_dssp HH--H-----HHHHHHC---------------CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHHHHHHH
T ss_pred hH--H-----HHHHhcCCc-h-----------hhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHHHHHHH
Confidence 00 0 000000000 0 000001122222222 4599999999999885433 22333333
Q ss_pred --cCCcEEEEeCCCCCCcC
Q 024042 238 --GKKARLEIIENTSHVPQ 254 (273)
Q Consensus 238 --~~~~~~~~~~~~gH~~~ 254 (273)
+.+++++++++++|.+.
T Consensus 245 ~~g~~~~~~~~~g~~H~~~ 263 (282)
T 3fcx_A 245 EKKIPVVFRLQEDYDHSYY 263 (282)
T ss_dssp HTTCCEEEEEETTCCSSHH
T ss_pred HcCCceEEEECCCCCcCHH
Confidence 46789999999999753
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.8e-22 Score=147.72 Aligned_cols=189 Identities=13% Similarity=0.092 Sum_probs=125.0
Q ss_pred CCCeEEEEcCCCCchhHhHH----HHHHhhcC-CCeEEeecCC---------------------CCCCCCCC------Cc
Q 024042 53 KKPSLVLIHGFGPEAIWQWR----KQVQFFAP-HFNVYVPDLI---------------------FFGHSTTR------SI 100 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~----~~~~~l~~-~~~v~~~d~~---------------------g~g~s~~~------~~ 100 (273)
..|+||++||++++. ..|. .+.+.|.+ +|+|+.+|+| |+|.+... ..
T Consensus 4 ~~~~vl~lHG~g~~~-~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~ 82 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNG-KVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISH 82 (243)
T ss_dssp CCCEEEEECCTTCCH-HHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGG
T ss_pred cCceEEEeCCCCccH-HHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcc
Confidence 468999999999998 7765 46667776 5999999999 44443211 11
Q ss_pred cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCC------cccceEEEecCCCCCCCcchHHHhhhhhhhh
Q 024042 101 QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWP------ERVEKVVIASSGVNMKRGDNEALVKRANLER 174 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~------~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (273)
..+..+.++.+.+.++..+ ++++|+|||+||.+|+.++.+++ ..++.++++++........ ... .
T Consensus 83 ~~d~~~~~~~l~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~-----~~~---~ 153 (243)
T 1ycd_A 83 ELDISEGLKSVVDHIKANG-PYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP-----EHP---G 153 (243)
T ss_dssp GCCCHHHHHHHHHHHHHHC-CCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT-----TST---T
T ss_pred hhhHHHHHHHHHHHHHhcC-CeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc-----ccc---c
Confidence 2356666777777666544 67999999999999999998753 2467777777654321110 000 0
Q ss_pred hhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC-------cEEEEeC
Q 024042 175 IDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK-------ARLEIIE 247 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~-------~~~~~~~ 247 (273)
.. .+. . .+..... ....+..|+++++|++|.++|.+.++.+.+.+ ++ ...++++
T Consensus 154 ~~-~~~---~---------~~~~~~~-----~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~-~~~~g~~~~~~~~~~~ 214 (243)
T 1ycd_A 154 EL-RIT---E---------KFRDSFA-----VKPDMKTKMIFIYGASDQAVPSVRSKYLYDIY-LKAQNGNKEKVLAYEH 214 (243)
T ss_dssp CE-EEC---G---------GGTTTTC-----CCTTCCCEEEEEEETTCSSSCHHHHHHHHHHH-HHHTTTCTTTEEEEEE
T ss_pred cc-ccc---h---------hHHHhcc-----CcccCCCCEEEEEeCCCCccCHHHHHHHHHHh-hhhccccccccEEEec
Confidence 00 000 0 0000000 12335569999999999999999999998887 33 3556677
Q ss_pred CCCCCcCcCChhhHHHHHHHHhccc
Q 024042 248 NTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 248 ~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
++||+...+ +.+.+.+.+||++.
T Consensus 215 ~~gH~~~~~--~~~~~~i~~fl~~~ 237 (243)
T 1ycd_A 215 PGGHMVPNK--KDIIRPIVEQITSS 237 (243)
T ss_dssp SSSSSCCCC--HHHHHHHHHHHHHH
T ss_pred CCCCcCCch--HHHHHHHHHHHHHh
Confidence 799987654 35888899998754
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.9e-20 Score=142.14 Aligned_cols=192 Identities=16% Similarity=0.129 Sum_probs=118.1
Q ss_pred CCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH-HHHHHhhcCC-CeEEeecCC------------CC--CCCC
Q 024042 33 DDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW-RKQVQFFAPH-FNVYVPDLI------------FF--GHST 96 (273)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~------------g~--g~s~ 96 (273)
.+|.++.++.+.|+. ...+.|+||++||++++. ..| ..+.+.+.+. |.|+++|+| |+ |.|.
T Consensus 35 ~~~~~l~~~~~~P~~--~~~~~p~vv~lHG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~ 111 (304)
T 3d0k_A 35 NADRPFTLNTYRPYG--YTPDRPVVVVQHGVLRNG-ADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAG 111 (304)
T ss_dssp CTTCCEEEEEEECTT--CCTTSCEEEEECCTTCCH-HHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCTTS
T ss_pred CCCceEEEEEEeCCC--CCCCCcEEEEeCCCCCCH-HHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccccC
Confidence 477788877654321 124678999999999988 666 6677777665 999999999 55 6654
Q ss_pred CCCc--cccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCc-ccceEEEecCCCCCCCcchHHHhhhhh
Q 024042 97 TRSI--QRTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPE-RVEKVVIASSGVNMKRGDNEALVKRAN 171 (273)
Q Consensus 97 ~~~~--~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~-~v~~~v~~~~~~~~~~~~~~~~~~~~~ 171 (273)
.+.. .....+..+.+..+.+.. +.++++|+|||+||.+++.++.++|+ +++++|+.+++........ .
T Consensus 112 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~~~~~~~------~- 184 (304)
T 3d0k_A 112 NPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGWYTLPTFE------H- 184 (304)
T ss_dssp CBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSSCCCSSTT------S-
T ss_pred CCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcccccCCcc------c-
Confidence 4321 123333333333333322 35789999999999999999999985 7899998775432211100 0
Q ss_pred hhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCC-----------------hHHHHHHH
Q 024042 172 LERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFP-----------------LKMATELK 234 (273)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~-----------------~~~~~~~~ 234 (273)
...... ......+.........|+++++|++|..+. .+..+.+.
T Consensus 185 --~~~~~~-----------------~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (304)
T 3d0k_A 185 --RFPEGL-----------------DGVGLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHRYARARHYY 245 (304)
T ss_dssp --BTTTSS-----------------BTTTCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSHHHHHHHHH
T ss_pred --cCcccc-----------------CCCCCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccHHHHHHHHH
Confidence 000000 000112222333445699999999998742 12222222
Q ss_pred -------HHhcC--CcEEEEeCCCCCCc
Q 024042 235 -------ELLGK--KARLEIIENTSHVP 253 (273)
Q Consensus 235 -------~~~~~--~~~~~~~~~~gH~~ 253 (273)
+..+. +.+++++|++||..
T Consensus 246 ~~l~~~a~~~g~~~~~~~~~~pg~gH~~ 273 (304)
T 3d0k_A 246 EAGQRAAAQRGLPFGWQLQVVPGIGHDG 273 (304)
T ss_dssp HHHHHHHHHHTCCCCCEEEEETTCCSCH
T ss_pred HHHHHHHHhcCCCcceEEEEeCCCCCch
Confidence 23333 38999999999986
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=149.74 Aligned_cols=198 Identities=12% Similarity=0.101 Sum_probs=127.2
Q ss_pred CCCCeEEEEcCCCCchhHh-HH-HHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEe
Q 024042 52 LKKPSLVLIHGFGPEAIWQ-WR-KQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGT 128 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~-~~-~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~ 128 (273)
+.+++|||+||++++. .. |. .+.+.|.+. |+|+++|+||+|.+.. ....++..+.+..+++..+.++++++||
T Consensus 29 ~~~~~VvllHG~~~~~-~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~---~~~~~~l~~~i~~~~~~~g~~~v~lVGh 104 (317)
T 1tca_A 29 SVSKPILLVPGTGTTG-PQSFDSNWIPLSTQLGYTPCWISPPPFMLNDT---QVNTEYMVNAITALYAGSGNNKLPVLTW 104 (317)
T ss_dssp SCSSEEEEECCTTCCH-HHHHTTTHHHHHHTTTCEEEEECCTTTTCSCH---HHHHHHHHHHHHHHHHHTTSCCEEEEEE
T ss_pred CCCCeEEEECCCCCCc-chhhHHHHHHHHHhCCCEEEEECCCCCCCCcH---HHHHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 3567899999999998 65 88 888999875 9999999999987642 2234555666667777777799999999
Q ss_pred ccchHHHHHHHHhCC---cccceEEEecCCCCCCCcchHHHhhhhh--hhhhhhccCCCChHHHHHHhhhhhccCCCCCh
Q 024042 129 SYGGFVAYHMARMWP---ERVEKVVIASSGVNMKRGDNEALVKRAN--LERIDHLMLPESASQLRTLTGLAVSKNLDIVP 203 (273)
Q Consensus 129 S~Gg~~a~~~a~~~~---~~v~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (273)
||||.++..++..++ ++|+++|+++++....... ....... ........ . .......+... . .
T Consensus 105 S~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~--~~~~~~~~~~~~~~~~~-~-~s~f~~~L~~~----~-~--- 172 (317)
T 1tca_A 105 SQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLA--GPLDALAVSAPSVWQQT-T-GSALTTALRNA----G-G--- 172 (317)
T ss_dssp THHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGG--HHHHHTTCBCHHHHHTB-T-TCHHHHHHHHT----T-T---
T ss_pred ChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcch--hhhhhhhhcCchHHhhC-c-CcHHHHHHHhc----C-C---
Confidence 999999999988775 7899999999875433211 1111000 00000000 0 00001111000 0 0
Q ss_pred hhHHhhhhccEEEEecCCCCCCChHH--HHHHHHHhcCCcEEEEe-------CCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 204 DFFFNDFVHDVLIVWGDQDQIFPLKM--ATELKELLGKKARLEII-------ENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 204 ~~~~~~~~~p~l~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.....|+++++|+.|.++++.. .+.....+ ++.+.+.+ ++.+|..+.++|+. .+.+.+||+.
T Consensus 173 ----~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l-~~a~~~~~~~~~~~~~~~gH~~~l~~p~~-~~~v~~~L~~ 243 (317)
T 1tca_A 173 ----LTQIVPTTNLYSATDEIVQPQVSNSPLDSSYL-FNGKNVQAQAVCGPLFVIDHAGSLTSQFS-YVVGRSALRS 243 (317)
T ss_dssp ----TBCSSCEEEEECTTCSSSCCCCSSSTTSTTCC-BTSEEEEHHHHHCTTCCCCTTHHHHBHHH-HHHHHHHHHC
T ss_pred ----CCCCCCEEEEEeCCCCeECCccccccchhhhc-cCCccEEeeeccCCCCccCcccccCCHHH-HHHHHHHhcC
Confidence 0123489999999999998765 22212222 23444443 47899998888875 4677888875
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-21 Score=141.70 Aligned_cols=190 Identities=15% Similarity=0.204 Sum_probs=126.5
Q ss_pred ceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC---CeEEeecCCCC--------------CCCCCC
Q 024042 36 TTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH---FNVYVPDLIFF--------------GHSTTR 98 (273)
Q Consensus 36 ~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~---~~v~~~d~~g~--------------g~s~~~ 98 (273)
..+.|.... +..+.+++|||+||+|++. ..|..+++.+... +.+++++-|-. ......
T Consensus 23 ~~l~y~ii~----P~~~~~~~VI~LHG~G~~~-~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~ 97 (246)
T 4f21_A 23 NAMNYELME----PAKQARFCVIWLHGLGADG-HDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLD 97 (246)
T ss_dssp CCCCEEEEC----CSSCCCEEEEEEEC--CCC-CCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC-
T ss_pred CCcCceEeC----CCCcCCeEEEEEcCCCCCH-HHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCccccccccccc
Confidence 356676665 3345677999999999998 8888888877643 66777764321 111100
Q ss_pred C-------ccccHHHHHHHHHHHHHHh-----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHH
Q 024042 99 S-------IQRTELFQAASLGKLLEKI-----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL 166 (273)
Q Consensus 99 ~-------~~~~~~~~~~~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~ 166 (273)
. ........++.+..+++.. +.++++++|+|+||.+|+.++.++|+++.+++.+++...... ..
T Consensus 98 ~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~----~~ 173 (246)
T 4f21_A 98 ANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWD----NF 173 (246)
T ss_dssp --CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHH----HH
T ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccc----cc
Confidence 0 0112334444555555432 448899999999999999999999999999999988653211 00
Q ss_pred hhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEE
Q 024042 167 VKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARL 243 (273)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~ 243 (273)
... . . ......|++++||++|+++|.+.++.+.+.+ +.++++
T Consensus 174 ~~~---------~---~-----------------------~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~ 218 (246)
T 4f21_A 174 KGK---------I---T-----------------------SINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEY 218 (246)
T ss_dssp STT---------C---C-----------------------GGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEE
T ss_pred ccc---------c---c-----------------------ccccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEE
Confidence 000 0 0 0001229999999999999999888888777 356889
Q ss_pred EEeCCCCCCcCcCChhhHHHHHHHHhcccC
Q 024042 244 EIIENTSHVPQIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 244 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 273 (273)
..+++.||... +++ .+.+.+||+++|
T Consensus 219 ~~y~g~gH~i~---~~~-l~~~~~fL~k~l 244 (246)
T 4f21_A 219 KHYVGMQHSVC---MEE-IKDISNFIAKTF 244 (246)
T ss_dssp EEESSCCSSCC---HHH-HHHHHHHHHHHT
T ss_pred EEECCCCCccC---HHH-HHHHHHHHHHHh
Confidence 99999999753 444 466889998865
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=147.48 Aligned_cols=97 Identities=14% Similarity=0.150 Sum_probs=83.6
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC-ccEEEEEec
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV-ERFSVVGTS 129 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S 129 (273)
++++++|||+||++++. ..|..+.+.|. +.|+++|+++ .....+.+++++++.+.++.+.. ++++++|||
T Consensus 21 ~~~~~~l~~~hg~~~~~-~~~~~~~~~L~--~~v~~~d~~~------~~~~~~~~~~a~~~~~~i~~~~~~~~~~l~GhS 91 (283)
T 3tjm_A 21 QSSERPLFLVHPIEGST-TVFHSLASRLS--IPTYGLQCTR------AAPLDSIHSLAAYYIDCIRQVQPEGPYRVAGYS 91 (283)
T ss_dssp CSSSCCEEEECCTTCCS-GGGHHHHHHCS--SCEEEECCCT------TSCCSCHHHHHHHHHHHHTTTCCSSCCEEEEET
T ss_pred CCCCCeEEEECCCCCCH-HHHHHHHHhcC--ceEEEEecCC------CCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 45678999999999999 99999999997 9999999974 22346889999999999988864 789999999
Q ss_pred cchHHHHHHHHhC---Ccccc---eEEEecCCC
Q 024042 130 YGGFVAYHMARMW---PERVE---KVVIASSGV 156 (273)
Q Consensus 130 ~Gg~~a~~~a~~~---~~~v~---~~v~~~~~~ 156 (273)
|||.+|+.+|.+. ++++. +++++++..
T Consensus 92 ~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 92 YGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 124 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCT
T ss_pred HhHHHHHHHHHHHHHcCCCCCccceEEEEcCCc
Confidence 9999999999866 77888 999998754
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.86 E-value=9.1e-22 Score=144.49 Aligned_cols=204 Identities=12% Similarity=0.079 Sum_probs=127.6
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC-ccEEEEEeccc
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV-ERFSVVGTSYG 131 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~G 131 (273)
++++|+++||++++. ..|..+.+.|.+ ++|+.+|+||+|. .++++.+.++.+.. ++++++|||+|
T Consensus 16 ~~~~l~~~hg~~~~~-~~~~~~~~~l~~-~~v~~~d~~g~~~------------~~~~~~~~i~~~~~~~~~~l~G~S~G 81 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYG-LMYQNLSSRLPS-YKLCAFDFIEEED------------RLDRYADLIQKLQPEGPLTLFGYSAG 81 (230)
T ss_dssp CSEEEEEECCTTCCG-GGGHHHHHHCTT-EEEEEECCCCSTT------------HHHHHHHHHHHHCCSSCEEEEEETHH
T ss_pred CCCCEEEECCCCCch-HHHHHHHHhcCC-CeEEEecCCCHHH------------HHHHHHHHHHHhCCCCCeEEEEECHh
Confidence 457899999999998 899999999988 9999999998763 24566666777764 68999999999
Q ss_pred hHHHHHHHHhCC---cccceEEEecCCCCCCCcchHHHhhhhhhhhhh---hccCCCChHHHHHHhhhhhccCCCCCh-h
Q 024042 132 GFVAYHMARMWP---ERVEKVVIASSGVNMKRGDNEALVKRANLERID---HLMLPESASQLRTLTGLAVSKNLDIVP-D 204 (273)
Q Consensus 132 g~~a~~~a~~~~---~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 204 (273)
|.+|+.++.+.+ +++.+++++++...................... ...........+............... .
T Consensus 82 g~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T 1jmk_C 82 CSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYVNL 161 (230)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcChhhhhhhhHHHHHHHHHHHHHHHHHhhhc
Confidence 999999998764 579999999876443211000000000000000 000000000111100000000000000 0
Q ss_pred hHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCC--CcCcCChhhHHHHHHHHhccc
Q 024042 205 FFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSH--VPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 205 ~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH--~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.....+..|+++++|++|..++ +....+.+....+.+++.+++ || ++..++++.+.+.|.+||.++
T Consensus 162 ~~~~~~~~P~l~i~g~~D~~~~-~~~~~w~~~~~~~~~~~~i~g-~H~~~~~~~~~~~~~~~i~~~l~~~ 229 (230)
T 1jmk_C 162 ISTGQVKADIDLLTSGADFDIP-EWLASWEEATTGAYRMKRGFG-THAEMLQGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp CCCSCBSSEEEEEECSSCCCCC-TTEECSGGGBSSCEEEEECSS-CGGGTTSHHHHHHHHHHHHHHHTCB
T ss_pred cccccccccEEEEEeCCCCCCc-cccchHHHhcCCCeEEEEecC-ChHHHcCcHhHHHHHHHHHHHHhhc
Confidence 0123456699999999999887 333344444435689999995 99 777778899999999999764
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.3e-20 Score=139.30 Aligned_cols=197 Identities=16% Similarity=0.107 Sum_probs=124.7
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH-------HHHhhcC-----CCeEEeecCCCCCCCCCCCcc
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK-------QVQFFAP-----HFNVYVPDLIFFGHSTTRSIQ 101 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~-------~~~~l~~-----~~~v~~~d~~g~g~s~~~~~~ 101 (273)
+|..+.++.+.|+.....++.|+||++||++++. ..|.. +++.|.+ .+.|+.+|+++++.+......
T Consensus 42 ~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~-~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~~~~ 120 (268)
T 1jjf_A 42 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSE-NDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYE 120 (268)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCT-TTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSCHHH
T ss_pred cCCceEEEEEeCCCCCCCCCccEEEEECCCCCCc-chhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccccccHH
Confidence 5667777766543322345679999999988765 44432 3555542 499999999988754321111
Q ss_pred ccHHHHHHHHHHHHHH-hC----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhh
Q 024042 102 RTELFQAASLGKLLEK-IG----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERID 176 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~-~~----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (273)
...++.++++..+++. +. .++++++|||+||.+|+.++.++|+++++++++++...... ...
T Consensus 121 ~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~--~~~----------- 187 (268)
T 1jjf_A 121 NFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYP--NER----------- 187 (268)
T ss_dssp HHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCC--HHH-----------
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCc--hhh-----------
Confidence 1112234555555553 33 37899999999999999999999999999999998654321 000
Q ss_pred hccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhc-cEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCC
Q 024042 177 HLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVH-DVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHV 252 (273)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~ 252 (273)
.+ .... . ...... |+++++|++|.+++. .+.+.+.+ +.+++++++++++|.
T Consensus 188 -~~-~~~~-------------------~--~~~~~~pp~li~~G~~D~~v~~--~~~~~~~l~~~g~~~~~~~~~g~~H~ 242 (268)
T 1jjf_A 188 -LF-PDGG-------------------K--AAREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNINHVYWLIQGGGHD 242 (268)
T ss_dssp -HC-TTTT-------------------H--HHHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCCEEEEETTCCSS
T ss_pred -hc-Ccch-------------------h--hhhhcCceEEEEecCCCCCccH--HHHHHHHHHHCCCceEEEEcCCCCcC
Confidence 00 0000 0 011122 499999999999874 44444444 467899999999998
Q ss_pred cCcCChhhHHHHHHHHhcc
Q 024042 253 PQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 253 ~~~~~~~~~~~~i~~fl~~ 271 (273)
... .......+.+||.+
T Consensus 243 ~~~--~~~~~~~~~~~l~~ 259 (268)
T 1jjf_A 243 FNV--WKPGLWNFLQMADE 259 (268)
T ss_dssp HHH--HHHHHHHHHHHHHH
T ss_pred HhH--HHHHHHHHHHHHHh
Confidence 532 12334556677754
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-21 Score=142.86 Aligned_cols=195 Identities=9% Similarity=-0.014 Sum_probs=127.8
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC-CccEEEEEecc
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG-VERFSVVGTSY 130 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~ 130 (273)
+.+++|+++||++++. ..|..+...|..++.|+++|+||++ +.++++.+.++.+. .++++++||||
T Consensus 20 ~~~~~l~~~hg~~~~~-~~~~~~~~~l~~~~~v~~~d~~g~~------------~~~~~~~~~i~~~~~~~~~~l~GhS~ 86 (244)
T 2cb9_A 20 QGGKNLFCFPPISGFG-IYFKDLALQLNHKAAVYGFHFIEED------------SRIEQYVSRITEIQPEGPYVLLGYSA 86 (244)
T ss_dssp CCSSEEEEECCTTCCG-GGGHHHHHHTTTTSEEEEECCCCST------------THHHHHHHHHHHHCSSSCEEEEEETH
T ss_pred CCCCCEEEECCCCCCH-HHHHHHHHHhCCCceEEEEcCCCHH------------HHHHHHHHHHHHhCCCCCEEEEEECH
Confidence 3567999999999998 8999999999877999999999874 23566777777775 47899999999
Q ss_pred chHHHHHHHHhC---CcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHH---HHhhhhhccCCCCChh
Q 024042 131 GGFVAYHMARMW---PERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLR---TLTGLAVSKNLDIVPD 204 (273)
Q Consensus 131 Gg~~a~~~a~~~---~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 204 (273)
||.+|+.+|.+. ++++.+++++++............ .......+.+.....+. ......... .
T Consensus 87 Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 155 (244)
T 2cb9_A 87 GGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITADTE-----NDDSAAYLPEAVRETVMQKKRCYQEYWAQ------L 155 (244)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCCC------------CCSCHHHHHHHTHHHHHHHHHHHH------C
T ss_pred hHHHHHHHHHHHHHcCCCccEEEEEcCCCCccccccccc-----HHHHHHHhHHHHHHHHHHHHHHHHHHHHh------h
Confidence 999999999876 567999999987654211000000 00000000000000000 000000000 0
Q ss_pred hHHhhhhccEEEEecC--CCCCCChHHHHHHHHHhcCCcEEEEeCCCCC--CcCcCChhhHHHHHHHHhccc
Q 024042 205 FFFNDFVHDVLIVWGD--QDQIFPLKMATELKELLGKKARLEIIENTSH--VPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 205 ~~~~~~~~p~l~i~g~--~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH--~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.....+..|+++++|+ +|.+ +.+....+.+....+.+++.++ +|| ++..++++.+.+.|.+||.+.
T Consensus 156 ~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~~~~~~~~~i~-ggH~~~~~~~~~~~~~~~i~~~L~~~ 225 (244)
T 2cb9_A 156 INEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAAEEGYAEYTGY-GAHKDMLEGEFAEKNANIILNILDKI 225 (244)
T ss_dssp CCCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGBSSCEEEEECS-SBGGGTTSHHHHHHHHHHHHHHHHTC
T ss_pred ccCCCcCCCEEEEEccCccccc-cccchhHHHHhcCCCCEEEEec-CChHHHcChHHHHHHHHHHHHHHhcC
Confidence 0123456699999999 8874 4444445555443478999999 599 666678999999999999753
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.7e-21 Score=151.71 Aligned_cols=156 Identities=18% Similarity=0.135 Sum_probs=109.1
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCC---------------------cc-------c
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRS---------------------IQ-------R 102 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~---------------------~~-------~ 102 (273)
++.|+|||+||++++. ..|..+++.|++. |.|+++|+||+|.|.... .. .
T Consensus 96 ~~~P~Vv~~HG~~~~~-~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 174 (383)
T 3d59_A 96 EKYPLVVFSHGLGAFR-TLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNE 174 (383)
T ss_dssp SCEEEEEEECCTTCCT-TTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHH
T ss_pred CCCCEEEEcCCCCCCc-hHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHH
Confidence 4678999999999998 8899999999877 999999999998864210 00 0
Q ss_pred cHHHHHHHHHHHHHHh--------------------------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCC
Q 024042 103 TELFQAASLGKLLEKI--------------------------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV 156 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~--------------------------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~ 156 (273)
.....++++..+++.+ +.++++++|||+||.+|+.++...+ +++++|+++++.
T Consensus 175 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~~ 253 (383)
T 3d59_A 175 QVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAWM 253 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCcc
Confidence 1122244555544432 2358999999999999999988865 599999998754
Q ss_pred CCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHH
Q 024042 157 NMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKEL 236 (273)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~ 236 (273)
.... ...+.++..|+|+++|++|... ...+.+.+.
T Consensus 254 ~p~~-------------------------------------------~~~~~~i~~P~Lii~g~~D~~~--~~~~~~~~l 288 (383)
T 3d59_A 254 FPLG-------------------------------------------DEVYSRIPQPLFFINSEYFQYP--ANIIKMKKC 288 (383)
T ss_dssp TTCC-------------------------------------------GGGGGSCCSCEEEEEETTTCCH--HHHHHHHTT
T ss_pred CCCc-------------------------------------------hhhhccCCCCEEEEecccccch--hhHHHHHHH
Confidence 2110 0011334459999999999853 333333222
Q ss_pred h--cCCcEEEEeCCCCCCcC
Q 024042 237 L--GKKARLEIIENTSHVPQ 254 (273)
Q Consensus 237 ~--~~~~~~~~~~~~gH~~~ 254 (273)
. +.+.+++++++++|..+
T Consensus 289 ~~~~~~~~~~~~~g~~H~~~ 308 (383)
T 3d59_A 289 YSPDKERKMITIRGSVHQNF 308 (383)
T ss_dssp CCTTSCEEEEEETTCCGGGG
T ss_pred HhcCCceEEEEeCCCcCCCc
Confidence 1 25788999999999864
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-19 Score=153.41 Aligned_cols=236 Identities=14% Similarity=0.066 Sum_probs=145.6
Q ss_pred cCCcce--EEeecCCccCCCCCCCCCeEEEEcCCCCchhH----------------------------------------
Q 024042 32 IDDETT--LHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIW---------------------------------------- 69 (273)
Q Consensus 32 ~~~g~~--l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~---------------------------------------- 69 (273)
..||.+ |....+.|+. .++.|+||..||++.....
T Consensus 180 ~~DG~~d~L~a~l~~P~~---~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~ 256 (763)
T 1lns_A 180 EQRGENDLIKIQIIRPKS---TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKELP 256 (763)
T ss_dssp TCSSSCCEEEEEEEECCC---SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCCC
T ss_pred CCCCCeeeEEEEEEecCC---CCcccEEEecCCcCCCCcccccccccccccccccccCcccccccccccccccccccccc
Confidence 458998 9888876432 3456889999988754201
Q ss_pred -------hH-----HHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC-----------------
Q 024042 70 -------QW-----RKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG----------------- 119 (273)
Q Consensus 70 -------~~-----~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~----------------- 119 (273)
.| ......+.++ |.|+++|+||+|.|.+....... ..++|+.++++.+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~~~~~~-~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q 335 (763)
T 1lns_A 257 IVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTSGDY-QQIYSMTAVIDWLNGRARAYTSRKKTHEIKA 335 (763)
T ss_dssp EESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCTTSH-HHHHHHHHHHHHHTTSSCEESSTTCCCEECC
T ss_pred ccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcCCCCCH-HHHHHHHHHHHHHhhcccccccccccccccc
Confidence 01 0123455555 99999999999999876543343 45778888888775
Q ss_pred ---CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc--------chHHHhh----hhhhhhhhhccCCCC-
Q 024042 120 ---VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG--------DNEALVK----RANLERIDHLMLPES- 183 (273)
Q Consensus 120 ---~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~--------~~~~~~~----~~~~~~~~~~~~~~~- 183 (273)
.++|+++|||+||.+++.+|..+|+.++++|..++....... ....... ...............
T Consensus 336 ~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~ 415 (763)
T 1lns_A 336 SWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADF 415 (763)
T ss_dssp TTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHH
T ss_pred cCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhcCcchh
Confidence 148999999999999999999999999999999886531100 0000000 000000000000000
Q ss_pred ---hHHH----HHHhhhhhccCC-------CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC--cEEEEeC
Q 024042 184 ---ASQL----RTLTGLAVSKNL-------DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK--ARLEIIE 247 (273)
Q Consensus 184 ---~~~~----~~~~~~~~~~~~-------~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~ 247 (273)
.... ..+......... ...+.....++..|+|+++|..|..++++.+..+++.+ ++ .+..++.
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al-~~~~~~~l~i~ 494 (763)
T 1lns_A 416 LKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKAL-PEGHAKHAFLH 494 (763)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHS-CTTCCEEEEEE
T ss_pred hhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhh-ccCCCeEEEEe
Confidence 0000 000000000000 11233455677889999999999999999999999998 42 2334456
Q ss_pred CCCCCcCcC-ChhhHHHHHHHHhccc
Q 024042 248 NTSHVPQIE-NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 248 ~~gH~~~~~-~~~~~~~~i~~fl~~~ 272 (273)
++||..+.+ .+..+.+.+.+||+++
T Consensus 495 ~~gH~~~~~~~~~~~~~~i~~Ffd~~ 520 (763)
T 1lns_A 495 RGAHIYMNSWQSIDFSETINAYFVAK 520 (763)
T ss_dssp SCSSCCCTTBSSCCHHHHHHHHHHHH
T ss_pred CCcccCccccchHHHHHHHHHHHHHH
Confidence 789987554 4556778888888754
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.85 E-value=4.4e-21 Score=144.06 Aligned_cols=103 Identities=15% Similarity=0.158 Sum_probs=78.4
Q ss_pred CCCeEEEEcCCCCchh--HhHHHHHHhhcCC---CeEEeecCCCCCCCCCCCcc--ccHHHHHHHHHHHHHHhC-C-ccE
Q 024042 53 KKPSLVLIHGFGPEAI--WQWRKQVQFFAPH---FNVYVPDLIFFGHSTTRSIQ--RTELFQAASLGKLLEKIG-V-ERF 123 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~--~~~~~~~~~l~~~---~~v~~~d~~g~g~s~~~~~~--~~~~~~~~~~~~~~~~~~-~-~~i 123 (273)
..++|||+||++++.. ..|..+.+.|++. +.|+++|+ |+|.|...... .+..+.++++.+.++... . +++
T Consensus 4 ~~~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~ 82 (279)
T 1ei9_A 4 APLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGY 82 (279)
T ss_dssp SSCCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTCE
T ss_pred CCCcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhccCCE
Confidence 4467999999987641 4688898888764 49999998 99987522111 355566666666665421 1 789
Q ss_pred EEEEeccchHHHHHHHHhCCcc-cceEEEecCCC
Q 024042 124 SVVGTSYGGFVAYHMARMWPER-VEKVVIASSGV 156 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~~~~~-v~~~v~~~~~~ 156 (273)
+++||||||.+|..++.++|++ |+++|+++++.
T Consensus 83 ~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 83 NAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp EEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred EEEEECHHHHHHHHHHHHcCCcccceEEEecCcc
Confidence 9999999999999999999984 99999998654
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.84 E-value=6.3e-21 Score=151.08 Aligned_cols=121 Identities=16% Similarity=0.027 Sum_probs=81.8
Q ss_pred eEEeecCCccCCCCCCCCCeEEEEcCCCCchhHh-----------HHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc---
Q 024042 37 TLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQ-----------WRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ--- 101 (273)
Q Consensus 37 ~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~-----------~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~--- 101 (273)
.+..+...|+.....++.|+||++||++++. .. |..++..|.+. |.|+++|+||+|.|......
T Consensus 62 ~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~ 140 (397)
T 3h2g_A 62 TASGVLLIPGGERCSGPYPLLGWGHPTEALR-AQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLH 140 (397)
T ss_dssp EEEEEEEEEECTTCCSCEEEEEEECCCCCBT-TCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTC
T ss_pred EEEEEEEeCCCCCCCCCCcEEEEeCCCcCCC-CcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhh
Confidence 3444444433222245678999999998775 32 55667777655 99999999999998644322
Q ss_pred -----ccHHHHHHHHHHHHHHhCC---ccEEEEEeccchHHHHHHHHhC-Cc-----ccceEEEecCCCCC
Q 024042 102 -----RTELFQAASLGKLLEKIGV---ERFSVVGTSYGGFVAYHMARMW-PE-----RVEKVVIASSGVNM 158 (273)
Q Consensus 102 -----~~~~~~~~~~~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~~-~~-----~v~~~v~~~~~~~~ 158 (273)
....+.++++..+++.++. ++++++|||+||.+++.++... ++ .+.+++..+++.+.
T Consensus 141 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~l 211 (397)
T 3h2g_A 141 SASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYAL 211 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSSH
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccccH
Confidence 2344556666777777766 7999999999999998887332 21 46666666655443
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.9e-19 Score=133.56 Aligned_cols=201 Identities=11% Similarity=0.095 Sum_probs=123.5
Q ss_pred CCCCCeEEEEcCCCCchhHhHH-HHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEe
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWR-KQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGT 128 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~-~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~ 128 (273)
...+++|||+||++++....|. .+.+.|.+. |+|+.+|+||||.++. ....++..+.+..+++..+.++++|+||
T Consensus 62 ~~~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~---~~~~~~la~~I~~l~~~~g~~~v~LVGH 138 (316)
T 3icv_A 62 SSVSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLNDT---QVNTEYMVNAITTLYAGSGNNKLPVLTW 138 (316)
T ss_dssp TBCSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSCH---HHHHHHHHHHHHHHHHHTTSCCEEEEEE
T ss_pred CCCCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCcH---HHHHHHHHHHHHHHHHHhCCCceEEEEE
Confidence 3467899999999988645787 888899875 9999999999997542 2344556667777777778899999999
Q ss_pred ccchHHHHHHHHhC---CcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhh
Q 024042 129 SYGGFVAYHMARMW---PERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDF 205 (273)
Q Consensus 129 S~Gg~~a~~~a~~~---~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (273)
||||.++..++..+ +++|+++|+++++.....................+ +.+ ....++.+.... ...
T Consensus 139 SmGGlvA~~al~~~p~~~~~V~~lV~lapp~~Gt~~a~l~~~~~~~~~a~~q-~~~-gS~fl~~Ln~~~-----~~~--- 208 (316)
T 3icv_A 139 SQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVWQ-QTT-GSALTTALRNAG-----GLT--- 208 (316)
T ss_dssp THHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBSCC------CCCCHHHHH-TBT-TCHHHHHHHHTT-----TTB---
T ss_pred CHHHHHHHHHHHhccccchhhceEEEECCCCCCchhhhhhhhccccChhHHh-hCC-CCHHHHHHhhcC-----CCC---
Confidence 99999998777765 58999999999876644321110000000000000 001 111112111100 000
Q ss_pred HHhhhhccEEEEecCCCCCCChHH--HHHHHHHhcCCcEEEEeC-------CCCCCcCcCChhhHHHHHHHHhc
Q 024042 206 FFNDFVHDVLIVWGDQDQIFPLKM--ATELKELLGKKARLEIIE-------NTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 206 ~~~~~~~p~l~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~~~~-------~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
-..|...|++..|.+|.+.. ...-...+ +..+-+.+. ..+|..+.-+|. +...+.+-|+
T Consensus 209 ----~~v~~tsI~S~~D~iV~P~~~~g~~as~~L-~g~~Ni~vqd~Cp~~~~~~H~~~~~dp~-v~~~V~~aL~ 276 (316)
T 3icv_A 209 ----QIVPTTNLYSATDEIVQPQVSNSPLDSSYL-FNGKNVQAQAVCGPLFVIDHAGSLTSQF-SYVVGRSALR 276 (316)
T ss_dssp ----CSSCEEEEECTTCSSSCCCCSSSTTSTTCC-BTSEEEEHHHHHCTTCCCCTTHHHHBHH-HHHHHHHHHH
T ss_pred ----CCCcEEEEEcCCCCCccCCcccCcccceec-CCCceEEEeccCCCCCccCCcCccCCHH-HHHHHHHHhc
Confidence 01289999999999996544 10000112 344656652 579998777675 3445555554
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.3e-20 Score=147.28 Aligned_cols=163 Identities=20% Similarity=0.283 Sum_probs=118.9
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-C---eEEeecCCCCCCC-----CCC-----------------------
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-F---NVYVPDLIFFGHS-----TTR----------------------- 98 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~---~v~~~d~~g~g~s-----~~~----------------------- 98 (273)
.+++++|||+||++++. ..|..+++.|.+. | +|+++|++|+|.| +..
T Consensus 19 ~~~~ppVVLlHG~g~s~-~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~ 97 (484)
T 2zyr_A 19 AEDFRPVVFVHGLAGSA-GQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDK 97 (484)
T ss_dssp --CCCCEEEECCTTCCG-GGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHH
T ss_pred CCCCCEEEEECCCCCCH-HHHHHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccccccccccc
Confidence 45678999999999999 8999999999876 8 7999999999976 100
Q ss_pred --------CccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCC---cccceEEEecCCCCCCCcchHHHh
Q 024042 99 --------SIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWP---ERVEKVVIASSGVNMKRGDNEALV 167 (273)
Q Consensus 99 --------~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~---~~v~~~v~~~~~~~~~~~~~~~~~ 167 (273)
......++..+++.+++++++.++++++||||||.+++.++.++| ++++++|+++++....
T Consensus 98 v~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~~d-------- 169 (484)
T 2zyr_A 98 ILSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWGVD-------- 169 (484)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCSEE--------
T ss_pred cccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccccc--------
Confidence 011244556677778888888899999999999999999999987 4899999999865410
Q ss_pred hhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCC----CCChHHHHHHHHHhcC-CcE
Q 024042 168 KRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQ----IFPLKMATELKELLGK-KAR 242 (273)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~----~~~~~~~~~~~~~~~~-~~~ 242 (273)
.+ ...+++.+.|+.|. ..+.. .+ + +.+
T Consensus 170 ------------~p----------------------------~g~~~L~ilG~~d~~p~V~~pss-------~L-~~ga~ 201 (484)
T 2zyr_A 170 ------------AP----------------------------EGIPTLAVFGNPKALPALGLPEE-------KV-VYNAT 201 (484)
T ss_dssp ------------CC----------------------------TTSCEEEEEECGGGSCCSSCCSS-------CC-EETSE
T ss_pred ------------cC----------------------------cCCHHHHHhCCCCcCCcccChhH-------hc-CCCce
Confidence 00 00145555565442 11111 23 4 667
Q ss_pred EEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 243 LEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 243 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+++++++|..+.++++.+ +.+.+||..
T Consensus 202 ~v~i~~a~H~~ll~dp~v~-~~Vl~fL~~ 229 (484)
T 2zyr_A 202 NVYFNNMTHVQLCTSPETF-AVMFEFING 229 (484)
T ss_dssp EEEETTCCHHHHHHCHHHH-HHHHHHHHS
T ss_pred EEEECCCCccccccCHHHH-HHHHHHhcc
Confidence 8888999999888888655 458888864
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.80 E-value=7.2e-21 Score=151.26 Aligned_cols=158 Identities=15% Similarity=0.158 Sum_probs=112.5
Q ss_pred CCCCeEEEEcCCCCchhHhHHH-HHHhhcC--CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh----C--Ccc
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRK-QVQFFAP--HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI----G--VER 122 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~-~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~--~~~ 122 (273)
.++|+||++||++++....|.. +.+.|.+ +|+|+++|+||+|.|.......+.+..++++.++++.+ + .++
T Consensus 68 ~~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~~~~~~~~~~dl~~~i~~l~~~~g~~~~~ 147 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNIRVVGAEVAYLVQVLSTSLNYAPEN 147 (432)
T ss_dssp TTSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchhhHhhHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 4678999999998887336766 7777764 59999999999999874333345566677777777766 4 589
Q ss_pred EEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCC
Q 024042 123 FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIV 202 (273)
Q Consensus 123 i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (273)
++++||||||.+|+.++.++|++++++++++|.......... . . . .
T Consensus 148 i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p~~~~~~~----------~-~----------------------~-l 193 (432)
T 1gpl_A 148 VHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEPYFQDTPE----------E-V----------------------R-L 193 (432)
T ss_dssp EEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCTTTTTCCT----------T-T----------------------S-C
T ss_pred EEEEEeCHHHHHHHHHHHhcccccceeEEeccccccccCCCh----------h-h----------------------c-c
Confidence 999999999999999999999999999999886554221000 0 0 0 0
Q ss_pred hhhHHhhhhccEEEEecCCCCCCCh-HHHHHHHHHhcCCcEEEEeCCCCCC
Q 024042 203 PDFFFNDFVHDVLIVWGDQDQIFPL-KMATELKELLGKKARLEIIENTSHV 252 (273)
Q Consensus 203 ~~~~~~~~~~p~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~ 252 (273)
......++.+||+..|.++|. ... +.+ +-..+..+|++||.
T Consensus 194 ----~~~da~~V~vIHt~~d~lVP~~~~g--~~~---~lg~~dfypngg~~ 235 (432)
T 1gpl_A 194 ----DPSDAKFVDVIHTDISPILPSLGFG--MSQ---KVGHMDFFPNGGKD 235 (432)
T ss_dssp ----CGGGSSEEEEECSCCSCHHHHCCCB--CSS---CCSSEEEEEGGGSS
T ss_pred ----CcCCCceEEEEEcCCcccccccccc--ccc---cccceEEccCCCCC
Confidence 001122799999999998876 110 011 23556678999995
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.3e-18 Score=131.39 Aligned_cols=214 Identities=15% Similarity=0.118 Sum_probs=121.9
Q ss_pred CCCCeEEEEcCCCCchh--------HhHHHHHHhh--cCCCeEEeecCCCCCCCCCCCccc--------cHHHHHHHHHH
Q 024042 52 LKKPSLVLIHGFGPEAI--------WQWRKQVQFF--APHFNVYVPDLIFFGHSTTRSIQR--------TELFQAASLGK 113 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~--------~~~~~~~~~l--~~~~~v~~~d~~g~g~s~~~~~~~--------~~~~~~~~~~~ 113 (273)
++.|+|++.||...... ..+. ....| .++|.|+++|+||+|.|......+ +..+.++++..
T Consensus 72 ~~~PvV~~~HG~~~~~~~~ps~~~~~~~~-~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~ 150 (377)
T 4ezi_A 72 GQVGIISYQHGTRFERNDVPSRNNEKNYI-YLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKE 150 (377)
T ss_dssp SCEEEEEEECCCCCSTTCSGGGCCGGGHH-HHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCcCCcccCCCcCcccchH-HHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHH
Confidence 46789999999874320 0122 23344 445999999999999988532222 12222333444
Q ss_pred HHHHhCC---ccEEEEEeccchHHHHHHHHhCCc-----ccceEEEecCCCCCCCcchHHHh-----------hh--hhh
Q 024042 114 LLEKIGV---ERFSVVGTSYGGFVAYHMARMWPE-----RVEKVVIASSGVNMKRGDNEALV-----------KR--ANL 172 (273)
Q Consensus 114 ~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~-----~v~~~v~~~~~~~~~~~~~~~~~-----------~~--~~~ 172 (273)
+++.++. ++++++|||+||.+++.++...|+ .+.+++..+++.+..... ..+. .. ...
T Consensus 151 ~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl~~~~-~~~~~~~~~~~~~~~g~~~~~~ 229 (377)
T 4ezi_A 151 LANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGWEETM-HFVMLEPGPRATAYLAYFFYSL 229 (377)
T ss_dssp HHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCHHHHH-HHHHHSCCTTHHHHHHHHHHHH
T ss_pred HhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCHHHHH-HHHhcCCCcccchhHHHHHHHH
Confidence 4454443 789999999999999999987654 478888888876643211 0000 00 000
Q ss_pred -------hhhhhccCCCChHHHHHHhhh---------hh-ccCCCCChhh---------------HHh-------hhhcc
Q 024042 173 -------ERIDHLMLPESASQLRTLTGL---------AV-SKNLDIVPDF---------------FFN-------DFVHD 213 (273)
Q Consensus 173 -------~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~---------------~~~-------~~~~p 213 (273)
..+...+.+.....+...... .+ .......... .+. ....|
T Consensus 230 ~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~P 309 (377)
T 4ezi_A 230 QTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIFQPKFSNGIISKTDRNTEILKINFNHYDFKPTAP 309 (377)
T ss_dssp HHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGBCHHHHHHHHTTCSTTHHHHHHHHCCCCSCCSSC
T ss_pred HHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHhchhhhhhcccccchHHHHHHHHhcccCCCCCCC
Confidence 011111111111111111000 00 0000000000 011 12239
Q ss_pred EEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCC--CCCCcCcCChhhHHHHHHHHhcc
Q 024042 214 VLIVWGDQDQIFPLKMATELKELL---GKKARLEIIEN--TSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 214 ~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+++++|++|.++|.+.++.+.+.+ +. ++++.+++ .+|.... ......+.+||++
T Consensus 310 vli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v~~~~~~~~~~~H~~~~---~~~~~~~~~wl~~ 368 (377)
T 4ezi_A 310 LLLVGTKGDRDVPYAGAEMAYHSFRKYSD-FVWIKSVSDALDHVQAH---PFVLKEQVDFFKQ 368 (377)
T ss_dssp EEEEECTTCSSSCHHHHHHHHHHHHTTCS-CEEEEESCSSCCTTTTH---HHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhcCC-EEEEEcCCCCCCccChH---HHHHHHHHHHHHH
Confidence 999999999999999999998877 34 89999998 8887532 3445556666654
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-17 Score=127.44 Aligned_cols=213 Identities=14% Similarity=0.083 Sum_probs=127.0
Q ss_pred CCceeEEecC-CcceEEeecCCccCCCCCCCCCeEEEEcCC--CCchhHhHHHH---HHhhcCC-CeEEeecCCCC-CCC
Q 024042 24 GLSSQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGF--GPEAIWQWRKQ---VQFFAPH-FNVYVPDLIFF-GHS 95 (273)
Q Consensus 24 ~~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~--~~~~~~~~~~~---~~~l~~~-~~v~~~d~~g~-g~s 95 (273)
.++..++..+ .|.++.++..+ ..++.|+||++||. +++. ..|... .+.+.+. +.|+++|.++. +.+
T Consensus 8 ~v~~~~~~S~~~~~~i~v~~~p-----~~~~~p~vvllHG~~~~~~~-~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~ 81 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQFQS-----GGANSPALYLLDGLRAQDDF-SGWDINTPAFEWYDQSGLSVVMPVGGQSSFYS 81 (304)
T ss_dssp CCEEEEEEETTTTEEEEEEEEC-----CSTTBCEEEEECCTTCCSSS-CHHHHHCCHHHHHTTSSCEEEEECCCTTCTTC
T ss_pred eEEEEEEECccCCCceEEEECC-----CCCCCCEEEEeCCCCCCCCc-chhhcCCCHHHHHhcCCeEEEEECCCCCcccc
Confidence 3455556554 46677777322 12568999999998 5555 566653 3556555 99999998754 212
Q ss_pred CCCCc--------cccHHHH-HHHHHHHHHH-hCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch
Q 024042 96 TTRSI--------QRTELFQ-AASLGKLLEK-IGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN 163 (273)
Q Consensus 96 ~~~~~--------~~~~~~~-~~~~~~~~~~-~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~ 163 (273)
+.... .....+. ++++..++++ ++. ++++|+|+||||.+|+.++.++|+++++++++++.........
T Consensus 82 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~ 161 (304)
T 1sfr_A 82 DWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMG 161 (304)
T ss_dssp BCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTTH
T ss_pred ccCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccch
Confidence 11111 2334443 4677777776 555 4899999999999999999999999999999998775543211
Q ss_pred HHHhhhhhhhhhhhccCCCChHHHHHHhhh----hhccCCCCChhhHHhhh---hccEEEEecCCCC-------------
Q 024042 164 EALVKRANLERIDHLMLPESASQLRTLTGL----AVSKNLDIVPDFFFNDF---VHDVLIVWGDQDQ------------- 223 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~p~l~i~g~~D~------------- 223 (273)
........ ... .... ....+.. .+... .+.....++ ..|+++.+|+.|.
T Consensus 162 ~~~~~~~~-~~~----~~~~---~~~~~g~~~~~~~~~~---~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~ 230 (304)
T 1sfr_A 162 PTLIGLAM-GDA----GGYK---ASDMWGPKEDPAWQRN---DPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFL 230 (304)
T ss_dssp HHHHHHHH-HHT----TSCC---HHHHHCSTTSTHHHHS---CTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHH
T ss_pred hhhhhHhh-hhc----cccc---hHHhcCCcchhhhHhc---CHHHHHHHhhhcCCeEEEEecCCCCccccccccccchh
Confidence 11100000 000 0000 0000000 00000 111111222 3599999999998
Q ss_pred -CCChHHHHHHHHHh---c-CCcEEEEeCCCCCCc
Q 024042 224 -IFPLKMATELKELL---G-KKARLEIIENTSHVP 253 (273)
Q Consensus 224 -~~~~~~~~~~~~~~---~-~~~~~~~~~~~gH~~ 253 (273)
.++.+..+.+.+.+ + .++++.++++++|..
T Consensus 231 e~~~~~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~ 265 (304)
T 1sfr_A 231 EGFVRTSNIKFQDAYNAGGGHNGVFDFPDSGTHSW 265 (304)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSH
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEecCCCccCH
Confidence 55677777777766 4 567888887789974
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-18 Score=116.41 Aligned_cols=100 Identities=16% Similarity=0.186 Sum_probs=83.8
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHH
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELF 106 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~ 106 (273)
...++. +|.+++|...+ ++|+||++| ++. ..|..+ |+++|+|+++|+||+|.|...... .++
T Consensus 4 ~~~~~~-~g~~~~~~~~g--------~~~~vv~~H---~~~-~~~~~~---l~~~~~v~~~d~~G~G~s~~~~~~--~~~ 65 (131)
T 2dst_A 4 AGYLHL-YGLNLVFDRVG--------KGPPVLLVA---EEA-SRWPEA---LPEGYAFYLLDLPGYGRTEGPRMA--PEE 65 (131)
T ss_dssp EEEEEE-TTEEEEEEEEC--------CSSEEEEES---SSG-GGCCSC---CCTTSEEEEECCTTSTTCCCCCCC--HHH
T ss_pred eEEEEE-CCEEEEEEEcC--------CCCeEEEEc---CCH-HHHHHH---HhCCcEEEEECCCCCCCCCCCCCC--HHH
Confidence 445555 88999998875 357899999 444 556655 766799999999999999876554 888
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCc
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE 144 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~ 144 (273)
.++++.++++.++.++++++|||+||.+|+.++.++|.
T Consensus 66 ~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 66 LAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 99999999999998999999999999999999999884
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3e-17 Score=123.93 Aligned_cols=209 Identities=14% Similarity=0.100 Sum_probs=124.0
Q ss_pred ceeEEecC-CcceEEeecCCccCCCCCCCCCeEEEEcCCC--CchhHhHHHH---HHhhcCC-CeEEeecCCCC-CCCCC
Q 024042 26 SSQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFG--PEAIWQWRKQ---VQFFAPH-FNVYVPDLIFF-GHSTT 97 (273)
Q Consensus 26 ~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~--~~~~~~~~~~---~~~l~~~-~~v~~~d~~g~-g~s~~ 97 (273)
+..++..+ .|.++.++..+ . . .++||++||++ .+. ..|... .+.+.+. +.|+++|.+|. +.+..
T Consensus 7 ~~~~~~s~~~~~~~~v~~~p----~-~--~~~v~llHG~~~~~~~-~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~ 78 (280)
T 1dqz_A 7 EYLQVPSASMGRDIKVQFQG----G-G--PHAVYLLDGLRAQDDY-NGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDW 78 (280)
T ss_dssp EEEEEEETTTTEEEEEEEEC----C-S--SSEEEECCCTTCCSSS-CHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBC
T ss_pred EEEEEECcccCceeEEEEcC----C-C--CCEEEEECCCCCCCCc-ccccccCcHHHHHhcCCeEEEEECCCCCccccCC
Confidence 33444433 46677777543 1 1 35999999995 355 667654 3456655 99999998753 22211
Q ss_pred --CC------ccccHHH-HHHHHHHHHHH-hCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHH
Q 024042 98 --RS------IQRTELF-QAASLGKLLEK-IGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA 165 (273)
Q Consensus 98 --~~------~~~~~~~-~~~~~~~~~~~-~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~ 165 (273)
+. ......+ .++++..++++ ++. ++++|+||||||.+|+.++.++|+++++++++++...........
T Consensus 79 ~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~ 158 (280)
T 1dqz_A 79 YQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESWWPT 158 (280)
T ss_dssp SSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTTHHH
T ss_pred CCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcchhh
Confidence 11 1234444 35788888887 665 489999999999999999999999999999999887654321111
Q ss_pred Hhhhhhhhh----hhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhh---hccEEEEecCCCC--------------C
Q 024042 166 LVKRANLER----IDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDF---VHDVLIVWGDQDQ--------------I 224 (273)
Q Consensus 166 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~l~i~g~~D~--------------~ 224 (273)
......... ....+....... +... .+.....++ ..|+++.+|+.|. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~g~~~~~~--------~~~~---~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~ 227 (280)
T 1dqz_A 159 LIGLAMNDSGGYNANSMWGPSSDPA--------WKRN---DPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEG 227 (280)
T ss_dssp HHHHHHHHTTSCCHHHHHCSTTSHH--------HHHT---CTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHH
T ss_pred hHHHHhhhccCcCHHHhcCCCCchh--------hhhc---CHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHH
Confidence 111000000 000000000000 0000 111111122 3599999999997 4
Q ss_pred CChHHHHHHHHHh---c-CCcEEEEeCCCCCCc
Q 024042 225 FPLKMATELKELL---G-KKARLEIIENTSHVP 253 (273)
Q Consensus 225 ~~~~~~~~~~~~~---~-~~~~~~~~~~~gH~~ 253 (273)
++.+..+.+.+.+ + .++++.++++++|..
T Consensus 228 ~~~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~ 260 (280)
T 1dqz_A 228 LTLRTNQTFRDTYAADGGRNGVFNFPPNGTHSW 260 (280)
T ss_dssp HHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSH
T ss_pred HHHHHHHHHHHHHHhCCCCceEEEecCCCccCh
Confidence 5667777777766 3 456777778889974
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-16 Score=120.14 Aligned_cols=215 Identities=12% Similarity=0.099 Sum_probs=125.7
Q ss_pred CCceeEEecC-CcceEEeecCCccCCCCCCCCCeEEEEcCCC--CchhHhHHH---HHHhhcCC-CeEEeecCCCCC-CC
Q 024042 24 GLSSQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFG--PEAIWQWRK---QVQFFAPH-FNVYVPDLIFFG-HS 95 (273)
Q Consensus 24 ~~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~--~~~~~~~~~---~~~~l~~~-~~v~~~d~~g~g-~s 95 (273)
.++..++..+ .|.++.++ +.| . + .|+||++||++ ++. ..|.. +.+.+.+. +.|+.+|.++.+ .+
T Consensus 10 ~~~~~~~~S~~~~~~~~~~-~~P---~-~--~p~vvllHG~~~~~~~-~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~ 81 (280)
T 1r88_A 10 PYENLMVPSPSMGRDIPVA-FLA---G-G--PHAVYLLDAFNAGPDV-SNWVTAGNAMNTLAGKGISVVAPAGGAYSMYT 81 (280)
T ss_dssp CCEEEEEEETTTTEEEEEE-EEC---C-S--SSEEEEECCSSCCSSS-CHHHHTSCHHHHHTTSSSEEEEECCCTTSTTS
T ss_pred CEEEEEEECcccCCcceEE-EeC---C-C--CCEEEEECCCCCCCCh-hhhhhcccHHHHHhcCCeEEEEECCCCCCccC
Confidence 3455555554 57777777 431 1 1 47999999995 344 56654 44556665 999999987542 11
Q ss_pred CCCCc-cccH-HHHHHHHHHHHHH-hCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhh
Q 024042 96 TTRSI-QRTE-LFQAASLGKLLEK-IGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA 170 (273)
Q Consensus 96 ~~~~~-~~~~-~~~~~~~~~~~~~-~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~ 170 (273)
..... .... ...++++..+++. ++. ++++|+|+||||.+|+.++.++|+++++++++++................
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~~ 161 (280)
T 1r88_A 82 NWEQDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAG 161 (280)
T ss_dssp BCSSCTTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccchhhHHHH
Confidence 11111 1122 3456778888877 555 48999999999999999999999999999999987764321110000000
Q ss_pred hhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhh---hccEEEEe----cCCCCC-------CChHHHHHHHHH
Q 024042 171 NLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDF---VHDVLIVW----GDQDQI-------FPLKMATELKEL 236 (273)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~l~i~----g~~D~~-------~~~~~~~~~~~~ 236 (273)
...... . .....+.......+. ...+.....++ ..|+++.+ |+.|.. ++.+..+.+.+.
