Citrus Sinensis ID: 024143
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 272 | ||||||
| 225432384 | 343 | PREDICTED: uncharacterized protein LOC10 | 0.797 | 0.632 | 0.755 | 5e-96 | |
| 449466191 | 341 | PREDICTED: uncharacterized protein LOC10 | 0.930 | 0.741 | 0.632 | 5e-94 | |
| 224100351 | 304 | predicted protein [Populus trichocarpa] | 0.761 | 0.680 | 0.756 | 8e-93 | |
| 255551645 | 287 | conserved hypothetical protein [Ricinus | 0.738 | 0.700 | 0.787 | 1e-91 | |
| 297736912 | 410 | unnamed protein product [Vitis vinifera] | 0.797 | 0.529 | 0.727 | 3e-91 | |
| 356512227 | 353 | PREDICTED: uncharacterized protein LOC10 | 0.893 | 0.688 | 0.648 | 5e-88 | |
| 356524994 | 353 | PREDICTED: uncharacterized protein LOC10 | 0.893 | 0.688 | 0.636 | 2e-85 | |
| 297827493 | 344 | hypothetical protein ARALYDRAFT_903150 [ | 0.937 | 0.741 | 0.625 | 7e-84 | |
| 145360782 | 351 | Rossmann-fold NAD(P)-binding domain-cont | 0.775 | 0.601 | 0.715 | 2e-83 | |
| 51970960 | 351 | unnamed protein product [Arabidopsis tha | 0.775 | 0.601 | 0.715 | 3e-83 |
| >gi|225432384|ref|XP_002276706.1| PREDICTED: uncharacterized protein LOC100251108 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 356 bits (914), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 164/217 (75%), Positives = 187/217 (86%)
Query: 45 PLVASSSSSSMATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWR 104
P + S S T +V+ASS++GA EE + +S G VGENDLLIVGPGVLGRLVAE+WR
Sbjct: 42 PSFRAKRSVSTDTRLRVSASSTLGAPNEEMETSSFGLVGENDLLIVGPGVLGRLVAEKWR 101
Query: 105 QEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRL 164
+EHPGCQIYGQTMT DHHDEL+ +GI PSLK + T +FPYVIFCAPPSR+ DYP DVRL
Sbjct: 102 EEHPGCQIYGQTMTTDHHDELVKIGINPSLKGVKTTHQFPYVIFCAPPSRTSDYPADVRL 161
Query: 165 AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCV 224
AA +W+GEGSFLFTSSSA +DC+DNG+CDED PVVPIGRSPRTDVLL AEK +LEFGGCV
Sbjct: 162 AASNWSGEGSFLFTSSSAPFDCNDNGSCDEDGPVVPIGRSPRTDVLLNAEKGVLEFGGCV 221
Query: 225 LRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYE 261
LRLAGLYKADRGAHVYWL+KGTV++RPDHILNLIHYE
Sbjct: 222 LRLAGLYKADRGAHVYWLKKGTVEARPDHILNLIHYE 258
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449466191|ref|XP_004150810.1| PREDICTED: uncharacterized protein LOC101221257 [Cucumis sativus] gi|449496699|ref|XP_004160201.1| PREDICTED: uncharacterized protein LOC101225299 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 167/264 (63%), Positives = 204/264 (77%), Gaps = 11/264 (4%)
Query: 1 MGTISCTNTVSLNGACTRF---FAADSLSSKASSVFFNNRTWKLKLRPLVASSSSSSMAT 57
M I+ ++ + RF F +D L+S S F+ R + + P MA
Sbjct: 1 MEVITSFSSCKFHAKLPRFSTSFFSDHLASTTRSSFYPAR-FNYRRLPF-------KMAA 52
Query: 58 NFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117
QV+ASS+IGA E+ + +SSG G +DLLI+GPGVLGRLVA++WR+EHPGC+++GQT
Sbjct: 53 PLQVSASSTIGASDEKLETSSSGFTGAHDLLIIGPGVLGRLVAQKWREEHPGCEVHGQTF 112
Query: 118 TADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLF 177
TADHH+ELI +GI PSLK + ++FPYVIFCAPPSRS DYPGDVRLA SW+GEG+FLF
Sbjct: 113 TADHHEELIQLGIQPSLKGGDVGRRFPYVIFCAPPSRSPDYPGDVRLAGSSWDGEGTFLF 172
Query: 178 TSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKADRGA 237
TSSSA YDC+DNG CDEDSPV+PIGRSPRTD+LLK+EK+++EFGGCVLRLAGLYKADRGA
Sbjct: 173 TSSSAPYDCNDNGPCDEDSPVMPIGRSPRTDLLLKSEKIVIEFGGCVLRLAGLYKADRGA 232
Query: 238 HVYWLQKGTVDSRPDHILNLIHYE 261
H YWL+KGTVD RPDHILNLIHYE
Sbjct: 233 HSYWLEKGTVDVRPDHILNLIHYE 256
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100351|ref|XP_002311843.1| predicted protein [Populus trichocarpa] gi|222851663|gb|EEE89210.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 345 bits (886), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 183/218 (83%), Gaps = 11/218 (5%)
Query: 55 MATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYG 114
MA QV+A S+IGA EE ASSG VGENDLLIVGPGVLGRLVAE+WRQEHPGCQ+YG
Sbjct: 1 MAAPLQVSAFSTIGARNEELGTASSGLVGENDLLIVGPGVLGRLVAEKWRQEHPGCQVYG 60
Query: 115 QTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGS 174
QT+T DHHDELI MGI PSLK T+ATQ++PYVIFCAPPSR+ DYPGDVR AALSWNG+GS
Sbjct: 61 QTVTTDHHDELIKMGINPSLKGTKATQQYPYVIFCAPPSRTSDYPGDVREAALSWNGDGS 120
Query: 175 FLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKA- 233
F+FTSSSA YDC DNG C+EDSPVVPIGRSPRTDVLLKAEKV+LE GGC +RLAGLY +
Sbjct: 121 FVFTSSSAPYDCFDNGQCNEDSPVVPIGRSPRTDVLLKAEKVVLESGGCAIRLAGLYISF 180
Query: 234 ----------DRGAHVYWLQKGTVDSRPDHILNLIHYE 261
+RGAH YWL+KGTV+ RPDHILNLIHYE
Sbjct: 181 SVLNYVDFINNRGAHAYWLEKGTVEVRPDHILNLIHYE 218
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255551645|ref|XP_002516868.1| conserved hypothetical protein [Ricinus communis] gi|223543956|gb|EEF45482.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 175/207 (84%), Gaps = 6/207 (2%)
Query: 55 MATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYG 114
MA FQV+ASS++GA EE SS VGENDLLIVGPGVLGRLVAE+WRQEHPGCQ+YG
Sbjct: 1 MANPFQVSASSTMGATNEELDAVSSSLVGENDLLIVGPGVLGRLVAEKWRQEHPGCQVYG 60
Query: 115 QTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGS 174
QT+T DHHDELI +GI PSLK T+ +FPYVIFCAPPSR+ DYPGDVR AALSWNGEGS
Sbjct: 61 QTLTTDHHDELIKIGINPSLKGTKPIHQFPYVIFCAPPSRTSDYPGDVREAALSWNGEGS 120
Query: 175 FLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKAD 234
FLFTSSSA YDC DNG CDEDSPVVPIGRSPRTDVLLKAEKV+LE GCV YKAD
Sbjct: 121 FLFTSSSAPYDCYDNGDCDEDSPVVPIGRSPRTDVLLKAEKVVLESDGCV------YKAD 174
Query: 235 RGAHVYWLQKGTVDSRPDHILNLIHYE 261
RGAHVYWLQKG V+ RPDHILNLIHYE
Sbjct: 175 RGAHVYWLQKGIVEVRPDHILNLIHYE 201
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736912|emb|CBI26113.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/220 (72%), Positives = 184/220 (83%), Gaps = 3/220 (1%)
Query: 45 PLVASSSSSSMATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWR 104
P + S S T +V+ASS++GA EE + +S G VGENDLLIVGPGVLGRLVAE+WR
Sbjct: 106 PSFRAKRSVSTDTRLRVSASSTLGAPNEEMETSSFGLVGENDLLIVGPGVLGRLVAEKWR 165
Query: 105 QEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRL 164
+EHPGCQIYGQTMT DHHDEL+ +GI PSLK + T +FPYVIFCAPPSR+ DYP DVRL
Sbjct: 166 EEHPGCQIYGQTMTTDHHDELVKIGINPSLKGVKTTHQFPYVIFCAPPSRTSDYPADVRL 225
Query: 165 AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCV 224
AA +W+GEGSFLFTSSSA +DC+DNG+CDED PVVPIGRSPRTDVLL AEK +LEFGGCV
Sbjct: 226 AASNWSGEGSFLFTSSSAPFDCNDNGSCDEDGPVVPIGRSPRTDVLLNAEKGVLEFGGCV 285
Query: 225 LRLAGLY---KADRGAHVYWLQKGTVDSRPDHILNLIHYE 261
LRLAGLY + GAHVYWL+KGTV++RPDHILNLIHYE
Sbjct: 286 LRLAGLYISFQILEGAHVYWLKKGTVEARPDHILNLIHYE 325
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356512227|ref|XP_003524822.1| PREDICTED: uncharacterized protein LOC100804718 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 330 bits (845), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 164/253 (64%), Positives = 191/253 (75%), Gaps = 10/253 (3%)
Query: 9 TVSLNGACTRFFAADSLSSKASSVFFNNRTWKLKLRPLVASSSSSSMATNFQVTASSSIG 68
T+ N C RF ++S NR +KL +S S S AT+ +V+ ++
Sbjct: 25 TLCDNFRCLRFLTPKPPHLRSSHSKLGNR---VKL-----TSFSMSKATHLKVSQAALSS 76
Query: 69 AVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM 128
+ +GE+DLLIVGPGVLGRLVA++W QE PG Q+YGQT+T DHH+ELI M
Sbjct: 77 TEESLSSSPRV--IGEHDLLIVGPGVLGRLVAQKWSQELPGSQVYGQTVTTDHHNELIQM 134
Query: 129 GITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIYDCSD 188
GI PSLKWTEAT KFP VI+CAPPSR+ DY G++RLAALSWNGEGSFLFTSSSA YDC+D
Sbjct: 135 GINPSLKWTEATHKFPNVIYCAPPSRTPDYAGNIRLAALSWNGEGSFLFTSSSAPYDCND 194
Query: 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKADRGAHVYWLQKGTVD 248
NG CDEDSPVVPIGRSPR DVLLKAE V+LEFGGCV+RLAGLYKADRGAH Y+L+KG VD
Sbjct: 195 NGPCDEDSPVVPIGRSPRVDVLLKAENVVLEFGGCVVRLAGLYKADRGAHNYFLEKGVVD 254
Query: 249 SRPDHILNLIHYE 261
SRPDHILNLIHYE
Sbjct: 255 SRPDHILNLIHYE 267
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356524994|ref|XP_003531112.1| PREDICTED: uncharacterized protein LOC100776260 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/253 (63%), Positives = 186/253 (73%), Gaps = 10/253 (3%)
Query: 9 TVSLNGACTRFFAADSLSSKASSVFFNNRTWKLKLRPLVASSSSSSMATNFQVTASSSIG 68
T+ N C RF ++S NR A +S SM+ Q+ S
Sbjct: 25 TLCDNVRCLRFLTPKPPHLRSSHSNLGNR----------AQLTSFSMSKATQLKVSQDAL 74
Query: 69 AVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM 128
+ E+ +S +GE+DLLIVGPGVLGRLVA++WRQE PG Q+YGQT++ DHH+ELI M
Sbjct: 75 SSTEQSLSSSPRVIGEHDLLIVGPGVLGRLVAQKWRQEIPGSQVYGQTVSTDHHNELIQM 134
Query: 129 GITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIYDCSD 188
GI PS KWTEAT FP VI+CAPPSR+ DY G+VRLAALSWNGEGSFLFTSSSA YDC+D
Sbjct: 135 GINPSKKWTEATHTFPNVIYCAPPSRTPDYAGNVRLAALSWNGEGSFLFTSSSAPYDCND 194
Query: 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKADRGAHVYWLQKGTVD 248
NG CDEDSPVVPIGRSP DVLLKAE V+LEFGGCVLRLAGLYKADRGAH Y+L+K VD
Sbjct: 195 NGPCDEDSPVVPIGRSPGVDVLLKAENVVLEFGGCVLRLAGLYKADRGAHNYYLEKRIVD 254
Query: 249 SRPDHILNLIHYE 261
SRPDH+LNLIHYE
Sbjct: 255 SRPDHVLNLIHYE 267
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297827493|ref|XP_002881629.1| hypothetical protein ARALYDRAFT_903150 [Arabidopsis lyrata subsp. lyrata] gi|297327468|gb|EFH57888.1| hypothetical protein ARALYDRAFT_903150 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 316 bits (809), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 165/264 (62%), Positives = 189/264 (71%), Gaps = 9/264 (3%)
Query: 1 MGTISCTNTVSLNGAC--TRFFAADSLSSKASSVFFNNRTWKLKLRP-LVASSSSSSMAT 57
MG ISC + + N T F+ S S + S+ F R + K + S+SS MAT
Sbjct: 1 MGFISCISYPTTNSKILSTHHFSKQSTSPSSFSLKFALRREEDKPKSSFFLPSTSSKMAT 60
Query: 58 NFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117
Q ++SS+IG + K S +G NDLLIVGPGVLGRLVAEQWRQEHP CQI GQT+
Sbjct: 61 PIQASSSSTIGETSDGLKVQSHVSIGANDLLIVGPGVLGRLVAEQWRQEHPECQIVGQTV 120
Query: 118 TADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLF 177
T +HHDEL +GI PSLK TE KF YVIFCAPPS+S DY G+VR AA +WNGEGSFLF
Sbjct: 121 TTNHHDELEKLGIKPSLKGTEYGGKFSYVIFCAPPSQSADYAGEVRNAASNWNGEGSFLF 180
Query: 178 TSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKADRGA 237
TSSSA YDC DNG C+EDSPVVP+G+SPRTDVLLKAEKV+LE GG VLRL RGA
Sbjct: 181 TSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLT------RGA 234
Query: 238 HVYWLQKGTVDSRPDHILNLIHYE 261
H YWL KGTVD+RPDHILNLIHYE
Sbjct: 235 HTYWLSKGTVDARPDHILNLIHYE 258
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145360782|ref|NP_181441.3| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|17473602|gb|AAL38267.1| unknown protein [Arabidopsis thaliana] gi|21386945|gb|AAM47876.1| unknown protein [Arabidopsis thaliana] gi|330254538|gb|AEC09632.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 170/211 (80%)
Query: 51 SSSSMATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGC 110
+SS MAT Q ++SS+IG + K S +G NDLLIVGPGVLGRLVAEQWRQEHP
Sbjct: 55 TSSLMATPIQASSSSTIGETSDGLKVQSHVSIGANDLLIVGPGVLGRLVAEQWRQEHPES 114
Query: 111 QIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWN 170
QI+GQT+T +HH EL N+GI PSLK TE KF YVIFCAPPS+S DY G+VR AA +WN
Sbjct: 115 QIFGQTVTTNHHGELENLGIKPSLKGTEYGGKFSYVIFCAPPSQSADYAGEVRNAASNWN 174
Query: 171 GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGL 230
GEGSFLFTSSSA YDC DNG C+EDSPVVP+G+SPRTDVLLKAEKV+LE GG VLRLAGL
Sbjct: 175 GEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGL 234
Query: 231 YKADRGAHVYWLQKGTVDSRPDHILNLIHYE 261
Y RGAH YWL K T+D+RPDHILNLIHYE
Sbjct: 235 YTETRGAHTYWLSKETIDARPDHILNLIHYE 265
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|51970960|dbj|BAD44172.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 170/211 (80%)
Query: 51 SSSSMATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGC 110
+SS MAT Q ++SS+IG + K S +G NDLLIVGPGVLGRLVAEQWRQEHP
Sbjct: 55 TSSLMATPIQASSSSTIGETSDGLKVQSHVSIGANDLLIVGPGVLGRLVAEQWRQEHPES 114
Query: 111 QIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWN 170
QI+GQT+T +HH EL N+GI PSLK TE KF YVIFCAPPS+S DY G+VR AA +WN
Sbjct: 115 QIFGQTVTTNHHGELENLGIKPSLKGTEYGGKFSYVIFCAPPSQSADYAGEVRNAASNWN 174
Query: 171 GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGL 230
GEGSFLFTSSSA YDC DNG C+EDSPVVP+G+SPRTDVLLKAEKV+LE GG VLRLAGL
Sbjct: 175 GEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGL 234
Query: 231 YKADRGAHVYWLQKGTVDSRPDHILNLIHYE 261
Y RGAH YWL K T+D+RPDHILNLIHYE
Sbjct: 235 YTETRGAHTYWLSKETIDARPDHILNLIHYE 265
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 272 | ||||||
| TAIR|locus:2065001 | 351 | EMB2799 "EMBRYO DEFECTIVE 2799 | 0.959 | 0.743 | 0.618 | 1.2e-79 | |
| UNIPROTKB|Q88BE7 | 282 | PSPTO_0070 "Uncharacterized pr | 0.610 | 0.588 | 0.290 | 0.00075 |
| TAIR|locus:2065001 EMB2799 "EMBRYO DEFECTIVE 2799" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 164/265 (61%), Positives = 191/265 (72%)
Query: 1 MGTISCTNTVSLNGAC--TRFFAADSLSSKAS-SVFFNNRTWKLKLR-PLVAXXXXXXMA 56
MG ISC + ++N T F+ S S+ +S S+ F R + K + MA
Sbjct: 1 MGFISCISFPTINSRILSTHHFSKHSTSASSSYSLKFALRRQEDKPKVSFFLPLTSSLMA 60
Query: 57 TNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQT 116
T Q ++SS+IG + K S +G NDLLIVGPGVLGRLVAEQWRQEHP QI+GQT
Sbjct: 61 TPIQASSSSTIGETSDGLKVQSHVSIGANDLLIVGPGVLGRLVAEQWRQEHPESQIFGQT 120
Query: 117 MTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFL 176
+T +HH EL N+GI PSLK TE KF YVIFCAPPS+S DY G+VR AA +WNGEGSFL
Sbjct: 121 VTTNHHGELENLGIKPSLKGTEYGGKFSYVIFCAPPSQSADYAGEVRNAASNWNGEGSFL 180
Query: 177 FTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKADRG 236
FTSSSA YDC DNG C+EDSPVVP+G+SPRTDVLLKAEKV+LE GG VLRLAGLY RG
Sbjct: 181 FTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLYTETRG 240
Query: 237 AHVYWLQKGTVDSRPDHILNLIHYE 261
AH YWL K T+D+RPDHILNLIHYE
Sbjct: 241 AHTYWLSKETIDARPDHILNLIHYE 265
|
|
| UNIPROTKB|Q88BE7 PSPTO_0070 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
|---|
Score = 110 (43.8 bits), Expect = 0.00075, P = 0.00075
Identities = 56/193 (29%), Positives = 87/193 (45%)
Query: 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFP-- 144
LLI G G +G +A + Q H G ++G T + +G+ L + ++P
Sbjct: 6 LLIAGCGDIGSRLATRL-QPH-GWVVHGLRRTVSELPAGV-IGVEGDLFEAQRPAQWPTA 62
Query: 145 ---YVIFCAPPSRSLDYPGDVRLA-------ALSW---NGEGS--FLFTSSSAIYDCSDN 189
YV++CA PS+ D G R+A LSW G+ +F SSS +Y +
Sbjct: 63 ALDYVVYCATPSQR-DETG-YRMAYVEGLRNVLSWLEQTGQQPKRLIFVSSSGVYGQQNG 120
Query: 190 GACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLYKADRGAHVYWLQKG-T 246
DE+S P G + V+L+AE++ L G +RL G+Y R +++G +
Sbjct: 121 EWVDENSATEPGGYTGT--VMLEAEQLALNSGLPATAVRLTGIYGPGRSDLSNRVRQGHS 178
Query: 247 VDSRPDHILNLIH 259
V P N IH
Sbjct: 179 VRVDPPVYANRIH 191
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 272 266 0.00094 114 3 11 22 0.48 33
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 614 (65 KB)
Total size of DFA: 219 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.24u 0.13s 21.37t Elapsed: 00:00:01
Total cpu time: 21.24u 0.13s 21.37t Elapsed: 00:00:01
Start: Tue May 21 01:29:57 2013 End: Tue May 21 01:29:58 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_Genewise1_v1.C_LG_VIII2645 | hypothetical protein (304 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 272 | |||
| cd05266 | 251 | cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | 5e-18 |
| >gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | Back alignment and domain information |
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Score = 80.4 bits (199), Expect = 5e-18
Identities = 53/199 (26%), Positives = 79/199 (39%), Gaps = 24/199 (12%)
Query: 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP----SLKWTEATQK 142
+LI+G G LG+ +A Q + G Q+ G T + + G+TP +
Sbjct: 1 VLILGCGYLGQRLARQLLAQ--GWQVTGTTRSPEKLAADRPAGVTPLAADLTQPGLL-AD 57
Query: 143 FPYVIFCAPPSRSLDYPG-DVRLAAL-----SWNGEGSFLFTSSSAIY-DCSDNGAC-DE 194
+++ PP G D L AL ++ SS+ +Y D G DE
Sbjct: 58 VDHLVISLPPPAGSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVYGDQ--QGEWVDE 115
Query: 195 DSPVVPIGRSPRTDVLLKAEKVILEFGG---CVLRLAGLYKADRGAHVYWLQKGTVDSRP 251
SP P + LL+AE+ +L G +LRLAG+Y R Q
Sbjct: 116 TSPPNP--STESGRALLEAEQALLALGSKPTTILRLAGIYGPGRHPLRRLAQGTGRPPAG 173
Query: 252 DHILNLIHYEVNTLVLFIA 270
+ N IH V+ LV +A
Sbjct: 174 NAPTNRIH--VDDLVGALA 190
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Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 272 | |||
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.95 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.95 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.94 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.94 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.94 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.93 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.93 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.93 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.93 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.92 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.92 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.92 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.91 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.91 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.91 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.91 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.91 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.91 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.91 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.91 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.91 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.91 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.9 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.9 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.9 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.9 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.9 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.9 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.9 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.89 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.89 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.89 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.89 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.89 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.89 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.89 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.88 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.88 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.88 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.88 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.88 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.88 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.87 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.87 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.87 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.87 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.86 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.86 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.85 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.85 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.84 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.83 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.83 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.81 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.8 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.79 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.79 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.79 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.78 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.76 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.75 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.74 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.68 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.68 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.66 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.65 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.63 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.61 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.57 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.54 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.53 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.49 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.48 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.48 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.48 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.47 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.44 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.43 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.43 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.43 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.39 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.38 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.37 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.37 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.37 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.34 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.34 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.32 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.32 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.32 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.32 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.31 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.31 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.3 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.28 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.28 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.28 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.27 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.27 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.26 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.26 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.25 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.24 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.24 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.22 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.22 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.21 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.2 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.2 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.2 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.2 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.19 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.19 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.19 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.18 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.18 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.18 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.17 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.14 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.11 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.11 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.1 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.1 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.1 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.09 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.09 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.09 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.09 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.08 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.07 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.07 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.06 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.06 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.05 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.05 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.04 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.04 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.04 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.03 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.02 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.02 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.01 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 98.99 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 98.98 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.97 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.96 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.96 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.96 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.96 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.95 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.95 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.94 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 98.93 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 98.93 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 98.93 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.92 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 98.92 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.92 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 98.9 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.88 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 98.88 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 98.88 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 98.88 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 98.86 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 98.86 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 98.86 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 98.85 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.85 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.85 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.83 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.81 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.79 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 98.79 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 98.79 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.78 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 98.77 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.75 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.71 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.64 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.62 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.62 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.58 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.58 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.57 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.56 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.56 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 98.54 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.54 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.51 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.47 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 98.47 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.46 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.46 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.44 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 98.4 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.39 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.39 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.37 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 98.31 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.3 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.29 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.28 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.24 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.23 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.21 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.21 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.19 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.18 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.18 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.17 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.17 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.17 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 98.14 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 98.11 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 98.11 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 98.1 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 98.08 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 98.08 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.03 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.94 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.88 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.86 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 97.85 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 97.83 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 97.81 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 97.8 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 97.75 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 97.75 | |
| PLN00106 | 323 | malate dehydrogenase | 97.74 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.73 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.72 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 97.7 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.68 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 97.68 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 97.65 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.62 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 97.61 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 97.6 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 97.59 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.59 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 97.59 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 97.58 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 97.57 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.56 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.56 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.56 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.55 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.54 | |
| PRK15182 | 425 | Vi polysaccharide biosynthesis protein TviB; Provi | 97.52 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.52 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 97.51 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 97.49 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 97.47 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.45 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 97.45 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.45 | |
| PRK12491 | 272 | pyrroline-5-carboxylate reductase; Reviewed | 97.43 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.43 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 97.42 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 97.39 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 97.38 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.36 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.36 | |
| PRK08507 | 275 | prephenate dehydrogenase; Validated | 97.36 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 97.36 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 97.35 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.35 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 97.34 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.34 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.32 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.32 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.32 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.29 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 97.29 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 97.28 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 97.28 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.27 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.25 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.25 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.25 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 97.24 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.22 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 97.21 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.21 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.21 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.2 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.19 | |
| PRK07680 | 273 | late competence protein ComER; Validated | 97.18 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.18 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.18 | |
| PLN02256 | 304 | arogenate dehydrogenase | 97.17 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 97.17 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 97.14 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 97.13 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.12 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.1 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 97.09 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.07 | |
| PLN02712 | 667 | arogenate dehydrogenase | 97.07 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 97.05 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.04 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 97.04 | |
| PLN02712 | 667 | arogenate dehydrogenase | 97.03 | |
| PRK15059 | 292 | tartronate semialdehyde reductase; Provisional | 97.03 | |
| KOG0409 | 327 | consensus Predicted dehydrogenase [General functio | 97.02 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 97.02 | |
| PRK06928 | 277 | pyrroline-5-carboxylate reductase; Reviewed | 97.01 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.01 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.97 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.96 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.95 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 96.93 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 96.93 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.92 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.91 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 96.91 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 96.91 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 96.89 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 96.87 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 96.87 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.87 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.86 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.86 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.86 | |
| PRK06249 | 313 | 2-dehydropantoate 2-reductase; Provisional | 96.85 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 96.85 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 96.84 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 96.83 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.83 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 96.83 | |
| COG0677 | 436 | WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas | 96.82 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.81 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 96.78 | |
| PRK06476 | 258 | pyrroline-5-carboxylate reductase; Reviewed | 96.78 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 96.76 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 96.76 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 96.75 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 96.72 | |
| PLN02494 | 477 | adenosylhomocysteinase | 96.72 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.71 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.71 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 96.7 | |
| COG1893 | 307 | ApbA Ketopantoate reductase [Coenzyme metabolism] | 96.7 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 96.68 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 96.66 | |
| TIGR00465 | 314 | ilvC ketol-acid reductoisomerase. This is the seco | 96.64 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.63 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.63 | |
| PRK06545 | 359 | prephenate dehydrogenase; Validated | 96.62 | |
| PRK07634 | 245 | pyrroline-5-carboxylate reductase; Reviewed | 96.61 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.6 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 96.59 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 96.58 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 96.57 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 96.57 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.54 | |
| PRK05691 | 4334 | peptide synthase; Validated | 96.53 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 96.53 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 96.52 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 96.52 | |
| PRK05708 | 305 | 2-dehydropantoate 2-reductase; Provisional | 96.5 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.49 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 96.48 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 96.48 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.48 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.47 | |
| PRK08268 | 507 | 3-hydroxy-acyl-CoA dehydrogenase; Validated | 96.47 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 96.45 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 96.44 | |
| PRK05479 | 330 | ketol-acid reductoisomerase; Provisional | 96.43 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 96.42 | |
| PF00550 | 67 | PP-binding: Phosphopantetheine attachment site; In | 96.41 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.4 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 96.4 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 96.4 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 96.39 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.35 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.32 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.31 | |
| TIGR02279 | 503 | PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa | 96.29 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.29 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 96.24 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 96.23 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.22 | |
| PRK14620 | 326 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.22 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.21 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 96.21 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 96.2 | |
| COG0345 | 266 | ProC Pyrroline-5-carboxylate reductase [Amino acid | 96.19 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.18 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.17 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.16 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.16 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 96.15 | |
| PRK08605 | 332 | D-lactate dehydrogenase; Validated | 96.15 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.11 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 96.1 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 96.1 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 96.09 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 96.09 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.08 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.08 | |
| PF07991 | 165 | IlvN: Acetohydroxy acid isomeroreductase, catalyti | 96.06 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 96.06 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 96.05 | |
| PRK05691 | 4334 | peptide synthase; Validated | 96.02 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.02 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.01 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 96.01 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 95.99 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 95.98 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 95.96 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.94 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 95.93 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 95.93 | |
| PRK12439 | 341 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 95.92 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 95.9 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.89 | |
| TIGR01921 | 324 | DAP-DH diaminopimelate dehydrogenase. This model r | 95.88 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.88 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 95.88 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 95.85 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 95.83 | |
| PRK14806 | 735 | bifunctional cyclohexadienyl dehydrogenase/ 3-phos | 95.81 | |
| PRK13581 | 526 | D-3-phosphoglycerate dehydrogenase; Provisional | 95.8 | |
| PRK01390 | 460 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.79 | |
| PTZ00431 | 260 | pyrroline carboxylate reductase; Provisional | 95.79 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 95.78 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 95.77 | |
| PRK12409 | 410 | D-amino acid dehydrogenase small subunit; Provisio | 95.77 | |
| TIGR00873 | 467 | gnd 6-phosphogluconate dehydrogenase, decarboxylat | 95.75 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 95.74 | |
| PRK13301 | 267 | putative L-aspartate dehydrogenase; Provisional | 95.7 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 95.68 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 95.66 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 95.66 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 95.65 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 95.61 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 95.6 | |
| PRK15409 | 323 | bifunctional glyoxylate/hydroxypyruvate reductase | 95.59 | |
| PRK00421 | 461 | murC UDP-N-acetylmuramate--L-alanine ligase; Provi | 95.58 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 95.57 |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-27 Score=203.03 Aligned_cols=183 Identities=19% Similarity=0.205 Sum_probs=136.8
Q ss_pred CeEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCCc-chhhhhhCCceeeccCc---c------ccCCCCEEEEecCCC
Q 024143 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELINMGITPSLKWT---E------ATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~~-~~~~l~~~~i~~~~~d~---~------~~~~~D~Vi~~a~~~ 153 (272)
|+||||| +||||+|.+.+|++. |++|++++.-.. ....+.....+.+.+|. + .-.++|+|||.|+..
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~--G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~ 78 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT--GHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI 78 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC--CCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccc
Confidence 5899997 699999999999999 999999998433 23333322245555553 1 234899999999975
Q ss_pred CCCC-------h----HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc
Q 024143 154 RSLD-------Y----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF 220 (272)
Q Consensus 154 ~~~~-------~----~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~ 220 (272)
..++ | +.++.+++ +.+.++++|||-||..|||.+...|++|+.|+.|. +|||++|++.|++++.+
T Consensus 79 ~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~--NPYG~sKlm~E~iL~d~ 156 (329)
T COG1087 79 SVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPI--NPYGRSKLMSEEILRDA 156 (329)
T ss_pred ccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCC--CcchhHHHHHHHHHHHH
Confidence 4322 2 22334444 35678999999999999999877899999999998 99999999999999875
Q ss_pred C------eeEEeeCceecCCCc--------------HHHHHHHcCcc-----------cCCCCcccccccHHHHHHHHHH
Q 024143 221 G------GCVLRLAGLYKADRG--------------AHVYWLQKGTV-----------DSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 221 ~------~~IlRp~~iyG~~~~--------------~~~~~l~~g~~-----------~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
. +++||..++-|.... +..-...-|+. -.+|...||||||.|+|++.++
T Consensus 157 ~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~ 236 (329)
T COG1087 157 AKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVL 236 (329)
T ss_pred HHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHH
Confidence 3 799999999886421 11111222321 2467789999999999999999
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
|+
T Consensus 237 Al 238 (329)
T COG1087 237 AL 238 (329)
T ss_pred HH
Confidence 86
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-27 Score=212.93 Aligned_cols=185 Identities=15% Similarity=0.077 Sum_probs=135.0
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh----hhhh-------CCceeeccCc-------cccCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD----ELIN-------MGITPSLKWT-------EATQKF 143 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~----~l~~-------~~i~~~~~d~-------~~~~~~ 143 (272)
.+++|||||+ ||||++|+++|+++ |++|++++|...... .+.. ..+..+.+|. +.++++
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~ 91 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFL--NQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV 91 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence 4589999996 99999999999999 999999998643211 1100 1234445553 246789
Q ss_pred CEEEEecCCCCC----CC-------hHHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHH
Q 024143 144 PYVIFCAPPSRS----LD-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (272)
Q Consensus 144 D~Vi~~a~~~~~----~~-------~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk 210 (272)
|+|||+|+.... .+ ....+.+++. ...++++|||+||.+|||...+.+..|+++..|. ++|+.+|
T Consensus 92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~--~~Y~~sK 169 (348)
T PRK15181 92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPL--SPYAVTK 169 (348)
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCC--ChhhHHH
Confidence 999999985331 11 1233345542 3568999999999999997555677788777776 7999999
Q ss_pred HHHHHHHHHc----C--eeEEeeCceecCCCcH----------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 211 LKAEKVILEF----G--GCVLRLAGLYKADRGA----------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 211 ~~aE~~l~~~----~--~~IlRp~~iyG~~~~~----------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..+|++++.+ + ++++||+++|||+..+ +...+..+++ +++|++.++|||++|+|+++++++
T Consensus 170 ~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~ 249 (348)
T PRK15181 170 YVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSA 249 (348)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHH
Confidence 9999988754 3 8999999999996421 1223444543 367889999999999999988764
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-26 Score=201.11 Aligned_cols=182 Identities=21% Similarity=0.231 Sum_probs=133.7
Q ss_pred EEEcC-cHHHHHHHHHHHhcCCC--CeEEEEecCCcchh--hhhhCCce-eeccCc-------cccCCCCEEEEecCCCC
Q 024143 88 LIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHD--ELINMGIT-PSLKWT-------EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 88 lItGa-GfiG~~l~~~L~~~~~g--~~V~~~~R~~~~~~--~l~~~~i~-~~~~d~-------~~~~~~D~Vi~~a~~~~ 154 (272)
||||+ ||||++|+++|+++ | ++|+++++.+.... .+...+.. .+.+|. ++++++|+|||+|++..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~--g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~ 78 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLER--GYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVP 78 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHC--CCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccc
Confidence 68885 99999999999999 8 79999998764422 23333333 555553 37899999999998643
Q ss_pred C-C-C--------hHHHHHHHHH--HhcCCCeEEEEecceeecCCC-C-C--CCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 024143 155 S-L-D--------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSD-N-G--ACDEDSPVVPIGRSPRTDVLLKAEKVIL 218 (272)
Q Consensus 155 ~-~-~--------~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~-~-~--~~~E~~p~~p~~~~~y~~sk~~aE~~l~ 218 (272)
. . . .++++++++. ...+++||||+||.+|+++.. + . ..+|+.|..+...+.|+++|+.+|++++
T Consensus 79 ~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~ 158 (280)
T PF01073_consen 79 PWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVL 158 (280)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHH
Confidence 2 1 1 2456677762 356899999999999987621 2 2 2367776554445799999999999998
Q ss_pred HcC-----------eeEEeeCceecCCCcHH----HHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 219 EFG-----------GCVLRLAGLYKADRGAH----VYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 219 ~~~-----------~~IlRp~~iyG~~~~~~----~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++. +++|||+.||||+...+ ...+..|.. ++.++...+++||+|+|+++++|+
T Consensus 159 ~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~ 229 (280)
T PF01073_consen 159 EANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAA 229 (280)
T ss_pred hhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHH
Confidence 852 58999999999986432 223444532 467788999999999999999875
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-25 Score=206.29 Aligned_cols=187 Identities=12% Similarity=0.050 Sum_probs=128.3
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhh-------CCceeeccCc-------cccCCCCE
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-------MGITPSLKWT-------EATQKFPY 145 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~-------~~i~~~~~d~-------~~~~~~D~ 145 (272)
..+|||||||+ ||||++|+++|+++ | ++|++++|...+...+.. ..++.+.+|. ++++++|+
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~--~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ 89 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTE--TPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADL 89 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhc--CCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCE
Confidence 34578999996 99999999999997 5 899999987655443321 1355555553 24678999
Q ss_pred EEEecCCCCC----CC----hHH---HHHHHHH-H-hcCCCeEEEEecceeecCCCCCCCCCCCCCCC------------
Q 024143 146 VIFCAPPSRS----LD----YPG---DVRLAAL-S-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP------------ 200 (272)
Q Consensus 146 Vi~~a~~~~~----~~----~~~---~~~~l~~-~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p------------ 200 (272)
|||+|+.... .+ +.. ...+++. + ..+ +||||+||.+|||.....+++|+.|+.+
T Consensus 90 ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~ 168 (386)
T PLN02427 90 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDES 168 (386)
T ss_pred EEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccc
Confidence 9999985321 11 111 1122231 2 334 8999999999998653344455443221
Q ss_pred --------CCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCc-------------HH----HHHHHcCcc--
Q 024143 201 --------IGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG-------------AH----VYWLQKGTV-- 247 (272)
Q Consensus 201 --------~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~-------------~~----~~~l~~g~~-- 247 (272)
...+.|+.+|+.+|++++.+ + ++|+||+++|||+.. .+ ...+.++++
T Consensus 169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 248 (386)
T PLN02427 169 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLK 248 (386)
T ss_pred ccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeE
Confidence 11257999999999999864 3 899999999999732 01 122344543
Q ss_pred -cCCCCcccccccHHHHHHHHHHHh
Q 024143 248 -DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 248 -~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+.+++.++||||+|+|++++.++
T Consensus 249 ~~g~g~~~r~~i~V~Dva~ai~~al 273 (386)
T PLN02427 249 LVDGGQSQRTFVYIKDAIEAVLLMI 273 (386)
T ss_pred EECCCCceECcEeHHHHHHHHHHHH
Confidence 356788899999999999998876
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-25 Score=202.60 Aligned_cols=186 Identities=14% Similarity=0.140 Sum_probs=130.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc--------cccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT--------EATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~--------~~~~~~D~Vi~~a~~~ 153 (272)
||+|||||+ ||||++|+++|+++ .|++|++++|+..+...+.. .+++.+.+|. ++++++|+|||+|+..
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~-~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~ 79 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILET-TDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIA 79 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhC-CCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccC
Confidence 679999997 99999999999985 16999999997654443322 3455555553 1356899999999853
Q ss_pred CC----CC----h---HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCC---CC--CCCChHHHHHHHHHH
Q 024143 154 RS----LD----Y---PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV---VP--IGRSPRTDVLLKAEK 215 (272)
Q Consensus 154 ~~----~~----~---~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~---~p--~~~~~y~~sk~~aE~ 215 (272)
.. .+ + .....+++. ...+ ++|||+||..|||...+.+++|+++. .| .+.+.|+.+|..+|+
T Consensus 80 ~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~ 158 (347)
T PRK11908 80 TPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDR 158 (347)
T ss_pred ChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHH
Confidence 21 11 1 222334442 2344 79999999999987544567766532 11 112689999999999
Q ss_pred HHHHc----C--eeEEeeCceecCCCc--------------HHHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 216 VILEF----G--GCVLRLAGLYKADRG--------------AHVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 216 ~l~~~----~--~~IlRp~~iyG~~~~--------------~~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++.+ + ++++||+++|||+.. .+...+..|++ .+.|++.++|||++|++++++.++
T Consensus 159 ~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~ 237 (347)
T PRK11908 159 VIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKII 237 (347)
T ss_pred HHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHH
Confidence 99764 3 899999999999742 11223445554 356789999999999999998875
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=198.29 Aligned_cols=187 Identities=14% Similarity=0.076 Sum_probs=131.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh-----hhhh--CCceeeccCc-------cccCCCCEE
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----ELIN--MGITPSLKWT-------EATQKFPYV 146 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~-----~l~~--~~i~~~~~d~-------~~~~~~D~V 146 (272)
..+++|||||+ ||||++|+++|+++ |++|++++|+.++.. .+.. ..++.+.+|. ++++++|+|
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 85 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLER--GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGV 85 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEE
Confidence 34678999997 99999999999999 999999999765421 1111 1244444553 256789999
Q ss_pred EEecCCCCCCC------hHHHHHHHH--HHhcCCCeEEEEecc-eeecCCCC---CCCCCCCC------CCCCCCChHHH
Q 024143 147 IFCAPPSRSLD------YPGDVRLAA--LSWNGEGSFLFTSSS-AIYDCSDN---GACDEDSP------VVPIGRSPRTD 208 (272)
Q Consensus 147 i~~a~~~~~~~------~~~~~~~l~--~~~~gvkr~V~~SS~-~vYg~~~~---~~~~E~~p------~~p~~~~~y~~ 208 (272)
||+|++..... ....+.+++ ....+++||||+||. .+||.... .+++|+++ ..|. +.|+.
T Consensus 86 ih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~--~~Y~~ 163 (342)
T PLN02214 86 FHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTK--NWYCY 163 (342)
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccc--cHHHH
Confidence 99998753221 122334444 234578999999996 68975322 35788852 2233 68999
Q ss_pred HHHHHHHHHHHc----C--eeEEeeCceecCCCcH-----H--HHHHHcCcccCCCCcccccccHHHHHHHHHHHhC
Q 024143 209 VLLKAEKVILEF----G--GCVLRLAGLYKADRGA-----H--VYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAST 272 (272)
Q Consensus 209 sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~-----~--~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~~ 272 (272)
+|..+|++++.+ + ++++||+++|||+..+ . ...+..|.....++..++||||+|+|++++++++
T Consensus 164 sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~ 240 (342)
T PLN02214 164 GKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYE 240 (342)
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHh
Confidence 999999998765 3 7999999999997531 1 1123344433335667899999999999998873
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.7e-25 Score=204.98 Aligned_cols=183 Identities=14% Similarity=0.070 Sum_probs=129.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhhhh----hCCceeeccCc--cccCCCCEEEEecCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELI----NMGITPSLKWT--EATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~l~----~~~i~~~~~d~--~~~~~~D~Vi~~a~~~~~ 155 (272)
.|||||||+ ||||++|+++|+++ |++|++++|.... ...+. ...++.+..|. +.+.++|+|||+|+....
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~--G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~D~ViHlAa~~~~ 197 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGR--GDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILLEVDQIYHLACPASP 197 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCccHhHhhhhccCCceEEEECccccccccCCCEEEECceeccc
Confidence 368999996 99999999999999 9999999985321 11111 11344444443 246789999999985331
Q ss_pred ----CC-------hHHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCC-----CCCCCCCChHHHHHHHHHHHH
Q 024143 156 ----LD-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDS-----PVVPIGRSPRTDVLLKAEKVI 217 (272)
Q Consensus 156 ----~~-------~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~-----p~~p~~~~~y~~sk~~aE~~l 217 (272)
.+ .+....+++. ...+ .+|||+||..|||+....+.+|+. |..|. +.|+.+|..+|+++
T Consensus 198 ~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~--s~Yg~SK~~aE~~~ 274 (436)
T PLN02166 198 VHYKYNPVKTIKTNVMGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER--SCYDEGKRTAETLA 274 (436)
T ss_pred hhhccCHHHHHHHHHHHHHHHHHHHHHhC-CEEEEECcHHHhCCCCCCCCCccccccCCCCCCC--CchHHHHHHHHHHH
Confidence 11 1222344442 2345 489999999999976556778874 55454 78999999999998
Q ss_pred HHc----C--eeEEeeCceecCCCc--------HHHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 218 LEF----G--GCVLRLAGLYKADRG--------AHVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 218 ~~~----~--~~IlRp~~iyG~~~~--------~~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+ + ++++||+++|||+.. .+...+.+++. .+++++.++|||++|++++++.++
T Consensus 275 ~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~ 345 (436)
T PLN02166 275 MDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALM 345 (436)
T ss_pred HHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHH
Confidence 765 3 799999999999732 12223444443 367788999999999999998875
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-25 Score=189.79 Aligned_cols=181 Identities=22% Similarity=0.302 Sum_probs=137.3
Q ss_pred EEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc---c----ccC--CCCEEEEecCCCCC
Q 024143 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E----ATQ--KFPYVIFCAPPSRS 155 (272)
Q Consensus 87 IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~---~----~~~--~~D~Vi~~a~~~~~ 155 (272)
|||+|+ ||||++++++|+++ |++|+.+.|.+........ ..++.+..|. + .++ .+|+|||+|+....
T Consensus 1 IlI~GatG~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~ 78 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKK--GHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSN 78 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSH
T ss_pred EEEEccCCHHHHHHHHHHHHc--CCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccc
Confidence 799996 99999999999999 9999999998766533221 2555555443 1 233 56999999997531
Q ss_pred ----CC---h----HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc--
Q 024143 156 ----LD---Y----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-- 220 (272)
Q Consensus 156 ----~~---~----~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-- 220 (272)
.. + .....+++ ....++++|||+||..+|+...+.+++|+++..|. ++|+.+|...|++++++
T Consensus 79 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~--~~Y~~~K~~~e~~~~~~~~ 156 (236)
T PF01370_consen 79 PESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPL--SPYGASKRAAEELLRDYAK 156 (236)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHS--SHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccc
Confidence 01 1 12223333 23457799999999999998766789999988776 89999999999999875
Q ss_pred --C--eeEEeeCceecCC---Cc------HHHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 221 --G--GCVLRLAGLYKAD---RG------AHVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 221 --~--~~IlRp~~iyG~~---~~------~~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+ ++++||+.+|||+ .. .+...+.+|++ ++++++.+++||++|+|++++.++
T Consensus 157 ~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 223 (236)
T PF01370_consen 157 KYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAAL 223 (236)
T ss_dssp HHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHH
Confidence 3 8999999999999 11 23344666763 478899999999999999999886
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-24 Score=202.01 Aligned_cols=188 Identities=12% Similarity=0.064 Sum_probs=127.3
Q ss_pred CCCcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc---c--------------hhhhh------hCCceeec
Q 024143 79 SGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD---H--------------HDELI------NMGITPSL 134 (272)
Q Consensus 79 ~~~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~---~--------------~~~l~------~~~i~~~~ 134 (272)
|....+++|||||+ ||||++|+++|+++ |++|++++|... . ...+. ..+++.+.
T Consensus 42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~ 119 (442)
T PLN02572 42 SSSSKKKKVMVIGGDGYCGWATALHLSKR--GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYV 119 (442)
T ss_pred CccccCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEE
Confidence 44567889999996 99999999999999 999999875211 0 00110 12355555
Q ss_pred cCc---c----ccC--CCCEEEEecCCCCCC-------C--h-----HHHHHHHHH--HhcCCC-eEEEEecceeecCCC
Q 024143 135 KWT---E----ATQ--KFPYVIFCAPPSRSL-------D--Y-----PGDVRLAAL--SWNGEG-SFLFTSSSAIYDCSD 188 (272)
Q Consensus 135 ~d~---~----~~~--~~D~Vi~~a~~~~~~-------~--~-----~~~~~~l~~--~~~gvk-r~V~~SS~~vYg~~~ 188 (272)
+|. + +++ ++|+|||+|+..... + + ...+.+++. ...+++ +|||+||..|||...
T Consensus 120 ~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~ 199 (442)
T PLN02572 120 GDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN 199 (442)
T ss_pred CCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC
Confidence 553 1 233 589999999653211 0 0 112223331 245675 999999999998642
Q ss_pred CCCCCC-----------CC---CCCCCCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH-----------
Q 024143 189 NGACDE-----------DS---PVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA----------- 237 (272)
Q Consensus 189 ~~~~~E-----------~~---p~~p~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~----------- 237 (272)
.+++| ++ |..|. ++|+.+|.++|.+++.+ + ++++||+++|||+...
T Consensus 200 -~~~~E~~i~~~~~~~e~~~~~~~~P~--s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~ 276 (442)
T PLN02572 200 -IDIEEGYITITHNGRTDTLPYPKQAS--SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRL 276 (442)
T ss_pred -CCCcccccccccccccccccCCCCCC--CcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCccccccccccccc
Confidence 22322 22 44454 79999999999988765 3 7999999999997421
Q ss_pred ------------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 238 ------------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 238 ------------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+...+.+|++ +++|++.++||||+|+|++++.++
T Consensus 277 ~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al 325 (442)
T PLN02572 277 DYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAI 325 (442)
T ss_pred CcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHH
Confidence 1122344553 467899999999999999998876
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.2e-24 Score=195.42 Aligned_cols=184 Identities=15% Similarity=0.081 Sum_probs=128.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~ 155 (272)
.|+|||||+ ||||++|++.|.++ ||+|++++|.......-.....+...+|. ..+.++|+|||+|+....
T Consensus 21 ~~~IlVtGgtGfIG~~l~~~L~~~--G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~ 98 (370)
T PLN02695 21 KLRICITGAGGFIASHIARRLKAE--GHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGG 98 (370)
T ss_pred CCEEEEECCccHHHHHHHHHHHhC--CCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEcccccCC
Confidence 478999996 99999999999999 99999999864321110011234444453 135689999999975321
Q ss_pred -----CC----h---HHHHHHHHH--HhcCCCeEEEEecceeecCCCC----CCCCCCC--CCCCCCCChHHHHHHHHHH
Q 024143 156 -----LD----Y---PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDN----GACDEDS--PVVPIGRSPRTDVLLKAEK 215 (272)
Q Consensus 156 -----~~----~---~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~----~~~~E~~--p~~p~~~~~y~~sk~~aE~ 215 (272)
.+ + .....+++. ...++++|||+||..+|+.... .+++|++ |..|. +.|+.+|..+|+
T Consensus 99 ~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~--s~Yg~sK~~~E~ 176 (370)
T PLN02695 99 MGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ--DAYGLEKLATEE 176 (370)
T ss_pred ccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCC--CHHHHHHHHHHH
Confidence 11 1 122334442 3567999999999999986422 2466665 55665 899999999999
Q ss_pred HHHHc----C--eeEEeeCceecCCCc----------HHHHHHHc-Ccc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 216 VILEF----G--GCVLRLAGLYKADRG----------AHVYWLQK-GTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 216 ~l~~~----~--~~IlRp~~iyG~~~~----------~~~~~l~~-g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++.+ + ++++||+++|||+.. .+...+.+ +.. ++++++.++|||++|++++++.++
T Consensus 177 ~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~ 252 (370)
T PLN02695 177 LCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLT 252 (370)
T ss_pred HHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHH
Confidence 88764 3 799999999999642 12222333 222 477889999999999999998764
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-24 Score=210.22 Aligned_cols=187 Identities=16% Similarity=0.161 Sum_probs=132.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc--------cccCCCCEEEEecCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT--------EATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~--------~~~~~~D~Vi~~a~~ 152 (272)
++|+|||||+ ||||++|+++|+++ .||+|++++|.+.....+.. .+++.+.+|. ++++++|+|||+|+.
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~ 392 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRD-DNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAI 392 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhC-CCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccc
Confidence 5689999996 99999999999984 16999999997654332221 2455555553 135789999999985
Q ss_pred CCCCC--------h---HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCC---CCC--CCChHHHHHHHHH
Q 024143 153 SRSLD--------Y---PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV---VPI--GRSPRTDVLLKAE 214 (272)
Q Consensus 153 ~~~~~--------~---~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~---~p~--~~~~y~~sk~~aE 214 (272)
..... + .....+++. ...+ ++|||+||.++||...+.+++|+++. .|. +.+.|+.+|+.+|
T Consensus 393 ~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E 471 (660)
T PRK08125 393 ATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLD 471 (660)
T ss_pred cCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHH
Confidence 43211 1 122233331 2345 89999999999997545678888753 221 1258999999999
Q ss_pred HHHHHc----C--eeEEeeCceecCCCcH--------------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 215 KVILEF----G--GCVLRLAGLYKADRGA--------------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 215 ~~l~~~----~--~~IlRp~~iyG~~~~~--------------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++++.+ + .+++||+++|||+... +...+..+++ .+++++.++|||++|+|+++++++
T Consensus 472 ~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l 551 (660)
T PRK08125 472 RVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRII 551 (660)
T ss_pred HHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHH
Confidence 999764 3 7999999999997421 1223444543 367889999999999999998875
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-24 Score=198.93 Aligned_cols=183 Identities=13% Similarity=0.045 Sum_probs=127.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhh----hhhCCceeeccCc--cccCCCCEEEEecCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINMGITPSLKWT--EATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~----l~~~~i~~~~~d~--~~~~~~D~Vi~~a~~~~~ 155 (272)
.|||||||+ ||||++|+++|+++ |++|++++|.... .+. +...+++....|. +.+.++|+|||+|+....
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll~~--G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~l~~~D~ViHlAa~~~~ 196 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLMAR--GDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPILLEVDQIYHLACPASP 196 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHHHC--cCEEEEEeCCCccchhhhhhhccCCceEEEECCccChhhcCCCEEEEeeeecch
Confidence 368999996 99999999999999 9999999875321 111 1112344444442 345689999999985321
Q ss_pred C----C-------hHHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCC-----CCCCCCCChHHHHHHHHHHHH
Q 024143 156 L----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDS-----PVVPIGRSPRTDVLLKAEKVI 217 (272)
Q Consensus 156 ~----~-------~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~-----p~~p~~~~~y~~sk~~aE~~l 217 (272)
. + .+....+++. ...++ +|||+||..||+.....+.+|+. |..+. +.|+.+|.++|+++
T Consensus 197 ~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~--s~Y~~SK~~aE~~~ 273 (442)
T PLN02206 197 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVR--SCYDEGKRTAETLT 273 (442)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCcc--chHHHHHHHHHHHH
Confidence 1 1 1122334442 23454 89999999999875555677764 33333 78999999999998
Q ss_pred HHc----C--eeEEeeCceecCCCc----H----HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 218 LEF----G--GCVLRLAGLYKADRG----A----HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 218 ~~~----~--~~IlRp~~iyG~~~~----~----~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+ + ++++||+++|||+.. . +...+..++. ++++++.++|+|++|+|++++.++
T Consensus 274 ~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~ 344 (442)
T PLN02206 274 MDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 344 (442)
T ss_pred HHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHH
Confidence 764 3 799999999999731 1 1222334433 467888999999999999998875
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.6e-24 Score=183.60 Aligned_cols=185 Identities=14% Similarity=0.095 Sum_probs=136.9
Q ss_pred CeEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecC-----Ccchhhhhh-CCceeeccCc---c----ccC--CCCEEEE
Q 024143 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMT-----ADHHDELIN-MGITPSLKWT---E----ATQ--KFPYVIF 148 (272)
Q Consensus 85 ~~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~-----~~~~~~l~~-~~i~~~~~d~---~----~~~--~~D~Vi~ 148 (272)
|++|||| |||||+++++.++++++..+|+.++.= .+.+..+.. .....+.+|. + .++ ++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 5799997 699999999999999888889988762 222323322 2344555543 2 344 6999999
Q ss_pred ecCCCCCCC-------hHH----HHHHHHH--HhcCC-CeEEEEecceeecCCC--CCCCCCCCCCCCCCCChHHHHHHH
Q 024143 149 CAPPSRSLD-------YPG----DVRLAAL--SWNGE-GSFLFTSSSAIYDCSD--NGACDEDSPVVPIGRSPRTDVLLK 212 (272)
Q Consensus 149 ~a~~~~~~~-------~~~----~~~~l~~--~~~gv-kr~V~~SS~~vYg~~~--~~~~~E~~p~~p~~~~~y~~sk~~ 212 (272)
.|+.++.+. |.+ ++-+++. .+... .||+++||..|||+-. +..++|.+|+.|. +||+.||+.
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~Ps--SPYSASKAa 158 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPS--SPYSASKAA 158 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCC--CCcchhhhh
Confidence 999765321 322 2234442 22233 5999999999999853 3479999999998 999999999
Q ss_pred HHHHHHHc----C--eeEEeeCceecCCCcH------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 213 AEKVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 213 aE~~l~~~----~--~~IlRp~~iyG~~~~~------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+..+++.+ | ++|.|+++-|||.+.+ ...++..|++ .|+|.+.++|+||+|-|+++...+
T Consensus 159 sD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl 232 (340)
T COG1088 159 SDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVL 232 (340)
T ss_pred HHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHH
Confidence 99999886 3 7999999999998753 1223455654 389999999999999999998776
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-23 Score=187.57 Aligned_cols=173 Identities=12% Similarity=0.124 Sum_probs=121.8
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc----cccC--CCCEEEEecCCCCCC-
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRSL- 156 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~----~~~~--~~D~Vi~~a~~~~~~- 156 (272)
|||||||+ ||||++|+++|+++ | +|++++|..... .....|. +.++ ++|+|||||+.....
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~--g-~V~~~~~~~~~~--------~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~ 69 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPL--G-NLIALDVHSTDY--------CGDFSNPEGVAETVRKIRPDVIVNAAAHTAVDK 69 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhcc--C-CEEEeccccccc--------cCCCCCHHHHHHHHHhcCCCEEEECCccCCcch
Confidence 48999996 99999999999999 8 799998853211 1111222 1233 689999999875422
Q ss_pred ---C-------hHHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--e
Q 024143 157 ---D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--G 222 (272)
Q Consensus 157 ---~-------~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~ 222 (272)
+ ......+++. ...+ .+|||+||..|||.....+++|+++..|. ++||++|+++|++++.+. +
T Consensus 70 ~~~~~~~~~~~N~~~~~~l~~aa~~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~--~~Yg~sK~~~E~~~~~~~~~~ 146 (299)
T PRK09987 70 AESEPEFAQLLNATSVEAIAKAANEVG-AWVVHYSTDYVFPGTGDIPWQETDATAPL--NVYGETKLAGEKALQEHCAKH 146 (299)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHcC-CeEEEEccceEECCCCCCCcCCCCCCCCC--CHHHHHHHHHHHHHHHhCCCE
Confidence 1 1222334442 2345 47999999999987655689999998887 899999999999998875 8
Q ss_pred eEEeeCceecCCCcHHH----HHHHcCcc---cCC--CCcccccccHHHHHHHHHHHh
Q 024143 223 CVLRLAGLYKADRGAHV----YWLQKGTV---DSR--PDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 223 ~IlRp~~iyG~~~~~~~----~~l~~g~~---~~~--~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+|+|++++|||+...+. ..+.+++. .++ +.....+.+++|+++++..++
T Consensus 147 ~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~ 204 (299)
T PRK09987 147 LIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVAL 204 (299)
T ss_pred EEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhh
Confidence 99999999999753322 23344543 233 455556677788888877653
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-23 Score=186.94 Aligned_cols=181 Identities=22% Similarity=0.238 Sum_probs=131.7
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCC-CEEEEecCCCCCC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKF-PYVIFCAPPSRSL 156 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~-D~Vi~~a~~~~~~ 156 (272)
+|||||+ ||||++|+++|+++ ||+|++++|...+..... .+++.+..|. +...++ |+|||+|+.....
