Citrus Sinensis ID: 024129

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270--
Protein Sequence
MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQVSISNNLSCFFNM
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHccccEEEccccccEEEEHHHHHHHHHEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEcHHHHHHHHHHHHHHHHHHccEEEEEEc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccHHHHHHHHHHHccccccccEEEEEEEcccccccEEEEEEEEEEEHHEEEEEHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEcccEEEEEEccccEEccccccccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEEEEc
Coil and Loop (DISEMBL)
MDVQWLLIIHGLLTLLVVVSFLcgqwpifegtpiqRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYfccdrpnpvLQIIYLAIIGITYYFIAKssfsyipgyylsgfHRYTSLLGVGIGVFFFLLtsfadpgtvkaenvsqyqsaypydniiytekecstckipkparskhcsicnrcvarfdhhcgwmnncigerNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQVSISNnlscffnm
Flexible Loop (DISEMBL)
MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQVSISnnlscffnm
Low Complexity Region (SEG)
MDVQWlliihglltllvvvSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQVSISNNLSCFFNM
Disordered region (IsUnstruct)
**VQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQVSISNNLSCFF**
Disordered Region (DISOPRED)
*DVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQVSISNNLSCFFNM
Disordered Region (DISEMBL)
MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQVSISNNLSCFFNM
Disordered Region (DISPRO)
*DVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQVSISNNLSCFFNM
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILTVYYGIENSFRKLAPHVVQVSISNNLSCFFNM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	272	2.2.26 [Sep-21-2011]
Q3EBC2	397	Probable S-acyltransferas	yes	no	0.952	0.652	0.779	1e-123
O60069	356	Palmitoyltransferase swf1	yes	no	0.786	0.601	0.340	3e-27
Q9D6H5	343	Probable palmitoyltransfe	yes	no	0.492	0.390	0.392	3e-24
Q58DT3	343	Probable palmitoyltransfe	yes	no	0.540	0.428	0.371	3e-23
Q9NPG8	344	Probable palmitoyltransfe	yes	no	0.547	0.433	0.366	5e-23
Q7RWM9	429	Palmitoyltransferase SWF1	N/A	no	0.753	0.477	0.292	2e-22
Q5FVR1	343	Probable palmitoyltransfe	yes	no	0.334	0.265	0.489	3e-22
Q6BP23	377	Palmitoyltransferase SWF1	yes	no	0.713	0.514	0.305	2e-21
Q5A861	353	Palmitoyltransferase SWF1	N/A	no	0.720	0.555	0.324	8e-21
Q6FXC6	330	Palmitoyltransferase SWF1	yes	no	0.536	0.442	0.36	5e-20

>sp|Q3EBC2|ZDHC5_ARATH Probable S-acyltransferase At3g04970 OS=Arabidopsis thaliana GN=At3g04970 PE=2 SV=1

 Score =  442 bits (1136), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 202/259 (77%), Positives = 228/259 (88%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M VQWLL+ HG++TL VV+SFLCGQWPIF+GTP Q IHYFLTFGAYDYFLRFVG VFG K
Sbjct: 1   MAVQWLLVCHGMMTLTVVISFLCGQWPIFKGTPFQWIHYFLTFGAYDYFLRFVGFVFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGV 120
             + ILSVEYFCCDRPNP+LQ+IY+AI+G TY+  AKSSF YIPGYYL   H+YTS L V
Sbjct: 61  GTDVILSVEYFCCDRPNPILQVIYIAIMGSTYFLTAKSSFIYIPGYYLGDVHKYTSFLAV 120

Query: 121 GIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICN 180
            +GV  FLLT F+DPGTV AENVS+Y SAYPYD+IIY++KECSTCKIPKPARSKHCSICN
Sbjct: 121 IVGVILFLLTCFSDPGTVNAENVSRYISAYPYDDIIYSKKECSTCKIPKPARSKHCSICN 180

Query: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 240
           RCVARFDHHCGWMNNCIGERNT+YFMAFLLWH  LCLYG VA+GF+LAGR+KELRVV+IL
Sbjct: 181 RCVARFDHHCGWMNNCIGERNTKYFMAFLLWHFLLCLYGTVAIGFILAGRVKELRVVHIL 240

Query: 241 TVYYGIENSFRKLAPHVVQ 259
           TVYYG++ SFR LAP V+Q
Sbjct: 241 TVYYGVDKSFRSLAPRVIQ 259

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|O60069|SWF1_SCHPO Palmitoyltransferase swf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=swf1 PE=3 SV=1

 Score =  122 bits (305), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 119/223 (53%), Gaps = 9/223 (4%)

Query: 16  LVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGE-KAINAILSVEYFCCD 74
           L+V   L GQ P  + T I +++ F       Y L  + S + + +   A+ S+  +   
Sbjct: 16  LMVFILLFGQIPKLKYTVIGKLNRFFMV-TIPYHLHVLDSRYADGRCSAAMRSLSNYVLY 74

Query: 75  RPNPVLQIIYLAII--GITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSF 132
           + NP++  +YLA+I  GI  +FI  SS +       S     + L  V +      + + 
Sbjct: 75  KNNPLVVFLYLALITIGIASFFIYGSSLTQ----KFSIIDWISVLTSVLLPYISLYIAAK 130

Query: 133 ADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGW 192
           ++PG +  +N ++    +PYD  I+   +CSTCK  KPARSKHC +CN CV +FDHHC W
Sbjct: 131 SNPGKIDLKNWNEASRRFPYDYKIFFPNKCSTCKFEKPARSKHCRLCNICVEKFDHHCIW 190

Query: 193 MNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELR 235
           +NNC+G  N RYF  FLL  + L  + I+ LG+     L+++R
Sbjct: 191 INNCVGLNNARYFFLFLLCTIQLLFHSILRLGYHFNA-LRDMR 232

Palmitoyltransferase that targets several endosomal SNAREs. Palmitoylates the SNAREs at cysteine residues close to the cytoplasmic end of their transmembrane domain. May have a role in the cellular quality control of transmembrane domain-containing proteins.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9D6H5|ZDHC4_MOUSE Probable palmitoyltransferase ZDHHC4 OS=Mus musculus GN=Zdhhc4 PE=2 SV=1

 Score =  112 bits (280), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 1/135 (0%)

Query: 77  NPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPG 136
           +P   +++L + G+ Y       F Y      S  +     + + + + FF LT  A+PG
Sbjct: 65  HPTFIVLHLLLQGLVYAEYTCEVFGYCRELEFSLPYLLLPYVLLSVNLVFFTLTCAANPG 124

Query: 137 TVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNN 195
           T+   N S     Y +D++++ +   C TC + KPARSKHC +C+RCV RFDHHC W+NN
Sbjct: 125 TITKANESFLLQVYKFDDVMFPKNSRCPTCDLRKPARSKHCRLCDRCVHRFDHHCVWVNN 184

Query: 196 CIGERNTRYFMAFLL 210
           CIG  NTRYF+ +LL
Sbjct: 185 CIGAWNTRYFLIYLL 199

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q58DT3|ZDHC4_BOVIN Probable palmitoyltransferase ZDHHC4 OS=Bos taurus GN=ZDHHC4 PE=2 SV=1

 Score =  108 bits (271), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 1/148 (0%)

Query: 63  NAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGI 122
            A+LSV ++     N    +++L + G+ Y       F        S ++ +   L + +
Sbjct: 51  RAMLSVLHYLFHTRNYTFVVLHLILQGMVYTEYTWEIFGLCQQLEFSLYYLFLPYLLLIV 110

Query: 123 GVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPKPARSKHCSICNR 181
            + FF L+   +PGT+   N   +   Y +D +++ +   C TC + KPARSKHCS+CNR
Sbjct: 111 NLLFFTLSCVTNPGTITKANELLFLQVYEFDGVMFPKNVRCPTCDLRKPARSKHCSVCNR 170

Query: 182 CVARFDHHCGWMNNCIGERNTRYFMAFL 209
           CV RFDHHC W+NNCIG  NTRYF+++L
Sbjct: 171 CVHRFDHHCVWVNNCIGAWNTRYFLSYL 198

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NPG8|ZDHC4_HUMAN Probable palmitoyltransferase ZDHHC4 OS=Homo sapiens GN=ZDHHC4 PE=2 SV=1

 Score =  108 bits (270), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 4/153 (2%)

Query: 59  EKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLL 118
           ++A++ +L   ++     N    +++L + G+ Y       F Y     LS  +     L
Sbjct: 50  QRAVHGLL---HYLFHTRNHTFIVLHLVLQGMVYTEYTWEVFGYCQELELSLHYLLLPYL 106

Query: 119 GVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPKPARSKHCS 177
            +G+ +FFF LT   +PG +   N   +   Y +D +++ +   CSTC + KPARSKHCS
Sbjct: 107 LLGVNLFFFTLTCGTNPGIITKANELLFLHVYEFDEVMFPKNVRCSTCDLRKPARSKHCS 166

Query: 178 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLL 210
           +CN CV RFDHHC W+NNCIG  N RYF+ ++L
Sbjct: 167 VCNWCVHRFDHHCVWVNNCIGAWNIRYFLIYVL 199

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q7RWM9|SWF1_NEUCR Palmitoyltransferase SWF1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=swf-1 PE=3 SV=1

 Score =  106 bits (265), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 14/219 (6%)

Query: 13  LTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFC 72
           ++ +  V+F  G+ P    TPI  +H  +     +  L    ++   +   ++  +    
Sbjct: 14  ISFMTFVAFF-GRLPALRNTPISFLHRLIWIHLPNGILTVDRTLTNGRLTTSLTRLGRHL 72