T Consensus 162 -~~~~~~-~--~~~~~~g~~~~~~~~---~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~~~~~ 234 (280)
T 1r88_A 162 -MQQFGG-V--DTNGMWGAPQLGRWK---WHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQ 234 (280)
T ss_dssp -HHHHHC-C--CTHHHHCCGGGSTTG---GGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHHH
T ss_pred -hhhccc-c--chhhhcCCCchhhhH---hcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHHHHHH
Confidence 000000 0 000000000000000 01111122222 35899999 999983 477788888777
Q ss_pred h---c-CCcEEEEeCCCCCCc
Q 024042 237 L---G-KKARLEIIENTSHVP 253 (273)
Q Consensus 237 ~---~-~~~~~~~~~~~gH~~ 253 (273)
+ + .+.++.++++++|..
T Consensus 235 L~~~g~~~~~~~~~~~g~H~~ 255 (280)
T 1r88_A 235 YRSVGGHNGHFDFPASGDNGW 255 (280)
T ss_dssp HHHTTCCSEEEECCSSCCSSH
T ss_pred HHHCCCcceEEEecCCCCcCh
Confidence 6 3 446777777889964
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-17 Score=138.06 Aligned_cols=129 Identities=12% Similarity=0.057 Sum_probs=89.1
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch------hHhHHH-HH---HhhcCC-CeEEeecCCCCCCC
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA------IWQWRK-QV---QFFAPH-FNVYVPDLIFFGHS 95 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~------~~~~~~-~~---~~l~~~-~~v~~~d~~g~g~s 95 (273)
...++..||.+|+++.+.|+. .++.|+||++||++... ...|.. +. +.|+++ |.|+.+|+||+|.|
T Consensus 27 ~v~i~~~DG~~L~~~~~~P~~---~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S 103 (615)
T 1mpx_A 27 EVMIPMRDGVKLHTVIVLPKG---AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGS 103 (615)
T ss_dssp EEEEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTC
T ss_pred EEEEECCCCCEEEEEEEeCCC---CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCC
Confidence 345666799999988775321 24568899999987642 012322 22 555555 99999999999998
Q ss_pred CCCCcccc-----HH----HHHHHHHHHHHHh----CC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 96 TTRSIQRT-----EL----FQAASLGKLLEKI----GV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 96 ~~~~~~~~-----~~----~~~~~~~~~~~~~----~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
........ .. ...+|+.++++.+ .. .++.++|||+||.+++.++...+++++++|.+++..+.
T Consensus 104 ~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d~ 181 (615)
T 1mpx_A 104 EGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDG 181 (615)
T ss_dssp CSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCCT
T ss_pred CCccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCcccc
Confidence 86533220 00 2344444444433 22 48999999999999999998888999999999998874
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.6e-19 Score=138.65 Aligned_cols=124 Identities=12% Similarity=-0.017 Sum_probs=86.8
Q ss_pred EecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH--------------H----HHHHhhcCC-CeEEeecCC
Q 024042 30 IDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW--------------R----KQVQFFAPH-FNVYVPDLI 90 (273)
Q Consensus 30 ~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~--------------~----~~~~~l~~~-~~v~~~d~~ 90 (273)
+...+|.++..+.+.|+.. .++.|+||++||++++. ... + .++..|++. |.|+++|+|
T Consensus 92 ~~~~~g~~l~~~l~~P~~~--~~~~P~Vl~~HG~g~~~-~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~r 168 (391)
T 3g8y_A 92 FYPFPKSVSTFLVLKPEHL--KGAVPGVLCIPGSGRTK-EGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNA 168 (391)
T ss_dssp ECCSTTCCEEEEEEEETTC--CSCEEEEEEECCTTCCH-HHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCT
T ss_pred EEcCCCCEEEEEEEeCCCC--CCCCCEEEEeCCCCCCc-hhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCC
Confidence 3344788888777653211 35678999999998876 321 2 566777776 999999999
Q ss_pred CCCCCCCCCcc-----ccHHHH---------------HHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCc
Q 024042 91 FFGHSTTRSIQ-----RTELFQ---------------AASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPE 144 (273)
Q Consensus 91 g~g~s~~~~~~-----~~~~~~---------------~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~ 144 (273)
|+|.+...... ...... +.|+...++.+ +.++|.++||||||.+|+.++... +
T Consensus 169 g~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~-~ 247 (391)
T 3g8y_A 169 AAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLD-K 247 (391)
T ss_dssp TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHC-T
T ss_pred CccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcC-C
Confidence 99998765321 222222 24555555554 236899999999999999988875 5
Q ss_pred ccceEEEecCCCC
Q 024042 145 RVEKVVIASSGVN 157 (273)
Q Consensus 145 ~v~~~v~~~~~~~ 157 (273)
+++++|+.++...
T Consensus 248 ~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 248 DIYAFVYNDFLCQ 260 (391)
T ss_dssp TCCEEEEESCBCC
T ss_pred ceeEEEEccCCCC
Confidence 7999998876544
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.9e-19 Score=139.93 Aligned_cols=107 Identities=17% Similarity=0.178 Sum_probs=87.3
Q ss_pred CCCCCeEEEEcCCCCchhHhHHH-HHHhhcC--CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh----C--Cc
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRK-QVQFFAP--HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI----G--VE 121 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~-~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~--~~ 121 (273)
+.++|+||++||++++....|.. +.+.|.+ +|+|+++|++|+|.|..+....+.+..++++.++++.+ + .+
T Consensus 67 ~~~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~~~~~~~~~~dl~~~i~~L~~~~g~~~~ 146 (452)
T 1w52_X 67 QSSRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQAVQNIRIVGAETAYLIQQLLTELSYNPE 146 (452)
T ss_dssp CTTSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHHHHHhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 35678999999998876345766 6676654 59999999999999874333345666778888888777 5 68
Q ss_pred cEEEEEeccchHHHHHHHHhCCcccceEEEecCCCC
Q 024042 122 RFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 122 ~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
+++|+|||+||++|..++.++|++++++++++|...
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1w52_X 147 NVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEP 182 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred cEEEEEeCHHHHHHHHHHHhcccceeeEEecccccc
Confidence 999999999999999999999999999999988654
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-17 Score=130.22 Aligned_cols=124 Identities=13% Similarity=0.007 Sum_probs=85.9
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHH------------------HHHHhhcCC-CeEEeecC
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWR------------------KQVQFFAPH-FNVYVPDL 89 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~------------------~~~~~l~~~-~~v~~~d~ 89 (273)
.+...+|.++..+.+.|+.. .++.|+||++||.+++. .... .++..|++. |.|+++|+
T Consensus 96 ~~~~~~g~~l~~~l~~P~~~--~~~~P~Vv~~HG~g~~~-~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~ 172 (398)
T 3nuz_A 96 EFYPLPKCVSTFLVLIPDNI--NKPVPAILCIPGSGGNK-EGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDN 172 (398)
T ss_dssp EECCSTTBCEEEEEEEESSC--CSCEEEEEEECCTTCCH-HHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECC
T ss_pred EEEcCCCcEEEEEEEeCCCC--CCCccEEEEEcCCCCCc-ccccccccccccccccccchHHHHHHHHHHCCCEEEEecC
Confidence 44455788888777653221 35678999999998876 4221 466777776 99999999
Q ss_pred CCCCCCCCCCcc--------------------ccHHHHHHHHHHHHHHhC------CccEEEEEeccchHHHHHHHHhCC
Q 024042 90 IFFGHSTTRSIQ--------------------RTELFQAASLGKLLEKIG------VERFSVVGTSYGGFVAYHMARMWP 143 (273)
Q Consensus 90 ~g~g~s~~~~~~--------------------~~~~~~~~~~~~~~~~~~------~~~i~l~G~S~Gg~~a~~~a~~~~ 143 (273)
||+|.+...... ......+.|+...++.+. .++|.++|||+||.+|+.++...
T Consensus 173 rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~- 251 (398)
T 3nuz_A 173 PAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLD- 251 (398)
T ss_dssp TTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHC-
T ss_pred CCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcC-
Confidence 999998744310 011122345556666552 36899999999999999888875
Q ss_pred cccceEEEecCCC
Q 024042 144 ERVEKVVIASSGV 156 (273)
Q Consensus 144 ~~v~~~v~~~~~~ 156 (273)
++++++|.+++..
T Consensus 252 ~~i~a~v~~~~~~ 264 (398)
T 3nuz_A 252 TSIYAFVYNDFLC 264 (398)
T ss_dssp TTCCEEEEESCBC
T ss_pred CcEEEEEEecccc
Confidence 4699988876543
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=7.8e-19 Score=139.97 Aligned_cols=107 Identities=16% Similarity=0.187 Sum_probs=87.4
Q ss_pred CCCCCeEEEEcCCCCchhHhHHH-HHHhhcC--CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh----CC--c
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRK-QVQFFAP--HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI----GV--E 121 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~-~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~~--~ 121 (273)
+.++|+||++||++++....|.. +.+.|.+ +|+|+++|++|+|.|.......+....++++.++++.+ +. +
T Consensus 67 ~~~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~li~~L~~~~g~~~~ 146 (452)
T 1bu8_A 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPE 146 (452)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhHhHhhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 35678999999998876346776 6666654 59999999999999874333345667788888888877 53 8
Q ss_pred cEEEEEeccchHHHHHHHHhCCcccceEEEecCCCC
Q 024042 122 RFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 122 ~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
+++|+||||||++|..++.++|++++++++++|...
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1bu8_A 147 NVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred ceEEEEEChhHHHHHHHHHhcccccceEEEecCCcc
Confidence 999999999999999999999999999999988654
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-18 Score=137.87 Aligned_cols=108 Identities=15% Similarity=0.147 Sum_probs=85.4
Q ss_pred CCCCCeEEEEcCCCCchhHhHHH-HHHhh--cCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh------CCc
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRK-QVQFF--APHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI------GVE 121 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~-~~~~l--~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~------~~~ 121 (273)
+.++|+||++||++++....|.. +.+.| .++|+|+++|++|+|.|..+....+....++++.++++.+ +.+
T Consensus 66 ~~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~v~~~la~ll~~L~~~~g~~~~ 145 (449)
T 1hpl_A 66 NTGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQASQNVRIVGAEVAYLVGVLQSSFDYSPS 145 (449)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 35678999999999885356776 66666 3469999999999998863333345556667777777665 458
Q ss_pred cEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 122 RFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 122 ~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
+++|+||||||++|..++.++|++++++++++|....
T Consensus 146 ~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p~ 182 (449)
T 1hpl_A 146 NVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEPC 182 (449)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred cEEEEEECHhHHHHHHHHHhcchhcceeeccCccccc
Confidence 9999999999999999999999999999999886543
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.74 E-value=8.8e-17 Score=134.16 Aligned_cols=131 Identities=12% Similarity=0.020 Sum_probs=89.5
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchh-------HhHHHH---H-HhhcCC-CeEEeecCCCCC
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI-------WQWRKQ---V-QFFAPH-FNVYVPDLIFFG 93 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~-------~~~~~~---~-~~l~~~-~~v~~~d~~g~g 93 (273)
+...++..||.+|+.+.+.|+. .++.|+||++||++.... ..|... . +.|.++ |.|+.+|+||+|
T Consensus 38 ~~v~i~~~DG~~L~~~l~~P~~---~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g 114 (652)
T 2b9v_A 38 REVMVPMRDGVKLYTVIVIPKN---ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKY 114 (652)
T ss_dssp EEEEEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTST
T ss_pred EEEEEECCCCcEEEEEEEecCC---CCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCC
Confidence 3456667799999987775321 245688999998775420 012111 1 455554 999999999999
Q ss_pred CCCCCCcccc-----HH----HHHHHHHHHHHHh----CC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 94 HSTTRSIQRT-----EL----FQAASLGKLLEKI----GV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 94 ~s~~~~~~~~-----~~----~~~~~~~~~~~~~----~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
.|........ .. ...+|+.++++.+ .. .+|.++|+|+||.+++.++...+++++++|.+++..+.
T Consensus 115 ~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~ 194 (652)
T 2b9v_A 115 GSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 194 (652)
T ss_dssp TCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred CCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccc
Confidence 9986543221 00 2344444444433 22 48999999999999999998888999999999988775
Q ss_pred C
Q 024042 159 K 159 (273)
Q Consensus 159 ~ 159 (273)
.
T Consensus 195 ~ 195 (652)
T 2b9v_A 195 W 195 (652)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-17 Score=127.04 Aligned_cols=105 Identities=20% Similarity=0.270 Sum_probs=91.0
Q ss_pred CCCCCeEEEEcCCCCchh-----HhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEE
Q 024042 51 TLKKPSLVLIHGFGPEAI-----WQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFS 124 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~-----~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 124 (273)
.+++++|||+||++++.. ..|..+.+.|.+. |.|+++|+||+|.+..+ ....++.++++.++++.++.++++
T Consensus 5 ~~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~--~~~~~~l~~~i~~~l~~~~~~~v~ 82 (320)
T 1ys1_X 5 AATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGP--NGRGEQLLAYVKTVLAATGATKVN 82 (320)
T ss_dssp TCCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSST--TSHHHHHHHHHHHHHHHHCCSCEE
T ss_pred CCCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCEE
Confidence 456789999999887652 4578888888877 99999999999998653 356788899999999999989999
Q ss_pred EEEeccchHHHHHHHHhCCcccceEEEecCCCC
Q 024042 125 VVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 125 l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
++|||+||.++..++.++|++|+++|+++++..
T Consensus 83 lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~~ 115 (320)
T 1ys1_X 83 LVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHR 115 (320)
T ss_dssp EEEETHHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred EEEECHhHHHHHHHHHhChhhceEEEEECCCCC
Confidence 999999999999999999999999999998543
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.72 E-value=6.3e-18 Score=129.47 Aligned_cols=108 Identities=16% Similarity=0.228 Sum_probs=88.4
Q ss_pred CCCCCeEEEEcCCCCch---------hHhH----HHHHHhhcCC-Ce---EEeecCCCCCCCCCCC----ccccHHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEA---------IWQW----RKQVQFFAPH-FN---VYVPDLIFFGHSTTRS----IQRTELFQAA 109 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~---------~~~~----~~~~~~l~~~-~~---v~~~d~~g~g~s~~~~----~~~~~~~~~~ 109 (273)
...+++|||+||++++. ...| ..+++.|.+. |. |+++|++|+|.|..+. .....++..+
T Consensus 37 ~~~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~ 116 (342)
T 2x5x_A 37 TATKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKT 116 (342)
T ss_dssp CCCSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHH
T ss_pred CCCCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHH
Confidence 44567899999999842 1578 7888888775 87 9999999999876442 2345667777
Q ss_pred HHHHHHHHhCCccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCCC
Q 024042 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVNM 158 (273)
Q Consensus 110 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~~ 158 (273)
++.++++..+.++++|+||||||.++..++.++ |++|+++|+++++...
T Consensus 117 ~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~G 167 (342)
T 2x5x_A 117 FIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIRG 167 (342)
T ss_dssp HHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTTC
T ss_pred HHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCccc
Confidence 888888888889999999999999999999998 8999999999987543
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-17 Score=125.43 Aligned_cols=102 Identities=18% Similarity=0.201 Sum_probs=88.5
Q ss_pred CCCCCeEEEEcCCCCch----hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEE
Q 024042 51 TLKKPSLVLIHGFGPEA----IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSV 125 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~----~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l 125 (273)
.+.+|+|||+||++++. ...|..+.+.|.+. |+|+++|+||+|.+. .+.++.++++.++++.++.+++++
T Consensus 4 ~~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~-----~~~~~~~~~i~~~~~~~~~~~v~l 78 (285)
T 1ex9_A 4 TQTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-----VRGEQLLQQVEEIVALSGQPKVNL 78 (285)
T ss_dssp TCCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-----HHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred CCCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCch-----hhHHHHHHHHHHHHHHhCCCCEEE
Confidence 34678999999988764 13788888888777 999999999999764 467788899999999998899999
Q ss_pred EEeccchHHHHHHHHhCCcccceEEEecCCCC
Q 024042 126 VGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 126 ~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
+|||+||.++..++.++|++|+++|+++++..
T Consensus 79 vGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~~ 110 (285)
T 1ex9_A 79 IGHSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp EEETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred EEECHhHHHHHHHHHhChhheeEEEEECCCCC
Confidence 99999999999999999999999999998543
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1e-17 Score=132.96 Aligned_cols=107 Identities=15% Similarity=0.162 Sum_probs=84.9
Q ss_pred CCCCCeEEEEcCCCCchhHhHHH-HHHhh-cC-CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh------CCc
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRK-QVQFF-AP-HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI------GVE 121 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~-~~~~l-~~-~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~------~~~ 121 (273)
+.++|+||++||++++....|.. +.+.+ .. +|+|+++|++|+|.+..+....+.+..++++.++++.+ +.+
T Consensus 67 ~~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~~a~~l~~ll~~L~~~~g~~~~ 146 (450)
T 1rp1_A 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPS 146 (450)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 34678999999999886236766 55554 43 49999999999988753333346666778888888776 368
Q ss_pred cEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 122 RFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 122 ~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
+++|+||||||++|..++.++|+ +.++++++|....
T Consensus 147 ~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p~ 182 (450)
T 1rp1_A 147 QVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEAS 182 (450)
T ss_dssp GEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCTT
T ss_pred hEEEEEECHhHHHHHHHHHhcCC-cccccccCccccc
Confidence 99999999999999999999999 9999999986643
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3.2e-16 Score=129.43 Aligned_cols=127 Identities=13% Similarity=0.032 Sum_probs=93.0
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH---HH-HhhcCC-CeEEeecCCCCCCCCCCCcc
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK---QV-QFFAPH-FNVYVPDLIFFGHSTTRSIQ 101 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~---~~-~~l~~~-~~v~~~d~~g~g~s~~~~~~ 101 (273)
...++..||.+|++..+.|+ ..++.|+||++||++... ..+.. .. ..|.++ |.|+.+|+||+|.|......
T Consensus 11 ~v~i~~~DG~~L~~~~~~P~---~~~~~P~vv~~~~~g~~~-~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~ 86 (587)
T 3i2k_A 11 NVMVPMRDGVRLAVDLYRPD---ADGPVPVLLVRNPYDKFD-VFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP 86 (587)
T ss_dssp EEEEECTTSCEEEEEEEEEC---CSSCEEEEEEEESSCTTC-HHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCT
T ss_pred EEEEECCCCCEEEEEEEECC---CCCCeeEEEEECCcCCCc-cccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCcccc
Confidence 34677789999998777532 234568999999988765 32222 22 455555 99999999999999865443
Q ss_pred ccHHHHHHHHHHHHHHhC-----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCC-CCCC
Q 024042 102 RTELFQAASLGKLLEKIG-----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG-VNMK 159 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~-~~~~ 159 (273)
. ....+|+.++++.+. ..++.++|+|+||.+++.++...++.++++|.+++. .+..
T Consensus 87 ~--~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~ 148 (587)
T 3i2k_A 87 H--VDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYR 148 (587)
T ss_dssp T--TTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCC
T ss_pred c--cchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccccc
Confidence 2 234555555555542 268999999999999999999989999999999987 5543
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-16 Score=129.64 Aligned_cols=128 Identities=16% Similarity=0.132 Sum_probs=93.4
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHH----------------------HHHHhhcCC-Ce
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWR----------------------KQVQFFAPH-FN 83 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~----------------------~~~~~l~~~-~~ 83 (273)
...|+..||.+|+...+.|+ ..++.|+||+.||++......+. .....|+++ |.
T Consensus 43 ~v~i~~~DG~~L~a~l~~P~---~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~ 119 (560)
T 3iii_A 43 DGTVEMRDGEKLYINIFRPN---KDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYV 119 (560)
T ss_dssp EEEEECTTSCEEEEEEEECS---SSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCE
T ss_pred EEEEECCCCcEEEEEEEecC---CCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCE
Confidence 34566679999998887642 23567899999998876310110 124566665 99
Q ss_pred EEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC---C--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 84 VYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG---V--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 84 v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
|+.+|+||+|.|.+...... ....+|+.++++.+. . .+|.++|+|+||.+++.+|...|+.++++|..++..+.
T Consensus 120 vv~~D~RG~G~S~G~~~~~~-~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~d~ 198 (560)
T 3iii_A 120 VVKVALRGSDKSKGVLSPWS-KREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLNDM 198 (560)
T ss_dssp EEEEECTTSTTCCSCBCTTS-HHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCCBH
T ss_pred EEEEcCCCCCCCCCccccCC-hhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCcccc
Confidence 99999999999987654322 244566666665542 1 58999999999999999999999899999999987664
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.1e-14 Score=109.00 Aligned_cols=191 Identities=12% Similarity=-0.024 Sum_probs=114.1
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH-------HHHHHhhcC-----CCeEEeecCCCCC
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW-------RKQVQFFAP-----HFNVYVPDLIFFG 93 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-------~~~~~~l~~-----~~~v~~~d~~g~g 93 (273)
+..++...+| .+.++.+.|+....+++.|+|+++||.+++. ..| ..+++.|.+ .+.|+++|.+|-
T Consensus 42 ~~~~~~s~~~-~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~-~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~- 118 (297)
T 1gkl_A 42 VKETYTGING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENE-NTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG- 118 (297)
T ss_dssp EEEEEEETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCT-TSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST-
T ss_pred EEEEEEcCCC-EEEEEEEeCCCCCCCCCCCEEEEECCCCCCc-chhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC-
Confidence 3344555455 6677666544322235678899999987654 332 344554432 388999998752
Q ss_pred CCCCCCccccHHHHHHHHHHHHHHh-C--------------CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 94 HSTTRSIQRTELFQAASLGKLLEKI-G--------------VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 94 ~s~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
+... .. -....++++...++.. . ..++.++|+||||.+|+.++.++|+++++++.+++....
T Consensus 119 -~~~~-~~-~~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~~~ 195 (297)
T 1gkl_A 119 -NCTA-QN-FYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWY 195 (297)
T ss_dssp -TCCT-TT-HHHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCCB
T ss_pred -ccch-HH-HHHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccccc
Confidence 2211 11 1234456677777654 2 246999999999999999999999999999999987543
Q ss_pred CCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh-
Q 024042 159 KRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL- 237 (273)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~- 237 (273)
...... ....+....... . +.....++++.+|++|.. ....+.+.+.+
T Consensus 196 ~~~~~~------------------~~~~~~~~~~~~---~--------~~~~~~~l~~~~G~~D~~--~~~~~~l~~~L~ 244 (297)
T 1gkl_A 196 GNSPQD------------------KANSIAEAINRS---G--------LSKREYFVFAATGSEDIA--YANMNPQIEAMK 244 (297)
T ss_dssp SSSHHH------------------HHHHHHHHHHHH---T--------CCTTSCEEEEEEETTCTT--HHHHHHHHHHHH
T ss_pred CCccch------------------hhhHHHHHHhhc---c--------CCcCcEEEEEEeCCCccc--chhHHHHHHHHH
Confidence 221000 000011100000 0 000111466668999976 34556666665
Q ss_pred --c----------CCcEEEEeCCCCCCc
Q 024042 238 --G----------KKARLEIIENTSHVP 253 (273)
Q Consensus 238 --~----------~~~~~~~~~~~gH~~ 253 (273)
+ .+.++.+++++||..
T Consensus 245 ~~g~~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 245 ALPHFDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp TSTTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred HcCCccccccccCCceEEEECCCCCcCH
Confidence 2 267899999989963
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.9e-15 Score=113.70 Aligned_cols=97 Identities=14% Similarity=0.147 Sum_probs=79.5
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC-ccEEEEEec
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV-ERFSVVGTS 129 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S 129 (273)
.+++++++++||++++. ..|..+...|. +.|+.+|+|+ . ....++++.++++.+.++.+.. ++++++|||
T Consensus 43 ~~~~~~l~~~hg~~g~~-~~~~~~~~~l~--~~v~~~~~~~--~----~~~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S 113 (316)
T 2px6_A 43 QSSERPLFLVHPIEGST-TVFHSLASRLS--IPTYGLQCTR--A----APLDSIHSLAAYYIDCIRQVQPEGPYRVAGYS 113 (316)
T ss_dssp CCSSCCEEEECCTTCCS-GGGHHHHHHCS--SCEEEECCCT--T----SCTTCHHHHHHHHHHHHTTTCSSCCCEEEEET
T ss_pred CCCCCeEEEECCCCCCH-HHHHHHHHhcC--CCEEEEECCC--C----CCcCCHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 34678999999999998 89999999886 9999999983 1 2345888889999888887764 789999999
Q ss_pred cchHHHHHHHHhCC---cc---cceEEEecCCC
Q 024042 130 YGGFVAYHMARMWP---ER---VEKVVIASSGV 156 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~---~~---v~~~v~~~~~~ 156 (273)
|||.+|..+|.+.+ ++ +++++++++..
T Consensus 114 ~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 114 YGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp HHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred HHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 99999999998763 45 88999988753
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-15 Score=120.52 Aligned_cols=106 Identities=19% Similarity=0.240 Sum_probs=79.3
Q ss_pred CCCeEEEEcCCCCchhHhHH--HHHHhhcCC--CeEEeecCCCCCCCCCCCc----------cccHHHHHHHHHHHHHHh
Q 024042 53 KKPSLVLIHGFGPEAIWQWR--KQVQFFAPH--FNVYVPDLIFFGHSTTRSI----------QRTELFQAASLGKLLEKI 118 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~--~~~~~l~~~--~~v~~~d~~g~g~s~~~~~----------~~~~~~~~~~~~~~~~~~ 118 (273)
++.+||++||..++....+. .....+++. +.|+++|+||||.|.+... ..+.++.++|+..+++.+
T Consensus 37 ~g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l 116 (446)
T 3n2z_B 37 NGGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHL 116 (446)
T ss_dssp TTCEEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHH
Confidence 34568888998776522121 122333332 6999999999999975321 125788899999998887
Q ss_pred CC-------ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 119 GV-------ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 119 ~~-------~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
.. .+++++||||||.+|+.++.++|+.+.++|+.+++...
T Consensus 117 ~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv~~ 163 (446)
T 3n2z_B 117 KRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQ 163 (446)
T ss_dssp HHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTTC
T ss_pred HHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccchhc
Confidence 43 38999999999999999999999999999998866543
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.5e-14 Score=108.79 Aligned_cols=212 Identities=14% Similarity=0.129 Sum_probs=123.9
Q ss_pred CCceeEEecC-CcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHHHhhc--CC---CeEEeecCCCCC---
Q 024042 24 GLSSQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQFFA--PH---FNVYVPDLIFFG--- 93 (273)
Q Consensus 24 ~~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~~~l~--~~---~~v~~~d~~g~g--- 93 (273)
..+..++..+ .|..+.++.+.|+.....++.|+|+++||.+... ...+..+...+. .+ +.|+.+|+++.+
T Consensus 17 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~ 96 (275)
T 2qm0_A 17 NTEQWKMYSKLEGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFS 96 (275)
T ss_dssp TEEEEEEECTTTCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCC
T ss_pred CceEEEEEecCCCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCc
Confidence 3445556554 5778888877655433345668999999965321 122333333331 12 899999998621
Q ss_pred -------CCCCC--------------Cccc---cHHH-HHHHHHHHHHH-hC--CccEEEEEeccchHHHHHHHHhCCcc
Q 024042 94 -------HSTTR--------------SIQR---TELF-QAASLGKLLEK-IG--VERFSVVGTSYGGFVAYHMARMWPER 145 (273)
Q Consensus 94 -------~s~~~--------------~~~~---~~~~-~~~~~~~~~~~-~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~ 145 (273)
.+... .... ...+ ..+++...++. +. .++++++|||+||.+|+.++.++|+.
T Consensus 97 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~ 176 (275)
T 2qm0_A 97 GEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNA 176 (275)
T ss_dssp HHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGG
T ss_pred ccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchh
Confidence 01000 0001 1112 22444445544 23 36899999999999999999999999
Q ss_pred cceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCC
Q 024042 146 VEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIF 225 (273)
Q Consensus 146 v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~ 225 (273)
+++++.++|...... . .+.. ......... . ......|+++++|+.|..+
T Consensus 177 f~~~~~~s~~~~~~~--------~----~~~~----~~~~~~~~~-~--------------~~~~~~~~~l~~G~~D~~~ 225 (275)
T 2qm0_A 177 FQNYFISSPSIWWNN--------K----SVLE----KEENLIIEL-N--------------NAKFETGVFLTVGSLEREH 225 (275)
T ss_dssp CSEEEEESCCTTHHH--------H----GGGG----GTTHHHHHH-H--------------TCSSCEEEEEEEETTSCHH
T ss_pred hceeEEeCceeeeCh--------H----HHHH----HHHHHHhhh-c--------------ccCCCceEEEEeCCcccch
Confidence 999999988642110 0 0000 000000000 0 0112238999999999888
Q ss_pred ChHHHHHHHHHh---c---CCcEEEEeCCCCCCcCcCChhhHHHHHHHHh
Q 024042 226 PLKMATELKELL---G---KKARLEIIENTSHVPQIENPGLFNSIVKNFL 269 (273)
Q Consensus 226 ~~~~~~~~~~~~---~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 269 (273)
+.+.++.+.+.+ . .+.++.++++++|+... +..+.+.+ +||
T Consensus 226 ~~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~~--~~~l~~~l-~~l 272 (275)
T 2qm0_A 226 MVVGANELSERLLQVNHDKLKFKFYEAEGENHASVV--PTSLSKGL-RFI 272 (275)
T ss_dssp HHHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTHH--HHHHHHHH-HHH
T ss_pred hhHHHHHHHHHHHhcccCCceEEEEECCCCCccccH--HHHHHHHH-HHH
Confidence 888888888777 2 24678899999997432 33344433 554
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.9e-14 Score=112.94 Aligned_cols=216 Identities=10% Similarity=0.039 Sum_probs=118.6
Q ss_pred CCCeEEEEcCCCCch-----hH--------------hHH-H-HHHh-hcCCCeEEeecCCCCCCCCCCCccccHHHHHHH
Q 024042 53 KKPSLVLIHGFGPEA-----IW--------------QWR-K-QVQF-FAPHFNVYVPDLIFFGHSTTRSIQRTELFQAAS 110 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~-----~~--------------~~~-~-~~~~-l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 110 (273)
+.|+|.+-||..+.. +. .++ . +... +.++|.|+++|++|+|.+... .........+.
T Consensus 105 ~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~Vv~~Dy~G~G~~y~~-~~~~~~~vlD~ 183 (462)
T 3guu_A 105 PPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAAFIA-GYEEGMAILDG 183 (462)
T ss_dssp SCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEEEEECTTTTTTCTTC-HHHHHHHHHHH
T ss_pred CCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEEEEecCCCCCCcccC-CcchhHHHHHH
Confidence 478999999965421 00 111 1 2344 667799999999999974221 11122233344
Q ss_pred HHHHHHHhCC---ccEEEEEeccchHHHHHHHHhCC----c-ccceEEEecCCCCCCCcc-------hHHHhh--hhh--
Q 024042 111 LGKLLEKIGV---ERFSVVGTSYGGFVAYHMARMWP----E-RVEKVVIASSGVNMKRGD-------NEALVK--RAN-- 171 (273)
Q Consensus 111 ~~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~----~-~v~~~v~~~~~~~~~~~~-------~~~~~~--~~~-- 171 (273)
+.+..+..+. .++.++|||+||..++.++...| + .+.+++..+++.+..... ...+.. ..+
T Consensus 184 vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~ 263 (462)
T 3guu_A 184 IRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLS 263 (462)
T ss_dssp HHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHH
Confidence 4444433232 78999999999999988877543 2 588888888876543211 000000 000
Q ss_pred --hhhh----hhccCCCChHHHHHHhhh--------------h---hccCCCC--Ch--hhHHh--------------hh
Q 024042 172 --LERI----DHLMLPESASQLRTLTGL--------------A---VSKNLDI--VP--DFFFN--------------DF 210 (273)
Q Consensus 172 --~~~~----~~~~~~~~~~~~~~~~~~--------------~---~~~~~~~--~~--~~~~~--------------~~ 210 (273)
...+ ...+.+.....+...... . +...... .+ ...++ ..
T Consensus 264 ~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~ 343 (462)
T 3guu_A 264 LAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVP 343 (462)
T ss_dssp HHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHHCTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCC
T ss_pred hhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHhhccCCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCC
Confidence 0011 111111111111111100 0 0000000 00 11111 22
Q ss_pred hccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 211 VHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 211 ~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
..|++++||.+|.++|.+.++.+.+.+ +.+++++.+++.+|..... .-...+.+||+++
T Consensus 344 ~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~~---~~~~d~l~WL~~r 405 (462)
T 3guu_A 344 KFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAEI---FGLVPSLWFIKQA 405 (462)
T ss_dssp CSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHH---HTHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCchh---hhHHHHHHHHHHH
Confidence 349999999999999999999988876 4578999999999986432 1144556676653
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.57 E-value=6.9e-17 Score=127.12 Aligned_cols=107 Identities=14% Similarity=0.214 Sum_probs=74.9
Q ss_pred CCCCCeEEEEcCCCCch-------hHhHH----HHHHhhcCC-CeEEeecCCCCCCCCCCCc------------------
Q 024042 51 TLKKPSLVLIHGFGPEA-------IWQWR----KQVQFFAPH-FNVYVPDLIFFGHSTTRSI------------------ 100 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~-------~~~~~----~~~~~l~~~-~~v~~~d~~g~g~s~~~~~------------------ 100 (273)
.+.+++|||+||++++. ...|. .+.+.|.+. |+|+++|+||+|.|.....
T Consensus 49 ~~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~ 128 (431)
T 2hih_A 49 PKNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHS 128 (431)
T ss_dssp CSCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHH
T ss_pred cCCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhcccccccccc
Confidence 35678899999997742 14564 478888665 9999999999998752110
Q ss_pred -cccHHHHHHHHHHHHHHhCC-ccEEEEEeccchHHHHHHHHh--------------------------CCcccceEEEe
Q 024042 101 -QRTELFQAASLGKLLEKIGV-ERFSVVGTSYGGFVAYHMARM--------------------------WPERVEKVVIA 152 (273)
Q Consensus 101 -~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~--------------------------~~~~v~~~v~~ 152 (273)
.++.+.+++++.++++.++. ++++|+||||||.+|..++.. +|++|.++|++
T Consensus 129 ~~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i 208 (431)
T 2hih_A 129 EKYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTI 208 (431)
T ss_dssp HHHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEE
Confidence 00111112223334444443 799999999999999998876 68899999999
Q ss_pred cCCCC
Q 024042 153 SSGVN 157 (273)
Q Consensus 153 ~~~~~ 157 (273)
+++..
T Consensus 209 ~tP~~ 213 (431)
T 2hih_A 209 ATPHN 213 (431)
T ss_dssp SCCTT
T ss_pred CCCCC
Confidence 98653
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=6.4e-14 Score=110.64 Aligned_cols=188 Identities=16% Similarity=0.127 Sum_probs=107.6
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-C----eEEeecCCCCC-CCCCCCcccc-HHH
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-F----NVYVPDLIFFG-HSTTRSIQRT-ELF 106 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~----~v~~~d~~g~g-~s~~~~~~~~-~~~ 106 (273)
.|....++.+.|+.. ..++.|+|+++||.+......+..+++.|.+. + .|+.+|++|.+ .+........ .+.
T Consensus 178 ~g~~~~~~vy~P~~~-~~~~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~~~~~~~~~ 256 (403)
T 3c8d_A 178 LKNSRRVWIFTTGDV-TAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLA 256 (403)
T ss_dssp TTEEEEEEEEEC------CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHH
T ss_pred cCCcEEEEEEeCCCC-CCCCCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCCChHHHHHH
Confidence 444555555543221 13567999999994321101122344444433 3 49999988631 1111111111 223
Q ss_pred HHHHHHHHHHHh-C----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCC
Q 024042 107 QAASLGKLLEKI-G----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLP 181 (273)
Q Consensus 107 ~~~~~~~~~~~~-~----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (273)
.++++...++.. . .++++|+|+||||.+|+.++.++|+++++++++++......... +
T Consensus 257 l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~~~-----------------~ 319 (403)
T 3c8d_A 257 VQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGG-----------------Q 319 (403)
T ss_dssp HHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTTS-----------------S
T ss_pred HHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCCCC-----------------C
Confidence 345566666553 2 36899999999999999999999999999999998764322100 0
Q ss_pred CChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCc
Q 024042 182 ESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVP 253 (273)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~ 253 (273)
.. ..+....... . ......|+++.+|+.|..+ .+..+.+.+.+ +.++++.++++ +|..
T Consensus 320 ~~-~~~~~~~~~~---~--------~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~~G-gH~~ 380 (403)
T 3c8d_A 320 QE-GVLLEKLKAG---E--------VSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG-GHDA 380 (403)
T ss_dssp SC-CHHHHHHHTT---S--------SCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC-CSCH
T ss_pred cH-HHHHHHHHhc---c--------ccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEeCC-CCCH
Confidence 00 0111111000 0 0112238999999988643 56777787777 35789999997 6974
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.51 E-value=3.9e-14 Score=109.99 Aligned_cols=102 Identities=21% Similarity=0.231 Sum_probs=70.4
Q ss_pred CCCCeEEEEcCCCCchh------HhHHH----HHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHH-------
Q 024042 52 LKKPSLVLIHGFGPEAI------WQWRK----QVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGK------- 113 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~------~~~~~----~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~------- 113 (273)
..+++|||+||++++.. ..|.. +.+.|.+. |+|+++|++|+|.+... ..+..+.+..
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~~-----a~~l~~~i~~~~vDy~~ 78 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWDR-----ACEAYAQLVGGTVDYGA 78 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHHH-----HHHHHHHHHCEEEECCH
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCcccc-----HHHHHHHHHhhhhhhhh
Confidence 45678999999987641 23653 44788665 99999999999976311 1111111210
Q ss_pred -----------------HHHH-hCCccEEEEEeccchHHHHHHHHh-------------------CC------cccceEE
Q 024042 114 -----------------LLEK-IGVERFSVVGTSYGGFVAYHMARM-------------------WP------ERVEKVV 150 (273)
Q Consensus 114 -----------------~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~-------------------~~------~~v~~~v 150 (273)
++++ .+.++++|+||||||.++..++.. +| ++|.++|
T Consensus 79 ~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV 158 (387)
T 2dsn_A 79 AHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVT 158 (387)
T ss_dssp HHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEE
T ss_pred hhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEE
Confidence 1112 456899999999999999999973 25 6899999
Q ss_pred EecCCCCC
Q 024042 151 IASSGVNM 158 (273)
Q Consensus 151 ~~~~~~~~ 158 (273)
+++++...
T Consensus 159 ~i~tP~~G 166 (387)
T 2dsn_A 159 TIATPHDG 166 (387)
T ss_dssp EESCCTTC
T ss_pred EECCCCCC
Confidence 99986543
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.5e-12 Score=97.89 Aligned_cols=209 Identities=15% Similarity=0.094 Sum_probs=109.7
Q ss_pred CCceeEEecCC-cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC-C-CeEEeecCCCCC-------
Q 024042 24 GLSSQTIDIDD-ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP-H-FNVYVPDLIFFG------- 93 (273)
Q Consensus 24 ~~~~~~~~~~~-g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~-~-~~v~~~d~~g~g------- 93 (273)
.++..++..+. |..+.++.+-|+......+-|+|+++||..... .....+...+.+ . ..|+++++++-.
T Consensus 12 ~~~~~~~~S~~~~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~-~~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~~~R 90 (278)
T 2gzs_A 12 HFSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMD-RLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSR 90 (278)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHH-HCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHH
T ss_pred ceEEEEEEcCCCCceEEEEEECCCCCCCCCCCCEEEEeeChhHHH-HHHHHHHHHhccCCCeEEEEEcCCCCCcCccccc
Confidence 34556666554 566777766543322233446665555533211 111233445554 3 667778876421
Q ss_pred ---CCCCC-------------CccccHHHHHHHH----HHHHHH-h--CCccEEEEEeccchHHHHHHHHhCCcccceEE
Q 024042 94 ---HSTTR-------------SIQRTELFQAASL----GKLLEK-I--GVERFSVVGTSYGGFVAYHMARMWPERVEKVV 150 (273)
Q Consensus 94 ---~s~~~-------------~~~~~~~~~~~~~----~~~~~~-~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v 150 (273)
.+... ........+.+.+ ...++. + +.+++.++||||||.+|+.++.+ |+.+++++
T Consensus 91 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~ 169 (278)
T 2gzs_A 91 AYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYY 169 (278)
T ss_dssp HHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEE
T ss_pred ccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccCeEE
Confidence 11100 0001122223333 222222 1 22569999999999999999999 99999999
Q ss_pred EecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCC----
Q 024042 151 IASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFP---- 226 (273)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~---- 226 (273)
.++|...... ..+... .... ... . .-..|+++.+|+.|...+
T Consensus 170 ~~s~~~~~~~---~~~~~~---------------------~~~~-~~~---~------~~~~~i~l~~G~~d~~~~~~~~ 215 (278)
T 2gzs_A 170 SASPSLGRGY---DALLSR---------------------VTAV-EPL---Q------FCTKHLAIMEGSATQGDNRETH 215 (278)
T ss_dssp EESGGGSTTH---HHHHHH---------------------HHTS-CTT---T------TTTCEEEEEECCC---------
T ss_pred EeCcchhcCc---chHHHH---------------------HHHh-hcc---C------CCCCcEEEEecCccccccccch
Confidence 9987543210 000000 0000 000 0 012279999999997643
Q ss_pred ----hHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 227 ----LKMATELKELL---GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 227 ----~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+..+.+.+.+ +.+.++.++++++|.... ...+.+.+. ||.+
T Consensus 216 ~~~~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~~~--~~~~~~~l~-fl~~ 264 (278)
T 2gzs_A 216 AVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMF--NASFRQALL-DISG 264 (278)
T ss_dssp --CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHHH--HHHHHHHHH-HHTT
T ss_pred hhhhHHHHHHHHHHHHcCCCeeEEEEcCCCCccchh--HHHHHHHHH-HHhh
Confidence 56666666665 467889999998897322 234445444 6643
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.33 E-value=9.7e-11 Score=89.81 Aligned_cols=209 Identities=11% Similarity=0.032 Sum_probs=114.8
Q ss_pred CCceeEEecC-CcceEEeecCCccCCCC-CCCCCeEEEEcCCCCchhHhHHHHHHhhcC-------CCeEEeecCCCCC-
Q 024042 24 GLSSQTIDID-DETTLHFWGPKLEDDHK-TLKKPSLVLIHGFGPEAIWQWRKQVQFFAP-------HFNVYVPDLIFFG- 93 (273)
Q Consensus 24 ~~~~~~~~~~-~g~~l~~~~~~~~~~~~-~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~-------~~~v~~~d~~g~g- 93 (273)
.++..++..+ -|.+..++.+-|+.-.. ..+-|+|+++||... . .....+.+.+.. .+-|+.++.....
T Consensus 11 ~v~~~~~~S~~l~~~r~~~VylP~~y~~~~~~yPVlylldG~~~-f-~~~~~~~~~l~~~~~~~~~~~IvV~i~~~~R~~ 88 (331)
T 3gff_A 11 EYQSKRLESRLLKETREYVIALPEGYAQSLEAYPVVYLLDGEDQ-F-DHMASLLQFLSQGTMPQIPKVIIVGIHNTNRMR 88 (331)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTTGGGSCCCEEEEEESSHHHH-H-HHHHHHHHHHTCSSSCSSCCCEEEEECCSSHHH
T ss_pred eEEEEEEEecCCCCeEEEEEEeCCCCCCCCCCccEEEEecChhh-h-HHHHHHHHHHHhhhhcCCCCEEEEEECCCCccc
Confidence 3445555554 35566677666543222 345688999999421 1 112233444432 2567776642110
Q ss_pred -CCC------C--------CC----ccccHHHHHHHHHHHHHHh-CC-ccEEEEEeccchHHHHHHHHhCCcccceEEEe
Q 024042 94 -HST------T--------RS----IQRTELFQAASLGKLLEKI-GV-ERFSVVGTSYGGFVAYHMARMWPERVEKVVIA 152 (273)
Q Consensus 94 -~s~------~--------~~----~~~~~~~~~~~~~~~~~~~-~~-~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~ 152 (273)
.+. . .+ ...-.+...+++...++.. .. .+.+++||||||..|+.++.++|+.+++++.+
T Consensus 89 dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~ 168 (331)
T 3gff_A 89 DYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLAL 168 (331)
T ss_dssp HSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEE
T ss_pred ccCCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEe
Confidence 000 0 00 0011222334455555443 22 23479999999999999999999999999999
Q ss_pred cCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCC-------CC
Q 024042 153 SSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQ-------IF 225 (273)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~-------~~ 225 (273)
+|....... .+.. ........ .. ....|+++.+|+.|. .+
T Consensus 169 S~~~w~~~~---~~~~-----------------~~~~~~~~---~~----------~~~~~l~l~~G~~d~~~~~~~~~~ 215 (331)
T 3gff_A 169 DTSLWFDSP---HYLT-----------------LLEERVVK---GD----------FKQKQLFMAIANNPLSPGFGVSSY 215 (331)
T ss_dssp SCCTTTTTT---HHHH-----------------HHHHHHHH---CC----------CSSEEEEEEECCCSEETTTEECCH
T ss_pred CchhcCChH---HHHH-----------------HHHHHhhc---cc----------CCCCeEEEEeCCCCCCCccchHHH
Confidence 986543211 0000 00000000 00 012389999999998 34
Q ss_pred ChHHHHHHHHHhc------CCcEEEEeCCCCCCcCcCChhhHHHHHHHHh
Q 024042 226 PLKMATELKELLG------KKARLEIIENTSHVPQIENPGLFNSIVKNFL 269 (273)
Q Consensus 226 ~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 269 (273)
+.+.++++.+.+. -+.++.++|+.+|.... +..+.+.+..++
T Consensus 216 ~~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~--~~~~~~~l~~lf 263 (331)
T 3gff_A 216 HKDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSVS--HIGLYDGIRHLF 263 (331)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECCCCCccccH--HHHHHHHHHHHH
Confidence 5556666666551 25778899999998543 445555554444
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=5.1e-11 Score=90.44 Aligned_cols=123 Identities=11% Similarity=0.084 Sum_probs=75.0
Q ss_pred CccEEEEEeccchHHHHHHHHhCCcccc-eEEEecCCCCCCCcchHHHhhhhhhhhhhhccC-CCChHHHHHHhhhhhcc
Q 024042 120 VERFSVVGTSYGGFVAYHMARMWPERVE-KVVIASSGVNMKRGDNEALVKRANLERIDHLML-PESASQLRTLTGLAVSK 197 (273)
Q Consensus 120 ~~~i~l~G~S~Gg~~a~~~a~~~~~~v~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 197 (273)
.++|+|.|+|+||.+++.++..+|+.++ +++++++.......... . .......+. ......+...... .
T Consensus 10 ~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~---~ 80 (318)
T 2d81_A 10 PNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQY---Y---TSCMYNGYPSITTPTANMKSWSG---N 80 (318)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSC---G---GGGSTTCCCCCHHHHHHHHHHBT---T
T ss_pred cceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHH---H---HHHhhccCCCCCCHHHHHHHhhc---c
Confidence 4789999999999999999999999998 88777653322111000 0 000000000 0001111111110 0
Q ss_pred CCCCChhhHHhhh-hccEEEEecCCCCCCChHHHHHHHHHhc---C--CcEEEEeCCCCCCcCcC
Q 024042 198 NLDIVPDFFFNDF-VHDVLIVWGDQDQIFPLKMATELKELLG---K--KARLEIIENTSHVPQIE 256 (273)
Q Consensus 198 ~~~~~~~~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~--~~~~~~~~~~gH~~~~~ 256 (273)
+......+ ..|++++||++|.+||++.++++.+.+. . +++++.++++||....+
T Consensus 81 -----~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~ 140 (318)
T 2d81_A 81 -----QIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTD 140 (318)
T ss_dssp -----TBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEES
T ss_pred -----cCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccC
Confidence 00111112 2389999999999999999999998872 1 46889999999975433
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=99.21 E-value=2.4e-10 Score=92.46 Aligned_cols=120 Identities=22% Similarity=0.163 Sum_probs=74.3
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhc-CC-CeEEeecCC----CCCCCCCC----
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFA-PH-FNVYVPDLI----FFGHSTTR---- 98 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~-~~-~~v~~~d~~----g~g~s~~~---- 98 (273)
.+|...+.++... ...++.|+||++||.+ ++. ..+......|. ++ +.|+.+|+| |++.+...
T Consensus 79 ~edcL~l~v~~P~----~~~~~~PviV~iHGGg~~~g~~-~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~ 153 (489)
T 1qe3_A 79 SEDCLYVNVFAPD----TPSQNLPVMVWIHGGAFYLGAG-SEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAY 153 (489)
T ss_dssp CSCCCEEEEEEEC----SSCCSEEEEEEECCSTTTSCCT-TSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTS
T ss_pred CCCCCEEEEEeCC----CCCCCCCEEEEECCCccccCCC-CCcccCHHHHHhcCCEEEEecCccCcccccCccccccccC
Confidence 3466667666542 1123478999999965 333 22212223333 33 999999999 56554321
Q ss_pred CccccHHHHHHHHHHHHHH---h--CCccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCC
Q 024042 99 SIQRTELFQAASLGKLLEK---I--GVERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGV 156 (273)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~---~--~~~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~ 156 (273)
.......+....+..+.+. + +.++|.|+|+|+||.++..++... ++.++++|+.++..
T Consensus 154 ~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 154 SDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred CCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 1223344444444433333 2 336899999999999988887653 46799999999876
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=99.16 E-value=1.8e-08 Score=80.88 Aligned_cols=122 Identities=14% Similarity=0.156 Sum_probs=81.7
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHH-----------------hhcCCCeEEeecC-CCCCCCC
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQ-----------------FFAPHFNVYVPDL-IFFGHST 96 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~-----------------~l~~~~~v~~~d~-~g~g~s~ 96 (273)
+..+.||.+.+++.......|++|+++|.++++ ..+..+.+ .+.+...++.+|. .|.|.|.
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~S-S~~g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy 126 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCS-SMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSV 126 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBC-THHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCS
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchH-hhhhhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccC
Confidence 567888877533112245689999999998887 55533321 1223468999997 5999886
Q ss_pred CCCcc----------ccHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHHhC------------Ccccc
Q 024042 97 TRSIQ----------RTELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMARMW------------PERVE 147 (273)
Q Consensus 97 ~~~~~----------~~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~~~------------~~~v~ 147 (273)
..... .+.+..++++..+++.. ...+++|.|+|+||..+..+|... +-.++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLk 206 (483)
T 1ac5_A 127 EQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLK 206 (483)
T ss_dssp SCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEE
T ss_pred CcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCccccee
Confidence 54321 25566677776666553 347899999999999887776431 12478
Q ss_pred eEEEecCCCC
Q 024042 148 KVVIASSGVN 157 (273)
Q Consensus 148 ~~v~~~~~~~ 157 (273)
++++-++..+
T Consensus 207 Gi~IGNg~~d 216 (483)
T 1ac5_A 207 ALLIGNGWID 216 (483)
T ss_dssp EEEEEEECCC
T ss_pred eeEecCCccc
Confidence 8888777654
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=5.7e-09 Score=78.77 Aligned_cols=107 Identities=17% Similarity=0.160 Sum_probs=64.0
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHH--Hhh-cC-CCeEEeecCCCC----------------CCCCCCCc-------cc-
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQV--QFF-AP-HFNVYVPDLIFF----------------GHSTTRSI-------QR- 102 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~--~~l-~~-~~~v~~~d~~g~----------------g~s~~~~~-------~~- 102 (273)
+++-|+|.++||.+++. ..|.... ..+ .+ ...++.+|..-. +.+..... .+
T Consensus 46 ~~~~PVLYlLhG~~~~~-~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~ 124 (299)
T 4fol_A 46 NKRIPTVFYLSGLTCTP-DNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQ 124 (299)
T ss_dssp --CBCEEEEECCTTCCH-HHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCB
T ss_pred CCCcCEEEEECCCCCCh-HHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCcc
Confidence 34579999999999988 7665432 222 22 256666653211 11100000 01
Q ss_pred cHHHHHHHHHHHHHHh-C---------CccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCCC
Q 024042 103 TELFQAASLGKLLEKI-G---------VERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVNM 158 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~-~---------~~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~~ 158 (273)
-.....+++..+++.. . .++..|.||||||.-|+.++.++ |++..++...++....
T Consensus 125 ~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~p 192 (299)
T 4fol_A 125 MYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIVNP 192 (299)
T ss_dssp HHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCCCG
T ss_pred HHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccccCc
Confidence 1234566777777542 2 24689999999999999999985 5567777776665543
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=99.11 E-value=2.4e-10 Score=92.61 Aligned_cols=121 Identities=21% Similarity=0.180 Sum_probs=80.1
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcC-C-CeEEeecCC----CCCCCCCCCc--
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAP-H-FNVYVPDLI----FFGHSTTRSI-- 100 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~-~-~~v~~~d~~----g~g~s~~~~~-- 100 (273)
.+|+..+..+... ....+.|+||++||.+ ++. ..+......|.+ + +.|+.+|+| |++.+.....
T Consensus 81 ~edcl~l~v~~P~----~~~~~~Pviv~iHGGg~~~g~~-~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~ 155 (498)
T 2ogt_A 81 SEDGLYLNIWSPA----ADGKKRPVLFWIHGGAFLFGSG-SSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEA 155 (498)
T ss_dssp BSCCCEEEEEESC----SSSCCEEEEEEECCSTTTSCCT-TCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGG
T ss_pred CCCCcEEEEEecC----CCCCCCcEEEEEcCCccCCCCC-CCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhcccc
Confidence 4577788877652 2245678999999976 443 222122233333 3 999999999 7877654221
Q ss_pred -----cccHHHHHHHHHHHHHHh---C--CccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCC
Q 024042 101 -----QRTELFQAASLGKLLEKI---G--VERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVN 157 (273)
Q Consensus 101 -----~~~~~~~~~~~~~~~~~~---~--~~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~ 157 (273)
.....+....+..+.+.. + .++|.|+|+|.||.++..++... ...++++|+.++...
T Consensus 156 ~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 156 YAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp GTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred ccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 233445555554444443 3 47899999999999998887753 346999999998665
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=5.1e-08 Score=76.69 Aligned_cols=128 Identities=16% Similarity=0.200 Sum_probs=83.7
Q ss_pred eeEEecC-CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHH-----------------hhcCCCeEEeec
Q 024042 27 SQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQ-----------------FFAPHFNVYVPD 88 (273)
Q Consensus 27 ~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~-----------------~l~~~~~v~~~d 88 (273)
.-++++. ++..+.||...++. ...+.|++|+++|.++++ ..+..+.+ .+.+..+++.+|
T Consensus 18 sGYv~v~~~~~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~S-S~~g~~~e~GP~~~~~~~~l~~n~~sW~~~an~lfiD 94 (421)
T 1cpy_A 18 TGYLDVEDEDKHFFFWTFESRN--DPAKDPVILWLNGGPGCS-SLTGLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLD 94 (421)
T ss_dssp EEEEEETTTTEEEEEEEECCSS--CTTTSCEEEEECCTTTBC-THHHHTTTTSSEEEETTTEEEECTTCGGGGSEEECCC
T ss_pred EEEEEcCCCCcEEEEEEEEeCC--CCCCCCEEEEECCCCchH-hHHHHHHccCCcEECCCCceeECCcccccccCEEEec
Confidence 3466765 46789888775432 245689999999998887 55432221 122236799999
Q ss_pred CC-CCCCCCCCCc-cccHHHHHHHHHHHHHHh-------CC--ccEEEEEeccchHHHHHHHHhCC------cccceEEE
Q 024042 89 LI-FFGHSTTRSI-QRTELFQAASLGKLLEKI-------GV--ERFSVVGTSYGGFVAYHMARMWP------ERVEKVVI 151 (273)
Q Consensus 89 ~~-g~g~s~~~~~-~~~~~~~~~~~~~~~~~~-------~~--~~i~l~G~S~Gg~~a~~~a~~~~------~~v~~~v~ 151 (273)
.| |.|.|..... ..+.+..++++..+++.. .. +++.|.|.|+||..+-.+|...- -.++++++
T Consensus 95 qPvGtGfSy~~~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~I 174 (421)
T 1cpy_A 95 QPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLI 174 (421)
T ss_dssp CSTTSTTCEESSCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEE
T ss_pred CCCcccccCCCCCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEe
Confidence 54 8888864433 234445566665555543 33 68999999999998887775431 24789888
Q ss_pred ecCCCC
Q 024042 152 ASSGVN 157 (273)
Q Consensus 152 ~~~~~~ 157 (273)
-++..+
T Consensus 175 GNg~~d 180 (421)
T 1cpy_A 175 GNGLTD 180 (421)
T ss_dssp ESCCCC
T ss_pred cCcccC
Confidence 776554
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.02 E-value=6.4e-10 Score=100.41 Aligned_cols=200 Identities=11% Similarity=0.089 Sum_probs=115.0
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC-ccEEEEEecc
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV-ERFSVVGTSY 130 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~ 130 (273)
...++++++|+.++.. ..|..+...+. .+.++.++.++. +..++...+.++.... .++.++|||+
T Consensus 1056 ~~~~~L~~l~~~~g~~-~~y~~la~~L~-~~~v~~l~~~~~------------~~~~~~~~~~i~~~~~~gp~~l~G~S~ 1121 (1304)
T 2vsq_A 1056 DQEQIIFAFPPVLGYG-LMYQNLSSRLP-SYKLCAFDFIEE------------EDRLDRYADLIQKLQPEGPLTLFGYSA 1121 (1304)
T ss_dssp TSCCEEECCCCTTCBG-GGGHHHHTTCC-SCEEEECBCCCS------------TTHHHHHHHHHHHHCCSSCEEEEEETT
T ss_pred ccCCcceeecccccch-HHHHHHHhccc-ccceEeecccCH------------HHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 3457899999998888 88888888887 788988877422 2234444555555644 5899999999
Q ss_pred chHHHHHHHHhCC---cccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccC--------CCChHHHHHHhhhhhccCC
Q 024042 131 GGFVAYHMARMWP---ERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML--------PESASQLRTLTGLAVSKNL 199 (273)
Q Consensus 131 Gg~~a~~~a~~~~---~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 199 (273)
||.+|..+|.+.. ..+..++++++....................+..... ............. +....
