Citrus Sinensis ID: 024132

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270--
MAASVQLNAKLLGPAFIVKPATKHFLKPARIRCAAAATAPPTKRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKRHGKLCSVDKANVLEVMVYMLKQFSLVAHVSFTLNVHVLDCEKVILLV
ccccEEcccEEcccccccccccccccccHHHHHHccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHcccCEEEEEccCEEEEEccccccccHHHHHHHHHccEEEEcccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccHHHHccccEEEEEEcccccccccccccCCcccccCEEEEcccccHHHHHHHHHHHHHHHHHccccccEEEccHHHHHHHHHHHHHHHHccccEEEcEEEEccccccccc
*******NAKLLGPAF****ATKHFLKPARIRCAAAATAPPTKRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKRHGKLCSVDKANVLEVMVYMLKQFSLVAHVSFTLNVHVLDCEKVILLV
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MAASVQLNAKLLGPAFIVKPATKHFLKPARIRCAAAATAPPTKRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKRHGKLCSVDKANVLEVMVYMLKQFSLVAHVSFTLNVHVLDCEKVILLV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
3-isopropylmalate dehydrogenase 2, chloroplastic Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.probableP93832
3-isopropylmalate dehydrogenase, chloroplastic Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.probableP29102

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.1.-.-Acting on the CH-OH group of donors.probable
1.1.1.-15-hydroxyprostaglandin dehydrogenase (NAD(+)).probable
1.1.1.853-isopropylmalate dehydrogenase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3R8W, chain A
Confidence level:very confident
Coverage over the Query: 43-271
View the alignment between query and template
View the model in PyMOL