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~ 78 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAA--GHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVP 78 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhC--CCeEEEEeCCCccccccc-cccceeeecccchHHHHHHHhcCCCEEEEccccCchh
Confidence 4999996 99999999999999 999999999876654332 2333333331 134555 9999999864311
Q ss_pred C------------hHHHHHHHHH-H-hcCCCeEEEEecceeecCC-CCCCCCCC-CCCCCCCCChHHHHHHHHHHHHHHc
Q 024143 157 D------------YPGDVRLAAL-S-WNGEGSFLFTSSSAIYDCS-DNGACDED-SPVVPIGRSPRTDVLLKAEKVILEF 220 (272)
Q Consensus 157 ~------------~~~~~~~l~~-~-~~gvkr~V~~SS~~vYg~~-~~~~~~E~-~p~~p~~~~~y~~sk~~aE~~l~~~ 220 (272)
. ....+.+++. + ..++++|||.||.++|+.. .+.+++|+ .+..|. ++|+.+|+++|+.++++
T Consensus 79 ~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~--~~Yg~sK~~~E~~~~~~ 156 (314)
T COG0451 79 DSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPL--NPYGVSKLAAEQLLRAY 156 (314)
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCC--CHHHHHHHHHHHHHHHH
Confidence 0 1233444542 2 3589999998888888754 33478998 677776 59999999999999875
Q ss_pred C------eeEEeeCceecCCCcH-----HH----HHHHcCcc-c---CCCCcccccccHHHHHHHHHHHh
Q 024143 221 G------GCVLRLAGLYKADRGA-----HV----YWLQKGTV-D---SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 221 ~------~~IlRp~~iyG~~~~~-----~~----~~l~~g~~-~---~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
. ++++||+++|||+... +. .++.++.+ . ++++..++++|++|++++++.++
T Consensus 157 ~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 226 (314)
T COG0451 157 ARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL 226 (314)
T ss_pred HHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHH
Confidence 3 8999999999998542 11 12455543 2 45677889999999999999876
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-23 Score=192.21 Aligned_cols=178 Identities=21% Similarity=0.207 Sum_probs=134.5
Q ss_pred CcCCCeEEEE----cC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh-----------hhhhCCceeeccCcc----c-
Q 024143 81 GVGENDLLIV----GP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----------ELINMGITPSLKWTE----A- 139 (272)
Q Consensus 81 ~~~~~~IlIt----Ga-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~-----------~l~~~~i~~~~~d~~----~- 139 (272)
..++++|||| |+ ||||++|+++|+++ ||+|++++|++.... .+...+++.+.+|.. .
T Consensus 49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~ 126 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKA--GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV 126 (378)
T ss_pred ccccceEEEEeccCCCceeEhHHHHHHHHHC--CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh
Confidence 3456899999 96 99999999999999 999999999865422 222345666666641 2
Q ss_pred -cCCCCEEEEecCCCCCCChHHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024143 140 -TQKFPYVIFCAPPSRSLDYPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKV 216 (272)
Q Consensus 140 -~~~~D~Vi~~a~~~~~~~~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~ 216 (272)
..++|+|||+++.. ....++++. ...|+++|||+||.++|+.....+..|+++..|. + +|+++|++
T Consensus 127 ~~~~~d~Vi~~~~~~-----~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~--~----sK~~~E~~ 195 (378)
T PLN00016 127 AGAGFDVVYDNNGKD-----LDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPK--A----GHLEVEAY 195 (378)
T ss_pred ccCCccEEEeCCCCC-----HHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCc--c----hHHHHHHH
Confidence 24799999997642 233445442 3468999999999999997655678888877664 2 79999999
Q ss_pred HHHcC--eeEEeeCceecCCCc-----HHHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 217 ILEFG--GCVLRLAGLYKADRG-----AHVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 217 l~~~~--~~IlRp~~iyG~~~~-----~~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++.+ ++++||+++||++.. .+..++..+.+ ++.+++.++++|++|+|++++.++
T Consensus 196 l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l 260 (378)
T PLN00016 196 LQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVV 260 (378)
T ss_pred HHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHh
Confidence 98877 899999999999643 12234555553 356788999999999999998876
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-23 Score=189.74 Aligned_cols=183 Identities=17% Similarity=0.106 Sum_probs=130.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-----hhhhh-------hCCceeeccCc---c----ccC--C
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI-------NMGITPSLKWT---E----ATQ--K 142 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-----~~~l~-------~~~i~~~~~d~---~----~~~--~ 142 (272)
++|||||+ ||||++|+++|+++ |++|++++|.+.. ...+. ..+++.+.+|. + +++ +
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK--GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC--CCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 48999996 99999999999999 9999999997542 11111 12345555553 1 333 5
Q ss_pred CCEEEEecCCCCCC----C--h-----HHHHHHHHH--HhcCC---CeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 143 FPYVIFCAPPSRSL----D--Y-----PGDVRLAAL--SWNGE---GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~----~--~-----~~~~~~l~~--~~~gv---kr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
+|+|||+|+..... . + .....+++. ...++ ++|||+||..|||.....+++|+.|+.|. ++|
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y 156 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPR--SPY 156 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCC--Chh
Confidence 79999999964321 1 1 112233332 23354 38999999999997555578999988887 899
Q ss_pred HHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH------H---HHHHHcCcc----cCCCCcccccccHHHHHHHH
Q 024143 207 TDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------H---VYWLQKGTV----DSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 207 ~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~------~---~~~l~~g~~----~~~~~~~~~~I~v~Dva~ai 267 (272)
+.+|.++|.+++.+ + .++.|+.++|||+... + ...+..|+. +++|++.++||||+|+|+++
T Consensus 157 ~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~ 236 (343)
T TIGR01472 157 AAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAM 236 (343)
T ss_pred HHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHH
Confidence 99999999998764 3 6778999999986321 1 112444542 36788999999999999999
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
++++
T Consensus 237 ~~~~ 240 (343)
T TIGR01472 237 WLML 240 (343)
T ss_pred HHHH
Confidence 8876
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-23 Score=186.88 Aligned_cols=186 Identities=14% Similarity=0.081 Sum_probs=125.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh------hhC-CceeeccCc-------cccCCCCEE
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL------INM-GITPSLKWT-------EATQKFPYV 146 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l------~~~-~i~~~~~d~-------~~~~~~D~V 146 (272)
+.+++|||||+ ||||++|+++|+++ |++|+++.|+......+ ... .++.+.+|. +.++++|+|
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 84 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQK--GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLV 84 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHC--CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEE
Confidence 44689999996 99999999999999 99999999876543221 111 245555553 245789999
Q ss_pred EEecCCCCC--CC----h----HHHHHHHHH--Hh-cCCCeEEEEecceeecCCC----CCCCCCCC---------CCCC
Q 024143 147 IFCAPPSRS--LD----Y----PGDVRLAAL--SW-NGEGSFLFTSSSAIYDCSD----NGACDEDS---------PVVP 200 (272)
Q Consensus 147 i~~a~~~~~--~~----~----~~~~~~l~~--~~-~gvkr~V~~SS~~vYg~~~----~~~~~E~~---------p~~p 200 (272)
||+|+.... .+ + ...+.+++. .. .++++|||+||..+|+... +.+++|+. +..|
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p 164 (338)
T PLN00198 85 FHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP 164 (338)
T ss_pred EEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence 999986321 11 1 122233332 23 3589999999999998431 23455652 2224
Q ss_pred CCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH-------HHHHHHcCccc---C-CCC----ccccccc
Q 024143 201 IGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA-------HVYWLQKGTVD---S-RPD----HILNLIH 259 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~-------~~~~l~~g~~~---~-~~~----~~~~~I~ 259 (272)
. ++|+.+|..+|++++.+ + ++++||+++|||+... ....+..++.+ + .+. ..++|||
T Consensus 165 ~--~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 242 (338)
T PLN00198 165 T--WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITH 242 (338)
T ss_pred c--chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeE
Confidence 3 78999999999988764 3 7899999999997421 11123344331 2 222 2479999
Q ss_pred HHHHHHHHHHHh
Q 024143 260 YEVNTLVLFIAS 271 (272)
Q Consensus 260 v~Dva~ai~~a~ 271 (272)
|+|+|+++++++
T Consensus 243 V~D~a~a~~~~~ 254 (338)
T PLN00198 243 VEDVCRAHIFLA 254 (338)
T ss_pred HHHHHHHHHHHh
Confidence 999999998876
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-23 Score=189.84 Aligned_cols=184 Identities=13% Similarity=0.083 Sum_probs=127.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE-ecCCcc--hhhhhh----CCceeeccCc---c----ccC--CCCEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADH--HDELIN----MGITPSLKWT---E----ATQ--KFPYV 146 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~-~R~~~~--~~~l~~----~~i~~~~~d~---~----~~~--~~D~V 146 (272)
|++|||||+ ||||++++++|+++ |++|+++ +|.... ...+.. ..++.+..|. + .++ ++|+|
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V 78 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINE--TSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV 78 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHc--CCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence 679999996 99999999999999 9886644 443221 111111 1234444443 1 233 48999
Q ss_pred EEecCCCCCC----C---h----HHHHHHHHH-H-h---------cCCCeEEEEecceeecCCC--CCCCCCCCCCCCCC
Q 024143 147 IFCAPPSRSL----D---Y----PGDVRLAAL-S-W---------NGEGSFLFTSSSAIYDCSD--NGACDEDSPVVPIG 202 (272)
Q Consensus 147 i~~a~~~~~~----~---~----~~~~~~l~~-~-~---------~gvkr~V~~SS~~vYg~~~--~~~~~E~~p~~p~~ 202 (272)
||||+..... + + .....+++. + . .++++|||+||..+|+... ..+++|+.+..|.
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~- 157 (355)
T PRK10217 79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPS- 157 (355)
T ss_pred EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCC-
Confidence 9999864321 1 1 122223331 1 1 3578999999999998532 3478999888776
Q ss_pred CChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH------HHHHHHcCcc---cCCCCcccccccHHHHHHHH
Q 024143 203 RSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai 267 (272)
+.|+.+|.++|.+++.+ + ++++||+++|||+..+ +...+.++.+ ++++++.++|||++|+|+++
T Consensus 158 -s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~ 236 (355)
T PRK10217 158 -SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARAL 236 (355)
T ss_pred -ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHH
Confidence 89999999999988764 3 7999999999998631 1223344543 37789999999999999999
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 237 ~~~~ 240 (355)
T PRK10217 237 YCVA 240 (355)
T ss_pred HHHH
Confidence 8875
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-23 Score=185.84 Aligned_cols=184 Identities=14% Similarity=0.037 Sum_probs=127.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh---hhhh-----CCceeeccCc-------cccCCCCEEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---ELIN-----MGITPSLKWT-------EATQKFPYVIF 148 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~---~l~~-----~~i~~~~~d~-------~~~~~~D~Vi~ 148 (272)
++|||||+ ||||++|+++|+++ |++|++++|+..... .+.. ..++.+.+|. ++++++|+|||
T Consensus 5 ~~ilVtGatGfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 5 KVVCVTGASGYIASWLVKLLLQR--GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CEEEEECChHHHHHHHHHHHHHC--CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 68999996 99999999999999 999999999765422 1111 1344454443 24678999999
Q ss_pred ecCCCCC--C----Ch----HHHHHHHHH--Hhc-CCCeEEEEecce--eecCC---CCCCCCCCCCCCCCC----CChH
Q 024143 149 CAPPSRS--L----DY----PGDVRLAAL--SWN-GEGSFLFTSSSA--IYDCS---DNGACDEDSPVVPIG----RSPR 206 (272)
Q Consensus 149 ~a~~~~~--~----~~----~~~~~~l~~--~~~-gvkr~V~~SS~~--vYg~~---~~~~~~E~~p~~p~~----~~~y 206 (272)
+|++... . ++ +....+++. ... +++||||+||.+ +|+.. .+.+++|+.+..|.. .+.|
T Consensus 83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 162 (322)
T PLN02662 83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWY 162 (322)
T ss_pred eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchH
Confidence 9986321 1 11 222334442 233 789999999986 47532 234688887765521 2579
Q ss_pred HHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH-------HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 207 TDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA-------HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 207 ~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~-------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|..+|++++.+ + ++++||+++|||+..+ ....+..|+. ..+++.++|||++|+|+++++++
T Consensus 163 ~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~a~~~~~ 239 (322)
T PLN02662 163 VLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANAHIQAF 239 (322)
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cCCCCCcCeEEHHHHHHHHHHHh
Confidence 99999999988653 3 7999999999997432 1112333433 23467899999999999999876
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-24 Score=225.38 Aligned_cols=270 Identities=14% Similarity=0.132 Sum_probs=174.0
Q ss_pred cceeeecccCccccc---ccccccCCcchhhhcc-ccccccc--cccccceeccccccccccccccccccc---------
Q 024143 2 GTISCTNTVSLNGAC---TRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNFQVTASSS--------- 66 (272)
Q Consensus 2 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 66 (272)
..+|+.+++.-..+. ++||++||||++|-|+ -.+++++ +++...+|..++...++..+.......
T Consensus 854 ~~~~~~vl~~~~~~i~~~~~ff~lGgdSL~a~~l~~~l~~~~~~~l~~~~i~~~~ti~~la~~l~~~~~~~~~~~~~~~~ 933 (1389)
T TIGR03443 854 RDLWLELLPNRPATISPDDSFFDLGGHSILATRMIFELRKKLNVELPLGLIFKSPTIKGFAKEVDRLKKGEELADEGDSE 933 (1389)
T ss_pred HHHHHHHhCCCccccCcCcchhhcCccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhhhcccccccccccc
Confidence 468998886422222 8999999999999999 8899987 888899999999998877543211100
Q ss_pred -----------cCCChhh----hccCCC-----CCcCCCeEEEEcC-cHHHHHHHHHHHhcC--CCCeEEEEecCCcchh
Q 024143 67 -----------IGAVKEE----QKGASS-----GGVGENDLLIVGP-GVLGRLVAEQWRQEH--PGCQIYGQTMTADHHD 123 (272)
Q Consensus 67 -----------~~~~~~~----~~~~~~-----~~~~~~~IlItGa-GfiG~~l~~~L~~~~--~g~~V~~~~R~~~~~~ 123 (272)
+..+... +....+ .....++|+|||+ ||||++++++|+++. ..++|+++.|......
T Consensus 934 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~ 1013 (1389)
T TIGR03443 934 IEEEETVLELDYAKDAKTLVDSLPKSYPSRKELDASTPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEA 1013 (1389)
T ss_pred cchhcccccchhhhhhhhhhhcccccCCcccccccCCCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHH
Confidence 0000000 000000 0113468999997 999999999999881 1289999999754332
Q ss_pred h---hhh-------------CCceeeccCc-------------cccCCCCEEEEecCCCCCCC--------hHHHHHHHH
Q 024143 124 E---LIN-------------MGITPSLKWT-------------EATQKFPYVIFCAPPSRSLD--------YPGDVRLAA 166 (272)
Q Consensus 124 ~---l~~-------------~~i~~~~~d~-------------~~~~~~D~Vi~~a~~~~~~~--------~~~~~~~l~ 166 (272)
. +.. ..++.+.+|. +...++|+|||+|+...... .+.++.+++
T Consensus 1014 ~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll 1093 (1389)
T TIGR03443 1014 GLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVL 1093 (1389)
T ss_pred HHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHH
Confidence 1 110 1344444442 12458999999999754221 122334444
Q ss_pred --HHhcCCCeEEEEecceeecCCC------------CCCCCCCCCCCCC---CCChHHHHHHHHHHHHHHc---C--eeE
Q 024143 167 --LSWNGEGSFLFTSSSAIYDCSD------------NGACDEDSPVVPI---GRSPRTDVLLKAEKVILEF---G--GCV 224 (272)
Q Consensus 167 --~~~~gvkr~V~~SS~~vYg~~~------------~~~~~E~~p~~p~---~~~~y~~sk~~aE~~l~~~---~--~~I 224 (272)
....++++|+|+||.++|+... ...+.|+.+..+. ..++|+++|+.+|+++.++ + ++|
T Consensus 1094 ~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i 1173 (1389)
T TIGR03443 1094 NLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCI 1173 (1389)
T ss_pred HHHHhCCCceEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEE
Confidence 2345688999999999996311 1234454432211 1267999999999999875 3 799
Q ss_pred EeeCceecCCCc------HHHHHHHcCc----ccCCCCcccccccHHHHHHHHHHHh
Q 024143 225 LRLAGLYKADRG------AHVYWLQKGT----VDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 225 lRp~~iyG~~~~------~~~~~l~~g~----~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+||+.|||+... .+...+.++. ........+++++|+|+|++++.++
T Consensus 1174 ~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~ 1230 (1389)
T TIGR03443 1174 VRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAA 1230 (1389)
T ss_pred ECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHH
Confidence 999999998632 1122222222 1234556789999999999998764
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-23 Score=185.96 Aligned_cols=179 Identities=13% Similarity=0.109 Sum_probs=121.2
Q ss_pred EEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh---hhhhCCceeeccCc-----ccc-----CCCCEEEEecCC
Q 024143 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---ELINMGITPSLKWT-----EAT-----QKFPYVIFCAPP 152 (272)
Q Consensus 87 IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~---~l~~~~i~~~~~d~-----~~~-----~~~D~Vi~~a~~ 152 (272)
|||||+ ||||++|+++|+++ |++|+++.|+..... .+....+... .+. ..+ .++|+|||||+.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~d~Vih~A~~ 78 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLVDLDIADY-MDKEDFLAQIMAGDDFGDIEAIFHEGAC 78 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhC--CCceEEEecCCCcchHHHhhhhhhhhhh-hhHHHHHHHHhcccccCCccEEEECcee
Confidence 799996 99999999999999 998777766533211 1111111100 010 111 379999999974
Q ss_pred CCCC--C---h----HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-
Q 024143 153 SRSL--D---Y----PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF- 220 (272)
Q Consensus 153 ~~~~--~---~----~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~- 220 (272)
.... + + ...+.+++. ...++ +|||+||.+||++....+++|+++..|. ++|+.+|..+|++++++
T Consensus 79 ~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~ 155 (308)
T PRK11150 79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPL--NVYGYSKFLFDEYVRQIL 155 (308)
T ss_pred cCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCC--CHHHHHHHHHHHHHHHHH
Confidence 2211 1 1 122233431 23455 6999999999997544578888887786 79999999999988875
Q ss_pred ---C--eeEEeeCceecCCCcH------H----HHHHHcCcc---c-CCCCcccccccHHHHHHHHHHHh
Q 024143 221 ---G--GCVLRLAGLYKADRGA------H----VYWLQKGTV---D-SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 221 ---~--~~IlRp~~iyG~~~~~------~----~~~l~~g~~---~-~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+ .+++||+++|||+... . ...+.+|.. . +.++..++|+|++|+|++++.++
T Consensus 156 ~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~ 225 (308)
T PRK11150 156 PEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFW 225 (308)
T ss_pred HHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHH
Confidence 2 7999999999997421 1 123455542 2 44567899999999999988765
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.8e-23 Score=202.72 Aligned_cols=188 Identities=15% Similarity=0.197 Sum_probs=133.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC--cchhhhh----hCCceeeccCc---c----c--cCCCCE
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA--DHHDELI----NMGITPSLKWT---E----A--TQKFPY 145 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~--~~~~~l~----~~~i~~~~~d~---~----~--~~~~D~ 145 (272)
+.+|+|||||+ ||||++|+++|+++.++++|++++|.. .....+. ..+++.+.+|. + . ..++|+
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 83 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT 83 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence 45689999996 999999999999874468999998753 1222221 12455555553 1 1 258999
Q ss_pred EEEecCCCCCC----C---h----HHHHHHHHH--HhcC-CCeEEEEecceeecCCCCCC---CCCCCCCCCCCCChHHH
Q 024143 146 VIFCAPPSRSL----D---Y----PGDVRLAAL--SWNG-EGSFLFTSSSAIYDCSDNGA---CDEDSPVVPIGRSPRTD 208 (272)
Q Consensus 146 Vi~~a~~~~~~----~---~----~~~~~~l~~--~~~g-vkr~V~~SS~~vYg~~~~~~---~~E~~p~~p~~~~~y~~ 208 (272)
|||+|+..... + + ...+.+++. ...+ ++||||+||..|||.....+ .+|+++..|. ++|+.
T Consensus 84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~--~~Y~~ 161 (668)
T PLN02260 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPT--NPYSA 161 (668)
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCC--CCcHH
Confidence 99999975421 1 1 122334442 2345 89999999999998754322 3677777776 79999
Q ss_pred HHHHHHHHHHHc----C--eeEEeeCceecCCCcH------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 209 VLLKAEKVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 209 sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+|+.+|++++++ + ++|+||+++|||+... +...+.++++ .+++++.++|||++|+|++++.++
T Consensus 162 sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l 239 (668)
T PLN02260 162 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL 239 (668)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHH
Confidence 999999999764 3 7999999999998531 1223344543 367888999999999999998775
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=185.84 Aligned_cols=184 Identities=16% Similarity=0.117 Sum_probs=129.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh---h--CCceeeccCc---c----ccC--CCCEEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---N--MGITPSLKWT---E----ATQ--KFPYVIF 148 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~---~--~~i~~~~~d~---~----~~~--~~D~Vi~ 148 (272)
.++|||||+ ||||++++++|+++ |++|++++|++....... . ..+..+.+|. + .++ ++|+|||
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLEL--GAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHC--CCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 368999996 99999999999999 999999999765432211 1 1233444443 1 233 5799999
Q ss_pred ecCCCCCC----Ch-------HHHHHHHHH--HhcC-CCeEEEEecceeecCCC-CCCCCCCCCCCCCCCChHHHHHHHH
Q 024143 149 CAPPSRSL----DY-------PGDVRLAAL--SWNG-EGSFLFTSSSAIYDCSD-NGACDEDSPVVPIGRSPRTDVLLKA 213 (272)
Q Consensus 149 ~a~~~~~~----~~-------~~~~~~l~~--~~~g-vkr~V~~SS~~vYg~~~-~~~~~E~~p~~p~~~~~y~~sk~~a 213 (272)
+|+..... +. .....+++. ...+ +++|||+||..+|+... ..+++|+++..|. ++|+.+|..+
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~--~~Y~~sK~~~ 159 (349)
T TIGR02622 82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGH--DPYSSSKACA 159 (349)
T ss_pred CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCC--CcchhHHHHH
Confidence 99853221 11 111222221 2334 78999999999998643 2468888887776 7999999999
Q ss_pred HHHHHHc-----------C--eeEEeeCceecCCCc---H----HHHHHHcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 214 EKVILEF-----------G--GCVLRLAGLYKADRG---A----HVYWLQKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 214 E~~l~~~-----------~--~~IlRp~~iyG~~~~---~----~~~~l~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|.+++.+ + ++++||+++|||+.. . +...+.+|+. ++.+++.++|||++|+|++++.++
T Consensus 160 e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~ 239 (349)
T TIGR02622 160 ELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLLA 239 (349)
T ss_pred HHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHHH
Confidence 9988653 4 789999999999741 1 1223445554 467889999999999999988754
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-23 Score=186.94 Aligned_cols=175 Identities=18% Similarity=0.219 Sum_probs=113.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccc--cCCCCEEEEecCCCCCCC----
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEA--TQKFPYVIFCAPPSRSLD---- 157 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~--~~~~D~Vi~~a~~~~~~~---- 157 (272)
|||||+|+ |+||++|.+.|.++ |++|+++.|..-...... .+. +. -.++|+|||||+....+.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~--~~~v~~~~r~~~dl~d~~--~~~------~~~~~~~pd~Vin~aa~~~~~~ce~~ 70 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER--GYEVIATSRSDLDLTDPE--AVA------KLLEAFKPDVVINCAAYTNVDACEKN 70 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT--SEEEEEESTTCS-TTSHH--HHH------HHHHHH--SEEEE------HHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHhhC--CCEEEEeCchhcCCCCHH--HHH------HHHHHhCCCeEeccceeecHHhhhhC
Confidence 68999997 99999999999999 999999987622211100 000 11 126899999998764321
Q ss_pred ----h---HHHHHHHH-HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEee
Q 024143 158 ----Y---PGDVRLAA-LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRL 227 (272)
Q Consensus 158 ----~---~~~~~~l~-~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlRp 227 (272)
+ .....+++ .+...-.++||+||..||+...+.+++|++++.|. +.||++|+++|+.+++.. ++|+|+
T Consensus 71 p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~--~~YG~~K~~~E~~v~~~~~~~~IlR~ 148 (286)
T PF04321_consen 71 PEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPL--NVYGRSKLEGEQAVRAACPNALILRT 148 (286)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----S--SHHHHHHHHHHHHHHHH-SSEEEEEE
T ss_pred hhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCC--CHHHHHHHHHHHHHHHhcCCEEEEec
Confidence 1 12233333 23333469999999999987666789999999887 999999999999999853 999999
Q ss_pred CceecCCCcHHH----HHHHcCccc-CCCCcccccccHHHHHHHHHHHh
Q 024143 228 AGLYKADRGAHV----YWLQKGTVD-SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 228 ~~iyG~~~~~~~----~~l~~g~~~-~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++||+....+. ..+.+++.+ ...+..++++|++|+|+++..++
T Consensus 149 ~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~ 197 (286)
T PF04321_consen 149 SWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELI 197 (286)
T ss_dssp -SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHH
T ss_pred ceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHH
Confidence 999999544333 234556543 44578899999999999998765
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=182.20 Aligned_cols=185 Identities=15% Similarity=0.045 Sum_probs=127.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhh---hhh-----CCceeeccCc-------cccCCCCEEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE---LIN-----MGITPSLKWT-------EATQKFPYVIF 148 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~---l~~-----~~i~~~~~d~-------~~~~~~D~Vi~ 148 (272)
++|||||+ ||||++++++|+++ |++|+++.|+..+.+. +.. ..++.+.+|. ++++++|+|||
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 6 KLVCVTGASGYIASWIVKLLLLR--GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 68999996 99999999999999 9999999997654322 111 1345555553 24668999999
Q ss_pred ecCCCCC--CC----h----HHHHHHHHH--Hh-cCCCeEEEEecceee--cCC---CCCCCCCCCCCCCC----CCChH
Q 024143 149 CAPPSRS--LD----Y----PGDVRLAAL--SW-NGEGSFLFTSSSAIY--DCS---DNGACDEDSPVVPI----GRSPR 206 (272)
Q Consensus 149 ~a~~~~~--~~----~----~~~~~~l~~--~~-~gvkr~V~~SS~~vY--g~~---~~~~~~E~~p~~p~----~~~~y 206 (272)
+|++... .+ . .....+++. .. .+++||||+||.++| +.. .+.+++|+++..|. ..+.|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 163 (322)
T PLN02986 84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWY 163 (322)
T ss_pred eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccch
Confidence 9986421 11 1 122233332 22 368999999998764 432 23467888754431 23689
Q ss_pred HHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH-------HHHHHHcCcccCCCCcccccccHHHHHHHHHHHhC
Q 024143 207 TDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA-------HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAST 272 (272)
Q Consensus 207 ~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~-------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~~ 272 (272)
+.+|..+|++++++ + ++++||+++|||...+ ....+..|+.. .+++.++|||++|+|+++++++.
T Consensus 164 ~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~v~v~Dva~a~~~al~ 241 (322)
T PLN02986 164 PLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL-FNNRFYRFVDVRDVALAHIKALE 241 (322)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC-CCCcCcceeEHHHHHHHHHHHhc
Confidence 99999999988764 3 7999999999996432 12223344432 24567899999999999998863
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=178.87 Aligned_cols=173 Identities=19% Similarity=0.203 Sum_probs=123.2
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccC--CCCEEEEecCCCCCC----C-
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQ--KFPYVIFCAPPSRSL----D- 157 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~--~~D~Vi~~a~~~~~~----~- 157 (272)
||||+|+ ||||++++++|+++ |++|++++|......... .+ .+.++ ++|+||||++..... .
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~--g~~v~~~~r~~~d~~~~~--~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~ 70 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE--GRVVVALTSSQLDLTDPE--AL------ERLLRAIRPDAVVNTAAYTDVDGAESDP 70 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEeCCcccCCCCHH--HH------HHHHHhCCCCEEEECCccccccccccCH
Confidence 5899996 99999999999999 999999998621111000 00 01233 469999999864321 1
Q ss_pred ---h---HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEee
Q 024143 158 ---Y---PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRL 227 (272)
Q Consensus 158 ---~---~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlRp 227 (272)
+ .....+++. ...+ .+|||+||.+||+.....+++|+++..|. +.|+++|.++|+.++.++ ++|+||
T Consensus 71 ~~~~~~n~~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~--~~Y~~~K~~~E~~~~~~~~~~~ilR~ 147 (287)
T TIGR01214 71 EKAFAVNALAPQNLARAAARHG-ARLVHISTDYVFDGEGKRPYREDDATNPL--NVYGQSKLAGEQAIRAAGPNALIVRT 147 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-CeEEEEeeeeeecCCCCCCCCCCCCCCCc--chhhHHHHHHHHHHHHhCCCeEEEEe
Confidence 1 112233331 2334 48999999999987556789999987776 799999999999999877 899999
Q ss_pred CceecCCCc-HH----HHHHHcCcc-cCCCCcccccccHHHHHHHHHHHh
Q 024143 228 AGLYKADRG-AH----VYWLQKGTV-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 228 ~~iyG~~~~-~~----~~~l~~g~~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++||++.. .+ ...+.++.. ...++..++++|++|+|+++..++
T Consensus 148 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~ 197 (287)
T TIGR01214 148 SWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALL 197 (287)
T ss_pred eecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHH
Confidence 999999742 22 222334433 223457889999999999998876
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-22 Score=179.74 Aligned_cols=188 Identities=16% Similarity=0.126 Sum_probs=133.0
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhh---hhhC-----CceeeccCc-------cccCCCCEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE---LINM-----GITPSLKWT-------EATQKFPYV 146 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~---l~~~-----~i~~~~~d~-------~~~~~~D~V 146 (272)
++++|+|||+ ||||++|+++|+++ ||.|++++|++++... +... ....+..|. +++++||.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r--GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgV 82 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR--GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGV 82 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC--CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEE
Confidence 4579999997 99999999999999 9999999999876322 3222 144555553 368899999
Q ss_pred EEecCCCCCC------C----hHHHHHHHHH-H-h-cCCCeEEEEecceeecC-----CCCCCCCCCCCCCCCC----CC
Q 024143 147 IFCAPPSRSL------D----YPGDVRLAAL-S-W-NGEGSFLFTSSSAIYDC-----SDNGACDEDSPVVPIG----RS 204 (272)
Q Consensus 147 i~~a~~~~~~------~----~~~~~~~l~~-~-~-~gvkr~V~~SS~~vYg~-----~~~~~~~E~~p~~p~~----~~ 204 (272)
||+|.+.... + -++++.+++. + . ..|||+||+||+..-.. .++..++|+..-.+.. ..
T Consensus 83 fH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~ 162 (327)
T KOG1502|consen 83 FHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKL 162 (327)
T ss_pred EEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHH
Confidence 9999984421 1 2445556552 2 2 24999999999865321 1234778877543321 13
Q ss_pred hHHHHHHHHHHHHHHcC------eeEEeeCceecCCCcH-------HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 205 PRTDVLLKAEKVILEFG------GCVLRLAGLYKADRGA-------HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~~------~~IlRp~~iyG~~~~~-------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
-|..+|..+|+..+++. .+.+.|+.|+||.-.+ ....+.+|......+....||||+|||.+.+.|+
T Consensus 163 ~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~ 242 (327)
T KOG1502|consen 163 WYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLAL 242 (327)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHH
Confidence 58899999999988873 6889999999997543 1123455654333455566999999999999987
Q ss_pred C
Q 024143 272 T 272 (272)
Q Consensus 272 ~ 272 (272)
+
T Consensus 243 E 243 (327)
T KOG1502|consen 243 E 243 (327)
T ss_pred c
Confidence 4
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-22 Score=180.39 Aligned_cols=185 Identities=18% Similarity=0.133 Sum_probs=131.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCC-
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRS- 155 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~- 155 (272)
|+|+|||+ ||||+++++.|+++ |++|++++|++.+...+...+++.+.+|. +.++++|+|||+++....
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~ 78 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ--GEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLW 78 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC--CCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccC
Confidence 47999996 99999999999999 99999999987665444334566665553 246789999999975321
Q ss_pred -CCh-------HHHHHHHH--HHhcCCCeEEEEecceeecC-CCCCCCCCCCCCCCCC-CChHHHHHHHHHHHHHHc---
Q 024143 156 -LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDC-SDNGACDEDSPVVPIG-RSPRTDVLLKAEKVILEF--- 220 (272)
Q Consensus 156 -~~~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~-~~~~~~~E~~p~~p~~-~~~y~~sk~~aE~~l~~~--- 220 (272)
.+. .....+++ ....++++||++||..+|+. ..+.+++|+.+..|.. .+.|+.+|..+|++++++
T Consensus 79 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 158 (328)
T TIGR03466 79 APDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE 158 (328)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh
Confidence 111 11223333 13457899999999999985 3345789988876632 258999999999998874
Q ss_pred -C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 221 -G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 221 -~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+ ++++||+.+||++... .......+......+...+|||++|+|++++.++
T Consensus 159 ~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~ 218 (328)
T TIGR03466 159 KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLAL 218 (328)
T ss_pred cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHH
Confidence 3 7999999999997431 1112222332222234578999999999998875
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-22 Score=180.09 Aligned_cols=185 Identities=14% Similarity=-0.015 Sum_probs=126.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh---hh-----CCceeeccCc-------cccCCCCEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL---IN-----MGITPSLKWT-------EATQKFPYVI 147 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l---~~-----~~i~~~~~d~-------~~~~~~D~Vi 147 (272)
.++|||||+ ||||++++++|+++ |++|++++|++...... .. ..++.+.+|. +.++++|+||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFR--GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 478999996 99999999999999 99999998886543221 11 1244444443 2456899999
Q ss_pred EecCCCCC----CChHH-------HHHHHHH-H-h-cCCCeEEEEecceeecCC-----CCCCCCCCCCCCCCC----CC
Q 024143 148 FCAPPSRS----LDYPG-------DVRLAAL-S-W-NGEGSFLFTSSSAIYDCS-----DNGACDEDSPVVPIG----RS 204 (272)
Q Consensus 148 ~~a~~~~~----~~~~~-------~~~~l~~-~-~-~gvkr~V~~SS~~vYg~~-----~~~~~~E~~p~~p~~----~~ 204 (272)
|+|+.... .++.+ ...+++. + . .++++||++||..+|+.. ...+++|+++..|.. .+
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~ 162 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ 162 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence 99986321 11111 1223331 1 2 257899999999887542 234689998876631 25
Q ss_pred hHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH-------HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 205 PRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA-------HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~-------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+|+.+|..+|++++.+ + ++++||+++|||+..+ +...+.+|+... +...++|||++|+|++++.++
T Consensus 163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~-~~~~r~~i~v~Dva~a~~~~l 241 (325)
T PLN02989 163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF-NTTHHRFVDVRDVALAHVKAL 241 (325)
T ss_pred chHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC-CCcCcCeeEHHHHHHHHHHHh
Confidence 7999999999998753 3 7999999999997532 112233444321 235579999999999998876
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=175.09 Aligned_cols=186 Identities=17% Similarity=0.136 Sum_probs=133.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh-hhhh----CCceeeccCc--cccCCCCEEEEecCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-ELIN----MGITPSLKWT--EATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~-~l~~----~~i~~~~~d~--~~~~~~D~Vi~~a~~~~~ 155 (272)
.+||+|||+ ||||+||+++|..+ ||+|++++.-..... .++. ...+...-|. ..+.++|.|+|+|++..+
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm~e--gh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAapasp 104 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLMTE--GHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAAPASP 104 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHHhc--CCeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhhhccCCCC
Confidence 479999985 99999999999999 999999987533321 1111 1122222221 357799999999997554
Q ss_pred CCh------------HHHHHHHHHHhcCCCeEEEEecceeecCCCCCCCCCCCC--CCCCC-CChHHHHHHHHHHHHHHc
Q 024143 156 LDY------------PGDVRLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSP--VVPIG-RSPRTDVLLKAEKVILEF 220 (272)
Q Consensus 156 ~~~------------~~~~~~l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p--~~p~~-~~~y~~sk~~aE~~l~~~ 220 (272)
..| ...+..+..++.--+||++.||+.|||++..+|..|+.. ..|.+ .+.|...|..+|.++..+
T Consensus 105 ~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y 184 (350)
T KOG1429|consen 105 PHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAY 184 (350)
T ss_pred cccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHh
Confidence 321 222223333333348999999999999976677777653 22221 368999999999999987
Q ss_pred C------eeEEeeCceecCCCc--------HHHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 221 G------GCVLRLAGLYKADRG--------AHVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 221 ~------~~IlRp~~iyG~~~~--------~~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+ ..|.|+.++|||.-. .+.....++++ +++|.+.++|.||+|+++++++.|
T Consensus 185 ~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm 252 (350)
T KOG1429|consen 185 HKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLM 252 (350)
T ss_pred hcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHh
Confidence 5 799999999999632 23334455554 589999999999999999999876
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.8e-22 Score=181.70 Aligned_cols=186 Identities=13% Similarity=0.041 Sum_probs=122.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C----CceeeccCc-------cccCCCCEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M----GITPSLKWT-------EATQKFPYVI 147 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~----~i~~~~~d~-------~~~~~~D~Vi 147 (272)
.++|||||+ ||||++|+++|+++ |++|++++|+++....+.. . .++.+.+|. +.++++|+||
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi 82 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF 82 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHC--CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence 368999996 99999999999999 9999999998655433211 1 234444443 2466899999
Q ss_pred EecCCCCCC--C----h----HHHHHHHHH--HhcC-CCeEEEEecceeecCCC-CCC-CCCCCCC-------CCCCCCh
Q 024143 148 FCAPPSRSL--D----Y----PGDVRLAAL--SWNG-EGSFLFTSSSAIYDCSD-NGA-CDEDSPV-------VPIGRSP 205 (272)
Q Consensus 148 ~~a~~~~~~--~----~----~~~~~~l~~--~~~g-vkr~V~~SS~~vYg~~~-~~~-~~E~~p~-------~p~~~~~ 205 (272)
|+|+..... + . ...+.+++. ...+ ++||||+||.++|+... ..+ ++|+... .+...++
T Consensus 83 H~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~ 162 (351)
T PLN02650 83 HVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWM 162 (351)
T ss_pred EeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccch
Confidence 999864211 1 1 222334442 2334 78999999998776432 223 5666421 1111258
Q ss_pred HHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH-----HHHHH--HcCc-ccCCCCcccccccHHHHHHHHHHHh
Q 024143 206 RTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA-----HVYWL--QKGT-VDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 206 y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~-----~~~~l--~~g~-~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+.+|..+|++++.+ + ++++||+++|||+... +...+ ..+. ......+.++||||+|+|++++.++
T Consensus 163 Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l 242 (351)
T PLN02650 163 YFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLF 242 (351)
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHh
Confidence 999999999988764 3 7999999999997431 11111 2222 1111223579999999999998876
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.9e-22 Score=180.76 Aligned_cols=185 Identities=17% Similarity=0.133 Sum_probs=130.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-----hhhhh------hCCceeeccCc---c----ccC-
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI------NMGITPSLKWT---E----ATQ- 141 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-----~~~l~------~~~i~~~~~d~---~----~~~- 141 (272)
..+++|||||+ ||||++|+++|+++ |++|++++|.+.. .+.+. ...++...+|. + .++
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 81 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSK--GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD 81 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC--CCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence 34578999996 99999999999999 9999999986542 22221 01244444543 1 233
Q ss_pred -CCCEEEEecCCCCCC----C--h-----HHHHHHHHH--HhcCCC-----eEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 142 -KFPYVIFCAPPSRSL----D--Y-----PGDVRLAAL--SWNGEG-----SFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 142 -~~D~Vi~~a~~~~~~----~--~-----~~~~~~l~~--~~~gvk-----r~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
++|+|||+|+..... + + .....+++. ...+++ +|||+||.++||.... +++|++|+.|.
T Consensus 82 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~- 159 (340)
T PLN02653 82 IKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPR- 159 (340)
T ss_pred cCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCC-
Confidence 579999999864321 1 1 112233331 233443 8999999999997543 78999998887
Q ss_pred CChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH------H---HHHHHcCcc----cCCCCcccccccHHHH
Q 024143 203 RSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------H---VYWLQKGTV----DSRPDHILNLIHYEVN 263 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~------~---~~~l~~g~~----~~~~~~~~~~I~v~Dv 263 (272)
+.|+.+|+++|++++.+ + .+..|+.+.|||+... + ..++..++. .+++++.++|||++|+
T Consensus 160 -~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~ 238 (340)
T PLN02653 160 -SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDY 238 (340)
T ss_pred -ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHH
Confidence 89999999999998764 3 4678999999986431 1 112344542 2678999999999999
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
|++++.++
T Consensus 239 a~a~~~~~ 246 (340)
T PLN02653 239 VEAMWLML 246 (340)
T ss_pred HHHHHHHH
Confidence 99999876
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-22 Score=172.88 Aligned_cols=185 Identities=15% Similarity=0.148 Sum_probs=133.4
Q ss_pred CeEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCC--cchhhhhh----CCceeeccCcc---------ccCCCCEEEE
Q 024143 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTA--DHHDELIN----MGITPSLKWTE---------ATQKFPYVIF 148 (272)
Q Consensus 85 ~~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~--~~~~~l~~----~~i~~~~~d~~---------~~~~~D~Vi~ 148 (272)
++++||| |||||++.+..+...+|.++.+.++.-. .....++. ....++.+|.. .-++.|.|||
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 7899997 6999999999999999988887765410 01222211 12333444421 2358999999
Q ss_pred ecCCCCCCC-h---HHH-------HHHHHH---HhcCCCeEEEEecceeecCCCCCCCC-CCCCCCCCCCChHHHHHHHH
Q 024143 149 CAPPSRSLD-Y---PGD-------VRLAAL---SWNGEGSFLFTSSSAIYDCSDNGACD-EDSPVVPIGRSPRTDVLLKA 213 (272)
Q Consensus 149 ~a~~~~~~~-~---~~~-------~~~l~~---~~~gvkr~V~~SS~~vYg~~~~~~~~-E~~p~~p~~~~~y~~sk~~a 213 (272)
.|+...... | .+. ...++. ...++++|||+||+.|||+.++.+.. |.++++|. ++|+++|+++
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPt--npyAasKaAa 164 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPT--NPYAASKAAA 164 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCC--CchHHHHHHH
Confidence 998654221 1 111 122221 22368999999999999998777666 99999998 9999999999
Q ss_pred HHHHHHcC------eeEEeeCceecCCCcH------HHHHHHcCc---ccCCCCcccccccHHHHHHHHHHHh
Q 024143 214 EKVILEFG------GCVLRLAGLYKADRGA------HVYWLQKGT---VDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 214 E~~l~~~~------~~IlRp~~iyG~~~~~------~~~~l~~g~---~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|..++.++ ++++|.++||||++.+ |.....++. +.++|.+.++|+||+|+++++.+++
T Consensus 165 E~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~ 237 (331)
T KOG0747|consen 165 EMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVL 237 (331)
T ss_pred HHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHH
Confidence 99999875 7999999999999763 222223333 2488999999999999999998775
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=173.69 Aligned_cols=181 Identities=18% Similarity=0.133 Sum_probs=123.4
Q ss_pred EEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeecc--CccccCCCCEEEEecCCCCC-CC-----
Q 024143 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK--WTEATQKFPYVIFCAPPSRS-LD----- 157 (272)
Q Consensus 87 IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~--d~~~~~~~D~Vi~~a~~~~~-~~----- 157 (272)
|||||+ ||||+++++.|+++ |++|++++|++.+...+....+..... ..+.+.++|+|||||+.... .+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~ 78 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD--GHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGEPIADKRWTEER 78 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc--CCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCCCcccccCCHHH
Confidence 689996 99999999999999 999999999876654322112211111 12356789999999986431 11
Q ss_pred -------hHHHHHHHHH--HhcCC--CeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc---C--
Q 024143 158 -------YPGDVRLAAL--SWNGE--GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF---G-- 221 (272)
Q Consensus 158 -------~~~~~~~l~~--~~~gv--kr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~---~-- 221 (272)
....+.+++. ...++ ++||++||.++|+...+.+++|+++..+. +.|++.+.+.|+.+... +
T Consensus 79 ~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~ 156 (292)
T TIGR01777 79 KQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGD--DFLAELCRDWEEAAQAAEDLGTR 156 (292)
T ss_pred HHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCC--ChHHHHHHHHHHHhhhchhcCCc
Confidence 1222344442 34455 35777788889997656688999865554 56677777777765532 3
Q ss_pred eeEEeeCceecCCCcHHHH---HH--HcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 222 GCVLRLAGLYKADRGAHVY---WL--QKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 ~~IlRp~~iyG~~~~~~~~---~l--~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++|+||+++|||+...... .+ ..+..++.+++.+++||++|+|+++..++
T Consensus 157 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l 211 (292)
T TIGR01777 157 VVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFAL 211 (292)
T ss_pred eEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHh
Confidence 8999999999997542211 11 11223467789999999999999999876
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.6e-22 Score=181.80 Aligned_cols=187 Identities=16% Similarity=0.038 Sum_probs=127.1
Q ss_pred CcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----------CCceeeccCc-------cccC
Q 024143 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----------MGITPSLKWT-------EATQ 141 (272)
Q Consensus 81 ~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----------~~i~~~~~d~-------~~~~ 141 (272)
...+++|||||+ ||||++|+++|+++ |++|++++|+.++...+.. .++..+..|. ++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~--G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRH--GYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 356789999996 99999999999999 9999998887654433321 1344444443 2467
Q ss_pred CCCEEEEecCCCCC-------CC----hHHHHHHHHH--Hh-cCCCeEEEEecc--eeecCC--CC--CCCCCCCC----
Q 024143 142 KFPYVIFCAPPSRS-------LD----YPGDVRLAAL--SW-NGEGSFLFTSSS--AIYDCS--DN--GACDEDSP---- 197 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~-------~~----~~~~~~~l~~--~~-~gvkr~V~~SS~--~vYg~~--~~--~~~~E~~p---- 197 (272)
++|+|||+++.... .. ..+.+.+++. .. .+++||||+||. .+|+.. .. .+++|+++
T Consensus 128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~ 207 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES 207 (367)
T ss_pred hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence 89999999975321 11 1233445542 22 379999999996 478642 11 34667643
Q ss_pred --CCCCCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCc---H-HHHHHHcCcccCCCCcccccccHHHHHH
Q 024143 198 --VVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG---A-HVYWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 198 --~~p~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~---~-~~~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
..|. ++|+.+|..+|++++.+ + ++++||+++|||+.. + ....+.++.....++...+|+||+|+|+
T Consensus 208 ~~~~p~--~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~ 285 (367)
T PLN02686 208 FCRDNK--LWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADGLLATADVERLAE 285 (367)
T ss_pred hccccc--chHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCCCcCeEEHHHHHH
Confidence 2233 68999999999998754 3 799999999999742 1 1222334443222334467999999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
++++++
T Consensus 286 A~~~al 291 (367)
T PLN02686 286 AHVCVY 291 (367)
T ss_pred HHHHHH
Confidence 998876
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-21 Score=177.84 Aligned_cols=186 Identities=16% Similarity=0.098 Sum_probs=128.8
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch----hhhh------hCCceeeccCc---c----cc--C
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH----DELI------NMGITPSLKWT---E----AT--Q 141 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~----~~l~------~~~i~~~~~d~---~----~~--~ 141 (272)
+.+++|+|||+ ||||++|+++|+++ |++|++++|..... ..+. ..+++...+|. + ++ .
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~ 80 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLA--GYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST 80 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence 34578999996 99999999999999 99999998753221 1111 11344454543 1 22 2
Q ss_pred CCCEEEEecCCCCC----CCh-------HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHH
Q 024143 142 KFPYVIFCAPPSRS----LDY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~----~~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (272)
++|+|||+|+.... .+. .....+++. ...++++|||+||+++|+...+.+++|+++..|. ++|+.
T Consensus 81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~--~~Y~~ 158 (352)
T PLN02240 81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSAT--NPYGR 158 (352)
T ss_pred CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCC--CHHHH
Confidence 68999999985321 111 112223331 3457899999999999986556789999998886 79999
Q ss_pred HHHHHHHHHHHc-----C--eeEEeeCceecCCC--------c-------HHHHHHHcCc--c---c------CCCCccc
Q 024143 209 VLLKAEKVILEF-----G--GCVLRLAGLYKADR--------G-------AHVYWLQKGT--V---D------SRPDHIL 255 (272)
Q Consensus 209 sk~~aE~~l~~~-----~--~~IlRp~~iyG~~~--------~-------~~~~~l~~g~--~---~------~~~~~~~ 255 (272)
+|..+|++++.+ + .+++|++++||+.. . ++...+..++ . + +.|.+.+
T Consensus 159 sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~ 238 (352)
T PLN02240 159 TKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVR 238 (352)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEE
Confidence 999999998753 2 58899999998631 0 1122233332 1 2 2568899
Q ss_pred ccccHHHHHHHHHHHh
Q 024143 256 NLIHYEVNTLVLFIAS 271 (272)
Q Consensus 256 ~~I~v~Dva~ai~~a~ 271 (272)
+|||++|+|+++++++
T Consensus 239 ~~i~v~D~a~a~~~a~ 254 (352)
T PLN02240 239 DYIHVMDLADGHIAAL 254 (352)
T ss_pred eeEEHHHHHHHHHHHH
Confidence 9999999999988765
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.88 E-value=8e-22 Score=176.07 Aligned_cols=170 Identities=16% Similarity=0.140 Sum_probs=116.8
Q ss_pred EEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc----ccc--CCCCEEEEecCCCCC-----
Q 024143 88 LIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EAT--QKFPYVIFCAPPSRS----- 155 (272)
Q Consensus 88 lItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~----~~~--~~~D~Vi~~a~~~~~----- 155 (272)
||||+ ||||++|++.|+++ |++|+++.+.. + ....|. +.+ .++|+|||||+....
T Consensus 1 lItGa~GfiG~~l~~~L~~~--g~~v~~~~~~~-~----------~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~ 67 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEAL--GFTNLVLRTHK-E----------LDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANM 67 (306)
T ss_pred CcccCCCcccHHHHHHHHhC--CCcEEEeeccc-c----------CCCCCHHHHHHHHhccCCCEEEEeeeeecccchhh
Confidence 68986 99999999999999 99888665432 1 011111 122 368999999986321
Q ss_pred CC---h----HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCC----CCCCCCCChHHHHHHHHHHHHHHc--
Q 024143 156 LD---Y----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS----PVVPIGRSPRTDVLLKAEKVILEF-- 220 (272)
Q Consensus 156 ~~---~----~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~----p~~p~~~~~y~~sk~~aE~~l~~~-- 220 (272)
.+ + .....+++ ....++++|||+||+.||+.....+++|++ +..|. ...|+.+|..+|++++.+
T Consensus 68 ~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~-~~~Y~~sK~~~e~~~~~~~~ 146 (306)
T PLN02725 68 TYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPT-NEWYAIAKIAGIKMCQAYRI 146 (306)
T ss_pred hCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCC-cchHHHHHHHHHHHHHHHHH
Confidence 11 1 11233343 234678999999999999975567889987 33343 125999999999877653
Q ss_pred --C--eeEEeeCceecCCCc----------HHHHH----HHcCcc----cCCCCcccccccHHHHHHHHHHHh
Q 024143 221 --G--GCVLRLAGLYKADRG----------AHVYW----LQKGTV----DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 221 --~--~~IlRp~~iyG~~~~----------~~~~~----l~~g~~----~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+ ++++||+++|||+.. .+..+ ...+.+ .+++++.++|||++|++++++.++
T Consensus 147 ~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~ 219 (306)
T PLN02725 147 QYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLM 219 (306)
T ss_pred HhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHH
Confidence 3 899999999999742 11111 123432 256788899999999999998876
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-21 Score=174.84 Aligned_cols=183 Identities=16% Similarity=0.096 Sum_probs=124.8
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh----hhhh---CCceeeccCc---c----ccC--CCCEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD----ELIN---MGITPSLKWT---E----ATQ--KFPYVI 147 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~----~l~~---~~i~~~~~d~---~----~~~--~~D~Vi 147 (272)
|||||||+ ||||++|+++|+++ |++|++++|...... .+.. ..+..+..|. + ++. ++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv 78 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI 78 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence 48999996 99999999999999 999999886432211 1111 1233344442 1 232 689999
Q ss_pred EecCCCCCC----C---h----HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC-CCCCCChHHHHHHHH
Q 024143 148 FCAPPSRSL----D---Y----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV-VPIGRSPRTDVLLKA 213 (272)
Q Consensus 148 ~~a~~~~~~----~---~----~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~-~p~~~~~y~~sk~~a 213 (272)
|+|+..... . + .....+++ ....++++||++||+++|+.....+++|++|. .|. ++|+.+|..+
T Consensus 79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~--~~Y~~sK~~~ 156 (338)
T PRK10675 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQ--SPYGKSKLMV 156 (338)
T ss_pred ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCC--ChhHHHHHHH
Confidence 999754311 1 1 11223333 23457899999999999987555678999886 455 7999999999
Q ss_pred HHHHHHc-----C--eeEEeeCceecCCC------------cHHH---HHHHcC-c--c--c------CCCCcccccccH
Q 024143 214 EKVILEF-----G--GCVLRLAGLYKADR------------GAHV---YWLQKG-T--V--D------SRPDHILNLIHY 260 (272)
Q Consensus 214 E~~l~~~-----~--~~IlRp~~iyG~~~------------~~~~---~~l~~g-~--~--~------~~~~~~~~~I~v 260 (272)
|++++++ + ++++|++.+||+.. ..+. .++..+ . + + ..+++.++|||+
T Consensus 157 E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v 236 (338)
T PRK10675 157 EQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV 236 (338)
T ss_pred HHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEH
Confidence 9998753 2 68999999888631 0111 122222 1 1 1 246788999999
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|+++++++
T Consensus 237 ~D~a~~~~~~~ 247 (338)
T PRK10675 237 MDLADGHVAAM 247 (338)
T ss_pred HHHHHHHHHHH
Confidence 99999998876
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=178.28 Aligned_cols=185 Identities=15% Similarity=0.062 Sum_probs=122.3
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc-------cccCCCCEEEEecC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT-------EATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~-------~~~~~~D~Vi~~a~ 151 (272)
++|||||+ ||||++++++|+++ |++|++++|++.+...+.. ..++.+..|. +++.++|+|||+|+
T Consensus 11 ~~vLVtG~~GfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~ 88 (353)
T PLN02896 11 GTYCVTGATGYIGSWLVKLLLQR--GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAA 88 (353)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCc
Confidence 68999996 99999999999999 9999999997654432211 1344444543 24568999999998
Q ss_pred CCCCC------C---h-H--------HHHHHHHH--Hhc-CCCeEEEEecceeecCCC--C---CCCCCCCC--CC----
Q 024143 152 PSRSL------D---Y-P--------GDVRLAAL--SWN-GEGSFLFTSSSAIYDCSD--N---GACDEDSP--VV---- 199 (272)
Q Consensus 152 ~~~~~------~---~-~--------~~~~~l~~--~~~-gvkr~V~~SS~~vYg~~~--~---~~~~E~~p--~~---- 199 (272)
..... + + . ....+++. ... ++++|||+||.++||... + .+++|+.+ +.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~ 168 (353)
T PLN02896 89 SMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWN 168 (353)
T ss_pred cccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhc
Confidence 63211 1 1 0 11223332 233 478999999999998532 1 35777632 11
Q ss_pred -CCCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCc----HHHHHHH---cCcc--cC--CC----Cccccc
Q 024143 200 -PIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG----AHVYWLQ---KGTV--DS--RP----DHILNL 257 (272)
Q Consensus 200 -p~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~----~~~~~l~---~g~~--~~--~~----~~~~~~ 257 (272)
+...++|+.+|+++|++++.+ + .+++||+++|||+.. .....+. .|.. .. .+ ...++|
T Consensus 169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~df 248 (353)
T PLN02896 169 TKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIAL 248 (353)
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeE
Confidence 011258999999999988775 3 799999999999753 1111222 2321 11 11 124699
Q ss_pred ccHHHHHHHHHHHh
Q 024143 258 IHYEVNTLVLFIAS 271 (272)
Q Consensus 258 I~v~Dva~ai~~a~ 271 (272)
||++|+|++++.++
T Consensus 249 i~v~Dva~a~~~~l 262 (353)
T PLN02896 249 VHIEDICDAHIFLM 262 (353)
T ss_pred EeHHHHHHHHHHHH
Confidence 99999999998876
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-21 Score=169.88 Aligned_cols=169 Identities=15% Similarity=0.125 Sum_probs=127.8
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc----ccc--CCCCEEEEecCCCCCCC-
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EAT--QKFPYVIFCAPPSRSLD- 157 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~----~~~--~~~D~Vi~~a~~~~~~~- 157 (272)
+|||||+ |.+|+.|++.|. . +++|++++|..-. ..|. +.+ .++|+|||||+....+.