T Consensus 1122 Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~~ 1200 (1304)
T 2vsq_A 1122 GCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAF-YSYYV 1200 (1304)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC-----CHHHHHHHHHTTCC-------CTTTGGGHHHHHHH-HHHHH
T ss_pred CchHHHHHHHHHHhCCCceeEEEEecCcccccccccccccchhhHHHHHHhhhhhhhhcchhcchHHHHHHHHH-HHHHH
Confidence 9999999987643 4578888888654322110000000000000100000 0001111111100 00000
Q ss_pred CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCCh--hhHHHHHHHHhcc
Q 024042 200 DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP--GLFNSIVKNFLRG 271 (273)
Q Consensus 200 ~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~--~~~~~~i~~fl~~ 271 (273)
.... ...+..|++++.|++|.. +.+....|.+......+++.++ ++|+.+++.+ +.+.+.|.+||.+
T Consensus 1201 ~~~~---~~~~~~pv~l~~~~~~~~-~~~~~~~W~~~~~~~~~~~~v~-G~H~~ml~~~~~~~~a~~l~~~L~~ 1269 (1304)
T 2vsq_A 1201 NLIS---TGQVKADIDLLTSGADFD-IPEWLASWEEATTGVYRMKRGF-GTHAEMLQGETLDRNAEILLEFLNT 1269 (1304)
T ss_dssp C--------CBSSEEEEEECSSCCC-CCSSEECSSTTBSSCCCEEECS-SCTTGGGSHHHHHHHHHHHHHHHHC
T ss_pred HHhc---cCCcCCCEEEEEecCccc-cccchhhHHHHhCCCeEEEEeC-CCHHHHCCCHHHHHHHHHHHHHHhc
Confidence 0000 134556999999998863 2222233444443567788898 7999888754 4888999998874
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.94 E-value=1.8e-08 Score=80.15 Aligned_cols=129 Identities=13% Similarity=0.121 Sum_probs=86.1
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHH------------------hhcCCCeEEeec
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQ------------------FFAPHFNVYVPD 88 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~------------------~l~~~~~v~~~d 88 (273)
.-++++.++..+.||....+. .....|++|++||.++++ ..+..+.+ .+.+..+++.+|
T Consensus 23 sGyv~v~~~~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~S-s~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiD 99 (452)
T 1ivy_A 23 SGYLKSSGSKHLHYWFVESQK--DPENSPVVLWLNGGPGCS-SLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLE 99 (452)
T ss_dssp EEEEECSTTEEEEEEEECCSS--CGGGSCEEEEECCTTTBC-THHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEEC
T ss_pred EEEEeeCCCCeEEEEEEEcCC--CCCCCCEEEEECCCCcHH-HHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEe
Confidence 347788777889998875332 234689999999998887 55533221 112347899999
Q ss_pred C-CCCCCCCCCCccc--cHHHHHH----HHHHHHHHh---CCccEEEEEeccchHHHHHHHHh----CCcccceEEEecC
Q 024042 89 L-IFFGHSTTRSIQR--TELFQAA----SLGKLLEKI---GVERFSVVGTSYGGFVAYHMARM----WPERVEKVVIASS 154 (273)
Q Consensus 89 ~-~g~g~s~~~~~~~--~~~~~~~----~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~----~~~~v~~~v~~~~ 154 (273)
. +|.|.|......+ +....++ .+..+++.. ..++++|.|+|+||..+..+|.. .+-.++++++.++
T Consensus 100 qP~GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~ 179 (452)
T 1ivy_A 100 SPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNG 179 (452)
T ss_dssp CSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESC
T ss_pred cCCCCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCC
Confidence 6 6999987433222 2233343 344555542 44789999999999966665543 3556899999998
Q ss_pred CCCC
Q 024042 155 GVNM 158 (273)
Q Consensus 155 ~~~~ 158 (273)
..+.
T Consensus 180 ~~d~ 183 (452)
T 1ivy_A 180 LSSY 183 (452)
T ss_dssp CSBH
T ss_pred ccCh
Confidence 7653
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=3.1e-08 Score=72.04 Aligned_cols=128 Identities=15% Similarity=0.129 Sum_probs=88.5
Q ss_pred eEEecC--CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH-HHHHH------------------hhcCCCeEEe
Q 024042 28 QTIDID--DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW-RKQVQ------------------FFAPHFNVYV 86 (273)
Q Consensus 28 ~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-~~~~~------------------~l~~~~~v~~ 86 (273)
-++++. .|..+.||.+.++. ...++|++|+++|.++++ ..+ ..+.+ .+.+..+++.
T Consensus 22 Gy~~v~~~~~~~lFywf~es~~--~~~~~Pl~lwlnGGPGcS-S~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlf 98 (255)
T 1whs_A 22 GYITVDEGAGRSLFYLLQEAPE--DAQPAPLVLWLNGGPGCS-SVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLF 98 (255)
T ss_dssp EEEEEETTTTEEEEEEEECCCG--GGCSCCEEEEECCTTTBC-TTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEE
T ss_pred EEEECCCCCCcEEEEEEEEecC--CCCCCCEEEEECCCCchH-HHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEE
Confidence 355554 57789998875432 245689999999998887 554 43321 1223478999
Q ss_pred ecCC-CCCCCCCCCc----cccHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHHhC------Ccccce
Q 024042 87 PDLI-FFGHSTTRSI----QRTELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMARMW------PERVEK 148 (273)
Q Consensus 87 ~d~~-g~g~s~~~~~----~~~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~~~------~~~v~~ 148 (273)
+|.| |.|.|..... ..+.+..++++..+++.. ..++++|.|+|+||..+..+|... .-.+++
T Consensus 99 iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkG 178 (255)
T 1whs_A 99 LDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKG 178 (255)
T ss_dssp ECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred EecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccce
Confidence 9975 9998864432 235666677776666542 346899999999999887777542 235899
Q ss_pred EEEecCCCCC
Q 024042 149 VVIASSGVNM 158 (273)
Q Consensus 149 ~v~~~~~~~~ 158 (273)
+++.++..+.
T Consensus 179 i~ign~~~d~ 188 (255)
T 1whs_A 179 FMVGNGLIDD 188 (255)
T ss_dssp EEEEEECCBH
T ss_pred EEecCCccCH
Confidence 9999987764
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=5.1e-08 Score=75.30 Aligned_cols=144 Identities=13% Similarity=0.138 Sum_probs=75.9
Q ss_pred CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHH-hhhhh--hhhh------hhccCCCChHHHHH
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL-VKRAN--LERI------DHLMLPESASQLRT 189 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~-~~~~~--~~~~------~~~~~~~~~~~~~~ 189 (273)
+.++|.++|||+||..|+.+++..+ ||+.+|..++............ ....+ .... ..++.+. +..
T Consensus 217 D~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~~G~~~~R~~~~~~~~Ge~v~~~~~~~ge~~Wf~~~----f~~ 291 (433)
T 4g4g_A 217 DTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGAGGAACWRISDQQKAAGANIQTAAQIITENPWFSRN----FDP 291 (433)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCTTTTSCHHHHHHHHHTTCCCCCHHHHTTTCCCSCTT----TGG
T ss_pred ChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCCCchhhhhhchhhcccCcchhhhhcccCCccccchh----hHh
Confidence 4479999999999999999999875 7999999887554332211100 00000 0000 0011110 000
Q ss_pred HhhhhhccCCCCChhhHHhhh--hccEEEEecCCCCCCChHHH-------HHHHHHhc--CCcEEEEeCCCCCCc-CcCC
Q 024042 190 LTGLAVSKNLDIVPDFFFNDF--VHDVLIVWGDQDQIFPLKMA-------TELKELLG--KKARLEIIENTSHVP-QIEN 257 (273)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~--~~p~l~i~g~~D~~~~~~~~-------~~~~~~~~--~~~~~~~~~~~gH~~-~~~~ 257 (273)
+.... .... .....+..+ ..|+|++.| +|..++++.. +..++.++ .+..+...++.+|+. ..+.
T Consensus 292 y~~~~--~~LP-fD~heL~ALiAPRPlLv~~g-~D~w~~p~g~~~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~fp~~~ 367 (433)
T 4g4g_A 292 HVNSI--TSVP-QDHHLLAALIVPRGLAVFEN-NIDWLGPVSTTGCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQFPSSQ 367 (433)
T ss_dssp GTTCG--GGSS-CCGGGHHHHHTTSEEEEEEC-CCTTTCHHHHHHHHHHHHHHHHHHTCGGGEEEEECCSSCTTCCCGGG
T ss_pred hcccc--ccCC-cCHHHHHHhhCCceEEEecC-CCCcCCcHHHHHHHHHHHHHHHHcCCccceEEEeeCCCCcccCCHHH
Confidence 00000 0000 011111111 228999999 8988887533 33344553 456666555556764 3345
Q ss_pred hhhHHHHHHHHhcc
Q 024042 258 PGLFNSIVKNFLRG 271 (273)
Q Consensus 258 ~~~~~~~i~~fl~~ 271 (273)
.+++.+.+.+||+.
T Consensus 368 r~~~~~F~~k~Lkg 381 (433)
T 4g4g_A 368 NQDLNSYINYFLLG 381 (433)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCC
Confidence 56677777777753
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.87 E-value=2.7e-07 Score=70.42 Aligned_cols=37 Identities=22% Similarity=0.175 Sum_probs=32.1
Q ss_pred ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 121 ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 121 ~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
+||.++|||+||..|+.+++..+ ||+.+|..++....
T Consensus 185 ~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~~G 221 (375)
T 3pic_A 185 TKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGAGG 221 (375)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTT
T ss_pred hhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCCCc
Confidence 78999999999999999999875 79999998865443
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.84 E-value=6.1e-09 Score=85.13 Aligned_cols=121 Identities=17% Similarity=0.102 Sum_probs=76.1
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCC----CCCCCC---CCC
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLI----FFGHST---TRS 99 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~----g~g~s~---~~~ 99 (273)
.+|...+.++... ....+.|+||++||.+ ++. .........|.+ ++.|+.+++| |++.+. ...
T Consensus 89 ~edcl~lnv~~P~----~~~~~~Pv~v~iHGGg~~~g~~-~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~ 163 (529)
T 1p0i_A 89 SEDCLYLNVWIPA----PKPKNATVLIWIYGGGFQTGTS-SLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAP 163 (529)
T ss_dssp CSCCCEEEEEEES----SCCSSEEEEEEECCSTTTSCCT-TCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSC
T ss_pred CCcCCeEEEeeCC----CCCCCCeEEEEECCCccccCCC-CccccChHHHhccCCeEEEEecccccccccccCCCCCCCc
Confidence 4577778777653 1125679999999964 222 221111233433 5999999999 444431 112
Q ss_pred ccccHHHHHHHHHHHHHH---hCC--ccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCC
Q 024042 100 IQRTELFQAASLGKLLEK---IGV--ERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVN 157 (273)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~---~~~--~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~ 157 (273)
......++...+..+.+. ++. ++|.|+|+|.||.++..++... ...++++|+.++...
T Consensus 164 ~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 164 GNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp SCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 233445555444444443 333 6899999999999998888764 356999999988654
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.82 E-value=6.6e-09 Score=85.16 Aligned_cols=121 Identities=19% Similarity=0.090 Sum_probs=75.0
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhc--CCCeEEeecCC----CCCCCC---CCC
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFA--PHFNVYVPDLI----FFGHST---TRS 99 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~--~~~~v~~~d~~----g~g~s~---~~~ 99 (273)
.+|...+.++.... ....+.|+||++||.+ ++. .........|. .++.|+.+|+| |++.+. ...
T Consensus 93 ~edcl~l~v~~P~~---~~~~~~Pviv~iHGGg~~~g~~-~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~ 168 (543)
T 2ha2_A 93 SEDCLYLNVWTPYP---RPASPTPVLIWIYGGGFYSGAA-SLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAP 168 (543)
T ss_dssp ESCCCEEEEEEESS---CCSSCEEEEEEECCSTTTCCCT-TSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCC
T ss_pred CCcCCeEEEeecCC---CCCCCCeEEEEECCCccccCCC-CCCcCChHHHHhcCCEEEEEecccccccccccCCCCCCCC
Confidence 45778888776431 1133458999999965 222 21111223343 35999999999 444431 112
Q ss_pred ccccHHHHHHHHHHHHHH---hC--CccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCC
Q 024042 100 IQRTELFQAASLGKLLEK---IG--VERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGV 156 (273)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~---~~--~~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~ 156 (273)
......+....+..+.+. ++ .++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 169 ~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 169 GNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp SCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 233455555444444443 33 37899999999999988777653 45699999998854
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.79 E-value=8.2e-09 Score=84.46 Aligned_cols=121 Identities=17% Similarity=0.113 Sum_probs=76.1
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhc--CCCeEEeecCC----CCCCCC---CCC
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFA--PHFNVYVPDLI----FFGHST---TRS 99 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~--~~~~v~~~d~~----g~g~s~---~~~ 99 (273)
.+|...+..+... ....+.|+||++||.+ ++. .........|. .++.|+.+++| |+..+. ...
T Consensus 91 sedcl~lnv~~P~----~~~~~~Pv~v~iHGG~~~~g~~-~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~ 165 (537)
T 1ea5_A 91 SEDCLYLNIWVPS----PRPKSTTVMVWIYGGGFYSGSS-TLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAP 165 (537)
T ss_dssp CSCCCEEEEEECS----SCCSSEEEEEEECCSTTTCCCT-TCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSC
T ss_pred CCcCCeEEEeccC----CCCCCCeEEEEECCCcccCCCC-CCCccChHHHHhcCCEEEEEeccCccccccccCCCCCCCc
Confidence 4577788877653 1235679999999954 222 11111123333 34999999999 444331 112
Q ss_pred ccccHHHHHHHHHHHHHH---hC--CccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCC
Q 024042 100 IQRTELFQAASLGKLLEK---IG--VERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVN 157 (273)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~---~~--~~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~ 157 (273)
......++...+..+.+. ++ .++|.|+|+|.||.++..++... +..++++|+.++...
T Consensus 166 ~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 166 GNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp SCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred CccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 233455555555444444 33 37899999999999998877652 356999999988654
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=4.8e-08 Score=80.08 Aligned_cols=122 Identities=20% Similarity=0.162 Sum_probs=75.8
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhc-CCCeEEeecCC----CCCCCCCC--Ccc
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFA-PHFNVYVPDLI----FFGHSTTR--SIQ 101 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~-~~~~v~~~d~~----g~g~s~~~--~~~ 101 (273)
.+|...+.++... ......+.|+||++||.+ ++. ..|... .... .++.|+.+|+| |++.+... ...
T Consensus 95 ~edcl~lnv~~P~--~~~~~~~~Pv~v~iHGG~~~~g~~-~~~~~~-~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~~n 170 (542)
T 2h7c_A 95 SEDCLYLNIYTPA--DLTKKNRLPVMVWIHGGGLMVGAA-STYDGL-ALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGN 170 (542)
T ss_dssp ESCCCEEEEEECS--CTTSCCCEEEEEEECCSTTTSCCS-TTSCCH-HHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCC
T ss_pred CCCCcEEEEEECC--CCCCCCCCCEEEEECCCcccCCCc-cccCHH-HHHhcCCEEEEecCCCCccccCCCCCcccCccc
Confidence 4577788877653 111234678999999954 222 223221 1222 35999999999 45443221 222
Q ss_pred ccHHHHHHHHHHHHHH---hC--CccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCC
Q 024042 102 RTELFQAASLGKLLEK---IG--VERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVN 157 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~---~~--~~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~ 157 (273)
....++...+..+.+. ++ .++|.|+|+|.||.++..++... +..++++|+.++...
T Consensus 171 ~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 171 WGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 3444444444444333 33 37899999999999998888763 567999999987654
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.69 E-value=4.3e-08 Score=79.96 Aligned_cols=124 Identities=15% Similarity=0.077 Sum_probs=73.8
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHhH--HHHHHhhcCCCeEEeecCC----CCCCCCCC----C
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQW--RKQVQFFAPHFNVYVPDLI----FFGHSTTR----S 99 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~~--~~~~~~l~~~~~v~~~d~~----g~g~s~~~----~ 99 (273)
.+|...+..+... ......+.|+||++||.+... ...| ..++.....++.|+.+|+| |++.+... .
T Consensus 82 ~edcl~l~v~~P~--~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~ 159 (522)
T 1ukc_A 82 SEDCLFINVFKPS--TATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGD 159 (522)
T ss_dssp ESCCCEEEEEEET--TCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSC
T ss_pred CCcCCEEEEEECC--CCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccCC
Confidence 3466677776542 111234578999999965221 0122 2222222345999999999 45443211 1
Q ss_pred ccccHHHHHHHHHHHHHH---hC--CccEEEEEeccchHHHHHHHHhC----CcccceEEEecCCCC
Q 024042 100 IQRTELFQAASLGKLLEK---IG--VERFSVVGTSYGGFVAYHMARMW----PERVEKVVIASSGVN 157 (273)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~---~~--~~~i~l~G~S~Gg~~a~~~a~~~----~~~v~~~v~~~~~~~ 157 (273)
....+.+....+..+.+. ++ .++|.|+|+|.||..+..++... +..++++|+.++...
T Consensus 160 ~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~ 226 (522)
T 1ukc_A 160 LNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 226 (522)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcC
Confidence 123444544444444443 33 36899999999998776666543 457899999888654
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.62 E-value=3.5e-08 Score=81.03 Aligned_cols=123 Identities=14% Similarity=0.092 Sum_probs=73.1
Q ss_pred cCCcceEEeecCCc---cCCCCCCC----CCeEEEEcCCC---CchhHhHHHHHHhhcCC-CeEEeecCCC----CCCCC
Q 024042 32 IDDETTLHFWGPKL---EDDHKTLK----KPSLVLIHGFG---PEAIWQWRKQVQFFAPH-FNVYVPDLIF----FGHST 96 (273)
Q Consensus 32 ~~~g~~l~~~~~~~---~~~~~~~~----~~~vi~~hG~~---~~~~~~~~~~~~~l~~~-~~v~~~d~~g----~g~s~ 96 (273)
.+|...+.++.... .. ...++ .|+||++||.+ ++. .........|.+. +.|+.+|+|. +..+.
T Consensus 87 ~edcL~lnv~~P~~~~~~~-~~~~~~~~~~Pviv~iHGGg~~~g~~-~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~ 164 (551)
T 2fj0_A 87 SEACIHANIHVPYYALPRD-AADKNRFAGLPVLVFIHGGGFAFGSG-DSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLN 164 (551)
T ss_dssp CSCCCEEEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCS-CTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCS
T ss_pred CCCCeEEEEEecCcccccc-ccccCcCCCCCEEEEEcCCccccCCC-cccccCHHHHHhCCeEEEEeCCcCCccccccCc
Confidence 44667777775410 11 11223 68999999954 222 2111223344444 9999999993 33222
Q ss_pred C--CCccccHHHHHHHHHHHHHH---hC--CccEEEEEeccchHHHHHHHHh--CCcccceEEEecCCC
Q 024042 97 T--RSIQRTELFQAASLGKLLEK---IG--VERFSVVGTSYGGFVAYHMARM--WPERVEKVVIASSGV 156 (273)
Q Consensus 97 ~--~~~~~~~~~~~~~~~~~~~~---~~--~~~i~l~G~S~Gg~~a~~~a~~--~~~~v~~~v~~~~~~ 156 (273)
. ........+....+..+.+. ++ .++|.|+|+|.||.++..++.. .+..++++|+.++..
T Consensus 165 ~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 165 STSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp SSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 1 12233455555555444443 33 4789999999999999888865 345799999998864
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.59 E-value=1.4e-07 Score=77.27 Aligned_cols=123 Identities=15% Similarity=0.129 Sum_probs=73.6
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHhH--HHHH-HhhcC--CCeEEeecCCC----CCCCC----
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQW--RKQV-QFFAP--HFNVYVPDLIF----FGHST---- 96 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~~--~~~~-~~l~~--~~~v~~~d~~g----~g~s~---- 96 (273)
.+|...+..+... ......+.|+||++||.+... ...| ..++ ..++. ++.|+.+|+|. +..+.
T Consensus 102 sedcl~l~v~~P~--~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~ 179 (544)
T 1thg_A 102 NEDCLYLNVFRPA--GTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITA 179 (544)
T ss_dssp CSCCCEEEEEEET--TCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH
T ss_pred CCCCeEEEEEeCC--CCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccc
Confidence 4577778777642 111234578999999965222 1222 2233 23333 39999999994 22111
Q ss_pred CCCccccHHHHHHHHHHHHHH---hC--CccEEEEEeccchHHHHHHHHhC--------CcccceEEEecCCC
Q 024042 97 TRSIQRTELFQAASLGKLLEK---IG--VERFSVVGTSYGGFVAYHMARMW--------PERVEKVVIASSGV 156 (273)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~---~~--~~~i~l~G~S~Gg~~a~~~a~~~--------~~~v~~~v~~~~~~ 156 (273)
.........++...+..+.+. ++ .++|.|+|+|.||.++..++... ...++++|+.++..
T Consensus 180 ~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 180 EGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred cCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 011223444555555444443 33 37899999999999888777652 45689999998743
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=9.8e-08 Score=78.03 Aligned_cols=122 Identities=12% Similarity=0.068 Sum_probs=72.5
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCC---chhHhH--HHHH-Hhhc--CCCeEEeecCCC----CCCCC---
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP---EAIWQW--RKQV-QFFA--PHFNVYVPDLIF----FGHST--- 96 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~---~~~~~~--~~~~-~~l~--~~~~v~~~d~~g----~g~s~--- 96 (273)
.+|...+..+... .....++.|+||++||.+. +. ..| ..++ ..+. .++.|+.+|+|. +..+.
T Consensus 94 sedcl~l~v~~P~--~~~~~~~~Pv~v~iHGGg~~~g~~-~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~ 170 (534)
T 1llf_A 94 SEDCLTINVVRPP--GTKAGANLPVMLWIFGGGFEIGSP-TIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIK 170 (534)
T ss_dssp CSCCCEEEEEECT--TCCTTCCEEEEEEECCSTTTSCCG-GGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHH
T ss_pred CCCCeEEEEEECC--CCCCCCCceEEEEEeCCCcccCCC-cccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCccccc
Confidence 3467777777642 1112345689999999652 22 222 2233 2232 349999999993 22111
Q ss_pred -CCCccccHHHHHHHHHHHHHH---h--CCccEEEEEeccchHHHHHHHHhC--------CcccceEEEecCCC
Q 024042 97 -TRSIQRTELFQAASLGKLLEK---I--GVERFSVVGTSYGGFVAYHMARMW--------PERVEKVVIASSGV 156 (273)
Q Consensus 97 -~~~~~~~~~~~~~~~~~~~~~---~--~~~~i~l~G~S~Gg~~a~~~a~~~--------~~~v~~~v~~~~~~ 156 (273)
.........++...+..+.+. + +.++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 171 ~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 171 AEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 011223444544444444443 3 337899999999998777666553 45689999998754
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=4.9e-06 Score=62.00 Aligned_cols=128 Identities=13% Similarity=0.111 Sum_probs=88.3
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHh------------------hcCCCeEEeecC
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQF------------------FAPHFNVYVPDL 89 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~------------------l~~~~~v~~~d~ 89 (273)
-++++.++..+.||...++. .....|+||++-|.++++ ..+..+.+. +.+..+++.+|.
T Consensus 26 Gyv~v~~~~~lFywf~es~~--~p~~~Pl~lWlnGGPGcS-S~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~ 102 (300)
T 4az3_A 26 GYLKGSGSKHLHYWFVESQK--DPENSPVVLWLNGGPGCS-SLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLES 102 (300)
T ss_dssp EEEECSTTEEEEEEEECCSS--CTTTSCEEEEECCTTTBC-THHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEECC
T ss_pred eeeecCCCCeEEEEEEEcCC--CCCCCCEEEEECCCCcHH-HHHHHHhcCCCceecCCCccccccCccHHhhhcchhhcC
Confidence 46778788899999886432 245679999999998887 555433320 112357999997
Q ss_pred C-CCCCCCCCCc--cccHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHHhC----CcccceEEEecCC
Q 024042 90 I-FFGHSTTRSI--QRTELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMARMW----PERVEKVVIASSG 155 (273)
Q Consensus 90 ~-g~g~s~~~~~--~~~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~~~----~~~v~~~v~~~~~ 155 (273)
| |.|.|..... ..+..+.++++..+++.. ..++++|.|.|+||..+-.+|... .-.++++++-++.
T Consensus 103 PvGtGfSy~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~ 182 (300)
T 4az3_A 103 PAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 182 (300)
T ss_dssp STTSTTCEETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CCcccccccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCc
Confidence 7 7887764433 235555666666665532 347899999999999888877643 2247899988887
Q ss_pred CCC
Q 024042 156 VNM 158 (273)
Q Consensus 156 ~~~ 158 (273)
.+.
T Consensus 183 ~d~ 185 (300)
T 4az3_A 183 SSY 185 (300)
T ss_dssp SBH
T ss_pred cCH
Confidence 754
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=1.6e-08 Score=95.72 Aligned_cols=93 Identities=13% Similarity=0.146 Sum_probs=0.0
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC-CccEEEEEeccc
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG-VERFSVVGTSYG 131 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~G 131 (273)
.+++++++|+.++.. ..|..+...|. ..|+.+..+| .....++++.++.+.+.+.... ..++.++|||+|
T Consensus 2241 ~~~~Lfc~~~agG~~-~~y~~l~~~l~--~~v~~lq~pg------~~~~~~i~~la~~~~~~i~~~~p~gpy~L~G~S~G 2311 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSI-TVFHGLAAKLS--IPTYGLQCTG------AAPLDSIQSLASYYIECIRQVQPEGPYRIAGYSYG 2311 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccH-HHHHHHHHhhC--CcEEEEecCC------CCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEECHh
Confidence 457899999998888 88888888775 6778888876 1223466666666666665554 368999999999
Q ss_pred hHHHHHHHHhCCc---ccc---eEEEecC
Q 024042 132 GFVAYHMARMWPE---RVE---KVVIASS 154 (273)
Q Consensus 132 g~~a~~~a~~~~~---~v~---~~v~~~~ 154 (273)
|.+|..+|.+... .+. .++++++
T Consensus 2312 g~lA~evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2312 ACVAFEMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp -----------------------------
T ss_pred HHHHHHHHHHHHHcCCCCCccceEEEEeC
Confidence 9999999876532 233 5666665
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=3.7e-07 Score=75.37 Aligned_cols=121 Identities=19% Similarity=0.146 Sum_probs=72.2
Q ss_pred cCCcceEEeecCCccCC-CCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCC----CCCCCCC--CC
Q 024042 32 IDDETTLHFWGPKLEDD-HKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLI----FFGHSTT--RS 99 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~-~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~----g~g~s~~--~~ 99 (273)
.+|...+..+....... ....+.|+||++||.+ ++. ..+.. ..|++ ++.|+.+||| |+..+.. ..
T Consensus 108 sEdcL~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~-~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~~~ 184 (574)
T 3bix_A 108 SEDCLYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTG-NLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQAAK 184 (574)
T ss_dssp CSCCCEEEEEEEC--------CCEEEEEECCCSSSSSCCG-GGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSSSCC
T ss_pred CCcCCEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCC-CccCc--hhhhccCCEEEEEeCCcCcccccCcCCCCCCC
Confidence 35777777776531000 0123568999999965 222 22322 22332 4999999999 3333221 12
Q ss_pred ccccHHHHHHHHHHHHHH---hC--CccEEEEEeccchHHHHHHHHhCC---cccceEEEecCC
Q 024042 100 IQRTELFQAASLGKLLEK---IG--VERFSVVGTSYGGFVAYHMARMWP---ERVEKVVIASSG 155 (273)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~---~~--~~~i~l~G~S~Gg~~a~~~a~~~~---~~v~~~v~~~~~ 155 (273)
....+.++...+..+.+. ++ .++|.|+|+|.||.++..++.... ..+.++|+.++.
T Consensus 185 ~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 185 GNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp CCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 234455555555554444 33 368999999999999988886543 447888887754
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=3.9e-06 Score=67.50 Aligned_cols=104 Identities=19% Similarity=0.187 Sum_probs=74.0
Q ss_pred CCCeEEEEcCCCCchhHhHH--HHHHhhcCC--CeEEeecCCCCCCCCCCCc---------cccHHHHHHHHHHHHHHh-
Q 024042 53 KKPSLVLIHGFGPEAIWQWR--KQVQFFAPH--FNVYVPDLIFFGHSTTRSI---------QRTELFQAASLGKLLEKI- 118 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~--~~~~~l~~~--~~v~~~d~~g~g~s~~~~~---------~~~~~~~~~~~~~~~~~~- 118 (273)
++|++|++.|= ++....+. .+...+++. -.++.++.|-+|.|.+... ..+.++..+|+..+++.+
T Consensus 42 ~gPIfl~~gGE-g~~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k 120 (472)
T 4ebb_A 42 EGPIFFYTGNE-GDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALR 120 (472)
T ss_dssp TCCEEEEECCS-SCHHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCC-ccccccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHH
Confidence 46766666553 33211111 122234433 6889999999999986321 137777888888888765
Q ss_pred ---CC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCC
Q 024042 119 ---GV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 119 ---~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
+. .|++++|-|+||.+|..+-.++|+.+.+.+..+++..
T Consensus 121 ~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv~ 164 (472)
T 4ebb_A 121 RDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVL 164 (472)
T ss_dssp HHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred hhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccceE
Confidence 22 5899999999999999999999999999998887654
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=1.7e-07 Score=77.48 Aligned_cols=105 Identities=20% Similarity=0.062 Sum_probs=63.8
Q ss_pred CCCCeEEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCC----CCCCCC---------CCCccccHHHHHHHHHH
Q 024042 52 LKKPSLVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLI----FFGHST---------TRSIQRTELFQAASLGK 113 (273)
Q Consensus 52 ~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~----g~g~s~---------~~~~~~~~~~~~~~~~~ 113 (273)
++.|+||++||.+ ++. .........|.+ ++.|+.+|+| |+.... .......+.++...+..
T Consensus 139 ~~~PV~v~iHGGg~~~g~~-~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~w 217 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSA-TLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 217 (585)
T ss_dssp SSEEEEEEECCSTTTCCCT-TCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcccCCCC-CCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHH
Confidence 4568999999954 222 111111233332 4999999999 443321 11122344454444444
Q ss_pred HHHH---hC--CccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCC
Q 024042 114 LLEK---IG--VERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVN 157 (273)
Q Consensus 114 ~~~~---~~--~~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~ 157 (273)
+.+. ++ .++|.|+|+|.||..+..++... ...++++|+.++...
T Consensus 218 v~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~~ 268 (585)
T 1dx4_A 218 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 268 (585)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhccccC
Confidence 4333 33 36899999999999887777653 356899999887643
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=98.40 E-value=6.1e-07 Score=73.95 Aligned_cols=125 Identities=14% Similarity=0.026 Sum_probs=72.9
Q ss_pred ecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchh--HhH------HHHHHhhc-C-CCeEEeecCC----CCCCCC
Q 024042 31 DIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI--WQW------RKQVQFFA-P-HFNVYVPDLI----FFGHST 96 (273)
Q Consensus 31 ~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~--~~~------~~~~~~l~-~-~~~v~~~d~~----g~g~s~ 96 (273)
..+|...+..+..... .....+.|+||++||.+.... ... ......|+ + ++.|+.++|| |+..+.
T Consensus 76 ~sedcl~lnv~~P~~~-~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~ 154 (579)
T 2bce_A 76 GNEDCLYLNIWVPQGR-KEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTG 154 (579)
T ss_dssp SCSCCCEEEEEEEECS-SSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCS
T ss_pred CCCCCCEEEEEECCCC-CCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCC
Confidence 3457777777754210 012345789999999752210 100 00112232 2 4999999999 444332
Q ss_pred C--CCccccHHHHHHHHHHHHHH---hC--CccEEEEEeccchHHHHHHHHh--CCcccceEEEecCCC
Q 024042 97 T--RSIQRTELFQAASLGKLLEK---IG--VERFSVVGTSYGGFVAYHMARM--WPERVEKVVIASSGV 156 (273)
Q Consensus 97 ~--~~~~~~~~~~~~~~~~~~~~---~~--~~~i~l~G~S~Gg~~a~~~a~~--~~~~v~~~v~~~~~~ 156 (273)
. .+......++...+..+.+. ++ .++|.|+|+|.||.++..++.. ....++++|+.++..
T Consensus 155 ~~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 155 DSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp STTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred CCCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 1 12223455555555444443 33 3689999999999999887764 345688999887643
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.07 E-value=0.00013 Score=53.61 Aligned_cols=128 Identities=15% Similarity=0.131 Sum_probs=79.1
Q ss_pred eEEecC--CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH-HHHHH------------------hhcCCCeEEe
Q 024042 28 QTIDID--DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW-RKQVQ------------------FFAPHFNVYV 86 (273)
Q Consensus 28 ~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-~~~~~------------------~l~~~~~v~~ 86 (273)
-++++. .|..+.||.+.+. .....++|++|+++|.++++ ..+ ..+.+ .+.+..+++.
T Consensus 27 Gyv~v~~~~~~~lFywf~es~-~~~p~~~Pl~lWlnGGPGcS-S~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllf 104 (270)
T 1gxs_A 27 GYVTIDDNNGRALYYWFQEAD-TADPAAAPLVLWLNGGPGCS-SIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILF 104 (270)
T ss_dssp EEEEEETTTTEEEEEEEECCC-SSCGGGSCEEEEEECTTTBC-TTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEEE
T ss_pred EEEEcCCCCCcEEEEEEEEec-CCCCCCCCEEEEecCCCccc-chhhhhHHhccCceecCCCCcceeCccchhccccEEE
Confidence 355553 4678998887531 12235689999999998887 553 43331 0223368999
Q ss_pred ecC-CCCCCCCCCCcc---ccHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHH---hC----Ccccce
Q 024042 87 PDL-IFFGHSTTRSIQ---RTELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMAR---MW----PERVEK 148 (273)
Q Consensus 87 ~d~-~g~g~s~~~~~~---~~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~---~~----~~~v~~ 148 (273)
+|. .|.|.|...... .+....++++..+++.. ..++++|.|.| |-.+...+.. .. .-.+++
T Consensus 105 iDqPvGtGfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLkG 183 (270)
T 1gxs_A 105 AESPAGVGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQG 183 (270)
T ss_dssp ECCSTTSTTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEEE
T ss_pred EeccccccccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeeee
Confidence 996 599988644321 23444566655555432 34689999999 6544433322 11 134789
Q ss_pred EEEecCCCCC
Q 024042 149 VVIASSGVNM 158 (273)
Q Consensus 149 ~v~~~~~~~~ 158 (273)
+++.++..+.
T Consensus 184 i~ign~~~d~ 193 (270)
T 1gxs_A 184 LLVSSGLTND 193 (270)
T ss_dssp EEEESCCCBH
T ss_pred EEEeCCccCh
Confidence 9999987764
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=2.9e-05 Score=57.66 Aligned_cols=94 Identities=14% Similarity=0.064 Sum_probs=52.8
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEe-ecCCCCCCCCCCCcc-ccHHHHHHHHHHHHHHh----CCccEE
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYV-PDLIFFGHSTTRSIQ-RTELFQAASLGKLLEKI----GVERFS 124 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~-~d~~g~g~s~~~~~~-~~~~~~~~~~~~~~~~~----~~~~i~ 124 (273)
..+..||.+||... . .+.+... +.+.. .|.++. ....... .......+++...++.+ ...+++
T Consensus 72 ~~~~iVva~RGT~~-~-------~d~l~d~~~~~~~~~~~~~~--~~vh~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 141 (269)
T 1tib_A 72 TNKLIVLSFRGSRS-I-------ENWIGNLNFDLKEINDICSG--CRGHDGFTSSWRSVADTLRQKVEDAVREHPDYRVV 141 (269)
T ss_dssp TTTEEEEEECCCSC-T-------HHHHTCCCCCEEECTTTSTT--CEEEHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCCEEEEEEeCCCC-H-------HHHHHhcCeeeeecCCCCCC--CEecHHHHHHHHHHHHHHHHHHHHHHHHCCCceEE
Confidence 35668899999753 2 2333333 55555 455431 1101111 12333444555555443 345899
Q ss_pred EEEeccchHHHHHHHHhCCc---ccceEEEecCC
Q 024042 125 VVGTSYGGFVAYHMARMWPE---RVEKVVIASSG 155 (273)
Q Consensus 125 l~G~S~Gg~~a~~~a~~~~~---~v~~~v~~~~~ 155 (273)
+.||||||.+|..++..... .+..+.+-+|.
T Consensus 142 l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~ 175 (269)
T 1tib_A 142 FTGHSLGGALATVAGADLRGNGYDIDVFSYGAPR 175 (269)
T ss_dssp EEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCC
T ss_pred EecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCC
Confidence 99999999999999987643 25544444443
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.93 E-value=8.2e-05 Score=55.29 Aligned_cols=62 Identities=13% Similarity=-0.050 Sum_probs=35.9
Q ss_pred CCeEEeecCCCCCCCCCCCc-cccHHHHHHHHHHHHHHh----CCccEEEEEeccchHHHHHHHHhC
Q 024042 81 HFNVYVPDLIFFGHSTTRSI-QRTELFQAASLGKLLEKI----GVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 81 ~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
+..+...++||......... ........+++...++.+ ...++++.|||+||.+|..++...
T Consensus 91 d~~~~~~~~p~~~~~~vh~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCEEcHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 45566667776321111111 113333444444444433 335699999999999999988765
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=97.91 E-value=9.5e-05 Score=53.76 Aligned_cols=102 Identities=17% Similarity=0.101 Sum_probs=64.0
Q ss_pred CCCeEEEEcCCCCchh---HhHHHHHHhhcCCCeEEeec-CCCCCCCCCCCccccHHHHHHHHHHHHHHh----CCccEE
Q 024042 53 KKPSLVLIHGFGPEAI---WQWRKQVQFFAPHFNVYVPD-LIFFGHSTTRSIQRTELFQAASLGKLLEKI----GVERFS 124 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~---~~~~~~~~~l~~~~~v~~~d-~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~ 124 (273)
++|+||+.+|.+.... .....+.+.|...+..-.++ ||-... + ...+..+-++++...++.. ...+++
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~~~~q~Vg~YpA~~~---~-y~~S~~~G~~~~~~~i~~~~~~CP~tkiV 77 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDIYRWQPIGNYPAAAF---P-MWPSVEKGVAELILQIELKLDADPYADFA 77 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTTSEEEECCSCCCCSS---S-CHHHHHHHHHHHHHHHHHHHHHCTTCCEE
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCccc---C-ccchHHHHHHHHHHHHHHHHhhCCCCeEE
Confidence 5799999999866420 12456777776666666563 653221 1 1113333344444444433 447899
Q ss_pred EEEeccchHHHHHHHHh-----------CCcccceEEEecCCCCC
Q 024042 125 VVGTSYGGFVAYHMARM-----------WPERVEKVVIASSGVNM 158 (273)
Q Consensus 125 l~G~S~Gg~~a~~~a~~-----------~~~~v~~~v~~~~~~~~ 158 (273)
|.|+|.|+.++..++.. ..++|.++++++-+...
T Consensus 78 L~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r~ 122 (254)
T 3hc7_A 78 MAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMRQ 122 (254)
T ss_dssp EEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTCC
T ss_pred EEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCCC
Confidence 99999999999887755 23578899988765443
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.80 E-value=4.4e-05 Score=51.31 Aligned_cols=59 Identities=24% Similarity=0.376 Sum_probs=53.1
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhc-----------------------CCcEEEEeCCCCCCcCcCChhhHHHHHHHHh
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLG-----------------------KKARLEIIENTSHVPQIENPGLFNSIVKNFL 269 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 269 (273)
++|+.+|+.|.+++.-..+.+.+.++ .+.++..+.++||+...++|+...+.+..||
T Consensus 66 rvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~fl 145 (153)
T 1whs_B 66 RIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQYFL 145 (153)
T ss_dssp EEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHHHH
T ss_pred eEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHHHH
Confidence 89999999999999999999888872 2678889999999999999999999999999
Q ss_pred cc
Q 024042 270 RG 271 (273)
Q Consensus 270 ~~ 271 (273)
..
T Consensus 146 ~~ 147 (153)
T 1whs_B 146 QG 147 (153)
T ss_dssp HT
T ss_pred CC
Confidence 64
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00033 Score=52.30 Aligned_cols=25 Identities=32% Similarity=0.187 Sum_probs=21.3
Q ss_pred CCccEEEEEeccchHHHHHHHHhCC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWP 143 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~ 143 (273)
...++++.|||+||.+|..++....
T Consensus 135 p~~~i~vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 135 PNYELVVVGHSLGAAVATLAATDLR 159 (279)
T ss_pred CCCeEEEEecCHHHHHHHHHHHHHH
Confidence 4468999999999999999988753
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00088 Score=45.11 Aligned_cols=59 Identities=17% Similarity=0.223 Sum_probs=50.6
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhc----------------------------CCcEEEEeCCCCCCcCcCChhhHHHH
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLG----------------------------KKARLEIIENTSHVPQIENPGLFNSI 264 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~gH~~~~~~~~~~~~~ 264 (273)
++|+.+|+.|.+++.-..+.+.+.+. .+.++..+.++||+...++|+...+.
T Consensus 65 rVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m 144 (155)
T 4az3_B 65 QILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFTM 144 (155)
T ss_dssp EEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHHHHH
T ss_pred eEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHHHHH
Confidence 89999999999999988888887761 12346678899999999999999999
Q ss_pred HHHHhcc
Q 024042 265 VKNFLRG 271 (273)
Q Consensus 265 i~~fl~~ 271 (273)
+.+||..
T Consensus 145 ~~~fl~g 151 (155)
T 4az3_B 145 FSRFLNK 151 (155)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9999974
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00096 Score=49.49 Aligned_cols=26 Identities=23% Similarity=0.134 Sum_probs=21.5
Q ss_pred HhCCccEEEEEeccchHHHHHHHHhC
Q 024042 117 KIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 117 ~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.....++++.|||+||.+|..++...
T Consensus 133 ~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 133 AHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HCCCCeEEEeccChHHHHHHHHHHHH
Confidence 33446899999999999999988765
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=97.10 E-value=0.011 Score=41.09 Aligned_cols=102 Identities=8% Similarity=-0.106 Sum_probs=59.3
Q ss_pred eEEEEcCCCCch-----hH-hHHHHHHhhcCC-CeEEee--cCCCCCCCC---CCCccccHHHHHHHHHHHHHHhCCccE
Q 024042 56 SLVLIHGFGPEA-----IW-QWRKQVQFFAPH-FNVYVP--DLIFFGHST---TRSIQRTELFQAASLGKLLEKIGVERF 123 (273)
Q Consensus 56 ~vi~~hG~~~~~-----~~-~~~~~~~~l~~~-~~v~~~--d~~g~g~s~---~~~~~~~~~~~~~~~~~~~~~~~~~~i 123 (273)
.||+.-|-+... .. ....+...+... ..|..+ +||-.-... .........+..+.+......-...++
T Consensus 20 ~vi~ARGT~E~~~~G~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tki 99 (197)
T 3qpa_A 20 IFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATL 99 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEEeeCCCCCCCCCcccHHHHHHHHHhcCCCceEEEeeCCCCcCCCCcccCccccHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 566666644321 01 223344455433 677888 787322110 001112233344444444444455899
Q ss_pred EEEEeccchHHHHHHHHhCC----cccceEEEecCCCC
Q 024042 124 SVVGTSYGGFVAYHMARMWP----ERVEKVVIASSGVN 157 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~~~----~~v~~~v~~~~~~~ 157 (273)
+|+|+|.|+.++..++...| ++|.++++++-+..
T Consensus 100 VL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~~ 137 (197)
T 3qpa_A 100 IAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYTKN 137 (197)
T ss_dssp EEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTTT
T ss_pred EEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCCcc
Confidence 99999999999988877665 67999999886543
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0012 Score=48.68 Aligned_cols=42 Identities=17% Similarity=0.121 Sum_probs=27.8
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhCC---cccceEEEecCC
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWP---ERVEKVVIASSG 155 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~---~~v~~~v~~~~~ 155 (273)
.+++.....++++.|||+||.+|..++.... .++. ++..+++
T Consensus 117 ~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~P 161 (261)
T 1uwc_A 117 QQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGEP 161 (261)
T ss_dssp HHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESCC
T ss_pred HHHHHCCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecCC
Confidence 3333334468999999999999998887642 2354 4444443
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0031 Score=46.96 Aligned_cols=48 Identities=17% Similarity=0.132 Sum_probs=31.6
Q ss_pred HHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC----CcccceEEEecCCC
Q 024042 109 ASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW----PERVEKVVIASSGV 156 (273)
Q Consensus 109 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~~~v~~~v~~~~~~ 156 (273)
+.+..+++.....++.+.|||+||.+|..++... +.....++..+++.
T Consensus 126 ~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~Pr 177 (279)
T 3uue_A 126 TAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLPR 177 (279)
T ss_dssp HHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCCC
T ss_pred HHHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCCC
Confidence 3344445555567899999999999999888653 33344455555443
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0038 Score=44.14 Aligned_cols=102 Identities=9% Similarity=-0.026 Sum_probs=54.5
Q ss_pred eEEEEcCCCCchh-HhHHHHHHhhcCC---CeEEeecCCCC-CCCCCCCccc--cHHHHHHHHHHHHHHh----CCccEE
Q 024042 56 SLVLIHGFGPEAI-WQWRKQVQFFAPH---FNVYVPDLIFF-GHSTTRSIQR--TELFQAASLGKLLEKI----GVERFS 124 (273)
Q Consensus 56 ~vi~~hG~~~~~~-~~~~~~~~~l~~~---~~v~~~d~~g~-g~s~~~~~~~--~~~~~~~~~~~~~~~~----~~~~i~ 124 (273)
.||+..|.+.... .....+...|.++ -.+..++||-. |.+......+ +..+=++++...++.. ...+++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T 1qoz_A 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEEecCCCCCCCCcchHHHHHHHHhcCCCceEEeeccccccccccCCccccccHHHHHHHHHHHHHHHHhhCCCCcEE
Confidence 4566666443220 0112333333332 25777888853 2211111112 2223334444444433 457899
Q ss_pred EEEeccchHHHHHHHHh--------------CC----cccceEEEecCCCC
Q 024042 125 VVGTSYGGFVAYHMARM--------------WP----ERVEKVVIASSGVN 157 (273)
Q Consensus 125 l~G~S~Gg~~a~~~a~~--------------~~----~~v~~~v~~~~~~~ 157 (273)
|.|+|.|+.++..++.. .| ++|.++++++-+..
T Consensus 86 l~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1qoz_A 86 LVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPRN 136 (207)
T ss_dssp EEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTTC
T ss_pred EEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCCcc
Confidence 99999999999888741 12 46888888876544
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0038 Score=44.15 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=45.0
Q ss_pred CeEEeecCCCC-CCCCCCCccc--cHHHHHHHHHHHHHHh----CCccEEEEEeccchHHHHHHHHh-------------
Q 024042 82 FNVYVPDLIFF-GHSTTRSIQR--TELFQAASLGKLLEKI----GVERFSVVGTSYGGFVAYHMARM------------- 141 (273)
Q Consensus 82 ~~v~~~d~~g~-g~s~~~~~~~--~~~~~~~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~------------- 141 (273)
-.+..++||-. |.+......+ +..+-++++...++.. ...+++|.|+|.|+.++..++..
T Consensus 36 ~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~ 115 (207)
T 1g66_A 36 STAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAV 115 (207)
T ss_dssp CEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSC
T ss_pred CceEEeeccccccccccCCcchhhhHHHHHHHHHHHHHHHHHhCCCCcEEEEeeCchHHHHHHHHhcccccccccccCCC
Confidence 36777888853 2211111112 2233344444444433 45789999999999999888741
Q ss_pred -CC----cccceEEEecCCCC
Q 024042 142 -WP----ERVEKVVIASSGVN 157 (273)
Q Consensus 142 -~~----~~v~~~v~~~~~~~ 157 (273)
.| ++|.++++++-+..
T Consensus 116 ~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1g66_A 116 QLSSSAVNMVKAAIFMGDPMF 136 (207)
T ss_dssp CSCHHHHHHEEEEEEESCTTC
T ss_pred CCChhhhccEEEEEEEcCCCc
Confidence 22 46888888876544
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0017 Score=47.67 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=23.5
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHHh
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
+..+++.....++++.|||+||.+|..++..
T Consensus 114 l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 114 VKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 3444444455789999999999999988765
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.61 E-value=0.003 Score=47.58 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=24.7
Q ss_pred HHHHHHHHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 110 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.+.++++.....++.+.|||+||.+|..++...
T Consensus 143 ~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 143 KLDSVIEQYPDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCceEEEeccChHHHHHHHHHHHH
Confidence 344444444557899999999999999888754
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0022 Score=48.59 Aligned_cols=24 Identities=29% Similarity=0.216 Sum_probs=20.1
Q ss_pred CCccEEEEEeccchHHHHHHHHhC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
...++++.|||+||.+|..++...
T Consensus 134 p~~~i~vtGHSLGGAlA~L~a~~l 157 (319)
T 3ngm_A 134 PSFKVVSVGHSLGGAVATLAGANL 157 (319)
T ss_dssp TTCEEEEEEETHHHHHHHHHHHHH
T ss_pred CCCceEEeecCHHHHHHHHHHHHH
Confidence 446899999999999999887653
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0054 Score=41.35 Aligned_cols=59 Identities=20% Similarity=0.354 Sum_probs=50.3
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhc------------C--------------CcEEEEeCCCCCCcCcCChhhHHHHHH
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLG------------K--------------KARLEIIENTSHVPQIENPGLFNSIVK 266 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~------------~--------------~~~~~~~~~~gH~~~~~~~~~~~~~i~ 266 (273)
++|+.+|+.|-+++.-..+.+.+.++ . +.++..+.++||+...++|+...+.+.
T Consensus 68 rVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m~~ 147 (158)
T 1gxs_B 68 RVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLLFK 147 (158)
T ss_dssp EEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHHHHH
T ss_pred eEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHHHHH
Confidence 89999999999999988888887661 1 245667889999999999999999999
Q ss_pred HHhcc
Q 024042 267 NFLRG 271 (273)
Q Consensus 267 ~fl~~ 271 (273)
+||..
T Consensus 148 ~fl~g 152 (158)
T 1gxs_B 148 QFLKG 152 (158)
T ss_dssp HHHHT
T ss_pred HHHcC
Confidence 99974
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.029 Score=39.18 Aligned_cols=102 Identities=10% Similarity=-0.108 Sum_probs=58.6
Q ss_pred eEEEEcCCCCchh-------HhHHHHHHhhcCC-CeEEee--cCCCCCCCCC---CCccccHHHHHHHHHHHHHHhCCcc
Q 024042 56 SLVLIHGFGPEAI-------WQWRKQVQFFAPH-FNVYVP--DLIFFGHSTT---RSIQRTELFQAASLGKLLEKIGVER 122 (273)
Q Consensus 56 ~vi~~hG~~~~~~-------~~~~~~~~~l~~~-~~v~~~--d~~g~g~s~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (273)
.|||..|.+.... .....+...+... ..|..+ +||-.-.... ........+..+.+......-...+
T Consensus 27 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tk 106 (201)
T 3dcn_A 27 IYIFARASTEPGNMGISAGPIVADALERIYGANDVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAA 106 (201)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHHCGGGEEEEECCTTCCCCSGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTSE
T ss_pred EEEEecCCCCCCCCCccccHHHHHHHHHhcCCCceEEEEeCCCccccCCcccccCCCHHHHHHHHHHHHHHHHHhCCCCc
Confidence 5677777543320 1222333444323 668888 6773211000 0111233344444444444445589
Q ss_pred EEEEEeccchHHHHHHHHhCC----cccceEEEecCCCC
Q 024042 123 FSVVGTSYGGFVAYHMARMWP----ERVEKVVIASSGVN 157 (273)
Q Consensus 123 i~l~G~S~Gg~~a~~~a~~~~----~~v~~~v~~~~~~~ 157 (273)
++|+|+|.|+.++..++...| ++|.++++++-+..
T Consensus 107 iVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~~ 145 (201)
T 3dcn_A 107 IVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYTKN 145 (201)
T ss_dssp EEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCTTT
T ss_pred EEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCccc
Confidence 999999999999988876655 57889999886543
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.049 Score=37.61 Aligned_cols=85 Identities=11% Similarity=-0.058 Sum_probs=49.9
Q ss_pred HHHHHhhcCCCeEEeec--CCCCCCCCCC---CccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCC---
Q 024042 72 RKQVQFFAPHFNVYVPD--LIFFGHSTTR---SIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWP--- 143 (273)
Q Consensus 72 ~~~~~~l~~~~~v~~~d--~~g~g~s~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--- 143 (273)
..+...+.....|..++ ||-.-..... .......+....+....+.-...+++|+|+|.|+.++..++...|
T Consensus 39 ~~L~~~~~~~v~v~~V~~~YpA~~~~~~~~~~s~~~g~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~ 118 (187)
T 3qpd_A 39 NRLKLARSGDVACQGVGPRYTADLPSNALPEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADV 118 (187)
T ss_dssp HHHHHHSTTCEEEEECCSSCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHH
T ss_pred HHHHHHcCCCceEEeeCCcccCcCccccccccchhHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhh
Confidence 34444553336788888 7732110000 001112222233333334445589999999999999988876655
Q ss_pred -cccceEEEecCCC
Q 024042 144 -ERVEKVVIASSGV 156 (273)
Q Consensus 144 -~~v~~~v~~~~~~ 156 (273)
++|.++++++-+.
T Consensus 119 ~~~V~avvlfGdP~ 132 (187)
T 3qpd_A 119 QDKIKGVVLFGYTR 132 (187)
T ss_dssp HHHEEEEEEESCTT
T ss_pred hhhEEEEEEeeCCc
Confidence 4689999987654
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.04 Score=41.30 Aligned_cols=86 Identities=16% Similarity=0.222 Sum_probs=51.0
Q ss_pred HHHHHhhcCC-CeEEeecCCCCCCCC---CCCccc--cHHHHHHHHHHHHHHh----CCccEEEEEeccchHHHHHHHHh
Q 024042 72 RKQVQFFAPH-FNVYVPDLIFFGHST---TRSIQR--TELFQAASLGKLLEKI----GVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 72 ~~~~~~l~~~-~~v~~~d~~g~g~s~---~~~~~~--~~~~~~~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..+...+... ..++.++|+-.-... .....| +..+=++++...++.. ...+++|+|+|.|+.++..++..
T Consensus 74 ~~L~~~~~g~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~ 153 (302)
T 3aja_A 74 KPLAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASD 153 (302)
T ss_dssp HHHHHHSCTTTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHh
Confidence 3444455433 667888887542210 000111 2333344444444433 44799999999999999887743
Q ss_pred --------CCcccceEEEecCCCC
Q 024042 142 --------WPERVEKVVIASSGVN 157 (273)
Q Consensus 142 --------~~~~v~~~v~~~~~~~ 157 (273)
.+++|.++++++-+..
T Consensus 154 i~~g~~~~~~~~V~aVvLfGdP~r 177 (302)
T 3aja_A 154 IGNGRGPVDEDLVLGVTLIADGRR 177 (302)
T ss_dssp HHTTCSSSCGGGEEEEEEESCTTC
T ss_pred ccCCCCCCChHHEEEEEEEeCCCC
Confidence 2467999999886544
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.036 Score=39.02 Aligned_cols=95 Identities=13% Similarity=0.015 Sum_probs=53.8
Q ss_pred eEEEEcCCCCchh--HhHHHHHHh-hcCC--CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH----hCCccEEEE
Q 024042 56 SLVLIHGFGPEAI--WQWRKQVQF-FAPH--FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK----IGVERFSVV 126 (273)
Q Consensus 56 ~vi~~hG~~~~~~--~~~~~~~~~-l~~~--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~ 126 (273)
.||+..|.+.... .....+... |.+. -....++||-.-. . . + .+-++++...++. -...+++|+
T Consensus 10 ~vi~ARGT~E~~~~G~~g~~~~~~vl~~~~g~~~~~V~YpA~~~----y-~-S-~~G~~~~~~~i~~~~~~CP~tkivl~ 82 (205)
T 2czq_A 10 VLINTRGTGEPQGQSAGFRTMNSQITAALSGGTIYNTVYTADFS----Q-N-S-AAGTADIIRRINSGLAANPNVCYILQ 82 (205)
T ss_dssp EEEEECCTTCCSSSCTTTHHHHHHHHHHSSSEEEEECCSCCCTT----C-C-C-HHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred EEEEecCCCCCCCCCcccHHHHHHHHHhccCCCceeecccccCC----C-c-C-HHHHHHHHHHHHHHHhhCCCCcEEEE
Confidence 4566666443220 112344444 4333 2346667763211 0 1 2 3334444444443 345789999
Q ss_pred EeccchHHHHHHHHhC--C----cccceEEEecCCCC
Q 024042 127 GTSYGGFVAYHMARMW--P----ERVEKVVIASSGVN 157 (273)
Q Consensus 127 G~S~Gg~~a~~~a~~~--~----~~v~~~v~~~~~~~ 157 (273)
|+|.|+.++..++... + ++|.++++++-+..
T Consensus 83 GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP~~ 119 (205)
T 2czq_A 83 GYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNPDH 119 (205)
T ss_dssp EETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCTTC
T ss_pred eeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCCCc
Confidence 9999999998877654 3 46899999885543
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.15 E-value=0.05 Score=43.53 Aligned_cols=60 Identities=17% Similarity=0.200 Sum_probs=51.0
Q ss_pred ccEEEEecCCCCCCChHHHHHHHHHhc--------------C--------------CcEEEEeCCCCCCcCcCChhhHHH
Q 024042 212 HDVLIVWGDQDQIFPLKMATELKELLG--------------K--------------KARLEIIENTSHVPQIENPGLFNS 263 (273)
Q Consensus 212 ~p~l~i~g~~D~~~~~~~~~~~~~~~~--------------~--------------~~~~~~~~~~gH~~~~~~~~~~~~ 263 (273)
.++||.+|+.|-+++.-..+.+.+.++ . +.++..+.++||+...++|+...+
T Consensus 362 irVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~al~ 441 (452)
T 1ivy_A 362 YQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFT 441 (452)
T ss_dssp CEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHHHH
T ss_pred ceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHHHHH
Confidence 489999999999999998888888762 0 234567889999999999999999
Q ss_pred HHHHHhcc
Q 024042 264 IVKNFLRG 271 (273)
Q Consensus 264 ~i~~fl~~ 271 (273)
.+..||..