Query: 73  CDRPNPVLQIIYLAIIGITYYF---IAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLL 129
               +P + I +  ++ +  Y    +A   FS+         H++   + +     F  L
Sbjct: 73  WYDQHPTILIFFFLLLSVGEYLYLPVAWPHFSFT--------HKFFGTIAILCPYIFLYL 124

Query: 130 TSFADPGTVKAENVSQYQSAYPYD-NIIYTEKECSTCKIPKPARSKHCSICNRCVARFDH 188
           +++ DPG + A+   +  + YPYD  + +    C TC + KPARSKHCSIC +CV R DH
Sbjct: 125 SAYTDPGVINAKTHVREMARYPYDFTLFHPGTSCETCHLLKPARSKHCSICKKCVGRMDH 184

Query: 189 HCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVL 227
           HC ++NNC+G  N R+F+  LL    L LYG V LG V+
Sbjct: 185 HCIFINNCVGANNQRWFILLLLSTAILTLYGGV-LGLVI 222

Palmitoyltransferase that targets several endosomal SNAREs. Palmitoylates the SNAREs at cysteine residues close to the cytoplasmic end of their transmembrane domain. May have a role in the cellular quality control of transmembrane domain-containing proteins.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5FVR1|ZDHC4_RAT Probable palmitoyltransferase ZDHHC4 OS=Rattus norvegicus GN=Zdhhc4 PE=2 SV=1

 Score =  105 bits (263), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 1/92 (1%)

Query: 120 VGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPKPARSKHCSI 178
           + + + FF LT   +PGT+   NV      Y +D +++ +   CSTC + KPARSKHC +
Sbjct: 108 LSVNLVFFTLTCSTNPGTITKTNVLLLLQVYEFDEVMFPKNSRCSTCDLRKPARSKHCRV 167

Query: 179 CNRCVARFDHHCGWMNNCIGERNTRYFMAFLL 210
           C+RCV RFDHHC W+NNCIG  NT YF+ +LL
Sbjct: 168 CDRCVHRFDHHCVWVNNCIGAWNTGYFLIYLL 199

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q6BP23|SWF1_DEBHA Palmitoyltransferase SWF1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=SWF1 PE=3 SV=1

 Score =  103 bits (256), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 113/216 (52%), Gaps = 22/216 (10%)

Query: 12  LLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDY--FLRFVGS-VFGEKAINAILSV 68
           LL+ +++   + G  P F  TPI ++   +    +D   ++ +V S VFG K +      
Sbjct: 13  LLSAILISIVIFGNSPNFRNTPIYKLRLKILRWNHDIIAWINYVDSHVFGNKLV------ 66

Query: 69  EYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYL-SGFHRYT---SLLGVGIGV 124
                     ++ + Y+ ++    +      +  +P +   SGFH      ++L + I  
Sbjct: 67  -----FYSGWLVPLFYIIVVSFCLHQFFTKVYKLLPLFVRKSGFHSTYIAFTILCIFIDT 121

Query: 125 FFFLLTSFADPGTVKAENVSQYQSAYPYDNIIY-TEKECSTCKIPKPARSKHCSICNRCV 183
           F   + +F++PG +   NV +  + +  + +I+  +  CSTC+I KPARSKHCSICN C+
Sbjct: 122 F---MATFSNPGKITTGNVDKVDNFFQNNELIFFADNYCSTCEIIKPARSKHCSICNNCI 178

Query: 184 ARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYG 219
             FDHHC W+NNC+G  N ++FM FL+ ++ L  YG
Sbjct: 179 MLFDHHCIWVNNCVGYYNYKWFMGFLIANINLLGYG 214

Palmitoyltransferase that targets several endosomal SNAREs. Palmitoylates the SNAREs at cysteine residues close to the cytoplasmic end of their transmembrane domain. May have a role in the cellular quality control of transmembrane domain-containing proteins.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5A861|SWF1_CANAL Palmitoyltransferase SWF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SWF1 PE=3 SV=1

 Score =  100 bits (250), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 20/216 (9%)

Query: 6   LLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAI 65
           L II  L T L+    L G  P F  TPIQ++   L   + D F  +      EK    +
Sbjct: 9   LTIISSLATFLL----LFGDSPSFRNTPIQKLRNSLLSISRDIFQFY--HWLDEKLNGQL 62

Query: 66  LSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYI--PGYYLSGFHRYTSLLGVGIG 123
           L +        N ++ + Y+ ++ + +      +   +  PG +   F  Y S++ +   
Sbjct: 63  LKIL-------NWLVPVGYVMVVTVCFQQFLTHTLPMLSSPGLF-RLFTIYFSMVLIYAS 114

Query: 124 VFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCV 183
               +L +F+DPG +   N+  Y    P   I +  K CSTC I KPARSKHCS+CN+C 
Sbjct: 115 T---ILAAFSDPGRITTINLKSYPYT-PNQLIFFDGKTCSTCHIAKPARSKHCSVCNQCF 170

Query: 184 ARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYG 219
             +DHHC W+NNC+G  N ++FM FL+ ++ +  YG
Sbjct: 171 LLYDHHCVWINNCVGYYNYKWFMLFLISNINMLGYG 206

Palmitoyltransferase that targets several endosomal SNAREs. Palmitoylates the SNAREs at cysteine residues close to the cytoplasmic end of their transmembrane domain. May have a role in the cellular quality control of transmembrane domain-containing proteins.

Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q6FXC6|SWF1_CANGA Palmitoyltransferase SWF1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SWF1 PE=3 SV=1

 Score = 98.2 bits (243), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 4/150 (2%)

Query: 79  VLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSL-LGVGIGVFFFLLTSFADPGT 137
           V+ + YL++     Y     +F+ I    L+    Y  + L + + +FF  ++    P +
Sbjct: 53  VVPVFYLSVYSYMVYIFYSRTFAIISPM-LTSIETYVVIPLMLILPLFFGSMSMIIKPDS 111

Query: 138 VKAENVSQYQSAYPYDNIIY-TEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNC 196
             A  +   +  YPYDN++Y  + EC TCK  KPARSKHC++CN C+   DHHC W+NNC
Sbjct: 112 SNAHQIGS-EKRYPYDNLLYFPQHECRTCKQVKPARSKHCTVCNSCIYLADHHCVWINNC 170

Query: 197 IGERNTRYFMAFLLWHLFLCLYGIVALGFV 226
           +G  N  YF +FL  +L L  Y  + L F+
Sbjct: 171 VGMGNYMYFYSFLCSNLLLLSYSFIRLIFI 200

Palmitoyltransferase that targets several endosomal SNAREs. Palmitoylates the SNAREs at cysteine residues close to the cytoplasmic end of their transmembrane domain. May have a role in the cellular quality control of transmembrane domain-containing proteins.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
225451106	393	PREDICTED: probable S-acyltransferase At	0.952	0.659	0.826	1e-128
449461076	392	PREDICTED: probable S-acyltransferase At	0.952	0.660	0.795	1e-125
449506565	392	PREDICTED: LOW QUALITY PROTEIN: probable	0.952	0.660	0.795	1e-125
356573040	392	PREDICTED: probable S-acyltransferase At	0.952	0.660	0.799	1e-123
356505896	392	PREDICTED: probable S-acyltransferase At	0.952	0.660	0.787	1e-122
357512111	393	Palmitoyltransferase ZDHHC2 [Medicago tr	0.952	0.659	0.787	1e-122
124360156	324	Zinc finger, DHHC-type [Medicago truncat	0.952	0.799	0.787	1e-122
12322859	264	unknown protein, contains TNFR/NGFR cyst	0.970	1.0	0.772	1e-122
297829012	398	zinc finger family protein [Arabidopsis	0.952	0.650	0.776	1e-122
42563512	397	DHHC-type zinc finger-containing protein	0.952	0.652	0.779	1e-121

>gi|225451106|ref|XP_002266567.1| PREDICTED: probable S-acyltransferase At3g04970 [Vitis vinifera] gi|298205009|emb|CBI34316.3| unnamed protein product [Vitis vinifera]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 214/259 (82%), Positives = 236/259 (91%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M VQWLL+ HGL TLLVVVSFLCGQWPIF+GT I+RIHYF+TFGAYDYFLRFVG VFG K
Sbjct: 1   MAVQWLLVCHGLATLLVVVSFLCGQWPIFQGTFIERIHYFITFGAYDYFLRFVGVVFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGV 120
             N ILSVE FCCDRPNP+LQ++YLAIIG TYYFI +S+FSYIPGYY+SG HRYTSLL V
Sbjct: 61  GTNVILSVENFCCDRPNPILQVVYLAIIGATYYFIVQSTFSYIPGYYISGVHRYTSLLAV 120

Query: 121 GIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICN 180
           G+GV  FLLTSF+DPGTVKAENVS+Y SAYPYDNIIY+EKECSTC+IPKPARSKHCSIC+
Sbjct: 121 GVGVVLFLLTSFSDPGTVKAENVSKYLSAYPYDNIIYSEKECSTCRIPKPARSKHCSICD 180

Query: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 240
           RCVARFDHHCGWMNNCIGERNTR+FMAFLLWH  LC+YG VA+G VLAGRLKEL+V++IL
Sbjct: 181 RCVARFDHHCGWMNNCIGERNTRFFMAFLLWHFLLCIYGTVAIGLVLAGRLKELKVIHIL 240