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~--~~~v~a~~~~~~D------------itd~~~v~~~i~~~~PDvVIn~AAyt~vD~a 66 (281)
T COG1091 2 KILITGANGQLGTELRRALP-G--EFEVIATDRAELD------------ITDPDAVLEVIRETRPDVVINAAAYTAVDKA 66 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-C--CceEEeccCcccc------------ccChHHHHHHHHhhCCCEEEECccccccccc
Confidence 4999997 999999999998 6 8999999986511 1222 122 37899999999865431
Q ss_pred -------h---HHHHHHHHH-HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeE
Q 024143 158 -------Y---PGDVRLAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCV 224 (272)
Q Consensus 158 -------~---~~~~~~l~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~I 224 (272)
| .....+++. +..---++||+||..||+...+.++.|+++++|. +.||++|+.+|+.+++++ .+|
T Consensus 67 E~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~--nvYG~sKl~GE~~v~~~~~~~~I 144 (281)
T COG1091 67 ESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPL--NVYGRSKLAGEEAVRAAGPRHLI 144 (281)
T ss_pred cCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCCh--hhhhHHHHHHHHHHHHhCCCEEE
Confidence 1 112233332 2222458999999999988767899999999998 899999999999999986 899
Q ss_pred EeeCceecCCCcHHHHH----HHcCcc-cCCCCcccccccHHHHHHHHHHHh
Q 024143 225 LRLAGLYKADRGAHVYW----LQKGTV-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 225 lRp~~iyG~~~~~~~~~----l~~g~~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+|.+++||.....|... ...|+. ....++..+++++.|+|+++...+
T Consensus 145 ~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll 196 (281)
T COG1091 145 LRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELL 196 (281)
T ss_pred EEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHH
Confidence 99999999865444322 334444 345688999999999999998754
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-21 Score=176.48 Aligned_cols=183 Identities=13% Similarity=0.098 Sum_probs=124.0
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCe-EEEEecCC--cchhhhhh----CCceeeccCc---c----ccC--CCCEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTA--DHHDELIN----MGITPSLKWT---E----ATQ--KFPYVI 147 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~-V~~~~R~~--~~~~~l~~----~~i~~~~~d~---~----~~~--~~D~Vi 147 (272)
|||||||+ ||||++|+++|+++ |++ |+++++.. .....+.. ..++.+..|. + +++ ++|+||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 78 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINN--TQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVM 78 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHh--CCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEE
Confidence 48999996 99999999999999 876 55555532 12222211 1233344442 1 232 589999
Q ss_pred EecCCCCCC-------C----hHHHHHHHHH-Hh----------cCCCeEEEEecceeecCCC---------C-CCCCCC
Q 024143 148 FCAPPSRSL-------D----YPGDVRLAAL-SW----------NGEGSFLFTSSSAIYDCSD---------N-GACDED 195 (272)
Q Consensus 148 ~~a~~~~~~-------~----~~~~~~~l~~-~~----------~gvkr~V~~SS~~vYg~~~---------~-~~~~E~ 195 (272)
|+|+..... + ......+++. +. .++++|||+||..+|+... . .+++|+
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~ 158 (352)
T PRK10084 79 HLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET 158 (352)
T ss_pred ECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc
Confidence 999864211 1 1222333331 11 1467999999999998521 1 247888
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH------HHHHHHcCcc---cCCCCcccccccH
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHY 260 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~------~~~~l~~g~~---~~~~~~~~~~I~v 260 (272)
++..|. +.|+.+|+.+|++++.+ + .+++|++.+|||+... +...+..+.. ++++++.++|||+
T Consensus 159 ~~~~p~--~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v 236 (352)
T PRK10084 159 TAYAPS--SPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236 (352)
T ss_pred CCCCCC--ChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEH
Confidence 888776 89999999999988764 3 7999999999998521 1122344432 3678899999999
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|++++.++
T Consensus 237 ~D~a~a~~~~l 247 (352)
T PRK10084 237 EDHARALYKVV 247 (352)
T ss_pred HHHHHHHHHHH
Confidence 99999998765
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3e-21 Score=174.29 Aligned_cols=170 Identities=16% Similarity=0.105 Sum_probs=122.0
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~~ 156 (272)
|||+|||+ ||||++|+++|+++ ||+|++++|++.+...+...+++.+.+|. ++++++|+|||+++.....
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~--g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~ 78 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE--GYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSD 78 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCC
Confidence 48999996 99999999999999 99999999987665544455777777663 2578999999998643211
Q ss_pred --C----hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEe
Q 024143 157 --D----YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLR 226 (272)
Q Consensus 157 --~----~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlR 226 (272)
. ......+++ +...|++||||+||.+++.. +. ++|.++|.++|+++++++ ++|+|
T Consensus 79 ~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~-------------~~--~~~~~~K~~~e~~l~~~~l~~tilR 143 (317)
T CHL00194 79 LYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQY-------------PY--IPLMKLKSDIEQKLKKSGIPYTIFR 143 (317)
T ss_pred ccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccccc-------------CC--ChHHHHHHHHHHHHHHcCCCeEEEe
Confidence 1 122334444 24568999999998653210 11 467889999999999887 89999
Q ss_pred eCceecCCCcHHHHHHHcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 227 LAGLYKADRGAHVYWLQKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 227 p~~iyG~~~~~~~~~l~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+.+|+.-...+...+..+++ +..++..++|||++|+|++++.++
T Consensus 144 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 190 (317)
T CHL00194 144 LAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSL 190 (317)
T ss_pred ecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHh
Confidence 999986422111111222332 344567789999999999998876
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-21 Score=172.57 Aligned_cols=178 Identities=13% Similarity=0.137 Sum_probs=118.5
Q ss_pred EEEEcC-cHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhCCceeeccC---cc----c----cCCCCEEEEecCCC
Q 024143 87 LLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLKW---TE----A----TQKFPYVIFCAPPS 153 (272)
Q Consensus 87 IlItGa-GfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~~i~~~~~d---~~----~----~~~~D~Vi~~a~~~ 153 (272)
|||||+ ||||+++++.|.++ |+ +|++++|..... .+..........| .+ . +.++|+|||+|+..
T Consensus 1 ilItGatG~iG~~l~~~L~~~--g~~~v~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~ 77 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNER--GITDILVVDNLRDGH-KFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACS 77 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHc--CCceEEEEecCCCch-hhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECcccc
Confidence 689996 99999999999999 97 788887754322 1111111112222 11 1 24899999999864
Q ss_pred CCC--Ch-------HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCC-CCCCCChHHHHHHHHHHHHHHc-
Q 024143 154 RSL--DY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV-VPIGRSPRTDVLLKAEKVILEF- 220 (272)
Q Consensus 154 ~~~--~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~-~p~~~~~y~~sk~~aE~~l~~~- 220 (272)
... +. .....+++. ...++ +|||+||++||+... .+.+|+++. .|. +.|+.+|..+|++++++
T Consensus 78 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~-~~~~e~~~~~~p~--~~Y~~sK~~~e~~~~~~~ 153 (314)
T TIGR02197 78 DTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGE-AGFREGRELERPL--NVYGYSKFLFDQYVRRRV 153 (314)
T ss_pred CccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCC-CCcccccCcCCCC--CHHHHHHHHHHHHHHHHh
Confidence 321 11 122233331 23455 899999999998753 445666553 354 79999999999998752
Q ss_pred -----C--eeEEeeCceecCCCc------HH----HHHHHcCcc---------cCCCCcccccccHHHHHHHHHHHh
Q 024143 221 -----G--GCVLRLAGLYKADRG------AH----VYWLQKGTV---------DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 221 -----~--~~IlRp~~iyG~~~~------~~----~~~l~~g~~---------~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+ .+++||+.+||++.. .+ ...+..++. +++|++.++|+|++|++++++.++
T Consensus 154 ~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~ 230 (314)
T TIGR02197 154 LPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLL 230 (314)
T ss_pred HhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHH
Confidence 2 789999999999742 11 112333432 135678899999999999998876
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.6e-21 Score=169.98 Aligned_cols=184 Identities=14% Similarity=0.113 Sum_probs=125.6
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-----chhhhhh-CCceeeccCc-------cccCC--CCEEEEe
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-----HHDELIN-MGITPSLKWT-------EATQK--FPYVIFC 149 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-----~~~~l~~-~~i~~~~~d~-------~~~~~--~D~Vi~~ 149 (272)
+|+|||+ |+||++++++|+++++.++|++++|... ....+.. .+++.+.+|. +++++ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 5899996 9999999999999821278998876321 1111111 1345554443 13444 8999999
Q ss_pred cCCCCCC----Ch-------HHHHHHHHH--HhcCC-CeEEEEecceeecCCCC-CCCCCCCCCCCCCCChHHHHHHHHH
Q 024143 150 APPSRSL----DY-------PGDVRLAAL--SWNGE-GSFLFTSSSAIYDCSDN-GACDEDSPVVPIGRSPRTDVLLKAE 214 (272)
Q Consensus 150 a~~~~~~----~~-------~~~~~~l~~--~~~gv-kr~V~~SS~~vYg~~~~-~~~~E~~p~~p~~~~~y~~sk~~aE 214 (272)
|+..... +. .....+++. ...+. .++||+||..+||.... .+++|+++..|. +.|+.+|+.+|
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~--~~Y~~sK~~~e 158 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPS--SPYSASKAASD 158 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCC--CchHHHHHHHH
Confidence 9864321 11 111223331 22333 38999999999986432 368899887776 79999999999
Q ss_pred HHHHHc----C--eeEEeeCceecCCCcH------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 215 KVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 215 ~~l~~~----~--~~IlRp~~iyG~~~~~------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+++.+ + ++++||+.+||++... +...+..+.+ ++++++.++|||++|+|+++..++
T Consensus 159 ~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~ 230 (317)
T TIGR01181 159 HLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVL 230 (317)
T ss_pred HHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHH
Confidence 988754 3 7999999999997531 1223444443 367788999999999999998765
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.6e-21 Score=171.06 Aligned_cols=186 Identities=12% Similarity=0.032 Sum_probs=123.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh---hhhh-----CCceeeccCc-------cccCCCCEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---ELIN-----MGITPSLKWT-------EATQKFPYVI 147 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~---~l~~-----~~i~~~~~d~-------~~~~~~D~Vi 147 (272)
.++|||||+ ||||++++++|+++ ||+|++++|+..... .+.. .+++.+.+|. +++.++|.|+
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~ 83 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSR--GYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF 83 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 368999996 99999999999999 999999998643211 1111 1345555553 2577899999
Q ss_pred EecCCCCCC--C-------hHHHHHHHHH--Hh-cCCCeEEEEecceee--cCC---CCCCCCCCCCCCCCC----CChH
Q 024143 148 FCAPPSRSL--D-------YPGDVRLAAL--SW-NGEGSFLFTSSSAIY--DCS---DNGACDEDSPVVPIG----RSPR 206 (272)
Q Consensus 148 ~~a~~~~~~--~-------~~~~~~~l~~--~~-~gvkr~V~~SS~~vY--g~~---~~~~~~E~~p~~p~~----~~~y 206 (272)
|++++.... + ......+++. .. .+++|+|++||..++ +.. ...+++|+++..+.. ...|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y 163 (297)
T PLN02583 84 CCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWH 163 (297)
T ss_pred EeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHH
Confidence 987653211 1 1223333432 12 258999999998764 311 123678876533220 1269
Q ss_pred HHHHHHHHHHHHHc----C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHhC
Q 024143 207 TDVLLKAEKVILEF----G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAST 272 (272)
Q Consensus 207 ~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~~ 272 (272)
+.+|..+|++++++ + ++++||+++|||+..... .+..+.+...+....+||||+|+|+++++|++
T Consensus 164 ~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~-~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~ 234 (297)
T PLN02583 164 ALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN-PYLKGAAQMYENGVLVTVDVNFLVDAHIRAFE 234 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch-hhhcCCcccCcccCcceEEHHHHHHHHHHHhc
Confidence 99999999998653 3 799999999999754322 12333322223345789999999999999874
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.9e-21 Score=180.35 Aligned_cols=189 Identities=13% Similarity=0.096 Sum_probs=125.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCC-CeEEEEecCCcchh---hhh----h--------------------CCceee
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHD---ELI----N--------------------MGITPS 133 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~---~l~----~--------------------~~i~~~ 133 (272)
..++|||||+ ||||++|+++|++..+. .+|+++.|..+... .+. . ..++++
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i 89 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV 89 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence 4578999996 99999999999876233 37899999754211 110 0 234444
Q ss_pred ccCc--------------cccCCCCEEEEecCCCCCC-C-------hHHHHHHHHH--Hh-cCCCeEEEEecceeecCCC
Q 024143 134 LKWT--------------EATQKFPYVIFCAPPSRSL-D-------YPGDVRLAAL--SW-NGEGSFLFTSSSAIYDCSD 188 (272)
Q Consensus 134 ~~d~--------------~~~~~~D~Vi~~a~~~~~~-~-------~~~~~~~l~~--~~-~gvkr~V~~SS~~vYg~~~ 188 (272)
.+|. ++++++|+|||+|+..... + .+.++.+++. .. .++++|||+||.+|||...
T Consensus 90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~ 169 (491)
T PLN02996 90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKS 169 (491)
T ss_pred ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCC
Confidence 4442 1346899999999975432 1 1233344442 22 3688999999999998642
Q ss_pred C----CCCCCCC-C----------------------------------------CC----CCCCChHHHHHHHHHHHHHH
Q 024143 189 N----GACDEDS-P----------------------------------------VV----PIGRSPRTDVLLKAEKVILE 219 (272)
Q Consensus 189 ~----~~~~E~~-p----------------------------------------~~----p~~~~~y~~sk~~aE~~l~~ 219 (272)
+ .++++.. + .. ....+.|+.+|+.+|+++++
T Consensus 170 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~ 249 (491)
T PLN02996 170 GLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGN 249 (491)
T ss_pred ceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHH
Confidence 1 1111100 0 00 00126799999999999988
Q ss_pred cC----eeEEeeCceecCCCcHHH-------------HHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 220 FG----GCVLRLAGLYKADRGAHV-------------YWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 220 ~~----~~IlRp~~iyG~~~~~~~-------------~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+. .+|+||++|||+.+.++. ..+.+|.+ .++|++.+|+|||+|+++++++++
T Consensus 250 ~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~ 321 (491)
T PLN02996 250 FKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAM 321 (491)
T ss_pred hcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHH
Confidence 63 899999999998764321 11244543 478899999999999999998875
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.2e-21 Score=157.27 Aligned_cols=169 Identities=19% Similarity=0.190 Sum_probs=128.3
Q ss_pred EEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCCCCh
Q 024143 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSLDY 158 (272)
Q Consensus 87 IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~~~~ 158 (272)
|+|+|+ |++|+.++++|+++ |++|++++|++.+.+. ..+++.+.+|. +++.++|+||+++++...+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~--~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~-- 74 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR--GHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKD-- 74 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTH--
T ss_pred eEEECCCChHHHHHHHHHHHC--CCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhhhccc--
Confidence 789997 99999999999999 9999999999888765 56788777664 2578999999999875442
Q ss_pred HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEeeCceecCC
Q 024143 159 PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLYKAD 234 (272)
Q Consensus 159 ~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlRp~~iyG~~ 234 (272)
....++++ ....+++|+|++|+.++|+........+..+. + ..|...|.++|+.+++.+ ++++||+.+||+.
T Consensus 75 ~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~ 150 (183)
T PF13460_consen 75 VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPI-F---PEYARDKREAEEALRESGLNWTIVRPGWIYGNP 150 (183)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGG-G---HHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTT
T ss_pred ccccccccccccccccccceeeeccccCCCCCcccccccccc-h---hhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCC
Confidence 33444444 24568999999999999986533222222211 1 367889999999999887 9999999999987
Q ss_pred CcHHHHHHHcCccc-CCCCcccccccHHHHHHHHHHHhC
Q 024143 235 RGAHVYWLQKGTVD-SRPDHILNLIHYEVNTLVLFIAST 272 (272)
Q Consensus 235 ~~~~~~~l~~g~~~-~~~~~~~~~I~v~Dva~ai~~a~~ 272 (272)
... +... ..+....++|+++|+|++++.+++
T Consensus 151 ~~~-------~~~~~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 151 SRS-------YRLIKEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp SSS-------EEEESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred Ccc-------eeEEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence 431 1111 134556699999999999998863
|
... |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.6e-20 Score=166.91 Aligned_cols=188 Identities=21% Similarity=0.191 Sum_probs=133.3
Q ss_pred CCCeEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCCcch---hhhh---hCCceeeccCc-------cccCCCCEEEE
Q 024143 83 GENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHH---DELI---NMGITPSLKWT-------EATQKFPYVIF 148 (272)
Q Consensus 83 ~~~~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~---~~l~---~~~i~~~~~d~-------~~~~~~D~Vi~ 148 (272)
.+.+++||| +||+|+||+++|+++.+..+|++++..+... .+.. ...++...+|. .++.++ .|+|
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh 81 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH 81 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence 356899997 5999999999999993238999999876521 1111 22344444443 267788 8888
Q ss_pred ecCCCCCC------C-----hHHHHHHHHH--HhcCCCeEEEEecceeecCCCC-CCCCCCCCCCCCCCChHHHHHHHHH
Q 024143 149 CAPPSRSL------D-----YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDN-GACDEDSPVVPIGRSPRTDVLLKAE 214 (272)
Q Consensus 149 ~a~~~~~~------~-----~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~-~~~~E~~p~~p~~~~~y~~sk~~aE 214 (272)
|++..... + .+.++.+++. .+.++++|||+||.+|+..... ...+|+.|.......+|+.+|+.+|
T Consensus 82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE 161 (361)
T KOG1430|consen 82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE 161 (361)
T ss_pred eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence 88743211 1 3455566652 4678999999999999865433 3345555533222368999999999
Q ss_pred HHHHHcC------eeEEeeCceecCCCcH----HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 215 KVILEFG------GCVLRLAGLYKADRGA----HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 215 ~~l~~~~------~~IlRp~~iyG~~~~~----~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++++++. +++|||+.||||+... ....+.+|.. .++++++.++++++.++.+.+.|.
T Consensus 162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~ 231 (361)
T KOG1430|consen 162 KLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAA 231 (361)
T ss_pred HHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHH
Confidence 9999875 7999999999999753 2334566664 467789999999999999988764
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.4e-20 Score=159.14 Aligned_cols=181 Identities=19% Similarity=0.171 Sum_probs=129.6
Q ss_pred EEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccC-CCCEEEEecCCCCCCC-h----H
Q 024143 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQ-KFPYVIFCAPPSRSLD-Y----P 159 (272)
Q Consensus 87 IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~-~~D~Vi~~a~~~~~~~-~----~ 159 (272)
|+|||+ ||||++|+.+|.+. ||+|+.++|++.+........+.......+... ++|+|||+|+..-.+. | .
T Consensus 1 IliTGgTGlIG~~L~~~L~~~--gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~I~~rrWt~~~K 78 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG--GHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEPIAERRWTEKQK 78 (297)
T ss_pred CeEeccccchhHHHHHHHHhC--CCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCccccccCCHHHH
Confidence 689986 99999999999999 999999999987765432222221111123333 7999999999643222 2 1
Q ss_pred HH--------HHHH---H-HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc---C--e
Q 024143 160 GD--------VRLA---A-LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF---G--G 222 (272)
Q Consensus 160 ~~--------~~~l---~-~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~---~--~ 222 (272)
+. ++.+ + .+..+++.||--|.++.||...+..++|++|... .--++.....|+..+.+ + +
T Consensus 79 ~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~---~Fla~lc~~WE~~a~~a~~~gtRv 155 (297)
T COG1090 79 EEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGD---DFLAQLCQDWEEEALQAQQLGTRV 155 (297)
T ss_pred HHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCC---ChHHHHHHHHHHHHhhhhhcCceE
Confidence 11 1222 2 2355688999999999999988889999976433 34566777788776654 3 7
Q ss_pred eEEeeCceecCCCcHHH-----HHHHcCcccCCCCcccccccHHHHHHHHHHHhC
Q 024143 223 CVLRLAGLYKADRGAHV-----YWLQKGTVDSRPDHILNLIHYEVNTLVLFIAST 272 (272)
Q Consensus 223 ~IlRp~~iyG~~~~~~~-----~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~~ 272 (272)
+++|.|.|.++..+.+. +++.-|-.+++|.++++|||++|+++++..+++
T Consensus 156 vllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~ 210 (297)
T COG1090 156 VLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLE 210 (297)
T ss_pred EEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHh
Confidence 99999999998655322 234445556999999999999999999988763
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.5e-20 Score=179.31 Aligned_cols=184 Identities=17% Similarity=0.069 Sum_probs=122.8
Q ss_pred CeEEEEcC-cHHHHHHHHHHHh--cCCCCeEEEEecCCcch--hhhhh----CCceeeccCcc------------ccCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQ--EHPGCQIYGQTMTADHH--DELIN----MGITPSLKWTE------------ATQKF 143 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~--~~~g~~V~~~~R~~~~~--~~l~~----~~i~~~~~d~~------------~~~~~ 143 (272)
|+|||||+ ||||++|+++|++ + |++|++++|++... ..+.. ..++.+.+|.. .+.++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~--g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~~ 78 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRR--EATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGDI 78 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCC--CCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcCC
Confidence 48999996 9999999999994 6 99999999964321 11111 23455444421 13689
Q ss_pred CEEEEecCCCCCC-C-------hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC-CCCChHHHHHHH
Q 024143 144 PYVIFCAPPSRSL-D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP-IGRSPRTDVLLK 212 (272)
Q Consensus 144 D~Vi~~a~~~~~~-~-------~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p-~~~~~y~~sk~~ 212 (272)
|+|||||+..... . ..+...+++ ....++++|||+||.++||... .+.+|++...+ ...++|+++|++
T Consensus 79 D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~-~~~~e~~~~~~~~~~~~Y~~sK~~ 157 (657)
T PRK07201 79 DHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYE-GVFREDDFDEGQGLPTPYHRTKFE 157 (657)
T ss_pred CEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCcc-CccccccchhhcCCCCchHHHHHH
Confidence 9999999864321 1 123334444 2345789999999999998643 34556543221 112689999999
Q ss_pred HHHHHHHc-C--eeEEeeCceecCCCcH----------H---HHHHHcCc---c-cCCCCcccccccHHHHHHHHHHHh
Q 024143 213 AEKVILEF-G--GCVLRLAGLYKADRGA----------H---VYWLQKGT---V-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 213 aE~~l~~~-~--~~IlRp~~iyG~~~~~----------~---~~~l~~g~---~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+|+++++. + ++|+||+++||+.... + ...+.... + .+.+....+++|++|+++++..++
T Consensus 158 ~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~ 236 (657)
T PRK07201 158 AEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLM 236 (657)
T ss_pred HHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHh
Confidence 99999864 3 8999999999985320 1 11121111 1 234556789999999999998765
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-19 Score=162.43 Aligned_cols=172 Identities=15% Similarity=0.106 Sum_probs=118.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----CCceeeccCc-------cccCCCCEEEEecC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MGITPSLKWT-------EATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~~i~~~~~d~-------~~~~~~D~Vi~~a~ 151 (272)
.++|||||+ ||||++|+++|++++.+++|++++|+..+...+.. ..+..+.+|. ++++++|+|||+|+
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag 83 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAAA 83 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECcc
Confidence 478999996 99999999999998112799999987654332211 1344555553 24678999999998
Q ss_pred CCCCC----C----h---HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 024143 152 PSRSL----D----Y---PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVIL 218 (272)
Q Consensus 152 ~~~~~----~----~---~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~ 218 (272)
..... + + .....+++ ....++++||++||... ..|. ++|+.+|+.+|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~--------------~~p~--~~Y~~sK~~~E~l~~ 147 (324)
T TIGR03589 84 LKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA--------------ANPI--NLYGATKLASDKLFV 147 (324)
T ss_pred cCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC--------------CCCC--CHHHHHHHHHHHHHH
Confidence 64321 1 0 11223333 13457889999998531 2344 689999999999886
Q ss_pred Hc-------C--eeEEeeCceecCCCcH---HHHHHHcCc-c--cCCCCcccccccHHHHHHHHHHHh
Q 024143 219 EF-------G--GCVLRLAGLYKADRGA---HVYWLQKGT-V--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 219 ~~-------~--~~IlRp~~iyG~~~~~---~~~~l~~g~-~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+ + ++++||+++|||+... +...+..+. + +.++++.++|||++|++++++.++
T Consensus 148 ~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al 215 (324)
T TIGR03589 148 AANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSL 215 (324)
T ss_pred HHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHH
Confidence 42 3 7899999999987542 222344454 2 456788899999999999999876
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-19 Score=159.25 Aligned_cols=182 Identities=22% Similarity=0.227 Sum_probs=124.2
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhhhhhC----CceeeccCc---c----cc--CCCCEEEEec
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINM----GITPSLKWT---E----AT--QKFPYVIFCA 150 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~l~~~----~i~~~~~d~---~----~~--~~~D~Vi~~a 150 (272)
||||+|+ |+||++++++|+++ |++|++++|.... ...+... +++.+..|. + ++ .++|+|||+|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a 78 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES--GHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA 78 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC--CCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence 5899996 99999999999999 9999988764322 1111111 234444443 1 22 3799999999
Q ss_pred CCCCCC----C----h---HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024143 151 PPSRSL----D----Y---PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVI 217 (272)
Q Consensus 151 ~~~~~~----~----~---~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l 217 (272)
+..... + + .....+++ ....+++++|++||..+|+.....+++|+++..|. +.|+.+|..+|+++
T Consensus 79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~--~~y~~sK~~~e~~~ 156 (328)
T TIGR01179 79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPI--NPYGRSKLMSERIL 156 (328)
T ss_pred cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCC--CchHHHHHHHHHHH
Confidence 864211 1 1 11222333 13456889999999999987655688999988776 79999999999988
Q ss_pred HHc-----C--eeEEeeCceecCCCc-----------HHHH---HHH--cCc-c--------cCCCCcccccccHHHHHH
Q 024143 218 LEF-----G--GCVLRLAGLYKADRG-----------AHVY---WLQ--KGT-V--------DSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 218 ~~~-----~--~~IlRp~~iyG~~~~-----------~~~~---~l~--~g~-~--------~~~~~~~~~~I~v~Dva~ 265 (272)
+.+ + ++++||+.+||+... .+.. ... ... + ...++..++|||++|+++
T Consensus 157 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~ 236 (328)
T TIGR01179 157 RDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLAD 236 (328)
T ss_pred HHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHH
Confidence 753 3 899999999998521 1111 111 111 1 124567789999999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++.++
T Consensus 237 ~~~~~~ 242 (328)
T TIGR01179 237 AHLAAL 242 (328)
T ss_pred HHHHHH
Confidence 988775
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-18 Score=154.68 Aligned_cols=171 Identities=13% Similarity=0.072 Sum_probs=112.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCCCC-------
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSL------- 156 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~~~------- 156 (272)
|||||||+ ||||++|+++|.++ |++|+...++......+. .+.+ ..++|+|||||+.....
T Consensus 10 ~kiLVtG~tGfiG~~l~~~L~~~--g~~V~~~~~~~~~~~~v~--------~~l~-~~~~D~ViH~Aa~~~~~~~~~~~~ 78 (298)
T PLN02778 10 LKFLIYGKTGWIGGLLGKLCQEQ--GIDFHYGSGRLENRASLE--------ADID-AVKPTHVFNAAGVTGRPNVDWCES 78 (298)
T ss_pred CeEEEECCCCHHHHHHHHHHHhC--CCEEEEecCccCCHHHHH--------HHHH-hcCCCEEEECCcccCCCCchhhhh
Confidence 68999996 99999999999999 999986543322222111 1111 12789999999875311
Q ss_pred C---h----HHHHHHHHH--HhcCCCeEEEEecceeecCCC------CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC
Q 024143 157 D---Y----PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSD------NGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG 221 (272)
Q Consensus 157 ~---~----~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~------~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~ 221 (272)
+ + .....+++. ...+++ ++++||.+||+... +.+++|++++.+. .++|+.+|+.+|++++.+.
T Consensus 79 ~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~-~s~Yg~sK~~~E~~~~~y~ 156 (298)
T PLN02778 79 HKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFT-GSFYSKTKAMVEELLKNYE 156 (298)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCC-CCchHHHHHHHHHHHHHhh
Confidence 1 1 112233331 344675 66778888986432 2247777665432 2789999999999999876
Q ss_pred -eeEEeeCceecCCCc---HHHHHHHcCcc-cCCCCcccccccHHHHHHHHHHHh
Q 024143 222 -GCVLRLAGLYKADRG---AHVYWLQKGTV-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 -~~IlRp~~iyG~~~~---~~~~~l~~g~~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..++|+...+|++.. .+...+.+++. ...+ .+++|++|++++++.++
T Consensus 157 ~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~---~s~~yv~D~v~al~~~l 208 (298)
T PLN02778 157 NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIP---NSMTILDELLPISIEMA 208 (298)
T ss_pred ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcC---CCCEEHHHHHHHHHHHH
Confidence 788999888886532 23334444443 2112 37999999999998765
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.1e-18 Score=156.95 Aligned_cols=183 Identities=13% Similarity=0.120 Sum_probs=120.4
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCC--CeEEEEecCCcchh---hhhh--------------CCceeeccCc--------
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHD---ELIN--------------MGITPSLKWT-------- 137 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g--~~V~~~~R~~~~~~---~l~~--------------~~i~~~~~d~-------- 137 (272)
+|||||+ ||||++|+++|+++ | ++|++++|+.+... .+.. ..++.+.+|.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~--g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~ 78 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRR--STQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLS 78 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhC--CCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcC
Confidence 5899997 99999999999999 8 67999999865321 1110 2355555552
Q ss_pred -----cccCCCCEEEEecCCCCC-CCh-------HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC-
Q 024143 138 -----EATQKFPYVIFCAPPSRS-LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI- 201 (272)
Q Consensus 138 -----~~~~~~D~Vi~~a~~~~~-~~~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~- 201 (272)
....++|+|||+|+.... ..+ .....+++ ....++++|+|+||.++|+.....+..|+++..+.
T Consensus 79 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~ 158 (367)
T TIGR01746 79 DAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPP 158 (367)
T ss_pred HHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccc
Confidence 134689999999986432 111 22233333 23456788999999999976433334454433211
Q ss_pred --CCChHHHHHHHHHHHHHHc---C--eeEEeeCceecCCCc------HHHHHH-----HcCcccCCCC-cccccccHHH
Q 024143 202 --GRSPRTDVLLKAEKVILEF---G--GCVLRLAGLYKADRG------AHVYWL-----QKGTVDSRPD-HILNLIHYEV 262 (272)
Q Consensus 202 --~~~~y~~sk~~aE~~l~~~---~--~~IlRp~~iyG~~~~------~~~~~l-----~~g~~~~~~~-~~~~~I~v~D 262 (272)
..+.|+++|+.+|++++++ + ++++||+.+||+... .+..++ ..+. ..... ...+++|++|
T Consensus 159 ~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~vdd 237 (367)
T TIGR01746 159 PGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGA-YPDSPELTEDLTPVDY 237 (367)
T ss_pred cccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCC-CCCCCccccCcccHHH
Confidence 1268999999999998875 4 799999999997321 111111 2222 22223 3678999999
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
++++++.++
T Consensus 238 va~ai~~~~ 246 (367)
T TIGR01746 238 VARAIVALS 246 (367)
T ss_pred HHHHHHHHH
Confidence 999998764
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.1e-18 Score=158.19 Aligned_cols=171 Identities=14% Similarity=0.134 Sum_probs=119.8
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh------hhh--hCCceeeccCc---c----ccC----
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD------ELI--NMGITPSLKWT---E----ATQ---- 141 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~------~l~--~~~i~~~~~d~---~----~~~---- 141 (272)
..+++|+|||+ |+||++++++|+++ |++|++++|++.+.. .+. ..+++.+.+|. + .++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 135 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRR--GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD 135 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence 34679999996 99999999999999 999999999865321 111 12455555553 1 233
Q ss_pred CCCEEEEecCCCCC--CC-h---HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024143 142 KFPYVIFCAPPSRS--LD-Y---PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKA 213 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~--~~-~---~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~a 213 (272)
++|+||||++.... .+ + .....+++ ....++++||++||.++|+ |. ..|.++|...
T Consensus 136 ~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------p~--~~~~~sK~~~ 199 (390)
T PLN02657 136 PVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------PL--LEFQRAKLKF 199 (390)
T ss_pred CCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------------cc--hHHHHHHHHH
Confidence 69999999875321 11 1 22334444 2456899999999988753 12 4678899999
Q ss_pred HHHHHH--cC--eeEEeeCceecCCCcHHHHHHHcCcc---cCCCCcc-cccccHHHHHHHHHHHh
Q 024143 214 EKVILE--FG--GCVLRLAGLYKADRGAHVYWLQKGTV---DSRPDHI-LNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 214 E~~l~~--~~--~~IlRp~~iyG~~~~~~~~~l~~g~~---~~~~~~~-~~~I~v~Dva~ai~~a~ 271 (272)
|+.+++ .+ ++|+||+.+||+... ....+.+|.+ .++|+.. .++||++|+|++++.++
T Consensus 200 E~~l~~~~~gl~~tIlRp~~~~~~~~~-~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~ 264 (390)
T PLN02657 200 EAELQALDSDFTYSIVRPTAFFKSLGG-QVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCV 264 (390)
T ss_pred HHHHHhccCCCCEEEEccHHHhcccHH-HHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHH
Confidence 999886 44 899999999986432 2334556654 3566654 46899999999988775
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.9e-19 Score=154.68 Aligned_cols=178 Identities=17% Similarity=0.190 Sum_probs=97.8
Q ss_pred EEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch---hhh----------------hhCCceeeccCcc----------
Q 024143 89 IVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH---DEL----------------INMGITPSLKWTE---------- 138 (272)
Q Consensus 89 ItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~---~~l----------------~~~~i~~~~~d~~---------- 138 (272)
|||+ ||||++|+++|+++.+..+|+++.|..+.. +.+ ....++++.+|..
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 7997 999999999999993223999999986431 112 0234566666631
Q ss_pred ---ccCCCCEEEEecCCCCC----CC----hHHHHHHHHH-Hh-cCCCeEEEEecceeecCCCCCCCCC-------CCC-
Q 024143 139 ---ATQKFPYVIFCAPPSRS----LD----YPGDVRLAAL-SW-NGEGSFLFTSSSAIYDCSDNGACDE-------DSP- 197 (272)
Q Consensus 139 ---~~~~~D~Vi~~a~~~~~----~~----~~~~~~~l~~-~~-~gvkr~V~~SS~~vYg~~~~~~~~E-------~~p- 197 (272)
..+++|+|||||+.... .+ .+..+++++. +. .+.++|+|+||..+.+... ..+.| ...
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~-~~~~~~~~~~~~~~~~ 159 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRP-GTIEEKVYPEEEDDLD 159 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-T-TT--SSS-HHH--EEE
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCC-Ccccccccccccccch
Confidence 23689999999997442 11 3455666662 33 4567999999955554432 12211 111
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCc------H-HH----HHHHcCcc---cCCCCccccc
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG------A-HV----YWLQKGTV---DSRPDHILNL 257 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~------~-~~----~~l~~g~~---~~~~~~~~~~ 257 (272)
..+...++|.++|+.+|++++++ + ++|+||+.|+|.... . +. ..+..|.. .+.++...|+
T Consensus 160 ~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~ 239 (249)
T PF07993_consen 160 PPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDL 239 (249)
T ss_dssp --TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--E
T ss_pred hhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeE
Confidence 11122369999999999999876 3 899999999994321 1 11 12344443 2445667999
Q ss_pred ccHHHHHHHH
Q 024143 258 IHYEVNTLVL 267 (272)
Q Consensus 258 I~v~Dva~ai 267 (272)
++||.+|++|
T Consensus 240 vPVD~va~aI 249 (249)
T PF07993_consen 240 VPVDYVARAI 249 (249)
T ss_dssp EEHHHHHHHH
T ss_pred ECHHHHHhhC
Confidence 9999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-18 Score=152.38 Aligned_cols=183 Identities=16% Similarity=0.169 Sum_probs=131.2
Q ss_pred CeEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCCc-------chhhhhh--CCceeeccCc---c------ccCCCCE
Q 024143 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTAD-------HHDELIN--MGITPSLKWT---E------ATQKFPY 145 (272)
Q Consensus 85 ~~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~~-------~~~~l~~--~~i~~~~~d~---~------~~~~~D~ 145 (272)
++||||| +||||+|.+-+|+++ |+.|++++.=.. +...+.. ..+.++..|. + ...++|.
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~--gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~ 80 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKR--GYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDA 80 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhC--CCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCce
Confidence 5899998 599999999999999 999999986321 1122222 3466666553 2 1347999
Q ss_pred EEEecCCCCCCC-------h----HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC-CCCCChHHHHHH
Q 024143 146 VIFCAPPSRSLD-------Y----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV-PIGRSPRTDVLL 211 (272)
Q Consensus 146 Vi~~a~~~~~~~-------~----~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~-p~~~~~y~~sk~ 211 (272)
|+|.|+.....+ | .-+..+++ ..+.+++.+||.||+.|||.+..-|++|++|.. |. ++||++|.
T Consensus 81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~--~pyg~tK~ 158 (343)
T KOG1371|consen 81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPT--NPYGKTKK 158 (343)
T ss_pred EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCC--CcchhhhH
Confidence 999998644211 1 12223343 245679999999999999998778999999988 76 89999999
Q ss_pred HHHHHHHHcC------eeEEeeCceec--CC-C---cH---------HHHHHHcC---------cc--cCCCCccccccc
Q 024143 212 KAEKVILEFG------GCVLRLAGLYK--AD-R---GA---------HVYWLQKG---------TV--DSRPDHILNLIH 259 (272)
Q Consensus 212 ~aE~~l~~~~------~~IlRp~~iyG--~~-~---~~---------~~~~l~~g---------~~--~~~~~~~~~~I~ 259 (272)
..|+++.... .++||..+.+| |. + .+ ......-| .. ..+|+..+++||
T Consensus 159 ~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~ 238 (343)
T KOG1371|consen 159 AIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIH 238 (343)
T ss_pred HHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeeccee
Confidence 9999998764 68899999998 32 1 11 11111111 11 235688999999
Q ss_pred HHHHHHHHHHHh
Q 024143 260 YEVNTLVLFIAS 271 (272)
Q Consensus 260 v~Dva~ai~~a~ 271 (272)
+-|.|+..+.|+
T Consensus 239 v~Dla~~h~~al 250 (343)
T KOG1371|consen 239 VLDLADGHVAAL 250 (343)
T ss_pred eEehHHHHHHHh
Confidence 999999988875
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-18 Score=155.64 Aligned_cols=183 Identities=14% Similarity=0.087 Sum_probs=120.0
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc---hhhhh-------------hCCceeeccCcc---------
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH---HDELI-------------NMGITPSLKWTE--------- 138 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~---~~~l~-------------~~~i~~~~~d~~--------- 138 (272)
++||+||+ ||+|++|+.+|+.+. ..+|++++|..+. ...+. ...++++.+|..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~-~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRS-DAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcC-CCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 47999997 999999999999983 3599999997652 12221 123555555531
Q ss_pred ----ccCCCCEEEEecCCCCC--------CChHHHHHHHH-HHhc-CCCeEEEEecceeecCCCC----CCCCCCCCCCC
Q 024143 139 ----ATQKFPYVIFCAPPSRS--------LDYPGDVRLAA-LSWN-GEGSFLFTSSSAIYDCSDN----GACDEDSPVVP 200 (272)
Q Consensus 139 ----~~~~~D~Vi~~a~~~~~--------~~~~~~~~~l~-~~~~-gvkr~V~~SS~~vYg~~~~----~~~~E~~p~~p 200 (272)
..+.+|.|||+++..+. +..+.++.+++ .+.. +.|.|.|+||++|+..... .-.+|.+|..-
T Consensus 80 ~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~ 159 (382)
T COG3320 80 TWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRN 159 (382)
T ss_pred HHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccccc
Confidence 34579999999996431 11345556655 3444 4788999999999754311 11222233211
Q ss_pred C---CCChHHHHHHHHHHHHHHcC-----eeEEeeCceecCCCc------HHHHHHHcCcc----cCCCCcccccccHHH
Q 024143 201 I---GRSPRTDVLLKAEKVILEFG-----GCVLRLAGLYKADRG------AHVYWLQKGTV----DSRPDHILNLIHYEV 262 (272)
Q Consensus 201 ~---~~~~y~~sk~~aE~~l~~~~-----~~IlRp~~iyG~~~~------~~~~~l~~g~~----~~~~~~~~~~I~v~D 262 (272)
. ..++|++|||.+|.++++++ ++|+|||+|.|+.+. .+..++.++.. +.......+.+.+++
T Consensus 160 ~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~~~~~p~~~ 239 (382)
T COG3320 160 VGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSLDMLPVDH 239 (382)
T ss_pred ccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccchhhCccce
Confidence 1 13799999999999999985 899999999998652 34445554432 233355666666666
Q ss_pred HHHHHH
Q 024143 263 NTLVLF 268 (272)
Q Consensus 263 va~ai~ 268 (272)
+++++.
T Consensus 240 v~~~v~ 245 (382)
T COG3320 240 VARAVV 245 (382)
T ss_pred eeEEee
Confidence 665543
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.3e-17 Score=143.08 Aligned_cols=178 Identities=17% Similarity=0.093 Sum_probs=117.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--CCceeeccCc--------ccc-CCCCEEEEe
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT--------EAT-QKFPYVIFC 149 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--~~i~~~~~d~--------~~~-~~~D~Vi~~ 149 (272)
..|++|+|||+ |+||+.++++|+++ |++|++++|++++...+.. .+++++.+|. +.+ .++|+||++
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~ 92 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAK--GFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICA 92 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhC--CCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEEC
Confidence 34679999997 99999999999999 9999999998766443221 2355554442 134 589999999
Q ss_pred cCCCCC-CC------hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCC-CCCCCCChHHHHHHHHHHHHHH
Q 024143 150 APPSRS-LD------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP-VVPIGRSPRTDVLLKAEKVILE 219 (272)
Q Consensus 150 a~~~~~-~~------~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p-~~p~~~~~y~~sk~~aE~~l~~ 219 (272)
++.... .. ......+++ ....+++||||+||.++|+...+.+..+... ..+. ..|...|..+|+++++
T Consensus 93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~--~~~~~~k~~~e~~l~~ 170 (251)
T PLN00141 93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLF--GLTLVAKLQAEKYIRK 170 (251)
T ss_pred CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHH--HHHHHHHHHHHHHHHh
Confidence 875321 11 112233333 2356789999999999998543222222111 0111 2344578899999988
Q ss_pred cC--eeEEeeCceecCCCcHHHHHHHcCcc-c-CCCCcccccccHHHHHHHHHHHh
Q 024143 220 FG--GCVLRLAGLYKADRGAHVYWLQKGTV-D-SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 220 ~~--~~IlRp~~iyG~~~~~~~~~l~~g~~-~-~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+ ++++||+++|++... +.. . .......++|+++|+|++++.++
T Consensus 171 ~gi~~~iirpg~~~~~~~~--------~~~~~~~~~~~~~~~i~~~dvA~~~~~~~ 218 (251)
T PLN00141 171 SGINYTIVRPGGLTNDPPT--------GNIVMEPEDTLYEGSISRDQVAEVAVEAL 218 (251)
T ss_pred cCCcEEEEECCCccCCCCC--------ceEEECCCCccccCcccHHHHHHHHHHHh
Confidence 77 899999999986421 111 1 11112345899999999998876
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.7e-17 Score=163.85 Aligned_cols=155 Identities=19% Similarity=0.199 Sum_probs=110.9
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~~ 156 (272)
|||+|||+ ||||++++++|+++ |++|++++|+.... + ..+++.+.+|. ++++++|+|||||+.....
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~--G~~Vv~l~R~~~~~--~-~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~ 75 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ--GHEVVGIARHRPDS--W-PSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRN 75 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCchhh--c-ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccch
Confidence 48999996 99999999999999 99999999974321 1 12344444442 2467899999999864321
Q ss_pred C--hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEeeCce
Q 024143 157 D--YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGL 230 (272)
Q Consensus 157 ~--~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlRp~~i 230 (272)
. ......+++ +...++++|||+||.. |.++|+++.+++ ++|+||+++
T Consensus 76 ~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~---------------------------K~aaE~ll~~~gl~~vILRp~~V 128 (854)
T PRK05865 76 DHINIDGTANVLKAMAETGTGRIVFTSSGH---------------------------QPRVEQMLADCGLEWVAVRCALI 128 (854)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEECCcH---------------------------HHHHHHHHHHcCCCEEEEEeceE
Confidence 1 223344444 2356789999999842 788999998877 899999999
Q ss_pred ecCCCcHHHHHHHcCccc--CCCCcccccccHHHHHHHHHHHh
Q 024143 231 YKADRGAHVYWLQKGTVD--SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 231 yG~~~~~~~~~l~~g~~~--~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|||+...+...+...... +.++..++|||++|+|++++.++
T Consensus 129 YGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL 171 (854)
T PRK05865 129 FGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRAL 171 (854)
T ss_pred eCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHH
Confidence 999754333333322222 34456779999999999998775
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.8e-17 Score=155.85 Aligned_cols=188 Identities=16% Similarity=0.159 Sum_probs=124.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCC-CeEEEEecCCcch---hhhh------------------------hCCceee
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHH---DELI------------------------NMGITPS 133 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~---~~l~------------------------~~~i~~~ 133 (272)
..++|||||+ ||||++|+++|++..++ .+|+++.|.++.. +.+. ...+.++
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 5689999997 99999999999987333 3789999975432 1110 0123334
Q ss_pred ccCc---c----------ccCCCCEEEEecCCCCCC-Ch-------HHHHHHHHH-H-h-cCCCeEEEEecceeecCCCC
Q 024143 134 LKWT---E----------ATQKFPYVIFCAPPSRSL-DY-------PGDVRLAAL-S-W-NGEGSFLFTSSSAIYDCSDN 189 (272)
Q Consensus 134 ~~d~---~----------~~~~~D~Vi~~a~~~~~~-~~-------~~~~~~l~~-~-~-~gvkr~V~~SS~~vYg~~~~ 189 (272)
.+|. + ..+++|+|||+|+..... ++ +..+.+++. + . .+.++|||+||.+|||...
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~- 276 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQ- 276 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCC-
Confidence 4442 0 235799999999975432 21 233344442 2 2 3478999999999998753
Q ss_pred CCCCCCCCC-----------------------------------C----------------------CCCCChHHHHHHH
Q 024143 190 GACDEDSPV-----------------------------------V----------------------PIGRSPRTDVLLK 212 (272)
Q Consensus 190 ~~~~E~~p~-----------------------------------~----------------------p~~~~~y~~sk~~ 212 (272)
+.+.|..-. . ....+.|..+|..
T Consensus 277 G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~l 356 (605)
T PLN02503 277 GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAM 356 (605)
T ss_pred CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHH
Confidence 222222100 0 0012789999999
Q ss_pred HHHHHHHcC----eeEEeeCce----------ecCCCc---HHHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 213 AEKVILEFG----GCVLRLAGL----------YKADRG---AHVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 213 aE~~l~~~~----~~IlRp~~i----------yG~~~~---~~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+|+++++.. .+|+||+.| |+++.. +......+|.+ .++++...|+|+||.++.++++++
T Consensus 357 AE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~ 435 (605)
T PLN02503 357 GEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAM 435 (605)
T ss_pred HHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHH
Confidence 999999764 899999999 666522 22222345543 478899999999999999998873
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.5e-16 Score=136.84 Aligned_cols=167 Identities=17% Similarity=0.123 Sum_probs=113.0
Q ss_pred EEEEcC-cHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhh--------CCcee----eccCc-------cccC--CC
Q 024143 87 LLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN--------MGITP----SLKWT-------EATQ--KF 143 (272)
Q Consensus 87 IlItGa-GfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~--------~~i~~----~~~d~-------~~~~--~~ 143 (272)
|||||+ |.||+.|+++|++. + .+++.++|++.+...+.. ..+.. +.+|. ..++ ++
T Consensus 1 VLVTGa~GSIGseL~rql~~~--~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRY--GPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCC--B-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhc--CCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCC
Confidence 799996 99999999999998 5 489999999877654432 12322 24553 1455 99
Q ss_pred CEEEEecCCCCC---CC-h-------HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHH
Q 024143 144 PYVIFCAPPSRS---LD-Y-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (272)
Q Consensus 144 D~Vi~~a~~~~~---~~-~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk 210 (272)
|+|||+|+..+. ++ . +-+..+++ +...++++||++||.-. .+|. +.||.+|
T Consensus 79 diVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------v~Pt--nvmGatK 142 (293)
T PF02719_consen 79 DIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------VNPT--NVMGATK 142 (293)
T ss_dssp SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------SS----SHHHHHH
T ss_pred CEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------CCCC--cHHHHHH
Confidence 999999998653 11 1 12234444 24678999999999543 2355 8999999
Q ss_pred HHHHHHHHHcC---------eeEEeeCceecCCCc---HHHHHHHcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 211 LKAEKVILEFG---------GCVLRLAGLYKADRG---AHVYWLQKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 211 ~~aE~~l~~~~---------~~IlRp~~iyG~~~~---~~~~~l~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|+++..++ .+++|+|+|.|.... .|..++.+|.+ +.+++..+=|..++++++.++.|.
T Consensus 143 rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~ 217 (293)
T PF02719_consen 143 RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAA 217 (293)
T ss_dssp HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHH
Confidence 99999998864 589999999996543 35567888887 467888899999999999998775
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.8e-16 Score=137.98 Aligned_cols=159 Identities=14% Similarity=0.110 Sum_probs=107.4
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC---cc----cc------CC-CCEEEEec
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW---TE----AT------QK-FPYVIFCA 150 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d---~~----~~------~~-~D~Vi~~a 150 (272)
+|+|||+ |++|++++++|+++ |++|++++|++++... .+++....| .+ ++ .+ +|.|+|++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~--g~~V~~~~R~~~~~~~---~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~ 75 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA--SVPFLVASRSSSSSAG---PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVA 75 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC--CCcEEEEeCCCccccC---CCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeC
Confidence 5899997 99999999999999 9999999999875432 233333332 21 34 56 99999998
Q ss_pred CCCCCCChHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-C--eeEE
Q 024143 151 PPSRSLDYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-G--GCVL 225 (272)
Q Consensus 151 ~~~~~~~~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-~--~~Il 225 (272)
+.... ..+...+++ +...|++||||+||..++... + .+...|+++++. + ++++
T Consensus 76 ~~~~~--~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~------------~--------~~~~~~~~l~~~~gi~~til 133 (285)
T TIGR03649 76 PPIPD--LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG------------P--------AMGQVHAHLDSLGGVEYTVL 133 (285)
T ss_pred CCCCC--hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC------------c--------hHHHHHHHHHhccCCCEEEE
Confidence 75432 223334444 245789999999987653110 1 123456777775 6 8999
Q ss_pred eeCceecCCCcHH-HHHHH-cCccc-CCCCcccccccHHHHHHHHHHHh
Q 024143 226 RLAGLYKADRGAH-VYWLQ-KGTVD-SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 226 Rp~~iyG~~~~~~-~~~l~-~g~~~-~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
||+++|+.....+ ...+. .+.+. +.++..++|||++|+|+++..++
T Consensus 134 Rp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l 182 (285)
T TIGR03649 134 RPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRAL 182 (285)
T ss_pred eccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHh
Confidence 9999986532211 11122 23332 45788899999999999988775
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-15 Score=148.78 Aligned_cols=156 Identities=19% Similarity=0.153 Sum_probs=103.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc------cccCCCCEEEEecCCCCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT------EATQKFPYVIFCAPPSRSLD 157 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~------~~~~~~D~Vi~~a~~~~~~~ 157 (272)
|||||||+ ||||++|+++|+++ ||+|++++|.+... ...+++.+..|. +++.++|+|||+|+......
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~--G~~Vi~ldr~~~~~---~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~~~~ 75 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA--GHTVSGIAQHPHDA---LDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDTSAP 75 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCChhhc---ccCCceEEEccCCCHHHHHHhcCCCEEEEcCccCccch
Confidence 48999995 99999999999999 99999999865432 112445554443 24578999999998643221
Q ss_pred ---hHHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEeeCce
Q 024143 158 ---YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGL 230 (272)
Q Consensus 158 ---~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlRp~~i 230 (272)
+.....+++. ...|+ ++||+||. ||.. . .|. .+|+++..++ ++|+|++++
T Consensus 76 ~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~-------------~---~~~----~aE~ll~~~~~p~~ILR~~nV 132 (699)
T PRK12320 76 GGVGITGLAHVANAAARAGA-RLLFVSQA--AGRP-------------E---LYR----QAETLVSTGWAPSLVIRIAPP 132 (699)
T ss_pred hhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCC-------------c---ccc----HHHHHHHhcCCCEEEEeCcee
Confidence 2334455542 34566 79999986 3321 0 111 4788887764 899999999
Q ss_pred ecCCCcH----HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 231 YKADRGA----HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 231 yG~~~~~----~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
||++... +...+.+.. . ..+...+||++|++++++.++
T Consensus 133 YGp~~~~~~~r~I~~~l~~~--~-~~~pI~vIyVdDvv~alv~al 174 (699)
T PRK12320 133 VGRQLDWMVCRTVATLLRSK--V-SARPIRVLHLDDLVRFLVLAL 174 (699)
T ss_pred cCCCCcccHhHHHHHHHHHH--H-cCCceEEEEHHHHHHHHHHHH
Confidence 9996542 111111111 1 123445799999999998876
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.4e-15 Score=145.67 Aligned_cols=172 Identities=15% Similarity=0.129 Sum_probs=108.0
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEE-EEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC---CC-
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIY-GQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR---SL- 156 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~-~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~---~~- 156 (272)
.+|||||||+ ||||++|++.|.++ |++|. ...+ -.....+.. .. ...++|+|||||+... .+
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~--g~~v~~~~~~-l~d~~~v~~-----~i----~~~~pd~Vih~Aa~~~~~~~~~ 446 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQ--GIAYEYGKGR-LEDRSSLLA-----DI----RNVKPTHVFNAAGVTGRPNVDW 446 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhC--CCeEEeeccc-cccHHHHHH-----HH----HhhCCCEEEECCcccCCCCCCh
Confidence 3468999997 99999999999999 99984 3222 111111100 00 1127899999998652 11
Q ss_pred ---C-------hHHHHHHHHH--HhcCCCeEEEEecceeecCC------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 024143 157 ---D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCS------DNGACDEDSPVVPIGRSPRTDVLLKAEKVIL 218 (272)
Q Consensus 157 ---~-------~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~------~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~ 218 (272)
+ ......+++. ...+++ +|++||.+||+.. ...+++|++++.|. .+.||.+|+++|++++
T Consensus 447 ~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~-~~~Yg~sK~~~E~~~~ 524 (668)
T PLN02260 447 CESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFT-GSFYSKTKAMVEELLR 524 (668)
T ss_pred HHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCC-CChhhHHHHHHHHHHH
Confidence 1 1122334442 345674 7788999998642 12478888765542 2799999999999998
Q ss_pred HcC-eeEEeeCceecCC---CcHHHHHHHc-CcccCCCCcccccccHHHHHHHHHHHh
Q 024143 219 EFG-GCVLRLAGLYKAD---RGAHVYWLQK-GTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 219 ~~~-~~IlRp~~iyG~~---~~~~~~~l~~-g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++. ..++|+.++||.+ ...+...+.+ .+.+.-+ .+..+++|++.+++.++
T Consensus 525 ~~~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp---~~~~~~~~~~~~~~~l~ 579 (668)
T PLN02260 525 EYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIP---NSMTVLDELLPISIEMA 579 (668)
T ss_pred hhhhheEEEEEEecccCCCCccHHHHHHhccceeeccC---CCceehhhHHHHHHHHH
Confidence 876 7788999999643 2233333333 2322112 34677888887766554
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=135.68 Aligned_cols=171 Identities=15% Similarity=0.103 Sum_probs=128.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhh----h----CCceeeccCc-------cccCC--C
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELI----N----MGITPSLKWT-------EATQK--F 143 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~----~----~~i~~~~~d~-------~~~~~--~ 143 (272)
..++|||||+ |-||+.+++++++. +. +++.++|++.+...+. . ..+.++.+|. .++++ +
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~--~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv 326 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKF--NPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV 326 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhc--CCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence 5689999997 99999999999998 54 7888999887654332 2 2344555653 24565 9
Q ss_pred CEEEEecCCCCCCC----hHHHH-------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHH
Q 024143 144 PYVIFCAPPSRSLD----YPGDV-------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (272)
Q Consensus 144 D~Vi~~a~~~~~~~----~~~~~-------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk 210 (272)
|+|||+|+..+..- -.+.+ .+++ +.++|+++||.+||.-. .+|. |.||.+|
T Consensus 327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA--------------V~Pt--NvmGaTK 390 (588)
T COG1086 327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA--------------VNPT--NVMGATK 390 (588)
T ss_pred ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc--------------cCCc--hHhhHHH
Confidence 99999999766421 12332 3443 24679999999998532 3466 8999999
Q ss_pred HHHHHHHHHcC---------eeEEeeCceecCCCc---HHHHHHHcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 211 LKAEKVILEFG---------GCVLRLAGLYKADRG---AHVYWLQKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 211 ~~aE~~l~~~~---------~~IlRp~~iyG~~~~---~~~~~l~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|.+++.++ .+++|+|+|.|.... .|..++.+|.+ +.+++..+=|..+.|+++.++.|.
T Consensus 391 r~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~ 465 (588)
T COG1086 391 RLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAG 465 (588)
T ss_pred HHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHH
Confidence 99999998763 589999999997643 35567888887 478888998999999999988875
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.2e-14 Score=135.95 Aligned_cols=176 Identities=12% Similarity=0.057 Sum_probs=114.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---------------CCceeeccCc-------cc
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---------------MGITPSLKWT-------EA 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---------------~~i~~~~~d~-------~~ 139 (272)
..++|||+|+ |+||++++++|+++ |++|++++|+.++...+.. ..++.+.+|. ++
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~--G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 3467999997 99999999999999 9999999998776544321 1234455553 24
Q ss_pred cCCCCEEEEecCCCCCC--Ch-------HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHH
Q 024143 140 TQKFPYVIFCAPPSRSL--DY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~--~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (272)
+.++|+||||++..... ++ .....+++. ...+++|||++||.+++... ..+. .... ...|..
T Consensus 157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g----~p~~-~~~s--k~~~~~ 229 (576)
T PLN03209 157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG----FPAA-ILNL--FWGVLC 229 (576)
T ss_pred hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC----cccc-chhh--HHHHHH
Confidence 67899999999864321 11 122333432 34578999999998764211 0111 1111 246777
Q ss_pred HHHHHHHHHHHcC--eeEEeeCceecCCCcHHHHHHHcCcc-c-CCCCcccccccHHHHHHHHHHHh
Q 024143 209 VLLKAEKVILEFG--GCVLRLAGLYKADRGAHVYWLQKGTV-D-SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 209 sk~~aE~~l~~~~--~~IlRp~~iyG~~~~~~~~~l~~g~~-~-~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.|..+|+.+.+.+ +++||||+++++..... ..+.. . .........+..+|||++++.++
T Consensus 230 ~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~----~t~~v~~~~~d~~~gr~isreDVA~vVvfLa 292 (576)
T PLN03209 230 WKRKAEEALIASGLPYTIVRPGGMERPTDAYK----ETHNLTLSEEDTLFGGQVSNLQVAELMACMA 292 (576)
T ss_pred HHHHHHHHHHHcCCCEEEEECCeecCCccccc----cccceeeccccccCCCccCHHHHHHHHHHHH
Confidence 8999999999888 89999999997743211 01111 1 11111223588999999988754
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.3e-13 Score=119.70 Aligned_cols=173 Identities=9% Similarity=0.014 Sum_probs=110.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh------CCceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~------~~i~~~~~d~---~-----------~~~~ 142 (272)
++++||||+ |+||++++++|+++ |++|++++|++++.+.+.. ..+.....|. + .+.+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA--GANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 368999997 99999999999999 9999999998765543321 1233344442 1 2356
Q ss_pred CCEEEEecCCCCCC---C-----hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSL---D-----YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|+|||+++..... + +.+. ++.++ +...+++++|++||...+.... .
T Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~-----------~- 146 (255)
T TIGR01963 79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP-----------F- 146 (255)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC-----------C-
Confidence 89999999863321 1 1111 01111 1235678999999976554211 1
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHH-HHHc-Cc--------ccCCCCcccccccHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVY-WLQK-GT--------VDSRPDHILNLIHYEV 262 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~-~l~~-g~--------~~~~~~~~~~~I~v~D 262 (272)
.+.|+.+|...|.+++.+ + ++++||+.+|++....... .... +. ....+...++++|++|
T Consensus 147 -~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 225 (255)
T TIGR01963 147 -KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDE 225 (255)
T ss_pred -CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHH
Confidence 157888998888766542 3 6889999999875321111 1110 10 0122446678999999
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|++++.++
T Consensus 226 ~a~~~~~~~ 234 (255)
T TIGR01963 226 VAETALFLA 234 (255)
T ss_pred HHHHHHHHc
Confidence 999998876
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.8e-13 Score=116.63 Aligned_cols=174 Identities=10% Similarity=0.001 Sum_probs=110.0
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC--ceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~--i~~~~~d~---~-----------~~~ 141 (272)
.++++||||+ |+||++++++|.++ |++|+++.|++++.+.+. ..+ +..+..|. + ...
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARA--GAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3478999997 99999999999999 999999999875543322 222 33334442 1 123
Q ss_pred CCCEEEEecCCCCCCC--------hHH-------H----HHHHH--H-HhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPG-------D----VRLAA--L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~----~~~l~--~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.+|+||||++...... +.+ . ++.++ . ...+.+++|++||...+... .
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~-----------~ 152 (262)
T PRK13394 84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS-----------P 152 (262)
T ss_pred CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC-----------C
Confidence 5899999998643211 111 0 11122 1 33467899999996543211 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH-HHHHHc-C--------cccCCCCcccccccH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH-VYWLQK-G--------TVDSRPDHILNLIHY 260 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~-~~~l~~-g--------~~~~~~~~~~~~I~v 260 (272)
+. +.|+.+|...|.+++.+ + .+++||+.++++..... ...... + +.+..+....+|+++
T Consensus 153 ~~--~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (262)
T PRK13394 153 LK--SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTV 230 (262)
T ss_pred CC--cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCH
Confidence 12 57889999888776543 2 68899999998853211 111110 0 011234456789999
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|++++++.++
T Consensus 231 ~dva~a~~~l~ 241 (262)
T PRK13394 231 EDVAQTVLFLS 241 (262)
T ss_pred HHHHHHHHHHc
Confidence 99999988765
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3e-13 Score=117.53 Aligned_cols=173 Identities=11% Similarity=-0.030 Sum_probs=108.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C--CceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~--~i~~~~~d~---~-----------~~~~ 142 (272)
.++|+|||+ |+||++++++|+++ |++|++++|++++.+.+.. . .+..+.+|. + ...+
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKE--GAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999996 99999999999999 9999999998766543321 1 233444442 1 1247
Q ss_pred CCEEEEecCCCCCCC--------hHH-------H----HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~----~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|+|||+++...... +.+ . ++.++ +...+.++||++||...+... .+.
T Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~ 150 (258)
T PRK12429 82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS-----------AGK 150 (258)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC-----------CCc
Confidence 899999998543211 110 0 11121 123468899999998654321 112
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHc--Cc--------ccCCCCcccccccHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQK--GT--------VDSRPDHILNLIHYEV 262 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~--g~--------~~~~~~~~~~~I~v~D 262 (272)
+.|+.+|...|.+.+.+ + +.++||+.++++........... +. .........++++++|
T Consensus 151 --~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 228 (258)
T PRK12429 151 --AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEE 228 (258)
T ss_pred --chhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHH
Confidence 57888888888666543 2 67899999998753221111100 10 0112234567999999
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|++++.++
T Consensus 229 ~a~~~~~l~ 237 (258)
T PRK12429 229 IADYALFLA 237 (258)
T ss_pred HHHHHHHHc
Confidence 999987765
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.5e-13 Score=115.53 Aligned_cols=172 Identities=18% Similarity=0.125 Sum_probs=113.8
Q ss_pred EEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc--hhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCCC
Q 024143 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (272)
Q Consensus 87 IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~--~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~~ 156 (272)
|+|+|+ |.+|+++++.|++. +++|++++|++.+ ...+...|++.+..|. ++++++|.||.+.+.....
T Consensus 1 I~V~GatG~~G~~v~~~L~~~--~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~ 78 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSA--GFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPS 78 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCC
T ss_pred CEEECCccHHHHHHHHHHHhC--CCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhh
Confidence 789997 99999999999998 9999999998743 4566677888776653 2689999999888865422
Q ss_pred ChHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEeeCceec
Q 024143 157 DYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLYK 232 (272)
Q Consensus 157 ~~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlRp~~iyG 232 (272)
..+...+++ +.+.|+|+||+.|....+. +.....|. .+.-..|...|+.+++.+ ++++||+.++.
T Consensus 79 -~~~~~~~li~Aa~~agVk~~v~ss~~~~~~--------~~~~~~p~--~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e 147 (233)
T PF05368_consen 79 -ELEQQKNLIDAAKAAGVKHFVPSSFGADYD--------ESSGSEPE--IPHFDQKAEIEEYLRESGIPYTIIRPGFFME 147 (233)
T ss_dssp -HHHHHHHHHHHHHHHT-SEEEESEESSGTT--------TTTTSTTH--HHHHHHHHHHHHHHHHCTSEBEEEEE-EEHH
T ss_pred -hhhhhhhHHHhhhccccceEEEEEeccccc--------cccccccc--chhhhhhhhhhhhhhhccccceeccccchhh
Confidence 223333333 2456899999866544331 11111221 234467899999999988 99999998775
Q ss_pred CCCcHHHHH--HHcCc--c--cCCCCcccccc-cHHHHHHHHHHHh
Q 024143 233 ADRGAHVYW--LQKGT--V--DSRPDHILNLI-HYEVNTLVLFIAS 271 (272)
Q Consensus 233 ~~~~~~~~~--l~~g~--~--~~~~~~~~~~I-~v~Dva~ai~~a~ 271 (272)
.....+... +.... . .++++....++ ..+|+++++..++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il 193 (233)
T PF05368_consen 148 NLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAIL 193 (233)
T ss_dssp HHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHH
T ss_pred hhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHH
Confidence 321111110 12221 1 24556556665 9999999988775
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3e-12 Score=110.23 Aligned_cols=172 Identities=10% Similarity=-0.037 Sum_probs=107.4
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch-hhh----hh--CCceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DEL----IN--MGITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~-~~l----~~--~~i~~~~~d~---~-----------~ 139 (272)
+.|++|||||+ |+||++|+++|.++ |++|+++.|+..+. +.+ .. ..+..+.+|. + .
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARA--GADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH
Confidence 34578999997 99999999999999 99998877764432 111 11 1244444543 1 1
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
..++|+|||+++...... +.+.+ ..+. ....+.++||++||...|...
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~----------- 150 (249)
T PRK12825 82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW----------- 150 (249)
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC-----------
Confidence 247899999998533211 11111 1111 134568899999998876321
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH-HHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV-YWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~-~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
.+. ..|+.+|...|.+++.. + ++++||+.++++...... .......+ ......+++.+|+++++.
T Consensus 151 ~~~--~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dva~~~~ 225 (249)
T PRK12825 151 PGR--SNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDA---ETPLGRSGTPEDIARAVA 225 (249)
T ss_pred CCc--hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhc---cCCCCCCcCHHHHHHHHH
Confidence 112 57999998887666432 3 799999999998643211 11111110 112233899999999988
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 226 ~~~ 228 (249)
T PRK12825 226 FLC 228 (249)
T ss_pred HHh
Confidence 765
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.2e-12 Score=112.75 Aligned_cols=170 Identities=14% Similarity=0.003 Sum_probs=105.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D~ 145 (272)
++++||||+ |+||++++++|.++ |++|+++.|+++....+.. ..+..+.+|. + ...++|+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLAR--GDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 367999996 99999999999999 9999999998766554432 2344444442 1 1246899
Q ss_pred EEEecCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 146 Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
|||+++...... +.+ ....++ ....+.+++|++||...+.. ..+. +
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~--~ 146 (276)
T PRK06482 80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA-----------YPGF--S 146 (276)
T ss_pred EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC-----------CCCC--c
Confidence 999998643211 111 111111 12346789999999654211 1122 6
Q ss_pred hHHHHHHHHHHHHHHc-------C--eeEEeeCce---ecCCCcH---H-------HHHHHcCcccCCCCcccccccHHH
Q 024143 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGL---YKADRGA---H-------VYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~-------~--~~IlRp~~i---yG~~~~~---~-------~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
.|+.+|+..|.+++.+ + ++++||+.+ ||++... + ...+.+ ....+. ..-+.+++|
T Consensus 147 ~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~d~~~ 223 (276)
T PRK06482 147 LYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRR--ALADGS-FAIPGDPQK 223 (276)
T ss_pred hhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHH--HHhhcc-CCCCCCHHH
Confidence 8999999999776542 3 689999988 6654210 0 000000 001111 122468999
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
++++++.++
T Consensus 224 ~~~a~~~~~ 232 (276)
T PRK06482 224 MVQAMIASA 232 (276)
T ss_pred HHHHHHHHH
Confidence 999988875
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.9e-12 Score=113.42 Aligned_cols=169 Identities=18% Similarity=0.097 Sum_probs=120.8
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~~ 156 (272)
++|||+|+ |++|++++++|+++ |++|++.+|++++...+. .++++...|. ..++++|.++++.+....+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~--~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~ 77 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR--GHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGS 77 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC--CCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecccccc
Confidence 47999996 99999999999999 999999999999888776 7777776653 2578999999998854311
Q ss_pred C--hH---HHHHHHHH-HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEeeC
Q 024143 157 D--YP---GDVRLAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLA 228 (272)
Q Consensus 157 ~--~~---~~~~~l~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlRp~ 228 (272)
. .. ....+... ...++++++++|...... ..+ ..|.++|...|+.+.+.+ ++++|+.
T Consensus 78 ~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~------------~~~---~~~~~~~~~~e~~l~~sg~~~t~lr~~ 142 (275)
T COG0702 78 DAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADA------------ASP---SALARAKAAVEAALRSSGIPYTTLRRA 142 (275)
T ss_pred cchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCC------------CCc---cHHHHHHHHHHHHHHhcCCCeEEEecC
Confidence 1 11 11122221 123588899988755311 112 578999999999999998 7999987
Q ss_pred ceecCCCcHHH-HHHHcCcc-cCCCCcccccccHHHHHHHHHHHh
Q 024143 229 GLYKADRGAHV-YWLQKGTV-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 229 ~iyG~~~~~~~-~~l~~g~~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+|......+. ..+..+.+ ...+....+++.++|+++++..++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l 187 (275)
T COG0702 143 AFYLGAGAAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAAL 187 (275)
T ss_pred eeeeccchhHHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHh
Confidence 77765544322 23344444 233444789999999999887764
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.9e-12 Score=111.90 Aligned_cols=169 Identities=13% Similarity=0.049 Sum_probs=107.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhhCC--ceeeccCc---c----c-------cC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG--ITPSLKWT---E----A-------TQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~~~--i~~~~~d~---~----~-------~~ 141 (272)
+.++|+|||+ |+||++++++|+++ |++|++++|++++... +...+ +..+.+|. + . ..
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAAD--GAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 3468999996 99999999999999 9999999998654332 22222 44444443 1 1 23
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.+|+|||+++...... +.+.+ ..++ ....+.++||++||...++.. ..+
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~----------~~~ 152 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVG----------YPG 152 (251)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccC----------CCC
Confidence 7899999997643211 11111 1111 123467899999998765211 112
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH-----HHHHcCcccCCCCcccccccHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV-----YWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~-----~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
. ..|+.+|...|.+++.+ + .+++||+.++|+...... ..+..+. ....+++++|+|.+
T Consensus 153 ~--~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~ 224 (251)
T PRK12826 153 L--AHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAI------PLGRLGEPEDIAAA 224 (251)
T ss_pred c--cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcC------CCCCCcCHHHHHHH
Confidence 2 57999999888777653 3 688999999998643211 1111111 11258999999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++.++
T Consensus 225 ~~~l~ 229 (251)
T PRK12826 225 VLFLA 229 (251)
T ss_pred HHHHh
Confidence 87754
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.5e-12 Score=110.95 Aligned_cols=173 Identities=14% Similarity=0.060 Sum_probs=107.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc---c-------ccCCCCEEEEec
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-------ATQKFPYVIFCA 150 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~---~-------~~~~~D~Vi~~a 150 (272)
..++++|+|+ |+||+++++.|.++ |++|++++|++++...+.. .+......|. + ....+|+|||++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQR--GARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECC
Confidence 3468999997 99999999999999 9999999998766554432 2334444442 1 123689999999
Q ss_pred CCCCCCC--------hHHHH-------HHHH----H--HhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHH
Q 024143 151 PPSRSLD--------YPGDV-------RLAA----L--SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (272)
Q Consensus 151 ~~~~~~~--------~~~~~-------~~l~----~--~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (272)
+...... +.+.+ ..+. . ...+ .++||++||...|.... +. ..|+.
T Consensus 86 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~--~~y~~ 152 (245)
T PRK07060 86 GIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP-----------DH--LAYCA 152 (245)
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC-----------CC--cHhHH
Confidence 8643211 11111 1111 1 1222 47999999987654211 11 57999
Q ss_pred HHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 209 VLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 209 sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+|...|.+++.+ + .+.+||+.++++.... +...... ...........+++.+|+|++++.++
T Consensus 153 sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~a~~~~~l~ 224 (245)
T PRK07060 153 SKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKS-GPMLAAIPLGRFAEVDDVAAPILFLL 224 (245)
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHH-HHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 999999877643 3 6779999999875321 0000000 00001112345899999999998765
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.3e-12 Score=112.22 Aligned_cols=173 Identities=10% Similarity=-0.014 Sum_probs=105.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---CceeeccCc---c-----------ccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~i~~~~~d~---~-----------~~~~~D~ 145 (272)
+++++|||+ |+||++++++|.++ |++|++++|++++...+... .+..+..|. + ....+|+
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAA--GHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhC--cCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999997 99999999999999 99999999987766554332 233334442 1 1236899
Q ss_pred EEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
|||+|+...... +.+.+ ..+. ....+.+++|++||...+... .+. +
T Consensus 82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~-----------~~~--~ 148 (277)
T PRK06180 82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM-----------PGI--G 148 (277)
T ss_pred EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC-----------CCc--c
Confidence 999998643211 11111 1111 123456799999997754321 122 6
Q ss_pred hHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-----------HHHHHHcCcccCCCCcccccccHHHHH
Q 024143 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-----------HVYWLQKGTVDSRPDHILNLIHYEVNT 264 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-----------~~~~l~~g~~~~~~~~~~~~I~v~Dva 264 (272)
.|+.+|...|.+++.+ + ++++||+.++.+.... ...................++.++|+|
T Consensus 149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 228 (277)
T PRK06180 149 YYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAA 228 (277)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHH
Confidence 8999999888766542 3 7899999997652110 000000000000001123356799999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
++++.++
T Consensus 229 ~~~~~~l 235 (277)
T PRK06180 229 QAILAAV 235 (277)
T ss_pred HHHHHHH
Confidence 9998876
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.4e-12 Score=109.24 Aligned_cols=177 Identities=14% Similarity=0.123 Sum_probs=108.0
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h----CCceeeccCc---c----c-------c
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N----MGITPSLKWT---E----A-------T 140 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~----~~i~~~~~d~---~----~-------~ 140 (272)
.++++|||+ |.||+++++.|.++ |++|+++.|++++.+.+. . ..+..+.+|. + + .
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEA--GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 368999997 99999999999999 999999999876643321 1 1223334442 1 1 2
Q ss_pred CCCCEEEEecCCCCC------CC-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRS------LD-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~------~~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
..+|+|||+|+.... .+ +...+ +.++ +...+.+++|++||...+.... .+..|+.
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-~~~~~~~ 160 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPK-FEIYEGT 160 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhcccc-chhcccc
Confidence 348999999964211 00 11111 1111 1234678999999976543221 2233444
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
+..+. ..|+.+|...|.+.+.. + +++++|+.++.+....+........ ....+++.+|+|+++
T Consensus 161 ~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~~ 232 (256)
T PRK09186 161 SMTSP--VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCC------NGKGMLDPDDICGTL 232 (256)
T ss_pred ccCCc--chhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhcC------CccCCCCHHHhhhhH
Confidence 33222 47999999888876532 2 6889999988765332221111111 123478999999998
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 233 ~~l~ 236 (256)
T PRK09186 233 VFLL 236 (256)
T ss_pred hhee
Confidence 8765
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.3e-12 Score=107.74 Aligned_cols=164 Identities=12% Similarity=0.004 Sum_probs=105.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhhCCceeeccCc---c-----------ccCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMGITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~~~i~~~~~d~---~-----------~~~~~ 143 (272)
+.+++||+|+ |+||+++++.|+++ |++|++++|++.+... +...+.+....|. + ...++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAAR--GARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHC--CCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence 3478999997 99999999999999 9999999997655322 2223344433332 1 13478
Q ss_pred CEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
|+|||+++...... +.+.. ..++ ....+++++|++||...|+.. .+.
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~- 151 (239)
T PRK12828 84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG-----------PGM- 151 (239)
T ss_pred CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC-----------CCc-
Confidence 99999998532110 11111 1111 123568899999998876532 112
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..|+.+|...|.+++.. + +.++||+.++++.... ..+ ......+++++|+|+++..++
T Consensus 152 -~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~-------~~~---~~~~~~~~~~~dva~~~~~~l 218 (239)
T PRK12828 152 -GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA-------DMP---DADFSRWVTPEQIAAVIAFLL 218 (239)
T ss_pred -chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh-------cCC---chhhhcCCCHHHHHHHHHHHh
Confidence 57888998777666542 3 6789999999874211 000 112234799999999988765
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=8.4e-12 Score=110.24 Aligned_cols=173 Identities=10% Similarity=0.053 Sum_probs=106.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~ 141 (272)
.+++++|||+ |+||++++++|.++ |++|+++.|+.+....+. .. .+..+..|. + ...
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAA--GFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 3468999997 99999999999999 999999998765443321 11 233333442 1 134
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
++|+|||+++...... +.+.+ ..+. ....+..+||++||...|.... +
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~-----------~ 155 (274)
T PRK07775 87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP-----------H 155 (274)
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC-----------C
Confidence 7899999998643211 11111 1111 0123467899999987764320 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC-CCc--H--HHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA-DRG--A--HVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~-~~~--~--~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
. ..|+.+|...|.+++.+ + ++++|||.+..+ +.. . ....+..... ..+.....++|++|+|++
T Consensus 156 ~--~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~a 232 (274)
T PRK07775 156 M--GAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK-WGQARHDYFLRASDLARA 232 (274)
T ss_pred c--chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH-hcccccccccCHHHHHHH
Confidence 2 57999999999887653 3 688999987543 211 1 1101111000 112234669999999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++.++
T Consensus 233 ~~~~~ 237 (274)
T PRK07775 233 ITFVA 237 (274)
T ss_pred HHHHh
Confidence 98765
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.7e-12 Score=111.03 Aligned_cols=173 Identities=16% Similarity=0.122 Sum_probs=109.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c----c-------cCCCCEEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----A-------TQKFPYVIF 148 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~----~-------~~~~D~Vi~ 148 (272)
+++++|||+ |.||++++++|.++ |++|++++|++++.+.+...++..+.+|. + . ..++|+|||
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQ--GYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 468999997 99999999999999 99999999998777665545566555553 1 1 237899999
Q ss_pred ecCCCCCCC--------hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 149 CAPPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 149 ~a~~~~~~~--------~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
+++...... +... ++.++ ....+.+++|++||.+.+... |. ...|+
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~------------~~-~~~Y~ 147 (273)
T PRK06182 81 NAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT------------PL-GAWYH 147 (273)
T ss_pred CCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC------------CC-ccHhH
Confidence 998643211 1110 11121 124567899999996532110 11 14699
Q ss_pred HHHHHHHHHHHH-------cC--eeEEeeCceecCCCcHHHHHHHcCc---c-----------cCCCCcccccccHHHHH
Q 024143 208 DVLLKAEKVILE-------FG--GCVLRLAGLYKADRGAHVYWLQKGT---V-----------DSRPDHILNLIHYEVNT 264 (272)
Q Consensus 208 ~sk~~aE~~l~~-------~~--~~IlRp~~iyG~~~~~~~~~l~~g~---~-----------~~~~~~~~~~I~v~Dva 264 (272)
.+|...+.+.+. .+ ++++||+.+..+........+.... . .........+...+|+|
T Consensus 148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA 227 (273)
T PRK06182 148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIA 227 (273)
T ss_pred HHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHH
Confidence 999999876542 23 7899999998764211111111000 0 00111233467899999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
++++.++
T Consensus 228 ~~i~~~~ 234 (273)
T PRK06182 228 DAISKAV 234 (273)
T ss_pred HHHHHHH
Confidence 9998875
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.7e-12 Score=104.04 Aligned_cols=178 Identities=14% Similarity=0.112 Sum_probs=120.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec---cCc----cccCCCCEEEEecCCCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL---KWT----EATQKFPYVIFCAPPSRSL 156 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~---~d~----~~~~~~D~Vi~~a~~~~~~ 156 (272)
|||.|+|+ |.+|+.|+++.+++ ||+|++++|++.+.... .++.... +|+ +.+.+.|+||...+....+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R--GHeVTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~ 76 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR--GHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASD 76 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC--CCeeEEEEeChHhcccc--ccceeecccccChhhhHhhhcCCceEEEeccCCCCC
Confidence 68999997 99999999999999 99999999999887654 2333333 333 3578999999988765322
Q ss_pred C---hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHH--HHHHHcC---eeEEe
Q 024143 157 D---YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE--KVILEFG---GCVLR 226 (272)
Q Consensus 157 ~---~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE--~~l~~~~---~~IlR 226 (272)
. +.+..+.++ .+..+++|++.++..+...-.++ .--.++|..|. -.|...+..+| +.++.-. ||.+-
T Consensus 77 ~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g-~rLvD~p~fP~--ey~~~A~~~ae~L~~Lr~~~~l~WTfvS 153 (211)
T COG2910 77 NDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG-TRLVDTPDFPA--EYKPEALAQAEFLDSLRAEKSLDWTFVS 153 (211)
T ss_pred hhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC-ceeecCCCCch--hHHHHHHHHHHHHHHHhhccCcceEEeC
Confidence 1 344444444 24568999999987654321111 22234455555 35566777777 4455433 99999
Q ss_pred eCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 227 LAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 227 p~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
|+..+-|+...-.+++.+..... ...--++|...|-|-+++.-
T Consensus 154 Paa~f~PGerTg~yrlggD~ll~-n~~G~SrIS~aDYAiA~lDe 196 (211)
T COG2910 154 PAAFFEPGERTGNYRLGGDQLLV-NAKGESRISYADYAIAVLDE 196 (211)
T ss_pred cHHhcCCccccCceEeccceEEE-cCCCceeeeHHHHHHHHHHH
Confidence 99999987654444455444432 22234579999999888754
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-11 Score=106.56 Aligned_cols=171 Identities=10% Similarity=-0.031 Sum_probs=106.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC--ceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~--i~~~~~d~---~-----------~~~~ 142 (272)
+++|+|||+ |+||+++++.|.++ |++|+++.|++.+...+. ..+ +..+..|. + ....
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAAD--GAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 468999997 99999999999999 999999999876643322 112 33333442 1 1246
Q ss_pred CCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|+|||+++...... +.+.+ .++. +...+++++|++||...+.. ..+.
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~-----------~~~~ 151 (246)
T PRK05653 83 LDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG-----------NPGQ 151 (246)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC-----------CCCC
Confidence 799999998643211 11111 1111 12456789999998754221 1122
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..|+.+|...|...+.+ + .+++||+.++++....+...+.+... .......+++.+|+++++..++
T Consensus 152 --~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~~~ 226 (246)
T PRK05653 152 --TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEIL--KEIPLGRLGQPEEVANAVAFLA 226 (246)
T ss_pred --cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHH--hcCCCCCCcCHHHHHHHHHHHc
Confidence 57888998777665543 3 68899999999865422211111110 1112356788999999988765
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.2e-11 Score=108.02 Aligned_cols=174 Identities=12% Similarity=0.038 Sum_probs=105.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC----CceeeccCc---c-----------ccCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~----~i~~~~~d~---~-----------~~~~~ 143 (272)
+.+++||||+ |+||++++++|+++ |++|++++|+++..+.+... .+..+..|. + .+.++
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEA--GARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3478999997 99999999999999 99999999987655443321 223334442 1 12479
Q ss_pred CEEEEecCCC-CCCC--------hHHHH-----------HHHH--HHhcCC-CeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPS-RSLD--------YPGDV-----------RLAA--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 144 D~Vi~~a~~~-~~~~--------~~~~~-----------~~l~--~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
|+|||+++.. .... +.+.+ +.+. ....+. ++++++||...+... .+
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~-----------~~ 156 (264)
T PRK12829 88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY-----------PG 156 (264)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC-----------CC
Confidence 9999999865 2110 11111 1111 122344 678888875432110 01
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHH--cCcc-------cCCCCcccccccHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQ--KGTV-------DSRPDHILNLIHYEV 262 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~--~g~~-------~~~~~~~~~~I~v~D 262 (272)
. ..|+.+|...|.+++.. + ++++||++++++.......... .+.. .........+++++|
T Consensus 157 ~--~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (264)
T PRK12829 157 R--TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPED 234 (264)
T ss_pred C--chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHH
Confidence 1 46999999988877653 3 7889999999986432211100 0110 001112335899999
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|+++..++
T Consensus 235 ~a~~~~~l~ 243 (264)
T PRK12829 235 IAATALFLA 243 (264)
T ss_pred HHHHHHHHc
Confidence 999987664
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.1e-11 Score=107.31 Aligned_cols=172 Identities=10% Similarity=0.025 Sum_probs=106.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc---c-----------ccCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~---~-----------~~~~~ 143 (272)
.++++|||+ |.||++++++|.++ |++|+++.|+.+....... ..+.....|. + ...++
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFARE--GARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999997 99999999999999 9999999998665433221 1233444442 1 12478
Q ss_pred CEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceee-cCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIY-DCSDNGACDEDSPVVPI 201 (272)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vY-g~~~~~~~~E~~p~~p~ 201 (272)
|+|||+++...... +.+.+ +.++ ....+.+++|++||...+ +.. +.
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~------------~~ 150 (252)
T PRK06138 83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGR------------GR 150 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC------------Cc
Confidence 99999998643211 11100 1111 123467899999997543 321 11
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcc---cCCC-CcccccccHHHHHHHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTV---DSRP-DHILNLIHYEVNTLVLF 268 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~---~~~~-~~~~~~I~v~Dva~ai~ 268 (272)
+.|+.+|...|.+++.+ + ++++||+.++++.............. .... .....+++.+|++++++
T Consensus 151 --~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~ 228 (252)
T PRK06138 151 --AAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAAL 228 (252)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 57999999988877653 3 68899999998753221110000000 0011 11223789999999988
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
.++
T Consensus 229 ~l~ 231 (252)
T PRK06138 229 FLA 231 (252)
T ss_pred HHc
Confidence 765
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.6e-11 Score=106.00 Aligned_cols=166 Identities=9% Similarity=0.008 Sum_probs=97.8
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-chhhhh----h---CCceeeccCc---c----c-------cC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELI----N---MGITPSLKWT---E----A-------TQ 141 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-~~~~l~----~---~~i~~~~~d~---~----~-------~~ 141 (272)
++|||||+ |+||++++++|.++ |++|++++|+.. +.+.+. . ..+..+..|. + + +.
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAA--GYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 68999997 99999999999999 999999998632 222211 1 1234444443 1 1 24
Q ss_pred CCCEEEEecCCCCCCC--------hHHH-------HHHHHH-H----hcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGD-------VRLAAL-S----WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-------~~~l~~-~----~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
.+|+|||+++...... +.+. ...++. . ......++++++.. |..|..|.
T Consensus 85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 153 (249)
T PRK09135 85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH-----------AERPLKGY 153 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh-----------hcCCCCCc
Confidence 6899999998532110 1111 111111 0 11123455544321 22334444
Q ss_pred CCChHHHHHHHHHHHHHHc------C--eeEEeeCceecCCCcH----HH-HHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF------G--GCVLRLAGLYKADRGA----HV-YWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~------~--~~IlRp~~iyG~~~~~----~~-~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
+.|+.+|...|.+++.+ + ++++||+.++||.... .. .....+.+ ...+.+++|+|+++.
T Consensus 154 --~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~d~a~~~~ 225 (249)
T PRK09135 154 --PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTP------LKRIGTPEDIAEAVR 225 (249)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCC------cCCCcCHHHHHHHHH
Confidence 78999999999988753 2 6889999999987431 11 11111111 111235899999985
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
.++
T Consensus 226 ~~~ 228 (249)
T PRK09135 226 FLL 228 (249)
T ss_pred HHc
Confidence 543
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.8e-11 Score=106.40 Aligned_cols=168 Identities=14% Similarity=0.014 Sum_probs=106.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-------c-----cCCCCEEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-------A-----TQKFPYVIF 148 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-------~-----~~~~D~Vi~ 148 (272)
++|+|||+ |+||.++++.|.++ |++|++++|++++.+.+...+++.+.+|. + . ...+|.+||
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRR--GYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999997 99999999999999 99999999988776655545555554432 1 1 146799999
Q ss_pred ecCCCCCCC--------hHHHHH-------H----HH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 149 CAPPSRSLD--------YPGDVR-------L----AA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 149 ~a~~~~~~~--------~~~~~~-------~----l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
+++...... +.+.++ . ++ ....+.+++|++||...+... .. .+.|+
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~--~~~Y~ 147 (256)
T PRK08017 81 NAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIST-----------PG--RGAYA 147 (256)
T ss_pred CCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCC-----------CC--ccHHH
Confidence 998532111 111110 1 11 123467899999996432210 11 25899
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcC---ccc-CCCCcccccccHHHHHHHHHHHh
Q 024143 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKG---TVD-SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 208 ~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g---~~~-~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+|...|.+.+.+ + ++++||+.+..+- ...+..+ .+. ..+...+.+++.+|+++++..++
T Consensus 148 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~ 220 (256)
T PRK08017 148 ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRF----TDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHAL 220 (256)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccch----hhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHH
Confidence 9999999865532 2 6888998775432 1111111 111 12223356799999999998765
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2e-11 Score=103.99 Aligned_cols=166 Identities=14% Similarity=0.068 Sum_probs=101.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--CCceeeccCc---c----cc---CCCCEEEEec
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT---E----AT---QKFPYVIFCA 150 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--~~i~~~~~d~---~----~~---~~~D~Vi~~a 150 (272)
|++++|||+ |+||+++++.|+++ ++|++++|++.+.+.+.. .+++.+.+|. + ++ .++|+|||++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~---~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~a 79 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT---HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNA 79 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh---CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECC
Confidence 578999996 99999999999876 889999998766544332 2455555553 1 22 3699999999
Q ss_pred CCCCCC---C-----hHHH-----------HHHHHH-HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHH
Q 024143 151 PPSRSL---D-----YPGD-----------VRLAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (272)
Q Consensus 151 ~~~~~~---~-----~~~~-----------~~~l~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk 210 (272)
+..... + +.+. .+.++. ...+.+++|++||...++... +. ..|+.+|
T Consensus 80 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~-----------~~--~~y~~~K 146 (227)
T PRK08219 80 GVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANP-----------GW--GSYAASK 146 (227)
T ss_pred CcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCC-----------CC--chHHHHH
Confidence 864321 0 1111 111111 122457999999987654221 12 5789999
Q ss_pred HHHHHHHHHcC--------eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 211 LKAEKVILEFG--------GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 211 ~~aE~~l~~~~--------~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
...|.+++... +..++|+.+.++.... +..+. +.......+++++|++++++.++
T Consensus 147 ~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~----~~~~~--~~~~~~~~~~~~~dva~~~~~~l 209 (227)
T PRK08219 147 FALRALADALREEEPGNVRVTSVHPGRTDTDMQRG----LVAQE--GGEYDPERYLRPETVAKAVRFAV 209 (227)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEecCCccchHhhh----hhhhh--ccccCCCCCCCHHHHHHHHHHHH
Confidence 98887666431 4556666554432111 11111 01112245899999999998876
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.6e-11 Score=104.85 Aligned_cols=174 Identities=9% Similarity=-0.047 Sum_probs=107.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc---c-----------ccCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~---~-----------~~~~ 142 (272)
..++++|||+ |+||++++++|+++ |++|++++|++++...+.. ..+..+.+|. + ....
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAE--GARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 3468999997 99999999999999 9999999999766544321 1233444443 1 1246
Q ss_pred CCEEEEecCCCCC-C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 143 ~D~Vi~~a~~~~~-~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
+|+|||+++.... . + +.+.+ +.++ ....+.++||++||...+... .+
T Consensus 82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~ 150 (251)
T PRK07231 82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR-----------PG 150 (251)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC-----------CC
Confidence 8999999986321 1 0 11111 1111 123467899999998776432 12
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHH--HcCcccCCCCcccccccHHHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWL--QKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l--~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
. +.|+.+|...+.+.+.+ + ++.+||+.+..+......... ..............+++++|+|++++.
T Consensus 151 ~--~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 228 (251)
T PRK07231 151 L--GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALF 228 (251)
T ss_pred c--hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence 2 57999998888766543 2 678999988665322111000 000001111223457899999999887
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
++
T Consensus 229 l~ 230 (251)
T PRK07231 229 LA 230 (251)
T ss_pred Hh
Confidence 65
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-11 Score=106.87 Aligned_cols=171 Identities=14% Similarity=0.026 Sum_probs=107.0
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~~ 142 (272)
+++|||||+ |+||+++++.|+++ |++|++++|++.+.+.+. .. .+..+..|. + ...+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~--g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA--GAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999997 99999999999999 999999999865543321 11 233333442 1 1237
Q ss_pred CCEEEEecCCCCCC------C---hHHHHH-------HHHH-----HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSL------D---YPGDVR-------LAAL-----SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~------~---~~~~~~-------~l~~-----~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|+||||++..... + +.+.+. .++. ...+.+++|++||...|... .+.
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~ 147 (263)
T PRK06181 79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV-----------PTR 147 (263)
T ss_pred CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC-----------CCc
Confidence 89999999864321 1 111111 1111 02245789999998776421 112
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCccc-CCCCcccccccHHHHHHHHHHHh
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVD-SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~-~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.|+.+|...|.+.+.. + +++++|+.+..+...... -..+.+. ..+.....+++++|+|++++.++
T Consensus 148 --~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~ 223 (263)
T PRK06181 148 --SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRAL--DGDGKPLGKSPMQESKIMSAEECAEAILPAI 223 (263)
T ss_pred --cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhc--cccccccccccccccCCCCHHHHHHHHHHHh
Confidence 58999999988876542 2 678999998765432110 0112221 12223347899999999998765
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.5e-11 Score=106.57 Aligned_cols=174 Identities=12% Similarity=0.010 Sum_probs=100.9
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhh----hhhC--CceeeccCc---c-----------ccCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINM--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~----l~~~--~i~~~~~d~---~-----------~~~~ 142 (272)
++++|||+ |+||++++++|.++ |++|++++|+... .+. +... .+..+.+|. + ...+
T Consensus 7 k~vlItGasggiG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 7 KTALVTGSSRGIGADTAKILAGA--GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred cEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 68999997 99999999999999 9999999987532 222 2211 233444442 1 1246
Q ss_pred CCEEEEecCCCCCC-----C----hHHHHHHHH---HHh-cCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHH
Q 024143 143 FPYVIFCAPPSRSL-----D----YPGDVRLAA---LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~-----~----~~~~~~~l~---~~~-~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~s 209 (272)
+|+|||+++..... . ......+++ ... ...+++|++||...+... ..+.. |. .++|+.+
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~----~~~~~---~~-~~~Y~~s 156 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP----TVKTM---PE-YEPVARS 156 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc----cccCC---cc-ccHHHHH
Confidence 89999999753211 0 111112222 111 223589999996432111 01111 11 2689999
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcc--c-CCCCcccccccHHHHHHHHHHHh
Q 024143 210 LLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTV--D-SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~--~-~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|...|.+++.+ + +++++|+.+-++-...+ +.+..+ . ........+++++|+|++++.++
T Consensus 157 K~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 227 (248)
T PRK07806 157 KRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATL---LNRLNPGAIEARREAAGKLYTVSEFAAEVARAV 227 (248)
T ss_pred HHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhh---hccCCHHHHHHHHhhhcccCCHHHHHHHHHHHh
Confidence 99999988764 2 56677776655421111 111111 0 00011236899999999998765
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.5e-12 Score=106.16 Aligned_cols=176 Identities=14% Similarity=0.111 Sum_probs=114.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCC--eEEEEecCC-cchhhhhhCCceeeccCcc---ccCCCCEEEEecCCCCC-
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTA-DHHDELINMGITPSLKWTE---ATQKFPYVIFCAPPSRS- 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~--~V~~~~R~~-~~~~~l~~~~i~~~~~d~~---~~~~~D~Vi~~a~~~~~- 155 (272)
|+||||+|. |.+|++|.+.+.+. +. +=.++..+. ..+..+ .|.+ ...++..|||+|+.-..
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q--~~~~e~wvf~~skd~DLt~~---------a~t~~lF~~ekPthVIhlAAmVGGl 69 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQ--GFDDENWVFIGSKDADLTNL---------ADTRALFESEKPTHVIHLAAMVGGL 69 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhc--CCCCcceEEeccccccccch---------HHHHHHHhccCCceeeehHhhhcch
Confidence 579999985 99999999999988 54 222222221 111111 1111 23478899999975221
Q ss_pred -------CChHHH-H---HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCC----CCCCCCCChHHHHHHHHHHHHH
Q 024143 156 -------LDYPGD-V---RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS----PVVPIGRSPRTDVLLKAEKVIL 218 (272)
Q Consensus 156 -------~~~~~~-~---~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~----p~~p~~~~~y~~sk~~aE~~l~ 218 (272)
-+|... + .+++ +-..|++++|+..|+.+|.+....|++|.. |+.|. ...|+..|..+.-.-+
T Consensus 70 f~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphps-N~gYsyAKr~idv~n~ 148 (315)
T KOG1431|consen 70 FHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPS-NFGYSYAKRMIDVQNQ 148 (315)
T ss_pred hhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCC-chHHHHHHHHHHHHHH
Confidence 112111 1 2233 235799999999999999987778999986 44454 2367777766554333
Q ss_pred H----cC--eeEEeeCceecCCCcH----------HHHHH----HcCc----ccCCCCcccccccHHHHHHHHHHHh
Q 024143 219 E----FG--GCVLRLAGLYKADRGA----------HVYWL----QKGT----VDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 219 ~----~~--~~IlRp~~iyG~~~~~----------~~~~l----~~g~----~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
. .| ++.+-|.++|||..+. +.+++ ..|. .++.|...+.|||++|+|++++..+
T Consensus 149 aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vl 225 (315)
T KOG1431|consen 149 AYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVL 225 (315)
T ss_pred HHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHH
Confidence 3 34 6888999999997541 12221 2333 2688999999999999999998765
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2e-11 Score=107.98 Aligned_cols=135 Identities=13% Similarity=0.116 Sum_probs=93.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c--------c----cCCCCEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E--------A----TQKFPYVI 147 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~--------~----~~~~D~Vi 147 (272)
+++|+|||+ |.||++++++|.++ |++|++++|++++...+...+++.+..|. + . ...+|+||
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~--G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSD--GWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 467999997 99999999999999 99999999998877766655666655553 1 1 13689999
Q ss_pred EecCCCCCCC--------hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 148 FCAPPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 148 ~~a~~~~~~~--------~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
|+|+...... +.+. ++.++ +...+.+++|++||...+.. ..+. +.|
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~-----------~~~~--~~Y 148 (277)
T PRK05993 82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP-----------MKYR--GAY 148 (277)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC-----------CCcc--chH
Confidence 9998543211 1110 11222 13456789999999654321 1122 689
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 207 ~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
+.+|+..|.+.+.+ + +++++||.+-.+
T Consensus 149 ~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 149 NASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 99999999876543 3 688999988654
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.1e-11 Score=107.63 Aligned_cols=172 Identities=9% Similarity=0.024 Sum_probs=104.6
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--------CCceeeccCc---c----------ccCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWT---E----------ATQK 142 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--------~~i~~~~~d~---~----------~~~~ 142 (272)
+++||||+ |+||+++++.|.++ |++|++++|+++..+.+.. ..++.+..|. + ....
T Consensus 4 k~~lItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKK--GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 57999996 99999999999999 9999999998765543321 1234444442 1 1246
Q ss_pred CCEEEEecCCCCCC---C-----hHHH-------H----HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSL---D-----YPGD-------V----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~~-------~----~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|+||||++..... + +.+. . +.++ +...+.+++|++||...+... .+.
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~ 150 (280)
T PRK06914 82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF-----------PGL 150 (280)
T ss_pred eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC-----------CCC
Confidence 89999999854321 1 1110 0 1111 123457899999996543211 112
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHH----HHHc-C-------cccC-CCCccccccc
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVY----WLQK-G-------TVDS-RPDHILNLIH 259 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~----~l~~-g-------~~~~-~~~~~~~~I~ 259 (272)
+.|+.+|...|.+++.. + ++++||+.++.+....... .... . .+.. .......+++
T Consensus 151 --~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (280)
T PRK06914 151 --SPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGN 228 (280)
T ss_pred --chhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCC
Confidence 57999999988876643 3 7899999998763210000 0000 0 0000 0112245789
Q ss_pred HHHHHHHHHHHh
Q 024143 260 YEVNTLVLFIAS 271 (272)
Q Consensus 260 v~Dva~ai~~a~ 271 (272)
++|+|++++.++
T Consensus 229 ~~dva~~~~~~~ 240 (280)
T PRK06914 229 PIDVANLIVEIA 240 (280)
T ss_pred HHHHHHHHHHHH
Confidence 999999998775
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.8e-11 Score=108.10 Aligned_cols=171 Identities=13% Similarity=-0.004 Sum_probs=105.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---CceeeccCc---c-----------ccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~i~~~~~d~---~-----------~~~~~D~ 145 (272)
+++|||||+ |+||++++++|.++ |++|++++|++++...+... .+..+..|. + ....+|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALER--GDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 367999996 99999999999999 99999999987665443321 233333332 1 1347899
Q ss_pred EEEecCCCCCCC--------hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
||||++...... +.+. ++.++ ....+.+++|++||...+.... . .+
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~--~~ 147 (275)
T PRK08263 81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP-----------M--SG 147 (275)
T ss_pred EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC-----------C--cc
Confidence 999998643211 1111 11111 1234678999999987664321 1 15
Q ss_pred hHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH---------HHHHHcCcccCCCCccccc-ccHHHHHH
Q 024143 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH---------VYWLQKGTVDSRPDHILNL-IHYEVNTL 265 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~---------~~~l~~g~~~~~~~~~~~~-I~v~Dva~ 265 (272)
.|+.+|+..|.+.+.+ + ++++||+.+..+..... ...+.. . .........+ +..+|+++
T Consensus 148 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~p~dva~ 225 (275)
T PRK08263 148 IYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLRE-E-LAEQWSERSVDGDPEAAAE 225 (275)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHH-H-HHHHHHhccCCCCHHHHHH
Confidence 7999999988766442 3 78999998875532100 000100 0 0111122334 88999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++.++
T Consensus 226 ~~~~l~ 231 (275)
T PRK08263 226 ALLKLV 231 (275)
T ss_pred HHHHHH
Confidence 988775
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.6e-11 Score=103.11 Aligned_cols=169 Identities=9% Similarity=0.061 Sum_probs=106.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----CCceeeccCc---c----c-------cCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MGITPSLKWT---E----A-------TQKFP 144 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~~i~~~~~d~---~----~-------~~~~D 144 (272)
+++++|||+ |+||+.+++.|.++ |++|++++|++++.+.+.. ..++.+..|. + . ..++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA--GDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 357999997 99999999999999 9999999998766543322 2344444442 1 1 23689
Q ss_pred EEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
+|||+++...... +...+ +.+. ....+.+++|++||...+.. . ..
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~-------~~-- 145 (257)
T PRK07074 80 VLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-----L-------GH-- 145 (257)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-----C-------CC--
Confidence 9999998643211 11111 1111 12345678999999643211 0 01
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH----HHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----VYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~----~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
..|+.+|...|.+++.+ + +.++||+.++++..... ....... .......++++++|++++++.+
T Consensus 146 ~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~d~a~~~~~l 222 (257)
T PRK07074 146 PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEEL---KKWYPLQDFATPDDVANAVLFL 222 (257)
T ss_pred cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHH---HhcCCCCCCCCHHHHHHHHHHH
Confidence 36889999988877654 2 57899999988742110 0011100 0122346799999999999877
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 223 ~ 223 (257)
T PRK07074 223 A 223 (257)
T ss_pred c
Confidence 5
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.6e-11 Score=106.81 Aligned_cols=171 Identities=14% Similarity=0.039 Sum_probs=104.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--------CCceeeccCc---c----c-------c
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWT---E----A-------T 140 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--------~~i~~~~~d~---~----~-------~ 140 (272)
.+++||||+ |+||+++++.|.++ |++|++++|++++.+.+.. ..+..+..|. + . .
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAA--GAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478999997 99999999999999 9999999998655433211 1223333342 1 1 2
Q ss_pred CCCCEEEEecCCCCC----C--C---hHHHH-------HHHH----H--HhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRS----L--D---YPGDV-------RLAA----L--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~----~--~---~~~~~-------~~l~----~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
..+|+|||+++.... . + +.+.+ ..++ . ...+.+++|++||...+...
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------- 153 (276)
T PRK05875 85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH----------- 153 (276)
T ss_pred CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC-----------
Confidence 378999999984321 0 1 11111 1111 1 12345699999998765321
Q ss_pred CCCCCChHHHHHHHHHHHHHHcC---------eeEEeeCceecCCCcHHHH--HHHcCcccCCCCcccccccHHHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKADRGAHVY--WLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~~---------~~IlRp~~iyG~~~~~~~~--~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
.+. +.|+.+|...|.+++.+. ++++||+.+.++....... .... . .........+++++|+|+++
T Consensus 154 ~~~--~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~dva~~~ 229 (276)
T PRK05875 154 RWF--GAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSA-D-YRACTPLPRVGEVEDVANLA 229 (276)
T ss_pred CCC--cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHH-H-HHcCCCCCCCcCHHHHHHHH
Confidence 112 689999999999887542 6889999887653211100 0000 0 00111233467899999998
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 230 ~~l~ 233 (276)
T PRK05875 230 MFLL 233 (276)
T ss_pred HHHc
Confidence 8765
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.9e-11 Score=101.67 Aligned_cols=164 Identities=13% Similarity=0.074 Sum_probs=103.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C--CceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~--~i~~~~~d~---~-----------~~~~ 142 (272)
.++++|||+ |+||++++++|.++ |++|++++|++.....+.. . .+..+..|. + ....
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALARE--GASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 468999997 99999999999999 9999999998655433221 1 233333442 1 1246
Q ss_pred CCEEEEecCCCCC---C-----C---hHHHH-------HHHH---H---HhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRS---L-----D---YPGDV-------RLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 143 ~D~Vi~~a~~~~~---~-----~---~~~~~-------~~l~---~---~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
+|+|||+++.... . . +.+.+ .++. . ...+.+++|++||..+|..
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------ 151 (250)
T PRK07774 84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY------------ 151 (250)
T ss_pred CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC------------
Confidence 8999999986321 0 0 11111 0111 0 1234679999999887631
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-----HHHHHHcCcccCCCCcccccccHHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-----HVYWLQKGTVDSRPDHILNLIHYEVNT 264 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-----~~~~l~~g~~~~~~~~~~~~I~v~Dva 264 (272)
. +.|+.+|+..|.+++.+ + .++++|+.+..+.... ....+.++.+ ..-+.+++|+|
T Consensus 152 --~--~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~d~a 221 (250)
T PRK07774 152 --S--NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIP------LSRMGTPEDLV 221 (250)
T ss_pred --c--cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCC------CCCCcCHHHHH
Confidence 2 57999999999887654 2 6889999887664321 1111222221 11246789999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
++++.++
T Consensus 222 ~~~~~~~ 228 (250)
T PRK07774 222 GMCLFLL 228 (250)
T ss_pred HHHHHHh
Confidence 9987764
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.5e-11 Score=105.18 Aligned_cols=171 Identities=12% Similarity=0.018 Sum_probs=102.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEE-EecCCcchhhh----hhC--CceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYG-QTMTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~-~~R~~~~~~~l----~~~--~i~~~~~d~---~-----------~~~ 141 (272)
+++++|||+ |+||++++++|.++ |++|+. ..|+..+.+.+ ... .+..+.+|. + ...
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~--g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEE--GYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 368999996 99999999999999 999876 46765443322 111 233444442 1 123
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.+|+|||+++...... +...+ +.+. ....+.++||++||...+.. ..+
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~ 150 (250)
T PRK08063 82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY-----------LEN 150 (250)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----------CCC
Confidence 6899999998533211 11110 1111 12345679999999765421 112
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH--HHHHcCcccCCCCcccccccHHHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV--YWLQKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~--~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
. ..|+.+|...|.+++.+ + +++++|+.+..+....+. ..+... . ........+++.+|+|++++.
T Consensus 151 ~--~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~dva~~~~~ 226 (250)
T PRK08063 151 Y--TTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLED-A-RAKTPAGRMVEPEDVANAVLF 226 (250)
T ss_pred c--cHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHH-H-hcCCCCCCCcCHHHHHHHHHH
Confidence 2 58999999999987653 2 678999999765421110 000000 0 000112237899999999887
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
++
T Consensus 227 ~~ 228 (250)
T PRK08063 227 LC 228 (250)
T ss_pred Hc
Confidence 65
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.2e-11 Score=103.65 Aligned_cols=136 Identities=11% Similarity=0.013 Sum_probs=90.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh------CCceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~------~~i~~~~~d~---~-----------~~~~ 142 (272)
++++||||+ |+||++++++|+++ |++|++++|+.++...+.. ..+..+..|. + ...+
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEE--GAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 578999996 99999999999999 9999999998765443321 1234444442 1 1246
Q ss_pred CCEEEEecCCCCCCC--------hHHHH-------HHH----H--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-------~~l----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|+|||+++...... +.+.+ ..+ . +...+.+++|++||...|.... ..
T Consensus 81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~-----------~~ 149 (250)
T TIGR03206 81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS-----------GE 149 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC-----------CC
Confidence 899999998532111 11111 111 1 1234568999999988765321 11
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
..|+.+|++.|.+++.+ + ++++||+.++++.
T Consensus 150 --~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~ 189 (250)
T TIGR03206 150 --AVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL 189 (250)
T ss_pred --chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence 57999998887766543 3 7899999998774
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.6e-11 Score=103.73 Aligned_cols=174 Identities=13% Similarity=-0.013 Sum_probs=106.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC--ceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~--i~~~~~d~---~-----------~~~ 141 (272)
..++++|||+ |.||++++++|.++ |++|++.+|++++.+.+ ...+ +..+..|. + ...
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARR--GARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 3468999996 99999999999999 99999999986654432 2222 33334442 1 124
Q ss_pred CCCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.+|+|||+|+..... + +.+.+ +.++ ....+ .+++|++||...|... .
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~-----------~ 151 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN-----------A 151 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC-----------C
Confidence 689999999863211 1 11110 1111 11233 5789999998765321 1
Q ss_pred CCCCChHHHHHHH----HHHHHHHc---C--eeEEeeCceecCCCcHHHHHH----Hc-Ccc--cCCCCcccccccHHHH
Q 024143 200 PIGRSPRTDVLLK----AEKVILEF---G--GCVLRLAGLYKADRGAHVYWL----QK-GTV--DSRPDHILNLIHYEVN 263 (272)
Q Consensus 200 p~~~~~y~~sk~~----aE~~l~~~---~--~~IlRp~~iyG~~~~~~~~~l----~~-g~~--~~~~~~~~~~I~v~Dv 263 (272)
+. +.|+.+|.. +|.+..++ + +++++|+.+.++......... .. ... .+......++++++|+
T Consensus 152 ~~--~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 229 (275)
T PRK05876 152 GL--GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDI 229 (275)
T ss_pred CC--chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHH
Confidence 22 679999986 55555444 3 688999999876432111000 00 000 1222345678999999
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
|+.++.++
T Consensus 230 a~~~~~ai 237 (275)
T PRK05876 230 AQLTADAI 237 (275)
T ss_pred HHHHHHHH
Confidence 99998876
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=5e-11 Score=103.72 Aligned_cols=173 Identities=10% Similarity=0.010 Sum_probs=105.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh------CCceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~------~~i~~~~~d~---~-----------~~~~ 142 (272)
.++++|||+ |+||+++++.|.++ |++|++++|++.+.+.+.. ..+..+..|. + .+..
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARA--GADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 368999996 99999999999999 9999999998765443321 1233344432 1 1247
Q ss_pred CCEEEEecCCCCC-C---C-----hHHHH-------HHHH---HH--hcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRS-L---D-----YPGDV-------RLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~-~---~-----~~~~~-------~~l~---~~--~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|+|||+++.... . + +.+.+ ..+. .. ....+++|++||...+... .+.
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~ 151 (258)
T PRK07890 83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQ-----------PKY 151 (258)
T ss_pred ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCC-----------CCc
Confidence 8999999985321 1 1 11111 0111 01 1123689999997654221 122
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCc--c-------cCCCCcccccccHHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGT--V-------DSRPDHILNLIHYEVN 263 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~--~-------~~~~~~~~~~I~v~Dv 263 (272)
..|+.+|...|.+++.+ + ..++||+.++++....+...+.++. . .........+.+++|+
T Consensus 152 --~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 229 (258)
T PRK07890 152 --GAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEV 229 (258)
T ss_pred --chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHH
Confidence 57999999988877653 2 6789999999986332211111100 0 0011122346789999
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
+++++.++
T Consensus 230 a~a~~~l~ 237 (258)
T PRK07890 230 ASAVLFLA 237 (258)
T ss_pred HHHHHHHc
Confidence 99987654
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.5e-11 Score=104.56 Aligned_cols=169 Identities=10% Similarity=-0.014 Sum_probs=100.9
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE-ecCCcchhh----hhhC--CceeeccCc---c----cc---------
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDE----LINM--GITPSLKWT---E----AT--------- 140 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~-~R~~~~~~~----l~~~--~i~~~~~d~---~----~~--------- 140 (272)
++++|||+ |+||++++++|.++ |++|+++ .|+.++... +... .+..+..|. + ++
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~--G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLAND--GALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 68999996 99999999999999 9999875 566544322 2111 233444442 1 11
Q ss_pred ----CCCCEEEEecCCCCCCC--------hHHHHH-------HHH---H-HhcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 141 ----QKFPYVIFCAPPSRSLD--------YPGDVR-------LAA---L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 141 ----~~~D~Vi~~a~~~~~~~--------~~~~~~-------~l~---~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
.++|+|||+++...... +...++ +++ . .....+++|++||..+|...
T Consensus 85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~---------- 154 (254)
T PRK12746 85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF---------- 154 (254)
T ss_pred ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC----------
Confidence 26899999998643211 111110 111 1 11234689999998876421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcc---cCCCCcccccccHHHHHH
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTV---DSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ 265 (272)
.+. +.|+.+|...|.+++.. + +++++|+.++++-..... ..... .........+++++|+++
T Consensus 155 -~~~--~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~ 228 (254)
T PRK12746 155 -TGS--IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLL---DDPEIRNFATNSSVFGRIGQVEDIAD 228 (254)
T ss_pred -CCC--cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhc---cChhHHHHHHhcCCcCCCCCHHHHHH
Confidence 112 57999999998776442 2 688999999887432110 00000 001112234678999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
++..++
T Consensus 229 ~~~~l~ 234 (254)
T PRK12746 229 AVAFLA 234 (254)
T ss_pred HHHHHc
Confidence 987654
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.8e-11 Score=102.74 Aligned_cols=172 Identities=10% Similarity=-0.025 Sum_probs=106.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D~ 145 (272)
.++++|||+ |+||+++++.|.++ |++|+.++|+.++...+.. ..+..+..|. + ....+|+
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAE--GARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 367999996 99999999999999 9999999998766544332 1233444442 1 1347899
Q ss_pred EEEecCCCCCC--------ChHHHH-------HHHH------HHhcC-CCeEEEEeccee-ecCCCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRSL--------DYPGDV-------RLAA------LSWNG-EGSFLFTSSSAI-YDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 146 Vi~~a~~~~~~--------~~~~~~-------~~l~------~~~~g-vkr~V~~SS~~v-Yg~~~~~~~~E~~p~~p~~ 202 (272)
+||+++..... ++.+.+ ..++ ....+ ..++|++||... ++. .+.
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~- 150 (257)
T PRK07067 84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE------------ALV- 150 (257)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC------------CCC-
Confidence 99999853211 111111 1111 01112 358999999642 221 122
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHc------Cc---ccCCCCcccccccHHHHH
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQK------GT---VDSRPDHILNLIHYEVNT 264 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~------g~---~~~~~~~~~~~I~v~Dva 264 (272)
..|+.+|...|.+.+.. + .+++||+.++++........+.+ +. .+..+.....+++.+|+|
T Consensus 151 -~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 229 (257)
T PRK07067 151 -SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLT 229 (257)
T ss_pred -chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHH
Confidence 57999999888776543 3 68899999998743211100100 00 122334456789999999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
++++.++
T Consensus 230 ~~~~~l~ 236 (257)
T PRK07067 230 GMALFLA 236 (257)
T ss_pred HHHHHHh
Confidence 9987654
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.3e-11 Score=102.34 Aligned_cols=136 Identities=16% Similarity=0.106 Sum_probs=88.6
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch---hhhhhCC--ceeeccCc---c-----------ccC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH---DELINMG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~---~~l~~~~--i~~~~~d~---~-----------~~~ 141 (272)
+..++++|||+ |+||++++++|.++ |++|++++|++... ..+...+ +..+..|. + ...
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAE--GARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG 83 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 34578999997 99999999999999 99999999974321 1121222 22333332 1 134
Q ss_pred CCCEEEEecCCCC---C-CC-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSR---S-LD-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~---~-~~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.+|++||+|+... . .+ +.+.+ +.++ ....+.+++|++||...|+.
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------- 150 (260)
T PRK12823 84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------------- 150 (260)
T ss_pred CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-------------
Confidence 7899999997421 1 01 11111 1111 12345679999999876531
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
+. .+|+.+|...|.+.+.+ + +.+++|+++++|.