T Consensus 442 m~~~fl~g 449 (452)
T 1ivy_A 442 MFSRFLNK 449 (452)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcC
Confidence 99999974
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=94.48 E-value=0.028 Score=43.21 Aligned_cols=22 Identities=27% Similarity=0.388 Sum_probs=19.3
Q ss_pred CccEEEEEeccchHHHHHHHHh
Q 024042 120 VERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 120 ~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..++++.|||+||.+|..++..
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHH
Confidence 3689999999999999988865
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=92.99 E-value=0.01 Score=46.49 Aligned_cols=35 Identities=29% Similarity=0.314 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC
Q 024042 108 AASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 108 ~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.+.+..+++.... .++++.|||+||.+|..++...
T Consensus 213 l~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 213 LREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 3344444444432 4799999999999999888654
|
| >4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A | Back alignment and structure |
|---|
Probab=86.11 E-value=0.66 Score=36.53 Aligned_cols=30 Identities=23% Similarity=0.367 Sum_probs=24.4
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHH
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
+.++++..+.++-.++|||.|=..|..++.
T Consensus 158 l~~ll~~~Gv~P~~v~GHS~GE~aAa~~AG 187 (401)
T 4amm_A 158 GIRWLDRLGARPVGALGHSLGELAALSWAG 187 (401)
T ss_dssp HHHHHHHHTCCCSEEEECTTHHHHHHHHTT
T ss_pred HHHHHHHcCCCCCEEEECCHHHHHHHHHhC
Confidence 456667789999999999999988877654
|
| >2qub_A Extracellular lipase; beta roll, alpha/beta hydrolase, helical hairpin, hydrolase; 1.80A {Serratia marcescens} PDB: 2qua_A | Back alignment and structure |
|---|
Probab=81.58 E-value=2.5 Score=35.01 Aligned_cols=37 Identities=27% Similarity=0.342 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC
Q 024042 106 FQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 106 ~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.+..++.++.++.+. +.|.+-|||+||..+-.+|...
T Consensus 184 ~ll~~v~~~a~a~gl~g~dv~vsghslgg~~~n~~a~~~ 222 (615)
T 2qub_A 184 NLLGDVAKFAQAHGLSGEDVVVSGHSLGGLAVNSMAAQS 222 (615)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCcEEEeccccchhhhhHHHHhh
Confidence 344455555555555 5899999999999998887754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 273 | ||||
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 5e-20 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 2e-19 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 4e-19 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 1e-18 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 4e-17 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 6e-17 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 2e-16 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 2e-16 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 1e-15 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 2e-15 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 2e-15 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 2e-14 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 3e-14 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 3e-14 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 3e-14 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 7e-14 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 9e-14 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 3e-13 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 1e-12 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 2e-12 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 5e-12 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 6e-12 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 6e-12 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 1e-11 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 3e-11 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 3e-11 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 2e-07 | |
| d2h7xa1 | 283 | c.69.1.22 (A:9-291) Picromycin polyketide synthase | 4e-11 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 9e-11 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 2e-05 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 2e-10 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 1e-08 | |
| d1jmkc_ | 230 | c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillu | 5e-10 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 2e-09 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 2e-09 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 2e-07 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 2e-08 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 3e-08 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 6e-08 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 1e-05 | |
| d2dsta1 | 122 | c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 | 2e-07 | |
| d1mo2a_ | 255 | c.69.1.22 (A:) Erythromycin polyketide synthase {S | 6e-07 | |
| d1ispa_ | 179 | c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: | 1e-06 | |
| d1uxoa_ | 186 | c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus | 2e-06 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 3e-06 | |
| d1r88a_ | 267 | c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tu | 3e-06 | |
| d1xkta_ | 286 | c.69.1.22 (A:) Fatty acid synthase {Human (Homo sa | 5e-06 | |
| d1ufoa_ | 238 | c.69.1.27 (A:) Hypothetical protein TT1662 {Thermu | 6e-06 | |
| d2d81a1 | 318 | c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymer | 2e-05 | |
| d1vkha_ | 263 | c.69.1.32 (A:) Putative serine hydrolase Ydr428c { | 4e-05 | |
| d3b5ea1 | 209 | c.69.1.14 (A:7-215) Uncharacterized protein Mll837 | 8e-05 | |
| d2r8ba1 | 203 | c.69.1.14 (A:44-246) Uncharacterized protein Atu24 | 8e-05 | |
| d1dqza_ | 280 | c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculo | 2e-04 | |
| d1qo7a_ | 394 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Asperg | 8e-04 | |
| d1vlqa_ | 322 | c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm | 0.002 |
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 84.9 bits (208), Expect = 5e-20
Identities = 53/247 (21%), Positives = 98/247 (39%), Gaps = 32/247 (12%)
Query: 55 PSLVLIHGFGP--EAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLG 112
++LIHG GP A WR + + + V PD++ FG +
Sbjct: 24 QPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHI 83
Query: 113 KL-LEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV---NMKRGDNEALVK 168
++ + +E+ +VG ++GG +A A + ERV+++V+ + ++ G N
Sbjct: 84 IGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGY 143
Query: 169 RANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDF------------------ 210
++E + +L+ + + LA + + F F
Sbjct: 144 TPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASS 203
Query: 211 -------VHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNS 263
++ LI+ G +DQ+ PL + L EL+ +A+L + H QIE FN
Sbjct: 204 DEDIKTLPNETLIIHGREDQVVPLSSSLRLGELI-DRAQLHVFGRCGHWTQIEQTDRFNR 262
Query: 264 IVKNFLR 270
+V F
Sbjct: 263 LVVEFFN 269
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 83.8 bits (205), Expect = 2e-19
Identities = 51/292 (17%), Positives = 89/292 (30%), Gaps = 58/292 (19%)
Query: 27 SQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNV 84
+++ +H+ GP+ ++ +HG P + + WR + AP
Sbjct: 9 PHYVEVLG-ERMHYVDVGPR--------DGTPVLFLHGN-PTSSYLWRNIIPHVAPSHRC 58
Query: 85 YVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE 144
PDLI G S + L +E +G+E +V +G + +H A+ PE
Sbjct: 59 IAPDLIGMGKSDKPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPE 118
Query: 145 RVEKVVIASSGVNMKRGDNEA--------------------------------------- 165
RV+ + + D
Sbjct: 119 RVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPL 178
Query: 166 ------LVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWG 219
+ L+ +D L +++ A L + + L+ WG
Sbjct: 179 TEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWG 238
Query: 220 DQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271
+ P A L E L + I H Q +NP L S + +L G
Sbjct: 239 TPGVLIPPAEAARLAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPG 289
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 82.7 bits (202), Expect = 4e-19
Identities = 44/255 (17%), Positives = 70/255 (27%), Gaps = 39/255 (15%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGK 113
+V HG+ P W Q+ F A + V D G S+ A L +
Sbjct: 20 QPIVFSHGW-PLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQ 78
Query: 114 LLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE 173
L+E + + + G S GG S V EA +E
Sbjct: 79 LIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPME 138
Query: 174 RIDHLMLPESASQLRTLTGLAVSKNLDIVPDFF--------------------------- 206
D + A + + LA
Sbjct: 139 VFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIK 198
Query: 207 ----------FNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE 256
L+V GD DQ+ P++ + L K + L+I H
Sbjct: 199 AFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDT 258
Query: 257 NPGLFNSIVKNFLRG 271
+ N+ + F++G
Sbjct: 259 HKDQLNADLLAFIKG 273
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 81.0 bits (198), Expect = 1e-18
Identities = 47/244 (19%), Positives = 85/244 (34%), Gaps = 30/244 (12%)
Query: 55 PSLVLIHGFG--PEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLG 112
++LIHG G E+ WR + A H+ V D++ FG + I+ T+ + L
Sbjct: 23 QPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLH 82
Query: 113 KLLEKI-GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG---------------- 155
++ + + S+VG S GG ++ + E V +V+ S
Sbjct: 83 DFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINY 142
Query: 156 ----------VNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDF 205
V D + R + + +
Sbjct: 143 DFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPE 202
Query: 206 FFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIV 265
F L+V G D++ P++ A + +L+ + II + H IE+P F +
Sbjct: 203 FIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI-DDSWGYIIPHCGHWAMIEHPEDFANAT 261
Query: 266 KNFL 269
+FL
Sbjct: 262 LSFL 265
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 76.4 bits (186), Expect = 4e-17
Identities = 49/249 (19%), Positives = 77/249 (30%), Gaps = 39/249 (15%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGK 113
LVL+HG+G A WR + + HF +++ DL FG S A L +
Sbjct: 11 NVHLVLLHGWGLNA-EVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQ 69
Query: 114 LLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE 173
+K +S GG VA +A PERV +V +S D +K L
Sbjct: 70 APDKAIWLGWS-----LGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLA 124
Query: 174 RIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVL------------------ 215
+ + + L D L
Sbjct: 125 GFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTV 184
Query: 216 --------------IVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLF 261
++G D + P K+ L +L + I +H P I +P F
Sbjct: 185 DLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEF 243
Query: 262 NSIVKNFLR 270
++ +
Sbjct: 244 CHLLVALKQ 252
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 76.5 bits (186), Expect = 6e-17
Identities = 59/257 (22%), Positives = 86/257 (33%), Gaps = 40/257 (15%)
Query: 53 KKPSLVLIHGFGP--EAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAAS 110
+ P++VL+HG GP A WR + A +F V PDLI FG S +
Sbjct: 25 QSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVG 84
Query: 111 L-----GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA 165
+ L+ G+E+ +VG S GG V + PER +KV + S
Sbjct: 85 MRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPE 144
Query: 166 LVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFF------------------ 207
L + L +IV F
Sbjct: 145 LARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESM 204
Query: 208 --------------NDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVP 253
HDVL+ G QD+I PL + L + L K A L +++ H
Sbjct: 205 KAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHL-KHAELVVLDRCGHWA 263
Query: 254 QIENPGLFNSIVKNFLR 270
Q+E ++ R
Sbjct: 264 QLERWDAMGPMLMEHFR 280
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 74.5 bits (181), Expect = 2e-16
Identities = 39/249 (15%), Positives = 65/249 (26%), Gaps = 39/249 (15%)
Query: 58 VLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTR--SIQRTELFQAASLGKL 114
VLIH A W W K V DL G + I + + L L
Sbjct: 6 VLIHTICHGA-WIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFL 64
Query: 115 LEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLER 174
E+ +VG S GG A + E++ V +S + +V +
Sbjct: 65 EALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVF 124
Query: 175 IDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDF------------------------ 210
D + ++ + +
Sbjct: 125 PDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAK 184
Query: 211 ----------VHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGL 260
+ VW DQD+IF + E ++ +E H Q+
Sbjct: 185 RPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK-PDKVYKVEGGDHKLQLTKTKE 243
Query: 261 FNSIVKNFL 269
I++
Sbjct: 244 IAEILQEVA 252
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.7 bits (182), Expect = 2e-16
Identities = 28/269 (10%), Positives = 65/269 (24%), Gaps = 56/269 (20%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFA---PHFNVYVPDLIFFGHSTTRSIQRTELFQAAS 110
++++HG + + +R +++ P V V DL S ++ + F
Sbjct: 2 YKPVIVVHGLFDSS-YSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGF--RE 58
Query: 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA 170
+ + ++ S GG V + + + I+ S M + + +K
Sbjct: 59 AVVPIMAKAPQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWL 118
Query: 171 NLERID---------------------------------HLMLPESASQLRTLTGLAVSK 197
+ L + K
Sbjct: 119 FPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRK 178
Query: 198 NLDIVPDFFFNDFVHD---------VLIVWGDQDQIFPLKMATELKELL--------GKK 240
N V D + + + ++
Sbjct: 179 NFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGA 238
Query: 241 ARLEIIENTSHVPQIENPGLFNSIVKNFL 269
+ SH N L+ + ++ +L
Sbjct: 239 IVRCPMAGISHTAWHSNRTLYETCIEPWL 267
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 73.3 bits (179), Expect = 1e-15
Identities = 32/166 (19%), Positives = 62/166 (37%), Gaps = 12/166 (7%)
Query: 47 DDHKTLKKPSLVLIHGFG-----PEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI 100
D + + P ++L+HG + W H VYV +L F +
Sbjct: 2 DTYAATRYP-VILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNG 60
Query: 101 QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR 160
+ +L A + ++L G + +++G S GG + ++A + P+ V V + R
Sbjct: 61 RGEQL--LAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGT---PHR 115
Query: 161 GDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFF 206
G A + L+ + + + G VS + + D
Sbjct: 116 GSEFADFVQDVLKTDPTGLSSTVIAAFVNVFGTLVSSSHNTDQDAL 161
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 72.6 bits (176), Expect = 2e-15
Identities = 48/254 (18%), Positives = 91/254 (35%), Gaps = 41/254 (16%)
Query: 55 PSLVLIHGFGPEAIW---QWRKQVQFFAPHFNVYVPDLI-FFGHSTTRSIQRTELFQAAS 110
+++++HG GP A +R F + V + D F ++ L A +
Sbjct: 31 ETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARA 90
Query: 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA 170
+ L++ + ++R +VG + GG A + A +P+R+ K+++ G A +
Sbjct: 91 VKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPG--GLGPSMFAPMPME 148
Query: 171 NLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFF------------------------ 206
++ + L S L+ + + + I +
Sbjct: 149 GIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKA 208
Query: 207 ----------FNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE 256
+ I WG D+ PL +L + ARL + H Q E
Sbjct: 209 PLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDARLHVFSKCGHWAQWE 267
Query: 257 NPGLFNSIVKNFLR 270
+ FN +V +FLR
Sbjct: 268 HADEFNRLVIDFLR 281
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 72.3 bits (175), Expect = 2e-15
Identities = 43/252 (17%), Positives = 84/252 (33%), Gaps = 37/252 (14%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGK 113
++ HG+ W Q+++ + + D FG S A + +
Sbjct: 20 KPVLFSHGWL-LDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQ 78
Query: 114 LLEKIGVERFSVV-GTSYGGFVAYHMARMWPERVEKVVIASSGVNM--KRGDNEALVKRA 170
L+E + ++ ++V + GG VA ++AR RV +V+ + + ++ D V
Sbjct: 79 LIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLD 138
Query: 171 NLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHD----------------- 213
R +L + A + N V
Sbjct: 139 VFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAF 198
Query: 214 ---------------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP 258
L++ GD DQI P + ++ L K A L++ ++ H + +
Sbjct: 199 AETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHA 258
Query: 259 GLFNSIVKNFLR 270
N + FL+
Sbjct: 259 QQLNEDLLAFLK 270
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 69.2 bits (167), Expect = 2e-14
Identities = 49/282 (17%), Positives = 79/282 (28%), Gaps = 49/282 (17%)
Query: 29 TIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVY 85
T+ D T + + WGP+ +V HG+ P + W Q+ FF H + V
Sbjct: 2 TVTTSDGTNIFYKDWGPR--------DGLPVVFHHGW-PLSADDWDNQMLFFLSHGYRVI 52
Query: 86 VPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPER 145
D G S S AA + L E + + +G S GG
Sbjct: 53 AHDRRGHGRSDQPSTGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPG 112
Query: 146 VEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPD- 204
+ S V ++ LE D +A++ + + +
Sbjct: 113 RVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREG 172
Query: 205 ------------------------------------FFFNDFVHDVLIVWGDQDQIFPLK 228
VL+ G DQ+ P
Sbjct: 173 ATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYA 232
Query: 229 MATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
A L A L+ E H +P + N + F++
Sbjct: 233 DAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 69.1 bits (167), Expect = 3e-14
Identities = 38/296 (12%), Positives = 80/296 (27%), Gaps = 67/296 (22%)
Query: 27 SQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNV 84
+ I+I + + G ++ HG P + + WR + A +
Sbjct: 10 KKFIEIKG-RRMAYIDEGTG----------DPILFQHGN-PTSSYLWRNIMPHCAGLGRL 57
Query: 85 YVPDLIFFGHSTTRSI-----QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMA 139
DLI G S + +R +V +G + + A
Sbjct: 58 IACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWA 117
Query: 140 RMWPERVEKVVIASSGVNMKRGDNEALVKRANLERI-----DHLMLPESASQLRTLTGLA 194
R ERV+ + + + R + + L+L ++ + L GL
Sbjct: 118 RRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLI 177
Query: 195 VSKNLDIVPDFFFNDFV----------------------------------------HDV 214
+ + + F+
Sbjct: 178 LRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPK 237
Query: 215 LIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
L + + + +M + + EI +H Q ++P + + F+R
Sbjct: 238 LFINAEPGALTTGRMRDFCRTWPNQT---EITVAGAHFIQEDSPDEIGAAIAAFVR 290
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 68.8 bits (166), Expect = 3e-14
Identities = 37/269 (13%), Positives = 57/269 (21%), Gaps = 51/269 (18%)
Query: 38 LHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFA-PHFNVYVPDL-IFFGHS 95
LHF P T + P +VL+HG + W+ + A DL +
Sbjct: 7 LHFAKP-------TARTPLVVLVHGLL-GSGADWQPVLSHLARTQCAALTLDLPGHGTNP 58
Query: 96 TTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG 155
E + +VG S GG + H + A
Sbjct: 59 ERHCDNFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIE 118
Query: 156 VNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV---- 211
L+ + +
Sbjct: 119 GGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRS 178
Query: 212 ------------------------------HDVLIVWGDQDQIFPLKMATELKELLGKKA 241
+ V G+QD F +L E G
Sbjct: 179 ANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESSG--L 231
Query: 242 RLEIIENTSHVPQIENPGLFNSIVKNFLR 270
+ H E P F IV+ +
Sbjct: 232 SYSQVAQAGHNVHHEQPQAFAKIVQAMIH 260
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 69.0 bits (168), Expect = 3e-14
Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 10/106 (9%)
Query: 54 KPSLVLIHGFG----PEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQA 108
K +VL HG + W VYV ++ S R Q
Sbjct: 7 KYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQ-----LL 61
Query: 109 ASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS 154
+ +++ G + +++G S+GG ++A + P+ + +
Sbjct: 62 QQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGA 107
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 68.0 bits (164), Expect = 7e-14
Identities = 50/307 (16%), Positives = 86/307 (28%), Gaps = 71/307 (23%)
Query: 26 SSQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQV--QFFAPH 81
S + + D L +G P+L+L+ G + W + +
Sbjct: 1 SERIVPSGD-VELWSDDFGDP--------ADPALLLVMGGN-LSALGWPDEFARRLADGG 50
Query: 82 FNVYVPDLIFFGHSTTRSIQR---TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHM 138
+V D G STTR AA +L+ GV+R VVG S G + +
Sbjct: 51 LHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVI 110
Query: 139 ARMWPERVEK-VVIASSGV----------------------NMKRGDNEALVKRANLERI 175
A +R+ ++ G+ ++ +AL
Sbjct: 111 ALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEG 170
Query: 176 DHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDF------------------------- 210
+ + S+ R L+G V + +
Sbjct: 171 RAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAA 230
Query: 211 -----VHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIV 265
L++ + D I P L L+ ARL I H G ++
Sbjct: 231 ELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGHALPSSVHGPLAEVI 289
Query: 266 KNFLRGS 272
R +
Sbjct: 290 LAHTRSA 296
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 66.8 bits (161), Expect = 9e-14
Identities = 34/229 (14%), Positives = 72/229 (31%), Gaps = 13/229 (5%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDL---IFFGHSTTRSIQRTELFQAA 109
+ +++L+HGF R +F + + P +
Sbjct: 11 ERAVLLLHGFT-GNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVM 69
Query: 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169
+ + L+ G E+ +V G S GG + + P + A + + E +++
Sbjct: 70 NGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIKSEETMYEGVLEY 129
Query: 170 ANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLI------VWGDQDQ 223
A + E Q K L + + + H LI V D+
Sbjct: 130 AREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDE 189
Query: 224 IFPLKMATELKELL-GKKARLEIIENTSHVPQIE-NPGLFNSIVKNFLR 270
+ A + + +++ E + HV ++ + + FL
Sbjct: 190 MINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLE 238
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 65.7 bits (158), Expect = 3e-13
Identities = 28/255 (10%), Positives = 64/255 (25%), Gaps = 41/255 (16%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHST--TRSIQRTELFQAASL 111
VL+HG W W K V DL G ++ + +
Sbjct: 3 KHFVLVHGACHGG-WSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLM 61
Query: 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRAN 171
+ E+ +VG S GG +P+++ V ++ + ++ ++++ N
Sbjct: 62 ELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYN 121
Query: 172 LERIDHLMLPESASQLRTL------------------------------------TGLAV 195
L + + L +
Sbjct: 122 ERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFM 181
Query: 196 SKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255
+ + +D+ P + + +G I+ H+ +
Sbjct: 182 EDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIG-VTEAIEIKGADHMAML 240
Query: 256 ENPGLFNSIVKNFLR 270
P + +
Sbjct: 241 CEPQKLCASLLEIAH 255
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 64.6 bits (155), Expect = 1e-12
Identities = 38/256 (14%), Positives = 65/256 (25%), Gaps = 41/256 (16%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQ-FFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGK 113
+VLIHG+ W +Q + A + V D FG S+ + AA L
Sbjct: 24 QPVVLIHGYP-LDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHT 82
Query: 114 LLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE 173
+LE + + +VG S G + + + + + + E
Sbjct: 83 VLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQE 142
Query: 174 RIDHLMLPESASQLRTLTGLA--------------------------------------- 194
D + + T
Sbjct: 143 VFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVP 202
Query: 195 VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQ 254
LI+ G +D I P+ +A +E H
Sbjct: 203 AWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLL 262
Query: 255 IENPGLFNSIVKNFLR 270
+ N+ +K FL
Sbjct: 263 WTHADEVNAALKTFLA 278
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 63.8 bits (153), Expect = 2e-12
Identities = 53/255 (20%), Positives = 87/255 (34%), Gaps = 40/255 (15%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGK 113
+V IHG+ W+ Q++ + D GHST A L
Sbjct: 20 RPVVFIHGWP-LNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLND 78
Query: 114 LLEKIGVERFSVVGTSYGGF-VAYHMARMWPERVEKVVIASS--GVNMKRGDNEALVKRA 170
LL + + ++V S GG +A ++ R R+ V+ S+ V +K N V
Sbjct: 79 LLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDE 138
Query: 171 NLERIDHLMLPESASQLRTLTGLAVSKNLD--------------------------IVPD 204
+ + + +L E + + S N V
Sbjct: 139 VFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDA 198
Query: 205 FFFNDFVHD-------VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI-- 255
F + DF D L+V GD DQ+ P+ + A L++ E +SH +
Sbjct: 199 FGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVP 258
Query: 256 ENPGLFNSIVKNFLR 270
+ FN + FL
Sbjct: 259 GDKEKFNRDLLEFLN 273
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 62.6 bits (151), Expect = 5e-12
Identities = 27/250 (10%), Positives = 84/250 (33%), Gaps = 13/250 (5%)
Query: 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYV 86
+ +++ LH W +++ K ++++ GF + + ++ + + F+V+
Sbjct: 7 HVLRVNNGQELHVWETPPKENVPF-KNNTILIASGFA-RRMDHFAGLAEYLSTNGFHVFR 64
Query: 87 PDLIFFGHSTTRSIQR----TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMA-RM 141
D + ++ SI T ++ L+ G + ++ S VAY + +
Sbjct: 65 YDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDL 124
Query: 142 WPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDI 201
+ V + + ++ + + + E + ++
Sbjct: 125 ELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWD 184
Query: 202 VPDFFFNDFVH---DVLIVWGDQDQIFPLKMATELKELL-GKKARLEIIENTSHVPQIEN 257
D + + ++ + D + ++ + +L + +SH EN
Sbjct: 185 TLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDL-GEN 243
Query: 258 PGLFNSIVKN 267
+ + ++
Sbjct: 244 LVVLRNFYQS 253
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 62.2 bits (149), Expect = 6e-12
Identities = 47/254 (18%), Positives = 76/254 (29%), Gaps = 39/254 (15%)
Query: 55 PSLVLIHGFGPEAIWQWRKQVQFFA-PHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGK 113
+VLIHGF P + W +Q + V D FG S+ + AA L
Sbjct: 24 QPVVLIHGF-PLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNT 82
Query: 114 LLEKIGVERFSVVGTSYGGFVAYHMA-RMWPERVEKVVIASSGVNMKRGDNEALVKRANL 172
+LE + ++ +VG S G R+ KV +S ++ A
Sbjct: 83 VLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQ 142
Query: 173 ERIDHLM--------------------LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVH 212
E D ++ L E+ + + S N FF
Sbjct: 143 EFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAP 202
Query: 213 ----------------DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE 256
LI+ G D+ P++ + A +E H
Sbjct: 203 TTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWT 262
Query: 257 NPGLFNSIVKNFLR 270
+ N+ + FL
Sbjct: 263 HAEEVNTALLAFLA 276
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 62.2 bits (149), Expect = 6e-12
Identities = 38/268 (14%), Positives = 85/268 (31%), Gaps = 56/268 (20%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHSTTRSIQRTELFQAAS-- 110
K L+ +HG P + ++ V D G S + +
Sbjct: 25 KAKLMTMHGG-PGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEA 83
Query: 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK----------- 159
+ G E+ ++G+SYGG +A A + + ++ ++++ ++
Sbjct: 84 EALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLID 143
Query: 160 -------------------------------------RGDNEALVKRANLERIDHLMLPE 182
R ++ +LE + +
Sbjct: 144 ELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYR 203
Query: 183 SASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKAR 242
+ T K+ DI + LI G+ D++ P +A + E + +
Sbjct: 204 IMNGPNEFTITGTIKDWDITDKI--SAIKIPTLITVGEYDEVTP-NVARVIHEKI-AGSE 259
Query: 243 LEIIENTSHVPQIENPGLFNSIVKNFLR 270
L + + SH+ E+ +N ++ +F+
Sbjct: 260 LHVFRDCSHLTMWEDREGYNKLLSDFIL 287
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.1 bits (144), Expect = 1e-11
Identities = 44/257 (17%), Positives = 78/257 (30%), Gaps = 57/257 (22%)
Query: 21 ASAGLSSQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQF 77
AS TI + L F P + S++L+HG + WQ +
Sbjct: 2 ASVEQREGTIQVQG-QALFFREALPGSGQA-----RFSVLLLHGIRFSSETWQNLGTLHR 55
Query: 78 FAPH-FNVYVPDLIFFGHS--TTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFV 134
A + DL GHS EL + L +++ + + V+ S G
Sbjct: 56 LAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMY 115
Query: 135 AYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLA 194
+ ++ V + K
Sbjct: 116 SLPFLTAPGSQLPGFVPVAPICTDKI---------------------------------- 141
Query: 195 VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQ 254
+ LIV+GDQD + LK+L R+ I++ H
Sbjct: 142 --------NAANYASVKTPALIVYGDQDPMGQTSFEH-LKQL--PNHRVLIMKGAGHPCY 190
Query: 255 IENPGLFNSIVKNFLRG 271
++ P +++ + +FL+G
Sbjct: 191 LDKPEEWHTGLLDFLQG 207
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 60.3 bits (144), Expect = 3e-11
Identities = 38/263 (14%), Positives = 77/263 (29%), Gaps = 47/263 (17%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFN-VYVPDLI--FFGHSTTRSIQRTELFQAAS 110
+ + +HG P + +RK + FA V PD T F
Sbjct: 47 EDVFLCLHGE-PTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNF 105
Query: 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG--------- 161
L L+E++ + ++V +GGF+ + P R ++++I ++ +
Sbjct: 106 LLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFV 165
Query: 162 ----------------------------------DNEALVKRANLERIDHLMLPESASQL 187
+ EA A + ++
Sbjct: 166 TQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKM 225
Query: 188 RTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIE 247
A F+ ND+ + G +D++ + +K L+ I
Sbjct: 226 VAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIA 285
Query: 248 NTSHVPQIENPGLFNSIVKNFLR 270
+ H Q + +K+F
Sbjct: 286 DAGHFVQEFGEQVAREALKHFAE 308
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 60.2 bits (144), Expect = 3e-11
Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 13/138 (9%)
Query: 27 SQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNV 84
++ +DD TL+F G +V++HG P + + + +
Sbjct: 13 QGSLKVDDRHTLYFEQCGNP--------HGKPVVMLHGG-PGGGCNDKMRRFHDPAKYRI 63
Query: 85 YVPDLIFFGHSTTRSIQRTELFQAAS--LGKLLEKIGVERFSVVGTSYGGFVAYHMARMW 142
+ D G ST + + +L +GV+R+ V G S+G +A A+
Sbjct: 64 VLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTH 123
Query: 143 PERVEKVVIASSGVNMKR 160
P++V ++V+ + +
Sbjct: 124 PQQVTELVLRGIFLLRRF 141
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 49.0 bits (115), Expect = 2e-07
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVK 266
+IV G D + PL+ A +L + KA+L+I + H P +++V+
Sbjct: 258 GVIVHGRYDVVCPLQSAWDLHKAW-PKAQLQISPASGHSAF--EPENVDALVR 307
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Score = 59.9 bits (144), Expect = 4e-11
Identities = 24/227 (10%), Positives = 58/227 (25%), Gaps = 14/227 (6%)
Query: 54 KPSLVLIHGF-GPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS----IQRTELFQA 108
+ LV G ++ + F + L +G T +
Sbjct: 60 RAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALD 119
Query: 109 ASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPER----VEKVVIASSGVNMKRGDNE 164
A +L G ++G S G +A+ +A +V+ + E
Sbjct: 120 AQARAILRAAGDAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIE 179
Query: 165 ALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQI 224
++ + + LA+ + + VL+V +
Sbjct: 180 VW-----SRQLGEGLFAGELEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRASEPLG 234
Query: 225 FPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271
+ + + + + ++ V ++L
Sbjct: 235 DWQEERGDWRAHWDLPHTVADVPGDHFTMMRDHAPAVAEAVLSWLDA 281
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 58.8 bits (140), Expect = 9e-11
Identities = 14/59 (23%), Positives = 21/59 (35%)
Query: 212 HDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
V ++WG D P E +E IE+ H +E P + +K R
Sbjct: 235 LPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 42.6 bits (98), Expect = 2e-05
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 24 GLSSQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH 81
+ + D +H+ G P+L+L+HG+ P W+W K + A H
Sbjct: 7 DFKHYEVQLPD-VKIHYVREG----------AGPTLLLLHGW-PGFWWEWSKVIGPLAEH 54
Query: 82 FNVYVPDLIFFGHSTTR----SIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYH 137
++V VPDL FG S + + A LL+ +G+E+ VVG + V +
Sbjct: 55 YDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHK 114
Query: 138 MARMWPERVEKVVIAS 153
R + +RV K I
Sbjct: 115 FIRKYSDRVIKAAIFD 130
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.3 bits (139), Expect = 2e-10
Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
L+V ++D + +M+ +++ + + IE+ H Q++ P N I+ +L
Sbjct: 262 ALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIEDCGHWTQMDKPTEVNQILIKWLD 317
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.6 bits (124), Expect = 1e-08
Identities = 33/167 (19%), Positives = 64/167 (38%), Gaps = 16/167 (9%)
Query: 23 AGLSSQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP 80
+ +S + + LHF G P++ L HGF PE+ + WR Q+ A
Sbjct: 9 SDMSHGYVTVKPRVRLHFVELG----------SGPAVCLCHGF-PESWYSWRYQIPALAQ 57
Query: 81 H-FNVYVPDLIFF--GHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYH 137
+ V D+ + + + + L+K+G+ + +G +GG + ++
Sbjct: 58 AGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWY 117
Query: 138 MARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESA 184
MA +PERV V ++ + L D+ + +
Sbjct: 118 MALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEP 164
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Score = 55.9 bits (133), Expect = 5e-10
Identities = 26/227 (11%), Positives = 58/227 (25%), Gaps = 24/227 (10%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGK 113
+ + ++ P + + D I R
Sbjct: 17 EQIIFAFPPVLGYG-LMYQNLSSRL-PSYKLCAFDFIEEEDRLDRYADLI---------- 64
Query: 114 LLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE 173
+ ++ G S G +A+ A+ + V + K+ L R
Sbjct: 65 -QKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVES 123
Query: 174 RIDHLMLPESASQLRTLTGLAVSKNLDIVPDF-------FFNDFVHDVLIVWGDQDQIFP 226
++ LM ++ + + D+ ++ D P
Sbjct: 124 DVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIP 183
Query: 227 LKMATELKELLGKKARLEIIENTSHVPQIENPGL--FNSIVKNFLRG 271
+A +E R++ +H ++ L I+ FL
Sbjct: 184 EWLA-SWEEATTGAYRMKRGF-GTHAEMLQGETLDRNAGILLEFLNT 228
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 54.8 bits (130), Expect = 2e-09
Identities = 36/259 (13%), Positives = 69/259 (26%), Gaps = 42/259 (16%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFF--------APHFNVYVPDLIFFGHSTTRSIQRTE 104
K+ + LIHG W ++ YV D G S T
Sbjct: 57 KRYPITLIHGCCLTG-MTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINA 115
Query: 105 LFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARM-WPERVEKVVIASSGVNMKRG 161
+ + L + + +G +P + + + +
Sbjct: 116 VKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGS 175
Query: 162 DNEALVKRANLERIDHLMLPESASQLRTLTG----------------LAVSKNLDIVPDF 205
ANL ++ + ++V P+
Sbjct: 176 MPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPKPED 235
Query: 206 FFNDFVHDVLIVWGDQDQIFP-----LKMATELKELL---GKKARL-----EIIENTSHV 252
VL+V+GD + FP LK + L G K +L + SH+
Sbjct: 236 VKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHM 295
Query: 253 PQIE-NPGLFNSIVKNFLR 270
+ N ++ +++
Sbjct: 296 MMQDRNNLQVADLILDWIG 314
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 54.9 bits (130), Expect = 2e-09
Identities = 29/137 (21%), Positives = 45/137 (32%), Gaps = 13/137 (9%)
Query: 26 SSQTIDIDDETTLHF--WGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFN 83
S +D D +++ G V IHG P + F +
Sbjct: 12 DSGWLDTGDGHRIYWELSGNP--------NGKPAVFIHGG-PGGGISPHHRQLFDPERYK 62
Query: 84 VYVPDLIFFGHSTTRSIQRTELFQAASLGKLL--EKIGVERFSVVGTSYGGFVAYHMARM 141
V + D G S + E GVE++ V G S+G +A A+
Sbjct: 63 VLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQT 122
Query: 142 WPERVEKVVIASSGVNM 158
PERV ++V+
Sbjct: 123 HPERVSEMVLRGIFTLR 139
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 49.1 bits (115), Expect = 2e-07
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVK 266
+IV G D ++ A +L + +A L I+E H + PG+ + ++
Sbjct: 257 AVIVHGRYDMACQVQNAWDLAKAW-PEAELHIVEGAGH--SYDEPGILHQLMI 306
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 52.0 bits (124), Expect = 2e-08
Identities = 16/99 (16%), Positives = 28/99 (28%), Gaps = 5/99 (5%)
Query: 53 KKPSLVLIHGFG-PEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAAS 110
++L+ G G + + F + Q + +
Sbjct: 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLN---DTQVNTEYMVNA 86
Query: 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKV 149
+ L G + V+ S GG VA +P KV
Sbjct: 87 ITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKV 125
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 51.5 bits (122), Expect = 3e-08
Identities = 34/230 (14%), Positives = 70/230 (30%), Gaps = 25/230 (10%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLG 112
P+++++ G ++ + D G + + S
Sbjct: 130 PHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAV 189
Query: 113 ----KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVK 168
LE I + V+G S GG A A P R+ + ++ D E +
Sbjct: 190 VDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDLETPLT 248
Query: 169 RANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHD----VLIVWGDQDQI 224
+ + + + + E A L + D + I+ G D++
Sbjct: 249 KESWKYVSKVDTLEEA-------------RLHVHAALETRDVLSQIACPTYILHGVHDEV 295
Query: 225 FPLKMATELKELL-GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGSL 273
PL + EL+ + L + ++ H + ++L L
Sbjct: 296 -PLSFVDTVLELVPAEHLNLVVEKDGDHC-CHNLGIRPRLEMADWLYDVL 343
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 50.9 bits (120), Expect = 6e-08
Identities = 15/140 (10%), Positives = 43/140 (30%), Gaps = 22/140 (15%)
Query: 37 TLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQV-------QFFAPHFNVYVPDL 89
+ ++ ++P L HG + W + ++V++ +
Sbjct: 41 GIDRIPYGRKNSENIGRRPVAFLQHGLL-ASATNWISNLPNNSLAFILADAGYDVWLGNS 99
Query: 90 IFFGHSTTRS--------------IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVA 135
+ + + A++ +L+K G ++ VG S G +
Sbjct: 100 RGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIG 159
Query: 136 YHMARMWPERVEKVVIASSG 155
+ P+ +++ +
Sbjct: 160 FIAFSTNPKLAKRIKTFYAL 179
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 43.5 bits (101), Expect = 1e-05
Identities = 8/60 (13%), Positives = 18/60 (30%), Gaps = 3/60 (5%)
Query: 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI---ENPGLFNSIVKNFLR 270
+ + G D + L L I +H+ I + P + + + +
Sbjct: 316 IAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMG 375
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Score = 46.7 bits (110), Expect = 2e-07
Identities = 17/107 (15%), Positives = 36/107 (33%), Gaps = 10/107 (9%)
Query: 60 IHGFGPEAIW---QWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLE 116
G GP + + + + + Y+ DL +G + + EL +
Sbjct: 17 RVGKGPPVLLVAEEASRWPEALPEGYAFYLLDLPGYGRTEGPRMAPEELAHFVA--GFAV 74
Query: 117 KIGVERFSVVGTSYGGFVAYHMA-----RMWPERVEKVVIASSGVNM 158
+ + V+ G + H+ + E VE + SS ++
Sbjct: 75 MMNLGAPWVLLRGLGLALGPHLEALGLRALPAEGVEVAEVLSSKLSY 121
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 47.4 bits (112), Expect = 6e-07
Identities = 24/221 (10%), Positives = 54/221 (24%), Gaps = 12/221 (5%)
Query: 55 PSLVLIHGF-GPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGK 113
+++ G ++ + V + A
Sbjct: 43 VTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGE-PLPSSMAAVAAVQADA 101
Query: 114 LLEKIGVERFSVVGTSYGGFVAYHMARMWP---ERVEKVVIASSGVNMKRGDNEALVKRA 170
++ G + F V G S G +AY +A VV+ + A ++
Sbjct: 102 VIRTQGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEEL 161
Query: 171 NLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMA 230
D + ++L A+ + + + L+V +
Sbjct: 162 TATLFDRETVRMDDTRLT-----ALGAYDRLTGQWRPRETGLPTLLVSAGEP--MGPWPD 214
Query: 231 TELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271
K + + E+ + +L G
Sbjct: 215 DSWKPTWPFEHDTVAVPGDHFTMVQEHADAIARHIDAWLGG 255
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Score = 45.3 bits (106), Expect = 1e-06
Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 5/153 (3%)
Query: 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLG 112
+V++HG G A + + + ++ + F T + + +
Sbjct: 2 HNPVVMVHGIG-GASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGP-VLSRFVQ 59
Query: 113 KLLEKIGVERFSVVGTSYGGFVA--YHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA 170
K+L++ G ++ +V S GG Y +V VV + G
Sbjct: 60 KVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKALPGTDPN 119
Query: 171 NLERIDHLMLPESASQLRTLTGLAVSKNLDIVP 203
+ + L+ L ++N+ I
Sbjct: 120 QKILYTSIYSSADMIVMNYLSRLDGARNVQIHG 152
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} Length = 186 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Score = 45.1 bits (105), Expect = 2e-06
Identities = 22/218 (10%), Positives = 52/218 (23%), Gaps = 42/218 (19%)
Query: 58 VLIHGFG--PEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLL 115
+IHG+ W + + A + ++ T +L
Sbjct: 5 YIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPRLEDWLDTLSLYQHTLH--- 61
Query: 116 EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERI 175
E +V S G R +
Sbjct: 62 -----ENTYLVAHSLGCPAILRFLEHLQLRA---------------------------AL 89
Query: 176 DHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKE 235
++L ++ + + ++ DQI P + +L +
Sbjct: 90 GGIILVSGFAKSLPTLQMLDEFTQGSFDHQKIIESAKHRAVIASKDDQIVPFSFSKDLAQ 149
Query: 236 LLGKKARLEIIENTSHVPQIENPGLFNSI---VKNFLR 270
+ A L +++ H + E + + ++
Sbjct: 150 QID--AALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFS 185
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 45.5 bits (106), Expect = 3e-06
Identities = 38/268 (14%), Positives = 68/268 (25%), Gaps = 34/268 (12%)
Query: 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVP 87
T + W K P++V HG+ + ++ +A H + +
Sbjct: 60 TYKSFGNARITGW---YAVPDKEGPHPAIVKYHGY-NASYDGEIHEMVNWALHGYATFGM 115
Query: 88 DLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV------------------------ERF 123
+ S SI +L+K R
Sbjct: 116 LVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRI 175
Query: 124 SVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPES 183
V G S GG + A + V ++ + +++ LE S
Sbjct: 176 GVTGGSQGGGLTIAAAALSDIPK-AAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGS 234
Query: 184 ASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARL 243
A+ + VL+ G D++ P L K L
Sbjct: 235 PETEVQ----AMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKEL 290
Query: 244 EIIENTSHVPQIENPGLFNSIVKNFLRG 271
++ H + K L+G
Sbjct: 291 KVYRYFGHEYIPAFQTEKLAFFKQILKG 318
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 44.9 bits (105), Expect = 3e-06
Identities = 25/219 (11%), Positives = 54/219 (24%), Gaps = 22/219 (10%)
Query: 55 PSLVLIHGFGP---EAIWQWRKQVQFFAPHFNVYV--PD---LIFFGHSTTRSIQRTELF 106
++ L+ F + W + V P + + ++ + F
Sbjct: 28 HAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTF 87
Query: 107 QAASLGKLLEKIGV---ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN 163
+A L L + VG + GG+ A +A P+R S +
Sbjct: 88 LSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTT 147
Query: 164 EALVKRANLERID---HLMLPESASQLR------TLTGLAVSKNLDIVPDFFFNDFVHDV 214
+ + + M L N + N D
Sbjct: 148 NGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDP 207
Query: 215 LIVWGDQDQIF--PLKMATELKELLGKKARLEIIENTSH 251
+ G + + + + G + + +
Sbjct: 208 AAMIGQAAEAMGNSRMFYNQYRSVGGHNGHFDFPASGDN 246
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (103), Expect = 5e-06
Identities = 13/98 (13%), Positives = 24/98 (24%), Gaps = 8/98 (8%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLG 112
+ L L+H + + Y + A +
Sbjct: 24 SERPLFLVHPIEGST-TVFHSLASRLSIP--TYGLQCTRAAPLDS-----IHSLAAYYID 75
Query: 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVV 150
+ + + V G SYG VA+ M +
Sbjct: 76 CIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAP 113
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} Length = 238 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Score = 44.0 bits (102), Expect = 6e-06
Identities = 34/239 (14%), Positives = 61/239 (25%), Gaps = 44/239 (18%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRT-------- 103
K L+ +HG + + +A F + D G
Sbjct: 23 PKALLLALHGLQ-GSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEV 81
Query: 104 ------ELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157
+A + + E+ + G S G FVA+ + + SG
Sbjct: 82 YRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFP 141
Query: 158 MKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIV 217
MK + + L +L +
Sbjct: 142 MKLPQGQVVEDPGVLALYQAPP-----------------------ATRGEAYGGVPLLHL 178
Query: 218 WGDQDQIFPLKMATELKELL---GKKARLEII--ENTSHVPQIENPGLFNSIVKNFLRG 271
G +D I PL + E L + RL E H + + ++++L
Sbjct: 179 HGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEA 237
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Score = 42.7 bits (100), Expect = 2e-05
Identities = 22/152 (14%), Positives = 40/152 (26%), Gaps = 18/152 (11%)
Query: 115 LEKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL 172
L V SV G + GG++A + + + +G N+
Sbjct: 3 LPAFNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYN 62
Query: 173 ERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATE 232
+ P + + + +A NL + + G D + +
Sbjct: 63 -GYPSITTPTANMKSWSGNQIASVANLGQRK----------IYMWTGSSDTTVGPNVMNQ 111
Query: 233 LKELLGKKA-----RLEIIENTSHVPQIENPG 259
LK LG H + G
Sbjct: 112 LKAQLGNFDNSANVSYVTTTGAVHTFPTDFNG 143
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.4 bits (95), Expect = 4e-05
Identities = 29/232 (12%), Positives = 70/232 (30%), Gaps = 17/232 (7%)
Query: 53 KKPSLVLIHG----FGPEAIWQWRKQVQFFAPHFN--VYVPDLIFFGHSTTRSIQRTELF 106
+ +++ IHG + + I + S + R
Sbjct: 30 TREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNPRNLYD 89
Query: 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL 166
+++ +L+++ G+ ++VG S G + + + EK+ A + + +
Sbjct: 90 AVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRV 149
Query: 167 VKRANLERIDHLMLPESASQLRT--------LTGLAVSKNLDIVPDFFFNDFVHDVLIVW 218
+ + L++ T + + F D+ +V
Sbjct: 150 FLLDGIYSLKELLIEYPEYDCFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVH 209
Query: 219 GDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGLFNSIVKN 267
D++ L+ L L +L + + H +N + I N
Sbjct: 210 SYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKNGKVAKYIFDN 261
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Score = 40.4 bits (93), Expect = 8e-05
Identities = 18/116 (15%), Positives = 36/116 (31%), Gaps = 16/116 (13%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVP-------------DLIFFGHSTTRS 99
+ L L+HG G + + AP + + I +S
Sbjct: 22 SRECLFLLHGSGVDE-TTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKS 80
Query: 100 IQRTELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIAS 153
I AA + ++ G+ + + +G S G + + + P V +
Sbjct: 81 ILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLR 136
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} Length = 203 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 40.5 bits (93), Expect = 8e-05
Identities = 20/114 (17%), Positives = 33/114 (28%), Gaps = 14/114 (12%)
Query: 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTR-------------S 99
P VL+HG G + Q+ P + P H R
Sbjct: 16 GAPLFVLLHGTGGDE-NQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVD 74
Query: 100 IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIAS 153
++R A + E +G S G + ++ PE + V+
Sbjct: 75 LERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMH 128
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} Length = 280 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 39.5 bits (91), Expect = 2e-04
Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 18/141 (12%)
Query: 55 PSLVLIHGFGP---EAIWQWRKQVQFFAPHFNVYV--PD-------LIFFGHSTTRSIQR 102
++ L+ G W + V P ++ S +
Sbjct: 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNY 89
Query: 103 TELFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV 156
T ++ ++ + + VG S G A +A +P++ S +
Sbjct: 90 TYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFL 149
Query: 157 NMKRGDNEALVKRANLERIDH 177
N L+ A + +
Sbjct: 150 NPSESWWPTLIGLAMNDSGGY 170
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Score = 38.1 bits (87), Expect = 8e-04
Identities = 6/57 (10%), Positives = 13/57 (22%), Gaps = 3/57 (5%)
Query: 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270
+ +D + G H +E P + + F+
Sbjct: 338 FGFSFFPKDLCPVPR---SWIATTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVE 391
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Score = 36.6 bits (83), Expect = 0.002
Identities = 30/247 (12%), Positives = 58/247 (23%), Gaps = 27/247 (10%)
Query: 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPD 88
T + W L +K V+ + + + + + +V D
Sbjct: 59 TFSGYRGQRIKGW---LLVPKLEEEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMD 115
Query: 89 LIFFGHSTTR---SIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPER 145
G + G + I R + V A +
Sbjct: 116 TRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQ 175
Query: 146 VEKVVIASSGVNMKRGDNEALV--------------KRANLERIDHLMLPESASQLRTLT 191
V++ I +G + G A+ + R L+ +++
Sbjct: 176 VDQERIVIAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFL 235
Query: 192 GLAVSKNLDIVPDFFFNDFVHD-------VLIVWGDQDQIFPLKMATELKELLGKKARLE 244
K + + D V+ L G D I P +
Sbjct: 236 KTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIR 295
Query: 245 IIENTSH 251
I +H
Sbjct: 296 IYPYNNH 302
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 273 | |||
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 100.0 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.98 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.97 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.97 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.97 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.97 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.97 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.96 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.96 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.95 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.94 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.94 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.94 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.93 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.92 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.92 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.92 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.91 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.91 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.9 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.9 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.89 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.89 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.89 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.88 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.88 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.88 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.88 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.87 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.87 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.87 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.87 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.86 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.84 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.83 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.82 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.8 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.8 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.76 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.76 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.75 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.74 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.73 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.73 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.71 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.69 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.68 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.61 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.58 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.54 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.53 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.49 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.45 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.4 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 99.4 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 99.39 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.38 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.37 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 99.33 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 99.32 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.3 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 99.3 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 99.21 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 99.17 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 99.1 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.68 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 98.47 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 98.44 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 98.41 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 98.35 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 98.3 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 98.27 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 98.19 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 98.15 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 98.12 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 97.84 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.83 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.82 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.75 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.72 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 96.71 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 96.35 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 93.81 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 93.67 |
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=5.1e-39 Score=240.15 Aligned_cols=238 Identities=19% Similarity=0.288 Sum_probs=176.7
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQR 102 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~ 102 (273)
+..+++++ ||.+++|...| ++|+|||+||++++. ...|..+++.|+++|+|+++|+||||.|+.+....
T Consensus 2 ~~~~~~~~-dg~~l~y~~~G--------~g~~vvllHG~~~~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~ 72 (268)
T d1j1ia_ 2 YVERFVNA-GGVETRYLEAG--------KGQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEY 72 (268)
T ss_dssp CEEEEEEE-TTEEEEEEEEC--------CSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCC
T ss_pred CcCeEEEE-CCEEEEEEEEc--------CCCeEEEECCCCCCccHHHHHHHHHHHHhcCCEEEEEcccccccccCCcccc
Confidence 45677888 99999999986 357899999988654 24577888999888999999999999999888888
Q ss_pred cHHHHHHHHHHHHHHhCC-ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH--HHhhh--------hh
Q 024042 103 TELFQAASLGKLLEKIGV-ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE--ALVKR--------AN 171 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~--~~~~~--------~~ 171 (273)
+.+..++++.++++.++. ++++++|||+||.+++.+|.++|++|+++|+++++......... ..... ..
T Consensus 73 ~~~~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (268)
T d1j1ia_ 73 TQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHL 152 (268)
T ss_dssp CHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHHHH
T ss_pred ccccccccchhhHHHhhhcccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhhhhhhhhhhhhhhHHH
Confidence 999999999999999987 57999999999999999999999999999999986543321100 00000 00
Q ss_pred hhhhhhccCCCChHHH----------------HHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHH
Q 024042 172 LERIDHLMLPESASQL----------------RTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKE 235 (273)
Q Consensus 172 ~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~ 235 (273)
................ .....................++..|+++++|++|.++|.+..+.+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~ 232 (268)
T d1j1ia_ 153 VKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLD 232 (268)
T ss_dssp HHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred HHHHhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCCCHHHHHHHHH
Confidence 0000000000111000 000111111111223344566777899999999999999999999999
Q ss_pred HhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 236 LLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 236 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.+ +++++++++++||+++.|+|+++.+.|.+||.++
T Consensus 233 ~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~r 268 (268)
T d1j1ia_ 233 LI-DDSWGYIIPHCGHWAMIEHPEDFANATLSFLSLR 268 (268)
T ss_dssp HC-TTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred hC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHcCC
Confidence 99 9999999999999999999999999999999864
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=6.6e-39 Score=242.27 Aligned_cols=239 Identities=19% Similarity=0.277 Sum_probs=181.2
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcccc
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
.++.+++++ +|.+++|...| .+++|+|||+||++++. ..|..+++.|+++|+|+++|+||||.|..+...++
T Consensus 6 p~~~~~i~~-~g~~i~y~~~G------~~~~p~lvllHG~~~~~-~~~~~~~~~L~~~~~vi~~d~~G~G~S~~~~~~~~ 77 (291)
T d1bn7a_ 6 PFDPHYVEV-LGERMHYVDVG------PRDGTPVLFLHGNPTSS-YLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYF 77 (291)
T ss_dssp CCCCEEEEE-TTEEEEEEEES------CSSSSCEEEECCTTCCG-GGGTTTHHHHTTTSCEEEECCTTSTTSCCCSCCCC
T ss_pred CCCCeEEEE-CCEEEEEEEeC------CCCCCeEEEECCCCCCH-HHHHHHHHHHhcCCEEEEEeCCCCccccccccccc
Confidence 567889999 99999999987 45678999999999998 89999999998889999999999999998877889
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch--H---HHhhhhh-h-----
Q 024042 104 ELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN--E---ALVKRAN-L----- 172 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~--~---~~~~~~~-~----- 172 (273)
.+++++++.+++++++.++++++|||+||.+++.++.++|+++++++++++......... . ....... .
T Consensus 78 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (291)
T d1bn7a_ 78 FDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRE 157 (291)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTSTTHHHH
T ss_pred hhHHHHHHhhhhhhhccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhhhhhHHH
Confidence 999999999999999999999999999999999999999999999999886654332210 0 0000000 0
Q ss_pred ----------hhhhhcc-CCCChHHHHHHhhhhhc--------------cCCCCC---------hhhHHhhhhccEEEEe
Q 024042 173 ----------ERIDHLM-LPESASQLRTLTGLAVS--------------KNLDIV---------PDFFFNDFVHDVLIVW 218 (273)
Q Consensus 173 ----------~~~~~~~-~~~~~~~~~~~~~~~~~--------------~~~~~~---------~~~~~~~~~~p~l~i~ 218 (273)
....... ................. ...... ......++..|+++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 237 (291)
T d1bn7a_ 158 LIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFW 237 (291)
T ss_dssp HHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred hhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcCCCCEEEEE
Confidence 0000000 01111111111110000 000000 0112345667999999
Q ss_pred cCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 219 GDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 219 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
|++|.++|.+..+.+.+.+ +++++++++++||+.+.|+|+++.+.|.+||+.
T Consensus 238 G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~ 289 (291)
T d1bn7a_ 238 GTPGVLIPPAEAARLAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPG 289 (291)
T ss_dssp EEECSSSCHHHHHHHHHHS-TTEEEEEEEEESSCGGGTCHHHHHHHHHHHSGG
T ss_pred eCCCCCcCHHHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHHh
Confidence 9999999999999999999 999999999999999999999999999999985
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=2.6e-37 Score=232.48 Aligned_cols=237 Identities=26% Similarity=0.386 Sum_probs=173.1
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcc---
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ--- 101 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~--- 101 (273)
.+++++ ++.+++|...| ++++|+|||+||++++. ...|..+++.|+++|+|+++|+||||.|+.....
T Consensus 6 ~~~~~~-~~~~~h~~~~G------~~~~p~ivllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~ 78 (281)
T d1c4xa_ 6 EKRFPS-GTLASHALVAG------DPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGH 78 (281)
T ss_dssp EEEECC-TTSCEEEEEES------CTTSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSS
T ss_pred EEEEcc-CCEEEEEEEEe------cCCCCEEEEECCCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccc
Confidence 445555 67899999988 66789999999987644 2457888999988899999999999999865432
Q ss_pred --ccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh-------
Q 024042 102 --RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL------- 172 (273)
Q Consensus 102 --~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~------- 172 (273)
...++.++++.+++++++.++++++||||||.+|+.+|.++|++++++|++++..................
T Consensus 79 ~~~~~~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (281)
T d1c4xa_ 79 IMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLT 158 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHH
T ss_pred chhhHHHhhhhccccccccccccceeccccccccccccccccccccccceEEeccccCccccchhHHHHHHHhhhhcccc
Confidence 35667788999999999999999999999999999999999999999999998654433221111111100
Q ss_pred ---hhhhhcc-CCC----ChHHHHHH------------hhhh---hcc--CCCCChhhHHhhhhccEEEEecCCCCCCCh
Q 024042 173 ---ERIDHLM-LPE----SASQLRTL------------TGLA---VSK--NLDIVPDFFFNDFVHDVLIVWGDQDQIFPL 227 (273)
Q Consensus 173 ---~~~~~~~-~~~----~~~~~~~~------------~~~~---~~~--~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~ 227 (273)
....... .+. ........ .... ... ...........++..|+|+++|++|.++|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~ 238 (281)
T d1c4xa_ 159 PYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPL 238 (281)
T ss_dssp HHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCT
T ss_pred hhhhhhhhhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCCCCcCH
Confidence 0000000 000 00111000 0000 000 011223344566777999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 228 KMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+..+.+.+.+ +++++++++++||+.++|+|+++.+.|.+||+.
T Consensus 239 ~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 239 DTSLYLTKHL-KHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 281 (281)
T ss_dssp HHHHHHHHHC-SSEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHhCC
Confidence 9999999999 899999999999999999999999999999974
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=1.8e-37 Score=234.44 Aligned_cols=239 Identities=21% Similarity=0.315 Sum_probs=170.8
Q ss_pred hCCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-
Q 024042 22 SAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI- 100 (273)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~- 100 (273)
+..++..++++ +|.+++|...| ++|+|||+||++++. ..|..+++.|+++|+|+++|+||+|.|.....
T Consensus 5 ~~~~~~~~~~~-~~~~l~y~~~G--------~gp~vv~lHG~~~~~-~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~ 74 (293)
T d1ehya_ 5 PEDFKHYEVQL-PDVKIHYVREG--------AGPTLLLLHGWPGFW-WEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLN 74 (293)
T ss_dssp GGGSCEEEEEC-SSCEEEEEEEE--------CSSEEEEECCSSCCG-GGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTT
T ss_pred CCCCcceEEEE-CCEEEEEEEEC--------CCCeEEEECCCCCCH-HHHHHHHHHHhcCCEEEEecCCcccCCcccccc
Confidence 34678888999 78899999976 468999999999999 99999999998889999999999999875443
Q ss_pred ---cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch-----------HHH
Q 024042 101 ---QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN-----------EAL 166 (273)
Q Consensus 101 ---~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~-----------~~~ 166 (273)
..+.++.++++.+++++++.++++++||||||.+|+.++.++|+++.+++++++......... ...