Query: 241 TVYYGIENSFRKLAPHVVQ 259
           TVYYGIENSF  LAPHVVQ
Sbjct: 241 TVYYGIENSFASLAPHVVQ 259

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461076|ref|XP_004148269.1| PREDICTED: probable S-acyltransferase At3g04970-like [Cucumis sativus]

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 206/259 (79%), Positives = 232/259 (89%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M VQWLL+ HG +TLLVVVSFLCGQWPIFEGTPIQRIH+F+T GAYDYFLRFVG +FG K
Sbjct: 1   MAVQWLLLCHGFVTLLVVVSFLCGQWPIFEGTPIQRIHHFITSGAYDYFLRFVGYLFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGV 120
             NA+L+VE FCCDRPNP+LQ+IYLAIIG+TYY I  S+F Y+PGYYLSG HRYTS L V
Sbjct: 61  GTNAVLAVESFCCDRPNPILQVIYLAIIGVTYYIITMSTFQYVPGYYLSGIHRYTSFLAV 120

Query: 121 GIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICN 180
            +GV  FLLTSF+DPGTV A+NV++Y SAYPYDNIIY+EKECSTCKIPKPARSKHCSIC+
Sbjct: 121 TVGVLLFLLTSFSDPGTVNADNVTRYLSAYPYDNIIYSEKECSTCKIPKPARSKHCSICD 180

Query: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 240
           RCVARFDHHCGWMNNCIGERNTRYFMAFLLWH  LC+YG VA+G VLAG+LKEL+V+Y+L
Sbjct: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHFLLCVYGTVAIGLVLAGQLKELKVIYVL 240

Query: 241 TVYYGIENSFRKLAPHVVQ 259
           TVYYGIENSF  LAP+VVQ
Sbjct: 241 TVYYGIENSFSGLAPYVVQ 259

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449506565|ref|XP_004162784.1| PREDICTED: LOW QUALITY PROTEIN: probable S-acyltransferase At3g04970-like [Cucumis sativus]

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 206/259 (79%), Positives = 232/259 (89%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M VQWLL+ HG +TLLVVVSFLCGQWPIFEGTPIQRIH+F+T GAYDYFLRFVG +FG K
Sbjct: 1   MAVQWLLLCHGFVTLLVVVSFLCGQWPIFEGTPIQRIHHFITSGAYDYFLRFVGYLFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGV 120
             NA+L+VE FCCDRPNP+LQ+IYLAIIG+TYY I  S+F Y+PGYYLSG HRYTS L V
Sbjct: 61  GTNAVLAVESFCCDRPNPILQVIYLAIIGVTYYIITMSTFQYVPGYYLSGIHRYTSFLAV 120

Query: 121 GIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICN 180
            +GV  FLLTSF+DPGTV A+NV++Y SAYPYDNIIY+EKECSTCKIPKPARSKHCSIC+
Sbjct: 121 TVGVLLFLLTSFSDPGTVNADNVTRYLSAYPYDNIIYSEKECSTCKIPKPARSKHCSICD 180

Query: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 240
           RCVARFDHHCGWMNNCIGERNTRYFMAFLLWH  LC+YG VA+G VLAG+LKEL+V+Y+L
Sbjct: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHFLLCVYGTVAIGLVLAGQLKELKVIYVL 240

Query: 241 TVYYGIENSFRKLAPHVVQ 259
           TVYYGIENSF  LAP+VVQ
Sbjct: 241 TVYYGIENSFSGLAPYVVQ 259

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573040|ref|XP_003554673.1| PREDICTED: probable S-acyltransferase At3g04970-like [Glycine max]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/259 (79%), Positives = 232/259 (89%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M V+WLL+ HGL+T +VVVSFLCG+WPIFEGT IQRIHYFLTFGAYDYFLRFVG+VFG K
Sbjct: 1   MGVEWLLVCHGLVTAVVVVSFLCGRWPIFEGTFIQRIHYFLTFGAYDYFLRFVGAVFGPK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGV 120
             +A+LSVEY+CCDRPNP+LQIIY+ IIG+TYYFIAKS F+YIPGYYLSG HRYTS L V
Sbjct: 61  CTDAVLSVEYYCCDRPNPLLQIIYIVIIGVTYYFIAKSCFAYIPGYYLSGIHRYTSFLAV 120

Query: 121 GIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICN 180
            +G+  FLLTSF+DPGT+  ENV+ Y SAYPYDNIIY+EKECSTCKIPKPARSKHCSIC+
Sbjct: 121 VVGILLFLLTSFSDPGTINTENVAHYISAYPYDNIIYSEKECSTCKIPKPARSKHCSICD 180

Query: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 240
           RCVARFDHHCGWMNNCIGE+NTRYFMAFLLWH  +CLYG VA+  VLAGRL+ELRVV IL
Sbjct: 181 RCVARFDHHCGWMNNCIGEKNTRYFMAFLLWHFLICLYGTVAIVLVLAGRLRELRVVDIL 240

Query: 241 TVYYGIENSFRKLAPHVVQ 259
           TVYYGIENSF  LAP+VVQ
Sbjct: 241 TVYYGIENSFLDLAPNVVQ 259

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505896|ref|XP_003521725.1| PREDICTED: probable S-acyltransferase At3g04970-like [Glycine max]

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 204/259 (78%), Positives = 232/259 (89%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M V+WLL+ HGL+T +VVVSFLCG+WPIFEGT IQRIHYFLTFGAYDYFLRFVG+VFG K
Sbjct: 1   MGVEWLLVCHGLVTAVVVVSFLCGRWPIFEGTFIQRIHYFLTFGAYDYFLRFVGAVFGPK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGV 120
             +++LSVEY+CCDRPNP+LQIIY+ IIG+TYYF+AKS F+YIPGYYLSG HRYTS L V
Sbjct: 61  CTDSVLSVEYYCCDRPNPLLQIIYIVIIGVTYYFVAKSCFAYIPGYYLSGIHRYTSFLAV 120

Query: 121 GIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICN 180
            +G+  FLLTSF+DPGT+  ENVS Y +AYPYDNIIY+EKECSTCKIPKPARSKHCSIC+
Sbjct: 121 AVGILLFLLTSFSDPGTINTENVSHYINAYPYDNIIYSEKECSTCKIPKPARSKHCSICD 180

Query: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 240
           RCVARFDHHCGWMNNCIGE+NT+YFMAFLLWH  +CLYG VA+  VLAGRL+ELRVV IL
Sbjct: 181 RCVARFDHHCGWMNNCIGEKNTQYFMAFLLWHFLICLYGTVAIVLVLAGRLRELRVVDIL 240

Query: 241 TVYYGIENSFRKLAPHVVQ 259
           TVYYGIENSF  LAP+VVQ
Sbjct: 241 TVYYGIENSFLDLAPNVVQ 259

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512111|ref|XP_003626344.1| Palmitoyltransferase ZDHHC2 [Medicago truncatula] gi|355501359|gb|AES82562.1| Palmitoyltransferase ZDHHC2 [Medicago truncatula]

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 204/259 (78%), Positives = 226/259 (87%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M V  LL+ HGL+T LVV+SFLCG+WPIFEGT IQRIHYFLTFGAYDYFLRFVG+VFG K
Sbjct: 1   MGVGLLLVCHGLVTALVVISFLCGRWPIFEGTFIQRIHYFLTFGAYDYFLRFVGAVFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGV 120
             NA+LSVEY+CCDRPNP+LQIIYL II  TYYF   SSF+YIPGYYLS  H+YTS    
Sbjct: 61  CTNAVLSVEYYCCDRPNPLLQIIYLVIISFTYYFAVNSSFAYIPGYYLSATHKYTSFFAA 120

Query: 121 GIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICN 180
            +G+  FLLTSF DPGT+KAENVSQY +AYPYDNII+++KECSTCKIPKPARSKHCSIC+
Sbjct: 121 AVGILLFLLTSFTDPGTIKAENVSQYLAAYPYDNIIFSKKECSTCKIPKPARSKHCSICD 180

Query: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 240
           RCVARFDHHCGWMNNCIGERNTRYFMAFLLWH  LC+YG V +G +LAGRLKEL+VVYIL
Sbjct: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHFLLCMYGTVLIGLILAGRLKELKVVYIL 240

Query: 241 TVYYGIENSFRKLAPHVVQ 259
           TVYYGIENSF  LAPHVVQ
Sbjct: 241 TVYYGIENSFWDLAPHVVQ 259

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|124360156|gb|ABN08172.1| Zinc finger, DHHC-type [Medicago truncatula]

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 204/259 (78%), Positives = 226/259 (87%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M V  LL+ HGL+T LVV+SFLCG+WPIFEGT IQRIHYFLTFGAYDYFLRFVG+VFG K
Sbjct: 1   MGVGLLLVCHGLVTALVVISFLCGRWPIFEGTFIQRIHYFLTFGAYDYFLRFVGAVFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGV 120
             NA+LSVEY+CCDRPNP+LQIIYL II  TYYF   SSF+YIPGYYLS  H+YTS    
Sbjct: 61  CTNAVLSVEYYCCDRPNPLLQIIYLVIISFTYYFAVNSSFAYIPGYYLSATHKYTSFFAA 120

Query: 121 GIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICN 180
            +G+  FLLTSF DPGT+KAENVSQY +AYPYDNII+++KECSTCKIPKPARSKHCSIC+
Sbjct: 121 AVGILLFLLTSFTDPGTIKAENVSQYLAAYPYDNIIFSKKECSTCKIPKPARSKHCSICD 180

Query: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 240
           RCVARFDHHCGWMNNCIGERNTRYFMAFLLWH  LC+YG V +G +LAGRLKEL+VVYIL
Sbjct: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHFLLCMYGTVLIGLILAGRLKELKVVYIL 240