T Consensus 151 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T PRK12823 151 NR--VPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP 192 (260)
T ss_pred CC--CccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence 11 46999999999877653 3 6889999999874
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-11 Score=107.05 Aligned_cols=167 Identities=16% Similarity=0.111 Sum_probs=113.5
Q ss_pred EEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-chhhhhhC---C-ceeeccC---c----cccCCCCEEEEecCCCC
Q 024143 88 LIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELINM---G-ITPSLKW---T----EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 88 lItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-~~~~l~~~---~-i~~~~~d---~----~~~~~~D~Vi~~a~~~~ 154 (272)
-|.|| ||+|+.++.+|.+. |-+|+.--|..+ ....++.. | +-+..+| . ++.+...+||++.+..-
T Consensus 65 TVFGAtGFlGryvvnklak~--GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGrd~ 142 (391)
T KOG2865|consen 65 TVFGATGFLGRYVVNKLAKM--GSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGRDY 142 (391)
T ss_pred EEecccccccHHHHHHHhhc--CCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecccc
Confidence 35597 99999999999999 999999888633 33333322 2 2222233 2 25678899999998532
Q ss_pred C------CC-hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--ee
Q 024143 155 S------LD-YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (272)
Q Consensus 155 ~------~~-~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~ 223 (272)
. .| +...-+.++ .+..|+.|||++|+.+. + + ..+ +-|-++|.++|..+++.- .|
T Consensus 143 eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga---n----v-----~s~---Sr~LrsK~~gE~aVrdafPeAt 207 (391)
T KOG2865|consen 143 ETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA---N----V-----KSP---SRMLRSKAAGEEAVRDAFPEAT 207 (391)
T ss_pred ccCCcccccccchHHHHHHHHHHhhChhheeehhhccc---c----c-----cCh---HHHHHhhhhhHHHHHhhCCcce
Confidence 1 11 122223332 24668999999998762 1 1 112 567889999999999863 99
Q ss_pred EEeeCceecCCCcHHHHHH---H-cCcc--cCCC-CcccccccHHHHHHHHHHHh
Q 024143 224 VLRLAGLYKADRGAHVYWL---Q-KGTV--DSRP-DHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 224 IlRp~~iyG~~~~~~~~~l---~-~g~~--~~~~-~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+||+.|||.....+.++. . -|.+ ++.| +..-..|||-|||.+|+.|+
T Consensus 208 IirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAv 262 (391)
T KOG2865|consen 208 IIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAV 262 (391)
T ss_pred eechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhc
Confidence 9999999998765544332 2 2322 3444 46677999999999999886
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.4e-11 Score=101.55 Aligned_cols=173 Identities=10% Similarity=-0.020 Sum_probs=102.0
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-cchhh----hhhCC--ceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE----LINMG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~~~----l~~~~--i~~~~~d~---~-----------~~~ 141 (272)
+++|||||+ |+||++++++|.++ |++|+...|.. ..... +...+ +..+..|. + ...
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKE--GSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 478999996 99999999999999 99998877642 22211 11111 22222332 1 134
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-----------HHHHHHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
.+|+|||+++...... +.+.. +.+.......++||++||...|... .+.
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~- 151 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPA-----------YGL- 151 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCC-----------CCc-
Confidence 7899999998532211 11110 0111111223689999998876421 123
Q ss_pred CChHHHHHHHHHHHHHHc------C--eeEEeeCceecCCCcHHHHHHH--cCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 203 RSPRTDVLLKAEKVILEF------G--GCVLRLAGLYKADRGAHVYWLQ--KGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~------~--~~IlRp~~iyG~~~~~~~~~l~--~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.|+.+|...|.+++.+ + ..+++|+.+.++.......... .............+++++|+|++++.++
T Consensus 152 -~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~ 229 (252)
T PRK06077 152 -SIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAIL 229 (252)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHh
Confidence 68999999999887753 2 5778999887653211110000 0000011112346899999999998876
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2e-11 Score=113.87 Aligned_cols=189 Identities=15% Similarity=0.165 Sum_probs=121.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCC-eEEEEecCCcchh---hhh------------h------CCceeeccCc--
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHD---ELI------------N------MGITPSLKWT-- 137 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~---~l~------------~------~~i~~~~~d~-- 137 (272)
..++|||||+ ||+|.-+++.|+...|.. +++.+.|.++..+ .+. + ..+.++.+|.
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~ 90 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE 90 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence 4578999996 999999999999875543 7888888754321 111 0 1122333332
Q ss_pred -c----------ccCCCCEEEEecCCCCCCC-h-------HHHHHHHH---HHhcCCCeEEEEecceeecCC---CCCCC
Q 024143 138 -E----------ATQKFPYVIFCAPPSRSLD-Y-------PGDVRLAA---LSWNGEGSFLFTSSSAIYDCS---DNGAC 192 (272)
Q Consensus 138 -~----------~~~~~D~Vi~~a~~~~~~~-~-------~~~~~~l~---~~~~gvkr~V~~SS~~vYg~~---~~~~~ 192 (272)
+ ..+++|+|||+|+....++ + ..+.++++ ......+-|||+||..+.-.. ...++
T Consensus 91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y 170 (467)
T KOG1221|consen 91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPY 170 (467)
T ss_pred cccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccccccccc
Confidence 1 3568999999999865443 1 12223333 233467899999999875111 01111
Q ss_pred CCCC-----------------------C-CCCCCCChHHHHHHHHHHHHHHcC----eeEEeeCceecCCCcHHHHHH--
Q 024143 193 DEDS-----------------------P-VVPIGRSPRTDVLLKAEKVILEFG----GCVLRLAGLYKADRGAHVYWL-- 242 (272)
Q Consensus 193 ~E~~-----------------------p-~~p~~~~~y~~sk~~aE~~l~~~~----~~IlRp~~iyG~~~~~~~~~l-- 242 (272)
.+.. | +.+...+.|.-+|+.+|+++.+.. .+|+||+.|...-..|+..|+
T Consensus 171 ~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn 250 (467)
T KOG1221|consen 171 PMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDN 250 (467)
T ss_pred CccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCcccc
Confidence 1111 0 011112567889999999998764 899999999887655544332
Q ss_pred -----------HcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 243 -----------QKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 243 -----------~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+|.+ ..+++...++|.||.++.+++++.
T Consensus 251 ~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~ 293 (467)
T KOG1221|consen 251 LNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASA 293 (467)
T ss_pred CCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHH
Confidence 34433 467889999999999999988654
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.2e-11 Score=102.84 Aligned_cols=168 Identities=13% Similarity=0.023 Sum_probs=105.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC--ceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~--i~~~~~d~---~-----------~~~ 141 (272)
..+++||||+ |+||+.++++|+++ |++|++++|++++...+ ...+ +..+..|. + ...
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQA--GAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 3478999996 99999999999999 99999999987654332 2212 33333342 1 134
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.+|+|||+++...... +.+.+ ..+. ....+.+++|++||...+... .+
T Consensus 87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----------~~ 155 (255)
T PRK07523 87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR-----------PG 155 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC-----------CC
Confidence 6899999998643211 11111 0111 112457899999996543211 11
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
.+.|+.+|...|.+++.+ + +.++||+.+.++.... ...++.+.. ....+...+|+|+
T Consensus 156 --~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~ 227 (255)
T PRK07523 156 --IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRT------PAGRWGKVEELVG 227 (255)
T ss_pred --CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcC------CCCCCcCHHHHHH
Confidence 268999999998887654 3 6789999998874321 111222211 1233678999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++.++
T Consensus 228 ~~~~l~ 233 (255)
T PRK07523 228 ACVFLA 233 (255)
T ss_pred HHHHHc
Confidence 987654
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.4e-11 Score=104.53 Aligned_cols=123 Identities=13% Similarity=-0.024 Sum_probs=78.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC--ceeeccCc---c----c-------cC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E----A-------TQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~--i~~~~~d~---~----~-------~~ 141 (272)
.++++||||+ |+||++++++|.++ |++|++++|+.+..... ...+ +..+.+|. + + ..
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAAL--GMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3478999996 99999999999999 99999999976554332 1112 33344443 1 1 23
Q ss_pred CCCEEEEecCCCCCCC--------hHHH-------H----HHHH--HHhcCC------CeEEEEecceeecCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGD-------V----RLAA--LSWNGE------GSFLFTSSSAIYDCSDNGACDE 194 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-------~----~~l~--~~~~gv------kr~V~~SS~~vYg~~~~~~~~E 194 (272)
.+|+|||+|+...... +... . +.++ ....+. +++|++||...|...
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------- 155 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP------- 155 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-------
Confidence 5899999998643211 1100 1 1111 112222 589999998766421
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHc
Q 024143 195 DSPVVPIGRSPRTDVLLKAEKVILEF 220 (272)
Q Consensus 195 ~~p~~p~~~~~y~~sk~~aE~~l~~~ 220 (272)
.+. +.|+.+|...|.+++.+
T Consensus 156 ----~~~--~~Y~~sK~a~~~~~~~l 175 (287)
T PRK06194 156 ----PAM--GIYNVSKHAVVSLTETL 175 (287)
T ss_pred ----CCC--cchHHHHHHHHHHHHHH
Confidence 112 57999999999887653
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-10 Score=100.67 Aligned_cols=173 Identities=14% Similarity=0.082 Sum_probs=101.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh------CCceeeccCc---c----ccC-CCCEEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E----ATQ-KFPYVIF 148 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~------~~i~~~~~d~---~----~~~-~~D~Vi~ 148 (272)
+++|||||+ |.||+++++.|.++ |++|++++|++.+...+.. ..+..+..|. + ++. ++|+|||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~ 79 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK--GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLN 79 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEE
Confidence 468999997 99999999999999 9999999998655443321 1234444442 1 233 8999999
Q ss_pred ecCCCCCCC--------hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 149 CAPPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 149 ~a~~~~~~~--------~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
+++...... +... .+.++ ....+.+++|++||...+... + . ...|+
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~---------~--~--~~~Y~ 146 (257)
T PRK09291 80 NAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG---------P--F--TGAYC 146 (257)
T ss_pred CCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC---------C--C--cchhH
Confidence 998643211 1110 11111 123456899999997533211 0 1 25799
Q ss_pred HHHHHHHHHHHH-------cC--eeEEeeCceecCCCcH----HHHHHHcCc--c-cCCCCcccccccHHHHHHHHHHHh
Q 024143 208 DVLLKAEKVILE-------FG--GCVLRLAGLYKADRGA----HVYWLQKGT--V-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 208 ~sk~~aE~~l~~-------~~--~~IlRp~~iyG~~~~~----~~~~l~~g~--~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+|...|.+.+. .+ ++++||+.+.-+.... ...+..... . ........+++..+|+++.++..+
T Consensus 147 ~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 226 (257)
T PRK09291 147 ASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVI 226 (257)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHh
Confidence 999999876543 24 7899998764321110 011111111 0 011122334578888887776654
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.2e-10 Score=100.76 Aligned_cols=167 Identities=13% Similarity=-0.001 Sum_probs=105.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~~ 142 (272)
.++++|||+ |.||+++++.|.++ |++|++++|++++...+. .. .+..+..|. + ...+
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEA--GATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 378999997 99999999999999 999999999876544322 11 234444442 1 1257
Q ss_pred CCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|+|||+++...... +.+.+ ..+. ....+.+++|++||...+.... ..
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~ 153 (250)
T PRK12939 85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP-----------KL 153 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC-----------Cc
Confidence 999999998643211 11111 0111 1123456999999976543210 11
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-----HHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-----HVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-----~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
..|+.+|...|.+++.. + +..++|+.+..+.... +...+.. ......+++.+|+|+++
T Consensus 154 --~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~ 225 (250)
T PRK12939 154 --GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLK------GRALERLQVPDDVAGAV 225 (250)
T ss_pred --chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHh------cCCCCCCCCHHHHHHHH
Confidence 47999999999887653 2 5788999887664211 1111221 12334578999999999
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 226 ~~l~ 229 (250)
T PRK12939 226 LFLL 229 (250)
T ss_pred HHHh
Confidence 8875
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.2e-10 Score=99.60 Aligned_cols=167 Identities=14% Similarity=0.008 Sum_probs=101.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-chh----hhhhC--CceeeccCc---c-----------ccCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHD----ELINM--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-~~~----~l~~~--~i~~~~~d~---~-----------~~~~ 142 (272)
++++|||+ |+||+++++.|.++ |++|++++|... ... .+... .+..+..|. + ....
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAA--GFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 57999996 99999999999999 999999998643 211 11111 233444442 1 1247
Q ss_pred CCEEEEecCCCCCC-----C-----hHHHH-------HHH----H---HHhcC-----CCeEEEEecceeecCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSL-----D-----YPGDV-------RLA----A---LSWNG-----EGSFLFTSSSAIYDCSDNGACD 193 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~-----~-----~~~~~-------~~l----~---~~~~g-----vkr~V~~SS~~vYg~~~~~~~~ 193 (272)
+|+|||+++..... + +.+.+ ..+ . ....+ ++++|++||...+....
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----- 155 (256)
T PRK12745 81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP----- 155 (256)
T ss_pred CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC-----
Confidence 89999999853210 0 11100 011 1 11111 56899999977543211
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH----HHHHcCcccCCCCcccccccH
Q 024143 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV----YWLQKGTVDSRPDHILNLIHY 260 (272)
Q Consensus 194 E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~----~~l~~g~~~~~~~~~~~~I~v 260 (272)
+. +.|+.+|...|.+++.+ + ++++||+.++++...... ..+.++. .....+.+.
T Consensus 156 ------~~--~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 222 (256)
T PRK12745 156 ------NR--GEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGL-----VPMPRWGEP 222 (256)
T ss_pred ------CC--cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcC-----CCcCCCcCH
Confidence 12 57899999998876653 3 688999999987532211 1111111 112347789
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+++++..++
T Consensus 223 ~d~a~~i~~l~ 233 (256)
T PRK12745 223 EDVARAVAALA 233 (256)
T ss_pred HHHHHHHHHHh
Confidence 99999887654
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.5e-10 Score=100.50 Aligned_cols=170 Identities=8% Similarity=-0.012 Sum_probs=104.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCCEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPYV 146 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D~V 146 (272)
|+|+|||+ |+||.++++.|.++ |++|++++|++++.+.+.. ..+..+.+|. + ...++|+|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57999996 99999999999999 9999999998776655432 1344444443 1 12479999
Q ss_pred EEecCCCCC----CC-----hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 147 IFCAPPSRS----LD-----YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 147 i~~a~~~~~----~~-----~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
||+++.... .+ +.+. ++.++ ....+.+++|++||...+.. ..+. +
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~--~ 145 (248)
T PRK10538 79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP-----------YAGG--N 145 (248)
T ss_pred EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC-----------CCCC--c
Confidence 999985321 11 1111 11111 12356789999999764311 1122 5
Q ss_pred hHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCc-ccCCCCcccccccHHHHHHHHHHHh
Q 024143 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGT-VDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~-~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.|+.+|...|.+.+.. + ..+++||.+.|+..... .+.... ..........++..+|+|++++..+
T Consensus 146 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~ 220 (248)
T PRK10538 146 VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV--RFKGDDGKAEKTYQNTVALTPEDVSEAVWWVA 220 (248)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchh--hccCcHHHHHhhccccCCCCHHHHHHHHHHHh
Confidence 8999999988876653 2 57899999986542210 010000 0000001123578999999987654
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.28 E-value=3e-10 Score=97.73 Aligned_cols=167 Identities=12% Similarity=0.056 Sum_probs=103.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhCCceeeccCc---c-------ccCCCCEEEEecC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLKWT---E-------ATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-------~~~~~D~Vi~~a~ 151 (272)
.++++|||+ |+||+++++.|+++ |+ +|++++|++++... ....+..+..|. + ....+|+|||+++
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~--G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 82 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLAR--GAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG 82 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 368999996 99999999999999 99 99999998766543 112344444442 1 2336899999998
Q ss_pred C-CCCC---C-----hHHHHH-------HHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHH
Q 024143 152 P-SRSL---D-----YPGDVR-------LAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (272)
Q Consensus 152 ~-~~~~---~-----~~~~~~-------~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~s 209 (272)
. .... + +.+.+. .+. ....+.+++|++||...|... .+. +.|+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-----------~~~--~~y~~s 149 (238)
T PRK08264 83 IFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF-----------PNL--GTYSAS 149 (238)
T ss_pred cCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC-----------CCc--hHhHHH
Confidence 7 2211 0 111111 111 113457889999997765421 112 689999
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCceecCCCc--------H--HHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 210 LLKAEKVILEF-------G--GCVLRLAGLYKADRG--------A--HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlRp~~iyG~~~~--------~--~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
|...|.+.+.+ + ++++||+.+.++... + ....+... .. .....++.+|+++.+..+
T Consensus 150 K~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~~~~~~a~~~~~~--~~---~~~~~i~~~~~~~~~~~~ 224 (238)
T PRK08264 150 KAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDAPKASPADVARQILDA--LE---AGDEEVLPDEMARQVKAA 224 (238)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCcCCCCHHHHHHHHHHH--Hh---CCCCeEeccHHHHHHHHH
Confidence 99998776543 3 688999998765311 0 00001100 01 113467778888888776
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 225 ~ 225 (238)
T PRK08264 225 L 225 (238)
T ss_pred h
Confidence 5
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.9e-10 Score=98.07 Aligned_cols=166 Identities=13% Similarity=0.033 Sum_probs=104.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh------CCceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~------~~i~~~~~d~---~-----------~~~ 141 (272)
.|++++|+|+ |.||+.++++|+++ |++|++++|++++...+.. ..+..+.+|. + ...
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKA--GWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3578999996 99999999999999 9999999998765543321 1344444443 1 124
Q ss_pred CCCEEEEecCCCCCC-----C---hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSL-----D---YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~-----~---~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.+|+|||+++..... + +.+. ++.++ +...+.+++|++||...|+.. .+
T Consensus 83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~ 151 (241)
T PRK07454 83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF-----------PQ 151 (241)
T ss_pred CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC-----------CC
Confidence 689999999853211 0 1100 11111 123446799999998876432 11
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
. ..|+.+|...+.+.+.. + ++++||+.+-.+.... ..... .......+..+|+|++++.++
T Consensus 152 ~--~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~-------~~~~~-~~~~~~~~~~~~va~~~~~l~ 221 (241)
T PRK07454 152 W--GAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT-------ETVQA-DFDRSAMLSPEQVAQTILHLA 221 (241)
T ss_pred c--cHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc-------ccccc-ccccccCCCHHHHHHHHHHHH
Confidence 2 57999999988776542 3 7889999986553210 00000 001123578999999988765
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.9e-11 Score=103.59 Aligned_cols=169 Identities=11% Similarity=-0.034 Sum_probs=102.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhC--CceeeccCc---c-----------ccCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~--~i~~~~~d~---~-----------~~~~~ 143 (272)
++|+|||+ |.||++++++|.++ |++|++++|+.++.+.+ ... .+..+.+|. + ...++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE--GWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47999996 99999999999999 99999999987654432 111 233333442 1 12479
Q ss_pred CEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
|+|||+++...... +.+.+ +.++ +...+.+++|++||...+... ..
T Consensus 79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~-- 145 (270)
T PRK05650 79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG-----------PA-- 145 (270)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC-----------CC--
Confidence 99999998643211 11110 1111 123467899999998654321 11
Q ss_pred CChHHHHHHHHHHHHH----Hc---C--eeEEeeCceecCCCcHHH---HHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 203 RSPRTDVLLKAEKVIL----EF---G--GCVLRLAGLYKADRGAHV---YWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~----~~---~--~~IlRp~~iyG~~~~~~~---~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
.+.|+.+|...+.+.+ ++ + +++++|+.+..+...... .... ... .......+++++|+|+.++.+
T Consensus 146 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~vA~~i~~~ 222 (270)
T PRK05650 146 MSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMK--AQV-GKLLEKSPITAADIADYIYQQ 222 (270)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHH--HHH-HHHhhcCCCCHHHHHHHHHHH
Confidence 2579999988665443 32 2 788999999766422110 0000 000 000112358899999999887
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 223 l 223 (270)
T PRK05650 223 V 223 (270)
T ss_pred H
Confidence 5
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.3e-10 Score=100.92 Aligned_cols=184 Identities=17% Similarity=0.119 Sum_probs=122.3
Q ss_pred CCeEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCCcch--h--hhhhC------CceeeccCc-c------c--cCCC
Q 024143 84 ENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHH--D--ELINM------GITPSLKWT-E------A--TQKF 143 (272)
Q Consensus 84 ~~~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~--~--~l~~~------~i~~~~~d~-~------~--~~~~ 143 (272)
+++.|||| +|+-|++|++.|+++ |++|.++.|..... . .|... .+....+|. + . .-.+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLek--GY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P 79 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEK--GYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQP 79 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhc--CcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCc
Confidence 56789999 599999999999999 99999999863221 1 11111 133344553 1 2 2378
Q ss_pred CEEEEecCCCCCCC------h---HHH--HHHHHH--Hhc-C-CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHH
Q 024143 144 PYVIFCAPPSRSLD------Y---PGD--VRLAAL--SWN-G-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (272)
Q Consensus 144 D~Vi~~a~~~~~~~------~---~~~--~~~l~~--~~~-g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (272)
|-|+|+|+.+.... + ..+ ..+++. ... + ..||.+.||+..||.....|.+|.+|+.|. +||+.
T Consensus 80 dEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPr--SPYAv 157 (345)
T COG1089 80 DEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPR--SPYAV 157 (345)
T ss_pred hhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCC--CHHHH
Confidence 99999999765321 1 111 122221 122 2 469999999999998777899999999998 99999
Q ss_pred HHHHHHHHHHHcC---eeEEeeCcee---cCCCcH-H--------HHHHHcCcc----cCCCCcccccccHHHHHHHHHH
Q 024143 209 VLLKAEKVILEFG---GCVLRLAGLY---KADRGA-H--------VYWLQKGTV----DSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 209 sk~~aE~~l~~~~---~~IlRp~~iy---G~~~~~-~--------~~~l~~g~~----~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
+|+-+--+..++. .....-|.+| +|.++. | ..++..|.. .++-+..+||=|..|-++++.+
T Consensus 158 AKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwl 237 (345)
T COG1089 158 AKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWL 237 (345)
T ss_pred HHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHH
Confidence 9987765554432 2222233334 444331 1 123555542 4777899999999999999887
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
.+
T Consensus 238 mL 239 (345)
T COG1089 238 ML 239 (345)
T ss_pred HH
Confidence 65
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.1e-10 Score=97.80 Aligned_cols=164 Identities=14% Similarity=0.030 Sum_probs=103.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhC--CceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~--~i~~~~~d~---~-----------~~~~ 142 (272)
.++++|||+ |.||++++++|+++ |++|++++|++.+.+.+ ... .+..+..|. + .+.+
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKE--GVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 368999996 99999999999999 99999999986554332 211 233344442 1 1247
Q ss_pred CCEEEEecCCCCCCC--------hHHHHH-------HHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDVR-------LAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~~-------~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|+|||+++...... +.+.+. .+. ....+.+++|++||...+... .+.
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~ 153 (239)
T PRK07666 85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA-----------AVT 153 (239)
T ss_pred ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC-----------CCC
Confidence 999999998643211 111110 111 123457899999997654321 112
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..|+.+|...+.+++.+ + ++++||+.+..+..... .+.. .. ...++..+|+|++++.++
T Consensus 154 --~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~--~~~~----~~---~~~~~~~~~~a~~~~~~l 221 (239)
T PRK07666 154 --SAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL--GLTD----GN---PDKVMQPEDLAEFIVAQL 221 (239)
T ss_pred --cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc--cccc----cC---CCCCCCHHHHHHHHHHHH
Confidence 56889998877766432 3 78899999987642211 0111 11 124678899999998765
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.9e-10 Score=98.07 Aligned_cols=167 Identities=11% Similarity=0.009 Sum_probs=101.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC----cchhhh----hhC--CceeeccCc---c----c------
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA----DHHDEL----INM--GITPSLKWT---E----A------ 139 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~----~~~~~l----~~~--~i~~~~~d~---~----~------ 139 (272)
.++++|||+ |+||+++++.|.++ |++|+++.|.. +....+ ... .+..+.+|. + .
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAAD--GADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 478999996 99999999999999 99999977642 222211 111 233444442 1 1
Q ss_pred -cCCCCEEEEecCCCCCCC--------hHHH-------HHHHH---H----HhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 140 -TQKFPYVIFCAPPSRSLD--------YPGD-------VRLAA---L----SWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 140 -~~~~D~Vi~~a~~~~~~~--------~~~~-------~~~l~---~----~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
..++|+|||+++...... +.+. ...++ . ...+.+++|++||...+...
T Consensus 84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 154 (249)
T PRK12827 84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN--------- 154 (249)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC---------
Confidence 246899999998644211 1111 11111 1 13456899999998765321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH--HHHHHcCcccCCCCcccccccHHHHHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH--VYWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~--~~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
.+. ..|+.+|...|.+++.+ + ++++||+.++++..... ..++.+..+ ...+.+.+|+++
T Consensus 155 --~~~--~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~------~~~~~~~~~va~ 224 (249)
T PRK12827 155 --RGQ--VNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVP------VQRLGEPDEVAA 224 (249)
T ss_pred --CCC--chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCC------CcCCcCHHHHHH
Confidence 112 57999999888776543 3 78999999998754321 112222111 112457899998
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++..+
T Consensus 225 ~~~~l~ 230 (249)
T PRK12827 225 LVAFLV 230 (249)
T ss_pred HHHHHc
Confidence 877654
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.25 E-value=2e-10 Score=99.37 Aligned_cols=173 Identities=12% Similarity=0.004 Sum_probs=103.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc--hhhhhhC--CceeeccCc---c-----------ccCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINM--GITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~--~~~l~~~--~i~~~~~d~---~-----------~~~~~ 143 (272)
..++++|||+ |.||++++++|.++ |++|++++|++.. .+.+... .+..+..|. + ...++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEA--GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999997 99999999999999 9999999986521 1222222 233444442 1 12469
Q ss_pred CEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
|+|||+++...... +.+.+ +.++ ....+ .+++|++||...|.... ..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~~ 150 (248)
T TIGR01832 82 DILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI-----------RV 150 (248)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC-----------CC
Confidence 99999998643211 11111 1111 11233 56999999988765321 11
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH-HHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV-YWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~-~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..|+.+|...+.+.+.+ + ..+++||.+..+...... .......... ......++..+|+|++++..+
T Consensus 151 --~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~ 227 (248)
T TIGR01832 151 --PSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILE-RIPAGRWGTPDDIGGPAVFLA 227 (248)
T ss_pred --chhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHh-cCCCCCCcCHHHHHHHHHHHc
Confidence 46899999988877654 2 678999999866421100 0000000000 011235788999999987654
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.5e-10 Score=99.59 Aligned_cols=162 Identities=12% Similarity=-0.075 Sum_probs=101.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-C-CceeeccCc---c-----------ccCCCCEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-GITPSLKWT---E-----------ATQKFPYV 146 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~-~i~~~~~d~---~-----------~~~~~D~V 146 (272)
.++++|||+ |.||++++++|.++ |++|++.+|++++...+.. . .+..+..|. + ...++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAAL--GARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999997 99999999999999 9999999998776554322 1 244444442 1 13578999
Q ss_pred EEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCh
Q 024143 147 IFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (272)
Q Consensus 147 i~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~ 205 (272)
||+++...... +.+.+ +.++ ....+.+++|++||...+... .. ...
T Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~--~~~ 149 (273)
T PRK07825 83 VNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV-----------PG--MAT 149 (273)
T ss_pred EECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC-----------CC--Ccc
Confidence 99998643211 11111 1111 124567899999997654321 11 257
Q ss_pred HHHHHHHHHHHHHH-------cC--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 206 RTDVLLKAEKVILE-------FG--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 206 y~~sk~~aE~~l~~-------~~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+.+|...+.+.+. .+ +++++|+.+-.+-. .+.. +.....++..+|+|+.++.++
T Consensus 150 Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~--------~~~~---~~~~~~~~~~~~va~~~~~~l 213 (273)
T PRK07825 150 YCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELI--------AGTG---GAKGFKNVEPEDVAAAIVGTV 213 (273)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhh--------cccc---cccCCCCCCHHHHHHHHHHHH
Confidence 88999876654332 24 78899998743311 1110 111234688899998887765
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.9e-10 Score=101.05 Aligned_cols=134 Identities=14% Similarity=0.098 Sum_probs=90.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------ccCCCCEEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVIF 148 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~~~~D~Vi~ 148 (272)
+++|+|||+ |+||++++++|.++ |++|++++|++++.... .+++.+.+|. + ....+|+|||
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARA--GYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 357999997 99999999999999 99999999986654332 2445554442 1 1346899999
Q ss_pred ecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 149 CAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 149 ~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
+++...... +.+.+ +.++ +...+.+++|++||...+... |. ...|+
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~-~~~Y~ 146 (270)
T PRK06179 80 NAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA------------PY-MALYA 146 (270)
T ss_pred CCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC------------CC-ccHHH
Confidence 998643211 11111 1111 134568899999997654321 11 25799
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 208 ~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
.+|...|.+.+.. + ++++||+.+.++.
T Consensus 147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~ 182 (270)
T PRK06179 147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNF 182 (270)
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccc
Confidence 9999998776543 3 7899999988763
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2e-10 Score=103.52 Aligned_cols=148 Identities=12% Similarity=0.055 Sum_probs=92.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--CCceeeccCc---c-----------ccCCCCE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--~~i~~~~~d~---~-----------~~~~~D~ 145 (272)
..++|+|||+ |+||++++++|.++ |++|+++.|++++...+.. ..+..+..|. + ...++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~--G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQA--GAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence 4478999997 99999999999999 9999999998766543321 1244444443 1 1247899
Q ss_pred EEEecCCCCC------CChHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCC-CCCCCCCCCCCCCCCh
Q 024143 146 VIFCAPPSRS------LDYPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDN-GACDEDSPVVPIGRSP 205 (272)
Q Consensus 146 Vi~~a~~~~~------~~~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~-~~~~E~~p~~p~~~~~ 205 (272)
|||+|+.... +++... ++.++ ....+..++|++||...+..... ...++..+..+. ..
T Consensus 103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~--~~ 180 (315)
T PRK06196 103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKW--LA 180 (315)
T ss_pred EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChH--HH
Confidence 9999985321 111111 11111 12344579999999754321100 000111122222 57
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 206 y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
|+.+|...|.+.+.+ + ++++|||.++++.
T Consensus 181 Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~ 218 (315)
T PRK06196 181 YGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPL 218 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCc
Confidence 999999988776543 3 6889999998874
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.8e-10 Score=97.18 Aligned_cols=171 Identities=9% Similarity=0.005 Sum_probs=103.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------ccCCCCEEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVI 147 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~~~~D~Vi 147 (272)
..+++||||+ |+||+.++++|.++ |++|++++|+. ... ....+..+..|. + ....+|+||
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~--G~~v~~~~~~~--~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEA--GAKVIGFDQAF--LTQ-EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLV 81 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecch--hhh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3468999997 99999999999999 99999999976 111 112233444442 1 124589999
Q ss_pred EecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 148 FCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 148 ~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
|+++...... +.+.+ +.+. ....+.+++|++||...... ..+. +.|
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~-----------~~~~--~~Y 148 (252)
T PRK08220 82 NAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP-----------RIGM--AAY 148 (252)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC-----------CCCC--chh
Confidence 9998643211 11111 1111 12235578999999754321 1122 679
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH------HHHHcCc--ccCCCCcccccccHHHHHHHHHH
Q 024143 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV------YWLQKGT--VDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 207 ~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~------~~l~~g~--~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
+.+|...|.+++.+ + ..+++|+.++++....+. .....+. ..........+++++|+|++++.
T Consensus 149 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 228 (252)
T PRK08220 149 GASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLF 228 (252)
T ss_pred HHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHH
Confidence 99999998877543 2 688999999987532110 0000000 00111233458999999999876
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
.+
T Consensus 229 l~ 230 (252)
T PRK08220 229 LA 230 (252)
T ss_pred Hh
Confidence 54
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.7e-10 Score=96.66 Aligned_cols=173 Identities=13% Similarity=0.009 Sum_probs=102.6
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE-ecCCcchhhhhh----C--CceeeccCc---c----c-------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELIN----M--GITPSLKWT---E----A------- 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~-~R~~~~~~~l~~----~--~i~~~~~d~---~----~------- 139 (272)
+++++++|+|+ |+||.++++.|.++ |++|+.+ +|++++...+.. . .+..+..|. + .
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~--g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKE--GAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK 80 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45678999996 99999999999999 9999998 887665433221 1 233444442 1 1
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
..++|+|||+++...... +.+. ++.+. ....+.+++|++||...+....
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~---------- 150 (247)
T PRK05565 81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS---------- 150 (247)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC----------
Confidence 237999999998653211 1111 11111 1234567899999976543210
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
.. ..|+.+|...+.+++.. + ++++||+.+..+........... .. ........+...+|++++++.
T Consensus 151 -~~--~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~va~~~~~ 225 (247)
T PRK05565 151 -CE--VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKE-GL-AEEIPLGRLGKPEEIAKVVLF 225 (247)
T ss_pred -Cc--cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHH-HH-HhcCCCCCCCCHHHHHHHHHH
Confidence 11 47888988777665543 3 68899999865432211100000 00 000112335688999998877
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
.+
T Consensus 226 l~ 227 (247)
T PRK05565 226 LA 227 (247)
T ss_pred Hc
Confidence 65
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.2e-10 Score=111.76 Aligned_cols=174 Identities=12% Similarity=0.045 Sum_probs=110.0
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-----CceeeccCc---c----c-------cCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----GITPSLKWT---E----A-------TQK 142 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-----~i~~~~~d~---~----~-------~~~ 142 (272)
..+++||||+ |+||+++++.|.++ |++|++++|++++...+... .+..+..|. + + ..+
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~--Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~ 498 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAE--GACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG 498 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4478999996 99999999999999 99999999987665443221 333444442 1 1 237
Q ss_pred CCEEEEecCCCCCCC--------hHHH-------HHHH----H--HHhcCC-CeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGD-------VRLA----A--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~-------~~~l----~--~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
+|+|||+++...... +... ...+ . ....+. .+||++||...+... +
T Consensus 499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~------------~ 566 (681)
T PRK08324 499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG------------P 566 (681)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC------------C
Confidence 999999998543211 1110 1111 1 123343 799999997654321 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCcee-cCCCc--HH-HHHH-HcCc-------ccCCCCccccccc
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY-KADRG--AH-VYWL-QKGT-------VDSRPDHILNLIH 259 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iy-G~~~~--~~-~~~l-~~g~-------~~~~~~~~~~~I~ 259 (272)
....|+.+|...|.+++.+ + +.+++|+.+| +.+.. .. ..+. ..+. ....+.....+++
T Consensus 567 -~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~ 645 (681)
T PRK08324 567 -NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVT 645 (681)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccC
Confidence 1258999999999888764 2 5789999998 54321 11 0011 1111 1123445667999
Q ss_pred HHHHHHHHHHHh
Q 024143 260 YEVNTLVLFIAS 271 (272)
Q Consensus 260 v~Dva~ai~~a~ 271 (272)
.+|+|++++.++
T Consensus 646 ~~DvA~a~~~l~ 657 (681)
T PRK08324 646 PEDVAEAVVFLA 657 (681)
T ss_pred HHHHHHHHHHHh
Confidence 999999998765
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.4e-10 Score=96.70 Aligned_cols=136 Identities=14% Similarity=0.066 Sum_probs=89.0
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-----CceeeccCc---c-----------ccCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----GITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-----~i~~~~~d~---~-----------~~~~~ 143 (272)
+++++|||+ |.||+++++.|.++ |++|++++|++++...+... .+..+..|. + ....+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ--GATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 478999996 99999999999999 99999999987665443221 233444442 1 12358
Q ss_pred CEEEEecCCCCC------CC---hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRS------LD---YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 144 D~Vi~~a~~~~~------~~---~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
|++||+++.... .+ +...+ +.++ +...+.+++|++||...+... | .
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~---------~--~- 147 (257)
T PRK07024 80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL---------P--G- 147 (257)
T ss_pred CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC---------C--C-
Confidence 999999985321 11 11111 1111 123456899999987643211 0 1
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
...|+.+|+..|.+.+.. + ++++||+.+.++.
T Consensus 148 -~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 188 (257)
T PRK07024 148 -AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPM 188 (257)
T ss_pred -CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCch
Confidence 157999999999877543 3 7889999998763
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=9.4e-10 Score=95.23 Aligned_cols=161 Identities=14% Similarity=0.092 Sum_probs=99.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--------CCceeeccCc---c-----------cc
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWT---E-----------AT 140 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--------~~i~~~~~d~---~-----------~~ 140 (272)
+++++|||+ |.||++++++|.++ |++|++++|++++.+.+.. ..+..+.+|. + ..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK--GRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 368999996 99999999999999 9999999998766544321 1233344442 1 23
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|+|||+++...... +.+.+ +.+. ....+.+++|++||...+... | .
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~-~ 149 (248)
T PRK08251 80 GGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL---------P-G 149 (248)
T ss_pred CCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC---------C-C
Confidence 47999999998533211 11111 1111 123467899999997543211 0 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
+. +.|+.+|...|.+.+.+ + +++++|+++..+.... .. . ....+..+|+|+.++.+
T Consensus 150 ~~--~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~----~~--~-------~~~~~~~~~~a~~i~~~ 214 (248)
T PRK08251 150 VK--AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK----AK--S-------TPFMVDTETGVKALVKA 214 (248)
T ss_pred Cc--ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc----cc--c-------CCccCCHHHHHHHHHHH
Confidence 12 57999999888766542 2 5788999987543110 00 0 11246677777777665
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 215 ~ 215 (248)
T PRK08251 215 I 215 (248)
T ss_pred H
Confidence 4
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1e-09 Score=94.65 Aligned_cols=168 Identities=13% Similarity=-0.015 Sum_probs=97.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE-ecCCcchhhh----hhC--CceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~-~R~~~~~~~l----~~~--~i~~~~~d~---~-----------~~~ 141 (272)
|++++|||+ |+||++++++|.++ |++|+++ .|++++..+. ... .+..+.+|. + ...
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQE--GYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE 78 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 568999997 99999999999999 9999874 5655443322 111 233334442 1 134
Q ss_pred CCCEEEEecCCCCCC----C-----hHHHH-----------HHHHH--Hh---cCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSL----D-----YPGDV-----------RLAAL--SW---NGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~----~-----~~~~~-----------~~l~~--~~---~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
.+|+|||+++..... + +...+ +.++. .. ...++||++||...+....
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~-------- 150 (247)
T PRK09730 79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAP-------- 150 (247)
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCC--------
Confidence 689999999853211 0 10100 01110 11 1246799999975432210
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----H-HHHHHHcCcccCCCCcccccccHHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----A-HVYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~-~~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
... ..|+.+|...|.+++.. + .+++||+.+|++... + ....+....+.. -....+|
T Consensus 151 --~~~--~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~d 220 (247)
T PRK09730 151 --GEY--VDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ------RGGQPEE 220 (247)
T ss_pred --Ccc--cchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC------CCcCHHH
Confidence 011 35889999888776542 3 688999999998532 1 111122222211 1236899
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
++++++.++
T Consensus 221 va~~~~~~~ 229 (247)
T PRK09730 221 VAQAIVWLL 229 (247)
T ss_pred HHHHHHhhc
Confidence 999987654
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.3e-09 Score=95.08 Aligned_cols=171 Identities=12% Similarity=0.121 Sum_probs=103.7
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--------CCceeeccCc---c-----------ccC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--------~~i~~~~~d~---~-----------~~~ 141 (272)
++|||||+ |+||++++++|.++ |++|+.++|+..+...+.. ..+..+..|. + ...
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEE--GYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 57999996 99999999999999 9999999998655433221 1233444442 1 124
Q ss_pred CCCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcC-CCeEEEEecce-eecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNG-EGSFLFTSSSA-IYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~-vYg~~~~~~~~E~~p~ 198 (272)
.+|+|||+++..... + +.+.+ +.+. +...+ ..++|++||.. .|+..
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~----------- 149 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK----------- 149 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC-----------
Confidence 789999999853321 1 11111 1111 11234 46999999864 23211
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc-HHHHHH--HcC----cc---cCCCCccccccc
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-AHVYWL--QKG----TV---DSRPDHILNLIH 259 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~-~~~~~l--~~g----~~---~~~~~~~~~~I~ 259 (272)
. .+.|+.+|++.+.+++.+ + +.++||+.++++... ...... ..+ +. ..++.....+++
T Consensus 150 -~--~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (259)
T PRK12384 150 -H--NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCD 226 (259)
T ss_pred -C--CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCC
Confidence 1 157999999887766543 3 688999998876422 111100 111 00 122334566899
Q ss_pred HHHHHHHHHHHh
Q 024143 260 YEVNTLVLFIAS 271 (272)
Q Consensus 260 v~Dva~ai~~a~ 271 (272)
.+|++++++..+
T Consensus 227 ~~dv~~~~~~l~ 238 (259)
T PRK12384 227 YQDVLNMLLFYA 238 (259)
T ss_pred HHHHHHHHHHHc
Confidence 999999987553
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.9e-10 Score=95.98 Aligned_cols=171 Identities=9% Similarity=-0.048 Sum_probs=101.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec-CCcchhhh----hhCC--ceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDEL----INMG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~~~l----~~~~--i~~~~~d~---~-----------~~~ 141 (272)
.++++|||+ |+||++++++|.++ |++|+++.+ .++..+.+ ...+ +..+..|. + ...
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQE--GAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 468999996 99999999999999 999987654 33333222 2222 33344442 1 124
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-------HHHH---H---HhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~---~---~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.+|+|||+++...... +.+.+ ..++ . ...+.+++|++||...+... .+
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~ 152 (247)
T PRK12935 84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG-----------FG 152 (247)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-----------CC
Confidence 5899999998643211 11110 0111 0 12345799999996543211 12
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
. +.|+.+|...|.+.+.. + .++++|+.+..+........... . .........+++++|++++++.++
T Consensus 153 ~--~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~-~-~~~~~~~~~~~~~edva~~~~~~~ 228 (247)
T PRK12935 153 Q--TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQ-K-IVAKIPKKRFGQADEIAKGVVYLC 228 (247)
T ss_pred C--cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHH-H-HHHhCCCCCCcCHHHHHHHHHHHc
Confidence 2 57999999877765442 3 68899999976532111000000 0 011223456899999999998765
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.7e-10 Score=98.86 Aligned_cols=135 Identities=13% Similarity=0.082 Sum_probs=89.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------ccCCCCEEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVIF 148 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~~~~D~Vi~ 148 (272)
|++++|||+ |+||+++++.|.++ |++|++++|++++...+...++..+..|. + ...++|+|||
T Consensus 1 mk~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAA--GYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 578999997 99999999999999 99999999987766655555555544442 1 1247899999
Q ss_pred ecCCCCCCC--------hHHHH-----------HHHHH-HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHH
Q 024143 149 CAPPSRSLD--------YPGDV-----------RLAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (272)
Q Consensus 149 ~a~~~~~~~--------~~~~~-----------~~l~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (272)
+++...... +.+.+ +.++. ...+..++|++||...+... + . ...|+.
T Consensus 79 ~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~--~~~Y~~ 145 (274)
T PRK05693 79 NAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT---------P--F--AGAYCA 145 (274)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC---------C--C--ccHHHH
Confidence 998643211 11111 11110 11245789999986543211 0 1 157999
Q ss_pred HHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 209 VLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 209 sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
+|...|.+.+.+ + +++++|+.+..+
T Consensus 146 sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 146 SKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence 999888765432 3 688999998754
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.5e-09 Score=93.80 Aligned_cols=166 Identities=11% Similarity=-0.002 Sum_probs=100.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-C--CceeeccCc---c-----------ccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M--GITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~--~i~~~~~d~---~-----------~~~~~D~ 145 (272)
.++++|||+ |+||++++++|.++ |++|++++|++++...+.. . .+..+..|. + ...++|+
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAE--GARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999997 99999999999999 9999999998655443322 1 233333332 1 1347899
Q ss_pred EEEecCCCCCCC--------hHHHH-------HHHHH---H-hcCCCeEEEEecc-eeecCCCCCCCCCCCCCCCCCCCh
Q 024143 146 VIFCAPPSRSLD--------YPGDV-------RLAAL---S-WNGEGSFLFTSSS-AIYDCSDNGACDEDSPVVPIGRSP 205 (272)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~~-------~~l~~---~-~~gvkr~V~~SS~-~vYg~~~~~~~~E~~p~~p~~~~~ 205 (272)
|||+++...... +.+.+ ..+.. . .....++|++||. +.|+.. .. +.
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~------------~~--~~ 149 (249)
T PRK06500 84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP------------NS--SV 149 (249)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC------------Cc--cH
Confidence 999998643211 11111 11111 1 1223577777774 444421 12 58
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-------H---HHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-------H---VYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 206 y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-------~---~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
|+.+|...|.+++.+ + ..++||+.++++.... . ...+.++.+ ..-+...+|++++
T Consensus 150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~ 223 (249)
T PRK06500 150 YAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVP------LGRFGTPEEIAKA 223 (249)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCC------CCCCcCHHHHHHH
Confidence 999999999888532 3 6889999999873110 0 011111111 1124578999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 224 ~~~l~ 228 (249)
T PRK06500 224 VLYLA 228 (249)
T ss_pred HHHHc
Confidence 87654
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.8e-10 Score=95.71 Aligned_cols=171 Identities=13% Similarity=0.092 Sum_probs=101.7
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC-Ccchhhhhh----C-C---ceeeccC---cc-----------ccC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELIN----M-G---ITPSLKW---TE-----------ATQ 141 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~-~~~~~~l~~----~-~---i~~~~~d---~~-----------~~~ 141 (272)
+++|||+ |+||+++++.|.++ |++|++++|+ +++.+.+.. . + +..+..| .+ ...
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ--GAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG 78 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 4899996 99999999999999 9999999997 544433221 1 1 1112223 21 134
Q ss_pred CCCEEEEecCCCCCCC--------hHH-----------HHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPG-----------DVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-----------~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
++|+|||+++...... +.+ .++.++ +...+.+++|++||...|.... .
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~-----------~ 147 (251)
T PRK07069 79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP-----------D 147 (251)
T ss_pred CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC-----------C
Confidence 7899999998643211 111 111121 1234578999999987664321 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C----eeEEeeCceecCCCcHHHHHHHcCcc---cCCCCcccccccHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G----GCVLRLAGLYKADRGAHVYWLQKGTV---DSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~----~~IlRp~~iyG~~~~~~~~~l~~g~~---~~~~~~~~~~I~v~Dva~a 266 (272)
...|+.+|...+.+.+.+ + +..++|+.+.++........+..... .........+.+.+|++++
T Consensus 148 --~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 225 (251)
T PRK07069 148 --YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHA 225 (251)
T ss_pred --CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHH
Confidence 147999999888776642 1 57789999887753322111110000 0111122235678999998
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++.++
T Consensus 226 ~~~l~ 230 (251)
T PRK07069 226 VLYLA 230 (251)
T ss_pred HHHHc
Confidence 87654
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.3e-09 Score=93.43 Aligned_cols=138 Identities=11% Similarity=0.024 Sum_probs=88.5
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~ 143 (272)
+..++++|||+ |+||++++++|.++ |++|+.++|++.+...+.. ..+..+..|. + ....+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAE--GWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 44578999996 99999999999999 9999999887655443321 1233444442 1 12358
Q ss_pred CEEEEecCCCCCC-------C---hHHHH-------HHHHH-H----hcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSL-------D---YPGDV-------RLAAL-S----WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 144 D~Vi~~a~~~~~~-------~---~~~~~-------~~l~~-~----~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
|+|||+|+..... + +.+.+ ..+.. . ....+++|++||...+... |
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~------------~- 152 (255)
T PRK05717 86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE------------P- 152 (255)
T ss_pred CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC------------C-
Confidence 9999999864211 0 11111 11110 0 1224689999987654221 0
Q ss_pred CCChHHHHHHHHHHHHHHc----C----eeEEeeCceecCC
Q 024143 202 GRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYKAD 234 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~----~----~~IlRp~~iyG~~ 234 (272)
..+.|+.+|...|.+.+.+ + +.+++|+.+.++.
T Consensus 153 ~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~ 193 (255)
T PRK05717 153 DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARD 193 (255)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCc
Confidence 1157999999999877654 2 5788999998864
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.3e-09 Score=93.74 Aligned_cols=166 Identities=11% Similarity=-0.013 Sum_probs=99.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhh----hhhC--CceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~----l~~~--~i~~~~~d~---~-----------~~~ 141 (272)
.++++|||+ |+||+++++.|+++ |++|+.+.|+..+ ... +... .+..+..|. + ...
T Consensus 5 ~~~vlItG~sg~iG~~l~~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK05557 5 GKVALVTGASRGIGRAIAERLAAQ--GANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG 82 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999996 99999999999999 9999888886543 111 2111 233333342 1 124
Q ss_pred CCCEEEEecCCCCCCC--------hHHH-------HHHHH------HHhcCCCeEEEEecce-eecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGD-------VRLAA------LSWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-------~~~l~------~~~~gvkr~V~~SS~~-vYg~~~~~~~~E~~p~~ 199 (272)
++|+|||+++...... +.+. ...+. ....+.+++|++||.. +|+..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~------------ 150 (248)
T PRK05557 83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP------------ 150 (248)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC------------
Confidence 7899999998643211 1111 11111 1234567899999964 33321
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH----HHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----VYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~----~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
.. ..|+.+|...|.+++.+ + ++++||+.+..+..... ........ ....+++.+|++++
T Consensus 151 ~~--~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~va~~ 222 (248)
T PRK05557 151 GQ--ANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQI------PLGRLGQPEEIASA 222 (248)
T ss_pred CC--chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcC------CCCCCcCHHHHHHH
Confidence 11 57889999888766543 2 68899998865432211 11111111 12236789999998
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
+...+
T Consensus 223 ~~~l~ 227 (248)
T PRK05557 223 VAFLA 227 (248)
T ss_pred HHHHc
Confidence 87643
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.1e-09 Score=99.84 Aligned_cols=170 Identities=12% Similarity=0.081 Sum_probs=104.9
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC--ceeeccCc---c-----------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------AT 140 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~--i~~~~~d~---~-----------~~ 140 (272)
+.+++|+|||+ |.||++++++|.++ |++|+++.|++++.+.+. ..+ +..+..|. + .+
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~--G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARR--GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL 83 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence 34568999997 99999999999999 999999999876654332 222 33333442 1 13
Q ss_pred CCCCEEEEecCCCCCCC--------hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
..+|++||+++...... +.+. ++.++ ....+.++||++||...|....
T Consensus 84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~----------- 152 (334)
T PRK07109 84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP----------- 152 (334)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC-----------
Confidence 47899999998643211 1111 11111 1234567999999988764311
Q ss_pred CCCCChHHHHHHHHHHHHHHc---------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF---------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~---------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
. .+.|+.+|...+.+.+.. + +++++|+.+..|........+. ........++..+|+|++++
T Consensus 153 ~--~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~-----~~~~~~~~~~~pe~vA~~i~ 225 (334)
T PRK07109 153 L--QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLP-----VEPQPVPPIYQPEVVADAIL 225 (334)
T ss_pred c--chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhcc-----ccccCCCCCCCHHHHHHHHH
Confidence 1 257999998876654321 2 6889999887653211110110 01111233567899999998
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
.++
T Consensus 226 ~~~ 228 (334)
T PRK07109 226 YAA 228 (334)
T ss_pred HHH
Confidence 775
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.9e-10 Score=100.75 Aligned_cols=147 Identities=12% Similarity=0.075 Sum_probs=87.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh------CCceeeccCc---c----c-------cC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E----A-------TQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~------~~i~~~~~d~---~----~-------~~ 141 (272)
.+++++|||+ |+||.+++++|.++ |++|++++|+.++...+.. ..+..+..|. + . ..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKR--GWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 3468999996 99999999999999 9999999998765433211 1233444442 1 1 13
Q ss_pred CCCEEEEecCCCCC-----C----ChHHHH-----------HHHH--HHhcC--CCeEEEEecceeecCC-CC---CC--
Q 024143 142 KFPYVIFCAPPSRS-----L----DYPGDV-----------RLAA--LSWNG--EGSFLFTSSSAIYDCS-DN---GA-- 191 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~-----~----~~~~~~-----------~~l~--~~~~g--vkr~V~~SS~~vYg~~-~~---~~-- 191 (272)
.+|+|||+|+.... . ++...+ +.++ +...+ .+|+|++||...|... .+ .+
T Consensus 83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~ 162 (322)
T PRK07453 83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP 162 (322)
T ss_pred CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence 58999999985321 1 011110 1111 11222 3699999998765311 00 00
Q ss_pred CC------------------CCCCCCCCCCChHHHHHHHHHHHHH----Hc----C--eeEEeeCceecC
Q 024143 192 CD------------------EDSPVVPIGRSPRTDVLLKAEKVIL----EF----G--GCVLRLAGLYKA 233 (272)
Q Consensus 192 ~~------------------E~~p~~p~~~~~y~~sk~~aE~~l~----~~----~--~~IlRp~~iyG~ 233 (272)
.+ +..+..|. +.|+.+|+..+.+.+ ++ + +..+|||++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 163 ADLGDLSGFEAGFKAPISMADGKKFKPG--KAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred cchhhhhcchhcccccccccCccCCCcc--chhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 00 11223343 689999987765443 33 3 578999999863
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.3e-10 Score=96.77 Aligned_cols=168 Identities=12% Similarity=0.013 Sum_probs=101.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh------CCceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~------~~i~~~~~d~---~-----------~~~ 141 (272)
..++++|||+ |+||.++++.|+++ |++|++++|++++.+.+.. ..+..+..|. + .+.
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEA--GADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4578999996 99999999999999 9999999998765443321 1233333442 1 134
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-------HHHH-------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLAA-------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~-------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
++|+|||+|+...... +.+.+ ..+. ....+.+++|++||..-+. +..
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~ 155 (263)
T PRK07814 87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL-----------AGR 155 (263)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------CCC
Confidence 7899999998532211 11110 1111 0124567899999864211 011
Q ss_pred CCCCChHHHHHHHHHHHHHHcC--------eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~~--------~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
+. +.|+.+|...|.+++.+. +..++|+.+..+.... +...+.. . .........+|+|+
T Consensus 156 ~~--~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~va~ 227 (263)
T PRK07814 156 GF--AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEK-A-----TPLRRLGDPEDIAA 227 (263)
T ss_pred CC--chhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHh-c-----CCCCCCcCHHHHHH
Confidence 22 689999999998877642 5678888876442111 1001111 1 11122467899999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++.++
T Consensus 228 ~~~~l~ 233 (263)
T PRK07814 228 AAVYLA 233 (263)
T ss_pred HHHHHc
Confidence 887654
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.5e-09 Score=94.71 Aligned_cols=139 Identities=12% Similarity=0.015 Sum_probs=88.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~~ 142 (272)
.+++||||+ |+||+++++.|.++ |++|+.++|+.++.+.+. .. .+..+.+|. + ....
T Consensus 12 ~k~ilItGa~g~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 12 GKTALVTGGSRGLGLQIAEALGEA--GARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred CCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 478999996 99999999999999 999999999876543322 11 233344442 1 1246
Q ss_pred CCEEEEecCCCCCCC--------hHHHH-------HHHH---H----HhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDV-------RLAA---L----SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-------~~l~---~----~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
+|+|||+++...... +.+.+ ..++ . ...+.++||++||...+...... ..+
T Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-------~~~ 162 (259)
T PRK08213 90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-------VMD 162 (259)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-------ccC
Confidence 899999998532110 11111 1111 0 12356799999997665432111 012
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
. ..|+.+|+..|.+++.+ + ..+++|+.+-.+
T Consensus 163 ~--~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~ 202 (259)
T PRK08213 163 T--IAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTK 202 (259)
T ss_pred c--chHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCc
Confidence 2 58999999999887754 2 577889887654
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=9.6e-10 Score=95.99 Aligned_cols=134 Identities=14% Similarity=0.051 Sum_probs=87.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----CCceeeccCc---c--------c----cCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MGITPSLKWT---E--------A----TQKF 143 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~~i~~~~~d~---~--------~----~~~~ 143 (272)
|+++||||+ |+||+.++++|.++ |++|++++|++++.+.+.. ..+..+..|. + . ..++
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAE--GWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 678999997 99999999999999 9999999998876654432 1234444442 1 1 3467
Q ss_pred CEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEeccee-ecCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~p~~p~ 201 (272)
|+|||||+...... +...+ +.+. +...+..++|++||... |+..
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------------- 144 (260)
T PRK08267 79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP-------------- 144 (260)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC--------------
Confidence 99999998643211 11100 1111 12345679999999643 3321
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
....|+.+|...|.+.+.. + +++++|+.+-.+
T Consensus 145 ~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~ 185 (260)
T PRK08267 145 GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTA 185 (260)
T ss_pred CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCc
Confidence 1157999999888766553 2 677899988643
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.5e-10 Score=94.92 Aligned_cols=160 Identities=10% Similarity=-0.016 Sum_probs=99.6
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC---cc----cc------CCCCEEEEec
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW---TE----AT------QKFPYVIFCA 150 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d---~~----~~------~~~D~Vi~~a 150 (272)
++++|||+ |.||++++++|.++ |++|+++.|++.+.. ..+.+..| .+ .+ .++|+|||++
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANL--GHQVIGIARSAIDDF-----PGELFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCccccc-----CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 68999997 99999999999999 999999999865411 11222233 21 11 2689999999
Q ss_pred CCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHH
Q 024143 151 PPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (272)
Q Consensus 151 ~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~s 209 (272)
+...... +.+.+ +.++ ....+.+++|++||..+|+.. .. ..|+.+
T Consensus 77 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~--~~Y~~s 142 (234)
T PRK07577 77 GIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL------------DR--TSYSAA 142 (234)
T ss_pred CCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC------------Cc--hHHHHH
Confidence 8643211 11111 1111 123467899999998876531 11 579999
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCceecCCCcH-------HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 210 LLKAEKVILEF-------G--GCVLRLAGLYKADRGA-------HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|...|.+.+.+ + ++++||+.+..+.... ....+.... + .......+|+|++++..+
T Consensus 143 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~a~~~~~l~ 214 (234)
T PRK07577 143 KSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASI----P--MRRLGTPEEVAAAIAFLL 214 (234)
T ss_pred HHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcC----C--CCCCcCHHHHHHHHHHHh
Confidence 99988776542 3 6889999988654210 000111111 1 112346789999887654
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.3e-09 Score=94.92 Aligned_cols=169 Identities=12% Similarity=0.064 Sum_probs=105.4
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC--ceeeccCc---c-----------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------AT 140 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~--i~~~~~d~---~-----------~~ 140 (272)
+..++++|||+ |+||+.++++|.++ |++|+.+.|++++...+. ..+ +....+|. + ..
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGA--GAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH 86 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 34578999997 99999999999999 999999999876543322 122 34444442 1 13
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
...|+|||+++...... +.+.+ ..+. ....+.+++|++||...+...