T Consensus 75 ~~~~~~~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (293)
T d1ehya_ 75 DLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQF 154 (293)
T ss_dssp CGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHH
T ss_pred ccccccchhhhhHHHhhhhhcCccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhhhh
Confidence 357788999999999999999999999999999999999999999999999998643211100 000
Q ss_pred hhhh----------------hhhhhhhccCC---CChHHHHHHhhh----------------hhccCCCCChhhHHhhhh
Q 024042 167 VKRA----------------NLERIDHLMLP---ESASQLRTLTGL----------------AVSKNLDIVPDFFFNDFV 211 (273)
Q Consensus 167 ~~~~----------------~~~~~~~~~~~---~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~ 211 (273)
.... ....+...... ............ ................+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (293)
T d1ehya_ 155 HQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSD 234 (293)
T ss_dssp TTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBC
T ss_pred hccchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhhhhhhhhccccchhhhhhhhhhccC
Confidence 0000 00000000000 011111111100 000011111111223345
Q ss_pred ccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 212 HDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 212 ~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.|+++++|++|.++|.+...++.+...++.++++++++||+++.|+|+++++.|.+|++
T Consensus 235 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 235 LPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp SCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred CceEEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHHHhhC
Confidence 59999999999999987765544444389999999999999999999999999999985
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=5.7e-37 Score=229.31 Aligned_cols=235 Identities=20% Similarity=0.330 Sum_probs=171.0
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-cccH
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI-QRTE 104 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~-~~~~ 104 (273)
+++++ +|.+++|+..| ++|+|||+||++++. ...|..+++.|+++|+|+++|+||||.|..+.. ..+.
T Consensus 6 ~~i~~-~G~~~~Y~~~G--------~G~pvvllHG~~~~~~~~~~~~~~~~~l~~~~~vi~~Dl~G~G~S~~~~~~~~~~ 76 (271)
T d1uk8a_ 6 KSILA-AGVLTNYHDVG--------EGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSK 76 (271)
T ss_dssp EEEEE-TTEEEEEEEEC--------CSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCH
T ss_pred CEEEE-CCEEEEEEEEe--------eCCeEEEECCCCCCccHHHHHHHHHHHHhCCCEEEEEeCCCCCCccccccccccc
Confidence 56767 99999999987 357899999997654 244667888898889999999999999986544 4578
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhh------hhhhhh-
Q 024042 105 LFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRAN------LERIDH- 177 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~- 177 (273)
++.++++..++++++.++++++||||||.+|+.++.++|++++++|++++................. ......
T Consensus 77 ~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (271)
T d1uk8a_ 77 DSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDI 156 (271)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHHHHHHHH
T ss_pred cccchhhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhhhhhhhccchhHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999998865543322110000000 000000
Q ss_pred ccC---CCChHHHHHHhh--------hhhccCC----------CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHH
Q 024042 178 LML---PESASQLRTLTG--------LAVSKNL----------DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKEL 236 (273)
Q Consensus 178 ~~~---~~~~~~~~~~~~--------~~~~~~~----------~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~ 236 (273)
... ............ ....... .......+.++..|+++++|++|.++|.+..+.+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 236 (271)
T d1uk8a_ 157 FAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGEL 236 (271)
T ss_dssp HCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred HhhhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHHHHhhccceeEEecCCCCCcCHHHHHHHHHh
Confidence 000 000000000000 0000000 0111233456667999999999999999999999999
Q ss_pred hcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 237 LGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 237 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+ +++++++++++||+++.++|+++.+.|.+||++.
T Consensus 237 ~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e~ 271 (271)
T d1uk8a_ 237 I-DRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEA 271 (271)
T ss_dssp C-TTEEEEEESSCCSCHHHHTHHHHHHHHHHHHHTC
T ss_pred C-CCCEEEEECCCCCchHHHCHHHHHHHHHHHHhcC
Confidence 9 8999999999999999999999999999999873
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=2e-37 Score=234.82 Aligned_cols=237 Identities=19% Similarity=0.163 Sum_probs=174.0
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH-HHHHHhhcCC-CeEEeecCCCCCCCCCCCc---c
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW-RKQVQFFAPH-FNVYVPDLIFFGHSTTRSI---Q 101 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~---~ 101 (273)
++.+++ +|.+++|...| ++++|+|||+||++.+. ..| ..+.+.|.+. |+|+++|+||||.|..... .
T Consensus 2 e~~~~~-g~~~i~y~~~G------~~~~p~vvl~HG~~~~~-~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~ 73 (297)
T d1q0ra_ 2 ERIVPS-GDVELWSDDFG------DPADPALLLVMGGNLSA-LGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHP 73 (297)
T ss_dssp EEEEEE-TTEEEEEEEES------CTTSCEEEEECCTTCCG-GGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSC
T ss_pred CeEEEE-CCEEEEEEEec------CCCCCEEEEECCCCcCh-hHHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccc
Confidence 456666 88999999998 56789999999999988 777 4566666655 9999999999999975432 3
Q ss_pred ccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHH---------------
Q 024042 102 RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL--------------- 166 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~--------------- 166 (273)
++.++.++++..++++++.++++++|||+||.+++.+|..+|++|+++|++++............
T Consensus 74 ~~~~~~~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (297)
T d1q0ra_ 74 YGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGP 153 (297)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCC
T ss_pred cccchhhhhhccccccccccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhhhhhhhh
Confidence 58999999999999999999999999999999999999999999999999987654332110000
Q ss_pred ----hhhhh------------------h-hhhhhccCCCChHHHHHHhhhhhccC---------------CCCChhhHHh
Q 024042 167 ----VKRAN------------------L-ERIDHLMLPESASQLRTLTGLAVSKN---------------LDIVPDFFFN 208 (273)
Q Consensus 167 ----~~~~~------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 208 (273)
..... . ........+................. ........+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 233 (297)
T d1q0ra_ 154 QQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELR 233 (297)
T ss_dssp CHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGGG
T ss_pred hHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccccchhhhh
Confidence 00000 0 00000001111111111111110000 0111223456
Q ss_pred hhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 209 DFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 209 ~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
++..|+++++|++|.++|++.++.+.+.+ +++++++++++||+++.++|+++.+.|.+||++.
T Consensus 234 ~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~ 296 (297)
T d1q0ra_ 234 EVTVPTLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGHALPSSVHGPLAEVILAHTRSA 296 (297)
T ss_dssp GCCSCEEEEEETTCSSSCTTHHHHHHHTS-TTEEEEEETTCCSSCCGGGHHHHHHHHHHHHHHT
T ss_pred ccCCceEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCcchhhCHHHHHHHHHHHHHhh
Confidence 67779999999999999999999999999 9999999999999999999999999999999863
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-38 Score=241.98 Aligned_cols=241 Identities=18% Similarity=0.302 Sum_probs=176.5
Q ss_pred hCCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc
Q 024042 22 SAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~ 100 (273)
+..+.+.+++++||.+++|...| ++|+|||+||++++. ..|+.+++.|.+. |+|+++|+||||.|..+..
T Consensus 8 p~~~~~~~v~~~~g~~i~y~~~G--------~gp~vlllHG~~~~~-~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~ 78 (322)
T d1zd3a2 8 PSDMSHGYVTVKPRVRLHFVELG--------SGPAVCLCHGFPESW-YSWRYQIPALAQAGYRVLAMDMKGYGESSAPPE 78 (322)
T ss_dssp GGGSEEEEEEEETTEEEEEEEEC--------CSSEEEEECCTTCCG-GGGTTHHHHHHHTTCEEEEEECTTSTTSCCCSC
T ss_pred CCCCceeEEEECCCCEEEEEEEc--------CCCeEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEeccccccccccccc
Confidence 34678889999999999999986 358999999999998 9999999999765 9999999999999986543
Q ss_pred --cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhh--------
Q 024042 101 --QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA-------- 170 (273)
Q Consensus 101 --~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~-------- 170 (273)
.++.++.++++.+++++++.++++++|||+||.+++.+|.++|++++++|+++++...............
T Consensus 79 ~~~~~~~~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (322)
T d1zd3a2 79 IEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQ 158 (322)
T ss_dssp GGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHH
T ss_pred cccccccccchhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhH
Confidence 4588999999999999999999999999999999999999999999999999875433221110000000
Q ss_pred ----------------hhhhhhhccC---C---------------------------CChHHHHHHhhhhhc-------c
Q 024042 171 ----------------NLERIDHLML---P---------------------------ESASQLRTLTGLAVS-------K 197 (273)
Q Consensus 171 ----------------~~~~~~~~~~---~---------------------------~~~~~~~~~~~~~~~-------~ 197 (273)
....+..... . ............... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (322)
T d1zd3a2 159 LYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLN 238 (322)
T ss_dssp HHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTHHHHH
T ss_pred HhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhcccccccc
Confidence 0000000000 0 000000000000000 0
Q ss_pred CCCC-------ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 198 NLDI-------VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 198 ~~~~-------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.... .......++..|+++++|++|.+++++..+.+.+.+ ++.++++++++||+.++|+|+++.+.|.+||+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~v~~~i~~FL~ 317 (322)
T d1zd3a2 239 WYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIEDCGHWTQMDKPTEVNQILIKWLD 317 (322)
T ss_dssp TTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred cccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHh
Confidence 0000 001112344559999999999999999988888888 89999999999999999999999999999998
Q ss_pred cc
Q 024042 271 GS 272 (273)
Q Consensus 271 ~~ 272 (273)
++
T Consensus 318 ~~ 319 (322)
T d1zd3a2 318 SD 319 (322)
T ss_dssp HH
T ss_pred hc
Confidence 64
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=9e-37 Score=228.59 Aligned_cols=235 Identities=23% Similarity=0.223 Sum_probs=170.3
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
+|+++||.+|+|..+| ++++|+|||+||++++. ..|..+++.|.+. |+|+++|+||||.|..+...++.+++
T Consensus 2 ~i~~~dG~~l~y~~~G------~~~~~~vv~lHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 74 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWG------PRDGLPVVFHHGWPLSA-DDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTY 74 (275)
T ss_dssp EEECTTSCEEEEEEES------CTTSCEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHH
T ss_pred EEEecCCCEEEEEEec------CCCCCeEEEECCCCCCH-HHHHHHHHHHHhCCCEEEEEeccccccccccccccccccc
Confidence 6888999999999998 45678999999999998 8999999888555 99999999999999987778899999
Q ss_pred HHHHHHHHHHhCCccEEEEEecc-chHHHHHHHHhCCcccceEEEecCCCCCCCcc-------hHHHhh----hhh----
Q 024042 108 AASLGKLLEKIGVERFSVVGTSY-GGFVAYHMARMWPERVEKVVIASSGVNMKRGD-------NEALVK----RAN---- 171 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~-Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-------~~~~~~----~~~---- 171 (273)
++++.+++++++.++++++|||+ ||.++..++.++|++|++++++++........ ...... ...
T Consensus 75 ~~~~~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (275)
T d1a88a_ 75 AADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRA 154 (275)
T ss_dssp HHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHH
T ss_pred ccccccccccccccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhhhhhH
Confidence 99999999999999999999997 66677778899999999999998754322111 000000 000
Q ss_pred ---hhh----hhhc---cCCCChHHHHHHhhhhhccC-----------CCCChhhHHhhhhccEEEEecCCCCCCChHH-
Q 024042 172 ---LER----IDHL---MLPESASQLRTLTGLAVSKN-----------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKM- 229 (273)
Q Consensus 172 ---~~~----~~~~---~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~- 229 (273)
... .... .................... ........+.++..|+++++|++|.++|.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~ 234 (275)
T d1a88a_ 155 QFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADA 234 (275)
T ss_dssp HHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCSTTT
T ss_pred HHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhHHHHhhccccceeecCCCCCcCHHHH
Confidence 000 0000 00111111111110000000 0011122345667799999999999998764
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 230 ATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+.+.+.+ +++++++++++||+.+.|+|+++.+.|.+||+.
T Consensus 235 ~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 235 APKSAELL-ANATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp HHHHHHHS-TTEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred HHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 45666666 899999999999999999999999999999974
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=3.8e-36 Score=225.11 Aligned_cols=233 Identities=18% Similarity=0.186 Sum_probs=166.4
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
.++++||.+++|...| ++|+|||+||++++. ..|..+++.|.+. |+|+++|+||||.|+.+....+..+.
T Consensus 2 ~~~t~dG~~l~y~~~G--------~g~~ivlvHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 72 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWG--------QGRPVVFIHGWPLNG-DAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTF 72 (274)
T ss_dssp EEECTTSCEEEEEEEC--------SSSEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHH
T ss_pred eEECcCCCEEEEEEEC--------CCCeEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccchhh
Confidence 5788899999999986 357899999999998 9999999888654 99999999999999988878899999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHh-CCcccceEEEecCCCCCCCcc-------hHH----Hhhhh-----
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARM-WPERVEKVVIASSGVNMKRGD-------NEA----LVKRA----- 170 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~~~~v~~~v~~~~~~~~~~~~-------~~~----~~~~~----- 170 (273)
++++.+++++++.++++++|||+||.+++.++++ .|+++++++++++........ ... +....
T Consensus 73 ~~dl~~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (274)
T d1a8qa_ 73 ADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERS 152 (274)
T ss_dssp HHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhhhhH
Confidence 9999999999999999999999999988886554 588999999998754322111 000 00000
Q ss_pred --hhhhhhhccC------CCChHHHHHHhhhhhccC-----------CCCChhhHHhhhhccEEEEecCCCCCCChHHH-
Q 024042 171 --NLERIDHLML------PESASQLRTLTGLAVSKN-----------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMA- 230 (273)
Q Consensus 171 --~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~- 230 (273)
.......... .................. ........+.++..|+++++|++|.+++.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~ 232 (274)
T d1a8qa_ 153 QFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATG 232 (274)
T ss_dssp HHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTH
T ss_pred HHhhhhhhhhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHHHHhccceeeeeccCCCCCcCHHHHH
Confidence 0000000000 001111111100000000 00011123456677999999999999998754
Q ss_pred HHHHHHhcCCcEEEEeCCCCCCcCc--CChhhHHHHHHHHhcc
Q 024042 231 TELKELLGKKARLEIIENTSHVPQI--ENPGLFNSIVKNFLRG 271 (273)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~i~~fl~~ 271 (273)
+.+.+.+ +++++++++++||+.++ ++|+++.+.|.+||++
T Consensus 233 ~~~~~~~-~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 233 RKSAQII-PNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp HHHHHHS-TTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred HHHHHhC-CCCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 5666777 89999999999998766 5689999999999985
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=1.1e-36 Score=229.49 Aligned_cols=238 Identities=17% Similarity=0.215 Sum_probs=167.2
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhh-cCCCeEEeecCCCCCCCCCCC-ccccH
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFF-APHFNVYVPDLIFFGHSTTRS-IQRTE 104 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l-~~~~~v~~~d~~g~g~s~~~~-~~~~~ 104 (273)
..++++ ||.+++|...| . ..++|+||++||++++. ..|...+..+ .++|+|+++|+||||.|+.+. ..++.
T Consensus 4 ~~~~~~-~g~~i~y~~~g----~-~~~~~~iv~lHG~~g~~-~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 76 (290)
T d1mtza_ 4 ENYAKV-NGIYIYYKLCK----A-PEEKAKLMTMHGGPGMS-HDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTI 76 (290)
T ss_dssp EEEEEE-TTEEEEEEEEC----C-SSCSEEEEEECCTTTCC-SGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSH
T ss_pred cCeEEE-CCEEEEEEEcC----C-CCCCCeEEEECCCCCch-HHHHHHHHHHHHCCCEEEEEeCCCCccccccccccccc
Confidence 467788 99999999987 2 34567899999997777 5565555555 445999999999999998654 35688
Q ss_pred HHHHHHHHHHHHHh-CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch--HHHhhh--------h-hh
Q 024042 105 LFQAASLGKLLEKI-GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN--EALVKR--------A-NL 172 (273)
Q Consensus 105 ~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~--~~~~~~--------~-~~ 172 (273)
+..++++.++++++ +.++++++||||||.+|+.+|.++|++|++++++++......... ...... . ..
T Consensus 77 ~~~~~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (290)
T d1mtza_ 77 DYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKY 156 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred cchhhhhhhhhcccccccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhhhhhhhhhhhHHHHHHHHHh
Confidence 99999999999987 679999999999999999999999999999999987654321100 000000 0 00
Q ss_pred ----------------hhhh-hcc-CC-CChHHHHHHhh---hh----hc-----c----CCCCChhhHHhhhhccEEEE
Q 024042 173 ----------------ERID-HLM-LP-ESASQLRTLTG---LA----VS-----K----NLDIVPDFFFNDFVHDVLIV 217 (273)
Q Consensus 173 ----------------~~~~-~~~-~~-~~~~~~~~~~~---~~----~~-----~----~~~~~~~~~~~~~~~p~l~i 217 (273)
.... ... .. ........... .. .. . ...........++..|++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 236 (290)
T d1mtza_ 157 GSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLIT 236 (290)
T ss_dssp HHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEE
T ss_pred hhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccHHHHhhcccceEEEE
Confidence 0000 000 00 01111110000 00 00 0 00111122345566799999
Q ss_pred ecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcccC
Q 024042 218 WGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 218 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 273 (273)
+|++|.++| +..+.+.+.+ +++++++++++||+++.|+|+++.+.|.+||++++
T Consensus 237 ~G~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~h~ 290 (290)
T d1mtza_ 237 VGEYDEVTP-NVARVIHEKI-AGSELHVFRDCSHLTMWEDREGYNKLLSDFILKHL 290 (290)
T ss_dssp EETTCSSCH-HHHHHHHHHS-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTCC
T ss_pred EeCCCCCCH-HHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHHHhC
Confidence 999998765 6778888888 89999999999999999999999999999999986
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=4e-36 Score=226.15 Aligned_cols=228 Identities=21% Similarity=0.340 Sum_probs=163.3
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHH----HHhhcCCCeEEeecCCCCCCCCCCCcc-ccHHHHH
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQ----VQFFAPHFNVYVPDLIFFGHSTTRSIQ-RTELFQA 108 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~----~~~l~~~~~v~~~d~~g~g~s~~~~~~-~~~~~~~ 108 (273)
++.+|+|...| ++|+|||+||++.+. ..|..+ ...+.++|+|+++|+||||.|..+... ......+
T Consensus 18 ~~~~i~y~~~G--------~G~~ivllHG~~~~~-~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 88 (283)
T d2rhwa1 18 SDFNIHYNEAG--------NGETVIMLHGGGPGA-GGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNA 88 (283)
T ss_dssp EEEEEEEEEEC--------CSSEEEEECCCSTTC-CHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHH
T ss_pred CCEEEEEEEEc--------CCCeEEEECCCCCCh-hHHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhh
Confidence 45679999876 458999999999887 777654 344566799999999999999876543 4666778
Q ss_pred HHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc----hHHHh---hhhh---h----hh
Q 024042 109 ASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD----NEALV---KRAN---L----ER 174 (273)
Q Consensus 109 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~----~~~~~---~~~~---~----~~ 174 (273)
+++.+++++++.++++++|||+||.+|+.++.++|++++++|++++........ ..... .... . ..
T Consensus 89 ~~i~~li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (283)
T d2rhwa1 89 RAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQM 168 (283)
T ss_dssp HHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHH
T ss_pred hhcccccccccccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHHH
Confidence 999999999999999999999999999999999999999999999764332211 00000 0000 0 00
Q ss_pred hhhccC---CCChHHHHHHhh--------------hhhcc-CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHH
Q 024042 175 IDHLML---PESASQLRTLTG--------------LAVSK-NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKEL 236 (273)
Q Consensus 175 ~~~~~~---~~~~~~~~~~~~--------------~~~~~-~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~ 236 (273)
...... ............ ..... .........+.++..|+++++|++|.++|.+..+.+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 248 (283)
T d2rhwa1 169 LQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWN 248 (283)
T ss_dssp HHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHH
T ss_pred HHHhhcccccCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHHHHHHh
Confidence 000000 001111110000 00000 011122233556677999999999999999999999999
Q ss_pred hcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 237 LGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 237 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+ +++++++++++||+++.++|+++++.|.+||++
T Consensus 249 ~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 249 I-DDARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp S-SSEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred C-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 9 899999999999999999999999999999986
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-37 Score=219.96 Aligned_cols=196 Identities=20% Similarity=0.276 Sum_probs=158.5
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHH--HHhhcCC-CeEEeecCCCCCCCCCCCcc-
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQ--VQFFAPH-FNVYVPDLIFFGHSTTRSIQ- 101 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~--~~~l~~~-~~v~~~d~~g~g~s~~~~~~- 101 (273)
+..++++ +|.+++|+..++ ..++.+++|||+||++++. ..|+.+ ++.|++. |+|+++|+||||.|......
T Consensus 7 ~e~~i~v-~G~~i~y~~~~~---~~~~~~~~vvllHG~~~~~-~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~ 81 (208)
T d1imja_ 7 REGTIQV-QGQALFFREALP---GSGQARFSVLLLHGIRFSS-ETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPA 81 (208)
T ss_dssp CCCCEEE-TTEEECEEEEEC---SSSCCSCEEEECCCTTCCH-HHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSS
T ss_pred eEEEEEE-CCEEEEEEEecC---CCCCCCCeEEEECCCCCCh-hHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCccc
Confidence 4557788 999999988762 2346678999999999998 888764 5777776 99999999999999865433
Q ss_pred -ccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccC
Q 024042 102 -RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML 180 (273)
Q Consensus 102 -~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (273)
++....++++.++++.++.++++++||||||.+|+.++.++|++++++|+++|.....
T Consensus 82 ~~~~~~~~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~--------------------- 140 (208)
T d1imja_ 82 PIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK--------------------- 140 (208)
T ss_dssp CTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG---------------------
T ss_pred ccchhhhhhhhhhcccccccccccccccCcHHHHHHHHHHHhhhhcceeeecCcccccc---------------------
Confidence 3444556778889999999999999999999999999999999999999998743211
Q ss_pred CCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhh
Q 024042 181 PESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGL 260 (273)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 260 (273)
........+..|+|+++|++|.++|.+. ...+.+ ++.++.+++++||..+.++|++
T Consensus 141 ---------------------~~~~~~~~i~~P~Lii~G~~D~~~~~~~--~~~~~~-~~~~~~~i~~~gH~~~~~~p~~ 196 (208)
T d1imja_ 141 ---------------------INAANYASVKTPALIVYGDQDPMGQTSF--EHLKQL-PNHRVLIMKGAGHPCYLDKPEE 196 (208)
T ss_dssp ---------------------SCHHHHHTCCSCEEEEEETTCHHHHHHH--HHHTTS-SSEEEEEETTCCTTHHHHCHHH
T ss_pred ---------------------cccccccccccccccccCCcCcCCcHHH--HHHHhC-CCCeEEEECCCCCchhhhCHHH
Confidence 1122344566699999999999887543 344556 8899999999999998999999
Q ss_pred HHHHHHHHhcc
Q 024042 261 FNSIVKNFLRG 271 (273)
Q Consensus 261 ~~~~i~~fl~~ 271 (273)
+.+.+.+||++
T Consensus 197 ~~~~l~~Fl~~ 207 (208)
T d1imja_ 197 WHTGLLDFLQG 207 (208)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999999985
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=3.1e-35 Score=219.95 Aligned_cols=233 Identities=19% Similarity=0.177 Sum_probs=167.8
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
++++.||.+++|...| ++|+|||+||++++. ..|..+++.|.+. |+|+++|+||||.|+.+...++..++
T Consensus 2 ~f~~~dG~~i~y~~~G--------~g~pvvllHG~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 72 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDWG--------SGQPIVFSHGWPLNA-DSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTY 72 (273)
T ss_dssp EEECTTSCEEEEEEES--------CSSEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHH
T ss_pred EEEeeCCcEEEEEEEC--------CCCeEEEECCCCCCH-HHHHHHHHHHHhCCCEEEEEechhcCccccccccccccch
Confidence 5777899999999886 457899999999999 8999999988654 99999999999999988778899999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHH-HHHHHhCCcccceEEEecCCCCCCCcc-------hHHHhh----hhh----
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVA-YHMARMWPERVEKVVIASSGVNMKRGD-------NEALVK----RAN---- 171 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a-~~~a~~~~~~v~~~v~~~~~~~~~~~~-------~~~~~~----~~~---- 171 (273)
++++.+++++++.++.+++|||+||.++ ..++..+|+++++++++++........ ...... ...
T Consensus 73 ~~~~~~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T d1a8sa_ 73 ADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRS 152 (273)
T ss_dssp HHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHHHHHH
Confidence 9999999999999999999999988655 455666799999999998755332111 010000 000
Q ss_pred --hhhh-hhc----c---CCCChHHHHHHhhhhhccC-----------CCCChhhHHhhhhccEEEEecCCCCCCChHHH
Q 024042 172 --LERI-DHL----M---LPESASQLRTLTGLAVSKN-----------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMA 230 (273)
Q Consensus 172 --~~~~-~~~----~---~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~ 230 (273)
.... ... . ................... ..........++..|+++++|++|.++|.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~~~~~~ 232 (273)
T d1a8sa_ 153 QLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEAS 232 (273)
T ss_dssp HHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCSTTT
T ss_pred HHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhHHHHhhccceEEEecCCCCCCCHHHH
Confidence 0000 000 0 0011111111111000000 01112234556677999999999999998877
Q ss_pred HHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 231 TELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
+.+.+.+.++++++++|++||+++.++|+++++.|.+||+
T Consensus 233 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 233 GIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHcC
Confidence 7776655488999999999999999999999999999996
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=8.2e-35 Score=218.06 Aligned_cols=228 Identities=21% Similarity=0.194 Sum_probs=162.8
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHH
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLG 112 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~ 112 (273)
++++|+|...| ++|+|||+||++++. ..|..+++.|.++ |+|+++|+||||.|+.....++.+++++++.
T Consensus 11 ~~v~i~y~~~G--------~G~~ivllHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~ 81 (277)
T d1brta_ 11 TSIDLYYEDHG--------TGQPVVLIHGFPLSG-HSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLN 81 (277)
T ss_dssp EEEEEEEEEEC--------SSSEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred CcEEEEEEEEc--------cCCeEEEECCCCCCH-HHHHHHHHHHHhCCCEEEEEeCCCCCcccccccccchhhhhhhhh
Confidence 45678888875 467899999999999 8999999888655 9999999999999998777789999999999
Q ss_pred HHHHHhCCccEEEEEeccch-HHHHHHHHhCCcccceEEEecCCCCCCCcc--------hHH----Hhhhhh------hh
Q 024042 113 KLLEKIGVERFSVVGTSYGG-FVAYHMARMWPERVEKVVIASSGVNMKRGD--------NEA----LVKRAN------LE 173 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg-~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~--------~~~----~~~~~~------~~ 173 (273)
+++++++.++++++|||||| .++..++..+|++++++|++++........ ... ...... ..
T Consensus 82 ~~l~~l~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (277)
T d1brta_ 82 TVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYT 161 (277)
T ss_dssp HHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHH
T ss_pred hhhhccCcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhhhh
Confidence 99999999999999999996 566667888899999999998754332111 000 000000 00
Q ss_pred h-------hhhccCC-CChHHHHHHhhhhh----------ccCCCCChhhHHhhhhccEEEEecCCCCCCChHH-HHHHH
Q 024042 174 R-------IDHLMLP-ESASQLRTLTGLAV----------SKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKM-ATELK 234 (273)
Q Consensus 174 ~-------~~~~~~~-~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~-~~~~~ 234 (273)
. ....... .............. ...........+.++..|+++++|++|.+++.+. .+.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~ 241 (277)
T d1brta_ 162 GFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFH 241 (277)
T ss_dssp HHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHH
T ss_pred hccccccccchhhhhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCcCHHHHHHHHH
Confidence 0 0000001 11111111110000 0000011122345667799999999999999875 45566
Q ss_pred HHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 235 ELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 235 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+.+ +++++++++++||+++.++|+++.+.|.+||++
T Consensus 242 ~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 242 KAL-PSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp HHC-TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 677 899999999999999999999999999999975
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=9.1e-36 Score=227.47 Aligned_cols=235 Identities=19% Similarity=0.182 Sum_probs=164.5
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc--c
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI--Q 101 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~--~ 101 (273)
.++..+++++||.+++|...| ++++|+|||+||++++. ..|......+.++|+|+++|+||||.|+.+.. .
T Consensus 10 P~~~~~i~~~dg~~i~y~~~G------~~~g~pvvllHG~~g~~-~~~~~~~~~l~~~~~Vi~~D~rG~G~S~~~~~~~~ 82 (313)
T d1azwa_ 10 PYQQGSLKVDDRHTLYFEQCG------NPHGKPVVMLHGGPGGG-CNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVD 82 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEE------CTTSEEEEEECSTTTTC-CCGGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTT
T ss_pred CCCCCEEEeCCCcEEEEEEec------CCCCCEEEEECCCCCCc-cchHHHhHHhhcCCEEEEEeccccCCCCccccccc
Confidence 568899999999999999987 56678899999998887 77777666666679999999999999986433 4
Q ss_pred ccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH-------HHh-------
Q 024042 102 RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE-------ALV------- 167 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~-------~~~------- 167 (273)
++.+++++|+.+++++++.++++|+||||||.+++.+|.++|+++++++++++.......... .+.
T Consensus 83 ~~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (313)
T d1azwa_ 83 NTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHY 162 (313)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccchhhhhhcccchhhhHHHHHH
Confidence 678999999999999999999999999999999999999999999999999886554321100 000
Q ss_pred -hhhhh-------hhhhhccCCCChHH------------------------HHHH-----------hhhh------hccC
Q 024042 168 -KRANL-------ERIDHLMLPESASQ------------------------LRTL-----------TGLA------VSKN 198 (273)
Q Consensus 168 -~~~~~-------~~~~~~~~~~~~~~------------------------~~~~-----------~~~~------~~~~ 198 (273)
..... ......+....... .... .... ....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
T d1azwa_ 163 LNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEV 242 (313)
T ss_dssp HHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSS
T ss_pred HHhhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHHHhhcccccc
Confidence 00000 00000000000000 0000 0000 0000
Q ss_pred CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChh---hHHHHHHHH
Q 024042 199 LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPG---LFNSIVKNF 268 (273)
Q Consensus 199 ~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~---~~~~~i~~f 268 (273)
...........+..|+++++|++|.++|++.++.+.+.+ +++++++++++||+++ +|+ ++.+++.+|
T Consensus 243 ~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~l~~~~-p~a~~~~i~~aGH~~~--ep~~~~~li~a~~~f 312 (313)
T d1azwa_ 243 EDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW-PKAQLQISPASGHSAF--EPENVDALVRATDGF 312 (313)
T ss_dssp TTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHC-TTSEEEEETTCCSSTT--SHHHHHHHHHHHHHH
T ss_pred chhhhHhhhhcCCCCEEEEEECCCCCCCHHHHHHHHHHC-CCCEEEEECCCCCCCC--CchHHHHHHHHHHHh
Confidence 000011122334459999999999999999999999999 9999999999999975 354 445555555
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.3e-34 Score=216.08 Aligned_cols=233 Identities=18% Similarity=0.186 Sum_probs=166.8
Q ss_pred EecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHH
Q 024042 30 IDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQA 108 (273)
Q Consensus 30 ~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~ 108 (273)
+...||.+|+|...| ++|+|||+||++++. ..|..+++.|.+. |+|+++|+||||.|+.+....+.+.++
T Consensus 3 f~~~dG~~l~y~~~G--------~g~~vv~lHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 73 (271)
T d1va4a_ 3 FVAKDGTQIYFKDWG--------SGKPVLFSHGWLLDA-DMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFA 73 (271)
T ss_dssp EECTTSCEEEEEEES--------SSSEEEEECCTTCCG-GGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHH
T ss_pred EEeECCeEEEEEEEc--------CCCeEEEECCCCCCH-HHHHHHHHHHHhCCCEEEEEecccccccccccccccccccc
Confidence 344499999999886 357899999999998 9999999999775 999999999999999888788999999
Q ss_pred HHHHHHHHHhCCccEEEEEeccchHHH-HHHHHhCCcccceEEEecCCCCCCCcc-------hHHHhhhhh---------
Q 024042 109 ASLGKLLEKIGVERFSVVGTSYGGFVA-YHMARMWPERVEKVVIASSGVNMKRGD-------NEALVKRAN--------- 171 (273)
Q Consensus 109 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a-~~~a~~~~~~v~~~v~~~~~~~~~~~~-------~~~~~~~~~--------- 171 (273)
+++.++++.++.++++++|||+||.++ ..++..+|+++.+++++++........ .........
T Consensus 74 ~~~~~~~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (271)
T d1va4a_ 74 DDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQ 153 (271)
T ss_dssp HHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHHHHH
T ss_pred ccceeeeeecCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhhhhhh
Confidence 999999999999999999999988655 556777899999999998765432111 000000000
Q ss_pred -h-----hhhhhccCCCChHHH-HHHhhhhhcc-----------CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHH
Q 024042 172 -L-----ERIDHLMLPESASQL-RTLTGLAVSK-----------NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATEL 233 (273)
Q Consensus 172 -~-----~~~~~~~~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~ 233 (273)
. ............... .......... .........+.++..|+++++|++|.++|.+...++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~ 233 (271)
T d1va4a_ 154 FISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKV 233 (271)
T ss_dssp HHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCGGGTHHH
T ss_pred hhhhhcchhhcccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhhhhcccceeecccCCCCCCCHHHHHHH
Confidence 0 000000000000000 0000000000 000112234556677999999999999998887776
Q ss_pred HHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 234 KELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 234 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+...+++++++++++||+.+.++|+++.+.|.+||++
T Consensus 234 ~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 234 AAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp HHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred HHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 54443899999999999999999999999999999985
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=4.4e-35 Score=219.81 Aligned_cols=227 Identities=22% Similarity=0.238 Sum_probs=162.3
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhh-cCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHH
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFF-APHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGK 113 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l-~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~ 113 (273)
+++|+|...| ++|+|||+||++++. ..|..++..| .++|+|+++|+||||.|+.+...++.+++++++.+
T Consensus 12 ~v~i~y~~~G--------~g~~illlHG~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~di~~ 82 (279)
T d1hkha_ 12 PIELYYEDQG--------SGQPVVLIHGYPLDG-HSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHT 82 (279)
T ss_dssp EEEEEEEEES--------SSEEEEEECCTTCCG-GGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHH
T ss_pred eEEEEEEEEc--------cCCeEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEechhhCCccccccccchhhhhhhhhh
Confidence 3578888876 468899999999998 8999988776 55599999999999999988778899999999999
Q ss_pred HHHHhCCccEEEEEeccch-HHHHHHHHhCCcccceEEEecCCCCCCCcc-------hHHHhhh----hh----------
Q 024042 114 LLEKIGVERFSVVGTSYGG-FVAYHMARMWPERVEKVVIASSGVNMKRGD-------NEALVKR----AN---------- 171 (273)
Q Consensus 114 ~~~~~~~~~i~l~G~S~Gg-~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-------~~~~~~~----~~---------- 171 (273)
++++++.++++++|||||| .++..++..+|+++.+++++++........ ....... ..
T Consensus 83 ~i~~l~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (279)
T d1hkha_ 83 VLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDF 162 (279)
T ss_dssp HHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred hhhhcCcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhhhhh
Confidence 9999999999999999996 666777888899999999998754332211 0000000 00
Q ss_pred ---hhhhhhccCC-CChHHHHHHhhhhhccC------------CCC-ChhhHHhhhhccEEEEecCCCCCCChH-HHHHH
Q 024042 172 ---LERIDHLMLP-ESASQLRTLTGLAVSKN------------LDI-VPDFFFNDFVHDVLIVWGDQDQIFPLK-MATEL 233 (273)
Q Consensus 172 ---~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------~~~-~~~~~~~~~~~p~l~i~g~~D~~~~~~-~~~~~ 233 (273)
.......... ................. ... ........+..|+++++|++|.+++.+ ..+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~ 242 (279)
T d1hkha_ 163 YKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRF 242 (279)
T ss_dssp HHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHH
T ss_pred hhhhcccchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccCHHHHHHHH
Confidence 0000001111 11111111111110000 000 011223455679999999999999865 56777
Q ss_pred HHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 234 KELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 234 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+.+ +++++++++++||+++.++|+++.+.|.+||++
T Consensus 243 ~~~~-p~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 243 HQAV-PEADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp HHHC-TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 8888 899999999999999999999999999999975
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=4.6e-35 Score=223.25 Aligned_cols=241 Identities=18% Similarity=0.263 Sum_probs=172.1
Q ss_pred CCceeEEec---CCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCC
Q 024042 24 GLSSQTIDI---DDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRS 99 (273)
Q Consensus 24 ~~~~~~~~~---~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~ 99 (273)
.++.+++.. .+|.+++|...| + .+..|+|||+||++++. ..|..++..|.+. |+|+++|+||||.|..+.
T Consensus 19 p~~~~~~~~~~~~~g~~~~y~~~G----~-~~~~p~llllHG~~~~~-~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~ 92 (310)
T d1b6ga_ 19 PFSPNYLDDLPGYPGLRAHYLDEG----N-SDAEDVFLCLHGEPTWS-YLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92 (310)
T ss_dssp CCCCEEEESCTTCTTCEEEEEEEE----C-TTCSCEEEECCCTTCCG-GGGTTTHHHHHHTTCEEEEECCTTSTTSCEES
T ss_pred CCCCceeccccCCCCEEEEEEEec----C-CCCCCEEEEECCCCCch-HHHHHHHHHhhccCceEEEeeecCcccccccc
Confidence 355666652 289999999987 2 33568899999999999 9999999888766 999999999999998653
Q ss_pred --ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhh------
Q 024042 100 --IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRAN------ 171 (273)
Q Consensus 100 --~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~------ 171 (273)
..++.+..++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.................
T Consensus 93 ~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (310)
T d1b6ga_ 93 DEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGF 172 (310)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTH
T ss_pred ccccccccccccchhhhhhhccccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhh
Confidence 346999999999999999999999999999999999999999999999999998865433221111100000
Q ss_pred --------------hhhhhhccCCC-ChHHHHHHhhhh---------------hccCCC-------CChhhHHhhhhccE
Q 024042 172 --------------LERIDHLMLPE-SASQLRTLTGLA---------------VSKNLD-------IVPDFFFNDFVHDV 214 (273)
Q Consensus 172 --------------~~~~~~~~~~~-~~~~~~~~~~~~---------------~~~~~~-------~~~~~~~~~~~~p~ 214 (273)
.........+. ............ ...... ........++..|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 252 (310)
T d1b6ga_ 173 TAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQT 252 (310)
T ss_dssp HHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEE
T ss_pred hhhhhhhccchhhhhhhhhhccCccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCe
Confidence 00000000000 011111000000 000000 00011123455699
Q ss_pred EEEecCCCCCCChHHHHHHHHHhcCC-cEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 215 LIVWGDQDQIFPLKMATELKELLGKK-ARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 215 l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
++++|++|.+++++..+.+.+.+ ++ .++++++++||+++.++|+.+.+.|.+||++
T Consensus 253 l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 253 FMAIGMKDKLLGPDVMYPMKALI-NGCPEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp EEEEETTCSSSSHHHHHHHHHHS-TTCCCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCCCCCHHHHHHHHHhc-CCCccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence 99999999999999999999888 55 4788899999999989999999999999985
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.8e-34 Score=211.24 Aligned_cols=220 Identities=22% Similarity=0.255 Sum_probs=151.8
Q ss_pred EEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH
Q 024042 38 LHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK 117 (273)
Q Consensus 38 l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~ 117 (273)
|+|...| .++++|||+||++++. ..|..+++.|+++|+|+++|+||||.|+... ..+..+ +.+.+..
T Consensus 2 i~y~~~G-------~g~~~lvllHG~~~~~-~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~-~~~~~d----~~~~~~~ 68 (256)
T d1m33a_ 2 IWWQTKG-------QGNVHLVLLHGWGLNA-EVWRCIDEELSSHFTLHLVDLPGFGRSRGFG-ALSLAD----MAEAVLQ 68 (256)
T ss_dssp CCEEEEC-------CCSSEEEEECCTTCCG-GGGGGTHHHHHTTSEEEEECCTTSTTCCSCC-CCCHHH----HHHHHHT
T ss_pred eEEEEEC-------CCCCeEEEECCCCCCH-HHHHHHHHHHhCCCEEEEEeCCCCCCccccc-cccccc----ccccccc
Confidence 4566664 3457899999999998 8999999999988999999999999998543 334433 3344445
Q ss_pred hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc-----hHHHhhhh----h---hhhh-----hhccC
Q 024042 118 IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD-----NEALVKRA----N---LERI-----DHLML 180 (273)
Q Consensus 118 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-----~~~~~~~~----~---~~~~-----~~~~~ 180 (273)
...++++++||||||.+++.+|.++|+++++++++++........ ........ . .... .....
T Consensus 69 ~~~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (256)
T d1m33a_ 69 QAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMG 148 (256)
T ss_dssp TSCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred ccccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhhhhhcc
Confidence 567899999999999999999999999999999998654332211 00000000 0 0000 00111
Q ss_pred CCChHHHHHHhhhhhccCCC---------------CChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEE
Q 024042 181 PESASQLRTLTGLAVSKNLD---------------IVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEI 245 (273)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (273)
.................... ......+.++.+|+++++|++|.++|.+..+.+.+.+ +++++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~~~~-~~~~~~~ 227 (256)
T d1m33a_ 149 TETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYI 227 (256)
T ss_dssp STTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTC-TTCEEEE
T ss_pred ccchhhHHHHHHHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHHHHHHC-CCCEEEE
Confidence 11111111111111100000 0111233556679999999999999999999998888 8999999
Q ss_pred eCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 246 IENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 246 ~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
++++||++++|+|+++++.|.+||++
T Consensus 228 i~~~gH~~~~e~p~~~~~~l~~fl~~ 253 (256)
T d1m33a_ 228 FAKAAHAPFISHPAEFCHLLVALKQR 253 (256)
T ss_dssp ETTCCSCHHHHSHHHHHHHHHHHHTT
T ss_pred ECCCCCchHHHCHHHHHHHHHHHHHH
Confidence 99999999999999999999999986
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=6.9e-33 Score=204.74 Aligned_cols=217 Identities=15% Similarity=0.130 Sum_probs=156.7
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-cccHHHHHHHHHHHHHHhCC-ccEEEEEecc
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QRTELFQAASLGKLLEKIGV-ERFSVVGTSY 130 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~ 130 (273)
+++|||+||++++. ..|+.+++.|+++ |+|+++|+||||.|+.+.. .++..+.++++..+++.... ++++++|||+
T Consensus 2 G~~vvllHG~~~~~-~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvghS~ 80 (258)
T d1xkla_ 2 GKHFVLVHGACHGG-WSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHSL 80 (258)
T ss_dssp CCEEEEECCTTCCG-GGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSSSCEEEEEETT
T ss_pred CCcEEEECCCCCCH-HHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhcccccccccccccch
Confidence 57999999999998 9999999999876 9999999999999986544 46888888999888888765 6899999999
Q ss_pred chHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh-hhh----------------------------hhccCC
Q 024042 131 GGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL-ERI----------------------------DHLMLP 181 (273)
Q Consensus 131 Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~----------------------------~~~~~~ 181 (273)
||.+++.++.++|++++++|++++.................. ... ......
T Consensus 81 Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (258)
T d1xkla_ 81 GGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQ 160 (258)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHTST
T ss_pred hHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHHHHHHhhh
Confidence 999999999999999999999998665433321111111100 000 000000
Q ss_pred CChHHHHHHhhhhhccCCCC-------ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcC
Q 024042 182 ESASQLRTLTGLAVSKNLDI-------VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQ 254 (273)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 254 (273)
.................... ........+..|+++++|++|.++|.+..+.+.+.+ +++++++++++||+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~ 239 (258)
T d1xkla_ 161 LCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI-GVTEAIEIKGADHMAM 239 (258)
T ss_dssp TSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHH-CCSEEEEETTCCSCHH
T ss_pred cccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHC-CCCEEEEECCCCCchH
Confidence 00000000000000000000 000112334559999999999999999999999999 8999999999999999
Q ss_pred cCChhhHHHHHHHHhccc
Q 024042 255 IENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 255 ~~~~~~~~~~i~~fl~~~ 272 (273)
+++|+++++.|.+|+++.
T Consensus 240 ~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 240 LCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp HHSHHHHHHHHHHHHHHC
T ss_pred HhCHHHHHHHHHHHHHhc
Confidence 999999999999999874
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=6.1e-33 Score=209.50 Aligned_cols=233 Identities=14% Similarity=0.146 Sum_probs=158.3
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcc----
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ---- 101 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~---- 101 (273)
+.+++++ +|.+++|...| ++|+|||+||++++. ..|..+++.|+++|+|+++|+||||.|......
T Consensus 9 ~~~fi~~-~g~~i~y~~~G--------~g~~vvllHG~~~~~-~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~ 78 (298)
T d1mj5a_ 9 EKKFIEI-KGRRMAYIDEG--------TGDPILFQHGNPTSS-YLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPER 78 (298)
T ss_dssp CCEEEEE-TTEEEEEEEES--------CSSEEEEECCTTCCG-GGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTS
T ss_pred CCEEEEE-CCEEEEEEEEc--------CCCcEEEECCCCCCH-HHHHHHHHHHhcCCEEEEEeCCCCCCCCCCccccccc
Confidence 5678888 99999999986 458999999999998 999999999998899999999999999866543
Q ss_pred ccHHHHHHHHHHHHHH-hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch-----HHHhhhhh----
Q 024042 102 RTELFQAASLGKLLEK-IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN-----EALVKRAN---- 171 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~-----~~~~~~~~---- 171 (273)
.......+++..++.. .+.++++++|||+||.+++.++.++|+++.+++++++......... ........
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (298)
T d1mj5a_ 79 YAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAG 158 (298)
T ss_dssp SCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTH
T ss_pred cccchhhhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhhhhhhhhhh
Confidence 2344455555555544 4568999999999999999999999999999999987654332210 00000000
Q ss_pred -----------hhhhhhcc-CCCChHHHHHHhhhhh--------------c-cCCCCC---------hhhHHhhhhccEE
Q 024042 172 -----------LERIDHLM-LPESASQLRTLTGLAV--------------S-KNLDIV---------PDFFFNDFVHDVL 215 (273)
Q Consensus 172 -----------~~~~~~~~-~~~~~~~~~~~~~~~~--------------~-~~~~~~---------~~~~~~~~~~p~l 215 (273)
........ ................ . ...... .......+..|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 238 (298)
T d1mj5a_ 159 EELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKL 238 (298)
T ss_dssp HHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEE
T ss_pred hhhhhhhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhhhhhhhhhhhcceeEE
Confidence 00000000 0111111111100000 0 000000 0112334555999
Q ss_pred EEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 216 IVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 216 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+++|++|.+.+ ...+.+.+.+ ++.++++++ +||+++.|+|+++.+.|.+||++
T Consensus 239 ~i~g~~d~~~~-~~~~~~~~~~-p~~~~~~~~-~GH~~~~e~P~~v~~~i~~fl~~ 291 (298)
T d1mj5a_ 239 FINAEPGALTT-GRMRDFCRTW-PNQTEITVA-GAHFIQEDSPDEIGAAIAAFVRR 291 (298)
T ss_dssp EEEEEECSSSS-HHHHHHHTTC-SSEEEEEEE-ESSCGGGTCHHHHHHHHHHHHHH
T ss_pred EEecCCCCcCh-HHHHHHHHHC-CCCEEEEeC-CCCchHHhCHHHHHHHHHHHHhh
Confidence 99999998765 4567777777 788877664 79999999999999999999986
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=6.1e-33 Score=205.13 Aligned_cols=214 Identities=19% Similarity=0.157 Sum_probs=154.7
Q ss_pred eEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-cccHHHHHHHHHHHHHHhC-CccEEEEEeccch
Q 024042 56 SLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QRTELFQAASLGKLLEKIG-VERFSVVGTSYGG 132 (273)
Q Consensus 56 ~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg 132 (273)
-.||+||++++. ..|+.+++.|++. |+|+++|+||||.|+.+.. .++.+++++++.++++... .++++++|||+||
T Consensus 4 ~~vliHG~~~~~-~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lvGhS~Gg 82 (256)
T d3c70a1 4 HFVLIHTICHGA-WIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGG 82 (256)
T ss_dssp EEEEECCTTCCG-GGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHSCTTCCEEEEEETTHH
T ss_pred cEEEeCCCCCCH-HHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhhccccceeecccchHH
Confidence 368999999998 9999999999876 9999999999999986643 4688999999999988875 5889999999999
Q ss_pred HHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh---------------------------hhhhhccCCCChH
Q 024042 133 FVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL---------------------------ERIDHLMLPESAS 185 (273)
Q Consensus 133 ~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~ 185 (273)
.+++.++.++|++++++|++++.................. .............
T Consensus 83 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (256)
T d3c70a1 83 LNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGP 162 (256)
T ss_dssp HHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTSCH
T ss_pred HHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhhhhhhcch
Confidence 9999999999999999999997654443322111111100 0000000000000
Q ss_pred HHHHHhhhhhccCCCC--------ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCC
Q 024042 186 QLRTLTGLAVSKNLDI--------VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIEN 257 (273)
Q Consensus 186 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 257 (273)
..... .......... ...........|+++++|++|..+|++..+.+.+.+ ++.++++++++||++++++
T Consensus 163 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~agH~~~~e~ 240 (256)
T d3c70a1 163 EEYEL-AKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENY-KPDKVYKVEGGDHKLQLTK 240 (256)
T ss_dssp HHHHH-HHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHS-CCSEEEECCSCCSCHHHHS
T ss_pred hhHHH-hhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHC-CCCEEEEECCCCCchHHhC
Confidence 00000 0000000000 000112233459999999999999999999999999 8999999999999999999
Q ss_pred hhhHHHHHHHHhccc
Q 024042 258 PGLFNSIVKNFLRGS 272 (273)
Q Consensus 258 ~~~~~~~i~~fl~~~ 272 (273)
|+++++.|.+|+++.
T Consensus 241 P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 241 TKEIAEILQEVADTY 255 (256)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998763
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=6.3e-33 Score=210.77 Aligned_cols=233 Identities=21% Similarity=0.188 Sum_probs=164.9
Q ss_pred hCCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-
Q 024042 22 SAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI- 100 (273)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~- 100 (273)
...++..+++++||.+|+|...| ++++|+|||+||++++. ..|..+...|+++|+|+++|+||+|.|.....
T Consensus 8 ~~p~~~~~v~~~dG~~i~y~~~G------~~~g~pvvllHG~~~~~-~~w~~~~~~l~~~~~vi~~D~rG~G~S~~~~~~ 80 (313)
T d1wm1a_ 8 LAAYDSGWLDTGDGHRIYWELSG------NPNGKPAVFIHGGPGGG-ISPHHRQLFDPERYKVLLFDQRGCGRSRPHASL 80 (313)
T ss_dssp CCCSEEEEEECSSSCEEEEEEEE------CTTSEEEEEECCTTTCC-CCGGGGGGSCTTTEEEEEECCTTSTTCBSTTCC
T ss_pred CCCCcCCEEEeCCCcEEEEEEec------CCCCCeEEEECCCCCcc-cchHHHHHHhhcCCEEEEEeCCCcccccccccc
Confidence 35678889999999999999998 45678999999999998 89999998888889999999999999975543
Q ss_pred -cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHH-------------
Q 024042 101 -QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL------------- 166 (273)
Q Consensus 101 -~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~------------- 166 (273)
.++....++++..++++++..+++++|||+||.++..++..+|+++.+++++++............
T Consensus 81 ~~~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (313)
T d1wm1a_ 81 DNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWE 160 (313)
T ss_dssp TTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHH
T ss_pred cccchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccccccccchhhhhhhh
Confidence 457888999999999999999999999999999999999999999999999987654321100000
Q ss_pred --hhhhhh-------hhhhhccCCCChHHHH--------------------------------H--------Hhhhhhcc
Q 024042 167 --VKRANL-------ERIDHLMLPESASQLR--------------------------------T--------LTGLAVSK 197 (273)
Q Consensus 167 --~~~~~~-------~~~~~~~~~~~~~~~~--------------------------------~--------~~~~~~~~ 197 (273)
...... ................ . ........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
T d1wm1a_ 161 RVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLE 240 (313)
T ss_dssp HHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCS
T ss_pred hhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhhhhhhhhhhhhcccc
Confidence 000000 0000000000000000 0 00000000
Q ss_pred CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHH
Q 024042 198 NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSI 264 (273)
Q Consensus 198 ~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 264 (273)
............+..|+++++|++|.++|.+.++.+.+.+ +++++++++++||.+ ++|+.+.+.
T Consensus 241 ~~~~~~~~~~~~~~~Pvlii~G~~D~~~p~~~~~~l~~~~-p~a~~~~i~~aGH~~--~eP~~~~~l 304 (313)
T d1wm1a_ 241 SDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW-PEAELHIVEGAGHSY--DEPGILHQL 304 (313)
T ss_dssp STTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHC-TTSEEEEETTCCSST--TSHHHHHHH
T ss_pred cchhhhhhhhhhCCCCEEEEEECCCCccCHHHHHHHHHHC-CCCEEEEECCCCCCc--CCchHHHHH
Confidence 0011112223345569999999999999999999999999 999999999999974 357655443
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.98 E-value=7.3e-31 Score=198.24 Aligned_cols=230 Identities=13% Similarity=0.163 Sum_probs=152.8
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCC-CCCCCCCcc
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFF-GHSTTRSIQ 101 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-g~s~~~~~~ 101 (273)
....+.+++.||.++++|.+.|+.. ...++++||++||++++. ..|..+++.|.++ |+|+++|+||| |.|.+....
T Consensus 3 ~~~~h~~~~~dg~~l~~w~~~p~~~-~~~~~~~Vvi~HG~~~~~-~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~ 80 (302)
T d1thta_ 3 KTIAHVLRVNNGQELHVWETPPKEN-VPFKNNTILIASGFARRM-DHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDE 80 (302)
T ss_dssp SCEEEEEEETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCGGG-GGGHHHHHHHHTTTCCEEEECCCBCC--------C
T ss_pred eeeeeEEEcCCCCEEEEEEecCcCC-CCCCCCEEEEeCCCcchH-HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccC
Confidence 4456788999999999999875442 234578999999999998 8899999999987 99999999998 888877667
Q ss_pred ccHHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhh----h
Q 024042 102 RTELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE----R 174 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~----~ 174 (273)
++..+..+|+..+++.+ +.++++++||||||.+|+.+|.. .+++++|+.+|.......... ........ .
T Consensus 81 ~~~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~~~~~~-~~~~~~~~~~~~~ 157 (302)
T d1thta_ 81 FTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLRDTLEK-ALGFDYLSLPIDE 157 (302)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHHHHHHH-HHSSCGGGSCGGG
T ss_pred CCHHHHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHHHHHHH-HHhhccchhhhhh
Confidence 77777777777666665 56899999999999999998875 348999998876654221111 11000000 0
Q ss_pred hhhccC-CCChHHHHHHhhhhhccCCCC--ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCCCC
Q 024042 175 IDHLML-PESASQLRTLTGLAVSKNLDI--VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTS 250 (273)
Q Consensus 175 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~g 250 (273)
...... ..................... .......++..|+|+++|++|.++|.+.++.+++.++ +++++++++|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~ 237 (302)
T d1thta_ 158 LPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSS 237 (302)
T ss_dssp CCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCC
T ss_pred ccccccccccchhhHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEecCCC
Confidence 000000 000000111111111111111 1233456677799999999999999999999999883 578999999999
Q ss_pred CCcCcCChh
Q 024042 251 HVPQIENPG 259 (273)
Q Consensus 251 H~~~~~~~~ 259 (273)
|.+. +++.
T Consensus 238 H~l~-e~~~ 245 (302)
T d1thta_ 238 HDLG-ENLV 245 (302)
T ss_dssp SCTT-SSHH
T ss_pred cccc-cChH
Confidence 9864 5554
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.97 E-value=2.1e-30 Score=189.43 Aligned_cols=216 Identities=14% Similarity=0.146 Sum_probs=143.8
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHH---HHHHHHHhCCccEEEEE
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAAS---LGKLLEKIGVERFSVVG 127 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~l~G 127 (273)
+++++|||+||++++. ..|..+++.|++. |+|+++|+||||.|..........+..++ +...++..+.++++++|
T Consensus 9 ~~~~~vvliHG~~~~~-~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 87 (242)
T d1tqha_ 9 AGERAVLLLHGFTGNS-ADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAVAG 87 (242)
T ss_dssp CSSCEEEEECCTTCCT-HHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred CCCCeEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEeCCCCccccccccccchhHHHHHHHHHHhhhhhcccCceEEEE
Confidence 4567899999999999 8999999999876 99999999999998755444444444443 44445566779999999
Q ss_pred eccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCC------
Q 024042 128 TSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDI------ 201 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 201 (273)
||+||.+++.++.++|. ...++++++....................... ......................
T Consensus 88 ~S~Gg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (242)
T d1tqha_ 88 LSLGGVFSLKLGYTVPI--EGIVTMCAPMYIKSEETMYEGVLEYAREYKKR-EGKSEEQIEQEMEKFKQTPMKTLKALQE 164 (242)
T ss_dssp ETHHHHHHHHHHTTSCC--SCEEEESCCSSCCCHHHHHHHHHHHHHHHHHH-HTCCHHHHHHHHHHHTTSCCTTHHHHHH
T ss_pred cchHHHHhhhhcccCcc--cccccccccccccchhHHHHHHHHHHHHHhhh-ccchhhhHHHHHhhhhhhccchhhcccc
Confidence 99999999999999875 34555555544332211100000000000000 0111111111111111000000
Q ss_pred ---ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCCCCCCcCcC-ChhhHHHHHHHHhcc
Q 024042 202 ---VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTSHVPQIE-NPGLFNSIVKNFLRG 271 (273)
Q Consensus 202 ---~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 271 (273)
........+..|+|+++|++|..+|.+.++.+.+.+. +++++++++++||+.+.+ +++++.+.|.+||++
T Consensus 165 ~~~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~Fl~~ 239 (242)
T d1tqha_ 165 LIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLES 239 (242)
T ss_dssp HHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHH
T ss_pred cccccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHh
Confidence 1112234455699999999999999999999999883 678999999999998876 589999999999975
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.97 E-value=1.2e-30 Score=193.20 Aligned_cols=223 Identities=19% Similarity=0.162 Sum_probs=140.8
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccc-cHHHHHHHHH
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQR-TELFQAASLG 112 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~-~~~~~~~~~~ 112 (273)
+.+++|... .+++|+|||+||++++. ..|..+++.|++. |+|+++|+||||.|....... .......+..