Query: 241 TVYYGIENSFRKLAPHVVQ 259
           TVYYGIENSF  LAPHVVQ
Sbjct: 241 TVYYGIENSFWDLAPHVVQ 259

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12322859|gb|AAG51421.1|AC009465_21 unknown protein, contains TNFR/NGFR cysteine-rich region; 28705-27186 [Arabidopsis thaliana]

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 204/264 (77%), Positives = 230/264 (87%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M VQWLL+ HG++TL VV+SFLCGQWPIF+GTP Q IHYFLTFGAYDYFLRFVG VFG K
Sbjct: 1   MAVQWLLVCHGMMTLTVVISFLCGQWPIFKGTPFQWIHYFLTFGAYDYFLRFVGFVFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGV 120
             + ILSVEYFCCDRPNP+LQ+IY+AI+G TY+  AKSSF YIPGYYL   H+YTS L V
Sbjct: 61  GTDVILSVEYFCCDRPNPILQVIYIAIMGSTYFLTAKSSFIYIPGYYLGDVHKYTSFLAV 120

Query: 121 GIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICN 180
            +GV  FLLT F+DPGTV AENVS+Y SAYPYD+IIY++KECSTCKIPKPARSKHCSICN
Sbjct: 121 IVGVILFLLTCFSDPGTVNAENVSRYISAYPYDDIIYSKKECSTCKIPKPARSKHCSICN 180

Query: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 240
           RCVARFDHHCGWMNNCIGERNT+YFMAFLLWH  LCLYG VA+GF+LAGR+KELRVV+IL
Sbjct: 181 RCVARFDHHCGWMNNCIGERNTKYFMAFLLWHFLLCLYGTVAIGFILAGRVKELRVVHIL 240

Query: 241 TVYYGIENSFRKLAPHVVQVSISN 264
           TVYYG++ SFR LAP V+Q S  N
Sbjct: 241 TVYYGVDKSFRSLAPRVIQASKPN 264

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297829012|ref|XP_002882388.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297328228|gb|EFH58647.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  442 bits (1136), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 201/259 (77%), Positives = 228/259 (88%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M VQWLL+ HG++TL VV+SFLCGQWPIF+GTP Q IHYF+TFGAYDYFLRFVG VFG K
Sbjct: 1   MAVQWLLVCHGMMTLTVVISFLCGQWPIFKGTPFQWIHYFITFGAYDYFLRFVGLVFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGV 120
             + ILSVEYFCCDRPNP+LQ+IY+AI+G TY+  AKSSF YIPGYY+   H+YTS L V
Sbjct: 61  GTDVILSVEYFCCDRPNPILQVIYIAIMGSTYFLTAKSSFIYIPGYYIGDVHKYTSFLTV 120

Query: 121 GIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICN 180
            +G   FLLTSF+DPGTV AENVSQY SAYPYD+IIY++KECSTCKIPKPARSKHCSICN
Sbjct: 121 IVGAILFLLTSFSDPGTVNAENVSQYISAYPYDDIIYSKKECSTCKIPKPARSKHCSICN 180

Query: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 240
           RCVARFDHHCGWMNNCIGERNT+YFMAFLLWH  LCLYG VA+GF+LAGR+KELRVV+IL
Sbjct: 181 RCVARFDHHCGWMNNCIGERNTKYFMAFLLWHFLLCLYGTVAIGFILAGRVKELRVVHIL 240

Query: 241 TVYYGIENSFRKLAPHVVQ 259
           TVYYG++ SFR LAP V+Q
Sbjct: 241 TVYYGVDKSFRSLAPRVLQ 259

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42563512|ref|NP_187148.2| DHHC-type zinc finger-containing protein [Arabidopsis thaliana] gi|122214962|sp|Q3EBC2.1|ZDHC5_ARATH RecName: Full=Probable S-acyltransferase At3g04970; AltName: Full=Probable palmitoyltransferase At3g04970; AltName: Full=Zinc finger DHHC domain-containing protein At3g04970 gi|332640648|gb|AEE74169.1| DHHC-type zinc finger-containing protein [Arabidopsis thaliana]

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 202/259 (77%), Positives = 228/259 (88%)

Query: 1   MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
           M VQWLL+ HG++TL VV+SFLCGQWPIF+GTP Q IHYFLTFGAYDYFLRFVG VFG K
Sbjct: 1   MAVQWLLVCHGMMTLTVVISFLCGQWPIFKGTPFQWIHYFLTFGAYDYFLRFVGFVFGSK 60

Query: 61  AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGV 120
             + ILSVEYFCCDRPNP+LQ+IY+AI+G TY+  AKSSF YIPGYYL   H+YTS L V
Sbjct: 61  GTDVILSVEYFCCDRPNPILQVIYIAIMGSTYFLTAKSSFIYIPGYYLGDVHKYTSFLAV 120

Query: 121 GIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICN 180
            +GV  FLLT F+DPGTV AENVS+Y SAYPYD+IIY++KECSTCKIPKPARSKHCSICN
Sbjct: 121 IVGVILFLLTCFSDPGTVNAENVSRYISAYPYDDIIYSKKECSTCKIPKPARSKHCSICN 180

Query: 181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 240
           RCVARFDHHCGWMNNCIGERNT+YFMAFLLWH  LCLYG VA+GF+LAGR+KELRVV+IL
Sbjct: 181 RCVARFDHHCGWMNNCIGERNTKYFMAFLLWHFLLCLYGTVAIGFILAGRVKELRVVHIL 240

Query: 241 TVYYGIENSFRKLAPHVVQ 259
           TVYYG++ SFR LAP V+Q
Sbjct: 241 TVYYGVDKSFRSLAPRVIQ 259

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
TAIR|locus:2114895	397	AT3G04970 [Arabidopsis thalian	0.952	0.652	0.749	8.7e-111
DICTYBASE|DDB_G0283039	446	DDB_G0283039 "Probable palmito	0.783	0.477	0.375	7.5e-41
POMBASE|SPBC13G1.07	356	swf1 "palmitoyltransferase Swf	0.764	0.584	0.345	2.7e-29
MGI|MGI:1920131	343	Zdhhc4 "zinc finger, DHHC doma	0.492	0.390	0.392	9.6e-29
RGD|1308389	343	Zdhhc4 "zinc finger, DHHC-type	0.639	0.507	0.35	8.4e-28
UNIPROTKB|Q5FVR1	343	Zdhhc4 "Probable palmitoyltran	0.639	0.507	0.35	8.4e-28
ZFIN|ZDB-GENE-030131-9031	345	zdhhc4 "zinc finger, DHHC-type	0.308	0.243	0.569	1.4e-27
UNIPROTKB|Q58DT3	343	ZDHHC4 "Probable palmitoyltran	0.650	0.516	0.346	9.4e-27
UNIPROTKB|E1BKA0	343	ZDHHC4 "Probable palmitoyltran	0.650	0.516	0.340	2.5e-26
UNIPROTKB|Q9NPG8	344	ZDHHC4 "Probable palmitoyltran	0.547	0.433	0.379	4e-26

TAIR|locus:2114895 AT3G04970 [Arabidopsis thaliana (taxid:3702)]

 Score = 1094 (390.2 bits), Expect = 8.7e-111, P = 8.7e-111
 Identities = 194/259 (74%), Positives = 216/259 (83%)

Query:     1 MDVQWXXXXXXXXXXXXXXSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEK 60
             M VQW              SFLCGQWPIF+GTP Q IHYFLTFGAYDYFLRFVG VFG K
Sbjct:     1 MAVQWLLVCHGMMTLTVVISFLCGQWPIFKGTPFQWIHYFLTFGAYDYFLRFVGFVFGSK 60

Query:    61 AINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGV 120
               + ILSVEYFCCDRPNP+LQ+IY+AI+G TY+  AKSSF YIPGYYL   H+YTS L V
Sbjct:    61 GTDVILSVEYFCCDRPNPILQVIYIAIMGSTYFLTAKSSFIYIPGYYLGDVHKYTSFLAV 120

Query:   121 GIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICN 180
              +GV  FLLT F+DPGTV AENVS+Y SAYPYD+IIY++KECSTCKIPKPARSKHCSICN
Sbjct:   121 IVGVILFLLTCFSDPGTVNAENVSRYISAYPYDDIIYSKKECSTCKIPKPARSKHCSICN 180

Query:   181 RCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL 240
             RCVARFDHHCGWMNNCIGERNT+YFMAFLLWH  LCLYG VA+GF+LAGR+KELRVV+IL
Sbjct:   181 RCVARFDHHCGWMNNCIGERNTKYFMAFLLWHFLLCLYGTVAIGFILAGRVKELRVVHIL 240

Query:   241 TVYYGIENSFRKLAPHVVQ 259
             TVYYG++ SFR LAP V+Q
Sbjct:   241 TVYYGVDKSFRSLAPRVIQ 259

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

DICTYBASE|DDB_G0283039 DDB_G0283039 "Probable palmitoyltransferase ZDHHC4" [Dictyostelium discoideum (taxid:44689)]

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 80/213 (37%), Positives = 117/213 (54%)

Query:    20 SFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPV 79
             + L GQ        +  ++ FLT G  D+ + F      +K  N   S   +   +PN +
Sbjct:    21 TLLLGQSEFHRDGCVGSLYIFLTSGLQDWCVGFFARCCPKKLKNGSASCYNYFMYKPNRI 80