T Consensus 87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~------------ 154 (256)
T PRK06124 87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR------------ 154 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC------------
Confidence 46799999998643211 11111 0111 123457899999997643211
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH------HHHHHcCcccCCCCcccccccHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH------VYWLQKGTVDSRPDHILNLIHYEVNT 264 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~------~~~l~~g~~~~~~~~~~~~I~v~Dva 264 (272)
| ....|+.+|...+.+.+.. + ...++|+.+..+..... ..++.... ....+++.+|++
T Consensus 155 ~-~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~a 227 (256)
T PRK06124 155 A-GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRT------PLGRWGRPEEIA 227 (256)
T ss_pred C-CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcC------CCCCCCCHHHHH
Confidence 0 1157899998888776543 2 67899999988752211 11121111 122378899999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
++++.++
T Consensus 228 ~~~~~l~ 234 (256)
T PRK06124 228 GAAVFLA 234 (256)
T ss_pred HHHHHHc
Confidence 9987764
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.1e-09 Score=92.33 Aligned_cols=161 Identities=14% Similarity=-0.024 Sum_probs=100.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc---c-----------ccCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~---~-----------~~~~~D 144 (272)
++|+|+|+ |+||++++++|+++ |++|++++|++++...+.. ..+..+.+|. + ....+|
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAE--GYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHC--CCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 68999997 99999999999999 9999999998765443321 2344444442 1 124799
Q ss_pred EEEEecCCCCCCC--------hHHHH-----------HHHHH-HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSLD--------YPGDV-----------RLAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~l~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
+|||+++...... +.+.+ +.++. ...+.+++|++||...+... .+. .
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~--~ 151 (237)
T PRK07326 85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFF-----------AGG--A 151 (237)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCC-----------CCC--c
Confidence 9999998643211 11111 11111 12345789999987644211 112 5
Q ss_pred hHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.|+.+|+..+.+.+.+ + ++++||+.+..+.... .. +......+..+|+++.++.++
T Consensus 152 ~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~--------~~---~~~~~~~~~~~d~a~~~~~~l 216 (237)
T PRK07326 152 AYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGH--------TP---SEKDAWKIQPEDIAQLVLDLL 216 (237)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccc--------cc---chhhhccCCHHHHHHHHHHHH
Confidence 7888998777665542 3 7889999987653211 00 000011367899999887765
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.2e-09 Score=95.10 Aligned_cols=173 Identities=10% Similarity=-0.011 Sum_probs=103.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhh---hhhC--CceeeccCc---c-----------ccCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE---LINM--GITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~---l~~~--~i~~~~~d~---~-----------~~~~~ 143 (272)
.+++||||+ |.||++++++|.++ |++|++++|++++... +... .+..+..|. + ....+
T Consensus 7 ~~~ilItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 7 DKVVIVTGGASGIGAAISLRLAEE--GAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHc--CCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 368999997 99999999999999 9999999998765421 1111 233444442 1 12478
Q ss_pred CEEEEecCCCCCC---C----hHHHHH-------HHH---H--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSL---D----YPGDVR-------LAA---L--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 144 D~Vi~~a~~~~~~---~----~~~~~~-------~l~---~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
|+|||+++..... + +.+.+. .+. . ...+.+++|++||...+... .+. .
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~--~ 151 (258)
T PRK08628 85 DGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ-----------GGT--S 151 (258)
T ss_pred CEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC-----------CCC--c
Confidence 9999999853211 1 111110 111 0 11234689999997654211 112 5
Q ss_pred hHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCc-----ccCCCCcccccccHHHHHHHHHHH
Q 024143 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGT-----VDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~-----~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
.|+.+|...|.+++.. + ...+||+.++++........+.... ..........++..+|+|++++.+
T Consensus 152 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 231 (258)
T PRK08628 152 GYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFL 231 (258)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHH
Confidence 8999999999887753 2 6889999999874221110000000 000000012367889999998876
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 232 ~ 232 (258)
T PRK08628 232 L 232 (258)
T ss_pred h
Confidence 5
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.5e-09 Score=94.42 Aligned_cols=165 Identities=11% Similarity=-0.029 Sum_probs=99.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------ccCCCCEEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVIF 148 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~~~~D~Vi~ 148 (272)
.++++|||+ |.||++++++|.++ |++|+.++|++++. .....+..+..|. + ....+|+|||
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~--g~~v~~~~r~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 81 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAA--GATVVVCGRRAPET--VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN 81 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCChhhh--hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478999996 99999999999999 99999999976541 1122344444442 1 1246899999
Q ss_pred ecCCCCCCC--------hHHHH-------HHHH------HHh-cCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 149 CAPPSRSLD--------YPGDV-------RLAA------LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 149 ~a~~~~~~~--------~~~~~-------~~l~------~~~-~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
+++...... +.+.+ ..+. ... .+..++|++||...+... ... +.|
T Consensus 82 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------~~~--~~Y 148 (252)
T PRK07856 82 NAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS-----------PGT--AAY 148 (252)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC-----------CCC--chh
Confidence 998532111 11111 0111 011 235789999997654211 112 579
Q ss_pred HHHHHHHHHHHHHc----C----eeEEeeCceecCCCcHH------HHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 207 TDVLLKAEKVILEF----G----GCVLRLAGLYKADRGAH------VYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 207 ~~sk~~aE~~l~~~----~----~~IlRp~~iyG~~~~~~------~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|...|.+++.. + ...++|+.+..+..... ...+.+..+ ...+...+|+|++++..+
T Consensus 149 ~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~p~~va~~~~~L~ 221 (252)
T PRK07856 149 GAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVP------LGRLATPADIAWACLFLA 221 (252)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCC------CCCCcCHHHHHHHHHHHc
Confidence 99999999887654 2 46688988875532110 001111111 122457789998876543
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.4e-09 Score=92.44 Aligned_cols=136 Identities=10% Similarity=0.066 Sum_probs=88.5
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------ccCCCCEE
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYV 146 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~~~~D~V 146 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++.... ...+..+..|. + ....+|+|
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 81 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEA--GARVVTTARSRPDDL---PEGVEFVAADLTTAEGCAAVARAVLERLGGVDIL 81 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHC--CCEEEEEeCChhhhc---CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 34478999996 99999999999999 999999999754321 12233444442 1 23478999
Q ss_pred EEecCCCCC-----C-----ChHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 147 IFCAPPSRS-----L-----DYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 147 i~~a~~~~~-----~-----~~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
||+|+.... . ++.+.+ +.++ ....+.+++|++||...+... +...
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------~~~~ 149 (260)
T PRK06523 82 VHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL------------PEST 149 (260)
T ss_pred EECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC------------CCCc
Confidence 999984210 0 111111 1111 123456789999997654311 1112
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
..|+.+|...|.+++.. + ..+++|+.+..+.
T Consensus 150 ~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~ 189 (260)
T PRK06523 150 TAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA 189 (260)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 68999999998776653 2 6789999998875
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.4e-09 Score=92.38 Aligned_cols=173 Identities=10% Similarity=-0.010 Sum_probs=104.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCe-EEEEecCCcchhh----hhhCC--ceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDE----LINMG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~-V~~~~R~~~~~~~----l~~~~--i~~~~~d~---~-----------~~~ 141 (272)
.++++|+|+ |.||+.++++|.++ |++ |++++|++++... +...+ +..+..|. + ...
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~--G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAER--GAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 468999997 99999999999999 999 9999998655432 21122 22233332 1 124
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-----------HHHHH--HhcC-CCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAAL--SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~~--~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
++|+|||+++...... +.+.+ +.++. ...+ ..++|++||...|+...
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~----------- 152 (260)
T PRK06198 84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP----------- 152 (260)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC-----------
Confidence 6899999998643211 11110 11111 1222 46899999988765321
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCc--cc---CCCCcccccccHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGT--VD---SRPDHILNLIHYEVNTL 265 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~--~~---~~~~~~~~~I~v~Dva~ 265 (272)
. .+.|+.+|...|.+.+.. + .+.++|++++++........+.... .. ........+++.+|+++
T Consensus 153 ~--~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 230 (260)
T PRK06198 153 F--LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVAR 230 (260)
T ss_pred C--cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHH
Confidence 1 157999999998877643 2 5778999998875321110110000 00 01112334688999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++.++
T Consensus 231 ~~~~l~ 236 (260)
T PRK06198 231 AVAFLL 236 (260)
T ss_pred HHHHHc
Confidence 988764
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.6e-09 Score=91.96 Aligned_cols=170 Identities=8% Similarity=-0.035 Sum_probs=99.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D~ 145 (272)
.++++|||+ |+||++++++|.++ |+.|+...|+.++.+.+.. ..+.....|. + .+.++|+
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQ--GAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999996 99999999999999 9999988888766554322 1234444442 1 1356899
Q ss_pred EEEecCCCCCC--------ChHHHH-----------HHHH--HHhcCCCeEEEEeccee-ecCCCCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRSL--------DYPGDV-----------RLAA--LSWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 146 Vi~~a~~~~~~--------~~~~~~-----------~~l~--~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~p~~p~~~ 203 (272)
|||+++..... ++.+.+ +.+. ....+.+++|++||... |+.. ..
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~-- 149 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP------------GQ-- 149 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC------------CC--
Confidence 99999864211 111111 1111 11235679999999753 3321 01
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..|+.+|...+.+.+.. + .++++|+.+..+........... .. ........+...+|++++++..+
T Consensus 150 ~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ia~~~~~l~ 224 (245)
T PRK12936 150 ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKE-AI-MGAIPMKRMGTGAEVASAVAYLA 224 (245)
T ss_pred cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHH-HH-hcCCCCCCCcCHHHHHHHHHHHc
Confidence 46888888766655432 3 68899998765432111000000 00 00111223567899999886543
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.1e-09 Score=91.89 Aligned_cols=135 Identities=15% Similarity=0.024 Sum_probs=86.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC--CceeeccCc---c----c----cCCCCEEEEe
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSLKWT---E----A----TQKFPYVIFC 149 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~--~i~~~~~d~---~----~----~~~~D~Vi~~ 149 (272)
|++++|||+ |.||++++++|.++ |++|++++|++++.+.+... .+..+.+|. + + ...+|.+||+
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ 78 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQ--GWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFN 78 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEc
Confidence 468999996 99999999999999 99999999987766555432 244444442 1 1 2347899999
Q ss_pred cCCCCC-C----C---hHHHH-------HHHH---HH-hcCCCeEEEEecce-eecCCCCCCCCCCCCCCCCCCChHHHH
Q 024143 150 APPSRS-L----D---YPGDV-------RLAA---LS-WNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPIGRSPRTDV 209 (272)
Q Consensus 150 a~~~~~-~----~---~~~~~-------~~l~---~~-~~gvkr~V~~SS~~-vYg~~~~~~~~E~~p~~p~~~~~y~~s 209 (272)
++.... . + +.+.+ .++. .. ..+.+++|++||.. .++. | ....|+.+
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-------------~-~~~~Y~as 144 (240)
T PRK06101 79 AGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELAL-------------P-RAEAYGAS 144 (240)
T ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCC-------------C-CCchhhHH
Confidence 874221 1 1 11111 1111 11 12235799998854 2221 1 12579999
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 210 LLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
|...|.+.+.+ + ++++||+.++++-
T Consensus 145 K~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~ 178 (240)
T PRK06101 145 KAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPL 178 (240)
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCC
Confidence 99998876532 3 6789999998864
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.4e-09 Score=91.20 Aligned_cols=168 Identities=10% Similarity=-0.023 Sum_probs=98.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-cchhhhh----h--CCceeeccCc---c----c-------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELI----N--MGITPSLKWT---E----A-------T 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~~~l~----~--~~i~~~~~d~---~----~-------~ 140 (272)
..+++||||+ |+||++++++|.++ |++|+++.+.. +..+.+. . ..+..+.+|. + + .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAH--GFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3468999997 99999999999999 99999877643 3322221 1 1234444443 1 1 2
Q ss_pred CCCCEEEEecCCCCCC---C-----hHHH----HH---HHH---H---HhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSL---D-----YPGD----VR---LAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~~----~~---~l~---~---~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
..+|+|||+|+..... + +.+. +. .+. . ...+.+++|+++|...+.. .
T Consensus 86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~------------~ 153 (258)
T PRK09134 86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL------------N 153 (258)
T ss_pred CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC------------C
Confidence 4689999999853221 1 1111 11 111 0 1123468888887654321 1
Q ss_pred CCCCChHHHHHHHHHHHHHHcC--------eeEEeeCceecCCCc-HHH-HHHHcCcccCCCCcccccccHHHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYKADRG-AHV-YWLQKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~~--------~~IlRp~~iyG~~~~-~~~-~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
|. ...|+.+|...|.+.+.+. .+.++|+.++..... ... .....+.+.+ ...+++|+|++++.
T Consensus 154 p~-~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~d~a~~~~~ 226 (258)
T PRK09134 154 PD-FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAATPLG------RGSTPEEIAAAVRY 226 (258)
T ss_pred CC-chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhcCCCC------CCcCHHHHHHHHHH
Confidence 21 1479999999888776542 567899988754322 111 1111111111 24778999999887
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
++
T Consensus 227 ~~ 228 (258)
T PRK09134 227 LL 228 (258)
T ss_pred Hh
Confidence 65
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.6e-09 Score=95.31 Aligned_cols=172 Identities=11% Similarity=0.019 Sum_probs=103.4
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhh----hhhCC--ceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINMG--ITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~----l~~~~--i~~~~~d~---~-----------~ 139 (272)
+..+++||||+ |+||++++++|.++ |++|+.+.|+... .+. +...+ +..+..|. + .
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~--G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKE--GADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 34578999997 99999999999999 9999999887532 211 11112 33344442 1 1
Q ss_pred cCCCCEEEEecCCCCC----CC-----hHHHHH-------HHH----HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRS----LD-----YPGDVR-------LAA----LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~----~~-----~~~~~~-------~l~----~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
..++|+|||+|+.... .+ +.+.+. .++ .......++|++||...|....
T Consensus 122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~----------- 190 (290)
T PRK06701 122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE----------- 190 (290)
T ss_pred cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC-----------
Confidence 2468999999985321 11 111111 111 1111236899999988775321
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-H-HHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-H-VYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-~-~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
.. ..|+.+|...+.+++.+ + .+.+||+.++.+.... . ...+. . .........+.+.+|+|++++
T Consensus 191 ~~--~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~dva~~~~ 265 (290)
T PRK06701 191 TL--IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVS--Q-FGSNTPMQRPGQPEELAPAYV 265 (290)
T ss_pred Cc--chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHH--H-HHhcCCcCCCcCHHHHHHHHH
Confidence 01 46889999888776653 2 6789999998764211 0 00000 0 011122345788999999987
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 266 ~ll 268 (290)
T PRK06701 266 FLA 268 (290)
T ss_pred HHc
Confidence 654
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.5e-09 Score=93.89 Aligned_cols=135 Identities=12% Similarity=0.099 Sum_probs=86.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-------CCceeeccCc---c--------ccCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPSLKWT---E--------ATQKFP 144 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-------~~i~~~~~d~---~--------~~~~~D 144 (272)
|++++|||+ |+||.+++++|.++ |++|++++|++++.+.+.. ..++.+..|. + ....+|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d 78 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAA--GARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPD 78 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence 678999996 99999999999999 9999999998765443221 1234444442 1 123579
Q ss_pred EEEEecCCCCCC-----C---hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSL-----D---YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~~-----~---~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
+|||+++..... + +.+.+ ..+. ....+.+++|++||....... + ..
T Consensus 79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~-~~ 145 (243)
T PRK07102 79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR------------A-SN 145 (243)
T ss_pred EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC------------C-CC
Confidence 999999753211 1 11111 0111 123457899999986421110 1 11
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
..|+.+|...+.+.+.. + +.+++|+.++++
T Consensus 146 ~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~ 184 (243)
T PRK07102 146 YVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTP 184 (243)
T ss_pred cccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCh
Confidence 47899999888776543 2 678899999875
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=5e-09 Score=93.68 Aligned_cols=137 Identities=17% Similarity=0.131 Sum_probs=87.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----CC--ceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~~--i~~~~~d~---~-----------~~~ 141 (272)
..++++|||+ |.||++++++|.++ |++|++++|++++.+.+.. .+ +..+..|. + ...
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~--G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARR--GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3478999996 99999999999999 9999999998765544321 12 23333442 1 134
Q ss_pred CCCEEEEecCCCCCCC----------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD----------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~----------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.+|+|||||+...... +...+ +.++ ....+.+++|++||.+++... .|
T Consensus 117 ~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------~p- 187 (293)
T PRK05866 117 GVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA--------SP- 187 (293)
T ss_pred CCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC--------CC-
Confidence 7899999998642211 11111 1111 124567899999997665321 11
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
. .+.|+.+|+..+.+++.. + +++++||.+-.+
T Consensus 188 -~--~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~ 228 (293)
T PRK05866 188 -L--FSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATP 228 (293)
T ss_pred -C--cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCc
Confidence 1 257999999988776553 2 577888876443
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.7e-09 Score=97.00 Aligned_cols=147 Identities=12% Similarity=-0.011 Sum_probs=88.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhh----CCceeeccCc---c-----------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN----MGITPSLKWT---E-----------A 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~----~~i~~~~~d~---~-----------~ 139 (272)
..++|+|||+ |+||++++++|.++ |++|+++.|++++... +.. ..+..+..|. + .
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAK--GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 4478999996 99999999999999 9999999998654332 211 1233444443 1 1
Q ss_pred cCCCCEEEEecCCCCC------CChHHH-----------HHHHH--HHhcCCCeEEEEecceee--cCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRS------LDYPGD-----------VRLAA--LSWNGEGSFLFTSSSAIY--DCSDNGACDEDSPV 198 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~------~~~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vY--g~~~~~~~~E~~p~ 198 (272)
..++|+|||+|+.... +++... +..++ ....+.+++|++||...+ +........++.+.
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~ 172 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRY 172 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCC
Confidence 2468999999985321 111111 11222 123456799999998644 32111111122222
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C----eeEEeeCceecC
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G----GCVLRLAGLYKA 233 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~----~~IlRp~~iyG~ 233 (272)
.+. ..|+.+|+..|.+.+.+ + .+.+.||.+..+
T Consensus 173 ~~~--~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 173 NRV--AAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred CcH--HHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 232 68999999988777653 2 233579887644
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3e-09 Score=95.26 Aligned_cols=171 Identities=11% Similarity=0.032 Sum_probs=101.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc--hh----hhhhCC--ceeeccCc---c-----------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HD----ELINMG--ITPSLKWT---E-----------A 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~--~~----~l~~~~--i~~~~~d~---~-----------~ 139 (272)
..+++||||+ |+||++++++|.++ |++|+...++.+. .+ .+...+ +..+.+|. + .
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFARE--GADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 4478999996 99999999999999 9999987765432 11 122222 23333442 1 1
Q ss_pred cCCCCEEEEecCCCCC-C---C-----hHHHHH-------HHHH---H-hcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRS-L---D-----YPGDVR-------LAAL---S-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~-~---~-----~~~~~~-------~l~~---~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
+.++|+|||+|+.... . + +.+.+. .++. . ...-.++|++||...|....
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 200 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP----------- 200 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC-----------
Confidence 3479999999985321 1 1 111111 1111 1 11235999999988775321
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH---HHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA---HVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~---~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
.. ..|+.+|...|.+++.+ + +.+++|+.++++.... ....+.. .........+.+.+|+|.++
T Consensus 201 ~~--~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~---~~~~~p~~r~~~p~dva~~~ 275 (300)
T PRK06128 201 TL--LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPD---FGSETPMKRPGQPVEMAPLY 275 (300)
T ss_pred Cc--hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHH---HhcCCCCCCCcCHHHHHHHH
Confidence 11 47999999998877653 3 6789999999874211 0011110 01111222366889999887
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+..+
T Consensus 276 ~~l~ 279 (300)
T PRK06128 276 VLLA 279 (300)
T ss_pred HHHh
Confidence 7543
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.5e-09 Score=92.03 Aligned_cols=166 Identities=10% Similarity=-0.028 Sum_probs=101.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh---hCCceeeccCc---c-----------ccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---NMGITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~---~~~i~~~~~d~---~-----------~~~~~D~ 145 (272)
.++++|||+ |.||++++++|.++ |++|+++.|++....... ...+..+..|. + ....+|+
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAK--GARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999997 99999999999999 999999999765322111 11223333332 1 1347899
Q ss_pred EEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceee-cCCCCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIY-DCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vY-g~~~~~~~~E~~p~~p~~~ 203 (272)
|||+++...... +.+.+ ..+. ....+.+++|++||...+ +.. ..
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~-- 158 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE------------RH-- 158 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC------------CC--
Confidence 999998643211 11111 1111 112356899999997532 211 11
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-----HHHHHHcCcccCCCCcccccccHHHHHHHHHH
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-----HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-----~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
..|+.+|...|.+.+.. + ...++|+.+..+.... ....+.++ .....+.+.+|+|++++.
T Consensus 159 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~va~~~~~ 232 (255)
T PRK06841 159 VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKL------IPAGRFAYPEEIAAAALF 232 (255)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhc------CCCCCCcCHHHHHHHHHH
Confidence 47999999888766543 2 5778999887653211 00111111 112347899999999876
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
.+
T Consensus 233 l~ 234 (255)
T PRK06841 233 LA 234 (255)
T ss_pred Hc
Confidence 54
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.5e-09 Score=91.11 Aligned_cols=167 Identities=11% Similarity=-0.020 Sum_probs=97.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC-Ccchhh----hhhCC--ceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDE----LINMG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~-~~~~~~----l~~~~--i~~~~~d~---~-----------~~~ 141 (272)
+++++|||+ |.||++++++|+++ |++|+.+.|+ .+..+. +...+ +.....|. + ...
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQ--GFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999997 99999999999999 9999988654 333222 22122 33333442 1 124
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.+|+|||+++...... +.+.+ ..+. ....+ .+++|++||..... +..
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~-----------~~~ 148 (256)
T PRK12743 80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT-----------PLP 148 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC-----------CCC
Confidence 6899999998643211 11111 0111 01222 36899999964211 111
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH--H--HHHHcCcccCCCCcccccccHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH--V--YWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~--~--~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
+. ..|+.+|...+.+++.+ + .+.++|+.++.+..... . .....+.+. ..+.+.+|++.+
T Consensus 149 ~~--~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~ 220 (256)
T PRK12743 149 GA--SAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPL------GRPGDTHEIASL 220 (256)
T ss_pred Cc--chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCC------CCCCCHHHHHHH
Confidence 22 58999999988876643 2 67899999998743211 0 011111111 124577999988
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
+...+
T Consensus 221 ~~~l~ 225 (256)
T PRK12743 221 VAWLC 225 (256)
T ss_pred HHHHh
Confidence 76543
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.7e-09 Score=88.83 Aligned_cols=166 Identities=12% Similarity=-0.020 Sum_probs=100.0
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C-CceeeccCc---c-----------ccCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-GITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~-~i~~~~~d~---~-----------~~~~~ 143 (272)
.++|+|+|+ |+||.++++.|.++ |++|++++|++++.+.+.. . .+..+..|. + ...++
T Consensus 5 ~~~vlItGa~g~iG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 5 GKKVAIIGVSEGLGYAVAYFALKE--GAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 468999997 99999999999999 9999999998776544321 1 344444442 1 13457
Q ss_pred CEEEEecCCCCCCC--hHHHHHH---------------HHHHhcCCCeEEEEeccee-ecCCCCCCCCCCCCCCCCCCCh
Q 024143 144 PYVIFCAPPSRSLD--YPGDVRL---------------AALSWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVPIGRSP 205 (272)
Q Consensus 144 D~Vi~~a~~~~~~~--~~~~~~~---------------l~~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~p~~p~~~~~ 205 (272)
|.+||+++...... ..+.+.. ++.....-.++|++||... ++. ..+. ..
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~--~~ 149 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA-----------SPDQ--LS 149 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC-----------CCCc--hH
Confidence 99999997533211 0111111 1111112357999998653 211 1122 57
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 206 y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+.+|...+.+++.+ + ++++||++++++...... ... .. .....++..+|++++++.++
T Consensus 150 Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~--~~~--~~---~~~~~~~~~~~va~~~~~~~ 217 (238)
T PRK05786 150 YAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERN--WKK--LR---KLGDDMAPPEDFAKVIIWLL 217 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh--hhh--hc---cccCCCCCHHHHHHHHHHHh
Confidence 999998887665432 3 789999999987422111 010 00 00112466789988887664
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.3e-08 Score=87.45 Aligned_cols=169 Identities=12% Similarity=0.051 Sum_probs=99.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC-Ccchhhhh-hCCceeeccCc---c-------ccCCCCEEEEe
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELI-NMGITPSLKWT---E-------ATQKFPYVIFC 149 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~-~~~~~~l~-~~~i~~~~~d~---~-------~~~~~D~Vi~~ 149 (272)
..++|||||+ |.||++++++|.++ |++|+.+.|+ +++.+.+. ..+...+..|. + ....+|++||+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTD--GANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence 3478999997 99999999999999 9999887653 34433332 22444444442 1 12458999999
Q ss_pred cCCCCCCC--------hHHHHH-------HH----HHHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHH
Q 024143 150 APPSRSLD--------YPGDVR-------LA----ALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (272)
Q Consensus 150 a~~~~~~~--------~~~~~~-------~l----~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk 210 (272)
++...... +.+.+. .+ +......+++|++||..... .+..+. ..|+.+|
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~--~~Y~~sK 150 (237)
T PRK12742 83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----------MPVAGM--AAYAASK 150 (237)
T ss_pred CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----------CCCCCC--cchHHhH
Confidence 98643211 111111 01 11112346999999965311 111122 6799999
Q ss_pred HHHHHHHHHc-------C--eeEEeeCceecCCCc---HHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 211 LKAEKVILEF-------G--GCVLRLAGLYKADRG---AHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 211 ~~aE~~l~~~-------~--~~IlRp~~iyG~~~~---~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+..|.+++.. + +.+++|+.+..+... +....+.+..+ ...+...+|+++++...+
T Consensus 151 aa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~------~~~~~~p~~~a~~~~~l~ 217 (237)
T PRK12742 151 SALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHSFMA------IKRHGRPEEVAGMVAWLA 217 (237)
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHHHHhcCC------CCCCCCHHHHHHHHHHHc
Confidence 9999877653 2 678999988755321 11111111111 112467789988876543
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.6e-09 Score=92.90 Aligned_cols=137 Identities=12% Similarity=-0.008 Sum_probs=89.0
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh------CCceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~------~~i~~~~~d~---~-----------~~~~ 142 (272)
.++|+|||+ |+||++++++|.++ |++|+++.|++++.+.+.. ..+..+..|. + ....
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQA--GAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 478999996 99999999999999 9999999998776544321 1233343442 1 1246
Q ss_pred CCEEEEecCCCCCCC--------hHHHH-------HH----HH--HHhc--------CCCeEEEEecceeecCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDV-------RL----AA--LSWN--------GEGSFLFTSSSAIYDCSDNGACD 193 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-------~~----l~--~~~~--------gvkr~V~~SS~~vYg~~~~~~~~ 193 (272)
+|+|||+++...... +...+ .. ++ .... ...++|++||...+...
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------ 160 (258)
T PRK06949 87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL------ 160 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC------
Confidence 899999998532110 11111 00 11 0111 13589999998765321
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCC
Q 024143 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADR 235 (272)
Q Consensus 194 E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~ 235 (272)
.+. +.|+.+|...|.+++.+ + ++++|||.++++..
T Consensus 161 -----~~~--~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~ 204 (258)
T PRK06949 161 -----PQI--GLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN 204 (258)
T ss_pred -----CCc--cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence 112 58999999888877653 2 68899999998753
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.3e-09 Score=91.68 Aligned_cols=138 Identities=12% Similarity=0.025 Sum_probs=90.5
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C----CceeeccCc---c-----------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M----GITPSLKWT---E----------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~----~i~~~~~d~---~----------- 138 (272)
+..++++|||+ |.||+.+++.|.++ |++|++++|+.+..+.+.. . .+..+..|. +
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGL--GADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 34578999997 99999999999999 9999999998765443321 1 233333442 1
Q ss_pred ccCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
...++|+|||+++...... +.+.+ +.++ +...+.+++|++||...+...
T Consensus 85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~---------- 154 (257)
T PRK09242 85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV---------- 154 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC----------
Confidence 2357899999998632111 11111 1111 123456799999998765421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
.+. ..|+.+|...+.+++.. + ...++|+.+..+.
T Consensus 155 -~~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~ 197 (257)
T PRK09242 155 -RSG--APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPL 197 (257)
T ss_pred -CCC--cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcc
Confidence 112 57899999888877653 2 6788999998764
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.9e-09 Score=92.70 Aligned_cols=136 Identities=10% Similarity=0.016 Sum_probs=85.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C--CceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~--~i~~~~~d~---~-----------~~~~ 142 (272)
.++++|||+ |+||+++++.|.++ |++|++++|++++...+.. . .+..+..|. + ...+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED--GFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 367999996 99999999999999 9999999998765433221 1 233333442 1 1347
Q ss_pred CCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
+|+|||+++...... +.+.+ +.+. ....+ ..++|++||...+.... .
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~ 148 (256)
T PRK08643 80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP-----------E 148 (256)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC-----------C
Confidence 899999998632211 11111 1111 11222 36899999976432110 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
.+.|+.+|...|.+.+.+ + .+.++|+.+..+.
T Consensus 149 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 189 (256)
T PRK08643 149 --LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM 189 (256)
T ss_pred --CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence 257999999888766542 2 6789999987654
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=5e-09 Score=90.57 Aligned_cols=166 Identities=17% Similarity=0.114 Sum_probs=102.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC--ceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~--i~~~~~d~---~-----------~~~~ 142 (272)
.++++|||+ |.||..+++.|.++ |++|++++|++++.+... ..+ +..+..|. + ....
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQK--GAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 368999997 99999999999999 999999999876543321 112 23333442 1 1246
Q ss_pred CCEEEEecCCCCC------------CC-----hHHHH-----------HHHH---HHhcCCCeEEEEecceeecCCCCCC
Q 024143 143 FPYVIFCAPPSRS------------LD-----YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGA 191 (272)
Q Consensus 143 ~D~Vi~~a~~~~~------------~~-----~~~~~-----------~~l~---~~~~gvkr~V~~SS~~vYg~~~~~~ 191 (272)
+|+|||+++.... .+ +...+ +.+. .......++|++||...|+..
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~---- 158 (253)
T PRK08217 83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM---- 158 (253)
T ss_pred CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC----
Confidence 8999999984221 10 11000 0011 111233579999998776531
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH----HHHHHcCcccCCCCcccccc
Q 024143 192 CDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----VYWLQKGTVDSRPDHILNLI 258 (272)
Q Consensus 192 ~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~----~~~l~~g~~~~~~~~~~~~I 258 (272)
+. ..|+.+|...|.+++.+ + .+.++|+.+.++..... ...+..+. ....+.
T Consensus 159 --------~~--~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~ 222 (253)
T PRK08217 159 --------GQ--TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMI------PVGRLG 222 (253)
T ss_pred --------CC--chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcC------CcCCCc
Confidence 12 57999999998876643 2 68899999987643211 11122211 223467
Q ss_pred cHHHHHHHHHHHh
Q 024143 259 HYEVNTLVLFIAS 271 (272)
Q Consensus 259 ~v~Dva~ai~~a~ 271 (272)
+.+|+|+++..++
T Consensus 223 ~~~~~a~~~~~l~ 235 (253)
T PRK08217 223 EPEEIAHTVRFII 235 (253)
T ss_pred CHHHHHHHHHHHH
Confidence 8999999987654
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.7e-09 Score=91.31 Aligned_cols=168 Identities=15% Similarity=0.057 Sum_probs=102.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC--ceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~--i~~~~~d~---~-----------~~~ 141 (272)
..+++||||+ |.||++++++|.++ |++|+.++|++++...+ ...+ +.....|. + ...
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~--G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEY--GAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 4478999996 99999999999999 99999999987654432 2112 22333332 1 124
Q ss_pred CCCEEEEecCCCCCC--------ChHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSL--------DYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~--------~~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.+|+|||+++..... ++.+.+ +.+. ....+.+++|++||...... ..+
T Consensus 86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~ 154 (254)
T PRK08085 86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG-----------RDT 154 (254)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC-----------CCC
Confidence 689999999853211 111111 1111 11235679999998753211 011
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
. +.|+.+|...|.+++.+ + ...++||.+..+-... ...++.... ....+...+|++.
T Consensus 155 ~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~------p~~~~~~~~~va~ 226 (254)
T PRK08085 155 I--TPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRT------PAARWGDPQELIG 226 (254)
T ss_pred C--cchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcC------CCCCCcCHHHHHH
Confidence 2 57999999999887764 2 6789999998764211 111122111 1223667899988
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
++...+
T Consensus 227 ~~~~l~ 232 (254)
T PRK08085 227 AAVFLS 232 (254)
T ss_pred HHHHHh
Confidence 776543
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.4e-09 Score=89.54 Aligned_cols=167 Identities=9% Similarity=-0.010 Sum_probs=100.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhhhhh------CCceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELIN------MGITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~l~~------~~i~~~~~d~---~-----------~~~ 141 (272)
+++++|||+ |+||+++++.|.++ |++|+++.|++.. ...+.. ..+.....|. + ...
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLND--GYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEG 79 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 358999996 99999999999999 9999999997531 111111 1133444442 1 134
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-------HH----HH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-------RL----AA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~----l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.+|+|||+++...... +.+.+ .. ++ ....+.++||++||...+... + .
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~---------~--~ 148 (245)
T PRK12824 80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ---------F--G 148 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC---------C--C
Confidence 6899999998643211 11111 11 11 123457899999997765321 0 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH----HHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----VYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~----~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
. ..|+.+|...|.+++.+ + .++++|+.+.++..... ...+.... ....+...+|+++++
T Consensus 149 ~--~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~va~~~ 220 (245)
T PRK12824 149 Q--TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQI------PMKRLGTPEEIAAAV 220 (245)
T ss_pred C--hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcC------CCCCCCCHHHHHHHH
Confidence 1 47999998887766543 2 67899999987643211 11111111 122345678888887
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
...+
T Consensus 221 ~~l~ 224 (245)
T PRK12824 221 AFLV 224 (245)
T ss_pred HHHc
Confidence 6543
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.9e-09 Score=96.05 Aligned_cols=182 Identities=16% Similarity=0.103 Sum_probs=105.8
Q ss_pred CCcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc----c--------ccC
Q 024143 80 GGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT----E--------ATQ 141 (272)
Q Consensus 80 ~~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~----~--------~~~ 141 (272)
....+++|+|+|+ |.+|+.+++.|+++ |+.|+++.|+..+...+.. .+...+..+. + ...
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkr--gf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~ 152 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKR--GFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPK 152 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHC--CCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccc
Confidence 3345678999997 99999999999999 9999999999877665533 1111111110 1 112
Q ss_pred CCCEEEEecCCCCCC-C-------hHHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC-CChHHHHH
Q 024143 142 KFPYVIFCAPPSRSL-D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG-RSPRTDVL 210 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~-~-------~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~-~~~y~~sk 210 (272)
...+++-|++..... + -.++.++++. ...|++|+|++|+.+.-... . ++.... ...+-.+|
T Consensus 153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~------~--~~~~~~~~~~~~~~k 224 (411)
T KOG1203|consen 153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFN------Q--PPNILLLNGLVLKAK 224 (411)
T ss_pred cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccC------C--CchhhhhhhhhhHHH
Confidence 344666666532211 0 1234556552 45799999999886642111 1 111110 12344788
Q ss_pred HHHHHHHHHcC--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 211 LKAEKVILEFG--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 211 ~~aE~~l~~~~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|+.+++.+ ++|+|++...-.........+.+-+-...++..--.|...|+|+.++.++
T Consensus 225 ~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~al 287 (411)
T KOG1203|consen 225 LKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELVAKAL 287 (411)
T ss_pred HhHHHHHHhcCCCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHHHHHH
Confidence 99999999998 89999998764321110000111111111111113577888888877765
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.2e-09 Score=91.34 Aligned_cols=166 Identities=14% Similarity=0.025 Sum_probs=100.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~ 141 (272)
..+++||||+ |.||+.++++|.++ |++|+++.|+ ++.+.+. .. .+..+.+|. + ...
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKA--GADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG 90 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4478999997 99999999999999 9999999987 3322221 11 234444443 1 124
Q ss_pred CCCEEEEecCCCCCC--------ChHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSL--------DYPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~--------~~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.+|++||+++..... ++.+.+. .++ ....+.+++|++||...|.... .
T Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 159 (258)
T PRK06935 91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK-----------F 159 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC-----------C
Confidence 789999999863211 1111111 111 1234567999999987654211 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH------HHHHHcCcccCCCCcccccccHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH------VYWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~------~~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
...|+.+|...|.+.+.+ + +.+++|+.+..+..... ...+.+.. + ...+...+|++.
T Consensus 160 --~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~dva~ 231 (258)
T PRK06935 160 --VPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRI----P--AGRWGEPDDLMG 231 (258)
T ss_pred --chhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcC----C--CCCCCCHHHHHH
Confidence 147999999998877654 2 67899999876532110 01111111 1 123566788888
Q ss_pred HHHHH
Q 024143 266 VLFIA 270 (272)
Q Consensus 266 ai~~a 270 (272)
.+...
T Consensus 232 ~~~~l 236 (258)
T PRK06935 232 AAVFL 236 (258)
T ss_pred HHHHH
Confidence 87654
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.2e-08 Score=90.03 Aligned_cols=136 Identities=13% Similarity=0.099 Sum_probs=89.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC--ceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~--i~~~~~d~---~-----------~~~~ 142 (272)
.++++|||+ |.||++++++|.++ |++|++++|++++.+.+. ..+ +..+.+|. + ....
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARA--GAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 468999996 99999999999999 999999999865543332 112 33344442 1 1347
Q ss_pred CCEEEEecCCCCCC------------------C-----hHHHHH-----------HHH--HHhcCCCeEEEEecceeecC
Q 024143 143 FPYVIFCAPPSRSL------------------D-----YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDC 186 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~------------------~-----~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~ 186 (272)
+|+|||+++..... + +.+.+. .++ ....+.+++|++||...|..
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~ 167 (278)
T PRK08277 88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTP 167 (278)
T ss_pred CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCC
Confidence 89999999842110 0 111110 111 12234679999999876642
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 187 SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 187 ~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
. .+. ..|+.+|...|.+++.+ + +..++|+.+..+.
T Consensus 168 ~-----------~~~--~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~ 211 (278)
T PRK08277 168 L-----------TKV--PAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ 211 (278)
T ss_pred C-----------CCC--chhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence 1 112 57999999999887654 2 5788999998764
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.8e-08 Score=87.71 Aligned_cols=168 Identities=13% Similarity=0.016 Sum_probs=101.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-chhhhhhCCceeeccCc---c-----------ccCCCCEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELINMGITPSLKWT---E-----------ATQKFPYVI 147 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-~~~~l~~~~i~~~~~d~---~-----------~~~~~D~Vi 147 (272)
.++++|||+ |.||++++++|.++ |++|+.+.|+.+ ....+...++..+..|. + ...++|+||
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLRE--GAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 368999997 99999999999999 999998876533 33344333455554442 1 134789999
Q ss_pred EecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 148 FCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 148 ~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
||++...... +...+ +.++ ....+.+++|++||...|+... ... ..|
T Consensus 85 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------~~~--~~Y 152 (255)
T PRK06463 85 NNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA----------EGT--TFY 152 (255)
T ss_pred ECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC----------CCc--cHh
Confidence 9998632111 11111 1111 1224567999999987664210 111 579
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc---------HHHHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG---------AHVYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 207 ~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~---------~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
+.+|...+.+.+.. + +..++|+.+--+-.. .....+.... ....+...+|++++++
T Consensus 153 ~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~va~~~~ 226 (255)
T PRK06463 153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT------VLKTTGKPEDIANIVL 226 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC------CcCCCcCHHHHHHHHH
Confidence 99999988877654 2 577899887432110 0000111111 1223467899999887
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 227 ~l~ 229 (255)
T PRK06463 227 FLA 229 (255)
T ss_pred HHc
Confidence 654
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.2e-08 Score=90.10 Aligned_cols=136 Identities=13% Similarity=0.042 Sum_probs=86.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc---c-----------ccC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~---~-----------~~~ 141 (272)
+..++++|||+ |.||++++++|.++ |++|++++|+++..+.+.. ..+..+..|. + ...
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKH--GAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG 93 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 44578999996 99999999999999 9999999987654433221 1233344442 1 124
Q ss_pred CCCEEEEecCCCCC--C---C-----hHHHHH-------H----HH--HHhcCCCeEEEEeccee-ecCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS--L---D-----YPGDVR-------L----AA--LSWNGEGSFLFTSSSAI-YDCSDNGACDEDSP 197 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~--~---~-----~~~~~~-------~----l~--~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~p 197 (272)
++|+|||+|+.... . + +.+.+. . ++ ....+..++|++||... ++..
T Consensus 94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------- 163 (280)
T PLN02253 94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL---------- 163 (280)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC----------
Confidence 79999999985321 1 1 111110 1 11 01223468899988653 3211
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
.+ ..|+.+|...|.+.+.+ + +..++|+.+..+
T Consensus 164 -~~---~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~ 204 (280)
T PLN02253 164 -GP---HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTA 204 (280)
T ss_pred -CC---cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence 11 47999999999887653 2 577899998765
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.3e-08 Score=87.60 Aligned_cols=136 Identities=10% Similarity=0.053 Sum_probs=89.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~ 141 (272)
..++++|||+ |.||++++++|.++ |++|+.+.|++++.+.+. .. .+..+.+|. + ...
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKA--GATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 3478999997 99999999999999 999999999876543322 22 233444443 1 134
Q ss_pred CCCEEEEecCCCCCC---C-----hHHHHH-----------HHH--HHhcCCCeEEEEeccee-ecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSL---D-----YPGDVR-----------LAA--LSWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~~~~~-----------~l~--~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~p~~ 199 (272)
.+|+|||+++..... + +.+.+. .++ +...+.+++|++||... ++. .
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~ 154 (265)
T PRK07097 87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR------------E 154 (265)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCC------------C
Confidence 689999999864321 1 111110 111 12345789999999642 221 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
+. ..|+.+|...+.+.+.+ + +..++|+.+..+.
T Consensus 155 ~~--~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~ 196 (265)
T PRK07097 155 TV--SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQ 196 (265)
T ss_pred CC--ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccc
Confidence 12 57999999988877664 2 6789999998764
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.7e-09 Score=90.33 Aligned_cols=168 Identities=13% Similarity=0.068 Sum_probs=101.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC--ceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~--i~~~~~d~---~-----------~~~~ 142 (272)
.++++|||+ |.||.+++++|.++ |++|++++|++++.+.+. ..+ +..+..|. + ....
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFARE--GAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 468999997 99999999999999 999999999876654432 112 33333442 1 1247
Q ss_pred CCEEEEecCCCCC-CC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRS-LD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 143 ~D~Vi~~a~~~~~-~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
+|++||+|+.... .. +.+.+ +.++ ....+.+++|++||...+... ..+
T Consensus 84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~----------~~~ 153 (254)
T PRK07478 84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAG----------FPG 153 (254)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccC----------CCC
Confidence 8999999985321 11 11111 1111 123456789999997654311 011
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc-----H-HHHHHHcCcccCCCCcccccccHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-----A-HVYWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~-----~-~~~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
...|+.+|...+.+.+.+ + +..++||.+-.+-.. + ...++.... ....+...+|+|+
T Consensus 154 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~va~ 225 (254)
T PRK07478 154 --MAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLH------ALKRMAQPEEIAQ 225 (254)
T ss_pred --cchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcC------CCCCCcCHHHHHH
Confidence 257999999998777653 2 567899988654211 0 000111111 1123567889998
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
.++..+
T Consensus 226 ~~~~l~ 231 (254)
T PRK07478 226 AALFLA 231 (254)
T ss_pred HHHHHc
Confidence 877654
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.8e-09 Score=90.44 Aligned_cols=171 Identities=13% Similarity=0.050 Sum_probs=101.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc---c-----------ccCCCCE
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~---~-----------~~~~~D~ 145 (272)
+..++|+|||+ |+||++++++|.++ |++|++++|++.+...+.. .+...+..|. + ...++|+
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAE--GATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 34578999997 99999999999999 9999999998765443322 2222333332 1 1246899
Q ss_pred EEEecCCCCC--C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecc-eeecCCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRS--L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSS-AIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 146 Vi~~a~~~~~--~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~-~vYg~~~~~~~~E~~p~~p~ 201 (272)
|||+++.... . + +.+.+ +.++ ....+..++|++||. ++|+.. .+
T Consensus 83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~-----------~~- 150 (255)
T PRK06057 83 AFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA-----------TS- 150 (255)
T ss_pred EEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC-----------CC-
Confidence 9999985321 0 0 11111 1111 122356789999985 445421 01
Q ss_pred CCChHHHHHHHHHHHHHH----c---C--eeEEeeCceecCCCcHHH----HHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 202 GRSPRTDVLLKAEKVILE----F---G--GCVLRLAGLYKADRGAHV----YWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~----~---~--~~IlRp~~iyG~~~~~~~----~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
...|+.+|+..+.+.+. + + .+++||+.+.++...... ....+ .....+ ...+...+|+++++.
T Consensus 151 -~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~a~~~~ 226 (255)
T PRK06057 151 -QISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAAR-RLVHVP--MGRFAEPEEIAAAVA 226 (255)
T ss_pred -CcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHH-HHhcCC--CCCCcCHHHHHHHHH
Confidence 14689999766655443 2 3 688999999877432110 00000 000011 124788999999876
Q ss_pred HH
Q 024143 269 IA 270 (272)
Q Consensus 269 ~a 270 (272)
..
T Consensus 227 ~l 228 (255)
T PRK06057 227 FL 228 (255)
T ss_pred HH
Confidence 54
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.04 E-value=6.9e-09 Score=90.01 Aligned_cols=171 Identities=12% Similarity=-0.012 Sum_probs=99.6
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC--ceeeccCc---c-----------ccCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~--i~~~~~d~---~-----------~~~~~ 143 (272)
++++|||+ |.||.+++++|.++ |++|+.+.|+++....+ ...+ +..+..|. + ....+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD--GFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899996 99999999999999 99999999986544322 2222 33344442 1 12468
Q ss_pred CEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcC-CCeEEEEeccee-ecCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAI-YDCSDNGACDEDSPVVP 200 (272)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~v-Yg~~~~~~~~E~~p~~p 200 (272)
|+|||+++..... + +.+.. +.++ ....+ .+++|++||... ++.. .
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~ 146 (254)
T TIGR02415 79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP------------I 146 (254)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC------------C
Confidence 9999999863221 1 11111 1111 11222 368999998654 2211 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHc--CcccC-------CCCcccccccHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQK--GTVDS-------RPDHILNLIHYEV 262 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~--g~~~~-------~~~~~~~~I~v~D 262 (272)
.+.|+.+|...|.+++.. + ..+++|+.+..+..........+ +.+.+ .......+...+|
T Consensus 147 --~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (254)
T TIGR02415 147 --LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPED 224 (254)
T ss_pred --CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHH
Confidence 257999999998877643 2 57889998865432111100000 00000 0011223678899
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+++++...+
T Consensus 225 ~a~~~~~l~ 233 (254)
T TIGR02415 225 VAGLVSFLA 233 (254)
T ss_pred HHHHHHhhc
Confidence 999887654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=7.3e-09 Score=89.98 Aligned_cols=171 Identities=12% Similarity=0.015 Sum_probs=97.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEe-cCCcchhh----hhhCC--ceeeccCc---c-----------c--
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDE----LINMG--ITPSLKWT---E-----------A-- 139 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~-R~~~~~~~----l~~~~--i~~~~~d~---~-----------~-- 139 (272)
.++++|||+ |+||++++++|.++ |++|++.. |++++... +...+ ......|. + .
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 468999996 99999999999999 99998875 44333322 21111 12222221 0 0
Q ss_pred ----cCCCCEEEEecCCCCCC---C-----hHHHHH-H----------HHHHhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 140 ----TQKFPYVIFCAPPSRSL---D-----YPGDVR-L----------AALSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 140 ----~~~~D~Vi~~a~~~~~~---~-----~~~~~~-~----------l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
..++|++||+|+..... + +.+.+. + ++.......++|++||...+...
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------- 152 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL--------- 152 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC---------
Confidence 12699999999853211 1 111110 1 11011123699999998754321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH--HHHHcCcccCCCCcccccccHHHHHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV--YWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~--~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
.. ...|+.+|+..+.+++.+ + ...+.|+.+..+...... .... ...........+.+.+|+|+
T Consensus 153 --~~--~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~dva~ 226 (252)
T PRK12747 153 --PD--FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMK--QYATTISAFNRLGEVEDIAD 226 (252)
T ss_pred --CC--chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHH--HHHHhcCcccCCCCHHHHHH
Confidence 11 257999999999877653 2 577899999876421100 0000 00000011234678999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
++...+
T Consensus 227 ~~~~l~ 232 (252)
T PRK12747 227 TAAFLA 232 (252)
T ss_pred HHHHHc
Confidence 887654
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.4e-09 Score=91.88 Aligned_cols=179 Identities=12% Similarity=0.033 Sum_probs=113.2
Q ss_pred eEEEEc-CcHHHHHHHH-----HHHhcCC--CCeEEEEecCCcchhhhhhCCceeeccCccccC-CCCEEEEecCCCCC-
Q 024143 86 DLLIVG-PGVLGRLVAE-----QWRQEHP--GCQIYGQTMTADHHDELINMGITPSLKWTEATQ-KFPYVIFCAPPSRS- 155 (272)
Q Consensus 86 ~IlItG-aGfiG~~l~~-----~L~~~~~--g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~-~~D~Vi~~a~~~~~- 155 (272)
+-++-+ .|+|++.|.. ++-+.++ .|+|++++|.+.+... .+...|..-+. .|+.++++++....
T Consensus 14 ~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ri------tw~el~~~Gip~sc~a~vna~g~n~l~ 87 (315)
T KOG3019|consen 14 DAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARI------TWPELDFPGIPISCVAGVNAVGNNALL 87 (315)
T ss_pred cCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCccc------ccchhcCCCCceehHHHHhhhhhhccC
Confidence 344555 4999988776 3433311 3999999998876431 11111111111 34455555543211
Q ss_pred ------CChHHHH--------HHHH---HHhc-CCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024143 156 ------LDYPGDV--------RLAA---LSWN-GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVI 217 (272)
Q Consensus 156 ------~~~~~~~--------~~l~---~~~~-gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l 217 (272)
..+.+.+ ..+. .+.. ..+.+|.+|.+++|-......++|+++-... +...+-..+.|...
T Consensus 88 P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgf--d~~srL~l~WE~aA 165 (315)
T KOG3019|consen 88 PIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGF--DILSRLCLEWEGAA 165 (315)
T ss_pred chhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCCh--HHHHHHHHHHHHHh
Confidence 1122221 2222 1222 2468999999999988767788998875442 44455556777766
Q ss_pred HHcC----eeEEeeCceecCCCcHH-----HHHHHcCcccCCCCcccccccHHHHHHHHHHHhC
Q 024143 218 LEFG----GCVLRLAGLYKADRGAH-----VYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAST 272 (272)
Q Consensus 218 ~~~~----~~IlRp~~iyG~~~~~~-----~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~~ 272 (272)
+..+ .+++|.|.+.|.+.+.+ .+++..|.+++.|.+++.|||++|++..+..|++
T Consensus 166 ~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale 229 (315)
T KOG3019|consen 166 LKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALE 229 (315)
T ss_pred hccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHh
Confidence 6554 79999999999886532 2346677888999999999999999999988764
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-08 Score=89.20 Aligned_cols=166 Identities=13% Similarity=0.013 Sum_probs=98.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-----CceeeccCc---c----------ccCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----GITPSLKWT---E----------ATQKFP 144 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-----~i~~~~~d~---~----------~~~~~D 144 (272)
.++++|||+ |+||+.++++|.++ |++|++++|++++.+.+... .+..+..|. + ....+|
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAA--GARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 468999996 99999999999999 99999999987665444221 334444442 1 134689
Q ss_pred EEEEecCCCCCC---C-----hHHHH-------H----HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSL---D-----YPGDV-------R----LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~~---~-----~~~~~-------~----~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
+|||+++..... + +.+.+ . .+. ....+.+++|++||...+... + ..
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~-~~ 149 (263)
T PRK09072 83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY------------P-GY 149 (263)
T ss_pred EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC------------C-Cc
Confidence 999999864321 1 11111 1 111 112345789999886432111 1 12
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..|+.+|...+.+++.+ + ++.+.|+.+..+...... ..... ......+..+|+|++++.++
T Consensus 150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~-----~~~~~--~~~~~~~~~~~va~~i~~~~ 219 (263)
T PRK09072 150 ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV-----QALNR--ALGNAMDDPEDVAAAVLQAI 219 (263)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc-----ccccc--cccCCCCCHHHHHHHHHHHH
Confidence 57999998877665432 2 567788877554211100 01000 00113567889998887665
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.5e-08 Score=84.36 Aligned_cols=167 Identities=11% Similarity=0.024 Sum_probs=97.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-hh----hhhhCC--ceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HD----ELINMG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~----~l~~~~--i~~~~~d~---~-----------~~~ 141 (272)
.++++|||+ |.||+++++.|.++ |++|+.+.|+... .. .+...+ +..+..|. + ...
T Consensus 5 ~~~vlItG~~~~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 5 NKVAIVTGASRGIGAAIARRLAAD--GFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 468999996 99999999999999 9999887765322 11 122222 33334442 1 124
Q ss_pred CCCEEEEecCCCCCCC--------hHHHHH-------HHH---H-HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDVR-------LAA---L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~~-------~l~---~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
++|+|||+++...... +.+.+. .++ . .....+++|++||...+... .+
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~-- 149 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL-----------PG-- 149 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC-----------CC--
Confidence 7899999998643211 111110 111 0 11123689999986643211 11
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCC----c-HHHHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADR----G-AHVYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~----~-~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
.+.|+.+|...|.+++.. + .++++|+.+-.+.. . .....+.+..+ ..-+.+.+|++++++
T Consensus 150 ~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~d~a~~~~ 223 (245)
T PRK12937 150 YGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAP------LERLGTPEEIAAAVA 223 (245)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCC------CCCCCCHHHHHHHHH
Confidence 257999999999887653 2 57789987754421 1 11111222111 122457799999877
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
.++
T Consensus 224 ~l~ 226 (245)
T PRK12937 224 FLA 226 (245)
T ss_pred HHc
Confidence 654
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.4e-08 Score=86.90 Aligned_cols=163 Identities=10% Similarity=-0.018 Sum_probs=97.0
Q ss_pred EEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-cchh----hhhhCC--ceeeccCc---c----c-------cCCCC
Q 024143 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHD----ELINMG--ITPSLKWT---E----A-------TQKFP 144 (272)
Q Consensus 87 IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~~----~l~~~~--i~~~~~d~---~----~-------~~~~D 144 (272)
|+|||+ |+||+++++.|.++ |++|++++|+. ++.. .+...+ +....+|. + + ...+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKE--GAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 579986 99999999999999 99999998875 2222 122222 33344442 1 1 24689
Q ss_pred EEEEecCCCCCCC--------hHHHH-------HHHHH------HhcCCCeEEEEecce-eecCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSLD--------YPGDV-------RLAAL------SWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-------~~l~~------~~~gvkr~V~~SS~~-vYg~~~~~~~~E~~p~~p~~ 202 (272)
+|||+++...... +.+.+ ..+.. ...+.++||++||.. +|+.. +.
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~------------~~- 145 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA------------GQ- 145 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC------------CC-
Confidence 9999998643210 11111 11111 124567999999964 44421 11
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH----HHHHHcCcccCCCCcccccccHHHHHHHHHH
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----VYWLQKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~----~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
+.|+.+|...|.+.+.+ + .+++||+.+.++..... ...+....+ ..-+.+++|++++++.
T Consensus 146 -~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~ 218 (239)
T TIGR01830 146 -ANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIP------LGRFGTPEEVANAVAF 218 (239)
T ss_pred -chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCC------cCCCcCHHHHHHHHHH
Confidence 57888998777665542 3 68899998866532211 111111111 2236688999998876
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
++
T Consensus 219 ~~ 220 (239)
T TIGR01830 219 LA 220 (239)
T ss_pred Hh
Confidence 54
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.1e-08 Score=88.91 Aligned_cols=136 Identities=15% Similarity=0.086 Sum_probs=86.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----CC--ceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~~--i~~~~~d~---~-----------~~~ 141 (272)
..++++|||+ |+||.+++++|.++ |++|++++|++++.+.+.+ .+ ...+..|. + .+.
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQ--GAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3468999996 99999999999999 9999999998665443322 12 22233332 1 134
Q ss_pred CCCEEEEecCCCCC----CC-----hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS----LD-----YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~----~~-----~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.+|+|||+++.... .+ +.+.+. .++ ....+.+++|++||...+.. ..
T Consensus 85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~ 153 (252)
T PRK07035 85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP-----------GD 153 (252)
T ss_pred CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC-----------CC
Confidence 68999999984210 01 111111 111 12345679999998653221 11
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
+. +.|+.+|...|.+++.+ + +..+.|+.+..+
T Consensus 154 ~~--~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~ 194 (252)
T PRK07035 154 FQ--GIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTK 194 (252)
T ss_pred CC--cchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCc
Confidence 22 57999999999887764 2 577899887543
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.9e-08 Score=85.81 Aligned_cols=166 Identities=13% Similarity=0.061 Sum_probs=96.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC-Ccchhh----hhhCC--ceeeccCc---c-----------ccCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDE----LINMG--ITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~-~~~~~~----l~~~~--i~~~~~d~---~-----------~~~~ 142 (272)
++++|||+ |+||++++++|.++ |++|+...++ +++... +...+ +..+..|. + ....
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAER--GYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGR 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 47999996 99999999999999 9998877643 333222 22112 33333332 1 1246
Q ss_pred CCEEEEecCCCCCC----C-----hHHHHH-------HHH---H---Hhc--C-CCeEEEEeccee-ecCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSL----D-----YPGDVR-------LAA---L---SWN--G-EGSFLFTSSSAI-YDCSDNGACDEDS 196 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~----~-----~~~~~~-------~l~---~---~~~--g-vkr~V~~SS~~v-Yg~~~~~~~~E~~ 196 (272)
+|+|||+++..... + +.+.+. .++ . ... + .+++|++||... |+...