T Consensus 4 ~~~lh~~~~-------~~~~P~ivllHG~~~~~-~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~ 75 (264)
T d1r3da_ 4 SNQLHFAKP-------TARTPLVVLVHGLLGSG-ADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQT 75 (264)
T ss_dssp CEEEESSCC-------BTTBCEEEEECCTTCCG-GGGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHH
T ss_pred CCeEEEcCC-------CCCCCeEEEeCCCCCCH-HHHHHHHHHHHhCCCEEEEEecccccccccccccccchhhhhhhhc
Confidence 456787665 45678999999999998 9999999999875 999999999999998665433 2222233333
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhh-h-hh-------------h----h
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVK-R-AN-------------L----E 173 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~-~-~~-------------~----~ 173 (273)
......+.++++++|||+||.+|+.++.++|+.+.+++++.+.............. . .. . .
T Consensus 76 ~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
T d1r3da_ 76 VQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSD 155 (264)
T ss_dssp HHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred ccccccccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 33333455789999999999999999999999998888776544332221100000 0 00 0 0
Q ss_pred hhhhc-cCCCChHHHHHHhhhh--------------hccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc
Q 024042 174 RIDHL-MLPESASQLRTLTGLA--------------VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG 238 (273)
Q Consensus 174 ~~~~~-~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~ 238 (273)
..... ................ ............+..+..|+++++|++|..+ ..+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~-----~~~~~~-- 228 (264)
T d1r3da_ 156 WYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAES-- 228 (264)
T ss_dssp HTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH-----HHHHHH--
T ss_pred hhhhhhhcccchHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHH-----HHHHhc--
Confidence 00000 0011111111110000 0000111223345566779999999999542 333333
Q ss_pred CCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 239 KKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 239 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
++.++++++++||+++.|+|+++.+.|.+||++.
T Consensus 229 ~~~~~~~i~~~gH~~~~e~P~~~~~~i~~fl~~l 262 (264)
T d1r3da_ 229 SGLSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp HCSEEEEETTCCSCHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCchHHHCHHHHHHHHHHHHHhc
Confidence 5899999999999999999999999999999863
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.97 E-value=1.2e-30 Score=203.67 Aligned_cols=247 Identities=13% Similarity=0.119 Sum_probs=159.4
Q ss_pred CCCceeEEecCCcceEEeec--CCccCCCCCCCCCeEEEEcCCCCchhHhHH------HHHHhhcCC-CeEEeecCCCCC
Q 024042 23 AGLSSQTIDIDDETTLHFWG--PKLEDDHKTLKKPSLVLIHGFGPEAIWQWR------KQVQFFAPH-FNVYVPDLIFFG 93 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~--~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~------~~~~~l~~~-~~v~~~d~~g~g 93 (273)
...+.+.++++||..|..+. +++......+++|+||++||+++++ ..|. .++..|.++ |+|+++|+||||
T Consensus 25 y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~-~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G 103 (377)
T d1k8qa_ 25 YPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASA-TNWISNLPNNSLAFILADAGYDVWLGNSRGNT 103 (377)
T ss_dssp CCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCG-GGGSSSCTTTCHHHHHHHTTCEEEECCCTTST
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccch-hHHhhcCccchHHHHHHHCCCEEEEEcCCCCC
Confidence 34578899999998775543 3322334466789999999999988 7774 356667666 999999999999
Q ss_pred CCCCCCcc---------c-----cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC
Q 024042 94 HSTTRSIQ---------R-----TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK 159 (273)
Q Consensus 94 ~s~~~~~~---------~-----~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~ 159 (273)
.|..+... . ...+..+.+..+++..+.++++++||||||.+++.++..+|+.+++++++.......
T Consensus 104 ~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~~~~~ 183 (377)
T d1k8qa_ 104 WARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVA 183 (377)
T ss_dssp TSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCS
T ss_pred CCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeeccccc
Confidence 99754321 1 233456677777888899999999999999999999999999888877765432211
Q ss_pred C---cc--hHHHh-------hhhh----------hh--hhhhccC-----------------------------------
Q 024042 160 R---GD--NEALV-------KRAN----------LE--RIDHLML----------------------------------- 180 (273)
Q Consensus 160 ~---~~--~~~~~-------~~~~----------~~--~~~~~~~----------------------------------- 180 (273)
. .. ..... .... .. .......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (377)
T d1k8qa_ 184 TVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHN 263 (377)
T ss_dssp CCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTC
T ss_pred cccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCcccccHHHhhhhhhcc
Confidence 1 00 00000 0000 00 0000000
Q ss_pred --CCChHHHHHHhhhhhcc---C--------------CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC-
Q 024042 181 --PESASQLRTLTGLAVSK---N--------------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK- 240 (273)
Q Consensus 181 --~~~~~~~~~~~~~~~~~---~--------------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~- 240 (273)
.........+....... . ....+...+.++..|+|+++|++|.+++++.++.+.+.+ ++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~~~~l~~~l-p~~ 342 (377)
T d1k8qa_ 264 PAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKL-PNL 342 (377)
T ss_dssp CCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTC-TTE
T ss_pred cccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCHHHHHHHHHHC-CCC
Confidence 00000000000000000 0 000111124566779999999999999999999999999 55
Q ss_pred cEEEEeCCCCCCcC---cCChhhHHHHHHHHhcc
Q 024042 241 ARLEIIENTSHVPQ---IENPGLFNSIVKNFLRG 271 (273)
Q Consensus 241 ~~~~~~~~~gH~~~---~~~~~~~~~~i~~fl~~ 271 (273)
.+.++++++||+.+ .+.++++.+.|.+||++
T Consensus 343 ~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 343 IYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp EEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred eEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 47888999999732 35688999999999986
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.97 E-value=4.4e-30 Score=201.39 Aligned_cols=240 Identities=13% Similarity=0.099 Sum_probs=166.3
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-------CeEEeecCCCCCCCC
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-------FNVYVPDLIFFGHST 96 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-------~~v~~~d~~g~g~s~ 96 (273)
.+....+++ ||.+|||.... .+.++.++|||+||++++. ..|+.+++.|++. |+|+++|+||||.|+
T Consensus 81 ~~~~f~~~i-~G~~iHf~h~~----~~~~~~~pLlLlHG~P~s~-~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~ 154 (394)
T d1qo7a_ 81 SFPQFTTEI-EGLTIHFAALF----SEREDAVPIALLHGWPGSF-VEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSS 154 (394)
T ss_dssp TSCEEEEEE-TTEEEEEEEEC----CSCTTCEEEEEECCSSCCG-GGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSC
T ss_pred cCCCeEEEE-CCEEEEEEEEe----ccCCCCCEEEEeccccccH-HHHHHHHHhhccccCCcccceeeecccccccCCCC
Confidence 466666777 99999998665 4466788999999999999 9999999999764 899999999999998
Q ss_pred CCC--ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch---------HH
Q 024042 97 TRS--IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN---------EA 165 (273)
Q Consensus 97 ~~~--~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~---------~~ 165 (273)
.+. ..++....++++..+++.++.++.+++|||+||.++..++..+|+.+.+++++........... ..
T Consensus 155 ~P~~~~~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 234 (394)
T d1qo7a_ 155 GPPLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKE 234 (394)
T ss_dssp CCCSSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSCCGGGSCHHHHH
T ss_pred CCCCCCccCHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeeecccccccccccccchhhhHH
Confidence 764 3578999999999999999999999999999999999999999999999988876544322110 00
Q ss_pred Hhhhhhh-----------------------------------hhhhhcc-CCCChHHHHHHhhhhhccC-----------
Q 024042 166 LVKRANL-----------------------------------ERIDHLM-LPESASQLRTLTGLAVSKN----------- 198 (273)
Q Consensus 166 ~~~~~~~-----------------------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~----------- 198 (273)
....... ....... .......+.......+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~ 314 (394)
T d1qo7a_ 235 GIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYRE 314 (394)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTCHHHHGGGHHH
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcccccCCHHHHHHHHHHHhhccccchhHHHHHH
Confidence 0000000 0000000 0011111111110000000
Q ss_pred ----CC----CChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 199 ----LD----IVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 199 ----~~----~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.. .........+..|+++++|.+|...+++ .+.+.+....++..++++||+.+.|+|+++++.|.+||+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~---~~~~~~~~~~~~~~~~~~GHf~~~E~Pe~~a~~I~~Fl~ 391 (394)
T d1qo7a_ 315 TTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPR---SWIATTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVE 391 (394)
T ss_dssp HCC---------CTTTTTCEEEEEEEEECTBSSSCCCH---HHHGGGEEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHH
T ss_pred HhhcccccchhhhhccCCcccCCeEEEEeCCCccccHH---HHHHhccCceEEEEcCCcCCchHHhCHHHHHHHHHHHHH
Confidence 00 0000112235569999999999877654 345555233567789999999999999999999999998
Q ss_pred cc
Q 024042 271 GS 272 (273)
Q Consensus 271 ~~ 272 (273)
+.
T Consensus 392 ~v 393 (394)
T d1qo7a_ 392 QV 393 (394)
T ss_dssp HH
T ss_pred Hh
Confidence 74
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.97 E-value=1.3e-28 Score=190.17 Aligned_cols=232 Identities=14% Similarity=0.098 Sum_probs=156.9
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-c
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-Q 101 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~ 101 (273)
.++...|.. +|.+|..+...| ...++.|+||++||+.++. +.+..+...|.++ |.|+++|+||+|.|..... .
T Consensus 105 ~~e~v~ip~-dg~~l~g~l~~P---~~~~~~P~Vi~~hG~~~~~-e~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~ 179 (360)
T d2jbwa1 105 PAERHELVV-DGIPMPVYVRIP---EGPGPHPAVIMLGGLESTK-EESFQMENLVLDRGMATATFDGPGQGEMFEYKRIA 179 (360)
T ss_dssp CEEEEEEEE-TTEEEEEEEECC---SSSCCEEEEEEECCSSCCT-TTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSC
T ss_pred CeEEeecCc-CCcccceEEEec---CCCCCceEEEEeCCCCccH-HHHHHHHHHHHhcCCEEEEEccccccccCcccccc
Confidence 344555555 888998877653 2345678999999998887 7777777777766 9999999999999875443 2
Q ss_pred ccHHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhc
Q 024042 102 RTELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHL 178 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (273)
.+.+...+.+.+++... +.++|+++||||||.+|+.+|...| +++++|.+++.............. ...+...
T Consensus 180 ~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~~~~~~---~~~~~~~ 255 (360)
T d2jbwa1 180 GDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDLETPLT---KESWKYV 255 (360)
T ss_dssp SCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGGSCHHH---HHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHHhhhhhhh---hHHHHHh
Confidence 34555566666666554 3478999999999999999999887 599999998876654221100000 0001111
Q ss_pred cCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCCCCCCcCcCC
Q 024042 179 MLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTSHVPQIEN 257 (273)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~ 257 (273)
................ ........++.+|+|+++|++|. +|.+.++.+++.++ .+.+++++++++|.. ..+
T Consensus 256 ~~~~~~~~~~~~~~~~------~~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~-~~~ 327 (360)
T d2jbwa1 256 SKVDTLEEARLHVHAA------LETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNL 327 (360)
T ss_dssp TTCSSHHHHHHHHHHH------TCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGG
T ss_pred ccCCchHHHHHHHHhh------cchhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEECCCCcCC-CcC
Confidence 1111111111111111 11223456778899999999998 58999999999883 356778889999965 355
Q ss_pred hhhHHHHHHHHhccc
Q 024042 258 PGLFNSIVKNFLRGS 272 (273)
Q Consensus 258 ~~~~~~~i~~fl~~~ 272 (273)
+.+..+.+.+||.+.
T Consensus 328 ~~~~~~~i~dWl~~~ 342 (360)
T d2jbwa1 328 GIRPRLEMADWLYDV 342 (360)
T ss_dssp TTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 667778888888764
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.8e-30 Score=191.20 Aligned_cols=101 Identities=16% Similarity=0.188 Sum_probs=90.9
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcC---CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEecc
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAP---HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSY 130 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~---~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~ 130 (273)
.|+|||+||++++. ..|..+++.|.+ +|+|+++|+||||.|..+ ..++.+++++++.++++.++ ++++|+||||
T Consensus 2 ~~PvvllHG~~~~~-~~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~-~~~~~~~~~~~l~~~l~~l~-~~~~lvGhS~ 78 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSS-YSFRHLLEYINETHPGTVVTVLDLFDGRESLRP-LWEQVQGFREAVVPIMAKAP-QGVHLICYSQ 78 (268)
T ss_dssp CCCEEEECCTTCCG-GGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSC-HHHHHHHHHHHHHHHHHHCT-TCEEEEEETH
T ss_pred CCCEEEECCCCCCH-HHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCc-cccCHHHHHHHHHHHHhccC-CeEEEEcccc
Confidence 56799999999999 999999999875 499999999999999855 45788899999999999998 9999999999
Q ss_pred chHHHHHHHHhCCc-ccceEEEecCCCC
Q 024042 131 GGFVAYHMARMWPE-RVEKVVIASSGVN 157 (273)
Q Consensus 131 Gg~~a~~~a~~~~~-~v~~~v~~~~~~~ 157 (273)
||.+|+.+|.++|+ +|+++|+++++..
T Consensus 79 GG~ia~~~a~~~p~~~v~~lvl~~~~~~ 106 (268)
T d1pjaa_ 79 GGLVCRALLSVMDDHNVDSFISLSSPQM 106 (268)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEEESCCTT
T ss_pred HHHHHHHHHHHCCccccceEEEECCCCc
Confidence 99999999999998 6999999987554
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.96 E-value=2.8e-27 Score=168.24 Aligned_cols=196 Identities=15% Similarity=0.078 Sum_probs=136.8
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCC---CCch-hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGF---GPEA-IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ 101 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~---~~~~-~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~ 101 (273)
.-+|+.++| ++......+++ ......+++|++|+. |++. ...+..+++.|.+. |.|+.+|+||+|.|......
T Consensus 10 ~l~i~gp~G-~l~~~~~~p~~-~~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~~ 87 (218)
T d2fuka1 10 ALTLDGPVG-PLDVAVDLPEP-DVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDH 87 (218)
T ss_dssp EEEEEETTE-EEEEEEECCCT-TSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCT
T ss_pred EEEEeCCCc-cEEEEEEcCCC-CCCCCCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccCc
Confidence 345555677 45444433211 122334567888843 3332 13456788888887 99999999999999876442
Q ss_pred ccHHHHHHHHHHHHH----HhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhh
Q 024042 102 RTELFQAASLGKLLE----KIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDH 177 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~----~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (273)
. ....+|+.++++ ....++++++||||||.+++.++.+. .++++|+++|+......
T Consensus 88 ~--~~~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~~~---------------- 147 (218)
T d2fuka1 88 G--DGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWDF---------------- 147 (218)
T ss_dssp T--THHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBCC----------------
T ss_pred C--cchHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc--ccceEEEeCCcccchhh----------------
Confidence 2 223344444333 34568899999999999999998874 48899999986432100
Q ss_pred ccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCC
Q 024042 178 LMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIEN 257 (273)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 257 (273)
. .....+|+|+|+|++|.++|.+.++++.+.+....+++++|+++|++. .+
T Consensus 148 -------------------~---------~~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H~f~-~~ 198 (218)
T d2fuka1 148 -------------------S---------DVQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFH-RK 198 (218)
T ss_dssp -------------------T---------TCCCCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCT-TC
T ss_pred -------------------h---------ccccccceeeEecCCCcCcCHHHHHHHHHHccCCceEEEeCCCCCCCC-CC
Confidence 0 001224999999999999999999999888766789999999999864 45
Q ss_pred hhhHHHHHHHHhcccC
Q 024042 258 PGLFNSIVKNFLRGSL 273 (273)
Q Consensus 258 ~~~~~~~i~~fl~~~l 273 (273)
.+++.+.+.+|+++.|
T Consensus 199 ~~~l~~~~~~~v~~~l 214 (218)
T d2fuka1 199 LIDLRGALQHGVRRWL 214 (218)
T ss_dssp HHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 5678999999998865
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.95 E-value=4.8e-26 Score=173.48 Aligned_cols=227 Identities=16% Similarity=0.043 Sum_probs=145.0
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccc-----
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQR----- 102 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~----- 102 (273)
+++..||.+|+.+.+.| .+.++.|+||++||++++. ..|...+..|+++ |.|+++|+||+|.|.......
T Consensus 60 ~~~~~dg~~i~~~l~~P---~~~~~~P~vv~~HG~~~~~-~~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~ 135 (318)
T d1l7aa_ 60 TYKSFGNARITGWYAVP---DKEGPHPAIVKYHGYNASY-DGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHAL 135 (318)
T ss_dssp EEEEGGGEEEEEEEEEE---SSCSCEEEEEEECCTTCCS-GGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSS
T ss_pred EEECCCCcEEEEEEEec---CCCCCceEEEEecCCCCCc-cchHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccchhhhh
Confidence 44555899998777653 2345678999999999988 7888888888766 999999999999997653221
Q ss_pred -------------cHHHHHHHHHHHHH---HhC---CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch
Q 024042 103 -------------TELFQAASLGKLLE---KIG---VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN 163 (273)
Q Consensus 103 -------------~~~~~~~~~~~~~~---~~~---~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~ 163 (273)
.......+....++ ... .+++.++|+|+||..++..+...+. +.+++...+.....
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~~---- 210 (318)
T d1l7aa_ 136 GWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNF---- 210 (318)
T ss_dssp SSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCH----
T ss_pred cchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEeccccccH----
Confidence 11122233333332 222 2579999999999999999998765 77777666543321
Q ss_pred HHHhhhhhh----hhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcC
Q 024042 164 EALVKRANL----ERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGK 239 (273)
Q Consensus 164 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~ 239 (273)
......... ...................... ..........++..|+|+++|++|.++|++.+..++++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~ 286 (318)
T d1l7aa_ 211 ERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTL----SYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET 286 (318)
T ss_dssp HHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHH----HTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS
T ss_pred HHHhhcccccccchhhhhhhccccccccccccccc----cccccccccccCCCCEEEEEECCCCCcCHHHHHHHHHHcCC
Confidence 111100000 0000000000111111111000 01133445567778999999999999999999999999966
Q ss_pred CcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 240 KARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 240 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
++++++++++||... ++..+.+.+||+++
T Consensus 287 ~~~l~~~~~~gH~~~----~~~~~~~~~fl~~~ 315 (318)
T d1l7aa_ 287 KKELKVYRYFGHEYI----PAFQTEKLAFFKQI 315 (318)
T ss_dssp SEEEEEETTCCSSCC----HHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCCc----HHHHHHHHHHHHHh
Confidence 789999999999754 44555666666654
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.94 E-value=1.6e-26 Score=171.20 Aligned_cols=229 Identities=17% Similarity=0.150 Sum_probs=151.1
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC--CchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc-
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG--PEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ- 101 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~--~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~- 101 (273)
+..+++..||.+|..+.+.|++ ..++.|+||++||++ ... ..|......|+++ |.|+++|+|+++.+......
T Consensus 13 ~~v~~~s~dG~~i~~~l~~p~~--~~~~~Pviv~~HGG~~~~~~-~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~~ 89 (260)
T d2hu7a2 13 RLVWVESFDGSRVPTYVLESGR--APTPGPTVVLVHGGPFAEDS-DSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLK 89 (260)
T ss_dssp EEEEEECTTSCEEEEEEEEETT--SCSSEEEEEEECSSSSCCCC-SSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHHT
T ss_pred EEEEEECCCCCEEEEEEEeCCC--CCCCceEEEEECCCCccCCC-ccccHHHHHHHhhccccccceeeeccccccccccc
Confidence 4446778899999888776432 234568999999843 333 5566667766665 99999999998776432111
Q ss_pred -------ccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhh--h
Q 024042 102 -------RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRAN--L 172 (273)
Q Consensus 102 -------~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~--~ 172 (273)
....+..+.+..+.+....+++.++|+|+||..++.++..+|+.+++++..++...... ...... .
T Consensus 90 ~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~-----~~~~~~~~~ 164 (260)
T d2hu7a2 90 IIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEE-----MYELSDAAF 164 (260)
T ss_dssp TTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHH-----HHHTCCHHH
T ss_pred cccccchhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhhhh-----hhccccccc
Confidence 11223233333333333457899999999999999999999999999999888665321 110000 0
Q ss_pred hhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCC
Q 024042 173 ERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENT 249 (273)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 249 (273)
..............+. ...+.....++..|+|+++|++|.++|.+.+..+.+.+ +.+++++++|++
T Consensus 165 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~ 233 (260)
T d2hu7a2 165 RNFIEQLTGGSREIMR-----------SRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDA 233 (260)
T ss_dssp HHHHHHHHCSCHHHHH-----------HTCGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTC
T ss_pred cccccccccccccccc-----------ccchhhcccccCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcC
Confidence 0000001111111111 11233345666779999999999999999999998876 467899999999
Q ss_pred CCCcC-cCChhhHHHHHHHHhcccC
Q 024042 250 SHVPQ-IENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 250 gH~~~-~~~~~~~~~~i~~fl~~~l 273 (273)
+|.+. .++..++.+.+.+||++++
T Consensus 234 ~H~~~~~e~~~~~~~~~~~fl~~hl 258 (260)
T d2hu7a2 234 GHAINTMEDAVKILLPAVFFLATQR 258 (260)
T ss_dssp CSSCCBHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCChHhHHHHHHHHHHHHHHHh
Confidence 99754 3566677888889998764
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.94 E-value=1.2e-25 Score=158.07 Aligned_cols=178 Identities=11% Similarity=0.113 Sum_probs=123.9
Q ss_pred CeEEEEcCCCCchhHh-HHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccch
Q 024042 55 PSLVLIHGFGPEAIWQ-WRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGG 132 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~-~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 132 (273)
+.||++||++++.... +..+.+.|.+. |.|+++|+||+|.+ ..+++.+.+....+.. ..+++++||||||
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~-------~~~~~~~~l~~~~~~~-~~~~~lvGhS~Gg 73 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQP-------RLEDWLDTLSLYQHTL-HENTYLVAHSLGC 73 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSC-------CHHHHHHHHHTTGGGC-CTTEEEEEETTHH
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcc-------hHHHHHHHHHHHHhcc-CCCcEEEEechhh
Confidence 4799999999876222 67788888777 99999999999864 3444555555544432 3789999999999
Q ss_pred HHHHHHHHhCCccc--ceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhh
Q 024042 133 FVAYHMARMWPERV--EKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDF 210 (273)
Q Consensus 133 ~~a~~~a~~~~~~v--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (273)
.+++.++.++++.. .+++..++......... ..... .............
T Consensus 74 ~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~----------~~~~~-------------------~~~~~~~~~~~~~ 124 (186)
T d1uxoa_ 74 PAILRFLEHLQLRAALGGIILVSGFAKSLPTLQ----------MLDEF-------------------TQGSFDHQKIIES 124 (186)
T ss_dssp HHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCG----------GGGGG-------------------TCSCCCHHHHHHH
T ss_pred HHHHHHHHhCCccceeeEEeecccccccchhhh----------hhhhh-------------------hcccccccccccC
Confidence 99999999998654 44444443322211100 00000 0011222233345
Q ss_pred hccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcC---ChhhHHHHHHHHhcc
Q 024042 211 VHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE---NPGLFNSIVKNFLRG 271 (273)
Q Consensus 211 ~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~i~~fl~~ 271 (273)
..|+++++|++|+++|.+..+.+++.+ ++++++++++||+...+ .-.++.+.|.+||.+
T Consensus 125 ~~p~lvi~g~~D~~vp~~~~~~l~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 125 AKHRAVIASKDDQIVPFSFSKDLAQQI--DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp EEEEEEEEETTCSSSCHHHHHHHHHHT--TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHc--CCEEEEeCCCCCcCccccCcccHHHHHHHHHHHcC
Confidence 569999999999999999999999987 68999999999986543 234788999999874
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.94 E-value=2.1e-26 Score=172.06 Aligned_cols=214 Identities=12% Similarity=0.049 Sum_probs=145.5
Q ss_pred CCCCCeEEEEcCC--CCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc---cccHHHHHHHHHH-HHHHhCCccEE
Q 024042 51 TLKKPSLVLIHGF--GPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI---QRTELFQAASLGK-LLEKIGVERFS 124 (273)
Q Consensus 51 ~~~~~~vi~~hG~--~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~---~~~~~~~~~~~~~-~~~~~~~~~i~ 124 (273)
.+..|++||+||+ +++. ..|..+++.|...+.|+++|+||+|.+..... ..+.++.++.+.+ +.+..+..+++
T Consensus 57 ~~~~~~l~c~~~~~~~g~~-~~y~~la~~L~~~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~~~~P~v 135 (283)
T d2h7xa1 57 AEGRAVLVGCTGTAANGGP-HEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAPVV 135 (283)
T ss_dssp -CCCCEEEEECCCCTTCST-TTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTTSCEE
T ss_pred CCCCceEEEeCCCCCCCCH-HHHHHHHHhcCCCceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhcCCCceE
Confidence 4567899999985 4555 78999999999889999999999998875543 2478888887665 55667778999
Q ss_pred EEEeccchHHHHHHHHhC----CcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCC
Q 024042 125 VVGTSYGGFVAYHMARMW----PERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLD 200 (273)
Q Consensus 125 l~G~S~Gg~~a~~~a~~~----~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (273)
|+||||||.+|+.+|.+. +.++.+++++++................................+.........
T Consensus 136 L~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~---- 211 (283)
T d2h7xa1 136 LLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARF---- 211 (283)
T ss_dssp EEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHH----
T ss_pred EEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhhhHHHhhcccccccccHHHHHHHHHHHH----
Confidence 999999999999999865 457999999998665543322221111111111112222222222221111000
Q ss_pred CChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc-CChhhHHHHHHHHhcc
Q 024042 201 IVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI-ENPGLFNSIVKNFLRG 271 (273)
Q Consensus 201 ~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 271 (273)
...+....+..|+++++|++|..++.+....|.+.+....+++.++ ++|+.++ ++++.+++.|.+||++
T Consensus 212 -~~~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~~~~~~~v~-G~H~~ml~e~~~~vA~~i~~~L~~ 281 (283)
T d2h7xa1 212 -LAGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVP-GDHFTMMRDHAPAVAEAVLSWLDA 281 (283)
T ss_dssp -HHSCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSSCSEEEEES-SCTTHHHHTTHHHHHHHHHHHHHH
T ss_pred -HhhccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEEc-CCCcccccCCHHHHHHHHHHHHHh
Confidence 0000112355699999999999998887777776664567899998 5898654 6799999999999974
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.93 E-value=1.6e-24 Score=158.21 Aligned_cols=214 Identities=14% Similarity=0.032 Sum_probs=136.3
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcccc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
++.+.+++ .|..+.+... ++++|+||++||++++. ..|..+++.|++. |.|+++|+||+|.|........
T Consensus 3 ~~~~~~~l-~g~~~~~~~p-------~~~~~~vl~lHG~~~~~-~~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~ 73 (238)
T d1ufoa_ 3 VRTERLTL-AGLSVLARIP-------EAPKALLLALHGLQGSK-EHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSK 73 (238)
T ss_dssp EEEEEEEE-TTEEEEEEEE-------SSCCEEEEEECCTTCCH-HHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTT
T ss_pred EEEEEEEE-CCEEEEecCC-------CCCCeEEEEeCCCCCCH-HHHHHHHHHHHHCCCEEEEecCCCCCCCcccccccc
Confidence 45567777 7777666655 35678999999999998 8899999988876 9999999999999876543221
Q ss_pred ----HH-------HHHHHHHHHHH---HhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhh
Q 024042 104 ----EL-------FQAASLGKLLE---KIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169 (273)
Q Consensus 104 ----~~-------~~~~~~~~~~~---~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~ 169 (273)
.. ...+++..++. ..+..++.++|+|+||.+++.++..+|+ +++++.+.+........
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~-~~~~~~~~~~~~~~~~~------- 145 (238)
T d1ufoa_ 74 SPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFR-PRGVLAFIGSGFPMKLP------- 145 (238)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCC-CSCEEEESCCSSCCCCC-------
T ss_pred cchhhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcc-hhheeeeeeeccccccc-------
Confidence 11 11222222222 2244789999999999999999999886 55555444333222110
Q ss_pred hhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-----CCcEEE
Q 024042 170 ANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-----KKARLE 244 (273)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~ 244 (273)
............ ..... ...........|+|+++|++|.++|.+..+++++.+. .+.+++
T Consensus 146 -------~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 210 (238)
T d1ufoa_ 146 -------QGQVVEDPGVLA-LYQAP-------PATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARF 210 (238)
T ss_dssp -------TTCCCCCHHHHH-HHHSC-------GGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEE
T ss_pred -------cccccccccccc-hhhhh-------hhhhhhhhcCCCeEEEEcCCCCccCHHHHHHHHHHHHhcCCCceEEEE
Confidence 000011111111 11000 0111112233499999999999999999999998771 256788
Q ss_pred EeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 245 IIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 245 ~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.++|+||...-+.-+...+.+.+||+
T Consensus 211 ~~~g~gH~~~~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 211 VEEGAGHTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp EETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred EECCCCCccCHHHHHHHHHHHHHHhc
Confidence 89999998653333344444555554
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=1.5e-24 Score=151.00 Aligned_cols=170 Identities=19% Similarity=0.274 Sum_probs=133.3
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccch
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGG 132 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 132 (273)
.++|||+||++++. ..|..+.+.|.+. |.++.++.+|++.+.... ....+...+++.+++++.+.++++++||||||
T Consensus 2 ~~PVv~vHG~~~~~-~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~-~~~~~~l~~~i~~~~~~~~~~~v~lvGHSmGG 79 (179)
T d1ispa_ 2 HNPVVMVHGIGGAS-FNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTN-YNNGPVLSRFVQKVLDETGAKKVDIVAHSMGG 79 (179)
T ss_dssp CCCEEEECCTTCCG-GGGHHHHHHHHHTTCCGGGEEECCCSCTTCCH-HHHHHHHHHHHHHHHHHHCCSCEEEEEETHHH
T ss_pred CCCEEEECCCCCCH-HHHHHHHHHHHHcCCeEEEEecCCcccccccc-chhhhhHHHHHHHHHHhcCCceEEEEeecCcC
Confidence 45789999999998 8999999999887 999999999998876443 34566778888888888999999999999999
Q ss_pred HHHHHHHHhC--CcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhh
Q 024042 133 FVAYHMARMW--PERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDF 210 (273)
Q Consensus 133 ~~a~~~a~~~--~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (273)
.++..++.++ +++|+++|+++++....... . .+.. . ...
T Consensus 80 ~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~~--------------~--l~~~----------------~-------~~~ 120 (179)
T d1ispa_ 80 ANTLYYIKNLDGGNKVANVVTLGGANRLTTGK--------------A--LPGT----------------D-------PNQ 120 (179)
T ss_dssp HHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB--------------C--CCCS----------------C-------TTC
T ss_pred HHHHHHHHHcCCchhhCEEEEECCCCCCchhh--------------h--cCCc----------------c-------ccc
Confidence 9999999876 67899999998764322110 0 0000 0 011
Q ss_pred hccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 211 VHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 211 ~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
..|++.++|..|.++++..+ .+ +..+.+.+++.+|..+..+| ++.+.+.+||+.
T Consensus 121 ~~~~~~i~~~~D~~v~~~~~-----~l-~~~~~~~~~~~~H~~l~~~~-~v~~~i~~~L~~ 174 (179)
T d1ispa_ 121 KILYTSIYSSADMIVMNYLS-----RL-DGARNVQIHGVGHIGLLYSS-QVNSLIKEGLNG 174 (179)
T ss_dssp CCEEEEEEETTCSSSCHHHH-----CC-BTSEEEEESSCCTGGGGGCH-HHHHHHHHHHTT
T ss_pred CceEEEEEecCCcccCchhh-----cC-CCceEEEECCCCchhhccCH-HHHHHHHHHHhc
Confidence 22899999999999998653 34 78888899999999888877 678889999974
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.7e-24 Score=161.72 Aligned_cols=108 Identities=16% Similarity=0.097 Sum_probs=82.7
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHH
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASL 111 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 111 (273)
.++|.++.+...+ ++++++|||+||++++. ..|+.+++.| +++|+++|+||+|.+. +.++.++++
T Consensus 9 ~~~~~~l~~l~~~------~~~~~Pl~l~Hg~~gs~-~~~~~l~~~L--~~~v~~~d~~g~~~~~------~~~~~a~~~ 73 (286)
T d1xkta_ 9 NPEGPTLMRLNSV------QSSERPLFLVHPIEGST-TVFHSLASRL--SIPTYGLQCTRAAPLD------SIHSLAAYY 73 (286)
T ss_dssp CTTSCSEEECCCC------CCCSCCEEEECCTTCCC-GGGHHHHHTC--SSCEEEECCCTTSCCS------CHHHHHHHH
T ss_pred CCCCCEEEEecCC------CCCCCeEEEECCCCccH-HHHHHHHHHc--CCeEEEEeCCCCCCCC------CHHHHHHHH
Confidence 3477777766654 56667899999999999 9999999988 4889999999999875 456666665
Q ss_pred HHHH-HHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecC
Q 024042 112 GKLL-EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS 154 (273)
Q Consensus 112 ~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~ 154 (273)
...+ +..+.++++|+||||||.+|+.+|.++|+++.+++.++.
T Consensus 74 ~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~ 117 (286)
T d1xkta_ 74 IDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNS 117 (286)
T ss_dssp HHHHHHHCCSSCCEEEEETHHHHHHHHHHHHHHHC------CCE
T ss_pred HHHHHHhcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEEE
Confidence 5444 445678999999999999999999999999888766553
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=1.7e-25 Score=162.65 Aligned_cols=203 Identities=13% Similarity=0.110 Sum_probs=125.6
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh-CCccEEEEEec
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI-GVERFSVVGTS 129 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S 129 (273)
.+++++|||+||++++. ..|..+++.|. .|.|+++|++|+|. .++++.+.+.++ +.++++|+|||
T Consensus 14 ~~~~~~l~~lhg~~g~~-~~~~~la~~L~-~~~v~~~~~~g~~~------------~a~~~~~~i~~~~~~~~~~lvGhS 79 (230)
T d1jmkc_ 14 QDQEQIIFAFPPVLGYG-LMYQNLSSRLP-SYKLCAFDFIEEED------------RLDRYADLIQKLQPEGPLTLFGYS 79 (230)
T ss_dssp TTCSEEEEEECCTTCCG-GGGHHHHHHCT-TEEEEEECCCCSTT------------HHHHHHHHHHHHCCSSCEEEEEET
T ss_pred CCCCCeEEEEcCCCCCH-HHHHHHHHHCC-CCEEeccCcCCHHH------------HHHHHHHHHHHhCCCCcEEEEeec
Confidence 35678999999999999 99999999995 69999999998863 244444445554 45789999999
Q ss_pred cchHHHHHHHHhCCcc---cceEEEecCCCCCCCcchHHHhhhhhhhhhhhccC----CCChHH---HHHHhhhhhccCC
Q 024042 130 YGGFVAYHMARMWPER---VEKVVIASSGVNMKRGDNEALVKRANLERIDHLML----PESASQ---LRTLTGLAVSKNL 199 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~~~---v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~ 199 (273)
|||.+|+.+|.++|++ +..++.+.+.......................... ...... +...........
T Consensus 80 ~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 158 (230)
T d1jmkc_ 80 AGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYY- 158 (230)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSHHHHHHHHHHHHHHHHHH-
T ss_pred cChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhhhhhhhhhhhhhccccccccccHHHHHHHHHHHHHHHHhh-
Confidence 9999999999887665 44445554443322211111111110000100000 001111 111110000000
Q ss_pred CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCCh--hhHHHHHHHHhccc
Q 024042 200 DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP--GLFNSIVKNFLRGS 272 (273)
Q Consensus 200 ~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~--~~~~~~i~~fl~~~ 272 (273)
........+..|+++++|++|..++... ..+.+....+.+++.++ +||+.++++| +++++.|.+||++.
T Consensus 159 --~~~~~~~~i~~p~l~i~g~~D~~~~~~~-~~w~~~~~~~~~~~~i~-g~H~~ml~~~~~~~va~~I~~~L~~~ 229 (230)
T d1jmkc_ 159 --VNLISTGQVKADIDLLTSGADFDIPEWL-ASWEEATTGAYRMKRGF-GTHAEMLQGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp --HHCCCCSCBSSEEEEEECSSCCCCCTTE-ECSGGGBSSCEEEEECS-SCGGGTTSHHHHHHHHHHHHHHHTCB
T ss_pred --hcccccccccCcceeeeecCCcccchhH-HHHHHhccCCcEEEEEc-CCChhhcCCccHHHHHHHHHHHHhhc
Confidence 0001122445599999999999988543 33444444678888998 6999888866 88999999999864
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.91 E-value=3.5e-23 Score=152.88 Aligned_cols=230 Identities=12% Similarity=0.070 Sum_probs=141.3
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCc----hhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPE----AIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI- 100 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~----~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~- 100 (273)
...+...||.+++|+.+-|++-.+.++.|+||++||+++. ....+......++++ |.|+.+|+||.+.......
T Consensus 5 ~~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~~~ 84 (258)
T d2bgra2 5 KLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMH 84 (258)
T ss_dssp EEEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHG
T ss_pred eEEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcchHHHH
Confidence 3344455999999999876543334455899999994111 112222233345554 9999999999775432110
Q ss_pred ----cccHHHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhh
Q 024042 101 ----QRTELFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA 170 (273)
Q Consensus 101 ----~~~~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~ 170 (273)
... ....+++.++++.+ +.+++.++|+|+||.+++.++..+|+.....+..++................
T Consensus 85 ~~~~~~~-~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (258)
T d2bgra2 85 AINRRLG-TFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYM 163 (258)
T ss_dssp GGTTCTT-SHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHHHHHHH
T ss_pred hhhhhhh-hHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeecccccccccccccchhc
Confidence 011 11233334444443 2257999999999999999999999888777776655443322111111100
Q ss_pred hhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhh-ccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEe
Q 024042 171 NLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV-HDVLIVWGDQDQIFPLKMATELKELL---GKKARLEII 246 (273)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~ 246 (273)
. .............. .+.....++. .|+++++|++|..+|.+.++.+.+++ +.+++++++
T Consensus 164 ~-----~~~~~~~~~~~~~~-----------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~ 227 (258)
T d2bgra2 164 G-----LPTPEDNLDHYRNS-----------TVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWY 227 (258)
T ss_dssp C-----CCSTTTTHHHHHHS-----------CSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEE
T ss_pred c-----cccchhhHHHhhcc-----------cccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEE
Confidence 0 00011111111110 1111122332 49999999999999999988888776 467899999
Q ss_pred CCCCCCcC-cCChhhHHHHHHHHhcccC
Q 024042 247 ENTSHVPQ-IENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 247 ~~~gH~~~-~~~~~~~~~~i~~fl~~~l 273 (273)
|+++|.+. .+....+.+.+.+||+++|
T Consensus 228 ~g~~H~~~~~~~~~~~~~~i~~fl~~~l 255 (258)
T d2bgra2 228 TDEDHGIASSTAHQHIYTHMSHFIKQCF 255 (258)
T ss_dssp TTCCTTCCSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHHh
Confidence 99999753 3456788899999999875
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.91 E-value=2.7e-23 Score=158.48 Aligned_cols=228 Identities=13% Similarity=0.022 Sum_probs=139.1
Q ss_pred EecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcc--------
Q 024042 30 IDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ-------- 101 (273)
Q Consensus 30 ~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~-------- 101 (273)
++..||.+|+.+.+.|+. .+++.|+||++||++.+. ..+.......+++|.|+++|+||+|.|......
T Consensus 60 ~~s~dG~~l~~~l~~P~~--~~~~~P~Vv~~hG~~~~~-~~~~~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~ 136 (322)
T d1vlqa_ 60 FSGYRGQRIKGWLLVPKL--EEEKLPCVVQYIGYNGGR-GFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPV 136 (322)
T ss_dssp EECGGGCEEEEEEEEECC--SCSSEEEEEECCCTTCCC-CCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSB
T ss_pred EECCCCcEEEEEEEeccC--CCCCccEEEEecCCCCCc-CcHHHHHHHHhCCCEEEEeeccccCCCCCCccccccccccc
Confidence 445689999988875432 244568999999988766 555444444555699999999999998654211
Q ss_pred -----------------ccHHHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 102 -----------------RTELFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 102 -----------------~~~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
........++...++.+ +.+++.++|+|+||.+++.++...+ ++++++...+....
T Consensus 137 ~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~ 215 (322)
T d1vlqa_ 137 DPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCH 215 (322)
T ss_dssp CCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCC
T ss_pred cccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEEeCCcccc
Confidence 01112233444444433 2367999999999999999888765 58888877665432
Q ss_pred CCcchHHHhhhhhhhhhhh--ccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHH
Q 024042 159 KRGDNEALVKRANLERIDH--LMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKEL 236 (273)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~ 236 (273)
..... ............. ............... ...+.....++..|+|+++|++|.++|++.+..+.++
T Consensus 216 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~ 287 (322)
T d1vlqa_ 216 FRRAV-QLVDTHPYAEITNFLKTHRDKEEIVFRTLS-------YFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNY 287 (322)
T ss_dssp HHHHH-HHCCCTTHHHHHHHHHHCTTCHHHHHHHHH-------TTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred HHHHH-hhccccchhhHHhhhhcCcchhhhHHHHhh-------hhhHHHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHH
Confidence 21100 0000000000000 000111111111110 1134445667778999999999999999999999999
Q ss_pred hcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 237 LGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 237 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
++.+++++++|+++|....+ .-.+...+||++.
T Consensus 288 ~~~~~~l~~~p~~~H~~~~~---~~~~~~~~~l~~~ 320 (322)
T d1vlqa_ 288 YAGPKEIRIYPYNNHEGGGS---FQAVEQVKFLKKL 320 (322)
T ss_dssp CCSSEEEEEETTCCTTTTHH---HHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCCccc---cCHHHHHHHHHHH
Confidence 86678999999999964221 1223344677654
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=2.4e-23 Score=153.70 Aligned_cols=229 Identities=16% Similarity=0.116 Sum_probs=137.6
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHhH--HHHHHhhcCC-CeEEeecCCCCCCCCCC-
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQW--RKQVQFFAPH-FNVYVPDLIFFGHSTTR- 98 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~~--~~~~~~l~~~-~~v~~~d~~g~g~s~~~- 98 (273)
++.++++. ||.+|+.+.+.|++-...++.|+||++||.++.. ...| ......|++. |.|+++|+||.+.+...
T Consensus 3 v~~~~i~~-dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~ 81 (258)
T d1xfda2 3 VEYRDIEI-DDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKL 81 (258)
T ss_dssp CCBCCEEE-TTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHH
T ss_pred eEEEEEee-CCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhH
Confidence 45566777 9999999888755433344568999999953211 1122 2233456665 99999999985432110
Q ss_pred ----CccccHHHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCc----ccceEEEecCCCCCCCcchH
Q 024042 99 ----SIQRTELFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPE----RVEKVVIASSGVNMKRGDNE 164 (273)
Q Consensus 99 ----~~~~~~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~~~~~~~ 164 (273)
..... ....+++.+.++.+ +.++|.++|+|+||.+|+.++...++ .+...+...+..........
T Consensus 82 ~~~~~~~~g-~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (258)
T d1xfda2 82 LHEVRRRLG-LLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASA 160 (258)
T ss_dssp HHTTTTCTT-THHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHH
T ss_pred hhhhhccch-hHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeeccccc
Confidence 00111 11233444444443 33789999999999999988876654 35555555554433222111
Q ss_pred HHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhh-hhccEEEEecCCCCCCChHHHHHHHHHh---cCC
Q 024042 165 ALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFND-FVHDVLIVWGDQDQIFPLKMATELKELL---GKK 240 (273)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~ 240 (273)
........... ... ......+...... ...|+|+++|+.|..+|++.+.++.+.+ +.+
T Consensus 161 ~~~~~~~~~~~-------~~~-----------~~~~~s~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~ 222 (258)
T d1xfda2 161 FSERYLGLHGL-------DNR-----------AYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKAN 222 (258)
T ss_dssp HHHHHHCCCSS-------CCS-----------STTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCC
T ss_pred ccccccccccc-------chH-----------HhhccchhhhhhhhhcccccccccCCCCCcCHHHHHHHHHHHHHCCCC
Confidence 11111110000 000 0000111122222 2459999999999999999988887766 467
Q ss_pred cEEEEeCCCCCCcCc-CChhhHHHHHHHHhcccC
Q 024042 241 ARLEIIENTSHVPQI-ENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 241 ~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~l 273 (273)
.+++++|+++|.+.. +....+.+.+.+||+++|
T Consensus 223 ~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~~ 256 (258)
T d1xfda2 223 YSLQIYPDESHYFTSSSLKQHLYRSIINFFVECF 256 (258)
T ss_dssp CEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTT
T ss_pred EEEEEECCCCCCCCCCcCHHHHHHHHHHHHHHhh
Confidence 899999999997543 345567789999999875
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.6e-22 Score=146.22 Aligned_cols=180 Identities=16% Similarity=0.151 Sum_probs=122.1
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCC--------------CCCC---C-CccccHHHHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFG--------------HSTT---R-SIQRTELFQAASL 111 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g--------------~s~~---~-~~~~~~~~~~~~~ 111 (273)
.+..++||++||+|++. ..|..+...+... +.+++++-|.+. .... . ......++..+.+
T Consensus 18 ~~~~~~VI~lHG~G~~~-~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l 96 (229)
T d1fj2a_ 18 RKATAAVIFLHGLGDTG-HGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENI 96 (229)
T ss_dssp SCCSEEEEEECCSSSCH-HHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCH-HHHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHH
Confidence 44557999999999998 8888888877665 888887754211 0000 0 0111234444455
Q ss_pred HHHHHHh-----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHH
Q 024042 112 GKLLEKI-----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQ 186 (273)
Q Consensus 112 ~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (273)
..+++.. +.++++++|+|+||.+|+.++.++|+++++++.+++........ ......
T Consensus 97 ~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~~-------------~~~~~~----- 158 (229)
T d1fj2a_ 97 KALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF-------------PQGPIG----- 158 (229)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS-------------CSSCCC-----
T ss_pred HHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccccccc-------------cccccc-----
Confidence 5555432 44789999999999999999999999999999998754321100 000000
Q ss_pred HHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh-----cCCcEEEEeCCCCCCcCcCChhhH
Q 024042 187 LRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL-----GKKARLEIIENTSHVPQIENPGLF 261 (273)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~~~gH~~~~~~~~~~ 261 (273)
......|++++||++|.++|.+.++...+.+ +.+++++.+++.||... ++ .
T Consensus 159 --------------------~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~---~~-~ 214 (229)
T d1fj2a_ 159 --------------------GANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSC---QQ-E 214 (229)
T ss_dssp --------------------STTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCC---HH-H
T ss_pred --------------------cccccCceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCccC---HH-H
Confidence 0001239999999999999999887766655 24678899999999753 33 3
Q ss_pred HHHHHHHhcccC
Q 024042 262 NSIVKNFLRGSL 273 (273)
Q Consensus 262 ~~~i~~fl~~~l 273 (273)
.+.+.+||+++|
T Consensus 215 ~~~~~~wL~~~L 226 (229)
T d1fj2a_ 215 MMDVKQFIDKLL 226 (229)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHhHC
Confidence 566889998865
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.89 E-value=4.7e-22 Score=151.60 Aligned_cols=239 Identities=14% Similarity=0.183 Sum_probs=158.4
Q ss_pred EEecCCc-----ceEEeecCCccCCCCCCCCCeEEEEcCCCCchh-Hh-HHHHH---HhhcCC-CeEEeecCCCCCCCCC
Q 024042 29 TIDIDDE-----TTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI-WQ-WRKQV---QFFAPH-FNVYVPDLIFFGHSTT 97 (273)
Q Consensus 29 ~~~~~~g-----~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~-~~-~~~~~---~~l~~~-~~v~~~d~~g~g~s~~ 97 (273)
.++++.| .+|.|..+|.. ...+.++||++|++.++.. .. |..++ ..|... |-||++|..|.|.++.
T Consensus 17 ~F~le~G~~l~~~~laY~t~G~l---n~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst 93 (376)
T d2vata1 17 LFTLESGVILRDVPVAYKSWGRM---NVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSA 93 (376)
T ss_dssp EEECTTSCEEEEEEEEEEEESCC---CTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSS
T ss_pred cEEeCCCCCcCCceEEEEeeccc---CCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCC
Confidence 4556555 44679999822 2345678999999987761 12 33333 344445 9999999998765431
Q ss_pred CC-----------------ccccHHHHHHHHHHHHHHhCCccE-EEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC
Q 024042 98 RS-----------------IQRTELFQAASLGKLLEKIGVERF-SVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK 159 (273)
Q Consensus 98 ~~-----------------~~~~~~~~~~~~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~ 159 (273)
.+ +..++.++++.-..++++++++++ .++|.||||+.|+++|..+|++++++|.+++.....
T Consensus 94 ~p~s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s 173 (376)
T d2vata1 94 GPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQS 173 (376)
T ss_dssp STTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCC
T ss_pred CCCCCCcccccCCcccccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccc
Confidence 11 124788999998999999999997 578999999999999999999999999998876443
Q ss_pred Ccch-------HHHh--------------------hhhh---------hhhhhhccCCC---------------------
Q 024042 160 RGDN-------EALV--------------------KRAN---------LERIDHLMLPE--------------------- 182 (273)
Q Consensus 160 ~~~~-------~~~~--------------------~~~~---------~~~~~~~~~~~--------------------- 182 (273)
.... ..+. .... ...+...+...
T Consensus 174 ~~~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~ 253 (376)
T d2vata1 174 GWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGT 253 (376)
T ss_dssp HHHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC-----------------
T ss_pred hHHHHHHHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhccccc
Confidence 2110 0000 0000 00011000000
Q ss_pred ----------ChHHHHHHh--------------------hhhhccC----CCCChhhHHhhhhccEEEEecCCCCCCChH
Q 024042 183 ----------SASQLRTLT--------------------GLAVSKN----LDIVPDFFFNDFVHDVLIVWGDQDQIFPLK 228 (273)
Q Consensus 183 ----------~~~~~~~~~--------------------~~~~~~~----~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~ 228 (273)
....+..++ ....... ........+..+..|+|+|.++.|.+.|++
T Consensus 254 ~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~ 333 (376)
T d2vata1 254 DSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFD 333 (376)
T ss_dssp ----------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHH
T ss_pred ccccccccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHH
Confidence 000011100 0000000 011234456778889999999999999999
Q ss_pred HHHHHHHHhcCCcEEEEeC-CCCCCcCcCChhhHHHHHHHHhcc
Q 024042 229 MATELKELLGKKARLEIIE-NTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
..+.+++.+ +++++.+++ ..||..++.+++.+.+.|.+||++
T Consensus 334 ~~~e~a~~l-~~a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 334 EHVEMGRSI-PNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp HHHHHHHHS-TTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHHHHhc-CCCeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 999999999 899999997 579987676799999999999975
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.89 E-value=2.7e-21 Score=138.50 Aligned_cols=196 Identities=18% Similarity=0.168 Sum_probs=136.8
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCC---CCch-hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccc
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGF---GPEA-IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQR 102 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~---~~~~-~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~ 102 (273)
..|.-++| +|+.+... +.....+++|++||. |++. ......+++.|.+. +.|+.+|+||.|.|.......
T Consensus 3 v~i~g~~G-~Le~~~~~----~~~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~~ 77 (218)
T d2i3da1 3 VIFNGPAG-RLEGRYQP----SKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHG 77 (218)
T ss_dssp EEEEETTE-EEEEEEEC----CSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSS
T ss_pred EEEeCCCc-cEEEEEeC----CCCCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCccccccc
Confidence 34666677 78776654 334557899999983 4443 13345567777666 999999999999998765432
Q ss_pred -cHHHHHHHHHHHHHHhC--CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc
Q 024042 103 -TELFQAASLGKLLEKIG--VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM 179 (273)
Q Consensus 103 -~~~~~~~~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (273)
...+....+..++.... ..+++++|+|+||.+++.++.+.+. +.+++++.+.......
T Consensus 78 ~~e~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~~-~~~~~~~~~~~~~~~~------------------ 138 (218)
T d2i3da1 78 AGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYDF------------------ 138 (218)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSCC------------------
T ss_pred hhHHHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhcc-ccceeeccccccccch------------------
Confidence 22122222233333232 3679999999999999999988754 7777777765443211
Q ss_pred CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc----CCcEEEEeCCCCCCcCc
Q 024042 180 LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG----KKARLEIIENTSHVPQI 255 (273)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~ 255 (273)
........|.++++|+.|.+++.+....+.+.+. .+.++++++|++|++.
T Consensus 139 -------------------------~~~~~~~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~- 192 (218)
T d2i3da1 139 -------------------------SFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN- 192 (218)
T ss_dssp -------------------------TTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-
T ss_pred -------------------------hhccccCCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCc-
Confidence 0011122389999999999999999988887762 3458999999999875
Q ss_pred CChhhHHHHHHHHhcccC
Q 024042 256 ENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 256 ~~~~~~~~~i~~fl~~~l 273 (273)
.+.+++.+.+.+||+++|
T Consensus 193 g~~~~l~~~v~~~l~~~l 210 (218)
T d2i3da1 193 GKVDELMGECEDYLDRRL 210 (218)
T ss_dssp TCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhc
Confidence 567899999999998764
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.89 E-value=5.1e-22 Score=141.14 Aligned_cols=175 Identities=18% Similarity=0.168 Sum_probs=124.2
Q ss_pred CCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCC------Ccccc---HHHHHHHHHH----HHH
Q 024042 50 KTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTR------SIQRT---ELFQAASLGK----LLE 116 (273)
Q Consensus 50 ~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~------~~~~~---~~~~~~~~~~----~~~ 116 (273)
.++++|+||++||++++. ..|..+.+.+.+++.|++++.+..+..... ....+ .....+.+.. +.+
T Consensus 10 ~~~~~P~vi~lHG~g~~~-~~~~~~~~~l~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (202)
T d2h1ia1 10 KDTSKPVLLLLHGTGGNE-LDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAK 88 (202)
T ss_dssp SCTTSCEEEEECCTTCCT-TTTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCH-HHHHHHHHHhccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 356789999999999988 889999999998899999876533222110 01112 2222333333 333
Q ss_pred HhC--CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhh
Q 024042 117 KIG--VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLA 194 (273)
Q Consensus 117 ~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (273)
..+ .++++++|+|+||.+++.++..+|+++.+++.+++........
T Consensus 89 ~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 136 (202)
T d2h1ia1 89 EYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGMQ-------------------------------- 136 (202)
T ss_dssp HTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSCC--------------------------------
T ss_pred hccccccceeeecccccchHHHHHHHhccccccceeeecCCCCccccc--------------------------------
Confidence 434 4699999999999999999999999999999988754432110
Q ss_pred hccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 195 VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.......|+++++|++|.++|++.++++.+.+ +.+.+++.+| +||.. +.+..+.+.+||++
T Consensus 137 -----------~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~-ggH~~----~~~~~~~~~~wl~k 200 (202)
T d2h1ia1 137 -----------LANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWEN-RGHQL----TMGEVEKAKEWYDK 200 (202)
T ss_dssp -----------CCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEES-STTSC----CHHHHHHHHHHHHH
T ss_pred -----------ccccccchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEEC-CCCcC----CHHHHHHHHHHHHH
Confidence 00011127899999999999999999998887 2367889998 58975 33456778999987
Q ss_pred cC
Q 024042 272 SL 273 (273)
Q Consensus 272 ~l 273 (273)
.+
T Consensus 201 ~f 202 (202)
T d2h1ia1 201 AF 202 (202)
T ss_dssp HC
T ss_pred hC
Confidence 64
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.88 E-value=3.4e-22 Score=142.59 Aligned_cols=181 Identities=15% Similarity=0.123 Sum_probs=122.0
Q ss_pred ceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCC--C---CCCC-CCccc---cH--
Q 024042 36 TTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFF--G---HSTT-RSIQR---TE-- 104 (273)
Q Consensus 36 ~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~--g---~s~~-~~~~~---~~-- 104 (273)
..+.|+..+ .+.++.|+||++||++++. ..|..+.+.|.+++.+++++.+.. + .... ..... ..
T Consensus 9 ~~~~~~~~~----~~~~~~p~vv~lHG~g~~~-~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (209)
T d3b5ea1 9 LAFPYRLLG----AGKESRECLFLLHGSGVDE-TTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILA 83 (209)
T ss_dssp SSSCEEEES----TTSSCCCEEEEECCTTBCT-TTTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHH
T ss_pred CcceeEecC----CCCCCCCEEEEEcCCCCCH-HHHHHHHHHhccCcEEEeeccCcCcccCccccccCCccccchhhHHH
Confidence 345555554 4467789999999999998 889999999998899998875421 1 0000 01111 12
Q ss_pred --HHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccC
Q 024042 105 --LFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML 180 (273)
Q Consensus 105 --~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (273)
....+.|..+.++. +.++++++|||+||.+++.++.++|+++++++++++........
T Consensus 84 ~~~~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~~~~------------------ 145 (209)
T d3b5ea1 84 ETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHVP------------------ 145 (209)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSCC------------------
T ss_pred HHHHHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcccccccc------------------
Confidence 22223333444444 34789999999999999999999999999999998854322110
Q ss_pred CCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCC
Q 024042 181 PESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIEN 257 (273)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~ 257 (273)
.......|+++++|++|++++ +..+++.+.+ +.+++++++++ ||...