Query:    80 LQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVK 139
             LQ  YL ++   +YF     F YI G Y+S  H+Y +   +   +F F+L+S + PG + 
Sbjct:    81 LQGFYLTLVLSGFYFFYFDCFPYIGGPYISSNHKYGAFFAISFTLFTFVLSSNSTPGYIN 140

Query:   140 AENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGE 199
               N   ++++YPYD  +Y +K C +C   KPARSKHC IC+RCV RFDHHC W+NNC+GE
Sbjct:   141 DSNYKLFKNSYPYDRYLYIKKNCESCNFIKPARSKHCRICDRCVGRFDHHCPWINNCVGE 200

Query:   200 RNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLK 232
              N RYF+ F+     LC+YG    GF +   +K
Sbjct:   201 NNLRYFLLFVFSTSMLCMYGAYLCGFSMYSFMK 233

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

POMBASE|SPBC13G1.07 swf1 "palmitoyltransferase Swf1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 75/217 (34%), Positives = 119/217 (54%)

Query:    22 LCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAIL-SVEYFCCDRPNPVL 80
             L GQ P  + T I +++ F       Y L  + S + +   +A + S+  +   + NP++
Sbjct:    22 LFGQIPKLKYTVIGKLNRFFMV-TIPYHLHVLDSRYADGRCSAAMRSLSNYVLYKNNPLV 80

Query:    81 QIIYLAII--GITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTV 138
               +YLA+I  GI  +FI  SS +      +      TS+L   I ++   + + ++PG +
Sbjct:    81 VFLYLALITIGIASFFIYGSSLTQ-KFSIIDWISVLTSVLLPYISLY---IAAKSNPGKI 136

Query:   139 KAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIG 198
               +N ++    +PYD  I+   +CSTCK  KPARSKHC +CN CV +FDHHC W+NNC+G
Sbjct:   137 DLKNWNEASRRFPYDYKIFFPNKCSTCKFEKPARSKHCRLCNICVEKFDHHCIWINNCVG 196

Query:   199 ERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELR 235
               N RYF  FLL  + L  + I+ LG+     L+++R
Sbjct:   197 LNNARYFFLFLLCTIQLLFHSILRLGYHF-NALRDMR 232

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=ISO

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=ISO

GO:0030100 "regulation of endocytosis" evidence=ISO

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=ISS

GO:0090002 "establishment of protein localization to plasma membrane" evidence=IC

MGI|MGI:1920131 Zdhhc4 "zinc finger, DHHC domain containing 4" [Mus musculus (taxid:10090)]

 Score = 286 (105.7 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
 Identities = 53/135 (39%), Positives = 78/135 (57%)

Query:    77 NPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPG 136
             +P   +++L + G+ Y       F Y      S  +     + + + + FF LT  A+PG
Sbjct:    65 HPTFIVLHLLLQGLVYAEYTCEVFGYCRELEFSLPYLLLPYVLLSVNLVFFTLTCAANPG 124

Query:   137 TVKAENVSQYQSAYPYDNIIYTEKE-CSTCKIPKPARSKHCSICNRCVARFDHHCGWMNN 195
             T+   N S     Y +D++++ +   C TC + KPARSKHC +C+RCV RFDHHC W+NN
Sbjct:   125 TITKANESFLLQVYKFDDVMFPKNSRCPTCDLRKPARSKHCRLCDRCVHRFDHHCVWVNN 184

Query:   196 CIGERNTRYFMAFLL 210
             CIG  NTRYF+ +LL
Sbjct:   185 CIGAWNTRYFLIYLL 199

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1308389 Zdhhc4 "zinc finger, DHHC-type containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 279 (103.3 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
 Identities = 63/180 (35%), Positives = 92/180 (51%)

Query:    32 TPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGIT 91
             T  QR+   +  GA     R     F ++A+  +L  + F     +P    ++L + G+ 
Sbjct:    25 TKSQRLKAVVLGGA-QVCARVTPQCF-QRAVQTLLH-QLF--HTRHPAFLALHLLLQGLV 79

Query:    92 YYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYP 151
             Y       FSY      S        + + + + FF LT   +PGT+   NV      Y 
Sbjct:    80 YAEYTYEVFSYCRELEFSLPCLLLPYVLLSVNLVFFTLTCSTNPGTITKTNVLLLLQVYE 139

Query:   152 YDNIIYTEKE-CSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLL 210
             +D +++ +   CSTC + KPARSKHC +C+RCV RFDHHC W+NNCIG  NT YF+ +LL
Sbjct:   140 FDEVMFPKNSRCSTCDLRKPARSKHCRVCDRCVHRFDHHCVWVNNCIGAWNTGYFLIYLL 199

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

UNIPROTKB|Q5FVR1 Zdhhc4 "Probable palmitoyltransferase ZDHHC4" [Rattus norvegicus (taxid:10116)]

 Score = 279 (103.3 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
 Identities = 63/180 (35%), Positives = 92/180 (51%)

Query:    32 TPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVLQIIYLAIIGIT 91
             T  QR+   +  GA     R     F ++A+  +L  + F     +P    ++L + G+ 
Sbjct:    25 TKSQRLKAVVLGGA-QVCARVTPQCF-QRAVQTLLH-QLF--HTRHPAFLALHLLLQGLV 79

Query:    92 YYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYP 151
             Y       FSY      S        + + + + FF LT   +PGT+   NV      Y 
Sbjct:    80 YAEYTYEVFSYCRELEFSLPCLLLPYVLLSVNLVFFTLTCSTNPGTITKTNVLLLLQVYE 139

Query:   152 YDNIIYTEKE-CSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLL 210
             +D +++ +   CSTC + KPARSKHC +C+RCV RFDHHC W+NNCIG  NT YF+ +LL
Sbjct:   140 FDEVMFPKNSRCSTCDLRKPARSKHCRVCDRCVHRFDHHCVWVNNCIGAWNTGYFLIYLL 199

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-030131-9031 zdhhc4 "zinc finger, DHHC-type containing 4" [Danio rerio (taxid:7955)]

 Score = 284 (105.0 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
 Identities = 49/86 (56%), Positives = 63/86 (73%)

Query:   126 FFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTE-KECSTCKIPKPARSKHCSICNRCVA 184
             F+L  S  DPGT+   N+S +   Y YD  ++ +  +CSTC++ KPARSKHC +CNRCV 
Sbjct:   117 FYLCCS-RDPGTLTKSNLSAHLKIYQYDEKLFQQGMKCSTCQLIKPARSKHCRVCNRCVQ 175

Query:   185 RFDHHCGWMNNCIGERNTRYFMAFLL 210
             RFDHHC W+NNCIG +NTRYFM +LL
Sbjct:   176 RFDHHCVWVNNCIGAQNTRYFMLYLL 201

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q58DT3 ZDHHC4 "Probable palmitoyltransferase ZDHHC4" [Bos taurus (taxid:9913)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 62/179 (34%), Positives = 96/179 (53%)

Query:    64 AILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIG 123
             A+LSV ++     N    +++L + G+ Y       F        S ++ +   L + + 
Sbjct:    52 AMLSVLHYLFHTRNYTFVVLHLILQGMVYTEYTWEIFGLCQQLEFSLYYLFLPYLLLIVN 111

Query:   124 VFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPKPARSKHCSICNRC 182
             + FF L+   +PGT+   N   +   Y +D +++ +   C TC + KPARSKHCS+CNRC
Sbjct:   112 LLFFTLSCVTNPGTITKANELLFLQVYEFDGVMFPKNVRCPTCDLRKPARSKHCSVCNRC 171

Query:   183 VARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILT 241
             V RFDHHC W+NNCIG  NTRYF+++L + L      +  +  V   RL  +  VY+ T
Sbjct:   172 VHRFDHHCVWVNNCIGAWNTRYFLSYL-FTLTASAATMAVVSTVFLVRLVVMSDVYLQT 229

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E1BKA0 ZDHHC4 "Probable palmitoyltransferase ZDHHC4" [Bos taurus (taxid:9913)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 61/179 (34%), Positives = 95/179 (53%)

Query:    64 AILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIG 123
             A+LSV ++     N    +++L + G+ Y       F        S ++ +   L + + 
Sbjct:    52 AMLSVLHYLFHTRNYTFVVLHLILQGMVYTEYTWEIFGLCQQLEFSLYYLFLPYLLLIVN 111

Query:   124 VFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPKPARSKHCSICNRC 182
             + FF L+   +PGT+   N   +   Y +D +++ +   C TC + KPARSKHC +CNRC
Sbjct:   112 LLFFTLSCVTNPGTITKANELLFLQVYEFDGVMFPKNVRCPTCDLRKPARSKHCGVCNRC 171

Query:   183 VARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYILT 241
             V RFDHHC W+NNCIG  NTRYF+++L + L      +  +  V   RL  +  VY+ T
Sbjct:   172 VHRFDHHCVWVNNCIGAWNTRYFLSYL-FTLTASAATMAVVSTVFLVRLVVMSDVYLQT 229

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q9NPG8 ZDHHC4 "Probable palmitoyltransferase ZDHHC4" [Homo sapiens (taxid:9606)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 58/153 (37%), Positives = 86/153 (56%)

Query:    59 EKAINAILSVEYFCCDRPNPVLQIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLL 118
             ++A++ +L   Y    R N    +++L + G+ Y       F Y     LS  +     L
Sbjct:    50 QRAVHGLL--HYLFHTR-NHTFIVLHLVLQGMVYTEYTWEVFGYCQELELSLHYLLLPYL 106