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------- 152 (248)
T PRK06123 81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG-------- 152 (248)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC--------
Confidence 89999999864311 0 111110 111 0 111 1 247999999754 33210
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-----HHHHHHcCcccCCCCcccccccHHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-----HVYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-----~~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
. ...|+.+|...|.+++.+ + ++++||+.++++.... ....+....+. .-+.+++|
T Consensus 153 ---~--~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~d 221 (248)
T PRK06123 153 ---E--YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPM------GRGGTAEE 221 (248)
T ss_pred ---C--ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCC------CCCcCHHH
Confidence 0 135999999999876643 3 7889999999984221 11111111111 11246899
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
++++++..+
T Consensus 222 ~a~~~~~l~ 230 (248)
T PRK06123 222 VARAILWLL 230 (248)
T ss_pred HHHHHHHHh
Confidence 999987654
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.4e-08 Score=99.14 Aligned_cols=177 Identities=12% Similarity=0.062 Sum_probs=104.2
Q ss_pred CCcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--------CCceeeccCc---c---------
Q 024143 80 GGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWT---E--------- 138 (272)
Q Consensus 80 ~~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--------~~i~~~~~d~---~--------- 138 (272)
..+..+++||||+ |+||++++++|.++ |++|++++|+.+....+.. ..+..+..|. +
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~--Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i 487 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAE--GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV 487 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 3345678999996 99999999999999 9999999998665433221 0122333442 1
Q ss_pred --ccCCCCEEEEecCCCCCC---C-----hHHHHH-----------HHH--HHhcC-CCeEEEEecceeecCCCCCCCCC
Q 024143 139 --ATQKFPYVIFCAPPSRSL---D-----YPGDVR-----------LAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDE 194 (272)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~~---~-----~~~~~~-----------~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E 194 (272)
...++|+|||+|+..... + +...+. .++ +...+ ..++|++||...+....
T Consensus 488 ~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~------ 561 (676)
T TIGR02632 488 ALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK------ 561 (676)
T ss_pred HHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC------
Confidence 124799999999864321 1 111110 111 11223 35899999975432110
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCcee-cCCCc---HHHHHHH-cCc-------ccCCCCc
Q 024143 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY-KADRG---AHVYWLQ-KGT-------VDSRPDH 253 (272)
Q Consensus 195 ~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iy-G~~~~---~~~~~l~-~g~-------~~~~~~~ 253 (272)
. ...|+.+|...|.+++.+ + +..++|+.++ |.+.. ....+.. .+. .......
T Consensus 562 -----~--~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 634 (676)
T TIGR02632 562 -----N--ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTL 634 (676)
T ss_pred -----C--CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCC
Confidence 1 268999999999888753 2 5778898887 32210 0000010 000 0111122
Q ss_pred ccccccHHHHHHHHHHHh
Q 024143 254 ILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 254 ~~~~I~v~Dva~ai~~a~ 271 (272)
...+++.+|+|++++..+
T Consensus 635 l~r~v~peDVA~av~~L~ 652 (676)
T TIGR02632 635 LKRHIFPADIAEAVFFLA 652 (676)
T ss_pred cCCCcCHHHHHHHHHHHh
Confidence 344688999999988654
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.9e-08 Score=91.63 Aligned_cols=169 Identities=9% Similarity=0.034 Sum_probs=101.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC--ceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~--i~~~~~d~---~-----------~~~ 141 (272)
..++++|||+ |.||++++++|.++ |++|+++.|++++.+.+. ..+ +..+..|. + ...
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~--G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARR--GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 3468999997 99999999999999 999999999877654332 222 22233332 1 124
Q ss_pred CCCEEEEecCCCCCCC--------hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.+|++||+|+...... +.+.++ .++ ....+..++|++||...|... |
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~------------p 151 (330)
T PRK06139 84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ------------P 151 (330)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC------------C
Confidence 7899999998533211 111111 111 123345789999997754321 1
Q ss_pred CCCChHHHHHHHHHHHH----HHc----C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVI----LEF----G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l----~~~----~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
. ...|+.+|...+.+. .+. + ++.+.|+.+..+........ .... ......++..+|+|++++.+
T Consensus 152 ~-~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~-~~~~----~~~~~~~~~pe~vA~~il~~ 225 (330)
T PRK06139 152 Y-AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY-TGRR----LTPPPPVYDPRRVAKAVVRL 225 (330)
T ss_pred C-chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc-cccc----ccCCCCCCCHHHHHHHHHHH
Confidence 1 257999998654433 332 3 57789999887643211100 0001 11122357889999998876
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 226 ~ 226 (330)
T PRK06139 226 A 226 (330)
T ss_pred H
Confidence 5
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.4e-08 Score=88.88 Aligned_cols=131 Identities=7% Similarity=0.057 Sum_probs=86.0
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------ccCCCCEEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVI 147 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~~~~D~Vi 147 (272)
..+++||||+ |.||++++++|.++ |++|+.++|+..... .+..+..|. + ....+|+||
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~--G~~Vi~~~r~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEE--GSNVINFDIKEPSYN-----DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCccccC-----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3478999997 99999999999999 999999999765432 233333332 1 134799999
Q ss_pred EecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 148 FCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 148 ~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
|+|+..... + +.+.+ +.++ +...+.+++|++||...+... .+. ..|
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y 144 (258)
T PRK06398 78 NNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVT-----------RNA--AAY 144 (258)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCC-----------CCC--chh
Confidence 999853211 1 11111 1111 123456899999998765321 112 689
Q ss_pred HHHHHHHHHHHHHcC--------eeEEeeCceecC
Q 024143 207 TDVLLKAEKVILEFG--------GCVLRLAGLYKA 233 (272)
Q Consensus 207 ~~sk~~aE~~l~~~~--------~~IlRp~~iyG~ 233 (272)
+.+|...|.+.+.+. ...++||.+-.+
T Consensus 145 ~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~ 179 (258)
T PRK06398 145 VTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTP 179 (258)
T ss_pred hhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccch
Confidence 999999998877542 467888877543
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=1e-07 Score=83.02 Aligned_cols=169 Identities=10% Similarity=0.003 Sum_probs=99.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhh----hhhCC--ceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINMG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~----l~~~~--i~~~~~d~---~-----------~~~ 141 (272)
.++++|||+ |.||++++++|.++ |++|++++|+.++ .+. +...+ +..+..|. + ...
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQA--GADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 368999996 99999999999999 9999999987542 222 22222 33333342 1 134
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
..|+|||+++...... +.+.+ +.++ ....+.+++|++||...+..... .+
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------~~ 156 (254)
T PRK06114 86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG---------LL 156 (254)
T ss_pred CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC---------CC
Confidence 6899999998643211 11111 1111 12344679999999764321110 01
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc-H-H---HHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-A-H---VYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~-~-~---~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
. ..|+.+|...+.+.+.. + +.+++||.+..+-.. + . ...+.+..+. ..+...+|++.+
T Consensus 157 ~--~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~------~r~~~~~dva~~ 228 (254)
T PRK06114 157 Q--AHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPM------QRMAKVDEMVGP 228 (254)
T ss_pred c--chHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCC------CCCcCHHHHHHH
Confidence 1 57999999888776653 2 577899998776321 1 0 0111111111 124567899988
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 229 ~~~l~ 233 (254)
T PRK06114 229 AVFLL 233 (254)
T ss_pred HHHHc
Confidence 77544
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.1e-08 Score=84.00 Aligned_cols=169 Identities=12% Similarity=0.092 Sum_probs=100.7
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC--ceeeccCc---c-----------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------AT 140 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~--i~~~~~d~---~-----------~~ 140 (272)
+..++|+|||+ |.||++++++|.++ |++|+.++|+.+..+.+. ..+ +..+..|. + ..
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~--G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 44579999996 99999999999999 999999998765543321 112 22333332 1 13
Q ss_pred CCCCEEEEecCCCCCC--C-----hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSL--D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~--~-----~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.++|+|||+++..... + +.+.+ ..++ ....+..++|++||...+.. ..+
T Consensus 87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~ 155 (255)
T PRK06113 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------NIN 155 (255)
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC-----------CCC
Confidence 4689999999853211 1 11111 0111 11234569999999764311 112
Q ss_pred CCCChHHHHHHHHHHHHHHcC---------eeEEeeCceecCCCc----H-HHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKADRG----A-HVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~~---------~~IlRp~~iyG~~~~----~-~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
. ..|+.+|...|.+++... ..++.|+.+.-+... + ....+.+..+ ...+...+|++++
T Consensus 156 ~--~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~d~a~~ 227 (255)
T PRK06113 156 M--TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTP------IRRLGQPQDIANA 227 (255)
T ss_pred c--chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCC------CCCCcCHHHHHHH
Confidence 2 579999999998887642 567788877544211 1 1111111111 1225678999988
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 228 ~~~l~ 232 (255)
T PRK06113 228 ALFLC 232 (255)
T ss_pred HHHHc
Confidence 77654
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=6.1e-08 Score=86.65 Aligned_cols=168 Identities=13% Similarity=0.071 Sum_probs=99.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc--chhhhh----hCC--ceeeccCc---c-----------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD--HHDELI----NMG--ITPSLKWT---E-----------A 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~--~~~~l~----~~~--i~~~~~d~---~-----------~ 139 (272)
..++++|||+ |.||++++++|.++ |++|++..|+.+ ..+.+. ..+ +..+..|. + .
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~--G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYARE--GADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3368999997 99999999999999 999998876532 222221 112 22333442 1 2
Q ss_pred cCCCCEEEEecCCCCC----CC-----hHHHHH-------HHH---HH-hcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRS----LD-----YPGDVR-------LAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~----~~-----~~~~~~-------~l~---~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
..++|++||+|+.... .+ +.+.+. .++ .. ...-.++|++||...|....
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~----------- 194 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP----------- 194 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC-----------
Confidence 3468999999985321 11 111110 111 01 01236899999988764211
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----H--HHHHHHcCcccCCCCcccccccHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----A--HVYWLQKGTVDSRPDHILNLIHYEVNT 264 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~--~~~~l~~g~~~~~~~~~~~~I~v~Dva 264 (272)
. ...|+.+|...+.+.+.. + +.+++|+.++++... . ....+.+..+ ...+...+|+|
T Consensus 195 ~--~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~r~~~pedva 266 (294)
T PRK07985 195 H--LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTP------MKRAGQPAELA 266 (294)
T ss_pred C--cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCC------CCCCCCHHHHH
Confidence 1 157999999988776543 3 678999999987421 0 1111111111 12256688999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
++++..+
T Consensus 267 ~~~~fL~ 273 (294)
T PRK07985 267 PVYVYLA 273 (294)
T ss_pred HHHHhhh
Confidence 8877543
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.4e-08 Score=84.62 Aligned_cols=169 Identities=14% Similarity=0.014 Sum_probs=99.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C--CceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~--~i~~~~~d~---~-----------~~~~ 142 (272)
.+++||||+ |.||++++++|.++ |++|+++.|++++.+.+.. . .+..+..|. + ....
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEA--GAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 468999997 99999999999999 9999999998766544321 1 233333442 1 1347
Q ss_pred CCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
+|++||+++...... +.+.+ +.++ ....+ -.++|++||...+-.. .|
T Consensus 87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~ 155 (253)
T PRK05867 87 IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN-----------VP 155 (253)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC-----------CC
Confidence 999999998643211 11111 1111 11222 3579999886532100 01
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH---HHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH---VYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~---~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
.....|+.+|...|.+.+.+ + ...++||.+-.+-.... .....+..+ ...+...+|+|++++
T Consensus 156 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~------~~r~~~p~~va~~~~ 229 (253)
T PRK05867 156 QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIP------LGRLGRPEELAGLYL 229 (253)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCC------CCCCcCHHHHHHHHH
Confidence 11157999999999887764 2 56789998865532111 111111111 112567899998876
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 230 ~L~ 232 (253)
T PRK05867 230 YLA 232 (253)
T ss_pred HHc
Confidence 543
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=4e-08 Score=84.96 Aligned_cols=167 Identities=16% Similarity=0.007 Sum_probs=95.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEe-cCCcchhhh----hhC--CceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~-R~~~~~~~l----~~~--~i~~~~~d~---~-----------~~~ 141 (272)
|++|+|||+ |+||+.+++.|.++ |++|+.+. |++++.+.+ ... .+..+.+|. + ...
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAAR--GWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG 79 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 578999997 99999999999999 99998765 444433222 111 233444442 1 124
Q ss_pred CCCEEEEecCCCCC----CC-----hHHHH-----------HHHHH--HhcC---CCeEEEEeccee-ecCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS----LD-----YPGDV-----------RLAAL--SWNG---EGSFLFTSSSAI-YDCSDNGACDED 195 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~----~~-----~~~~~-----------~~l~~--~~~g---vkr~V~~SS~~v-Yg~~~~~~~~E~ 195 (272)
.+|+|||+++.... .+ +...+ +.++. ...+ -.++|++||... ++...
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------- 152 (248)
T PRK06947 80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN------- 152 (248)
T ss_pred CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC-------
Confidence 69999999985321 11 11111 01111 1111 246999998754 33210
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----H-HHHHHHcCcccCCCCcccccccHH
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----A-HVYWLQKGTVDSRPDHILNLIHYE 261 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~-~~~~l~~g~~~~~~~~~~~~I~v~ 261 (272)
. ...|+.+|...+.+.+.+ + ++++||+.+..+... + ......... +. .-....+
T Consensus 153 ----~--~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~----~~--~~~~~~e 220 (248)
T PRK06947 153 ----E--YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQT----PL--GRAGEAD 220 (248)
T ss_pred ----C--CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcC----CC--CCCcCHH
Confidence 1 136899999888765542 3 688999999876321 1 111111101 11 1135679
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+++.++..+
T Consensus 221 ~va~~~~~l~ 230 (248)
T PRK06947 221 EVAETIVWLL 230 (248)
T ss_pred HHHHHHHHHc
Confidence 9999887654
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.8e-08 Score=85.03 Aligned_cols=166 Identities=9% Similarity=0.050 Sum_probs=96.3
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec-CCcch----hhhhhCC--ceeeccCc---c-----------ccCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHH----DELINMG--ITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~----~~l~~~~--i~~~~~d~---~-----------~~~~ 142 (272)
+.++|||+ |+||++++++|.++ |++|++..+ +..+. +.+...+ +....+|. + ...+
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKD--GFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 57899996 99999999999999 999988644 32222 1222222 22233442 1 1347
Q ss_pred CCEEEEecCCCCCCC--------hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|+|||+++...... +.+. ++.++ ....+.+++|++||....... .+
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~- 149 (246)
T PRK12938 82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ-----------FG- 149 (246)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCC-----------CC-
Confidence 899999998643211 1111 11111 123456899999986532110 11
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH----HHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----VYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~----~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
...|+.+|...|.+.+.+ + +..++|+.+..+..... ...+.... ....+...+|++++++
T Consensus 150 -~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~v~~~~~ 222 (246)
T PRK12938 150 -QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATI------PVRRLGSPDEIGSIVA 222 (246)
T ss_pred -ChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcC------CccCCcCHHHHHHHHH
Confidence 257999999877765542 2 67899999987642211 11111111 1122456788888877
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 223 ~l~ 225 (246)
T PRK12938 223 WLA 225 (246)
T ss_pred HHc
Confidence 543
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.9e-08 Score=84.78 Aligned_cols=160 Identities=13% Similarity=0.071 Sum_probs=96.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCC-CeEEEEecCCcc-hhh----hhhC---CceeeccCc---c--------cc--
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADH-HDE----LINM---GITPSLKWT---E--------AT-- 140 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g-~~V~~~~R~~~~-~~~----l~~~---~i~~~~~d~---~--------~~-- 140 (272)
.++|+|||+ |.||++++++|.++ | ++|+++.|++++ .+. +... .++.+..|. + ..
T Consensus 8 ~~~vlItGas~giG~~la~~l~~~--gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYLKN--APARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc--CCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 358999997 99999999999998 6 899999998765 332 2221 234444442 1 11
Q ss_pred CCCCEEEEecCCCCCC-----Ch---HHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSL-----DY---PGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~-----~~---~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|++||+++..... +. .+.+ +.++ +...+.+++|++||...+... +
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~---------~-- 154 (253)
T PRK07904 86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVR---------R-- 154 (253)
T ss_pred CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCC---------C--
Confidence 3799999999764221 10 0011 1111 134467899999997532110 1
Q ss_pred CCCCChHHHHHHHHHHHHH-------HcC--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVIL-------EFG--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~-------~~~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
+ ...|+.+|+..+.+.+ ..+ +++++|+.+.-+-.. +.. +. ...+..+|+|+.++.+
T Consensus 155 ~--~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~-------~~~----~~--~~~~~~~~~A~~i~~~ 219 (253)
T PRK07904 155 S--NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA-------HAK----EA--PLTVDKEDVAKLAVTA 219 (253)
T ss_pred C--CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc-------cCC----CC--CCCCCHHHHHHHHHHH
Confidence 1 1468999987764433 233 789999999754211 000 00 1136788888888776
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 220 ~ 220 (253)
T PRK07904 220 V 220 (253)
T ss_pred H
Confidence 4
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.1e-08 Score=85.01 Aligned_cols=164 Identities=14% Similarity=0.087 Sum_probs=99.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc--------cccCCCCEEEEecCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~--------~~~~~~D~Vi~~a~~~~ 154 (272)
.++++|||+ |.||++++++|.++ |++|++++|++.... ...+.....|. +....+|+|||+++...
T Consensus 5 ~k~~lVtGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~ 79 (235)
T PRK06550 5 TKTVLITGAASGIGLAQARAFLAQ--GAQVYGVDKQDKPDL---SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILD 79 (235)
T ss_pred CCEEEEcCCCchHHHHHHHHHHHC--CCEEEEEeCCccccc---CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCC
Confidence 468999996 99999999999999 999999998754321 12233444442 12457899999998431
Q ss_pred ---C-CC-----hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 024143 155 ---S-LD-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLK 212 (272)
Q Consensus 155 ---~-~~-----~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~ 212 (272)
. .+ +.+.+ ..+. ....+.+++|++||...+... + ....|+.+|..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~-~~~~Y~~sK~a 146 (235)
T PRK06550 80 DYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG------------G-GGAAYTASKHA 146 (235)
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------------C-CCcccHHHHHH
Confidence 1 11 11111 0111 112345789999997654211 0 11468889988
Q ss_pred HHHHHHHc-------C--eeEEeeCceecCCCc-HH-----HHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 213 AEKVILEF-------G--GCVLRLAGLYKADRG-AH-----VYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 213 aE~~l~~~-------~--~~IlRp~~iyG~~~~-~~-----~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.|.+.+.. + .++++|+.+..+... .+ ...+.+.. ....+...+|+|++++.++
T Consensus 147 ~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~~~~~l~ 214 (235)
T PRK06550 147 LAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARET------PIKRWAEPEEVAELTLFLA 214 (235)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccC------CcCCCCCHHHHHHHHHHHc
Confidence 77765542 3 678999999876421 11 01111111 1223566799998887654
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.9e-08 Score=85.17 Aligned_cols=164 Identities=15% Similarity=0.073 Sum_probs=97.1
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC---ceeeccCc----------------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG---ITPSLKWT----------------E 138 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~---i~~~~~d~----------------~ 138 (272)
..++++|||+ |+||.+++++|+++ |++|++++|+.++.+.+. ..+ +..+..|. +
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARH--GATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 4578999996 99999999999999 999999999876543322 111 22222221 1
Q ss_pred ccCCCCEEEEecCCCCC----CC-----hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRS----LD-----YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~----~~-----~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
....+|+|||+|+.... .+ +.+. ++.++ ....+.++||++||...+...
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~--------- 159 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR--------- 159 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC---------
Confidence 23478999999975321 01 1111 11111 123467899999997543211
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHcC---------eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~~---------~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
... ..|+.+|...|.+++.+. .++++|+.+-.+-... .... .....+.-.+|++..+
T Consensus 160 --~~~--~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~----~~~~------~~~~~~~~~~~~~~~~ 225 (247)
T PRK08945 160 --ANW--GAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS----AFPG------EDPQKLKTPEDIMPLY 225 (247)
T ss_pred --CCC--cccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh----hcCc------ccccCCCCHHHHHHHH
Confidence 011 479999999998776541 4677887764432110 0000 0112345668888777
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 226 ~~~~ 229 (247)
T PRK08945 226 LYLM 229 (247)
T ss_pred HHHh
Confidence 6653
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.3e-08 Score=85.31 Aligned_cols=137 Identities=13% Similarity=0.062 Sum_probs=89.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-------cc--CCCCEEEEec
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-------AT--QKFPYVIFCA 150 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-------~~--~~~D~Vi~~a 150 (272)
|++++|||+ |.||++++++|.++ |++|++++|++++.+.+...+++.+..|. + .+ ..+|+|||++
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRAD--GWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhC--CCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECC
Confidence 678999996 99999999999999 99999999987766666555555554442 1 12 2589999999
Q ss_pred CCCCC-----CC-----hHHHH-------HHHH---HH--hcCCCeEEEEecce-eecCCCCCCCCCCCCCCCCCCChHH
Q 024143 151 PPSRS-----LD-----YPGDV-------RLAA---LS--WNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 151 ~~~~~-----~~-----~~~~~-------~~l~---~~--~~gvkr~V~~SS~~-vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
+.... .+ +...+ ..++ .. .....++|++||.. .|+... ..+. ..|+
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------~~~~--~~Y~ 147 (222)
T PRK06953 79 GVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT---------GTTG--WLYR 147 (222)
T ss_pred CcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc---------CCCc--cccH
Confidence 86421 01 11111 1111 01 12235789998864 444211 1111 3699
Q ss_pred HHHHHHHHHHHHcC-------eeEEeeCceecC
Q 024143 208 DVLLKAEKVILEFG-------GCVLRLAGLYKA 233 (272)
Q Consensus 208 ~sk~~aE~~l~~~~-------~~IlRp~~iyG~ 233 (272)
.+|...|.+++.+. +..++|+++.-+
T Consensus 148 ~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~ 180 (222)
T PRK06953 148 ASKAALNDALRAASLQARHATCIALHPGWVRTD 180 (222)
T ss_pred HhHHHHHHHHHHHhhhccCcEEEEECCCeeecC
Confidence 99999998887652 577899988754
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.8e-08 Score=87.96 Aligned_cols=136 Identities=13% Similarity=0.072 Sum_probs=87.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h--CC--ceeeccCc---c-----------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--MG--ITPSLKWT---E-----------A 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~--~~--i~~~~~d~---~-----------~ 139 (272)
..++++|||+ |.||++++++|.++ |++|++++|++++.+.+. . .+ +..+..|. + .
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFARE--GAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3468999997 99999999999999 999999999876554332 1 11 23333442 1 1
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
...+|++||+|+...... +...+ +.++ ....+.+++|++||...+...
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 152 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII----------- 152 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC-----------
Confidence 347999999998532211 11111 1111 122346799999997643211
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
... ..|+.+|...+.+.+.+ + +..++||.+-.+
T Consensus 153 ~~~--~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~ 194 (260)
T PRK07063 153 PGC--FPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQ 194 (260)
T ss_pred CCc--hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCh
Confidence 011 57999999998877654 2 567899987543
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=7.6e-08 Score=83.30 Aligned_cols=167 Identities=16% Similarity=0.136 Sum_probs=97.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec-CCcchhhhhh---CCceeeccCc---c----c-------cCC-C
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELIN---MGITPSLKWT---E----A-------TQK-F 143 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~~~l~~---~~i~~~~~d~---~----~-------~~~-~ 143 (272)
.++++|||+ |+||+++++.|.++ |++|+...+ .+++...+.. ..+..+..|. + + ... +
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFARE--GARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI 82 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 368999996 99999999999999 999988655 3333333221 1233444442 1 1 123 8
Q ss_pred CEEEEecCCCC---------CCC-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSR---------SLD-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 144 D~Vi~~a~~~~---------~~~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
|+|||+++... ..+ +.+.+ +.++ ....+..++|++||...+.
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----------- 151 (253)
T PRK08642 83 TTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN----------- 151 (253)
T ss_pred eEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC-----------
Confidence 99999997421 001 11111 1111 1223467999999854221
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHcC---------eeEEeeCceecCCCc----H-HHHHHHcCcccCCCCcccccccHHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKADRG----A-HVYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~~---------~~IlRp~~iyG~~~~----~-~~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
+..|. +.|+.+|...|.+++.+. ...++||.+--+... . ....+.... ....+.+.+|
T Consensus 152 ~~~~~--~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 223 (253)
T PRK08642 152 PVVPY--HDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATT------PLRKVTTPQE 223 (253)
T ss_pred CCCCc--cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcC------CcCCCCCHHH
Confidence 12233 589999999999887642 466889887543211 1 000111111 1233788899
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+++++...+
T Consensus 224 va~~~~~l~ 232 (253)
T PRK08642 224 FADAVLFFA 232 (253)
T ss_pred HHHHHHHHc
Confidence 999887654
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.4e-08 Score=84.13 Aligned_cols=135 Identities=10% Similarity=0.070 Sum_probs=83.6
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec-CCcchhhhh----hC--CceeeccCc---c-----------ccCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELI----NM--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~~ 142 (272)
+++||||+ |+||++++++|.++ |++|+++.| ++.+.+.+. .. .+..+..|. + ....
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKD--GYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46899996 99999999999999 999999888 333322211 11 233444442 1 1346
Q ss_pred CCEEEEecCCCCCC--------ChHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSL--------DYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~--------~~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|+|||+++..... ++.+.+ +.++ +...+.+++|++||...+... ...
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~ 147 (242)
T TIGR01829 79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ-----------FGQ 147 (242)
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----------CCc
Confidence 89999999854211 011111 1111 123467899999986432111 011
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
..|+.+|...+.+++.+ + ...++|+.+..+.
T Consensus 148 --~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~ 187 (242)
T TIGR01829 148 --TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDM 187 (242)
T ss_pred --chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcc
Confidence 47888998777665543 3 6789999998764
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.1e-07 Score=82.81 Aligned_cols=136 Identities=11% Similarity=-0.029 Sum_probs=84.9
Q ss_pred CCCeEEEEcC-c--HHHHHHHHHHHhcCCCCeEEEEecCCc-----------ch----hhhhhC--CceeeccCc---c-
Q 024143 83 GENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTAD-----------HH----DELINM--GITPSLKWT---E- 138 (272)
Q Consensus 83 ~~~~IlItGa-G--fiG~~l~~~L~~~~~g~~V~~~~R~~~-----------~~----~~l~~~--~i~~~~~d~---~- 138 (272)
.+++|||||+ | .||.+++++|.++ |++|+++.|++. .. ..+... .+..+..|. +
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAK--GIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHc--CCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 3468999997 5 5999999999999 999999988721 11 111111 234444442 1
Q ss_pred ----------ccCCCCEEEEecCCCCCCC--------hHHHH-------HHHH---H---HhcCCCeEEEEecceeecCC
Q 024143 139 ----------ATQKFPYVIFCAPPSRSLD--------YPGDV-------RLAA---L---SWNGEGSFLFTSSSAIYDCS 187 (272)
Q Consensus 139 ----------~~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~---~---~~~gvkr~V~~SS~~vYg~~ 187 (272)
....+|+|||+++...... +.+.+ ..+. . ...+.+++|++||...|...
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~ 161 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM 161 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC
Confidence 1246899999998632211 11111 0111 0 12245699999998765421
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 188 ~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
.+. ..|+.+|...|.+++.. + ++.++|+.+..+
T Consensus 162 -----------~~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~ 203 (256)
T PRK12748 162 -----------PDE--LAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTG 203 (256)
T ss_pred -----------CCc--hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCC
Confidence 112 57999999999887653 2 688999987654
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.4e-08 Score=87.79 Aligned_cols=132 Identities=16% Similarity=-0.007 Sum_probs=84.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC--CceeeccCc---c---c-c-----------CC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSLKWT---E---A-T-----------QK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~--~i~~~~~d~---~---~-~-----------~~ 142 (272)
|++++|||+ |+||++++++|.++ |++|++++|+..+.. .... .+..+..|. + . + ..
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~--G~~v~~~~r~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 77 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQP--GIAVLGVARSRHPSL-AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS 77 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhC--CCEEEEEecCcchhh-hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence 579999997 99999999999999 999999999765321 1111 233333332 1 0 0 25
Q ss_pred CCEEEEecCCCCC-C---C-----hHH-------H----HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRS-L---D-----YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 143 ~D~Vi~~a~~~~~-~---~-----~~~-------~----~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.|++||+++.... . + +.+ . .+.++ ....+.+++|++||...+... .+
T Consensus 78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~ 146 (243)
T PRK07023 78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY-----------AG 146 (243)
T ss_pred ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC-----------CC
Confidence 7899999985321 0 0 111 0 11111 123456799999998765321 12
Q ss_pred CCCChHHHHHHHHHHHHHHc------C--eeEEeeCcee
Q 024143 201 IGRSPRTDVLLKAEKVILEF------G--GCVLRLAGLY 231 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~------~--~~IlRp~~iy 231 (272)
. ..|+.+|...|.+++.+ + ..+++|+.+-
T Consensus 147 ~--~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~ 183 (243)
T PRK07023 147 W--SVYCATKAALDHHARAVALDANRALRIVSLAPGVVD 183 (243)
T ss_pred c--hHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccc
Confidence 2 68999999999888743 2 5678888774
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=9.3e-08 Score=83.10 Aligned_cols=134 Identities=13% Similarity=0.147 Sum_probs=83.7
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh------CCceeeccCc---c-----------ccCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~------~~i~~~~~d~---~-----------~~~~~ 143 (272)
++++|||+ |.||+++++.|.++ |++|++++|++++.+.+.. ..+..+..|. + .+..+
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEE--GANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 68999996 99999999999999 9999999998765443321 1233333342 1 13478
Q ss_pred CEEEEecCCCCC---CC-----hHHHHH-----------HHHH--HhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRS---LD-----YPGDVR-----------LAAL--SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 144 D~Vi~~a~~~~~---~~-----~~~~~~-----------~l~~--~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
|+|||+++.... .+ +.+.++ .++. ...+ ..++|++||...+... +
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------~- 146 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG------------P- 146 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC------------C-
Confidence 999999974321 11 111111 1110 1222 4689999987532211 0
Q ss_pred CCChHHHHHHHHHHHHHH--------cC--eeEEeeCceecC
Q 024143 202 GRSPRTDVLLKAEKVILE--------FG--GCVLRLAGLYKA 233 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~--------~~--~~IlRp~~iyG~ 233 (272)
....|+.+|...+.+.+. .+ ...++||.+..+
T Consensus 147 ~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~ 188 (252)
T PRK07677 147 GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT 188 (252)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence 114688899888877653 23 578999998753
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.3e-08 Score=85.17 Aligned_cols=164 Identities=14% Similarity=0.058 Sum_probs=97.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C---CceeeccCc-----c-----------
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M---GITPSLKWT-----E----------- 138 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~---~i~~~~~d~-----~----------- 138 (272)
..++++|||+ |+||+++++.|.++ |++|++++|++++.+.+.. . .......|. +
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAA--GATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 3468999996 99999999999999 9999999998765543311 1 111111111 0
Q ss_pred cc-CCCCEEEEecCCCCC----CC-----hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCC
Q 024143 139 AT-QKFPYVIFCAPPSRS----LD-----YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDED 195 (272)
Q Consensus 139 ~~-~~~D~Vi~~a~~~~~----~~-----~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (272)
.. ..+|+|||+|+.... .+ +.+.+. .++ ....+..++|++||.....
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~---------- 152 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET---------- 152 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc----------
Confidence 12 468999999985311 11 111111 111 1233467999999854211
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc--------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHH
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF--------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~--------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
+... ...|+.+|+..|.+++.+ + +.+++||.++++..... ..+. ........+|++.
T Consensus 153 -~~~~--~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~----~~~~------~~~~~~~~~~~~~ 219 (239)
T PRK08703 153 -PKAY--WGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS----HPGE------AKSERKSYGDVLP 219 (239)
T ss_pred -CCCC--ccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc----CCCC------CccccCCHHHHHH
Confidence 1111 257999999999887543 2 57889999998753210 0111 1112456777777
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
.+...+
T Consensus 220 ~~~~~~ 225 (239)
T PRK08703 220 AFVWWA 225 (239)
T ss_pred HHHHHh
Confidence 665443
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=3e-08 Score=86.14 Aligned_cols=171 Identities=12% Similarity=0.002 Sum_probs=100.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhC--CceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~--~i~~~~~d~---~-----------~~~~ 142 (272)
.++++|||+ |.||++++++|.++ |++|+++.|++++.+.+ ... .+..+..|. + ....
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFARE--GAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 478999997 99999999999999 99999999987654332 111 233333442 1 1246
Q ss_pred CCEEEEecCCCCC-C--------ChHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRS-L--------DYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 143 ~D~Vi~~a~~~~~-~--------~~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
+|+|||+++.... . ++.+.+ +.++ ....+..++|++||...+.... .
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-----------~ 153 (253)
T PRK06172 85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP-----------K 153 (253)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------C
Confidence 7999999985321 1 111111 1111 1123457899999987664311 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH---HHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV---YWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~---~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
. ..|+.+|...|.+.+.+ + +..+.||.+-.+...... ..... .. ........+...+|+++.++
T Consensus 154 ~--~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~p~~ia~~~~ 229 (253)
T PRK06172 154 M--SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAE-FA-AAMHPVGRIGKVEEVASAVL 229 (253)
T ss_pred C--chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHH-HH-hccCCCCCccCHHHHHHHHH
Confidence 2 57999999988777653 2 567899887543211110 00000 00 00011123567899998877
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 230 ~l~ 232 (253)
T PRK06172 230 YLC 232 (253)
T ss_pred HHh
Confidence 654
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.6e-08 Score=97.30 Aligned_cols=137 Identities=15% Similarity=0.054 Sum_probs=91.1
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~ 141 (272)
..++++|||+ |.||++++++|.++ |++|++++|++++.+.+. .. .+..+.+|. + ...
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEA--GATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG 447 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 3568999996 99999999999999 999999999876654332 11 233334442 1 123
Q ss_pred CCCEEEEecCCCCCC----------ChHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSL----------DYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~----------~~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.+|++||+|+..... ++...+ +.++ +...+.+++|++||.+.|....
T Consensus 448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 517 (657)
T PRK07201 448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP---------- 517 (657)
T ss_pred CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC----------
Confidence 689999999853211 111111 1111 1234567999999988775321
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
. .+.|+.+|...|.+.+.+ + +++++||.+..+-
T Consensus 518 -~--~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~ 559 (657)
T PRK07201 518 -R--FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPM 559 (657)
T ss_pred -C--cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccc
Confidence 1 257999999999877653 2 6889999987653
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=8.1e-08 Score=84.29 Aligned_cols=171 Identities=6% Similarity=-0.032 Sum_probs=98.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhC--CceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~--~i~~~~~d~---~-----------~~~~ 142 (272)
.++++|||+ |.||++++++|.++ |++|++++|++++...+ ... .+..+..|. + ...+
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARA--GANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 468999997 99999999999999 99999999986654332 111 222333332 1 1346
Q ss_pred CCEEEEecCCCCCC---C-----hHHHH-------HHHHH---H--hcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSL---D-----YPGDV-------RLAAL---S--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~~~-------~~l~~---~--~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
+|+|||+++..... + +.+.+ ..+.. . ....+++|++||...+.. . | .
T Consensus 87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~-----------~-~-~ 153 (264)
T PRK07576 87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP-----------M-P-M 153 (264)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC-----------C-C-C
Confidence 89999999742211 0 11111 11110 0 112269999999754321 0 1 1
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcc---cCCCCcccccccHHHHHHHHHHH
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
...|+.+|...|.+++.. + .+.++|+.+.+.... ...+..... .........+...+|+|++++..
T Consensus 154 ~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 231 (264)
T PRK07576 154 QAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM--ARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFL 231 (264)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH--hhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 257999999999888754 2 578899988643210 000000000 00001123356789999887765
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 232 ~ 232 (264)
T PRK07576 232 A 232 (264)
T ss_pred c
Confidence 4
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.7e-08 Score=85.11 Aligned_cols=130 Identities=15% Similarity=0.078 Sum_probs=84.5
Q ss_pred EEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc---c-------ccCCCCEEEEecC
Q 024143 88 LIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-------ATQKFPYVIFCAP 151 (272)
Q Consensus 88 lItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~---~-------~~~~~D~Vi~~a~ 151 (272)
+|||+ |+||++++++|.++ |++|++++|++++...+.. .+++.+..|. + ....+|++||+++
T Consensus 1 lItGas~~iG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAE--GARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 58986 99999999999999 9999999998665443221 2344444543 1 2346899999998
Q ss_pred CCCCCC--------hHHHHH-------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024143 152 PSRSLD--------YPGDVR-------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (272)
Q Consensus 152 ~~~~~~--------~~~~~~-------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE 214 (272)
...... +.+.+. .+. ....+.+++|++||...|... .+. +.|+.+|...|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~-----------~~~--~~Y~~sK~a~~ 145 (230)
T PRK07041 79 DTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS-----------ASG--VLQGAINAALE 145 (230)
T ss_pred CCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC-----------Ccc--hHHHHHHHHHH
Confidence 533211 111111 111 112346799999998876421 122 68999999999
Q ss_pred HHHHHcC-------eeEEeeCceec
Q 024143 215 KVILEFG-------GCVLRLAGLYK 232 (272)
Q Consensus 215 ~~l~~~~-------~~IlRp~~iyG 232 (272)
.+.+.+. .+.++|+.+-.
T Consensus 146 ~~~~~la~e~~~irv~~i~pg~~~t 170 (230)
T PRK07041 146 ALARGLALELAPVRVNTVSPGLVDT 170 (230)
T ss_pred HHHHHHHHHhhCceEEEEeeccccc
Confidence 8887653 56677877643
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.7e-08 Score=86.18 Aligned_cols=134 Identities=13% Similarity=0.068 Sum_probs=86.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhhC--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~~--~i~~~~~d~---~-----------~~~ 141 (272)
..+++||||+ |.||++++++|.++ |++|++++|+ ++... +... .+..+..|. + ...
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~--G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQE--GAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 3478999997 99999999999999 9999999998 44332 2111 233444442 1 134
Q ss_pred CCCEEEEecCCCCC-C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~-~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.+|++||+|+.... . + +.+.+ +.++ ....+ .++|++||...+...
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------------ 148 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAAD------------ 148 (272)
T ss_pred CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCC------------
Confidence 68999999986421 1 1 11111 0111 11233 799999997654321
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
+ ....|+.+|...+.+++.+ + +..+.||.+..+
T Consensus 149 ~-~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~ 190 (272)
T PRK08589 149 L-YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETP 190 (272)
T ss_pred C-CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCc
Confidence 0 1157999999999887754 2 578899988654
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.5e-07 Score=82.06 Aligned_cols=173 Identities=13% Similarity=0.004 Sum_probs=95.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc----chhh----hhhC--CceeeccCc---c-----------
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD----HHDE----LINM--GITPSLKWT---E----------- 138 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~----~~~~----l~~~--~i~~~~~d~---~----------- 138 (272)
.++++|||+ |.||+++++.|.++ |++|+.+.+... ..+. +... .+..+..|. +
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~--G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQ--GAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHC--CCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 468999996 99999999999999 999777765432 1111 1111 233344442 1
Q ss_pred ccCCCCEEEEecCCCCCC---C-----hHHHHH-H------HHH---Hh-cCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRSL---D-----YPGDVR-L------AAL---SW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~---~-----~~~~~~-~------l~~---~~-~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
...++|++||+|+..... + +.+.+. + ++. .. ...+++++++|..+....
T Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~------------ 153 (257)
T PRK12744 86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT------------ 153 (257)
T ss_pred hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC------------
Confidence 134789999999863211 1 111110 1 111 11 123567776443322110
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH--HHHHHc-Ccc-cCCCCcccccccHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH--VYWLQK-GTV-DSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~--~~~l~~-g~~-~~~~~~~~~~I~v~Dva~a 266 (272)
| ..+.|+.+|...|.+.+.+ + +++++||.+..+...+. ...... ... ...+.....+.+.+|++++
T Consensus 154 ~-~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 232 (257)
T PRK12744 154 P-FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPF 232 (257)
T ss_pred C-CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHH
Confidence 1 1257999999999887764 2 57899999876531110 000000 000 0111112247889999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
+...+
T Consensus 233 ~~~l~ 237 (257)
T PRK12744 233 IRFLV 237 (257)
T ss_pred HHHhh
Confidence 87654
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.5e-08 Score=82.33 Aligned_cols=138 Identities=15% Similarity=0.127 Sum_probs=85.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-CceeeccCc---c-------cc--CCCCEEEEe
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWT---E-------AT--QKFPYVIFC 149 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i~~~~~d~---~-------~~--~~~D~Vi~~ 149 (272)
|++++|||+ |+||++++++|.++ |++|++++|++.+.+.+... ++.....|. + .+ .++|+|||+
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLER--GWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhC--CCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 578999996 99999999999999 99999999987765544321 233333332 1 11 368999999
Q ss_pred cCCCCC-----CC-hHHHH---------------HHHHH-HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 150 APPSRS-----LD-YPGDV---------------RLAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 150 a~~~~~-----~~-~~~~~---------------~~l~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
++.... .+ ..+.. +.++. ...+..+++++||. ++... . .+..+. ..|+
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~~-~-----~~~~~~--~~Y~ 148 (225)
T PRK08177 79 AGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSVE-L-----PDGGEM--PLYK 148 (225)
T ss_pred CcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--ccccc-c-----CCCCCc--cchH
Confidence 975321 11 01111 11111 11234678888874 33211 0 011122 4699
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 208 ~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
.+|...|.+++.+ + +..++||.+-.+
T Consensus 149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 9999999888754 2 577899988554
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.4e-07 Score=84.24 Aligned_cols=170 Identities=11% Similarity=0.010 Sum_probs=102.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-C--C--ceeeccCc---c-----------ccCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M--G--ITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~--~--i~~~~~d~---~-----------~~~~ 142 (272)
..++++|||+ |.||..+++.|.++ |++|+++.|++++.+.+.. . + +..+..|. + ....
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHAR--GAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3478999997 99999999999999 9999999998776544322 1 1 22222332 1 1357
Q ss_pred CCEEEEecCCCCCCC--------hHHHHH-----------HHHH-HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDVR-----------LAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~~-----------~l~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
+|+|||+++...... +.+.+. .++. ......++|++||...+.... .
T Consensus 86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~-- 152 (296)
T PRK05872 86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP-----------G-- 152 (296)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC-----------C--
Confidence 899999998643211 111111 1110 012346899999987653211 1
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
...|+.+|...|.+.+.. + ..++.|+.+..+.... ....+.... +.....++..+|+++++
T Consensus 153 ~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~----~~p~~~~~~~~~va~~i 228 (296)
T PRK05872 153 MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARL----PWPLRRTTSVEKCAAAF 228 (296)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhC----CCcccCCCCHHHHHHHH
Confidence 257999999998877643 2 5678998886542110 000111111 11122357789999998
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 229 ~~~~ 232 (296)
T PRK05872 229 VDGI 232 (296)
T ss_pred HHHH
Confidence 8765
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.9e-08 Score=95.07 Aligned_cols=136 Identities=12% Similarity=0.072 Sum_probs=88.7
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC--ceeeccCc---c-----------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------AT 140 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~--i~~~~~d~---~-----------~~ 140 (272)
+..+++||||+ |+||++++++|.++ |++|+.++|+.++.+.+. ..+ +..+..|. + ..
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFARE--GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 45578999997 99999999999999 999999999876554332 122 33444442 1 12
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcC-CCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
..+|+|||+|+...... +...+ .++. +...+ ..++|++||...|....
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------- 460 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR---------- 460 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC----------
Confidence 36899999998643211 11111 1111 11233 36899999998775321
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceec
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG 232 (272)
+. ..|+.+|...|.+.+.. + ++.++||.+--
T Consensus 461 -~~--~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t 500 (582)
T PRK05855 461 -SL--PAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDT 500 (582)
T ss_pred -CC--cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcc
Confidence 12 68999999888765542 3 67889998743
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=5e-08 Score=85.18 Aligned_cols=137 Identities=12% Similarity=0.070 Sum_probs=85.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh---hhhhC--CceeeccCc---c-----------ccCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---ELINM--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~---~l~~~--~i~~~~~d~---~-----------~~~~ 142 (272)
..++++|||+ |+||++++++|.++ |++|++++|+....+ .+... .+..+.+|. + ....
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARH--GANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3478999996 99999999999999 999999999764221 12222 233444443 1 1347
Q ss_pred CCEEEEecCCCCCCC--------hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|+|||+++...... +.+.+. .++ ....+.+++|++||...... + .+
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------~-~~- 150 (263)
T PRK08226 83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV----------A-DP- 150 (263)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc----------C-CC-
Confidence 899999998632211 111110 111 11234678999998642100 0 01
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
....|+.+|...|.+.+.+ + +..++|+.+.++
T Consensus 151 ~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~ 191 (263)
T PRK08226 151 GETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTP 191 (263)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCH
Confidence 1157999999888777643 2 567899998875
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.3e-08 Score=87.85 Aligned_cols=146 Identities=10% Similarity=0.010 Sum_probs=89.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhh----CCceeeccCc---c-----------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN----MGITPSLKWT---E-----------A 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~----~~i~~~~~d~---~-----------~ 139 (272)
..++++|||+ |.||.+++++|.++ |++|+.+.|+.++... +.. ..+..+..|. + .
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~--G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAA--GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 4578999997 99999999999999 9999999998665432 211 1234444443 1 1
Q ss_pred cCCCCEEEEecCCCCC-------CChHHHH-----------HHHHH-HhcCCCeEEEEecceee-cCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRS-------LDYPGDV-----------RLAAL-SWNGEGSFLFTSSSAIY-DCSDNGACDEDSPVV 199 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~-------~~~~~~~-----------~~l~~-~~~gvkr~V~~SS~~vY-g~~~~~~~~E~~p~~ 199 (272)
...+|++||+|+.... +.+...+ +.++. -..+..++|++||...+ +......++++.+..
T Consensus 91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~ 170 (313)
T PRK05854 91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYA 170 (313)
T ss_pred CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCc
Confidence 3468999999985321 1121111 11110 11235699999998653 321112233333333
Q ss_pred CCCCChHHHHHHHHHHHHHHc---------C--eeEEeeCceec
Q 024143 200 PIGRSPRTDVLLKAEKVILEF---------G--GCVLRLAGLYK 232 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~---------~--~~IlRp~~iyG 232 (272)
+. ..|+.+|+..+.+.+++ + +..+.||.+..
T Consensus 171 ~~--~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T 212 (313)
T PRK05854 171 GM--RAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPT 212 (313)
T ss_pred ch--hhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceecc
Confidence 33 68999999888766543 2 46678888753
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.1e-08 Score=84.89 Aligned_cols=169 Identities=11% Similarity=-0.021 Sum_probs=100.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---CceeeccCc---c-----------ccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~i~~~~~d~---~-----------~~~~~D~ 145 (272)
.++++|||+ |.||++++++|.++ |++|++++|++++.+.+... .+..+.+|. + ....+|+
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAA--GARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 478999996 99999999999999 99999999987655443221 234444443 1 1347899
Q ss_pred EEEecCCCCCC-------ChHHHHH-----------HHHH-HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 146 VIFCAPPSRSL-------DYPGDVR-----------LAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 146 Vi~~a~~~~~~-------~~~~~~~-----------~l~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
+||+++..... ++.+.+. .++. ...+..++|++||...+-... .. ..|
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~--~~Y 150 (261)
T PRK08265 84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT-----------GR--WLY 150 (261)
T ss_pred EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------CC--chh
Confidence 99999853211 1211111 1110 013446899999976432110 11 478
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcc-----cCC-CCcccccccHHHHHHHHHHHh
Q 024143 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTV-----DSR-PDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 207 ~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~-----~~~-~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|...+.+.+.. + +..++|+.+..+-... +..+.. ... ......+...+|+|++++..+
T Consensus 151 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~----~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~ 226 (261)
T PRK08265 151 PASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDE----LSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLC 226 (261)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhh----hcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHc
Confidence 99999888776643 2 6788999876542111 111000 000 001112456799999887654
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.9e-07 Score=80.47 Aligned_cols=168 Identities=10% Similarity=-0.019 Sum_probs=99.1
Q ss_pred CCCeEEEEcC-cH-HHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h----CCceeeccCc---c-----------
Q 024143 83 GENDLLIVGP-GV-LGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N----MGITPSLKWT---E----------- 138 (272)
Q Consensus 83 ~~~~IlItGa-Gf-iG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~----~~i~~~~~d~---~----------- 138 (272)
..++++|||+ |. ||+.+++.|.++ |++|++++|++++.+... . ..+..+..|. +
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEE--GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 3478999996 74 999999999999 999999999876543321 1 1233344442 1
Q ss_pred ccCCCCEEEEecCCCCCC---C-----hHHHHH-----------HHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRSL---D-----YPGDVR-----------LAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~---~-----~~~~~~-----------~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
....+|+|||+++..... + +.+.+. .++ ....+ ..++|++||...+..
T Consensus 94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~---------- 163 (262)
T PRK07831 94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA---------- 163 (262)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC----------
Confidence 124789999999853211 1 111110 111 11223 468888888643211
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-----HHHHHHcCcccCCCCcccccccHHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-----HVYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-----~~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
..+. ..|+.+|...|.+.+.+ + +..++|+.++.+.... ....+....+ ...+...+|
T Consensus 164 -~~~~--~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~------~~r~~~p~~ 234 (262)
T PRK07831 164 -QHGQ--AHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREA------FGRAAEPWE 234 (262)
T ss_pred -CCCC--cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCC------CCCCcCHHH
Confidence 0112 57999999999887643 2 5789999998763211 0111222111 122556788
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|++++..+
T Consensus 235 va~~~~~l~ 243 (262)
T PRK07831 235 VANVIAFLA 243 (262)
T ss_pred HHHHHHHHc
Confidence 888876543
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.7e-07 Score=81.81 Aligned_cols=134 Identities=10% Similarity=0.119 Sum_probs=85.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC-CceeeccCc---c-----------ccCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM-GITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~-~i~~~~~d~---~-----------~~~~~D 144 (272)
|+++|||+ |.||+.++++|.++ |++|+.++|++++.+.+. .. .+..+..|. + ....+|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK--GARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 47999996 99999999999999 999999999876543322 11 233444442 1 135799
Q ss_pred EEEEecCCCCC-----CC-----hHHHH-----------HHHHH---HhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRS-----LD-----YPGDV-----------RLAAL---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 145 ~Vi~~a~~~~~-----~~-----~~~~~-----------~~l~~---~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
+|||+++.... .+ +.+.+ +.++. ...+.+++|++||...+... .+
T Consensus 79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 147 (259)
T PRK08340 79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM-----------PP 147 (259)
T ss_pred EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCC-----------CC
Confidence 99999985321 11 11111 11111 12345799999998754211 11
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
. ..|+.+|...+.+.+.. + +..+.||.+-.+
T Consensus 148 ~--~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~ 187 (259)
T PRK08340 148 L--VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTP 187 (259)
T ss_pred c--hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCc
Confidence 2 57999999888877653 2 456788877544
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=5.5e-08 Score=85.16 Aligned_cols=131 Identities=10% Similarity=0.022 Sum_probs=84.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------ccCCCCEEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVI 147 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~~~~D~Vi 147 (272)
..++++|||+ |.||+++++.|.++ |++|+.++|++.+... ..+..+..|. + ....+|+||
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~--G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLAN--GANVVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3468999996 99999999999999 9999999988665432 2233333332 1 134789999
Q ss_pred EecCCCCCC------------C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 148 FCAPPSRSL------------D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 148 ~~a~~~~~~------------~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
|+|+..... + +.+.+ +.+. ....+..++|++||...+...
T Consensus 83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 152 (266)
T PRK06171 83 NNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS---------- 152 (266)
T ss_pred ECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC----------
Confidence 999853110 0 11111 0111 112345689999997654321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCcee
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iy 231 (272)
.. ...|+.+|...|.+++.. + +.+++||.+.
T Consensus 153 -~~--~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 153 -EG--QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred -CC--CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 01 257999999998877653 2 5788999874
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.1e-08 Score=85.34 Aligned_cols=172 Identities=12% Similarity=0.015 Sum_probs=97.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC---ceeeccCc---c-----------ccCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG---ITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~---i~~~~~d~---~-----------~~~~ 142 (272)
++++|||+ |.||+++++.|.++ |++|+++.|++++.+.. ...+ +.....|. + ....
T Consensus 1 k~vlItGas~giG~~la~~la~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ--GAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 47999996 99999999999999 99999999986554332 1111 11122332 1 2346
Q ss_pred CCEEEEecCCCCCCC--------hHHHHH-------HHHH-------HhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDVR-------LAAL-------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~~-------~l~~-------~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
+|+|||+++...... +...+. .+.. .....+++|++||...+... |
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~------------~ 146 (272)
T PRK07832 79 MDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL------------P 146 (272)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC------------C
Confidence 899999998632211 111110 1110 11224689999997533211 1
Q ss_pred CCCChHHHHHHHHHHHHHH-------cC--eeEEeeCceecCCCcHHHHH-HHcCcc-c-C-CCCcccccccHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILE-------FG--GCVLRLAGLYKADRGAHVYW-LQKGTV-D-S-RPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~-------~~--~~IlRp~~iyG~~~~~~~~~-l~~g~~-~-~-~~~~~~~~I~v~Dva~ai 267 (272)
....|+.+|...+.+.+. .+ +++++||.+.++........ ...... . . ........+..+|+|+++
T Consensus 147 -~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~ 225 (272)
T PRK07832 147 -WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKI 225 (272)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHH
Confidence 124688898866655432 23 68899999987642211000 000000 0 0 000112357899999998
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 226 ~~~~ 229 (272)
T PRK07832 226 LAGV 229 (272)
T ss_pred HHHH
Confidence 8775
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1e-07 Score=82.01 Aligned_cols=133 Identities=14% Similarity=0.062 Sum_probs=84.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch-hhhhhCCceeeccCc---c-----------ccCCCCEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELINMGITPSLKWT---E-----------ATQKFPYVI 147 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~-~~l~~~~i~~~~~d~---~-----------~~~~~D~Vi 147 (272)
++++||||+ |.||++++++|.++ |++|++++|+++.. +.+...++..+..|. + ....+|++|
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQ--GQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence 468999997 99999999999999 99999999986542 333334455444442 1 134689999
Q ss_pred EecCCCCCC---C-----hHHHHH-----------HHH--HHhcC--CCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 148 FCAPPSRSL---D-----YPGDVR-----------LAA--LSWNG--EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 148 ~~a~~~~~~---~-----~~~~~~-----------~l~--~~~~g--vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
|+++..... + +.+.+. .++ +...+ ..++|++||....... + . ..
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~---------~--~--~~ 146 (236)
T PRK06483 80 HNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS---------D--K--HI 146 (236)
T ss_pred ECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC---------C--C--Cc
Confidence 999853211 1 111110 111 11222 4689999886532110 0 1 25
Q ss_pred hHHHHHHHHHHHHHHcC--------eeEEeeCcee
Q 024143 205 PRTDVLLKAEKVILEFG--------GCVLRLAGLY 231 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~~--------~~IlRp~~iy 231 (272)
.|+.+|...|.+++.+. +..++|+.+.
T Consensus 147 ~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~ 181 (236)
T PRK06483 147 AYAASKAALDNMTLSFAAKLAPEVKVNSIAPALIL 181 (236)
T ss_pred cHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcee
Confidence 79999999998877542 5678999874
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.1e-08 Score=83.41 Aligned_cols=137 Identities=15% Similarity=0.117 Sum_probs=92.2
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCce--eec---cCc--cccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT--PSL---KWT--EATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~--~~~---~d~--~~~~~~D~Vi~~a~~~ 153 (272)
+.|+..+|.|+ |-.|+.+++.+++.+.=-+|+++.|.+...+.. ...+. .+. ++. ....++|+.+.|.+.+
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTT 94 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-DKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTT 94 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-cceeeeEEechHHHHHHHhhhcCCceEEEeeccc
Confidence 45678999997 999999999999983234899998874211110 11111 111 111 3577999999998865
Q ss_pred CCC---C--------hHHHHHHHHHHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC-
Q 024143 154 RSL---D--------YPGDVRLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (272)
Q Consensus 154 ~~~---~--------~~~~~~~l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~- 221 (272)
+.. + |+-....+ ++..|+++|+.+||.+.- |.++..|-+.|-+.|+-+.+..
T Consensus 95 RgkaGadgfykvDhDyvl~~A~~-AKe~Gck~fvLvSS~GAd---------------~sSrFlY~k~KGEvE~~v~eL~F 158 (238)
T KOG4039|consen 95 RGKAGADGFYKVDHDYVLQLAQA-AKEKGCKTFVLVSSAGAD---------------PSSRFLYMKMKGEVERDVIELDF 158 (238)
T ss_pred ccccccCceEeechHHHHHHHHH-HHhCCCeEEEEEeccCCC---------------cccceeeeeccchhhhhhhhccc
Confidence 421 1 22111222 356789999999997741 2223567789999999998876
Q ss_pred --eeEEeeCceecCCC
Q 024143 222 --GCVLRLAGLYKADR 235 (272)
Q Consensus 222 --~~IlRp~~iyG~~~ 235 (272)
++|+|||-+.|...
T Consensus 159 ~~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 159 KHIIILRPGPLLGERT 174 (238)
T ss_pred cEEEEecCcceecccc
Confidence 89999999998753
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.1e-08 Score=84.93 Aligned_cols=171 Identities=13% Similarity=0.050 Sum_probs=109.1
Q ss_pred eEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--CCceeeccC-------ccccCCCCEEEEecCCCCC
Q 024143 86 DLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKW-------TEATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 86 ~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--~~i~~~~~d-------~~~~~~~D~Vi~~a~~~~~ 155 (272)
++++.| -||.|+++++..... ++.|..+.|+..+. .+.. ..+.+..++ .+.+.++..|+-|++....
T Consensus 54 ~tlvlggnpfsgs~vlk~A~~v--v~svgilsen~~k~-~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn 130 (283)
T KOG4288|consen 54 WTLVLGGNPFSGSEVLKNATNV--VHSVGILSENENKQ-TLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGN 130 (283)
T ss_pred HHhhhcCCCcchHHHHHHHHhh--ceeeeEeecccCcc-hhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccc
Confidence 566665 599999999999999 99999999986532 1111 112222222 1356678888888876543
Q ss_pred CChHHHH-----HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-C--eeEE
Q 024143 156 LDYPGDV-----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-G--GCVL 225 (272)
Q Consensus 156 ~~~~~~~-----~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-~--~~Il 225 (272)
..+.+.+ .+.. +++.|+++|+|+|... ||-. |+.| ..|-..|.++|..+... + .+|+
T Consensus 131 ~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~~---------~~i~---rGY~~gKR~AE~Ell~~~~~rgiil 197 (283)
T KOG4288|consen 131 IILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGLP---------PLIP---RGYIEGKREAEAELLKKFRFRGIIL 197 (283)
T ss_pred hHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCCC---------Cccc---hhhhccchHHHHHHHHhcCCCceee
Confidence 3222222 1111 3567999999999643 2211 2334 46778899999887664 3 8999
Q ss_pred eeCceecCCCc-----HH------HHHHHcCc------ccCCCCcccccccHHHHHHHHHHHhC
Q 024143 226 RLAGLYKADRG-----AH------VYWLQKGT------VDSRPDHILNLIHYEVNTLVLFIAST 272 (272)
Q Consensus 226 Rp~~iyG~~~~-----~~------~~~l~~g~------~~~~~~~~~~~I~v~Dva~ai~~a~~ 272 (272)
|||.+||...- ++ .++..+.- +..-+.-....|.+++||.+.+.|++
T Consensus 198 RPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~ 261 (283)
T KOG4288|consen 198 RPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIE 261 (283)
T ss_pred ccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhcc
Confidence 99999997421 11 11222221 22345667788999999999988763
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.2e-07 Score=82.62 Aligned_cols=135 Identities=13% Similarity=0.084 Sum_probs=84.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc--hhhhhhCC--ceeeccCc---c-----------ccCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMG--ITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~--~~~l~~~~--i~~~~~d~---~-----------~~~~~D 144 (272)
.++++|||+ |.||+.++++|.++ |++|+++.|+... ...+...+ +..+..|. + ....+|
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKA--GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999997 99999999999999 9999998886422 11222222 33333442 1 134789
Q ss_pred EEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
++||+|+...... +.+.+ +.++ ....+ ..++|++||...|.... ..