T Consensus 146 -------------------------~~~~~~~p~~~~~G~~D~~~~-~~~~~~~~~l~~~G~~v~~~~~~g-gH~i~--- 195 (209)
T d3b5ea1 146 -------------------------ATDLAGIRTLIIAGAADETYG-PFVPALVTLLSRHGAEVDARIIPS-GHDIG--- 195 (209)
T ss_dssp -------------------------CCCCTTCEEEEEEETTCTTTG-GGHHHHHHHHHHTTCEEEEEEESC-CSCCC---
T ss_pred -------------------------ccccccchheeeeccCCCccC-HHHHHHHHHHHHCCCCeEEEEECC-CCCCC---
Confidence 000111289999999999987 4445555544 45678999985 79763
Q ss_pred hhhHHHHHHHHhc
Q 024042 258 PGLFNSIVKNFLR 270 (273)
Q Consensus 258 ~~~~~~~i~~fl~ 270 (273)
+++ .+.+.+||.
T Consensus 196 ~~~-~~~~~~wl~ 207 (209)
T d3b5ea1 196 DPD-AAIVRQWLA 207 (209)
T ss_dssp HHH-HHHHHHHHH
T ss_pred HHH-HHHHHHHhC
Confidence 334 466789985
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.88 E-value=1.8e-21 Score=143.34 Aligned_cols=170 Identities=16% Similarity=0.139 Sum_probs=122.9
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH------hCCccE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK------IGVERF 123 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~------~~~~~i 123 (273)
+++.|.||++||++++. ..+..+++.|++. |.|+++|++|++.... ....+..+.+..+.+. ++.++|
T Consensus 49 ~g~~P~Vv~~HG~~g~~-~~~~~~a~~lA~~Gy~V~~~d~~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~vD~~rI 123 (260)
T d1jfra_ 49 DGTFGAVVISPGFTAYQ-SSIAWLGPRLASQGFVVFTIDTNTTLDQPD----SRGRQLLSALDYLTQRSSVRTRVDATRL 123 (260)
T ss_dssp TCCEEEEEEECCTTCCG-GGTTTHHHHHHTTTCEEEEECCSSTTCCHH----HHHHHHHHHHHHHHHTSTTGGGEEEEEE
T ss_pred CCCccEEEEECCCCCCH-HHHHHHHHHHHhCCCEEEEEeeCCCcCCch----hhHHHHHHHHHHHHhhhhhhccccccce
Confidence 34568999999999998 8888899999888 9999999998765421 1111222222222221 234789
Q ss_pred EEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCCh
Q 024042 124 SVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVP 203 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (273)
.++|||+||.+++.++...+ ++.++|.+++......
T Consensus 124 ~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~~~------------------------------------------- 159 (260)
T d1jfra_ 124 GVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTDKT------------------------------------------- 159 (260)
T ss_dssp EEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSCCC-------------------------------------------
T ss_pred EEEeccccchHHHHHHhhhc-cchhheeeeccccccc-------------------------------------------
Confidence 99999999999999999876 5888888877543211
Q ss_pred hhHHhhhhccEEEEecCCCCCCChHH-HHHHHHHh--cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 204 DFFFNDFVHDVLIVWGDQDQIFPLKM-ATELKELL--GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 204 ~~~~~~~~~p~l~i~g~~D~~~~~~~-~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
..++..|+|+++|++|.++|.+. .+.+.+.. +...++++++|++|.........+.+.+..||+.+
T Consensus 160 ---~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~~ 228 (260)
T d1jfra_ 160 ---WPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRF 228 (260)
T ss_dssp ---CTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHH
T ss_pred ---ccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECCCccCCCCCChHHHHHHHHHHHHHH
Confidence 11233499999999999999865 55555555 23567899999999876666667888888888754
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.88 E-value=2.6e-21 Score=137.49 Aligned_cols=173 Identities=19% Similarity=0.200 Sum_probs=126.1
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC------ccc---cHHHHHHHHHHHHH----H
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS------IQR---TELFQAASLGKLLE----K 117 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~------~~~---~~~~~~~~~~~~~~----~ 117 (273)
.+..|+||++||++++. ..|..+.+.+.+++.++.++.+..+...... ... +.....+.+..+++ .
T Consensus 14 ~~~~P~vi~lHG~G~~~-~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 92 (203)
T d2r8ba1 14 VAGAPLFVLLHGTGGDE-NQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREH 92 (203)
T ss_dssp CTTSCEEEEECCTTCCH-HHHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCH-HHHHHHHHHhccCCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHHHHhhhc
Confidence 56789999999999998 8899999999888889988766433322110 011 22333444444443 4
Q ss_pred hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhcc
Q 024042 118 IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSK 197 (273)
Q Consensus 118 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (273)
.+.++++++|+|+||.+++.++..+|+.+.++++.++........ .
T Consensus 93 ~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~-----------------~----------------- 138 (203)
T d2r8ba1 93 YQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPKI-----------------S----------------- 138 (203)
T ss_dssp HTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCCC-----------------C-----------------
T ss_pred CCCceEEEEEecCHHHHHHHHHHhhhhcccceeeecccccccccc-----------------c-----------------
Confidence 577899999999999999999999999999999999865432110 0
Q ss_pred CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 198 NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 198 ~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
. .....|++++||++|.++|.+.++++.+.+ +.+++++++++ ||.+. ++ ..+.+.+||.++
T Consensus 139 --~-------~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~g-gH~~~---~~-~~~~~~~wl~~~ 202 (203)
T d2r8ba1 139 --P-------AKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPG-GHEIR---SG-EIDAVRGFLAAY 202 (203)
T ss_dssp --C-------CCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESS-CSSCC---HH-HHHHHHHHHGGG
T ss_pred --c-------ccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEECC-CCcCC---HH-HHHHHHHHHHhc
Confidence 0 001128999999999999999999888877 35678999985 89853 33 456788999875
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.88 E-value=4.3e-22 Score=146.15 Aligned_cols=209 Identities=12% Similarity=0.051 Sum_probs=134.4
Q ss_pred CCCCCeEEEEcCC--CCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH-hCCccEEEEE
Q 024042 51 TLKKPSLVLIHGF--GPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK-IGVERFSVVG 127 (273)
Q Consensus 51 ~~~~~~vi~~hG~--~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G 127 (273)
.+..|+|+|+||. +++. ..|..++..|...+.|+++|.||+|.+... ..+++++++.+.+.+.. .+..+++|+|
T Consensus 39 g~~~~~l~c~~~~~~gg~~-~~y~~La~~L~~~~~V~al~~pG~~~~e~~--~~s~~~~a~~~~~~i~~~~~~~P~~L~G 115 (255)
T d1mo2a_ 39 GPGEVTVICCAGTAAISGP-HEFTRLAGALRGIAPVRAVPQPGYEEGEPL--PSSMAAVAAVQADAVIRTQGDKPFVVAG 115 (255)
T ss_dssp CSCSSEEEEECCCSSSCSG-GGGHHHHHHHTTTCCEEEECCTTSSTTCCE--ESSHHHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred CCCCCeEEEECCCCCCCCH-HHHHHHHHhcCCCceEEEEeCCCcCCCCCC--CCCHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 3467899999984 4566 889999999988899999999999987533 45888888888766654 4568899999
Q ss_pred eccchHHHHHHHHhC---CcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChh
Q 024042 128 TSYGGFVAYHMARMW---PERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPD 204 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~---~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (273)
||+||.+|+.+|.+. ..++.+++++++................................+........ ....
T Consensus 116 hS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~-----~~~~ 190 (255)
T d1mo2a_ 116 HSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTALGAYDR-----LTGQ 190 (255)
T ss_dssp CSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHHHHHHHHHHHTTCC----CCCCHHHHHHHHHHHH-----HHHH
T ss_pred eCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccchhhHHHHHHHHhhccccccCCHHHHHHHHHHHH-----HHhc
Confidence 999999999999865 44599999999865543221111111111111111111112222211111000 0000
Q ss_pred hHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc-CChhhHHHHHHHHhc
Q 024042 205 FFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI-ENPGLFNSIVKNFLR 270 (273)
Q Consensus 205 ~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~ 270 (273)
+....+..|++++.+++|...... ..+........+++.++ ++|+.++ ++++.+++.|.+||.
T Consensus 191 ~~~~~~~~p~l~v~a~~~~~~~~~--~~w~~~~~~~~~~~~v~-G~H~~ml~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 191 WRPRETGLPTLLVSAGEPMGPWPD--DSWKPTWPFEHDTVAVP-GDHFTMVQEHADAIARHIDAWLG 254 (255)
T ss_dssp CCCCCCCCCEEEEECCSSSSCCTT--CCCCCCCCSSCEEEECC-SCCSSCSSCCHHHHHHHHHHHHT
T ss_pred CCCccccceEEEeecCCCCCcchh--hHHHHhCCCCcEEEEEC-CCCcccccccHHHHHHHHHHHhC
Confidence 111234559999999887554332 23333333568899998 6998544 688999999999985
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.87 E-value=8.6e-21 Score=137.50 Aligned_cols=195 Identities=17% Similarity=0.102 Sum_probs=132.7
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc----
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ---- 101 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~---- 101 (273)
..+++..||.+++.+... +.+++.|.||++|++.+.. ...+.+++.|++. |.|+++|+.+.+........
T Consensus 5 ~v~~~~~dg~~~~a~~~~----P~~~~~P~vl~~h~~~G~~-~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~ 79 (233)
T d1dina_ 5 GISIQSYDGHTFGALVGS----PAKAPAPVIVIAQEIFGVN-AFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDER 79 (233)
T ss_dssp TCCEECTTSCEECEEEEC----CSSSSEEEEEEECCTTBSC-HHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHH
T ss_pred EEEEEcCCCCEEEEEEEC----CCCCCceEEEEeCCCCCCC-HHHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHH
Confidence 345777799999888775 3356789999999776655 5567778888776 99999998766554332211
Q ss_pred -----------ccHHHHHHHHHHHHHHh---C--CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHH
Q 024042 102 -----------RTELFQAASLGKLLEKI---G--VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA 165 (273)
Q Consensus 102 -----------~~~~~~~~~~~~~~~~~---~--~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~ 165 (273)
.+.+....++...++.+ . .++|.++|+|+||.+++.++... .+.+.+...+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~--~~~~~~~~~~~~~~------- 150 (233)
T d1dina_ 80 QREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG--YVDRAVGYYGVGLE------- 150 (233)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT--CSSEEEEESCSCGG-------
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc--ccceeccccccccc-------
Confidence 12333445566555554 1 25899999999999999988763 35555544321110
Q ss_pred HhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh--cCCcEE
Q 024042 166 LVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL--GKKARL 243 (273)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~ 243 (273)
.+.....++..|+|+++|++|+.+|.+..+.+.+.+ +++.++
T Consensus 151 ------------------------------------~~~~~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~ 194 (233)
T d1dina_ 151 ------------------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQV 194 (233)
T ss_dssp ------------------------------------GGGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEE
T ss_pred ------------------------------------cchhhhhccCCcceeeecccccCCCHHHHHHHHHHHhcCCCEEE
Confidence 000112234559999999999999999888887766 356789
Q ss_pred EEeCCCCCCcCcCCh--------hhHHHHHHHHhcc
Q 024042 244 EIIENTSHVPQIENP--------GLFNSIVKNFLRG 271 (273)
Q Consensus 244 ~~~~~~gH~~~~~~~--------~~~~~~i~~fl~~ 271 (273)
+++||++|.++.... ++..+.+.+||.+
T Consensus 195 ~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~ 230 (233)
T d1dina_ 195 HWYEEAGHSFARTSSSGYVASAAALANERTLDFLAP 230 (233)
T ss_dssp EEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGG
T ss_pred EEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHc
Confidence 999999997654322 2335667788864
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.87 E-value=5.2e-21 Score=144.77 Aligned_cols=233 Identities=15% Similarity=0.136 Sum_probs=151.4
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHh---------HHHHH---HhhcCC-CeEEeecCCCCCCCCCCC--
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQ---------WRKQV---QFFAPH-FNVYVPDLIFFGHSTTRS-- 99 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~---------~~~~~---~~l~~~-~~v~~~d~~g~g~s~~~~-- 99 (273)
..+|.|..+|.. ...+.++||++|++.++. .. |..++ ..|... |.||++|..|.+.++.++
T Consensus 23 ~~~laY~t~G~l---n~~~~NaVlv~h~~tg~~-~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s 98 (357)
T d2b61a1 23 YINVAYQTYGTL---NDEKNNAVLICHALTGDA-EPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSS 98 (357)
T ss_dssp SEEEEEEEESCC---CTTCCCEEEEECCTTCCS-CSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTS
T ss_pred CceEEEEeeccc---CCCCCCEEEEcCCCCccc-cccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCC
Confidence 456789999832 233458999999998876 32 33343 345445 999999999976533211
Q ss_pred -------------ccccHHHHHHHHHHHHHHhCCccE-EEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch--
Q 024042 100 -------------IQRTELFQAASLGKLLEKIGVERF-SVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN-- 163 (273)
Q Consensus 100 -------------~~~~~~~~~~~~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~-- 163 (273)
+..++.+.++.-..++++++++++ .++|.||||+.|+++|..+|++++++|.+++.........
T Consensus 99 ~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~ 178 (357)
T d2b61a1 99 INPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGF 178 (357)
T ss_dssp BCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHH
T ss_pred CCCCCCCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHH
Confidence 134888999999999999999998 5679999999999999999999999999988754332110
Q ss_pred -----HHHhhh--------------------hh---------hhhhhhccCC----------------------------
Q 024042 164 -----EALVKR--------------------AN---------LERIDHLMLP---------------------------- 181 (273)
Q Consensus 164 -----~~~~~~--------------------~~---------~~~~~~~~~~---------------------------- 181 (273)
..+... .. ...+...+..
T Consensus 179 ~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~ 258 (357)
T d2b61a1 179 NHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLE 258 (357)
T ss_dssp HHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHh
Confidence 000000 00 0000000000
Q ss_pred -CChHHHHHHhhhhhccC---CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCC-CCCCc
Q 024042 182 -ESASQLRTLTGLAVSKN---LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIEN-TSHVP 253 (273)
Q Consensus 182 -~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~-~gH~~ 253 (273)
.....+..+........ ....-...+.++..|+|++..+.|.+.|++..+.+++.+ +.++++++++. .||..
T Consensus 259 rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHda 338 (357)
T d2b61a1 259 RFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDA 338 (357)
T ss_dssp TCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGH
T ss_pred hCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCccc
Confidence 00000000000000000 011222335566669999999999999999998888877 24578888876 49987
Q ss_pred CcCChhhHHHHHHHHhcc
Q 024042 254 QIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 254 ~~~~~~~~~~~i~~fl~~ 271 (273)
++.+.+++.+.|.+||+.
T Consensus 339 fL~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 339 FLVDYDQFEKRIRDGLAG 356 (357)
T ss_dssp HHHCHHHHHHHHHHHHHT
T ss_pred cCcCHHHHHHHHHHHHcc
Confidence 777789999999999975
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.87 E-value=2.2e-22 Score=128.35 Aligned_cols=99 Identities=14% Similarity=0.139 Sum_probs=85.5
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHH
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELF 106 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~ 106 (273)
..++++ +|.+++|...| +.|+|||+||.+ ..| .+.|+++|+|+++|+||||.|+.+ .++.++
T Consensus 3 ~~~~~~-~G~~l~y~~~G--------~G~pvlllHG~~----~~w---~~~L~~~yrvi~~DlpG~G~S~~p--~~s~~~ 64 (122)
T d2dsta1 3 AGYLHL-YGLNLVFDRVG--------KGPPVLLVAEEA----SRW---PEALPEGYAFYLLDLPGYGRTEGP--RMAPEE 64 (122)
T ss_dssp EEEEEE-TTEEEEEEEEC--------CSSEEEEESSSG----GGC---CSCCCTTSEEEEECCTTSTTCCCC--CCCHHH
T ss_pred ceEEEE-CCEEEEEEEEc--------CCCcEEEEeccc----ccc---cccccCCeEEEEEeccccCCCCCc--ccccch
Confidence 356788 99999999986 678999999843 333 456778899999999999999754 578899
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCC
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWP 143 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 143 (273)
+++++.+++++++.++++++||||||.+++.+++..+
T Consensus 65 ~a~~i~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~ 101 (122)
T d2dsta1 65 LAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGL 101 (122)
T ss_dssp HHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTC
T ss_pred hHHHHHHHHHHhCCCCcEEEEeCccHHHHHHHHhhcc
Confidence 9999999999999999999999999999999998654
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.87 E-value=3e-24 Score=163.38 Aligned_cols=232 Identities=13% Similarity=0.107 Sum_probs=132.8
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH-------HHHhh-cCCCeEEeecCCCCCCCCCCCccccHH
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK-------QVQFF-APHFNVYVPDLIFFGHSTTRSIQRTEL 105 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~-------~~~~l-~~~~~v~~~d~~g~g~s~~~~~~~~~~ 105 (273)
++..++|+... ++++++|||+||++.+. ..|+. ++..+ +++|+|+++|+||||.|..+....+..
T Consensus 44 ~~~~v~~~~p~------~~~~~PvvllHG~~~~~-~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~ 116 (318)
T d1qlwa_ 44 DQMYVRYQIPQ------RAKRYPITLIHGCCLTG-MTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAV 116 (318)
T ss_dssp SCEEEEEEEET------TCCSSCEEEECCTTCCG-GGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHH
T ss_pred ceEEEEEECCC------CCCCCcEEEECCCCCCc-CccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCccccCCHH
Confidence 55556666543 44567799999999988 78754 34444 455999999999999998766555555
Q ss_pred HHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCcc-cceEEEecCCCCCCCc---c--hHHHhhhhhhhhhhh
Q 024042 106 FQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPER-VEKVVIASSGVNMKRG---D--NEALVKRANLERIDH 177 (273)
Q Consensus 106 ~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~-v~~~v~~~~~~~~~~~---~--~~~~~~~~~~~~~~~ 177 (273)
...+++.+.++.+.. .+..++|||+||.++..++...... ...+++.++....... . ...............
T Consensus 117 ~~~~~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (318)
T d1qlwa_ 117 KLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLDGT 196 (318)
T ss_dssp HTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHTSE
T ss_pred HHHHHHHHHHHHHhhcccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHHHHHHHHhhhccc
Confidence 555555555554432 4577889999999888777654332 2222222221111100 0 000000000000000
Q ss_pred cc----CCCChHHHHHH-hhhhh------ccCCCCChhhHHhhhhccEEEEecCCCCCCChHH-----HHHHHHH---hc
Q 024042 178 LM----LPESASQLRTL-TGLAV------SKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKM-----ATELKEL---LG 238 (273)
Q Consensus 178 ~~----~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~-----~~~~~~~---~~ 238 (273)
.. ........... ..... .......+......+..|+|+++|++|..+|... .+.+.+. .+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g 276 (318)
T d1qlwa_ 197 VLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAG 276 (318)
T ss_dssp EEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTT
T ss_pred cchhhhcccchhhhhhhhhhhHHHHHHhhhcccccchhhhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHhC
Confidence 00 00000000000 00000 0011123444455667799999999999998532 2333333 34
Q ss_pred CCcEEEEeC-----CCCCCcCcCCh-hhHHHHHHHHhccc
Q 024042 239 KKARLEIIE-----NTSHVPQIENP-GLFNSIVKNFLRGS 272 (273)
Q Consensus 239 ~~~~~~~~~-----~~gH~~~~~~~-~~~~~~i~~fl~~~ 272 (273)
.+++++.+| |+||+++.|.+ +++++.|.+||+++
T Consensus 277 ~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~ 316 (318)
T d1qlwa_ 277 GKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRN 316 (318)
T ss_dssp CCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHT
T ss_pred CCcEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHhc
Confidence 788898866 57799988764 89999999999976
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.86 E-value=6.3e-20 Score=139.07 Aligned_cols=233 Identities=15% Similarity=0.156 Sum_probs=150.7
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCCCchh------------HhHHHHH---HhhcCC-CeEEeecCCCCCCCCCC
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI------------WQWRKQV---QFFAPH-FNVYVPDLIFFGHSTTR 98 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~------------~~~~~~~---~~l~~~-~~v~~~d~~g~g~s~~~ 98 (273)
+.+|.|..+|.. ...+.++||++|++.++.. .-|..++ ..|... |-||++|..|.|.|+.+
T Consensus 26 ~~~l~Y~t~G~l---n~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~ 102 (362)
T d2pl5a1 26 PVVIAYETYGTL---SSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSG 102 (362)
T ss_dssp SEEEEEEEEECC---CTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSS
T ss_pred CceEEEEeeecc---CCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccC
Confidence 456789998832 2334579999999887641 1233333 345445 99999999998776532
Q ss_pred C---------------ccccHHHHHHHHHHHHHHhCCccEE-EEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc
Q 024042 99 S---------------IQRTELFQAASLGKLLEKIGVERFS-VVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD 162 (273)
Q Consensus 99 ~---------------~~~~~~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~ 162 (273)
+ +..++.+.++.-..++++++++++. ++|.||||+.|+++|..+|+.++.+|.+++........
T Consensus 103 ~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~ 182 (362)
T d2pl5a1 103 PLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQ 182 (362)
T ss_dssp TTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHH
T ss_pred ccccccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHHH
Confidence 2 1246778888888999999999987 67999999999999999999999999999876543221
Q ss_pred hHHHhhhh----h-hhhhhhc-cCC------------------CChHHHHHHhhh-------------------------
Q 024042 163 NEALVKRA----N-LERIDHL-MLP------------------ESASQLRTLTGL------------------------- 193 (273)
Q Consensus 163 ~~~~~~~~----~-~~~~~~~-~~~------------------~~~~~~~~~~~~------------------------- 193 (273)
..+.... . ...+... +.. .....++.....
T Consensus 183 -~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~ 261 (362)
T d2pl5a1 183 -IAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESF 261 (362)
T ss_dssp -HHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCS
T ss_pred -HHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHHH
Confidence 0000000 0 0000000 000 001111111000
Q ss_pred ---------------hhccCCCC--ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeC-CCCCC
Q 024042 194 ---------------AVSKNLDI--VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIE-NTSHV 252 (273)
Q Consensus 194 ---------------~~~~~~~~--~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~-~~gH~ 252 (273)
........ .-...+.++..|+|+|..+.|.+.|++..+.+++.+ +.++++++++ ..||.
T Consensus 262 ~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~GHd 341 (362)
T d2pl5a1 262 VDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHD 341 (362)
T ss_dssp SSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSG
T ss_pred HhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcc
Confidence 00000000 001124455569999999999999999999999888 2456777775 37998
Q ss_pred cCcCChhhHHHHHHHHhcc
Q 024042 253 PQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 253 ~~~~~~~~~~~~i~~fl~~ 271 (273)
.++.+.+++.+.|.+||++
T Consensus 342 aFL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 342 SFLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp GGGSCCHHHHHHHHHHHHC
T ss_pred hhccCHHHHHHHHHHHHcC
Confidence 8888889999999999975
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.84 E-value=1.2e-19 Score=134.13 Aligned_cols=196 Identities=14% Similarity=0.133 Sum_probs=118.4
Q ss_pred CCCCCeEEEEcCCCC-----chhHhHHH----HHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC
Q 024042 51 TLKKPSLVLIHGFGP-----EAIWQWRK----QVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV 120 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~-----~~~~~~~~----~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (273)
++++|+||++||++. +. ..|.. +...+.+. +.|+++|+|..+.... ....++..+.+..+.+..+.
T Consensus 28 ~~~~~~vv~iHGGg~~~~~~~~-~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~---~~~~~d~~~~~~~l~~~~~~ 103 (263)
T d1vkha_ 28 QNTREAVIYIHGGAWNDPENTP-NDFNQLANTIKSMDTESTVCQYSIEYRLSPEITN---PRNLYDAVSNITRLVKEKGL 103 (263)
T ss_dssp TTCCEEEEEECCSTTTCTTCCG-GGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT---THHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcEEEEECCCCccCCCCCc-chHHHHHHHHHHHHHhCCeEEEEeccccCcchhh---hHHHHhhhhhhhcccccccc
Confidence 567899999999541 22 33433 44455455 9999999997655432 23566667777777788888
Q ss_pred ccEEEEEeccchHHHHHHHHhCCcc-----------------cceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCC
Q 024042 121 ERFSVVGTSYGGFVAYHMARMWPER-----------------VEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPES 183 (273)
Q Consensus 121 ~~i~l~G~S~Gg~~a~~~a~~~~~~-----------------v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
++++++|||+||.+|+.++...++. +...+...+.... ........ ..
T Consensus 104 ~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~----------~~ 168 (263)
T d1vkha_ 104 TNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSL-----KELLIEYP----------EY 168 (263)
T ss_dssp CCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCH-----HHHHHHCG----------GG
T ss_pred cceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccc-----hhhhhhcc----------cc
Confidence 9999999999999999998866542 2222222222111 11110000 00
Q ss_pred hHHHHHHhhhhhccCCCC------ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcC
Q 024042 184 ASQLRTLTGLAVSKNLDI------VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQ 254 (273)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~ 254 (273)
.................. ...........|+++++|++|.++|.+.+..+.+++ +.+++++++++++|...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g~~~~~~~~~~~~H~~~ 248 (263)
T d1vkha_ 169 DCFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDV 248 (263)
T ss_dssp HHHHHHHCTTCGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGG
T ss_pred chhhhcccccccccccccccccCccccccccccCCCeeeeecCCCcccCHHHHHHHHHHHHHCCCCEEEEEECCCCchhh
Confidence 000000000000000000 011223445569999999999999999999998877 45789999999999766
Q ss_pred cCChhhHHHHHH
Q 024042 255 IENPGLFNSIVK 266 (273)
Q Consensus 255 ~~~~~~~~~~i~ 266 (273)
+++. ++.+.|.
T Consensus 249 ~~~~-~~~~~i~ 259 (263)
T d1vkha_ 249 YKNG-KVAKYIF 259 (263)
T ss_dssp GGCH-HHHHHHH
T ss_pred hcCh-HHHHHHH
Confidence 6553 4555443
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.83 E-value=1.6e-19 Score=129.39 Aligned_cols=177 Identities=18% Similarity=0.219 Sum_probs=113.8
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC---CeEEeecCCC--------CC-CCC-----C-CCccc---cHHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH---FNVYVPDLIF--------FG-HST-----T-RSIQR---TELFQAA 109 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~---~~v~~~d~~g--------~g-~s~-----~-~~~~~---~~~~~~~ 109 (273)
.+.+++||++||+|++. ..+..+.+.|.+. ..+++++-|. .. .+. . ..... ..+...+
T Consensus 11 ~~~~~~Vi~lHG~G~~~-~~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 89 (218)
T d1auoa_ 11 KPADACVIWLHGLGADR-YDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAK 89 (218)
T ss_dssp SCCSEEEEEECCTTCCT-TTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHH
T ss_pred CCCCeEEEEEcCCCCCh-hhHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHH
Confidence 34567999999999998 8888888877654 3455554321 10 000 0 01111 2222233
Q ss_pred HHHHHHHH---h--CCccEEEEEeccchHHHHHHHHh-CCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCC
Q 024042 110 SLGKLLEK---I--GVERFSVVGTSYGGFVAYHMARM-WPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPES 183 (273)
Q Consensus 110 ~~~~~~~~---~--~~~~i~l~G~S~Gg~~a~~~a~~-~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
.+.++++. . +.++++++|+|+||.+|+.++.. .+..+.+++.+++........ ....
T Consensus 90 ~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~-----------------~~~~ 152 (218)
T d1auoa_ 90 MVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDE-----------------LELS 152 (218)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTT-----------------CCCC
T ss_pred HHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCcccccc-----------------cccc
Confidence 33444332 2 34899999999999999988754 466789999988754321110 0000
Q ss_pred hHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhh
Q 024042 184 ASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGL 260 (273)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~ 260 (273)
......|++++||++|.++|.+..+++.+.+ +.+++++.++ +||... + +
T Consensus 153 -----------------------~~~~~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i~---~-~ 204 (218)
T d1auoa_ 153 -----------------------ASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL---P-Q 204 (218)
T ss_dssp -----------------------HHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCC---H-H
T ss_pred -----------------------hhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEEC-CCCccC---H-H
Confidence 0011229999999999999999998888877 3467999997 789653 3 4
Q ss_pred HHHHHHHHhcccC
Q 024042 261 FNSIVKNFLRGSL 273 (273)
Q Consensus 261 ~~~~i~~fl~~~l 273 (273)
..+.+.+||.++|
T Consensus 205 ~~~~i~~wl~~~l 217 (218)
T d1auoa_ 205 EIHDIGAWLAARL 217 (218)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 4567889998754
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.82 E-value=1.6e-18 Score=133.27 Aligned_cols=242 Identities=14% Similarity=-0.004 Sum_probs=134.4
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCC---ch-hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCC-
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP---EA-IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRS- 99 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~---~~-~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~- 99 (273)
+..++...||..+..+.+.|+. .+++.|+||++||.|. +. ...+..+...+.+. +.|+++|||..+...+..
T Consensus 80 ~~~~i~~~dg~~i~~~iy~P~~--~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe~~ 157 (358)
T d1jkma_ 80 STETILGVDGNEITLHVFRPAG--VEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHP 157 (358)
T ss_dssp EEEEEECTTSCEEEEEEEEETT--CCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECC
T ss_pred EEEEEeCCCCCEEEEEEEecCC--CCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeecccccccccCC
Confidence 3445566689888877765432 2345689999999753 21 13456666766665 999999999763322111
Q ss_pred ccccHHHHHHHHH---HHHHHhCCccEEEEEeccchHHHHHHHHh-----CCcccceEEEecCCCCCCCcchHHHhhhhh
Q 024042 100 IQRTELFQAASLG---KLLEKIGVERFSVVGTSYGGFVAYHMARM-----WPERVEKVVIASSGVNMKRGDNEALVKRAN 171 (273)
Q Consensus 100 ~~~~~~~~~~~~~---~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-----~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~ 171 (273)
-...+++..+.+. +....++.++++|+|+|.||++|+.++.. ....+.++++..|.................
T Consensus 158 ~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 237 (358)
T d1jkma_ 158 FPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTEL 237 (358)
T ss_dssp TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHHC
T ss_pred CchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceeccccCccchhhcccc
Confidence 1122333333333 33334577899999999999999877654 234578888888876654332211111100
Q ss_pred hhhhhhccCCCChHHHHHHhhhhhccCC-----CCChhh---HHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCC
Q 024042 172 LERIDHLMLPESASQLRTLTGLAVSKNL-----DIVPDF---FFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKK 240 (273)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~ 240 (273)
............................ ...+.. ....-..|+++++|+.|.+. +.+..+++++ +..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~lPp~li~~g~~D~l~--~e~~~~~~~L~~aGv~ 315 (358)
T d1jkma_ 238 PSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNELDPLR--DEGIAFARRLARAGVD 315 (358)
T ss_dssp THHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEETTCTTH--HHHHHHHHHHHHTTCC
T ss_pred cchhcccccccchhhhhhHHhhcCCccCCccCccccccccchhhccCCCCEEEEECCCCCCH--HHHHHHHHHHHHCCCc
Confidence 0000111111112222222211111100 000000 01112239999999999764 4556666655 478
Q ss_pred cEEEEeCCCCCCcCc-------CChhhHHHHHHHHhcc
Q 024042 241 ARLEIIENTSHVPQI-------ENPGLFNSIVKNFLRG 271 (273)
Q Consensus 241 ~~~~~~~~~gH~~~~-------~~~~~~~~~i~~fl~~ 271 (273)
++++++++.+|.+.. +..++..+.|..|+.+
T Consensus 316 v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~ 353 (358)
T d1jkma_ 316 VAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAAD 353 (358)
T ss_dssp EEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHH
Confidence 999999999996421 1224567788888865
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.80 E-value=3e-19 Score=132.89 Aligned_cols=201 Identities=10% Similarity=0.062 Sum_probs=123.8
Q ss_pred CCCCCeEEEEcCCCCchhH-hHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEe
Q 024042 51 TLKKPSLVLIHGFGPEAIW-QWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGT 128 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~ 128 (273)
...+++|||+||++.+... .|..+.+.|.+. |.|+.+|++|+|.++. ..+.++.++.+..+++..+.+++.|+||
T Consensus 28 ~~~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~---~~sae~la~~i~~v~~~~g~~kV~lVGh 104 (317)
T d1tcaa_ 28 SSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDT---QVNTEYMVNAITALYAGSGNNKLPVLTW 104 (317)
T ss_dssp TSCSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCH---HHHHHHHHHHHHHHHHHTTSCCEEEEEE
T ss_pred CCCCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCch---HhHHHHHHHHHHHHHHhccCCceEEEEe
Confidence 3455679999999877622 256688888887 9999999999987642 2345566667777777778899999999
Q ss_pred ccchHHHHHHHHhCCc---ccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhh
Q 024042 129 SYGGFVAYHMARMWPE---RVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDF 205 (273)
Q Consensus 129 S~Gg~~a~~~a~~~~~---~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (273)
||||.++..++.++|+ +|+.+|.+++........................ . .....++.+.... ...+
T Consensus 105 S~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~Gt~~a~~~~~~~~~~pa~~q~-~-~~s~fl~~L~~~~-----~~~~-- 175 (317)
T d1tcaa_ 105 SQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVWQQ-T-TGSALTTALRNAG-----GLTQ-- 175 (317)
T ss_dssp THHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHHHTTCBCHHHHHT-B-TTCHHHHHHHHTT-----TTBC--
T ss_pred CchHHHHHHHHHHCCCcchheeEEEEeCCCCCCcccccchhhhhccCchhhhh-c-CCcHHHHHHHhCC-----CCCC--
Confidence 9999999999998874 6999999998765432211100000000000000 0 0011111111100 0000
Q ss_pred HHhhhhccEEEEecCCCCCCChHHHHHHHHHh-cCCcEEEEe-------CCCCCCcCcCChhhHHHHHHHHh
Q 024042 206 FFNDFVHDVLIVWGDQDQIFPLKMATELKELL-GKKARLEII-------ENTSHVPQIENPGLFNSIVKNFL 269 (273)
Q Consensus 206 ~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~gH~~~~~~~~~~~~~i~~fl 269 (273)
..|.+.|++..|.+|.+.....+.+.. .++++-+.+ +-.+|..+..+|.. ...+.+-|
T Consensus 176 -----~V~~t~I~s~~D~iV~P~~~~~~~~~~~~~~~~Ni~vq~~c~~~~~~~H~~l~~~p~~-~~~v~daL 241 (317)
T d1tcaa_ 176 -----IVPTTNLYSATDEIVQPQVSNSPLDSSYLFNGKNVQAQAVCGPLFVIDHAGSLTSQFS-YVVGRSAL 241 (317)
T ss_dssp -----SSCEEEEECTTCSSSCCCCSSSTTSTTCCBTSEEEEHHHHHCTTCCCCTTHHHHBHHH-HHHHHHHH
T ss_pred -----CCCEEEEecCCCcccCccccchhccccCCCCceeEEeecccCCCCcCCccccccCHHH-HHHHHHHH
Confidence 128999999999999876544433222 245666665 23589877777753 34444444
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.80 E-value=8.2e-19 Score=128.53 Aligned_cols=187 Identities=16% Similarity=0.111 Sum_probs=118.1
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHH
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAAS 110 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 110 (273)
..++..+... +.+.|+|||+||.+ ++. ..+..++..|.+. |.|+.+|+|..+.... ....++..+.
T Consensus 49 ~~~lDiy~P~------~~~~P~vv~iHGG~w~~g~~-~~~~~~a~~l~~~G~~Vv~~~YRl~p~~~~---p~~~~d~~~a 118 (261)
T d2pbla1 49 RHKFDLFLPE------GTPVGLFVFVHGGYWMAFDK-SSWSHLAVGALSKGWAVAMPSYELCPEVRI---SEITQQISQA 118 (261)
T ss_dssp TCEEEEECCS------SSCSEEEEEECCSTTTSCCG-GGCGGGGHHHHHTTEEEEEECCCCTTTSCH---HHHHHHHHHH
T ss_pred CeEEEEeccC------CCCCCeEEEECCCCCccCCh-hHhhhHHHHHhcCCceeecccccccccccC---chhHHHHHHH
Confidence 3455555542 45679999999954 344 5666677777666 9999999996544321 1233333333
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHHhCC------cccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCCh
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWP------ERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESA 184 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~------~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (273)
+..+.+.. .++|+++|||.||++|..++.... ..+++++.+++............. .. .....
T Consensus 119 ~~~~~~~~-~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~ 187 (261)
T d2pbla1 119 VTAAAKEI-DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMN---------EK-FKMDA 187 (261)
T ss_dssp HHHHHHHS-CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTTH---------HH-HCCCH
T ss_pred HHHHHhcc-cCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhhhhc---------cc-ccCCH
Confidence 33333333 489999999999999987765432 347888888887665432111000 00 01111
Q ss_pred HHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc
Q 024042 185 SQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255 (273)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 255 (273)
...... .|.........|+++++|++|..++.++++.+.+.+ +++.+.+++.+||-.+
T Consensus 188 ~~~~~~-----------SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~l--~~~~~~~~~~~HF~vi 245 (261)
T d2pbla1 188 DAAIAE-----------SPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAW--DADHVIAFEKHHFNVI 245 (261)
T ss_dssp HHHHHT-----------CGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHH--TCEEEEETTCCTTTTT
T ss_pred HHHHHh-----------CchhhcccCCCeEEEEEecCCCchHHHHHHHHHHHh--CCCceEeCCCCchhHH
Confidence 211111 222223334459999999999988888999999988 5778889999997544
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.76 E-value=1.7e-17 Score=125.64 Aligned_cols=238 Identities=16% Similarity=0.060 Sum_probs=124.1
Q ss_pred CCceeEEec--CCcc-eEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhc-C-CCeEEeecCCCCCCC
Q 024042 24 GLSSQTIDI--DDET-TLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFA-P-HFNVYVPDLIFFGHS 95 (273)
Q Consensus 24 ~~~~~~~~~--~~g~-~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~-~-~~~v~~~d~~g~g~s 95 (273)
+++.+.+++ .+|. .+..+.+.|+. ..++.|+||++||.| ++. ..+..+...+. + +|.|+.+|+|...+.
T Consensus 47 ~v~~~~~~~~~~~g~~~i~~~~~~P~~--~~~~~Pvvv~iHGGG~~~g~~-~~~~~~~~~la~~~G~~V~~vdYrl~pe~ 123 (317)
T d1lzla_ 47 GVSLRELSAPGLDGDPEVKIRFVTPDN--TAGPVPVLLWIHGGGFAIGTA-ESSDPFCVEVARELGFAVANVEYRLAPET 123 (317)
T ss_dssp TEEEEEEEECCSTTCCCEEEEEEEESS--CCSCEEEEEEECCSTTTSCCG-GGGHHHHHHHHHHHCCEEEEECCCCTTTS
T ss_pred CceEEEEEEecCCCCceEEEEEECCCC--CCCCCcEEEEecCcccccccc-cccchHHHhHHhhcCCccccccccccccc
Confidence 445555554 4553 46655554321 234568999999964 344 45555555553 4 599999999987665
Q ss_pred CCCCccccHHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCc----ccceEEEecCCCCCCCcchHHHhhh
Q 024042 96 TTRSIQRTELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPE----RVEKVVIASSGVNMKRGDNEALVKR 169 (273)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~~~~~~~~~~~~ 169 (273)
..+....+..+....+.+..+.++. ++|+++|+|.||++++.++...++ .....++..+......... .....
T Consensus 124 ~~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~ 202 (317)
T d1lzla_ 124 TFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETV-SMTNF 202 (317)
T ss_dssp CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSH-HHHHC
T ss_pred cccccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhccccccccccccccccccccccc-ccccc
Confidence 4333222333344444444455544 689999999999999988875422 1233333333322221111 11000
Q ss_pred hhhhhhhhccCCCChHHHH---HHhhhhhccCC--C----CChhhH-HhhhhccEEEEecCCCCCCChHHHHHHHHHh--
Q 024042 170 ANLERIDHLMLPESASQLR---TLTGLAVSKNL--D----IVPDFF-FNDFVHDVLIVWGDQDQIFPLKMATELKELL-- 237 (273)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~----~~~~~~-~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~-- 237 (273)
. ............ ........... . ..+... ......|+++++|+.|.+ .+.++.+.+++
T Consensus 203 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~li~~g~~D~l--~~~~~~~~~~L~~ 274 (317)
T d1lzla_ 203 V------DTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPL--RDEGIEYALRLLQ 274 (317)
T ss_dssp S------SCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEETTCTT--HHHHHHHHHHHHH
T ss_pred c------ccchhhhhhhHHHHhhhccccccCCCCchhccccCchhhhhccCCCCeEEEECCCCCC--HHHHHHHHHHHHH
Confidence 0 000000000000 00000000000 0 000000 011224999999999955 55667776666
Q ss_pred -cCCcEEEEeCCCCCCcCc-C-Ch--hhHHHHHHHHhcccC
Q 024042 238 -GKKARLEIIENTSHVPQI-E-NP--GLFNSIVKNFLRGSL 273 (273)
Q Consensus 238 -~~~~~~~~~~~~gH~~~~-~-~~--~~~~~~i~~fl~~~l 273 (273)
+..++++++++++|.+.. . .+ ++..+.+.+||++.|
T Consensus 275 ~G~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~l~r~L 315 (317)
T d1lzla_ 275 AGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGL 315 (317)
T ss_dssp TTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECcCccCCcccCCchHHHHHHHHHHHHHHHHh
Confidence 567999999999996532 2 12 234455667776653
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.76 E-value=8.5e-17 Score=119.54 Aligned_cols=242 Identities=12% Similarity=0.012 Sum_probs=132.2
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-h-HhHHHHHHhhcCC-CeEEeecCCCCCCCCCC----
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-I-WQWRKQVQFFAPH-FNVYVPDLIFFGHSTTR---- 98 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~-~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~---- 98 (273)
+..+++..||.+|.++.+.|++...+++.|+||++||.++.. . .........+... +.+...+.++.......
T Consensus 8 e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (280)
T d1qfma2 8 VQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKG 87 (280)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHT
T ss_pred EEEEEECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccccccccchhhhhc
Confidence 344556679999999888766544567789999999964332 0 1112222233333 66666666543321100
Q ss_pred CccccHHHHHHHH----HHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh
Q 024042 99 SIQRTELFQAASL----GKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL 172 (273)
Q Consensus 99 ~~~~~~~~~~~~~----~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (273)
..........++. ....... .....+++|.|.||..+...+...++.+++++...+...............
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 164 (280)
T d1qfma2 88 GILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHA--- 164 (280)
T ss_dssp TSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGG---
T ss_pred ccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccchhhhcccccccc---
Confidence 0011111111121 1112222 226788999999999999999999888888888777665432211110000
Q ss_pred hhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh----------cCCcE
Q 024042 173 ERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL----------GKKAR 242 (273)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~----------~~~~~ 242 (273)
........................ ...+.........|+|++||++|..||..++.++.+++ +..++
T Consensus 165 -~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~ 241 (280)
T d1qfma2 165 -WTTDYGCSDSKQHFEWLIKYSPLH--NVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLL 241 (280)
T ss_dssp -GHHHHCCTTSHHHHHHHHHHCGGG--CCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEE
T ss_pred -ceecccCCCccccccccccccccc--ccchhhhcccCCCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEE
Confidence 000011111111111111111111 01111112222338999999999999999999988887 34578
Q ss_pred EEEeCCCCCCcCcCChh--hHHHHHHHHhcccC
Q 024042 243 LEIIENTSHVPQIENPG--LFNSIVKNFLRGSL 273 (273)
Q Consensus 243 ~~~~~~~gH~~~~~~~~--~~~~~i~~fl~~~l 273 (273)
+++++++||.+.....+ +....+.+||+++|
T Consensus 242 l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L 274 (280)
T d1qfma2 242 IHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCL 274 (280)
T ss_dssp EEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhc
Confidence 99999999975432222 23345678988764
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.75 E-value=2.4e-18 Score=130.05 Aligned_cols=103 Identities=20% Similarity=0.301 Sum_probs=88.0
Q ss_pred CCCCeEEEEcCCCCchhH------hHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEE
Q 024042 52 LKKPSLVLIHGFGPEAIW------QWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFS 124 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~------~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 124 (273)
+.+.+|||+||++++. . .|..+.+.|.+. |+|+++|+||+|.|.... ...++.++++.++++..+.++++
T Consensus 6 ~~k~PvvlvHG~~g~~-~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~--~~~~~l~~~i~~~~~~~~~~~v~ 82 (319)
T d1cvla_ 6 ATRYPVILVHGLAGTD-KFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPN--GRGEQLLAYVKQVLAATGATKVN 82 (319)
T ss_dssp CCSSCEEEECCTTBSS-EETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTT--SHHHHHHHHHHHHHHHHCCSCEE
T ss_pred CCCCCEEEECCCCCCc-chhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCc--ccHHHHHHHHHHHHHHhCCCCEE
Confidence 3455789999998765 3 367788888887 999999999999887543 35677888899999999999999
Q ss_pred EEEeccchHHHHHHHHhCCcccceEEEecCCCC
Q 024042 125 VVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 125 l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
++||||||.++..++.++|++++++|+++++..
T Consensus 83 lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~~ 115 (319)
T d1cvla_ 83 LIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHR 115 (319)
T ss_dssp EEEETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred EEeccccHHHHHHHHHHCccccceEEEECCCCC
Confidence 999999999999999999999999999988643
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.74 E-value=5.1e-17 Score=122.49 Aligned_cols=229 Identities=14% Similarity=0.034 Sum_probs=129.2
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~ 100 (273)
+..++..++| .+..+.+.| .++.|+||++||+| ++. ..+..+...+.+ ++.|+.+|+|...+...+..
T Consensus 57 ~~~~i~~~~g-~i~~~iy~P-----~~~~P~il~iHGGg~~~g~~-~~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~~p~~ 129 (311)
T d1jjia_ 57 EDRTIKGRNG-DIRVRVYQQ-----KPDSPVLVYYHGGGFVICSI-ESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAA 129 (311)
T ss_dssp EEEEEEETTE-EEEEEEEES-----SSSEEEEEEECCSTTTSCCT-GGGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHH
T ss_pred EEEEEeCCCC-cEEEEEEcC-----CCCceEEEEEcCCCCccCCh-hhhhhhhhhhhhcCCcEEEEeccccccccccchh
Confidence 3455666566 566555542 34568999999965 344 455556555533 49999999996554433322
Q ss_pred cccHHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC----CcccceEEEecCCCCCCCcchHHHhhhhhhhh
Q 024042 101 QRTELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW----PERVEKVVIASSGVNMKRGDNEALVKRANLER 174 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~----~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (273)
..+.....+++.+..+.++. ++++++|+|.||.+++.++... .....+.+++.|...............
T Consensus 130 ~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~----- 204 (311)
T d1jjia_ 130 VYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLEFG----- 204 (311)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHHTS-----
T ss_pred hhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeeeccCcccccccc-----
Confidence 22333334444444445544 6899999999999888776543 234678888888877654322111100
Q ss_pred hhhccCCCChHHHHHHhhhhhc-----cCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEe
Q 024042 175 IDHLMLPESASQLRTLTGLAVS-----KNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEII 246 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~ 246 (273)
.................... ......+......-..|+++++|+.|.++ +.+..+.+++ +..++++++
T Consensus 205 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~l~--d~~~~~~~~L~~~Gv~v~~~~~ 280 (311)
T d1jjia_ 205 --EGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENLPPALIITAEYDPLR--DEGEVFGQMLRRAGVEASIVRY 280 (311)
T ss_dssp --SSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTCCCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEE
T ss_pred --cccccccHHHhhhhhhhcccccccccccccchhhcccccCCCEEEEEcCCCCCh--HHHHHHHHHHHHCCCCEEEEEE
Confidence 00011111111111111100 00011121111122339999999999764 4556666655 577899999
Q ss_pred CCCCCCcCc-----CChhhHHHHHHHHhc
Q 024042 247 ENTSHVPQI-----ENPGLFNSIVKNFLR 270 (273)
Q Consensus 247 ~~~gH~~~~-----~~~~~~~~~i~~fl~ 270 (273)
+|.+|.++. +...+..+.+.+||.
T Consensus 281 ~g~~H~F~~~~~~~~~a~~a~~~i~~fl~ 309 (311)
T d1jjia_ 281 RGVLHGFINYYPVLKAARDAINQIAALLV 309 (311)
T ss_dssp EEEETTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCccccCCCcCHHHHHHHHHHHHHhC
Confidence 999996432 123466777788873
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.73 E-value=6.3e-17 Score=124.10 Aligned_cols=128 Identities=11% Similarity=0.079 Sum_probs=94.2
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHh---HHHHHHhhcCC-CeEEeecCCCCCCCCCCCccc-
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQ---WRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQR- 102 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~---~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~- 102 (273)
..|+..||++|....+.|+ ..++.|+||+.||++...... +......|.++ |.|+++|.||.|.|.+.....
T Consensus 8 v~ipmrDGv~L~~~vy~P~---~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~~~ 84 (347)
T d1ju3a2 8 VMVPMRDGVRLAVDLYRPD---ADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHV 84 (347)
T ss_dssp EEEECTTSCEEEEEEEEEC---CSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCTTT
T ss_pred eEEECCCCCEEEEEEEEcC---CCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCcccccc
Confidence 4677789999999888743 345678999999976532122 22233445455 999999999999999765432
Q ss_pred cHHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 103 TELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
.......++.+++..... .+|.++|+|+||.+++.+|...|..+++++...+..+.
T Consensus 85 ~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~ 142 (347)
T d1ju3a2 85 DDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADL 142 (347)
T ss_dssp THHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCT
T ss_pred chhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccchh
Confidence 334445556666665533 68999999999999999999988889999998887754
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.73 E-value=1.1e-17 Score=126.24 Aligned_cols=233 Identities=15% Similarity=0.080 Sum_probs=125.7
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcCC--CeEEeecCCCCCCCCCCCc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAPH--FNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~ 100 (273)
+..+++. +|.++....+.|++ .+++.|+||++||.+ ++. ..+..+...+... +.|+.+|+|.......+.
T Consensus 47 ~~~~~~~-~g~~i~~~~y~P~~--~~~~~Pvvv~iHGGg~~~g~~-~~~~~~~~~~a~~~~~~v~~v~Yrl~p~~~~p~- 121 (308)
T d1u4na_ 47 REFDMDL-PGRTLKVRMYRPEG--VEPPYPALVYYHGGGWVVGDL-ETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPA- 121 (308)
T ss_dssp EEEEEEE-TTEEEEEEEEECTT--CCSSEEEEEEECCSTTTSCCT-TTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTH-
T ss_pred EEEEEec-CCceEEEEEEeccc--cCCCCCEEEEEecCeeeeecc-ccccchhhhhhhccccccccccccccccccccc-
Confidence 3445555 67666665554322 244678999999965 344 5566666666554 678889998654433222
Q ss_pred cccHHHHHHHHHHHHH---Hh--CCccEEEEEeccchHHHHHHHHhCCc----ccceEEEecCCCCCCCcchHHHhhhhh
Q 024042 101 QRTELFQAASLGKLLE---KI--GVERFSVVGTSYGGFVAYHMARMWPE----RVEKVVIASSGVNMKRGDNEALVKRAN 171 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~---~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~~~~~~~~~~~~~~ 171 (273)
..++..+.+..+.+ .+ +.++++++|+|.||.+++.++....+ .+.+..++.+.................
T Consensus 122 --~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (308)
T d1u4na_ 122 --AVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIEENA 199 (308)
T ss_dssp --HHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCCCTTSCCHHHHHTS
T ss_pred --ccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccccccccccccchhhhcc
Confidence 22232222322222 22 23689999999999999888765432 356666776665543322111111000
Q ss_pred hhhhhhccCCCChHHHHHHhhhhhccCC----CCChhhHHh--hhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcE
Q 024042 172 LERIDHLMLPESASQLRTLTGLAVSKNL----DIVPDFFFN--DFVHDVLIVWGDQDQIFPLKMATELKELL---GKKAR 242 (273)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~ 242 (273)
. ..................... ......... .-..|+++++|+.|.++ +.++.+.+++ +..++
T Consensus 200 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~d~~~~Pp~li~~g~~D~l~--~~~~~~~~~L~~~G~~v~ 271 (308)
T d1u4na_ 200 -----E-GYLLTGGMSLWFLDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLR--DVGKLYAEALNKAGVKVE 271 (308)
T ss_dssp -----S-SSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTCCCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEE
T ss_pred -----c-cccccchhhhhhhhcccCccccccchhhhhhhchhhcCCCCeeEEecCcCCch--HHHHHHHHHHHHCCCCEE
Confidence 0 000111111111110000000 000000000 11128999999999764 4566666665 46789
Q ss_pred EEEeCCCCCCcCc-----CChhhHHHHHHHHhcccC
Q 024042 243 LEIIENTSHVPQI-----ENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 243 ~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~l 273 (273)
++++++.+|.+.. ...++..+.+.+||++.|
T Consensus 272 ~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~L 307 (308)
T d1u4na_ 272 IENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 307 (308)
T ss_dssp EEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHhh
Confidence 9999999996432 122467778888998753
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.71 E-value=1.6e-15 Score=111.08 Aligned_cols=198 Identities=16% Similarity=0.137 Sum_probs=118.2
Q ss_pred ceeEEecC-CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHH-------HHHHhh-cC---C-CeEEeecCCCC
Q 024042 26 SSQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWR-------KQVQFF-AP---H-FNVYVPDLIFF 92 (273)
Q Consensus 26 ~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~-------~~~~~l-~~---~-~~v~~~d~~g~ 92 (273)
+...+..+ +|.+..|+.+-|++-..+++.|+|+++||.+++. ..|. .....+ .. . +.+...+.
T Consensus 23 ~~~~~~S~~~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 98 (255)
T d1jjfa_ 23 VNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSE-NDWFEGGGRANVIADNLIAEGKIKPLIIVTPNT--- 98 (255)
T ss_dssp EEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCT-TTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECC---
T ss_pred EEEEEEecCCCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCCh-HHhhhhhHHHHHHHHHHHhhccCCcceeeeccc---
Confidence 34444433 6888888888765544556779999999987665 3321 111111 11 1 23333222
Q ss_pred CCCCCCCcc---ccHHHHHHHHHHHHHHh-----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH
Q 024042 93 GHSTTRSIQ---RTELFQAASLGKLLEKI-----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE 164 (273)
Q Consensus 93 g~s~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~ 164 (273)
+........ .......+++...++.. +.++++++|+|+||..++.++.++|+++++++.+++........
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~~~~~~-- 176 (255)
T d1jjfa_ 99 NAAGPGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNE-- 176 (255)
T ss_dssp CCCCTTCSCHHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHH--
T ss_pred ccccccccccccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcCCcccc--
Confidence 222211111 12334455555555543 33679999999999999999999999999999998765433210
Q ss_pred HHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCc
Q 024042 165 ALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKA 241 (273)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~ 241 (273)
.. .. ...........|+++.+|++|..++. .+.+.+.+ +-+.
T Consensus 177 ~~-------------~~--------------------~~~~~~~~~~~~~~i~~G~~D~~~~~--~~~~~~~L~~~g~~~ 221 (255)
T d1jjfa_ 177 RL-------------FP--------------------DGGKAAREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNINH 221 (255)
T ss_dssp HH-------------CT--------------------TTTHHHHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCC
T ss_pred cc-------------cc--------------------cHHHHhhccCCcceEEeCCCCCCchH--HHHHHHHHHHCCCCE
Confidence 00 00 01111222333899999999988653 44555555 4678
Q ss_pred EEEEeCCCCCCcCcCChhhHHHHHHHHh
Q 024042 242 RLEIIENTSHVPQIENPGLFNSIVKNFL 269 (273)
Q Consensus 242 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl 269 (273)
++.+++++||... .+.+.+.+||
T Consensus 222 ~~~~~~~ggH~~~-----~W~~~l~~fl 244 (255)
T d1jjfa_ 222 VYWLIQGGGHDFN-----VWKPGLWNFL 244 (255)
T ss_dssp EEEEETTCCSSHH-----HHHHHHHHHH
T ss_pred EEEEECCCCcCHH-----HHHHHHHHHH
Confidence 9999999999742 2334555555
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.69 E-value=2.1e-17 Score=122.26 Aligned_cols=99 Identities=17% Similarity=0.181 Sum_probs=83.3
Q ss_pred CCCeEEEEcCCCCchh----HhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEE
Q 024042 53 KKPSLVLIHGFGPEAI----WQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVG 127 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~----~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G 127 (273)
.+.+|||+||++++.. ..|..+.+.|.+. |+|+++|++|+|.+. ...++..+++.++++..+.++++++|
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~-----~~a~~l~~~i~~~~~~~g~~~v~lig 80 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-----VRGEQLLQQVEEIVALSGQPKVNLIG 80 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-----HHHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcH-----HHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 4456999999877641 2377888888887 999999999988542 45566788888888899999999999
Q ss_pred eccchHHHHHHHHhCCcccceEEEecCCC
Q 024042 128 TSYGGFVAYHMARMWPERVEKVVIASSGV 156 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~ 156 (273)
|||||.++..++..+|++|++++.++++.
T Consensus 81 HS~GG~~~r~~~~~~p~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 81 HSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp ETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred ECccHHHHHHHHHHCCccceeEEEECCCC
Confidence 99999999999999999999999998764
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.68 E-value=1.1e-15 Score=118.18 Aligned_cols=128 Identities=14% Similarity=0.024 Sum_probs=87.9
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchh----------HhHHHHHHhhcCC-CeEEeecCCCCCCC
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI----------WQWRKQVQFFAPH-FNVYVPDLIFFGHS 95 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~----------~~~~~~~~~l~~~-~~v~~~d~~g~g~s 95 (273)
...|+..||++|....+.|+ ..++.|+||+.|+++.... ..+....+.|.++ |.|+.+|.||+|.|
T Consensus 26 ~v~i~~rDG~~L~~~v~~P~---~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S 102 (381)
T d1mpxa2 26 EVMIPMRDGVKLHTVIVLPK---GAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGS 102 (381)
T ss_dssp EEEEECTTSCEEEEEEEEET---TCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTC
T ss_pred EEEEECCCCCEEEEEEEEeC---CCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCC
Confidence 34667779999998877642 3456789999998764220 1112233455555 99999999999999
Q ss_pred CCCCccc-------------cHHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 96 TTRSIQR-------------TELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 96 ~~~~~~~-------------~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
.+..... ...+ ..++.+.+... ..++|.++|+|+||.+++.+|...|..++++|..++..+.