Query:   119 GVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEK-ECSTCKIPKPARSKHCS 177
              +G+ +FFF LT   +PG +   N   +   Y +D +++ +   CSTC + KPARSKHCS
Sbjct:   107 LLGVNLFFFTLTCGTNPGIITKANELLFLHVYEFDEVMFPKNVRCSTCDLRKPARSKHCS 166

Query:   178 ICNRCVARFDHHCGWMNNCIGERNTRYFMAFLL 210
             +CN CV RFDHHC W+NNCIG  N RYF+ ++L
Sbjct:   167 VCNWCVHRFDHHCVWVNNCIGAWNIRYFLIYVL 199

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3EBC2	ZDHC5_ARATH	2, ., 3, ., 1, ., -	0.7799	0.9522	0.6523	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	272
pfam01529	167	pfam01529, zf-DHHC, DHHC palmitoyltransferase	3e-32
COG5273	309	COG5273, COG5273, Uncharacterized protein containi	6e-23

>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase

 Score =  116 bits (292), Expect = 3e-32
 Identities = 45/109 (41%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 124 VFFFLLTSFADPGTVKAENVS-----QYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSI 178
           ++ +  T F DPG V           Q        +     K CSTC I KP RS HC +
Sbjct: 1   LWSYFKTIFTDPGYVPKNPTEKEQEKQPDEESEEGDEEDELKFCSTCNIIKPPRSHHCRV 60

Query: 179 CNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVL 227
           CNRCV RFDHHC W+NNCIG RN +YF+ FLL+     +  +V   + L
Sbjct: 61  CNRCVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLLVLSFYYL 109

This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

 Score = 95.2 bits (237), Expect = 6e-23
 Identities = 53/139 (38%), Positives = 71/139 (51%), Gaps = 11/139 (7%)

Query: 84  YLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVKAEN- 142
              I+  T   I KS    +             ++ + +  F +LL   +DPG +     
Sbjct: 37  LSRIVVYTLLVIVKSLSLVVLF-------IILFIVILVLASFSYLLLLVSDPGYLGENIT 89

Query: 143 VSQYQ---SAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGE 199
           +S Y+   S    D    TE  CSTC I KP RS HCSICNRCV +FDHHC W+NNC+G 
Sbjct: 90  LSGYRETISRLLDDGKFGTENFCSTCNIYKPPRSHHCSICNRCVLKFDHHCPWINNCVGF 149

Query: 200 RNTRYFMAFLLWHLFLCLY 218
           RN R+F  FLL+ + + L 
Sbjct: 150 RNYRFFYQFLLYTILVALV 168

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	272
KOG1312	341	consensus DHHC-type Zn-finger proteins [General fu	100.0
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	100.0
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	100.0
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	100.0
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	99.97
KOG1314	414	consensus DHHC-type Zn-finger protein [General fun	99.97
KOG1313	309	consensus DHHC-type Zn-finger proteins [General fu	99.93
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.92
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	85.79
PF13240	23	zinc_ribbon_2: zinc-ribbon domain	84.46
PF13248	26	zf-ribbon_3: zinc-ribbon domain	80.73

>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=9.6e-56  Score=396.21  Aligned_cols=248  Identities=41%  Similarity=0.632  Sum_probs=226.5

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCccCChhhHHHHHHHhhhhhHHHhhhhhhccccchhhhccccceeeccCCCcc
Q 024129            1 MDVQWLLIIHGLLTLLVVVSFLCGQWPIFEGTPIQRIHYFLTFGAYDYFLRFVGSVFGEKAINAILSVEYFCCDRPNPVL   80 (272)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~lfG~~p~~r~t~i~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~p~~   80 (272)
                      ||++|++++|+..++++++++++|+.|.|++||+ |.|+++..++|+.+.+.|++.+        .+...++++.+||.+
T Consensus         1 Mdf~wllLf~lai~l~vVlilLcgq~p~lKgt~~-w~~~ff~~~ip~~llr~v~~y~--------~sl~~~~l~~tni~L   71 (341)
T KOG1312|consen    1 MDFLWLLLFYLAIVLGVVLILLCGQTPSLKGTAR-WGAQFFSCIIPECLLRAVHGYL--------RSLLFHTLNHTNIVL   71 (341)
T ss_pred             CchhHHHHHHHHHHHHHhhhhhcCCCcccccccc-cceeeEEECccHHHHHHHHHHH--------HHheeeeccCCChhH
Confidence            9999999999999999999999999999999999 9999999999999999998654        456778999999999


Q ss_pred             eeeeeeeehhhhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHhccCCccccCCCcccccccCCCCCccccc-
Q 024129           81 QIIYLAIIGITYYFIAKSSFSYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTE-  159 (272)
Q Consensus        81 ~i~~l~l~~~~~~~f~~~~~~~ip~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dPG~i~~~~~~~~~~~~~~d~~~~~~-  159 (272)
                      +++|.+++.-   ...+..+.+.+++..|..+++....+++++.+++.+++.+|||.++++|..+..+++|||.+++.+ 
T Consensus        72 ~lvy~a~m~~---~~~~esfiy~~~l~lsl~~~il~~l~vivp~i~f~ltc~snpg~i~k~n~s~~~~~ypYDy~if~k~  148 (341)
T KOG1312|consen   72 HLVYQAMMYT---EYTWESFIYCQELELSLHYLILPYLLVIVPLIFFTLTCGSNPGIITKANESLFLHVYPYDYVIFPKN  148 (341)
T ss_pred             HHHHHHHHhh---hhhheeeEeccchhhhHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhhhccceeccCccceeecCC
Confidence            8888877653   344556667888888999999999999999999999999999999999999999999999999888 


Q ss_pred             cccccCCCCCCCCCccCccCCccccCCCCcccccccccccCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcccchh
Q 024129          160 KECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFV-LAGRLKELRVVY  238 (272)
Q Consensus       160 ~~C~tC~~~kP~RskHC~~C~~CV~r~DHHC~WinnCIG~~N~r~F~lFL~~~~i~~~y~~~~~~~~-l~~~~~~~~~~~  238 (272)
                      ..|+||+++||+||||||+|||||+||||||.|+|||||++|.|||++||+++..++.|+++..+.+ +.+..+..+...
T Consensus       149 ~kCSTCki~KPARSKHCsiCNrCV~rfDHHCiWiNNCIG~~N~ryF~lFLL~~i~l~~yaivrlgfi~ln~~sdl~q~v~  228 (341)
T KOG1312|consen  149 VKCSTCKIRKPARSKHCSICNRCVHRFDHHCIWINNCIGAWNIRYFLLFLLTLISLATYAIVRLGFIVLNVMSDLYQEVY  228 (341)
T ss_pred             CccccccCCCccccccchHHHHHHHHhccceEeeecccccchHHHHHHHHHHHHHHHHHHHHHHHheehhhccccchhee
Confidence            9999999999999999999999999999999999999999999999999999999999999998887 777788899999


Q ss_pred             hhHHhhccccccccchhhhhhh
Q 024129          239 ILTVYYGIENSFRKLAPHVVQV  260 (272)
Q Consensus       239 ~~~~y~~i~~~f~~~~~~v~~~  260 (272)
                      +++.+++....+.++++.+++-
T Consensus       229 ilt~~~g~~ks~~~L~~yl~la  250 (341)
T KOG1312|consen  229 ILTLGHGHVKSTVFLIQYLFLA  250 (341)
T ss_pred             eeeeeecchhhHHHHHHHHHHH
Confidence            9999999888888777775543

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=3.3e-35  Score=270.95  Aligned_cols=194  Identities=26%  Similarity=0.418  Sum_probs=136.3

Q ss_pred             Ccceeeeeeeehhhhhhhhhhhc-ccccccchhhHHHHHHHHHHHHHHHHHHHHhccCCccccCCCccccccc-------
Q 024129           78 PVLQIIYLAIIGITYYFIAKSSF-SYIPGYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSA-------  149 (272)
Q Consensus        78 p~~~i~~l~l~~~~~~~f~~~~~-~~ip~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dPG~i~~~~~~~~~~~-------  149 (272)
                      ++++++++.+++++|++++...- ..+.....+....+....+.++..++|.+++++|||.+|.+...+..+.       
T Consensus        13 ~~~~~~i~~~~~~~yy~~v~~~c~~~i~~~~~~~~~ll~~~~ll~m~~~sy~~~vf~~pg~vp~~~~~~~~~~~~~~~~~   92 (307)
T KOG1315|consen   13 WIPVLIILLVIGWTYYVYVAVLCILSISLTIPSVLLLLLFHLLLIMFLWSYFRTVFTDPGRVPDSYRPSVEDEDSLENGS   92 (307)
T ss_pred             chhheeeeeeEEEEEEEeehhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHheeEecCCCCccccCCCcCccccccccC
Confidence            77778888899999888764331 1111111234444455566677788999999999999996543221111       