T Consensus 103 ~G~~~~~~~~~~~~~~~~~~~~~D-~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d~ 180 (381)
T d1mpxa2 103 EGDYVMTRPLRGPLNPSEVDHATD-AWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDG 180 (381)
T ss_dssp CSCCCTTCCCSBTTBCSSCCHHHH-HHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCCT
T ss_pred CCceeccchhhhhcccchhHHHHH-HHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeecccccc
Confidence 8643211 1222 22333333232 2268999999999999999999988889999999887654
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.61 E-value=2.8e-13 Score=105.35 Aligned_cols=194 Identities=16% Similarity=0.105 Sum_probs=115.6
Q ss_pred HhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC--------------------ccEEEEEeccchHH
Q 024042 76 QFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV--------------------ERFSVVGTSYGGFV 134 (273)
Q Consensus 76 ~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~i~l~G~S~Gg~~ 134 (273)
+.+.++ |.|+.+|.||.|.|.+.....+..+ .+|..++++.+.. .+|.++|+|+||..
T Consensus 130 ~~~~~~GYavv~~D~RG~g~S~G~~~~~~~~e-~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~ 208 (405)
T d1lnsa3 130 DYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQ-IYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTM 208 (405)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSCCCTTSHHH-HHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHH
T ss_pred HHHHhCCCEEEEECCCCCCCCCCccccCChhh-hhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHHH
Confidence 345555 9999999999999998765554443 5666667776632 37999999999999
Q ss_pred HHHHHHhCCcccceEEEecCCCCCCCcc----------------hHHHhhhhhhhhhh--hcc-C-CCChHHHHHHhhhh
Q 024042 135 AYHMARMWPERVEKVVIASSGVNMKRGD----------------NEALVKRANLERID--HLM-L-PESASQLRTLTGLA 194 (273)
Q Consensus 135 a~~~a~~~~~~v~~~v~~~~~~~~~~~~----------------~~~~~~~~~~~~~~--~~~-~-~~~~~~~~~~~~~~ 194 (273)
++.+|...|..++++|..++..+..... .............. ... . ..............
T Consensus 209 q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (405)
T d1lnsa3 209 AYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAAL 288 (405)
T ss_dssp HHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCccceEEEecCccccHHHHhhcCCccccccchhhhhhhhhhccccccccccchhhhchhhhhhccchhhhhh
Confidence 9999999888899999988876532100 00000000000000 000 0 00000000000000
Q ss_pred hccC-------CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc--CCcEEEEeCCCCCCcCcC-ChhhHHHH
Q 024042 195 VSKN-------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG--KKARLEIIENTSHVPQIE-NPGLFNSI 264 (273)
Q Consensus 195 ~~~~-------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~-~~~~~~~~ 264 (273)
.... ....+.....++..|+|+++|..|..++...+..+++.+. ...++++-| .+|..... ...++.+.
T Consensus 289 ~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~al~~~~~~~Lilgp-w~H~~~~~~~~~d~~~~ 367 (405)
T d1lnsa3 289 DRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHR-GAHIYMNSWQSIDFSET 367 (405)
T ss_dssp CTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEES-CSSCCCTTBSSCCHHHH
T ss_pred hhccccchhhhhhcChhhhhhcCCCCEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEeC-CCCCCCcccccchHHHH
Confidence 0000 0113334566778899999999999999888888888873 235666656 79975432 22345566
Q ss_pred HHHHhcc
Q 024042 265 VKNFLRG 271 (273)
Q Consensus 265 i~~fl~~ 271 (273)
+.+|++.
T Consensus 368 ~~~wFD~ 374 (405)
T d1lnsa3 368 INAYFVA 374 (405)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666654
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.58 E-value=5.4e-13 Score=99.19 Aligned_cols=123 Identities=15% Similarity=0.141 Sum_probs=83.5
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHH---HHHhhcCC-CeEEeecCCCCCCCCCCCc--------
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRK---QVQFFAPH-FNVYVPDLIFFGHSTTRSI-------- 100 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~---~~~~l~~~-~~v~~~d~~g~g~s~~~~~-------- 100 (273)
.|.++.++.+. +.+..|+|+++||.+++. ...|.. +.+.+.+. +.++.++..+.+.......
T Consensus 19 ~~r~~~~~v~~-----p~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 93 (288)
T d1sfra_ 19 MGRDIKVQFQS-----GGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGC 93 (288)
T ss_dssp TTEEEEEEEEC-----CSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEE
T ss_pred CCcEEEEEEeC-----CCCCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCccccCcccccccc
Confidence 56677776652 256889999999977543 123322 34556555 8899998776543332111
Q ss_pred --cccHHHHHHHHHHHHHH-h--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc
Q 024042 101 --QRTELFQAASLGKLLEK-I--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG 161 (273)
Q Consensus 101 --~~~~~~~~~~~~~~~~~-~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~ 161 (273)
.......++++...++. + +.+++.+.|+|+||..|+.++.++|+++.+++.+++.......
T Consensus 94 ~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~~~~ 159 (288)
T d1sfra_ 94 QTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQA 159 (288)
T ss_dssp ECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTST
T ss_pred cchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCccccccc
Confidence 11233345666555544 3 3467999999999999999999999999999999987765443
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.54 E-value=2.3e-12 Score=94.51 Aligned_cols=128 Identities=15% Similarity=0.132 Sum_probs=84.5
Q ss_pred CceeEEecC-CcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHH---HHHhhcCC-CeEEeecCCCC-CCCC-
Q 024042 25 LSSQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRK---QVQFFAPH-FNVYVPDLIFF-GHST- 96 (273)
Q Consensus 25 ~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~---~~~~l~~~-~~v~~~d~~g~-g~s~- 96 (273)
++..++..+ .|..+.+.... +..|+|+++||.++.. ...|.. +.+..... +.|+.+|--.. ..+.
T Consensus 4 ~e~~~v~s~~~~r~~~~~v~~-------~~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~ 76 (267)
T d1r88a_ 4 YENLMVPSPSMGRDIPVAFLA-------GGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNW 76 (267)
T ss_dssp CEEEEEEETTTTEEEEEEEEC-------CSSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBC
T ss_pred eEEEEEecccCCceeeEEEEC-------CCCCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCCCcCCccc
Confidence 455556554 56677777763 3458999999975432 135544 34445555 88888874211 1111
Q ss_pred CCCccccH-HHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC
Q 024042 97 TRSIQRTE-LFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK 159 (273)
Q Consensus 97 ~~~~~~~~-~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~ 159 (273)
........ ....+++...++.. +.+++.+.|+||||..|+.++.++|+++++++.+++.....
T Consensus 77 ~~~~~~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~~ 143 (267)
T d1r88a_ 77 EQDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPS 143 (267)
T ss_dssp SSCTTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTT
T ss_pred cccccccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCCC
Confidence 11112223 34566677777653 44789999999999999999999999999999999877654
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.53 E-value=2.5e-13 Score=105.08 Aligned_cols=128 Identities=12% Similarity=0.017 Sum_probs=85.7
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-----------hHhHHHHHHhhcCC-CeEEeecCCCCCCC
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-----------IWQWRKQVQFFAPH-FNVYVPDLIFFGHS 95 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-----------~~~~~~~~~~l~~~-~~v~~~d~~g~g~s 95 (273)
..|+..||++|+...+.|+ ..++.|+||+.|+++... ..........|.++ |.|+.+|.||+|.|
T Consensus 31 v~ipmrDG~~L~~~v~~P~---~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S 107 (385)
T d2b9va2 31 VMVPMRDGVKLYTVIVIPK---NARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGS 107 (385)
T ss_dssp EEEECTTSCEEEEEEEEET---TCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTC
T ss_pred EEEECCCCCEEEEEEEEcC---CCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCC
Confidence 3466679999998887643 345678888888765221 01122233455555 99999999999999
Q ss_pred CCCCcccc---------HHHHHHHHHHHHHHh----CC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 96 TTRSIQRT---------ELFQAASLGKLLEKI----GV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 96 ~~~~~~~~---------~~~~~~~~~~~~~~~----~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
.+...... ....++|..+.++.+ .. .+|.++|+|+||.+++.+|...+..+++++...+..+.
T Consensus 108 ~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d~ 185 (385)
T d2b9va2 108 QGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 185 (385)
T ss_dssp CSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred CCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEecccccc
Confidence 86432110 001133333333332 22 68999999999999999999988889999988876554
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.49 E-value=7.3e-12 Score=92.50 Aligned_cols=120 Identities=15% Similarity=0.109 Sum_probs=80.2
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHH---HHHhhcCC-CeEEeecCCCCCCCC---------CCC
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRK---QVQFFAPH-FNVYVPDLIFFGHST---------TRS 99 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~---~~~~l~~~-~~v~~~d~~g~g~s~---------~~~ 99 (273)
-|..+.....+ ++.|+|+++||.++.. ...|.. +.+.+.+. +.|+.+|-...+... ...
T Consensus 16 ~~r~i~~~~~~-------~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~ 88 (280)
T d1dqza_ 16 MGRDIKVQFQG-------GGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQN 88 (280)
T ss_dssp TTEEEEEEEEC-------CSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCC
T ss_pred CCCcceEEeeC-------CCCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCCcCccccCCcccccCC
Confidence 56667666543 4668999999976422 145543 33455555 899999843211110 001
Q ss_pred cccc-HHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC
Q 024042 100 IQRT-ELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR 160 (273)
Q Consensus 100 ~~~~-~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~ 160 (273)
.... ....++++...+++. +.+++.+.|+||||..|+.+|.++|+++.+++.+++......
T Consensus 89 ~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~~~ 153 (280)
T d1dqza_ 89 YTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSE 153 (280)
T ss_dssp SCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTS
T ss_pred cchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCccc
Confidence 1122 333567777777654 446799999999999999999999999999999998776543
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.45 E-value=1e-12 Score=95.36 Aligned_cols=193 Identities=17% Similarity=0.133 Sum_probs=105.8
Q ss_pred EEecC-CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchh-HhHHHHHHhhcCC----CeEEeecCCCCCC-C-CCCCc
Q 024042 29 TIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI-WQWRKQVQFFAPH----FNVYVPDLIFFGH-S-TTRSI 100 (273)
Q Consensus 29 ~~~~~-~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~-~~~~~~~~~l~~~----~~v~~~d~~g~g~-s-~~~~~ 100 (273)
.+..+ .|.+..++.+.|+... +.+.|+||++||.+.... ..+..+.....++ +.++.++....+. . .....
T Consensus 19 ~~~S~~lg~~~~~~v~~P~~~~-~~~~Pvvv~lhG~~~~~~~~~~~~l~~l~~~~~~~~~i~v~~~~~~~~~~~~~~~~~ 97 (246)
T d3c8da2 19 IWKSERLKNSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCN 97 (246)
T ss_dssp EEEETTTTEEEEEEEEEC------CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSC
T ss_pred EEECCCCCCEEEEEEEECCCCC-CCCCCEEEEeCCcchhccCcHHHHHHHHHHhCCCCceEEeecccccccccccccCcc
Confidence 34443 3666777776544322 346799999999432210 1222223333333 2333333221000 0 00011
Q ss_pred cccHHHHHHHHHHHHHHh-----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhh
Q 024042 101 QRTELFQAASLGKLLEKI-----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERI 175 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (273)
........+++..+++.. +.+++.++|+|+||..|+.++.++|+++++++.+++.........
T Consensus 98 ~~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~~~~~~------------ 165 (246)
T d3c8da2 98 ADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGG------------ 165 (246)
T ss_dssp HHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTTS------------
T ss_pred HHHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccccccCCc------------
Confidence 112233345555555553 236799999999999999999999999999999998765432110
Q ss_pred hhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCC
Q 024042 176 DHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHV 252 (273)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~ 252 (273)
............. .......|+++.+|+.|..+ ....+.+++++ +-..++.+++| ||.
T Consensus 166 ------~~~~~~~~~~~~~-----------~~~~~~~~~~l~~G~~D~~~-~~~~~~l~~~L~~~g~~~~~~~~~G-gH~ 226 (246)
T d3c8da2 166 ------QQEGVLLEKLKAG-----------EVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG-GHD 226 (246)
T ss_dssp ------SSCCHHHHHHHTT-----------SSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC-CSC
T ss_pred ------cchHHHHHHhhhh-----------hhhccCCCeEEEecCCCcch-hHHHHHHHHHHHHCCCCEEEEEeCC-CCC
Confidence 0000000000000 01111227999999999866 46777888877 45688889985 896
Q ss_pred c
Q 024042 253 P 253 (273)
Q Consensus 253 ~ 253 (273)
.
T Consensus 227 ~ 227 (246)
T d3c8da2 227 A 227 (246)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.40 E-value=4.8e-11 Score=87.70 Aligned_cols=130 Identities=12% Similarity=-0.042 Sum_probs=78.3
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH------HH----HHHhhc-CCCeEEeecCCCCC
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW------RK----QVQFFA-PHFNVYVPDLIFFG 93 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~------~~----~~~~l~-~~~~v~~~d~~g~g 93 (273)
++..+++..+|. ..++.+-|++-.++++-|+|+++||.+++....| .. +..... ..+.|+.++..+.+
T Consensus 27 v~~~~~~~~~~~-r~~~vylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 105 (273)
T d1wb4a1 27 IVKETYTGINGT-KSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGN 105 (273)
T ss_dssp EEEEEEEETTEE-EEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTT
T ss_pred EEEEEEecCCCe-EEEEEEeCCCCCCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCC
Confidence 455566665664 3566665544334556799999999876541111 11 122222 23777777776543
Q ss_pred CCCCCCccccHHHHHHHHHHHHH---------------HhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 94 HSTTRSIQRTELFQAASLGKLLE---------------KIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 94 ~s~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
..... ........+....+ ..+.+++.+.|+|+||..|+.+|.++|+++.+++.+++....
T Consensus 106 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~~~ 181 (273)
T d1wb4a1 106 CTAQN----FYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWY 181 (273)
T ss_dssp CCTTT----HHHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCCB
T ss_pred Ccccc----chhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCccccc
Confidence 22211 11111222211111 124478999999999999999999999999999999987654
Q ss_pred C
Q 024042 159 K 159 (273)
Q Consensus 159 ~ 159 (273)
.
T Consensus 182 ~ 182 (273)
T d1wb4a1 182 G 182 (273)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=6.5e-11 Score=93.38 Aligned_cols=128 Identities=14% Similarity=0.112 Sum_probs=87.7
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHh------------------hcCCCeEEeecC
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQF------------------FAPHFNVYVPDL 89 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~------------------l~~~~~v~~~d~ 89 (273)
-++++.++..|.||...++.. ....|++|++-|.++++ ..+..+.+. +.+..+++.+|.
T Consensus 24 Gyl~~~~~~~lffw~~~s~~~--~~~~Pl~~wlnGGPG~S-S~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDq 100 (452)
T d1ivya_ 24 GYLKSSGSKHLHYWFVESQKD--PENSPVVLWLNGGPGCS-SLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLES 100 (452)
T ss_dssp EEEECSTTEEEEEEEECCSSC--GGGSCEEEEECCTTTBC-THHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECC
T ss_pred eeeecCCCceEEEEEEEcCCC--CCCCCEEEEECCCCcHH-HHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEec
Confidence 357787888899999864432 34679999999999988 666544321 122368999998
Q ss_pred C-CCCCCCCCCcc--ccHHHHHHHHHHHH----HHh---CCccEEEEEeccchHHHHHHHHhC----CcccceEEEecCC
Q 024042 90 I-FFGHSTTRSIQ--RTELFQAASLGKLL----EKI---GVERFSVVGTSYGGFVAYHMARMW----PERVEKVVIASSG 155 (273)
Q Consensus 90 ~-g~g~s~~~~~~--~~~~~~~~~~~~~~----~~~---~~~~i~l~G~S~Gg~~a~~~a~~~----~~~v~~~v~~~~~ 155 (273)
| |.|.|...... .+..+.+.++.+++ +.. ..++++|.|-|+||..+-.+|... .-.++++++.++.
T Consensus 101 PvGtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~ 180 (452)
T d1ivya_ 101 PAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp STTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCc
Confidence 6 99998644332 24444555544444 333 336899999999999877777542 2358999999987
Q ss_pred CCC
Q 024042 156 VNM 158 (273)
Q Consensus 156 ~~~ 158 (273)
.+.
T Consensus 181 ~d~ 183 (452)
T d1ivya_ 181 SSY 183 (452)
T ss_dssp SBH
T ss_pred cCc
Confidence 764
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.38 E-value=3.9e-12 Score=93.29 Aligned_cols=206 Identities=15% Similarity=0.098 Sum_probs=111.6
Q ss_pred CceeEEecCCc-ceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhh-cCC-CeEEeecCCCCCCCCCC---
Q 024042 25 LSSQTIDIDDE-TTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFF-APH-FNVYVPDLIFFGHSTTR--- 98 (273)
Q Consensus 25 ~~~~~~~~~~g-~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l-~~~-~~v~~~d~~g~g~s~~~--- 98 (273)
++...+...+| .++.++.+.|++..+.++-|+|+++||..... .....+...+ ... +.|+++++++...-...
T Consensus 13 ~~~~~~~s~dg~~~~~~~v~~P~~~~~~~~yPvi~~lhG~~~~~-~~~~~~~~~~~~~~~~~vV~v~~~~~~~~~~~~r~ 91 (265)
T d2gzsa1 13 FSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMD-RLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRA 91 (265)
T ss_dssp EEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHH-HCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHH
T ss_pred eEEEEEEcCCCCEEEEEEEEcCCCCCCCCCceEEEEecCcchhh-hHHHHHHHHHHhcCCCeEEEecCCCCCcCcccccc
Confidence 56667777777 46778877655544456668999999943222 1112222233 333 88888888764321100
Q ss_pred --------------------CccccHHHH----HHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEE
Q 024042 99 --------------------SIQRTELFQ----AASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVI 151 (273)
Q Consensus 99 --------------------~~~~~~~~~----~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~ 151 (273)
......... ..++...++.. +..++.++|+|+||..++.++.+ ++.+.+++.
T Consensus 92 ~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a 170 (265)
T d2gzsa1 92 YDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYS 170 (265)
T ss_dssp HHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEE
T ss_pred cccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHc-CcccCEEEE
Confidence 000011122 22222223221 23568999999999999987776 456788887
Q ss_pred ecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCC--------CC
Q 024042 152 ASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQ--------DQ 223 (273)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~--------D~ 223 (273)
.+|...... ... ........ .......|+++.+|+. |.
T Consensus 171 ~s~~~~~~~---~~~--------------------~~~~~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~d~ 216 (265)
T d2gzsa1 171 ASPSLGRGY---DAL--------------------LSRVTAVE-----------PLQFCTKHLAIMEGSATQGDNRETHA 216 (265)
T ss_dssp ESGGGSTTH---HHH--------------------HHHHHTSC-----------TTTTTTCEEEEEECCC----------
T ss_pred ECCcccccc---hhh--------------------hhcccccc-----------ccccCCCcEEEEcCCccccccccccc
Confidence 776443210 000 00000000 0011112677777766 55
Q ss_pred CCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhhHHHHHHHH
Q 024042 224 IFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGLFNSIVKNF 268 (273)
Q Consensus 224 ~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 268 (273)
.++.+..+.+.+.+ +.+.++.++||++|.... +..+.+.|.+.
T Consensus 217 ~~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~~~--~~s~~~~l~~l 262 (265)
T d2gzsa1 217 VGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMF--NASFRQALLDI 262 (265)
T ss_dssp -CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHHH--HHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHCCCCEEEEEcCCCCcchHH--HHHHHHHHHHH
Confidence 66677777777766 467899999999996321 44455555443
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.37 E-value=7.3e-12 Score=90.66 Aligned_cols=103 Identities=15% Similarity=0.131 Sum_probs=70.0
Q ss_pred CeEEEEcCCCCch--hHhHHHHHHhhcC---CCeEEeecCCCCCCCCCCCc-cccHHHHHHHHHHHHHHh--CCccEEEE
Q 024042 55 PSLVLIHGFGPEA--IWQWRKQVQFFAP---HFNVYVPDLIFFGHSTTRSI-QRTELFQAASLGKLLEKI--GVERFSVV 126 (273)
Q Consensus 55 ~~vi~~hG~~~~~--~~~~~~~~~~l~~---~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~--~~~~i~l~ 126 (273)
.+||++||++++. ...+..+...+.+ ++.|+++++.....+..... .....+.++.+.+.++.. ..+++.+|
T Consensus 6 ~PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~~~~~~v~lV 85 (279)
T d1ei9a_ 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGYNAM 85 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTCEEEE
T ss_pred CcEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhccccccceeEE
Confidence 3799999998653 1356666666643 57899998753222111100 124556666666666543 23689999
Q ss_pred EeccchHHHHHHHHhCCc-ccceEEEecCCCC
Q 024042 127 GTSYGGFVAYHMARMWPE-RVEKVVIASSGVN 157 (273)
Q Consensus 127 G~S~Gg~~a~~~a~~~~~-~v~~~v~~~~~~~ 157 (273)
|||+||.++-.++.+.++ +|..+|.++++-.
T Consensus 86 GhSqGGLiaR~~i~~~~~~~V~~lITLgsPH~ 117 (279)
T d1ei9a_ 86 GFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQ 117 (279)
T ss_dssp EETTHHHHHHHHHHHCCSSCEEEEEEESCCTT
T ss_pred EEccccHHHHHHHHHcCCCCcceEEEECCCCC
Confidence 999999999999999875 5899999987644
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.33 E-value=5.7e-11 Score=87.82 Aligned_cols=125 Identities=14% Similarity=0.087 Sum_probs=74.9
Q ss_pred CcceEEeecCCccCC-----CCCCCCCeEEEEcCCCCchhHhHHHHH---HhhcC-CCeEEeecCCC-------------
Q 024042 34 DETTLHFWGPKLEDD-----HKTLKKPSLVLIHGFGPEAIWQWRKQV---QFFAP-HFNVYVPDLIF------------- 91 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~-----~~~~~~~~vi~~hG~~~~~~~~~~~~~---~~l~~-~~~v~~~d~~g------------- 91 (273)
-|.+..+..+-|+.- +.+++-|+|.++||.+++. ..|.... +...+ +..|+.++...
T Consensus 24 l~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~~~~-~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~ 102 (299)
T d1pv1a_ 24 TKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTP-DNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSW 102 (299)
T ss_dssp SSSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTTCCH-HHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCS
T ss_pred cCCceEEEEEeCCcccccCcccCCCCCEEEEcCCCCCCH-HHHHHhhhHHHHHHHcCCceecCCCcccccccCCcccccc
Confidence 355555555544321 1234579999999999887 7774321 22222 26666665321
Q ss_pred ---CCCCCCCCc-------c-ccHHHHHHHHHHHHHHh-CC---------ccEEEEEeccchHHHHHHHHh--CCcccce
Q 024042 92 ---FGHSTTRSI-------Q-RTELFQAASLGKLLEKI-GV---------ERFSVVGTSYGGFVAYHMARM--WPERVEK 148 (273)
Q Consensus 92 ---~g~s~~~~~-------~-~~~~~~~~~~~~~~~~~-~~---------~~i~l~G~S~Gg~~a~~~a~~--~~~~v~~ 148 (273)
.+.+..... . ...+...+++..+++.. .. ++..|.|+||||.-|+.+|.+ +|++..+
T Consensus 103 ~~g~~~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~ 182 (299)
T d1pv1a_ 103 DFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKS 182 (299)
T ss_dssp SSSSSCCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSE
T ss_pred cccCCCccccccccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEE
Confidence 111111111 0 11233456666666543 21 468999999999999999976 4888888
Q ss_pred EEEecCCCCCC
Q 024042 149 VVIASSGVNMK 159 (273)
Q Consensus 149 ~v~~~~~~~~~ 159 (273)
+...++.....
T Consensus 183 ~~s~s~~~~~~ 193 (299)
T d1pv1a_ 183 CSAFAPIVNPS 193 (299)
T ss_dssp EEEESCCCCST
T ss_pred EeeccCcCCcc
Confidence 88888766544
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.32 E-value=1.6e-12 Score=96.15 Aligned_cols=109 Identities=16% Similarity=0.189 Sum_probs=74.3
Q ss_pred CCCCCeEEEEcCCCCchhHhH-HHHH-HhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH----h--CCc
Q 024042 51 TLKKPSLVLIHGFGPEAIWQW-RKQV-QFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK----I--GVE 121 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~-~~~~-~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~----~--~~~ 121 (273)
+..+|++|++|||.++....| ..+. ..|..+ ++|+++|+...................+.+..+++. . ..+
T Consensus 67 ~~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~ 146 (338)
T d1bu8a2 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPE 146 (338)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcccchHHHHHhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 467899999999987663333 3333 355555 999999997432111111112333334444444443 2 348
Q ss_pred cEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC
Q 024042 122 RFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK 159 (273)
Q Consensus 122 ~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~ 159 (273)
+++|||||+||++|-.++...+.++..++.++|+.+..
T Consensus 147 ~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~F 184 (338)
T d1bu8a2 147 NVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPCF 184 (338)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTTT
T ss_pred eeEEEeccHHHHHHHHHHHhhccccccccccccCcCcc
Confidence 99999999999999999998888899999999987654
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.30 E-value=2.1e-12 Score=95.75 Aligned_cols=108 Identities=15% Similarity=0.158 Sum_probs=70.5
Q ss_pred CCCCCeEEEEcCCCCchhHhH-HHHH-HhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHH----HhC--Cc
Q 024042 51 TLKKPSLVLIHGFGPEAIWQW-RKQV-QFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLE----KIG--VE 121 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~-~~~~-~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~----~~~--~~ 121 (273)
+.++|++|++|||.++....| ..+. ..|..+ ++|+++|+...................+.+..+++ ..+ .+
T Consensus 67 ~~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~ 146 (337)
T d1rp1a2 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPS 146 (337)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccccCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 457899999999987663334 3344 345555 99999999743211101111122333344444443 334 48
Q ss_pred cEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC
Q 024042 122 RFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK 159 (273)
Q Consensus 122 ~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~ 159 (273)
+++|||||+||++|-.++.+. .++..++.++|+.+..
T Consensus 147 ~vhlIGhSLGAhvAG~aG~~~-~~l~rItgLDPA~P~F 183 (337)
T d1rp1a2 147 QVQLIGHSLGAHVAGEAGSRT-PGLGRITGLDPVEASF 183 (337)
T ss_dssp GEEEEEETHHHHHHHHHHHTS-TTCCEEEEESCCCTTT
T ss_pred heEEEeecHHHhhhHHHHHhh-ccccceeccCCCcccc
Confidence 999999999999998777665 5799999999977654
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.30 E-value=1.8e-10 Score=89.79 Aligned_cols=127 Identities=18% Similarity=0.226 Sum_probs=85.7
Q ss_pred EEecCC-cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHh-----------------hcCCCeEEeecCC
Q 024042 29 TIDIDD-ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQF-----------------FAPHFNVYVPDLI 90 (273)
Q Consensus 29 ~~~~~~-g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~-----------------l~~~~~v~~~d~~ 90 (273)
++.+.+ +..++||...++.. ..+.|.||++-|.++++ ..+..+.+. ..+..+++.+|.|
T Consensus 20 yl~v~~~~~~lfyw~~~s~~~--~~~~Pl~~WlnGGPG~S-S~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~P 96 (421)
T d1wpxa1 20 YLDVEDEDKHFFFWTFESRND--PAKDPVILWLNGGPGCS-SLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQP 96 (421)
T ss_dssp EEECTTSCCEEEEEEECCSSC--TTTSCEEEEECCTTTBC-THHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCS
T ss_pred eeecCCCCceEEEEEEEeCCC--CCCCCEEEEECCCCcHH-HHHHHHHhcCCcEECCCCccccCCcccccccCEEEEecC
Confidence 677753 56799988764332 35679999999999988 666555421 1223689999965
Q ss_pred -CCCCCCCCC-ccccHHHHHHHHHHHHHHh---------CCccEEEEEeccchHHHHHHHHhC------CcccceEEEec
Q 024042 91 -FFGHSTTRS-IQRTELFQAASLGKLLEKI---------GVERFSVVGTSYGGFVAYHMARMW------PERVEKVVIAS 153 (273)
Q Consensus 91 -g~g~s~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~i~l~G~S~Gg~~a~~~a~~~------~~~v~~~v~~~ 153 (273)
|.|.|.... ...+....++++.++++.+ ...++.|.|-|+||..+-.+|.+. +-.++++++.+
T Consensus 97 vGtGfSy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGn 176 (421)
T d1wpxa1 97 VNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGN 176 (421)
T ss_dssp TTSTTCBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEES
T ss_pred CCCCceecCCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecC
Confidence 999885332 3345555566665555432 235899999999999877776542 22478999988
Q ss_pred CCCCC
Q 024042 154 SGVNM 158 (273)
Q Consensus 154 ~~~~~ 158 (273)
+..+.
T Consensus 177 g~~dp 181 (421)
T d1wpxa1 177 GLTDP 181 (421)
T ss_dssp CCCCH
T ss_pred Ccccc
Confidence 87653
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=99.21 E-value=7.4e-10 Score=87.68 Aligned_cols=122 Identities=14% Similarity=0.137 Sum_probs=78.9
Q ss_pred ceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHh-----------------hcCCCeEEeecCC-CCCCCCC
Q 024042 36 TTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQF-----------------FAPHFNVYVPDLI-FFGHSTT 97 (273)
Q Consensus 36 ~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~-----------------l~~~~~v~~~d~~-g~g~s~~ 97 (273)
..+.||...+...+...+.|++|++-|.++++ ..+..+.+. ..+..+++.+|.| |.|.|..
T Consensus 49 ~~~ffw~fe~~~~~~~~~~Pl~lWlnGGPGcS-S~~g~f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~ 127 (483)
T d1ac5a_ 49 LEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCS-SMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVE 127 (483)
T ss_dssp CEEEEEEEECSCSGGGSSCCEEEEECCTTTBC-THHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSS
T ss_pred ceEEEEEEEecCCCCCCCCCEEEEECCCCcHH-HHHHHHHccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeec
Confidence 45777766533333334569999999999988 665444320 1123689999976 8888854
Q ss_pred CCc----------cccHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHHhC------------Ccccce
Q 024042 98 RSI----------QRTELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMARMW------------PERVEK 148 (273)
Q Consensus 98 ~~~----------~~~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~~~------------~~~v~~ 148 (273)
... ..+.++.++++..+++.. ..+++.|.|-|+||..+-.+|... .-.+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkG 207 (483)
T d1ac5a_ 128 QNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKA 207 (483)
T ss_dssp CCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEE
T ss_pred CCCCccccccccccCCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCccccee
Confidence 321 124455566665555542 337899999999998777766542 124888
Q ss_pred EEEecCCCCC
Q 024042 149 VVIASSGVNM 158 (273)
Q Consensus 149 ~v~~~~~~~~ 158 (273)
+.+.++..+.
T Consensus 208 i~IGNg~~d~ 217 (483)
T d1ac5a_ 208 LLIGNGWIDP 217 (483)
T ss_dssp EEEEEECCCH
T ss_pred eeecCCccCh
Confidence 8888876543
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=99.17 E-value=8.5e-11 Score=87.17 Aligned_cols=124 Identities=16% Similarity=0.110 Sum_probs=72.9
Q ss_pred CccEEEEEeccchHHHHHHHHhCCcccce-EEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccC
Q 024042 120 VERFSVVGTSYGGFVAYHMARMWPERVEK-VVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKN 198 (273)
Q Consensus 120 ~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (273)
.++|.+.|+|+||++|+.++..+|+.+++ +.++++....... ... ....... ...... ............
T Consensus 10 p~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg~p~~ca~-~~~-----~~~~~~~-~~~~~~--~~~~~~~~~~~~ 80 (318)
T d2d81a1 10 PNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCAR-NQY-----YTSCMYN-GYPSIT--TPTANMKSWSGN 80 (318)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTS-SSC-----GGGGSTT-CCCCCH--HHHHHHHHHBTT
T ss_pred ccceEEEEECHHHHHHHHHHHhcccceeeeEEEeccCchhhhc-ccc-----hHHHhhc-CCCCCc--ChhHHHHHHhhc
Confidence 47899999999999999999999999874 4444433221110 000 0000000 011111 111111111111
Q ss_pred CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-----CCcEEEEeCCCCCCcCc
Q 024042 199 LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-----KKARLEIIENTSHVPQI 255 (273)
Q Consensus 199 ~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~ 255 (273)
...........|+++++|++|..||++.++.+.+.+. .+++++..+++||.+..
T Consensus 81 ---~i~~~~~~~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT 139 (318)
T d2d81a1 81 ---QIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPT 139 (318)
T ss_dssp ---TBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEE
T ss_pred ---CCcchhccCCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCC
Confidence 1112222334599999999999999999999998872 24677888999997643
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.68 E-value=1.8e-08 Score=76.17 Aligned_cols=100 Identities=18% Similarity=0.203 Sum_probs=70.5
Q ss_pred CCCCCeEEEEcCCCCch------hHhHHH----HHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh-
Q 024042 51 TLKKPSLVLIHGFGPEA------IWQWRK----QVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI- 118 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~------~~~~~~----~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~- 118 (273)
...+-+|||+||+.+.. ...|.. +.+.|.+. +.|++.... +..+.++.++.+...++..
T Consensus 4 ~~~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~---------p~~S~~~RA~eL~~~I~~~~ 74 (388)
T d1ku0a_ 4 RANDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVG---------PLSSNWDRACEAYAQLVGGT 74 (388)
T ss_dssp CCCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCC---------SSBCHHHHHHHHHHHHHCEE
T ss_pred CCCCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccC---------CccCHHHHHHHHHHHHhhhh
Confidence 34567899999975432 123443 55667666 999999865 2346777788888877642
Q ss_pred ---C-------------------------CccEEEEEeccchHHHHHHHHhCCc-------------------------c
Q 024042 119 ---G-------------------------VERFSVVGTSYGGFVAYHMARMWPE-------------------------R 145 (273)
Q Consensus 119 ---~-------------------------~~~i~l~G~S~Gg~~a~~~a~~~~~-------------------------~ 145 (273)
+ .+||+||||||||..+-.++...++ .
T Consensus 75 ~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 154 (388)
T d1ku0a_ 75 VDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRF 154 (388)
T ss_dssp EECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCC
T ss_pred hhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcc
Confidence 1 1489999999999999888865432 5
Q ss_pred cceEEEecCCCCCC
Q 024042 146 VEKVVIASSGVNMK 159 (273)
Q Consensus 146 v~~~v~~~~~~~~~ 159 (273)
|+.+..++++-.-.
T Consensus 155 V~SvTTIsTPH~GS 168 (388)
T d1ku0a_ 155 VLSVTTIATPHDGT 168 (388)
T ss_dssp EEEEEEESCCTTCC
T ss_pred eEEEEeccCCCCCc
Confidence 89999998765543
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=98.47 E-value=4.9e-07 Score=72.40 Aligned_cols=123 Identities=15% Similarity=0.119 Sum_probs=74.8
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---C-chhHhHHHHHHhhcCCCeEEeecCC----CCCCCC---CCCc
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---P-EAIWQWRKQVQFFAPHFNVYVPDLI----FFGHST---TRSI 100 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~-~~~~~~~~~~~~l~~~~~v~~~d~~----g~g~s~---~~~~ 100 (273)
.+|-..|..|... ...++.|++|++||.+ + .....+....-...+...|+.++|| |+-... ....
T Consensus 88 sEDCL~LnI~~P~----~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~g 163 (532)
T d1ea5a_ 88 SEDCLYLNIWVPS----PRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPG 163 (532)
T ss_dssp CSCCCEEEEEECS----SCCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCS
T ss_pred CccCCEEEEEeCC----CCCCCCcEEEEEEcCCcccccCCccccCcchhhcccCccEEEEeeccccccccccccccCCCC
Confidence 3477778887743 2345689999999964 1 1112222211122335999999999 332221 2233
Q ss_pred cccHHHHHHHH---HHHHHHhCC--ccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCCC
Q 024042 101 QRTELFQAASL---GKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVNM 158 (273)
Q Consensus 101 ~~~~~~~~~~~---~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~~ 158 (273)
...+.++...+ .+.|..+|. ++|.|+|+|.||..+..++... ...+.++|+.++....
T Consensus 164 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~~ 228 (532)
T d1ea5a_ 164 NVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPNC 228 (532)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTTC
T ss_pred cccchhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeecccccC
Confidence 44555555444 444445543 7899999999998777666532 2468889988766543
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=98.44 E-value=3.5e-07 Score=72.34 Aligned_cols=122 Identities=20% Similarity=0.178 Sum_probs=75.2
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCC---ch-hHhHHHHHHhhcC-CCeEEeecCC----CCCCCC----CC
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP---EA-IWQWRKQVQFFAP-HFNVYVPDLI----FFGHST----TR 98 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~---~~-~~~~~~~~~~l~~-~~~v~~~d~~----g~g~s~----~~ 98 (273)
.+|-..|..+... ...++.|++|++||.+. +. ...+. ....+.+ ...|+.++|| |+-... ..
T Consensus 78 sEDCL~lni~~P~----~~~~~lPV~v~ihGG~~~~g~~~~~~~~-~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~ 152 (483)
T d1qe3a_ 78 SEDCLYVNVFAPD----TPSQNLPVMVWIHGGAFYLGAGSEPLYD-GSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAY 152 (483)
T ss_dssp CSCCCEEEEEEEC----SSCCSEEEEEEECCSTTTSCCTTSGGGC-CHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTS
T ss_pred CCcCCEEEEEECC----CCCCCCceEEEEeecccccCCccccccc-cccccccCceEEEeecccccchhhcccccccccc
Confidence 3466667777653 33556899999999642 22 11221 1222333 4999999999 442111 12
Q ss_pred CccccHHHHHH---HHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCCC
Q 024042 99 SIQRTELFQAA---SLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVNM 158 (273)
Q Consensus 99 ~~~~~~~~~~~---~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~~ 158 (273)
+..+.+.++.. ++.+.|+.+|. ++|.|+|+|.||..+..++... ...+.++|+.++....
T Consensus 153 ~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~~ 219 (483)
T d1qe3a_ 153 SDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRT 219 (483)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCC
T ss_pred ccccccHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCccc
Confidence 23455555544 44444455544 7899999999999887776542 2468999998876543
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.41 E-value=1.7e-06 Score=69.04 Aligned_cols=123 Identities=15% Similarity=0.095 Sum_probs=73.9
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCC---ch-hHhHHHHHHhhcCCCeEEeecCC----CCCCC---CCCCc
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP---EA-IWQWRKQVQFFAPHFNVYVPDLI----FFGHS---TTRSI 100 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~---~~-~~~~~~~~~~l~~~~~v~~~d~~----g~g~s---~~~~~ 100 (273)
.+|-..|..|... ...++.|++|++||.+. +. ...+....-.......|+.+++| |+-.. .....
T Consensus 86 sEDCL~lnI~~P~----~~~~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~g 161 (526)
T d1p0ia_ 86 SEDCLYLNVWIPA----PKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPG 161 (526)
T ss_dssp CSCCCEEEEEEES----SCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCS
T ss_pred CCcCCEEEEEeCC----CCCCCCceEEEEECCCcccccCcccccCccccccccceeEEecccccccccccCCCCcccccc
Confidence 3467778887753 33456799999999652 22 11222211112234899999999 33221 12233
Q ss_pred cccHHHHHHH---HHHHHHHhCC--ccEEEEEeccchHHHHHHHHh--CCcccceEEEecCCCCC
Q 024042 101 QRTELFQAAS---LGKLLEKIGV--ERFSVVGTSYGGFVAYHMARM--WPERVEKVVIASSGVNM 158 (273)
Q Consensus 101 ~~~~~~~~~~---~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~--~~~~v~~~v~~~~~~~~ 158 (273)
.+.+.++... +.+.|+.+|. ++|.|+|+|.||..+..++.. ....+.++|+.++....
T Consensus 162 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~~ 226 (526)
T d1p0ia_ 162 NMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFNA 226 (526)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTTS
T ss_pred cccccchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhcccccccC
Confidence 4455555444 4444455544 789999999999987665543 23458888888766543
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.35 E-value=9.2e-07 Score=70.75 Aligned_cols=122 Identities=19% Similarity=0.132 Sum_probs=74.5
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCC---chhHhHHHHHHhhcCCCeEEeecCC----CCCCCC--CCCccc
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP---EAIWQWRKQVQFFAPHFNVYVPDLI----FFGHST--TRSIQR 102 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~---~~~~~~~~~~~~l~~~~~v~~~d~~----g~g~s~--~~~~~~ 102 (273)
.+|-..|..|... ....+.+.|++|++||.+. +. ..+....-...++..|+.++|| |+-... .....+
T Consensus 93 sEDCL~LnI~~P~--~~~~~~~lPV~v~ihGG~~~~gs~-~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~gN~ 169 (532)
T d2h7ca1 93 SEDCLYLNIYTPA--DLTKKNRLPVMVWIHGGGLMVGAA-STYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNW 169 (532)
T ss_dssp ESCCCEEEEEECS--CTTSCCCEEEEEEECCSTTTSCCS-TTSCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCH
T ss_pred CCcCCEEEEEECC--CCCCCCCcEEEEEEeCCccccccc-ccCCchhhhhcCceEEEEEeeccCCCcccccccccccccc
Confidence 4577888888752 2223455799999999642 22 2232111112334899999999 332222 122345
Q ss_pred cHHHHHHH---HHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCC
Q 024042 103 TELFQAAS---LGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGV 156 (273)
Q Consensus 103 ~~~~~~~~---~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~ 156 (273)
.+.++... +.+.|..+|. ++|.|+|+|.||..+..++... ...+.++|+.++..
T Consensus 170 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 170 GHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred ccHHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 55555444 4444445544 7899999999998877766542 34688899888654
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.30 E-value=2.4e-06 Score=68.49 Aligned_cols=122 Identities=16% Similarity=0.073 Sum_probs=73.7
Q ss_pred CCcceEEeecCCccCCCCCCCCCeEEEEcCCCC---ch-hHhHHHHHHhhcCCCeEEeecCC----CCCCCC---CCCcc
Q 024042 33 DDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP---EA-IWQWRKQVQFFAPHFNVYVPDLI----FFGHST---TRSIQ 101 (273)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~---~~-~~~~~~~~~~l~~~~~v~~~d~~----g~g~s~---~~~~~ 101 (273)
+|-..|..+... .....+.|++|++||.+. +. ...+....-...+...|+.++|| |+-.+. .....
T Consensus 94 EDCL~LnI~~P~---~~~~~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN 170 (542)
T d2ha2a1 94 EDCLYLNVWTPY---PRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 170 (542)
T ss_dssp SCCCEEEEEEES---SCCSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSC
T ss_pred CcCCEEEEEecC---CCCCCCCcEEEEEEECccccccCcccccCchhhhhhccceeEeeeeeccceeeecccccccCCCc
Confidence 466777777642 122456799999999642 22 12222221112235899999999 432221 12234
Q ss_pred ccHHHHHH---HHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCC
Q 024042 102 RTELFQAA---SLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVN 157 (273)
Q Consensus 102 ~~~~~~~~---~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~ 157 (273)
+.+.++.. ++.+.|..+|. ++|.|+|+|.||..+..++... ...+.++|+.++...
T Consensus 171 ~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~~ 233 (542)
T d2ha2a1 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPN 233 (542)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCSS
T ss_pred CCcccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeeccccC
Confidence 45555544 44444455544 7899999999998887766543 246888898887554
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=98.27 E-value=3e-06 Score=67.88 Aligned_cols=124 Identities=14% Similarity=0.089 Sum_probs=73.3
Q ss_pred ecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHhH--HHH-HHhh-cC-CCeEEeecCC----CCCCCCC--
Q 024042 31 DIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQW--RKQ-VQFF-AP-HFNVYVPDLI----FFGHSTT-- 97 (273)
Q Consensus 31 ~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~~--~~~-~~~l-~~-~~~v~~~d~~----g~g~s~~-- 97 (273)
..+|-..|..+... .....++.|++|++||.+-.. ...+ ..+ ...+ .. ...|++++|| |+-....
T Consensus 101 ~sEDCL~LnI~~P~--~~~~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~ 178 (544)
T d1thga_ 101 MNEDCLYLNVFRPA--GTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAIT 178 (544)
T ss_dssp BCSCCCEEEEEEET--TCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHH
T ss_pred CCCcCCEEEEEECC--CCCCCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhh
Confidence 34577788888642 223345679999999965221 0111 122 2223 23 3899999999 3322211
Q ss_pred --CCccccHHHHH---HHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC--------CcccceEEEecCCC
Q 024042 98 --RSIQRTELFQA---ASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW--------PERVEKVVIASSGV 156 (273)
Q Consensus 98 --~~~~~~~~~~~---~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~--------~~~v~~~v~~~~~~ 156 (273)
.+....+.++. +++.+.|..+|. ++|.|+|+|.||..+..++... ...+.++|+.++..
T Consensus 179 ~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 179 AEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred ccccccHHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 12234444444 444555555544 7899999999998776655431 23688999988653
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=98.19 E-value=4e-06 Score=66.69 Aligned_cols=124 Identities=15% Similarity=0.077 Sum_probs=72.2
Q ss_pred CCcceEEeecCCccCCCCCCCCCeEEEEcCCC---Cch-hHhHHHHHHhhcCCCeEEeecCC----CCCCCCC----CCc
Q 024042 33 DDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEA-IWQWRKQVQFFAPHFNVYVPDLI----FFGHSTT----RSI 100 (273)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~-~~~~~~~~~~l~~~~~v~~~d~~----g~g~s~~----~~~ 100 (273)
+|-..|..|... ....+.+.|++|++||.+ ++. ...+......-.+...|+.++|| |+-.+.. ...
T Consensus 78 EDCL~LnI~~P~--~~~~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~ 155 (517)
T d1ukca_ 78 EDCLFINVFKPS--TATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDL 155 (517)
T ss_dssp SCCCEEEEEEET--TCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCT
T ss_pred CcCCEEEEEeCC--CCCCCCCceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccceeecCcccccccccc
Confidence 466777777642 112344569999999954 222 11222333222333788999999 3322210 112
Q ss_pred cccHHHHHH---HHHHHHHHhCC--ccEEEEEeccchHHHHHHHHh----CCcccceEEEecCCCCC
Q 024042 101 QRTELFQAA---SLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARM----WPERVEKVVIASSGVNM 158 (273)
Q Consensus 101 ~~~~~~~~~---~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~----~~~~v~~~v~~~~~~~~ 158 (273)
.+.+.++.. ++.+-|..+|. ++|.|+|+|.||..+...+.. ....+.++|+.++....
T Consensus 156 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~~ 222 (517)
T d1ukca_ 156 NAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPT 222 (517)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCC
T ss_pred chhHHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeeccccccc
Confidence 344555444 44444455544 789999999999877654432 12368999998876543
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=98.15 E-value=1.4e-05 Score=63.85 Aligned_cols=123 Identities=13% Similarity=0.063 Sum_probs=72.6
Q ss_pred ecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCC---chhHhH--HHHH-H-hhcC-CCeEEeecCC----CCCCCC--
Q 024042 31 DIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP---EAIWQW--RKQV-Q-FFAP-HFNVYVPDLI----FFGHST-- 96 (273)
Q Consensus 31 ~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~---~~~~~~--~~~~-~-~l~~-~~~v~~~d~~----g~g~s~-- 96 (273)
..+|-..|..|... .....++.|++|++||.+. +. ..| ..+. . .+.. ...|+.+++| |+-...
T Consensus 93 ~sEDCL~LnI~~P~--~~~~~~~~PVlv~ihGG~f~~g~~-~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~ 169 (534)
T d1llfa_ 93 QSEDCLTINVVRPP--GTKAGANLPVMLWIFGGGFEIGSP-TIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDI 169 (534)
T ss_dssp BCSCCCEEEEEECT--TCCTTCCEEEEEEECCSTTTSCCG-GGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHH
T ss_pred CCCcCCEEEEEECC--CCCCCCCCeEEEEECCCccccCCC-CCCCchhccchhhhccCCeEEEEeecCCCcccccCCccc
Confidence 34577788888752 1123567899999999652 22 222 2222 2 2333 4999999999 332211
Q ss_pred --CCCccccHHHHH---HHHHHHHHHhCC--ccEEEEEeccchHHHHHHHH-hC-------CcccceEEEecCCC
Q 024042 97 --TRSIQRTELFQA---ASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMAR-MW-------PERVEKVVIASSGV 156 (273)
Q Consensus 97 --~~~~~~~~~~~~---~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~-~~-------~~~v~~~v~~~~~~ 156 (273)
..+....+.++. +++.+-|..+|. ++|.|+|+|.||..+..... .. ...+.++|+.++..
T Consensus 170 ~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 170 KAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred ccccccccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 112234444444 445555555544 78999999999986654443 21 12488899988754
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.12 E-value=8.5e-06 Score=65.72 Aligned_cols=122 Identities=14% Similarity=0.088 Sum_probs=71.6
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCC---chh-H------hHHHHHHhh--cCCCeEEeecCC----CCCCC
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP---EAI-W------QWRKQVQFF--APHFNVYVPDLI----FFGHS 95 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~---~~~-~------~~~~~~~~l--~~~~~v~~~d~~----g~g~s 95 (273)
.+|-..|..|..... .....+.|++|++||.+- +.. . .|. ...+ ..+..|+.++|| |+-..
T Consensus 77 sEDCL~LNI~~P~~~-~~~~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~d--g~~la~~~~vIvVt~nYRlg~~GFl~~ 153 (579)
T d2bcea_ 77 NEDCLYLNIWVPQGR-KEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYD--GEEIATRGNVIVVTFNYRVGPLGFLST 153 (579)
T ss_dssp CSCCCEEEEEEEECS-SSCCCSEEEEEECCCCSEEEC-------CTTGGGC--CHHHHHHHTCEEEEECCCCHHHHHCCC
T ss_pred CCcCCEEEEEECCCC-CCCCCCCcEEEEECCCcccCCCCCCcccCCccccc--hhhhhccCCEEEEeecccccccccccc
Confidence 457777777774210 112345799999999652 110 0 111 1112 224889999999 33221
Q ss_pred --CCCCccccHHHHHHHHH---HHHHHhCC--ccEEEEEeccchHHHHHHHHh--CCcccceEEEecCCC
Q 024042 96 --TTRSIQRTELFQAASLG---KLLEKIGV--ERFSVVGTSYGGFVAYHMARM--WPERVEKVVIASSGV 156 (273)
Q Consensus 96 --~~~~~~~~~~~~~~~~~---~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~--~~~~v~~~v~~~~~~ 156 (273)
...+..+.+.++...+. +.|..+|. ++|.|+|+|.||..+..++.. ....++++|+.++..
T Consensus 154 ~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 154 GDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp SSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred cccCCCccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 22233455566555444 44444543 789999999999887766543 235689999988654
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.84 E-value=1.4e-05 Score=64.30 Aligned_cols=106 Identities=21% Similarity=0.056 Sum_probs=62.4
Q ss_pred CCCCCeEEEEcCCCC---ch-hHhHHHHHHhhcC-CCeEEeecCC----CCCCC---------CCCCccccHHHHHHHHH
Q 024042 51 TLKKPSLVLIHGFGP---EA-IWQWRKQVQFFAP-HFNVYVPDLI----FFGHS---------TTRSIQRTELFQAASLG 112 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~---~~-~~~~~~~~~~l~~-~~~v~~~d~~----g~g~s---------~~~~~~~~~~~~~~~~~ 112 (273)
.++.|++|++||.+- +. ...|.. ....++ ...|++++|| |+-.. ........+.++...+.
T Consensus 136 ~~~lPV~V~ihGG~f~~Gs~~~~~~~~-~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~ 214 (571)
T d1dx4a_ 136 TNGLPILIWIYGGGFMTGSATLDIYNA-DIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 214 (571)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCC-HHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCCccCCCCcccccch-hhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHH
Confidence 456799999999642 22 122221 111223 3888899999 32211 11123445555554444
Q ss_pred HH---HHHhCC--ccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCC
Q 024042 113 KL---LEKIGV--ERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVN 157 (273)
Q Consensus 113 ~~---~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~ 157 (273)
.+ |..+|. ++|.|+|+|.||..+..++... ...+.++|+.++...
T Consensus 215 WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 215 WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence 44 444443 7899999999998887665542 245888888776554
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.83 E-value=0.00079 Score=47.98 Aligned_cols=31 Identities=19% Similarity=0.176 Sum_probs=23.5
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHHh
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
+.+.++.....++++.|||+||.+|..++..
T Consensus 122 i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 122 VLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 3344444455789999999999999988754
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.82 E-value=0.00082 Score=47.86 Aligned_cols=31 Identities=23% Similarity=0.167 Sum_probs=23.0
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHHh
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
+.++++.....++++.|||+||.+|..++..
T Consensus 123 v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 123 VQEQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 3333444445789999999999999888864
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.75 E-value=0.0012 Score=46.90 Aligned_cols=31 Identities=19% Similarity=0.109 Sum_probs=22.8
Q ss_pred HHHHHHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 112 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
..+++.....++++.|||+||.+|..++...
T Consensus 116 ~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~l 146 (261)
T d1uwca_ 116 KQQASQYPDYALTVTGHSLGASMAALTAAQL 146 (261)
T ss_dssp HHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHhhCCCcceEEeccchhHHHHHHHHHHH
Confidence 3333333446899999999999999887653
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.72 E-value=0.00084 Score=47.97 Aligned_cols=31 Identities=26% Similarity=0.187 Sum_probs=22.8
Q ss_pred HHHHHHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 112 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
..+++.....++++.|||+||.+|..++...
T Consensus 128 ~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~l 158 (271)
T d1tiaa_ 128 KEVVAQNPNYELVVVGHSLGAAVATLAATDL 158 (271)
T ss_pred HHHHHhCCCceEEEeccchHHHHHHHHHHHH
Confidence 3333333446899999999999999888653
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=96.71 E-value=0.0017 Score=46.30 Aligned_cols=32 Identities=19% Similarity=0.142 Sum_probs=23.8
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
+...++.....++++.|||+||.+|..++...
T Consensus 128 v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 128 VEDAVREHPDYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcceeeeccchHHHHHHHHHHHH
Confidence 33334444446899999999999999988754
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=96.35 E-value=0.043 Score=36.68 Aligned_cols=53 Identities=13% Similarity=-0.007 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCC----cccceEEEecCCCC
Q 024042 105 LFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWP----ERVEKVVIASSGVN 157 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~----~~v~~~v~~~~~~~ 157 (273)
......+.+..++-...+++|+|+|.|+.++..++...+ ++|.++++++-+..
T Consensus 80 ~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP~~ 136 (197)
T d1cexa_ 80 REMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYTKN 136 (197)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTTT
T ss_pred HHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCCCC
Confidence 344444555555545579999999999999998887653 57899999886443
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=93.81 E-value=0.053 Score=36.61 Aligned_cols=76 Identities=11% Similarity=-0.008 Sum_probs=43.8
Q ss_pred CeEEeecCCCCCCCCCC-Cccc--cHHHHHHHHHHHHH----HhCCccEEEEEeccchHHHHHHHHhC------------
Q 024042 82 FNVYVPDLIFFGHSTTR-SIQR--TELFQAASLGKLLE----KIGVERFSVVGTSYGGFVAYHMARMW------------ 142 (273)
Q Consensus 82 ~~v~~~d~~g~g~s~~~-~~~~--~~~~~~~~~~~~~~----~~~~~~i~l~G~S~Gg~~a~~~a~~~------------ 142 (273)
-.+..++||..-..... ...+ +..+=+.++...++ +-...+++|+|+|.|+.++..++...
T Consensus 36 ~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~ 115 (207)
T d1qoza_ 36 TTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAV 115 (207)
T ss_dssp EEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSC
T ss_pred CeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCccccccccCCC
Confidence 45677888754322111 1111 22222333444443 33457999999999999998887421
Q ss_pred ------CcccceEEEecCCCC
Q 024042 143 ------PERVEKVVIASSGVN 157 (273)
Q Consensus 143 ------~~~v~~~v~~~~~~~ 157 (273)
.++|.++++++-+..
T Consensus 116 ~l~~~~~~~V~avvl~GdP~~ 136 (207)
T d1qoza_ 116 PLTAGAVSAVKAAIFMGDPRN 136 (207)
T ss_dssp CSCHHHHHHEEEEEEESCTTC
T ss_pred CCChhhhhcEEEEEEEeCCCC
Confidence 135788888875443
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=93.67 E-value=0.079 Score=35.74 Aligned_cols=85 Identities=9% Similarity=0.014 Sum_probs=47.6
Q ss_pred HHHHHhhcCCCeEEeecCCCCCCCC-CCCccc--cHHHHHHHHHHHHHH----hCCccEEEEEeccchHHHHHHHHhC--
Q 024042 72 RKQVQFFAPHFNVYVPDLIFFGHST-TRSIQR--TELFQAASLGKLLEK----IGVERFSVVGTSYGGFVAYHMARMW-- 142 (273)
Q Consensus 72 ~~~~~~l~~~~~v~~~d~~g~g~s~-~~~~~~--~~~~~~~~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~a~~~-- 142 (273)
..+...+. ...+..++||...... .....+ +..+=+..+...++. -...+++|+|+|.|+.++..++...
T Consensus 27 ~~~~~~~~-~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~~~g~ 105 (207)
T d1g66a_ 27 NGVLSAYP-GSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGD 105 (207)
T ss_dssp HHHHHHST-TCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCB
T ss_pred HHHHHhcC-CCeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHHHHhccCC
Confidence 34444443 3567778888532211 111111 222223334444433 3447999999999999998876421
Q ss_pred ----------------CcccceEEEecCCCC
Q 024042 143 ----------------PERVEKVVIASSGVN 157 (273)
Q Consensus 143 ----------------~~~v~~~v~~~~~~~ 157 (273)
.++|.++++++-+..
T Consensus 106 ~~~~~~~~~~~l~~~~~~~v~avvl~GdP~~ 136 (207)
T d1g66a_ 106 PNQGYTNTAVQLSSSAVNMVKAAIFMGDPMF 136 (207)
T ss_dssp GGGTBCCCSCCSCHHHHHHEEEEEEESCTTC
T ss_pred ccccccccccCCCchhhhceeeEEEecCCCc
Confidence 135778888775543
|