Q ss_pred             -CCCC------CccccccccccCCCCCCCCCccCccCCccccCCCCcccccccccccCChHHHHHHHHHHHHHHHHHHHH
Q 024129          150 -YPYD------NIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVA  222 (272)
Q Consensus       150 -~~~d------~~~~~~~~C~tC~~~kP~RskHC~~C~~CV~r~DHHC~WinnCIG~~N~r~F~lFL~~~~i~~~y~~~~  222 (272)
                       .+.+      +.....|+|.+|+..||+||||||+|+|||.||||||||+|||||.+|||+|++|++|+.+.+.|.++.
T Consensus        93 ~~~~~~~~~~~~~~g~~R~C~kC~~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl~y~~l~~~~~lv~  172 (307)
T KOG1315|consen   93 DNERDLPGYTRTSDGAVRYCDKCKCIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFFLLFLFYTNLYSIYVLVT  172 (307)
T ss_pred             cccccceeeEecCCCCceeecccccccCCccccchhhhhhhhccccCCcceeceecccchHHHHHHHHHHHHHHHHHHHH
Confidence             1111      112246999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHhhhc-----c--cchhhhHHhhccc--cccccchhhhhhhHhhcCcccccCC
Q 024129          223 LGFVLAGRLKE-----L--RVVYILTVYYGIE--NSFRKLAPHVVQVSISNNLSCFFNM  272 (272)
Q Consensus       223 ~~~~l~~~~~~-----~--~~~~~~~~y~~i~--~~f~~~~~~v~~~l~~~~~~~~~~~  272 (272)
                      ....+....++     .  ...........+.  ..+++ +...+.||++.|.||.|.|
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~l~~-~l~~h~~Li~~N~TTiE~~  230 (307)
T KOG1315|consen  173 TLIGFTKYFQGGAGPSSLLLFFIVFLFLVAIAFSISLSG-LLCFHTYLILKNKTTIEAY  230 (307)
T ss_pred             HHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCchhHhhh
Confidence            77766555422     0  0111111111111  11233 6778899999999999975

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=100.00  E-value=1.2e-35  Score=252.55  Aligned_cols=148  Identities=37%  Similarity=0.659  Sum_probs=113.4

Q ss_pred             HHHHHHhccCCccccCCCcccc------------cccCCCCCccccccccccCCCCCCCCCccCccCCccccCCCCcccc
Q 024129          125 FFFLLTSFADPGTVKAENVSQY------------QSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGW  192 (272)
Q Consensus       125 ~~~~~~~~~dPG~i~~~~~~~~------------~~~~~~d~~~~~~~~C~tC~~~kP~RskHC~~C~~CV~r~DHHC~W  192 (272)
                      ++|++++.+|||++|+++.++.            ....+.++.....++|++|+..||+|||||+.||+||.|+||||+|
T Consensus         2 ~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~w   81 (174)
T PF01529_consen    2 WSYFLTIFIDPGYVPRSNPDEDQRQEEKEEEQNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHCPW   81 (174)
T ss_pred             EEehhhheECCcccCCccccccccccccccccchhhhhhccccCCCCEECcccCCcCCCcceeccccccccccccccchh
Confidence            3578899999999998711100            0111223444567999999999999999999999999999999999


Q ss_pred             cccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccch----------hhhHHhhccccccccchhhhhhhHh
Q 024129          193 MNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV----------YILTVYYGIENSFRKLAPHVVQVSI  262 (272)
Q Consensus       193 innCIG~~N~r~F~lFL~~~~i~~~y~~~~~~~~l~~~~~~~~~~----------~~~~~y~~i~~~f~~~~~~v~~~l~  262 (272)
                      +|||||++|||+|++|+++..+.+++..+.....+.....+....          .+...+..+...+.+.+...+.+++
T Consensus        82 ~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  161 (174)
T PF01529_consen   82 LGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSSFWIFSNFSSIFLLIISIFFFIFVGFLLIFQLYLI  161 (174)
T ss_pred             hccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999998877776554432221          1222333333446777777899999


Q ss_pred             hcCcccccCC
Q 024129          263 SNNLSCFFNM  272 (272)
Q Consensus       263 ~~~~~~~~~~  272 (272)
                      ..|.|++|.+
T Consensus       162 ~~n~Tt~E~~  171 (174)
T PF01529_consen  162 LRNITTYERI  171 (174)
T ss_pred             HcCCcHHHHH
Confidence            9999999964

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=5e-34  Score=263.55  Aligned_cols=156  Identities=33%  Similarity=0.607  Sum_probs=109.2

Q ss_pred             HHHHHHHHHHHHHHhcc---CCccccCCC--cccccccCC------CCCccccccccccCCCCCCCCCccCccCCccccC
Q 024129          117 LLGVGIGVFFFLLTSFA---DPGTVKAEN--VSQYQSAYP------YDNIIYTEKECSTCKIPKPARSKHCSICNRCVAR  185 (272)
Q Consensus       117 ~~~~~l~~~~~~~~~~~---dPG~i~~~~--~~~~~~~~~------~d~~~~~~~~C~tC~~~kP~RskHC~~C~~CV~r  185 (272)
                      .+...+.+.....+..+   |||.+|++.  ..+..+..+      .++...+.++|.+|+..||+|||||++||+||.|
T Consensus        60 ~if~~~~~~~~~~~~~~~~sdpg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~rPpRs~HCsvC~~CV~r  139 (299)
T KOG1311|consen   60 AIFFLLNILNLMLACFRMLSDPGIVPRADDEQIEDPERAPLYKNVDVNGIQVEWKYCDTCQLYRPPRSSHCSVCNNCVLR  139 (299)
T ss_pred             HHHHHHHHHHHHHHHhcccCCCceecCcccCCCCCccccccCCCcccCCcccceEEcCcCcccCCCCcccchhhcccccc
Confidence            33344444455555555   999999852  111111111      1334456799999999999999999999999999


Q ss_pred             CCCcccccccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccch-------------hhhHHhhcccccccc
Q 024129          186 FDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVV-------------YILTVYYGIENSFRK  252 (272)
Q Consensus       186 ~DHHC~WinnCIG~~N~r~F~lFL~~~~i~~~y~~~~~~~~l~~~~~~~~~~-------------~~~~~y~~i~~~f~~  252 (272)
                      |||||||+|||||++|||+|+.|+++..+.++|........+.....+....             .++..+-.....+.+
T Consensus       140 fDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  219 (299)
T KOG1311|consen  140 FDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKVNLTPVLIPAGTFLSALLGLLSALFLAFTS  219 (299)
T ss_pred             cCCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999888877655433211111             111111112222444


Q ss_pred             chhhhhhhHhhcCcccccCC
Q 024129          253 LAPHVVQVSISNNLSCFFNM  272 (272)
Q Consensus       253 ~~~~v~~~l~~~~~~~~~~~  272 (272)
                      .+...+.+++.+|+|++|++
T Consensus       220 ~l~~fh~~li~~~~Tt~e~~  239 (299)
T KOG1311|consen  220 ALLCFHIYLIKSGSTTYESI  239 (299)
T ss_pred             HHHHhheeeEecCcchhhhh
Confidence            56667889999999999874

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=99.97  E-value=2.4e-32  Score=253.75  Aligned_cols=157  Identities=34%  Similarity=0.555  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHhccCCccccCCCc----ccccccCCCCCccccccccccCCCCCCCCCccCccCCccccCCCCcc
Q 024129          115 TSLLGVGIGVFFFLLTSFADPGTVKAENV----SQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHC  190 (272)
Q Consensus       115 ~~~~~~~l~~~~~~~~~~~dPG~i~~~~~----~~~~~~~~~d~~~~~~~~C~tC~~~kP~RskHC~~C~~CV~r~DHHC  190 (272)
                      ...+...+...++++...+|||+.++++.    ++..+....++....+++|++|+.+||+|||||+.|||||+||||||
T Consensus        61 ~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~KP~RS~HC~~Cn~CV~k~DHHC  140 (309)
T COG5273          61 LFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETISRLLDDGKFGTENFCSTCNIYKPPRSHHCSICNRCVLKFDHHC  140 (309)
T ss_pred             hhhhhhhhHHHhhHHHhhcCCCccCccccccchhhhhhhhhhcCccccceeccccccccCCCCccchhhcchhhccCccC
Confidence            33444556677889999999999985532    22222233355666789999999999999999999999999999999


Q ss_pred             cccccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhh--H------HhhccccccccchhhhhhhHh
Q 024129          191 GWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVYIL--T------VYYGIENSFRKLAPHVVQVSI  262 (272)
Q Consensus       191 ~WinnCIG~~N~r~F~lFL~~~~i~~~y~~~~~~~~l~~~~~~~~~~~~~--~------~y~~i~~~f~~~~~~v~~~l~  262 (272)
                      ||+|||||++|||+|+.|++++.....+.++.....+......+......  .      ..-.....+...+-...++++
T Consensus       141 ~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~f~~~~~~~~~~~~~~  220 (309)
T COG5273         141 PWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHDTSLAICFLIFGCSLLGVVFFIITTLLLLFLIYLI  220 (309)
T ss_pred             cccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999888888888887776655322111111  0      111112334556677889999


Q ss_pred             hcCcccccC
Q 024129          263 SNNLSCFFN  271 (272)
Q Consensus       263 ~~~~~~~~~  271 (272)
                      ..|+|++|.
T Consensus       221 ~~~~t~~e~  229 (309)
T COG5273         221 LNNLTTIEF  229 (309)
T ss_pred             HhhHHHHHH
Confidence            999999885

>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]

Probab=99.97  E-value=8.3e-32  Score=247.60  Aligned_cols=161  Identities=27%  Similarity=0.490  Sum_probs=122.5

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHhccCCccccCCCcccccccCCCCCccccccccccCCCCCCCCCccCccCCcccc
Q 024129          105 GYYLSGFHRYTSLLGVGIGVFFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVA  184 (272)
Q Consensus       105 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dPG~i~~~~~~~~~~~~~~d~~~~~~~~C~tC~~~kP~RskHC~~C~~CV~  184 (272)
                      ..+.+..+.++..+...+.+..|+.++++.||++|.+..+|.    |.|..  -.++|..|+.+|++||||||.|||||.
T Consensus        43 ss~~g~~n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~----~~D~~--~lqfCk~CqgYKapRSHHCrkCnrCvm  116 (414)
T KOG1314|consen   43 SSFLGVPNQITFLLWTSMILYNYFNAIFTGPGFVPLGWKPEN----PKDEM--FLQFCKKCQGYKAPRSHHCRKCNRCVM  116 (414)
T ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCC----ChhHH--HHHHHhhccCcCCCccccchHHHHHHH
Confidence            344567777777778888889999999999999999887753    33421  248999999999999999999999999


Q ss_pred             CCCCcccccccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchh---------------hhHHhhccccc
Q 024129          185 RFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAGRLKELRVVY---------------ILTVYYGIENS  249 (272)
Q Consensus       185 r~DHHC~WinnCIG~~N~r~F~lFL~~~~i~~~y~~~~~~~~l~~~~~~~~~~~---------------~~~~y~~i~~~  249 (272)
                      +|||||||+|||||..||-+|+.||++..+.|+.++++...+++..+..+..+.               +...-++++..
T Consensus       117 kMDHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~tiI~~~~~~~~Iy~~W~~~~g~~hlp~v~ft~~~li~~vfslgla  196 (414)
T KOG1314|consen  117 KMDHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTIILVCAQYRGIYFRWYIKYGLRHLPIVFFTLSSLIALVFSLGLA  196 (414)
T ss_pred             hhccCCcchhhcccccccHHHHHHHHHHHHhcccceeeehhHHHHHHHHHHHhhcccccCceeeccHHHHHHHHHHhHHH
Confidence            999999999999999999999999999999999998887777766554432111               11222233221


Q ss_pred             -----cccchhhhhhhHhhcCcccccC
Q 024129          250 -----FRKLAPHVVQVSISNNLSCFFN  271 (272)
Q Consensus       250 -----f~~~~~~v~~~l~~~~~~~~~~  271 (272)
                           -.+++.-.+...+..|||--|+
T Consensus       197 ~gv~la~t~Lf~~qlk~Il~nrt~IE~  223 (414)
T KOG1314|consen  197 IGVVLALTMLFFIQLKQILNNRTGIES  223 (414)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCcchHH
Confidence                 1233344455578889987775

>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=99.93  E-value=4.8e-26  Score=203.94  Aligned_cols=72  Identities=40%  Similarity=1.011  Sum_probs=66.7

Q ss_pred             cccccccCCCCCCCCCccCccCCccccCCCCcccccccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024129          158 TEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHLFLCLYGIVALGFVLAG  229 (272)
Q Consensus       158 ~~~~C~tC~~~kP~RskHC~~C~~CV~r~DHHC~WinnCIG~~N~r~F~lFL~~~~i~~~y~~~~~~~~l~~  229 (272)
                      ...+|.+|..+||||+|||+.|||||.||||||||+|||||..|||||++|++++.+.+.|..+...+....
T Consensus       101 ~~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHryFFlFl~~ltlat~~~~i~~~~~w~~  172 (309)
T KOG1313|consen  101 NDSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHRYFFLFLFYLTLATSYAAIMCVYTWID  172 (309)
T ss_pred             cccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            357999999999999999999999999999999999999999999999999999999999988887665543

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.92  E-value=2.3e-25  Score=218.05  Aligned_cols=110  Identities=39%  Similarity=0.639  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHhccCCccccCCCccc--ccccCCCCCccccc-cccccCCCCCCCCCccCccCCccccCCCCccccccc
Q 024129          119 GVGIGVFFFLLTSFADPGTVKAENVSQ--YQSAYPYDNIIYTE-KECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNN  195 (272)
Q Consensus       119 ~~~l~~~~~~~~~~~dPG~i~~~~~~~--~~~~~~~d~~~~~~-~~C~tC~~~kP~RskHC~~C~~CV~r~DHHC~Winn  195 (272)
                      .++..++.+.+..-+|||+++.+....  .....+..+....+ ++|.+|.++||.|||||++|||||+||||||||++|
T Consensus       377 ~~l~~~~~f~~~~rsDPg~i~~~~~~~~~tIs~l~d~gkf~~en~FC~~clirKp~rSkhc~vcnrcVarfDHhCPwi~n  456 (600)
T KOG0509|consen  377 SVLAYFITFGLFLRSDPGFIPTSTEVGRETISQLIDFGKFDLENRFCLTCLIRKPLRSKHCSVCNRCVARFDHHCPWIGN  456 (600)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCchhhHHHHHHHhhccccccccccceeeeeeecCCccchhhhhHHHHhccccCCCcccc
Confidence            333445566666679999998764322  11122222233334 799999999999999999999999999999999999


Q ss_pred             ccccCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024129          196 CIGERNTRYFMAFLLWHLFLCLYGIVALGFVLA  228 (272)
Q Consensus       196 CIG~~N~r~F~lFL~~~~i~~~y~~~~~~~~l~  228 (272)
                      |||.+|||+|+.|++.....+.+.++...+.+.
T Consensus       457 cVG~kNh~~F~~Fl~~l~~~~~~~l~~~~~y~~  489 (600)
T KOG0509|consen  457 CVGLKNHRLFVFFLLTLLTVIVFYLYLCLYYIM  489 (600)
T ss_pred             ccCccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999998888877777655543

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=85.79  E-value=0.72  Score=46.76  Aligned_cols=86  Identities=16%  Similarity=-0.033  Sum_probs=62.2

Q ss_pred             HHHHHHhccCCccccCCCcccccccCCCCCccccccccccCCCCCCCCCccCccCCccccCCCCcccccccccccCChHH
Q 024129          125 FFFLLTSFADPGTVKAENVSQYQSAYPYDNIIYTEKECSTCKIPKPARSKHCSICNRCVARFDHHCGWMNNCIGERNTRY  204 (272)
Q Consensus       125 ~~~~~~~~~dPG~i~~~~~~~~~~~~~~d~~~~~~~~C~tC~~~kP~RskHC~~C~~CV~r~DHHC~WinnCIG~~N~r~  204 (272)
                      ..++..+..+||++-..+..-.... +--+...-...|.+|....+.+-.++..+-.+...+++||+|+. +|+.+|...
T Consensus       292 ~~~~~~~~~~~g~i~~~~~~w~i~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fw~~~~w~~-~i~~~~~~~  369 (600)
T KOG0509|consen  292 GLFYFISSWLPGVIFLINSLWLIKG-LALGKLVLTCLCATRKIVGFLLRPPLLSGFFLSTLFWFYYFWFS-KITPYTLFD  369 (600)
T ss_pred             HHHHHHHhhccchhhhhhhHHHHhh-hhhhhhhhheeccchhhccccccchhHHHHHHHHHHHHHHhhhe-eccchhhhh
Confidence            3445567789999976553111111 11122334578999999999999999999999999999999999 999999875


Q ss_pred             HHH-HHHHH
Q 024129          205 FMA-FLLWH  212 (272)
Q Consensus       205 F~l-FL~~~  212 (272)
                      +-. |+++.
T Consensus       370 ~~~~~i~~~  378 (600)
T KOG0509|consen  370 FHYCFIISV  378 (600)
T ss_pred             hHHHHHHHH
Confidence            444 44443

>PF13240 zinc_ribbon_2: zinc-ribbon domain

Probab=84.46  E-value=0.6  Score=26.90  Aligned_cols=21  Identities=24%  Similarity=0.645  Sum_probs=18.8

Q ss_pred             ccccCCCCCCCCCccCccCCc
Q 024129          161 ECSTCKIPKPARSKHCSICNR  181 (272)
Q Consensus       161 ~C~tC~~~kP~RskHC~~C~~  181 (272)
                      +|+.|...-++.++.|..||.
T Consensus         1 ~Cp~CG~~~~~~~~fC~~CG~   21 (23)
T PF13240_consen    1 YCPNCGAEIEDDAKFCPNCGT   21 (23)
T ss_pred             CCcccCCCCCCcCcchhhhCC
Confidence            689999999999999999985

>PF13248 zf-ribbon_3: zinc-ribbon domain

Probab=80.73  E-value=1  Score=26.54  Aligned_cols=23  Identities=26%  Similarity=0.603  Sum_probs=19.8

Q ss_pred             ccccccCCCCCCCCCccCccCCc
Q 024129          159 EKECSTCKIPKPARSKHCSICNR  181 (272)
Q Consensus       159 ~~~C~tC~~~kP~RskHC~~C~~  181 (272)
                      .++|+.|...-++.++.|..||.
T Consensus         2 ~~~Cp~Cg~~~~~~~~fC~~CG~   24 (26)
T PF13248_consen    2 EMFCPNCGAEIDPDAKFCPNCGA   24 (26)
T ss_pred             cCCCcccCCcCCcccccChhhCC
Confidence            36899999988999999999885

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	272
d2ayja1	56	Ribosomal protein L40e {Sulfolobus solfataricus [T	81.11

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=81.11  E-value=0.52  Score=30.47  Aligned_cols=24  Identities=29%  Similarity=0.769  Sum_probs=21.4

Q ss_pred             cccccccCCCCCCCCCccCccCCc
Q 024129          158 TEKECSTCKIPKPARSKHCSICNR  181 (272)
Q Consensus       158 ~~~~C~tC~~~kP~RskHC~~C~~  181 (272)
                      ..+.|..|..+-|+|+..|+.||.
T Consensus        18 ~k~ICrkC~AR~p~rAt~CRKCg~   41 (56)
T d2ayja1          18 LKKVCRKCGALNPIRATKCRRCHS   41 (56)
T ss_dssp             CCEEETTTCCEECTTCSSCTTTCC
T ss_pred             hhHHHhhccccCCccccccccCCC
Confidence            357899999999999999998875