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~- 153 (251)
T PRK12481 86 ILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI-----------RV- 153 (251)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC-----------CC-
Confidence 9999998533211 11110 1111 11223 46899999987654211 11
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
..|+.+|...+.+.+.. + +..++||.+-.+
T Consensus 154 -~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~ 192 (251)
T PRK12481 154 -PSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATD 192 (251)
T ss_pred -cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccC
Confidence 46899999988776643 3 577899988544
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1e-07 Score=83.40 Aligned_cols=135 Identities=10% Similarity=0.018 Sum_probs=85.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC----CceeeccCc---c-----------cc
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM----GITPSLKWT---E-----------AT 140 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~----~i~~~~~d~---~-----------~~ 140 (272)
.++++|||+ |.||++++++|.++ |++|++++|++++.+... .. .+..+..|. + ..
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEA--GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 468999997 99999999999999 999999999876544321 11 222333332 1 13
Q ss_pred CCCCEEEEecCCCCCC--------ChHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSL--------DYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~--------~~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
..+|++||+|+..... ++.+.+ +.++ ....+..++|++||...+...
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 153 (265)
T PRK07062 86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE------------ 153 (265)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC------------
Confidence 4689999999853211 121111 1111 123346799999997654321
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
|. ...|+.+|...+.+.+.. + +..++|+.+.-+
T Consensus 154 ~~-~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 195 (265)
T PRK07062 154 PH-MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESG 195 (265)
T ss_pred CC-chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccc
Confidence 11 146888888776655432 3 677899988654
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.7e-07 Score=81.85 Aligned_cols=138 Identities=13% Similarity=0.065 Sum_probs=83.6
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-chh----hhhhCC--ceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHD----ELINMG--ITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-~~~----~l~~~~--i~~~~~d~---~-----------~ 139 (272)
+..++++|||+ |.||+++++.|.++ |++|+.+.|+.. ... .+...+ +..+..|. + .
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~--G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 82 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKE--KAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE 82 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 34578999996 99999999999999 999998888532 222 122222 22233332 1 1
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
...+|++||+++...... +.+.+ +.++ ....+ .+++|++||...+. +
T Consensus 83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~-----------~ 151 (261)
T PRK08936 83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI-----------P 151 (261)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC-----------C
Confidence 246899999998643211 11111 1111 11223 46899999964321 1
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
..+. ..|+.+|.+.+.+.+.. + +..++|+.+..+.
T Consensus 152 ~~~~--~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 195 (261)
T PRK08936 152 WPLF--VHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_pred CCCC--cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCc
Confidence 1122 57999997777655442 3 6789999987664
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.9e-07 Score=81.79 Aligned_cols=169 Identities=13% Similarity=-0.003 Sum_probs=101.4
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCc--eeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGI--TPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i--~~~~~d~---~-----------~ 139 (272)
..+++++|||| +-||..++++|.++ |++|+.+.|+.+++..+.. .++ +....|. + .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~--g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARR--GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 45679999998 99999999999999 9999999999998766542 123 3333442 1 1
Q ss_pred cCCCCEEEEecCCCCCCCh-----HH--HHH--HH----------H--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLDY-----PG--DVR--LA----------A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~~-----~~--~~~--~l----------~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
...+|++|++|+....+.+ .+ .+- |+ + ..+.+-.++|.++|..-|-..
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~----------- 150 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT----------- 150 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC-----------
Confidence 2379999999997654321 11 110 11 0 124567799999998855321
Q ss_pred CCCCCChHHHHHHHHH----HH---HHHcC--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAE----KV---ILEFG--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE----~~---l~~~~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
|. .+.|+.+|...- -+ +...| ++.+-||-+.-+... .++..........-+...+|+|+..+.
T Consensus 151 -p~-~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~------~~~~~~~~~~~~~~~~~~~~va~~~~~ 222 (265)
T COG0300 151 -PY-MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD------AKGSDVYLLSPGELVLSPEDVAEAALK 222 (265)
T ss_pred -cc-hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc------ccccccccccchhhccCHHHHHHHHHH
Confidence 21 157999987542 22 22334 677888766532210 011111111112335666777777665
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
++
T Consensus 223 ~l 224 (265)
T COG0300 223 AL 224 (265)
T ss_pred HH
Confidence 54
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.7e-08 Score=84.71 Aligned_cols=171 Identities=12% Similarity=-0.068 Sum_probs=96.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-cchhhhhh---CCceeeccCc---c----c-------cC--C
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELIN---MGITPSLKWT---E----A-------TQ--K 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~~~l~~---~~i~~~~~d~---~----~-------~~--~ 142 (272)
|++++|||+ |.||+.++++|.++ |++|++++|++ +....+.. ..++.+..|. + . .. +
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEK--GTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN 78 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhc--CCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence 578999996 99999999999999 99999999976 33333322 1344444442 1 1 11 1
Q ss_pred C--CEEEEecCCCCC----CC-----hHHH-----------HHHHHH--Hh-cCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 143 F--PYVIFCAPPSRS----LD-----YPGD-----------VRLAAL--SW-NGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 143 ~--D~Vi~~a~~~~~----~~-----~~~~-----------~~~l~~--~~-~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
. +++||+++.... .+ +.+. ++.++. .. .+.+++|++||...+..
T Consensus 79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------- 147 (251)
T PRK06924 79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP----------- 147 (251)
T ss_pred CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC-----------
Confidence 2 278898875321 11 1111 111111 12 23568999999764321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc---------C--eeEEeeCceecCCCcHHHHHHHcCcc------cCCCCcccccccH
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF---------G--GCVLRLAGLYKADRGAHVYWLQKGTV------DSRPDHILNLIHY 260 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~---------~--~~IlRp~~iyG~~~~~~~~~l~~g~~------~~~~~~~~~~I~v 260 (272)
..+. ..|+.+|...|.+++.+ + +..++|+.+-.+..... +...... .........+...
T Consensus 148 ~~~~--~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (251)
T PRK06924 148 YFGW--SAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQI--RSSSKEDFTNLDRFITLKEEGKLLSP 223 (251)
T ss_pred CCCc--HHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHH--HhcCcccchHHHHHHHHhhcCCcCCH
Confidence 1122 68999999999887533 2 46678887754321100 0000000 0000001125788
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|+.++.++
T Consensus 224 ~dva~~~~~l~ 234 (251)
T PRK06924 224 EYVAKALRNLL 234 (251)
T ss_pred HHHHHHHHHHH
Confidence 99999987665
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.5e-07 Score=82.60 Aligned_cols=136 Identities=13% Similarity=0.121 Sum_probs=86.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-------CCceeeccCc---c----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPSLKWT---E----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-------~~i~~~~~d~---~----------~~~ 141 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + ...
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARA--GADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence 3468999997 99999999999999 9999999998765443221 1233444442 1 123
Q ss_pred CCCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.+|++||+++..... + +.+.+ +.++ +...+.+++|++||...+... |
T Consensus 85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~------------~ 152 (263)
T PRK08339 85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPI------------P 152 (263)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCC------------C
Confidence 689999999853211 1 21111 1111 123456799999998754211 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
. ...|+.+|...+.+.+.. + +..+.||.+..+
T Consensus 153 ~-~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (263)
T PRK08339 153 N-IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTD 193 (263)
T ss_pred c-chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccH
Confidence 1 146888998888766543 2 567889888543
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.7e-07 Score=81.57 Aligned_cols=136 Identities=13% Similarity=0.092 Sum_probs=84.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc--hhhhhhCC--ceeeccCc---c-----------ccCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMG--ITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~--~~~l~~~~--i~~~~~d~---~-----------~~~~~ 143 (272)
..++++|||+ |.||++++++|.++ |++|+++++.... .+.+...+ +..+..|. + ....+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEA--GCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 3468999996 99999999999999 9999988775321 22232222 33333342 1 13478
Q ss_pred CEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
|++||+|+..... + +.+.+ +.+. ....+ ..++|++||...|.... .
T Consensus 87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~- 154 (253)
T PRK08993 87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI-----------R- 154 (253)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC-----------C-
Confidence 9999999864211 1 11111 1111 11222 36899999987664321 0
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
...|+.+|...|.+.+.. + +..++||.+--+
T Consensus 155 -~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~ 194 (253)
T PRK08993 155 -VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATN 194 (253)
T ss_pred -CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCc
Confidence 147899999988776643 2 577899998654
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.6e-07 Score=82.15 Aligned_cols=135 Identities=16% Similarity=0.062 Sum_probs=86.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---CceeeccCc---c-----------ccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~i~~~~~d~---~-----------~~~~~D~ 145 (272)
.++++|||+ |.||++++++|.++ |++|++++|++++.+.+... .+..+..|. + ....+|+
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAE--GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 468999996 99999999999999 99999999987766554321 233344442 1 1347899
Q ss_pred EEEecCCCCC----CC-----hHHHHH---------------HHHH-HhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRS----LD-----YPGDVR---------------LAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 146 Vi~~a~~~~~----~~-----~~~~~~---------------~l~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
+||+++.... .+ ..+..+ .++. ......++|++||...|.... +
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~ 152 (263)
T PRK06200 84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG-----------G 152 (263)
T ss_pred EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC-----------C
Confidence 9999985321 01 000011 1110 011236899999987653211 1
Q ss_pred CCCChHHHHHHHHHHHHHHcC--------eeEEeeCceecC
Q 024143 201 IGRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYKA 233 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~~--------~~IlRp~~iyG~ 233 (272)
. ..|+.+|...|.+.+... +..+.||.+.-+
T Consensus 153 ~--~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~ 191 (263)
T PRK06200 153 G--PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTD 191 (263)
T ss_pred C--chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccC
Confidence 1 479999999998877542 466788888544
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.79 E-value=2e-07 Score=81.52 Aligned_cols=135 Identities=18% Similarity=0.109 Sum_probs=84.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---CceeeccCc---c-----------ccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~i~~~~~d~---~-----------~~~~~D~ 145 (272)
.++++|||+ |.||++++++|.++ |++|++++|+.++.+.+... .+..+..|. + ....+|+
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAE--GARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 478999996 99999999999999 99999999987665554332 133333332 1 1357899
Q ss_pred EEEecCCCCC-------C------ChHHHH-----------HHHHHH-hcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRS-------L------DYPGDV-----------RLAALS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 146 Vi~~a~~~~~-------~------~~~~~~-----------~~l~~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
+||+|+.... . ++.+.+ +.++.. .....++|++||...+... ..
T Consensus 83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~ 151 (262)
T TIGR03325 83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN-----------GG 151 (262)
T ss_pred EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCC-----------CC
Confidence 9999974210 0 011111 111100 1122578888886543211 01
Q ss_pred CCCChHHHHHHHHHHHHHHc----C----eeEEeeCceecC
Q 024143 201 IGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYKA 233 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~----~----~~IlRp~~iyG~ 233 (272)
...|+.+|...|.+.+.+ + +..+.||.+..+
T Consensus 152 --~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~ 190 (262)
T TIGR03325 152 --GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSD 190 (262)
T ss_pred --CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCC
Confidence 147999999999887654 2 456789988654
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.78 E-value=5e-07 Score=86.85 Aligned_cols=168 Identities=13% Similarity=0.027 Sum_probs=102.0
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CC--ceeeccCc---c-----------ccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MG--ITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~--i~~~~~d~---~-----------~~~~~D 144 (272)
..++++|||+ |.||++++++|.++ |++|+++.|++++.+.+.. .+ ...+..|. + ....+|
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAA--GDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3468999996 99999999999999 9999999998766554432 11 22233332 1 134689
Q ss_pred EEEEecCCCCC-C---C-----hHHHH-----------HHHHHHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRS-L---D-----YPGDV-----------RLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 145 ~Vi~~a~~~~~-~---~-----~~~~~-----------~~l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
++||+|+.... . + +.+.+ +.++....+..++|++||...+... .+. .
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~ 412 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL-----------PPR--N 412 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC-----------CCC--c
Confidence 99999986421 1 1 11111 0111111234689999997654221 112 5
Q ss_pred hHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH-------HHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH-------VYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~-------~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
.|+.+|+..+.+.+.. + +..+.|+.+..+..... ...+.+..+ ...+...+|+|++++
T Consensus 413 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dia~~~~ 486 (520)
T PRK06484 413 AYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIP------LGRLGDPEEVAEAIA 486 (520)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCC------CCCCcCHHHHHHHHH
Confidence 7999999999777653 2 57889999876532110 001111111 112467899998877
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 487 ~l~ 489 (520)
T PRK06484 487 FLA 489 (520)
T ss_pred HHh
Confidence 654
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=4e-07 Score=80.33 Aligned_cols=167 Identities=17% Similarity=0.079 Sum_probs=93.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch-------hh----hhhC--CceeeccCc---c--------
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-------DE----LINM--GITPSLKWT---E-------- 138 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~-------~~----l~~~--~i~~~~~d~---~-------- 138 (272)
.++++|||+ |+||+++++.|.++ |++|++++|+.+.. .. +... .+..+..|. +
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 6 GKTLFITGASRGIGLAIALRAARD--GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 368999997 99999999999999 99999999975431 11 1111 233333442 1
Q ss_pred ---ccCCCCEEEEecCCCCCC---C-----hHHHHH-------HHH------HHhcCCCeEEEEecceeecCCCCCCCCC
Q 024143 139 ---ATQKFPYVIFCAPPSRSL---D-----YPGDVR-------LAA------LSWNGEGSFLFTSSSAIYDCSDNGACDE 194 (272)
Q Consensus 139 ---~~~~~D~Vi~~a~~~~~~---~-----~~~~~~-------~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E 194 (272)
....+|+|||+++..... + +.+.++ .++ ....+-.++|++||..... ..
T Consensus 84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---~~---- 156 (273)
T PRK08278 84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD---PK---- 156 (273)
T ss_pred HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc---cc----
Confidence 124789999999863211 1 111110 111 1123346888888743110 00
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHH
Q 024143 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 195 ~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
...+. +.|+.+|...|.+++.+ + ...+.|+.+.. ......+..+. .....+...+|+|+
T Consensus 157 --~~~~~--~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~---t~~~~~~~~~~-----~~~~~~~~p~~va~ 224 (273)
T PRK08278 157 --WFAPH--TAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIA---TAAVRNLLGGD-----EAMRRSRTPEIMAD 224 (273)
T ss_pred --ccCCc--chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccc---cHHHHhccccc-----ccccccCCHHHHHH
Confidence 00122 68999999999988754 2 46678874321 11111111111 11123456788887
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
.++..+
T Consensus 225 ~~~~l~ 230 (273)
T PRK08278 225 AAYEIL 230 (273)
T ss_pred HHHHHh
Confidence 776643
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.5e-07 Score=79.45 Aligned_cols=169 Identities=12% Similarity=0.023 Sum_probs=101.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-C---ceeeccC---c-----------cccCCCCE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-G---ITPSLKW---T-----------EATQKFPY 145 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~---i~~~~~d---~-----------~~~~~~D~ 145 (272)
|.++|||| .-||..++++|.++ |++|+...|+.++++.+... + +.+...| . +...++|+
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~--G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 7 KVALITGASSGIGEATARALAEA--GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHC--CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 56899997 88999999999999 99999999999988877542 2 2232233 2 13457999
Q ss_pred EEEecCCCCCCC--------hH-------HHH----HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRSLD--------YP-------GDV----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 146 Vi~~a~~~~~~~--------~~-------~~~----~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
+||+|+....++ |. .++ +.++ +.+.+-.++|.+||+.- . .+ .|. .+
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG--~---~~-------y~~-~~ 151 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAG--R---YP-------YPG-GA 151 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccc--c---cc-------CCC-Cc
Confidence 999999644321 11 111 1111 13445569999999861 1 00 111 25
Q ss_pred hHHHHHHHHHHHHHHc----C-----eeEEeeCceecCCCcHHHHHHHcCc--ccCCCCcccccccHHHHHHHHHHHh
Q 024143 205 PRTDVLLKAEKVILEF----G-----GCVLRLAGLYKADRGAHVYWLQKGT--VDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~----~-----~~IlRp~~iyG~~~~~~~~~l~~g~--~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.|+.+|+..-..-... . ++.+-||.+-........ .+|. ....-.....++.-+|+|+++..++
T Consensus 152 vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~---~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~ 226 (246)
T COG4221 152 VYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVR---FEGDDERADKVYKGGTALTPEDIAEAVLFAA 226 (246)
T ss_pred cchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceeccccc---CCchhhhHHHHhccCCCCCHHHHHHHHHHHH
Confidence 7999998876654432 1 455566555322111000 0010 0000012345788999999998775
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.3e-07 Score=80.09 Aligned_cols=168 Identities=14% Similarity=0.060 Sum_probs=94.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC-Ccchhh----hhh---CCceeeccCc---c-----------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDE----LIN---MGITPSLKWT---E-----------A 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~-~~~~~~----l~~---~~i~~~~~d~---~-----------~ 139 (272)
..++++|||+ +.||++++++|.++ |++|+.+.|+ +++.+. +.. ..+..+..|. + .
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQS--GVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 3478999997 99999999999999 9999887653 333322 111 1233333442 1 1
Q ss_pred cCCCCEEEEecCCCC------CCCh----HHHHH---------------HHH--HHhcCCCeEEEEecceeecCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSR------SLDY----PGDVR---------------LAA--LSWNGEGSFLFTSSSAIYDCSDNGAC 192 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~------~~~~----~~~~~---------------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~ 192 (272)
...+|++||+|+... ...+ .+.+. .++ +...+.+++|++||...+-..
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 159 (260)
T PRK08416 85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI----- 159 (260)
T ss_pred cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC-----
Confidence 346899999997421 0100 01111 111 112345699999996532110
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCccccc
Q 024143 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNL 257 (272)
Q Consensus 193 ~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~ 257 (272)
| ....|+.+|...|.+.+.+ + +..+.||.+--+-... ....+.... + ..-+
T Consensus 160 -------~-~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~----~--~~r~ 225 (260)
T PRK08416 160 -------E-NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELS----P--LNRM 225 (260)
T ss_pred -------C-CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcC----C--CCCC
Confidence 1 1147899999998877653 2 5678898774331100 000111111 1 1125
Q ss_pred ccHHHHHHHHHHHh
Q 024143 258 IHYEVNTLVLFIAS 271 (272)
Q Consensus 258 I~v~Dva~ai~~a~ 271 (272)
...+|+|.+++..+
T Consensus 226 ~~p~~va~~~~~l~ 239 (260)
T PRK08416 226 GQPEDLAGACLFLC 239 (260)
T ss_pred CCHHHHHHHHHHHc
Confidence 67899998877654
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=7.3e-07 Score=76.39 Aligned_cols=129 Identities=14% Similarity=0.173 Sum_probs=81.8
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc---c----c----cCCCCEEEEecC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E----A----TQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~---~----~----~~~~D~Vi~~a~ 151 (272)
||++|||+ |.||+++++.|.++ |++|+.+.|++++...+.. .++..+.+|. + . ...+|++||+++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND--GHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 37999997 99999999999999 9999999998776554422 2344444443 1 1 136899999987
Q ss_pred CCC----C---------CChHHHHH-HH----------HHHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 152 PSR----S---------LDYPGDVR-LA----------ALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 152 ~~~----~---------~~~~~~~~-~l----------~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
... . +++.+.+. ++ +.......++|++||.. . + . ...|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~---------~--~--~~~Y~ 141 (223)
T PRK05884 79 PSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----P---------P--A--GSAEA 141 (223)
T ss_pred ccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----C---------C--C--ccccH
Confidence 411 0 01111111 11 00111236899999854 0 0 1 15799
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCceec
Q 024143 208 DVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (272)
Q Consensus 208 ~sk~~aE~~l~~~-------~--~~IlRp~~iyG 232 (272)
.+|+..+.+.+.. + ...+.||.+..
T Consensus 142 asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t 175 (223)
T PRK05884 142 AIKAALSNWTAGQAAVFGTRGITINAVACGRSVQ 175 (223)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCc
Confidence 9999988777643 2 56788988753
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.1e-06 Score=79.31 Aligned_cols=67 Identities=12% Similarity=0.074 Sum_probs=48.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhh----C--CceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN----M--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~----~--~i~~~~~d~---~-----------~~~ 141 (272)
.++++|||+ +-||.+++++|.++ | ++|+.+.|+.++...+.. . .+..+..|. + ...
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~--G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAAT--GEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 357999997 99999999999999 9 999999998765443321 1 123333442 1 124
Q ss_pred CCCEEEEecCC
Q 024143 142 KFPYVIFCAPP 152 (272)
Q Consensus 142 ~~D~Vi~~a~~ 152 (272)
++|++||+|+.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 69999999985
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.9e-06 Score=72.51 Aligned_cols=135 Identities=16% Similarity=0.114 Sum_probs=84.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h---CCceeeccCc---c-------ccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N---MGITPSLKWT---E-------ATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~---~~i~~~~~d~---~-------~~~~~D~ 145 (272)
.++++|+|+ |.||+.+++.|.++ |++|++++|++++...+. . ..+.....|. + ....+|+
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 84 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAAE--GCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI 84 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence 478999997 99999999999999 999999999876554322 1 1233333442 1 2457999
Q ss_pred EEEecCCCCCC---C-----hHHHH----H-------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRSL---D-----YPGDV----R-------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 146 Vi~~a~~~~~~---~-----~~~~~----~-------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
+||+++..... + +...+ . .+. +...+.+++|++||..-.. +... ..
T Consensus 85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~--~~ 151 (259)
T PRK06125 85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN-----------PDAD--YI 151 (259)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC-----------CCCC--ch
Confidence 99999853211 1 11111 0 111 1223346899998864211 1111 24
Q ss_pred hHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
.|+.+|...+.+.+.. + +..+.||.+..+
T Consensus 152 ~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 189 (259)
T PRK06125 152 CGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD 189 (259)
T ss_pred HhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence 6888998887776643 2 577899887654
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.58 E-value=5.2e-06 Score=71.28 Aligned_cols=163 Identities=9% Similarity=-0.030 Sum_probs=93.3
Q ss_pred EEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-cchhh----hhhCC--ceeeccCc---c-----------ccCCCC
Q 024143 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE----LINMG--ITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 87 IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~~~----l~~~~--i~~~~~d~---~-----------~~~~~D 144 (272)
|+|||+ |+||.++++.|.++ |++|+++.|.. ++.+. +...+ +..+..|. + .....|
T Consensus 1 vlItGas~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAAD--GFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY 78 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 589996 99999999999999 99999988753 22222 22222 33444442 1 134679
Q ss_pred EEEEecCCCCCC--------ChHHHH-----------HHHH---HHhcCCCeEEEEeccee-ecCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSL--------DYPGDV-----------RLAA---LSWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 145 ~Vi~~a~~~~~~--------~~~~~~-----------~~l~---~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~p~~p~ 201 (272)
.+||+++..... ++...+ +.++ ....+.+++|++||... |+.. ..
T Consensus 79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~ 146 (239)
T TIGR01831 79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR------------GQ 146 (239)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC------------CC
Confidence 999999853211 111111 1111 01234578999999653 3321 11
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHH---HHcCcccCCCCcccccccHHHHHHHHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYW---LQKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~---l~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
..|+.+|...+.+.+.. + .+.++|+.+..+........ ..+..+ ..-+...+|++++++.
T Consensus 147 --~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~~~~ 218 (239)
T TIGR01831 147 --VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVP------MNRMGQPAEVASLAGF 218 (239)
T ss_pred --cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCC------CCCCCCHHHHHHHHHH
Confidence 46888998777655442 3 57789999876643221111 111111 1123456888888776
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
.+
T Consensus 219 l~ 220 (239)
T TIGR01831 219 LM 220 (239)
T ss_pred Hc
Confidence 54
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.58 E-value=5.5e-06 Score=77.41 Aligned_cols=70 Identities=17% Similarity=0.220 Sum_probs=50.8
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-hC--CceeeccCc-------cccCCCCEEEEec
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NM--GITPSLKWT-------EATQKFPYVIFCA 150 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-~~--~i~~~~~d~-------~~~~~~D~Vi~~a 150 (272)
..+++++|||+ |.||++++++|.++ |++|++++|++++..... .. .+..+.+|. +.+.++|++||+|
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~--G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA 253 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQ--GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINH 253 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence 45678999997 99999999999999 999999999866543221 11 222333332 2356899999999
Q ss_pred CCC
Q 024143 151 PPS 153 (272)
Q Consensus 151 ~~~ 153 (272)
+..
T Consensus 254 Gi~ 256 (406)
T PRK07424 254 GIN 256 (406)
T ss_pred CcC
Confidence 864
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.57 E-value=1e-06 Score=79.92 Aligned_cols=136 Identities=13% Similarity=0.045 Sum_probs=84.9
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C--C--ceeeccCc-----c-------ccC--
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--G--ITPSLKWT-----E-------ATQ-- 141 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~--~--i~~~~~d~-----~-------~~~-- 141 (272)
+.++|||+ |.||++++++|.++ |++|+.++|++++.+.+.. . + +..+..|. + .+.
T Consensus 54 ~~~lITGAs~GIG~alA~~La~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 54 SWALVTGPTDGIGKGFAFQLARK--GLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 68999997 99999999999999 9999999999876554321 1 1 22222221 1 123
Q ss_pred CCCEEEEecCCCCC-----CC-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS-----LD-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~-----~~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
++|++||+|+.... .+ +.+.+ +.++ +...+.+++|++||...+... .
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~----------~ 201 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP----------S 201 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC----------C
Confidence 45699999985321 11 11111 0111 123456799999997654210 0
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
.|. .+.|+.+|...+.+.+.. + +..+.||.+-.+
T Consensus 202 ~p~-~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~ 244 (320)
T PLN02780 202 DPL-YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATK 244 (320)
T ss_pred Ccc-chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence 111 268999999988766543 3 577899987543
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=2e-06 Score=76.03 Aligned_cols=146 Identities=11% Similarity=0.073 Sum_probs=81.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC--ceeeccCc---c----------ccCCCCE
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E----------ATQKFPY 145 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~--i~~~~~d~---~----------~~~~~D~ 145 (272)
+.++|||+|.||++++++|. + |++|++++|++++.+.+ ...+ +..+..|. + ....+|+
T Consensus 3 k~~lItGa~gIG~~la~~l~-~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-A--GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-C--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 46788999999999999995 7 99999999986654332 2222 33333442 1 1246899
Q ss_pred EEEecCCCCCC-ChHHHHH-------HHH----HHhcCCCeEEEEecceeecCCC-----C---CCCCCCC----CC-CC
Q 024143 146 VIFCAPPSRSL-DYPGDVR-------LAA----LSWNGEGSFLFTSSSAIYDCSD-----N---GACDEDS----PV-VP 200 (272)
Q Consensus 146 Vi~~a~~~~~~-~~~~~~~-------~l~----~~~~gvkr~V~~SS~~vYg~~~-----~---~~~~E~~----p~-~p 200 (272)
|||+|+..... ++.+.+. .++ ......+++|++||........ . ..++.++ +. .+
T Consensus 80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (275)
T PRK06940 80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQP 159 (275)
T ss_pred EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccccccc
Confidence 99999864321 2211111 111 0101124567777765421100 0 0011111 00 01
Q ss_pred ----CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 201 ----IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 201 ----~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
.....|+.+|+..+.+.+.. + +..+.||.+..+
T Consensus 160 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~ 205 (275)
T PRK06940 160 DAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTP 205 (275)
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCc
Confidence 11257999999988776543 2 577899988765
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=8e-06 Score=71.24 Aligned_cols=168 Identities=11% Similarity=0.034 Sum_probs=94.6
Q ss_pred CCCeEEEEcC-c--HHHHHHHHHHHhcCCCCeEEEEecCC-----------cch----hhhhhCC--ceeeccCc---c-
Q 024143 83 GENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTA-----------DHH----DELINMG--ITPSLKWT---E- 138 (272)
Q Consensus 83 ~~~~IlItGa-G--fiG~~l~~~L~~~~~g~~V~~~~R~~-----------~~~----~~l~~~~--i~~~~~d~---~- 138 (272)
..++++|||+ | .||++++++|.++ |++|+...|.. ++. ..+...+ +..+..|. +
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~--G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEA--GADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 3478999997 4 6999999999999 99998875321 111 1122222 23333442 1
Q ss_pred ----------ccCCCCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCC
Q 024143 139 ----------ATQKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCS 187 (272)
Q Consensus 139 ----------~~~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~ 187 (272)
....+|+|||+++..... + +.+.+ +.++ ....+.+++|++||...+.
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-- 160 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG-- 160 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC--
Confidence 134589999999853221 1 11111 0111 1223356999999976432
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-HHHHHHcCcccCCCCccccc
Q 024143 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-HVYWLQKGTVDSRPDHILNL 257 (272)
Q Consensus 188 ~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-~~~~l~~g~~~~~~~~~~~~ 257 (272)
+..+ ...|+.+|...+.+.+.. + .+.++|+.+-.+.... ....+....+ ...+
T Consensus 161 ---------~~~~--~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~------~~~~ 223 (256)
T PRK12859 161 ---------PMVG--ELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFP------FGRI 223 (256)
T ss_pred ---------CCCC--chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCC------CCCC
Confidence 1111 268999999998776553 2 5778999886543221 1111111111 1113
Q ss_pred ccHHHHHHHHHHHh
Q 024143 258 IHYEVNTLVLFIAS 271 (272)
Q Consensus 258 I~v~Dva~ai~~a~ 271 (272)
...+|++++++..+
T Consensus 224 ~~~~d~a~~~~~l~ 237 (256)
T PRK12859 224 GEPKDAARLIKFLA 237 (256)
T ss_pred cCHHHHHHHHHHHh
Confidence 45688888876543
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.7e-06 Score=73.80 Aligned_cols=189 Identities=16% Similarity=0.083 Sum_probs=112.6
Q ss_pred CCcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCcee--eccCc----c--ccCCCCEEEEec
Q 024143 80 GGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP--SLKWT----E--ATQKFPYVIFCA 150 (272)
Q Consensus 80 ~~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~--~~~d~----~--~~~~~D~Vi~~a 150 (272)
+....+||||||+ |.+|..+++.|+.++....|+..+.-+.. +.....|--. .+.|- + .-+.+|.+||..
T Consensus 40 ~~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfS 118 (366)
T KOG2774|consen 40 QTQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVTDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFS 118 (366)
T ss_pred ccCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhcccCCchhhhhhccccHHHhhcccccceeeeHH
Confidence 3345679999998 99999999999988644455544332111 1111112111 11121 1 224789999986
Q ss_pred CCCC-CC---------ChHHHHHHHHHH-hcCCCeEEEEecceeecCCCC-CCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 024143 151 PPSR-SL---------DYPGDVRLAALS-WNGEGSFLFTSSSAIYDCSDN-GACDEDSPVVPIGRSPRTDVLLKAEKVIL 218 (272)
Q Consensus 151 ~~~~-~~---------~~~~~~~~l~~~-~~gvkr~V~~SS~~vYg~~~~-~~~~E~~p~~p~~~~~y~~sk~~aE~~l~ 218 (272)
+... .+ -..+++.+++.- +.-.-++..-|+++.||.... .|-+.-+--.|. +.||.+|..+|-+=.
T Consensus 119 ALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPR--TIYGVSKVHAEL~GE 196 (366)
T KOG2774|consen 119 ALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPR--TIYGVSKVHAELLGE 196 (366)
T ss_pred HHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCc--eeechhHHHHHHHHH
Confidence 5311 11 135666776632 222345666788999987432 233333323344 889999998886544
Q ss_pred H----cC--eeEEeeCceecC---CCc--H-----HHHHHHcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 219 E----FG--GCVLRLAGLYKA---DRG--A-----HVYWLQKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 219 ~----~~--~~IlRp~~iyG~---~~~--~-----~~~~l~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
. ++ .-.+|.+.+... |.+ . +...+.+|+- .-+++....+.|..|+-++++..|
T Consensus 197 y~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~ 267 (366)
T KOG2774|consen 197 YFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLL 267 (366)
T ss_pred HHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHH
Confidence 3 33 578888887753 221 1 2224667764 457899999999999988877654
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.1e-06 Score=74.25 Aligned_cols=167 Identities=11% Similarity=-0.058 Sum_probs=92.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC-Ccchhhh----hhC---CceeeccC---cc--------------
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDEL----INM---GITPSLKW---TE-------------- 138 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~-~~~~~~l----~~~---~i~~~~~d---~~-------------- 138 (272)
+.++|||+ |.||++++++|.++ |++|+++.|. +++...+ ... .+..+.+| .+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~ 79 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQE--GYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACF 79 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhC--CCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence 57999997 99999999999999 9999988654 3333222 111 12222333 21
Q ss_pred -ccCCCCEEEEecCCCCCC-----C--------------hHHHHH-H------H----H--HHhc------CCCeEEEEe
Q 024143 139 -ATQKFPYVIFCAPPSRSL-----D--------------YPGDVR-L------A----A--LSWN------GEGSFLFTS 179 (272)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~-----~--------------~~~~~~-~------l----~--~~~~------gvkr~V~~S 179 (272)
...++|+|||+|+..... + +.+.+. + + . +... +..++|++|
T Consensus 80 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~ 159 (267)
T TIGR02685 80 RAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC 159 (267)
T ss_pred HccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence 124699999999852210 0 101111 0 0 0 0011 123577776
Q ss_pred cceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH--HHHHHcCccc
Q 024143 180 SSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH--VYWLQKGTVD 248 (272)
Q Consensus 180 S~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~--~~~l~~g~~~ 248 (272)
|..... +..+. ..|+.+|...|.+.+.. + +..++|+.+..+..... ........+.
T Consensus 160 s~~~~~-----------~~~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~ 226 (267)
T TIGR02685 160 DAMTDQ-----------PLLGF--TMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKVPL 226 (267)
T ss_pred hhhccC-----------CCccc--chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhCCC
Confidence 654211 11122 58999999999887653 3 68899999865532111 1111111111
Q ss_pred CCCCcccccccHHHHHHHHHHHh
Q 024143 249 SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 249 ~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
. ..+...+|++++++.++
T Consensus 227 ~-----~~~~~~~~va~~~~~l~ 244 (267)
T TIGR02685 227 G-----QREASAEQIADVVIFLV 244 (267)
T ss_pred C-----cCCCCHHHHHHHHHHHh
Confidence 0 12457789988877654
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=5e-06 Score=71.25 Aligned_cols=165 Identities=12% Similarity=0.073 Sum_probs=92.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-------ccCCCCEEEEecCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-------ATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-------~~~~~D~Vi~~a~~~ 153 (272)
|+++|||+ |.||++++++|.++..++.|....|+.... .....+..+..|. + .+.++|+|||+++..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~ 78 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGML 78 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccc
Confidence 48999996 999999999999983346666666654322 1112333444442 1 246799999999864
Q ss_pred CC------C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 154 RS------L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 154 ~~------~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
.. . + +...+ +.++ ....+.++++++||.. +.. .+. +..+. ..|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~-----~~~-~~~~~--~~Y 148 (235)
T PRK09009 79 HTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSI-----SDN-RLGGW--YSY 148 (235)
T ss_pred cccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--ccc-----ccC-CCCCc--chh
Confidence 21 0 0 11111 0111 1123346899998732 211 111 11122 579
Q ss_pred HHHHHHHHHHHHHc---------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 207 TDVLLKAEKVILEF---------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 207 ~~sk~~aE~~l~~~---------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|...+.+.+.. + ...+.||.+..+-.... ....+ ...++..+|+|+.++..+
T Consensus 149 ~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~------~~~~~~~~~~a~~~~~l~ 214 (235)
T PRK09009 149 RASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF----QQNVP------KGKLFTPEYVAQCLLGII 214 (235)
T ss_pred hhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch----hhccc------cCCCCCHHHHHHHHHHHH
Confidence 99999998876643 2 45678888765532211 11111 122467788888877654
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.7e-05 Score=69.03 Aligned_cols=168 Identities=10% Similarity=-0.027 Sum_probs=95.6
Q ss_pred CCCeEEEEcC---cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh---hCCceeeccCc---c-----------ccCC
Q 024143 83 GENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---NMGITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 83 ~~~~IlItGa---GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~---~~~i~~~~~d~---~-----------~~~~ 142 (272)
..++++|||+ +-||+.++++|.++ |++|+...|+......+. ...+..+..|. + ....
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQ--GATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 3468999996 37999999999999 999999988732222221 11233344442 1 1356
Q ss_pred CCEEEEecCCCCC-------CC-----hHHHH-----------HHHHHHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRS-------LD-----YPGDV-----------RLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 143 ~D~Vi~~a~~~~~-------~~-----~~~~~-----------~~l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
+|++||+|+.... .+ +...+ +.++.......++|++||...... .
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~------------~ 151 (252)
T PRK06079 84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA------------I 151 (252)
T ss_pred CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc------------C
Confidence 8999999985321 11 11111 011101112368999998653210 0
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc------HHHHHHHcCcccCCCCcccccccHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG------AHVYWLQKGTVDSRPDHILNLIHYEVNT 264 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~------~~~~~l~~g~~~~~~~~~~~~I~v~Dva 264 (272)
| ....|+.+|...+.+.+.. + +..+.||.+-.+-.. .....+.+..+ ...+...+|+|
T Consensus 152 ~-~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedva 224 (252)
T PRK06079 152 P-NYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTV------DGVGVTIEEVG 224 (252)
T ss_pred C-cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCc------ccCCCCHHHHH
Confidence 1 1257999999998877643 2 577899988654211 00111111111 11256678999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
+++...+
T Consensus 225 ~~~~~l~ 231 (252)
T PRK06079 225 NTAAFLL 231 (252)
T ss_pred HHHHHHh
Confidence 8876543
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.3e-05 Score=67.15 Aligned_cols=152 Identities=18% Similarity=0.185 Sum_probs=89.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~~ 156 (272)
|+++|||+ |.||++++++|.++ ++|++++|++.. +.....|. +...++|+|||+++.....
T Consensus 1 ~~vlItGas~giG~~la~~l~~~---~~vi~~~r~~~~--------~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~ 69 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR---HEVITAGRSSGD--------VQVDITDPASIRALFEKVGKVDAVVSAAGKVHFA 69 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc---CcEEEEecCCCc--------eEecCCChHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 47999996 99999999999876 789999987542 11222221 1234799999999853221
Q ss_pred C--------hHHHHH-------HHHH----HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024143 157 D--------YPGDVR-------LAAL----SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVI 217 (272)
Q Consensus 157 ~--------~~~~~~-------~l~~----~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l 217 (272)
. +.+.+. ++.. ...+..+++++||..... +. | ....|+.+|...+.+.
T Consensus 70 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------~~-~-~~~~Y~~sK~a~~~~~ 136 (199)
T PRK07578 70 PLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE-----------PI-P-GGASAATVNGALEGFV 136 (199)
T ss_pred chhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC-----------CC-C-CchHHHHHHHHHHHHH
Confidence 1 211111 1111 112346799998755321 11 1 1257999998887766
Q ss_pred HHc------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 218 LEF------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 218 ~~~------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.. + ...++|+.+-.+- . ..+... ....++..+|+|+.++.++
T Consensus 137 ~~la~e~~~gi~v~~i~Pg~v~t~~----~---~~~~~~----~~~~~~~~~~~a~~~~~~~ 187 (199)
T PRK07578 137 KAAALELPRGIRINVVSPTVLTESL----E---KYGPFF----PGFEPVPAARVALAYVRSV 187 (199)
T ss_pred HHHHHHccCCeEEEEEcCCcccCch----h---hhhhcC----CCCCCCCHHHHHHHHHHHh
Confidence 532 3 5667888763221 1 011111 1123688999999888765
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.8e-05 Score=70.34 Aligned_cols=168 Identities=14% Similarity=0.115 Sum_probs=93.0
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC---------cchhh----hhhCC--ceeeccCc---c------
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA---------DHHDE----LINMG--ITPSLKWT---E------ 138 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~---------~~~~~----l~~~~--i~~~~~d~---~------ 138 (272)
.++++|||+ +.||+.++++|.++ |++|++++|+. ++... +...+ +..+..|. +
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~--G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 368999996 99999999999999 99999988764 33222 21112 22333332 1
Q ss_pred -----ccCCCCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhc---C---CCeEEEEecceeecC
Q 024143 139 -----ATQKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWN---G---EGSFLFTSSSAIYDC 186 (272)
Q Consensus 139 -----~~~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~---g---vkr~V~~SS~~vYg~ 186 (272)
....+|++||+|+..... + +.+.+ +.++ .... + ..++|++||...+..
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 163 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG 163 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence 135789999999863311 1 11111 1111 0111 1 258999998654321
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCccccc
Q 024143 187 SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNL 257 (272)
Q Consensus 187 ~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~ 257 (272)
. | ....|+.+|...+.+.+.. + +..+.|+ +.-+-.......+.+.. +.....+
T Consensus 164 ~------------~-~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~~~~~----~~~~~~~ 225 (286)
T PRK07791 164 S------------V-GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEMMAKP----EEGEFDA 225 (286)
T ss_pred C------------C-CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHHHhcC----cccccCC
Confidence 1 1 1257999999888776643 3 5667887 32111111111111111 1111234
Q ss_pred ccHHHHHHHHHHHh
Q 024143 258 IHYEVNTLVLFIAS 271 (272)
Q Consensus 258 I~v~Dva~ai~~a~ 271 (272)
...+|+|++++..+
T Consensus 226 ~~pedva~~~~~L~ 239 (286)
T PRK07791 226 MAPENVSPLVVWLG 239 (286)
T ss_pred CCHHHHHHHHHHHh
Confidence 67899998887654
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.1e-06 Score=80.53 Aligned_cols=135 Identities=15% Similarity=0.146 Sum_probs=85.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CC--ceeeccCc---c-----------ccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MG--ITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~--i~~~~~d~---~-----------~~~~~D~ 145 (272)
.++++|||+ +.||..++++|.++ |++|+.+.|+.++...+.. .+ +..+..|. + ....+|+
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARA--GDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999996 99999999999999 9999999998776554432 12 22333332 1 1357999
Q ss_pred EEEecCCCCC-----CC-----hHHHH-----------HHHH--HHhcCC-CeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRS-----LD-----YPGDV-----------RLAA--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 146 Vi~~a~~~~~-----~~-----~~~~~-----------~~l~--~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+||+|+.... .+ +.+.+ +.++ ....+. .++|++||....... |
T Consensus 83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~------------~- 149 (520)
T PRK06484 83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL------------P- 149 (520)
T ss_pred EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC------------C-
Confidence 9999985210 11 11111 1111 112333 389999997643211 1
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
....|+.+|...+.+.+.. + ++.++|+.+-.+
T Consensus 150 ~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~ 190 (520)
T PRK06484 150 KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQ 190 (520)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCch
Confidence 1157999999998876543 2 577899887544
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=7.1e-06 Score=77.61 Aligned_cols=134 Identities=12% Similarity=0.060 Sum_probs=81.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc--hhhhh-hCCceeeccCc---c-----------ccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELI-NMGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~--~~~l~-~~~i~~~~~d~---~-----------~~~~~D 144 (272)
..++++|||+ |.||..+++.|.++ |++|++++|.... ...+. ..+...+..|. + ...++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~--Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARD--GAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 3468999997 99999999999999 9999999885322 22221 12333333332 1 123689
Q ss_pred EEEEecCCCCCCC--------hHHHHH-------HHHH------HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSLD--------YPGDVR-------LAAL------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~~-------~l~~------~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
+|||+++...... +...+. .+.. ......+||++||...+.... . .
T Consensus 287 ~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~-----------~--~ 353 (450)
T PRK08261 287 IVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR-----------G--Q 353 (450)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-----------C--C
Confidence 9999998643211 111111 1110 112236899999976432110 1 1
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCcee
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iy 231 (272)
..|+.+|...+.+++.+ + ...+.|+.+-
T Consensus 354 ~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~ 390 (450)
T PRK08261 354 TNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIE 390 (450)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCc
Confidence 57999998777666543 2 5678888764
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.1e-05 Score=69.41 Aligned_cols=133 Identities=10% Similarity=0.004 Sum_probs=83.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC--ceeeccCc---c-----------ccC-
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------ATQ- 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~--i~~~~~d~---~-----------~~~- 141 (272)
.++++|||+ +-||+.++++|.++ |++|+.+.|++++.+.+. ..+ +..+..|. + .+.
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~--G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARL--GATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 468999997 88999999999999 999999999877654432 112 22333332 1 234
Q ss_pred CCCEEEEecCCCC----CCC-----hHHHHH----H-------HH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSR----SLD-----YPGDVR----L-------AA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~----~~~-----~~~~~~----~-------l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.+|++||+++... ..+ +.+.+. . ++ ....+ ...+|++||...+ +
T Consensus 83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~------------~- 149 (227)
T PRK08862 83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH------------Q- 149 (227)
T ss_pred CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC------------C-
Confidence 7999999996321 111 221111 1 11 11222 4689999985321 0
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
+. ..|+.+|...+.+.+.. + +..+.||.+-.+.
T Consensus 150 -~~--~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~ 191 (227)
T PRK08862 150 -DL--TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG 191 (227)
T ss_pred -Cc--chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence 11 46888999888766543 2 5678899876653
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.39 E-value=1e-05 Score=65.22 Aligned_cols=130 Identities=15% Similarity=0.048 Sum_probs=78.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCC-eEEEEecCCcchh-------hhhhCC--ceeeccCc---c-----------c
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHD-------ELINMG--ITPSLKWT---E-----------A 139 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~-------~l~~~~--i~~~~~d~---~-----------~ 139 (272)
++++|+|+ |.||.+++++|.++ |+ .|+.+.|++.... .+...+ +..+..|. + .
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAER--GARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHh--hCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36899986 99999999999998 86 6888888754322 222222 22333442 1 1
Q ss_pred cCCCCEEEEecCCCCCC--------ChHH-------HHHHHHH--HhcCCCeEEEEeccee-ecCCCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSL--------DYPG-------DVRLAAL--SWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~--------~~~~-------~~~~l~~--~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~p~~p~ 201 (272)
...+|.|||+++..... ++.+ ....++. ...+.+++|++||... |+.. .
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~------------~- 145 (180)
T smart00822 79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNP------------G- 145 (180)
T ss_pred cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCC------------C-
Confidence 24579999999853211 0111 1111111 2335688999998653 2211 1
Q ss_pred CCChHHHHHHHHHHHHHHc---C--eeEEeeCce
Q 024143 202 GRSPRTDVLLKAEKVILEF---G--GCVLRLAGL 230 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~---~--~~IlRp~~i 230 (272)
...|+.+|...+.+++.. + .+.+.|+.+
T Consensus 146 -~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 146 -QANYAAANAFLDALAAHRRARGLPATSINWGAW 178 (180)
T ss_pred -chhhHHHHHHHHHHHHHHHhcCCceEEEeeccc
Confidence 157889999999887653 2 566666643
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=6e-06 Score=72.00 Aligned_cols=70 Identities=14% Similarity=0.164 Sum_probs=48.6
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-cchhhhhhCCceeeccCc-------cccCCCCEEEEecCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELINMGITPSLKWT-------EATQKFPYVIFCAPP 152 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~ 152 (272)
+..++++|||+ |.||++++++|.++ |++|++++|++ +............+.+|. +.+.++|++||+|+.
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAK--GAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 44578999997 99999999999999 99999999876 222111111112223332 245679999999986
Q ss_pred C
Q 024143 153 S 153 (272)
Q Consensus 153 ~ 153 (272)
.
T Consensus 90 ~ 90 (245)
T PRK12367 90 N 90 (245)
T ss_pred C
Confidence 3
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.4e-05 Score=71.82 Aligned_cols=123 Identities=15% Similarity=0.094 Sum_probs=73.9
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-chh----hhhhCC--ceeeccCc---c----------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHD----ELINMG--ITPSLKWT---E----------AT 140 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-~~~----~l~~~~--i~~~~~d~---~----------~~ 140 (272)
+..++++|||+ |.||++++++|.++ |++|+..++... ..+ .+...+ +..+..|. + ..
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~--Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~ 87 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARL--GATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL 87 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 34578999997 99999999999999 999999887532 222 222222 23333442 1 12
Q ss_pred CCCCEEEEecCCCCCC--------ChHHHH-------HHHH------HHhc-------CCCeEEEEecceeecCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSL--------DYPGDV-------RLAA------LSWN-------GEGSFLFTSSSAIYDCSDNGAC 192 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~--------~~~~~~-------~~l~------~~~~-------gvkr~V~~SS~~vYg~~~~~~~ 192 (272)
..+|+|||+|+..... ++.+.+ ..+. .... ...++|++||...+...
T Consensus 88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 162 (306)
T PRK07792 88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP----- 162 (306)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC-----
Confidence 4689999999864321 111111 0111 0100 12589999987643211
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHH
Q 024143 193 DEDSPVVPIGRSPRTDVLLKAEKVILE 219 (272)
Q Consensus 193 ~E~~p~~p~~~~~y~~sk~~aE~~l~~ 219 (272)
+ ....|+.+|...|.+.+.
T Consensus 163 -------~-~~~~Y~asKaal~~l~~~ 181 (306)
T PRK07792 163 -------V-GQANYGAAKAGITALTLS 181 (306)
T ss_pred -------C-CCchHHHHHHHHHHHHHH
Confidence 0 114799999999887654
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.7e-05 Score=68.81 Aligned_cols=132 Identities=10% Similarity=-0.014 Sum_probs=80.9
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC---ceeeccCc---c-----------ccCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG---ITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~---i~~~~~d~---~-----------~~~~ 142 (272)
|+++|||+ +-||..++++|. + |++|+.+.|++++.+.+. ..+ +..+..|. + ....
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~--g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 77 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H--GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGE 77 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C--CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence 46899997 899999999997 7 899999999877655432 222 33344442 1 2347
Q ss_pred CCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.|++||+++..... + +.+.+ ..++ ....+ ..++|++||...+-.. |
T Consensus 78 id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~------------~ 145 (246)
T PRK05599 78 ISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR------------R 145 (246)
T ss_pred CCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC------------c
Confidence 89999999863211 1 11111 0011 11222 4689999997532110 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceec
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG 232 (272)
....|+.+|...+.+.+.. + ...+.||.+..
T Consensus 146 -~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T 185 (246)
T PRK05599 146 -ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIG 185 (246)
T ss_pred -CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccc
Confidence 1257999998887766543 2 45678887754
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=9e-06 Score=70.36 Aligned_cols=167 Identities=14% Similarity=0.018 Sum_probs=88.1
Q ss_pred HHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCcc----c----cCCCCEEEEecCCCCCCChHHHH-------H
Q 024143 99 VAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----A----TQKFPYVIFCAPPSRSLDYPGDV-------R 163 (272)
Q Consensus 99 l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~----~----~~~~D~Vi~~a~~~~~~~~~~~~-------~ 163 (272)
++++|.++ |++|++++|++++.... ..+.....|.+ . ..++|+|||+|+.....++...+ .
T Consensus 1 ~a~~l~~~--G~~Vv~~~r~~~~~~~~--~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~~ 76 (241)
T PRK12428 1 TARLLRFL--GARVIGVDRREPGMTLD--GFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGLR 76 (241)
T ss_pred ChHHHHhC--CCEEEEEeCCcchhhhh--HhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHHH
Confidence 47889999 99999999987654211 11222222221 1 23689999999864332221111 1
Q ss_pred HHH---H-HhcCCCeEEEEecceeecCCCCCCCCCC----------------CCCCCCCCChHHHHHHHHHHHHHH----
Q 024143 164 LAA---L-SWNGEGSFLFTSSSAIYDCSDNGACDED----------------SPVVPIGRSPRTDVLLKAEKVILE---- 219 (272)
Q Consensus 164 ~l~---~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~----------------~p~~p~~~~~y~~sk~~aE~~l~~---- 219 (272)
.+. . .....+++|++||...|+.....+..|. .|..+ .+.|+.+|...|.+.+.
T Consensus 77 ~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~sK~a~~~~~~~la~~ 154 (241)
T PRK12428 77 HLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVAL--ATGYQLSKEALILWTMRQAQP 154 (241)
T ss_pred HHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCc--ccHHHHHHHHHHHHHHHHHHH
Confidence 111 1 1112369999999988863211111110 12222 26899999998865432
Q ss_pred -c---C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 220 -F---G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 220 -~---~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+ + +..++||.+..+-......................+...+|+|++++..+
T Consensus 155 e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~ 212 (241)
T PRK12428 155 WFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLC 212 (241)
T ss_pred hhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHc
Confidence 2 3 57899999987742211100000000000001122456789998876543
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.2e-05 Score=72.38 Aligned_cols=63 Identities=13% Similarity=0.072 Sum_probs=44.5
Q ss_pred EEEcC-cHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhh----C--CceeeccCc---c-----------ccCCCCE
Q 024143 88 LIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN----M--GITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 88 lItGa-GfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~----~--~i~~~~~d~---~-----------~~~~~D~ 145 (272)
+|||+ +-||.+++++|.++ | ++|++..|+.++...+.. . .+.....|. + ....+|+
T Consensus 1 lITGas~GIG~aia~~l~~~--G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 78 (308)
T PLN00015 1 IITGASSGLGLATAKALAET--GKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV 78 (308)
T ss_pred CEeCCCChHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence 58996 99999999999999 9 999999998665433221 1 123333342 1 1246899
Q ss_pred EEEecCC
Q 024143 146 VIFCAPP 152 (272)
Q Consensus 146 Vi~~a~~ 152 (272)
+||+|+.
T Consensus 79 lInnAG~ 85 (308)
T PLN00015 79 LVCNAAV 85 (308)
T ss_pred EEECCCc
Confidence 9999985
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.5e-05 Score=68.04 Aligned_cols=135 Identities=15% Similarity=0.045 Sum_probs=80.9
Q ss_pred CCeEEEEcC-c--HHHHHHHHHHHhcCCCCeEEEEecCCcch---hhhhh-CC-ceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHH---DELIN-MG-ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-G--fiG~~l~~~L~~~~~g~~V~~~~R~~~~~---~~l~~-~~-i~~~~~d~---~-----------~~~ 141 (272)
.+.+||||+ + -||+.++++|.++ |++|+...|+.... ..+.. .+ ...+..|. + ...
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAAQ--GAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhC--CCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 367999997 4 7999999999999 99999988864322 22211 12 12233342 1 235
Q ss_pred CCCEEEEecCCCCC----C---C-----hHHHHH-H----------HHHHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS----L---D-----YPGDVR-L----------AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~----~---~-----~~~~~~-~----------l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.+|++||+|+.... . + |.+.+. + ++.....-.++|++||......
T Consensus 85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~------------ 152 (271)
T PRK06505 85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV------------ 152 (271)
T ss_pred CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc------------
Confidence 79999999985321 1 1 111111 1 0000112268999998653210
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
.|. ...|+.+|...+.+.+.. + +..+.||.+-.+
T Consensus 153 ~~~-~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~ 195 (271)
T PRK06505 153 MPN-YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTL 195 (271)
T ss_pred CCc-cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccc
Confidence 111 257999999988776653 2 567889988654
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=8.9e-05 Score=64.93 Aligned_cols=167 Identities=8% Similarity=-0.049 Sum_probs=93.6
Q ss_pred CCeEEEEcC---cHHHHHHHHHHHhcCCCCeEEEEecCCc---chhhhhhC-C-ceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELINM-G-ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa---GfiG~~l~~~L~~~~~g~~V~~~~R~~~---~~~~l~~~-~-i~~~~~d~---~-----------~~~ 141 (272)
.++++|||+ +-||++++++|.++ |++|+...|... ...++... + ...+.+|. + ...
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQ--GAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 368999993 58999999999999 999998766532 22222211 1 22333442 1 234
Q ss_pred CCCEEEEecCCCCC--------CC-----hHHHHH-HH------H---HH--hcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS--------LD-----YPGDVR-LA------A---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~--------~~-----~~~~~~-~l------~---~~--~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
++|++||+|+.... ++ +...+. ++ . .. ..+..++|++||...+..
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~---------- 153 (261)
T PRK08690 84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRA---------- 153 (261)
T ss_pred CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccC----------
Confidence 79999999986421 11 111110 00 0 00 112358999998764311
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc------HHHHHHHcCcccCCCCcccccccHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG------AHVYWLQKGTVDSRPDHILNLIHYE 261 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~------~~~~~l~~g~~~~~~~~~~~~I~v~ 261 (272)
.| ....|+.+|...+.+.+.. + +..+.||.+--+-.. .....+.+..+ ...+...+
T Consensus 154 --~~-~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p------~~r~~~pe 224 (261)
T PRK08690 154 --IP-NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNP------LRRNVTIE 224 (261)
T ss_pred --CC-CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCC------CCCCCCHH
Confidence 01 1257899999988776543 2 567889887543110 00001111111 12256789
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++..+
T Consensus 225 evA~~v~~l~ 234 (261)
T PRK08690 225 EVGNTAAFLL 234 (261)
T ss_pred HHHHHHHHHh
Confidence 9999887654
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.3e-06 Score=78.88 Aligned_cols=68 Identities=21% Similarity=0.331 Sum_probs=55.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhhC---CceeeccC---c----cccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINM---GITPSLKW---T----EATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~~---~i~~~~~d---~----~~~~~~D~Vi~~a~~ 152 (272)
|++|+|+|+|.||+.++..|.++ + .+|++.+|++++..++... .++....| . +++++.|+||+|+++
T Consensus 1 m~~ilviGaG~Vg~~va~~la~~--~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 1 MMKILVIGAGGVGSVVAHKLAQN--GDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CCcEEEECCchhHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence 68999999999999999999999 6 8999999998887776444 34444433 2 357888999999987
Q ss_pred C
Q 024143 153 S 153 (272)
Q Consensus 153 ~ 153 (272)
.
T Consensus 79 ~ 79 (389)
T COG1748 79 F 79 (389)
T ss_pred h
Confidence 4
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.4e-05 Score=66.01 Aligned_cols=119 Identities=18% Similarity=0.179 Sum_probs=81.0
Q ss_pred CeEEEEcC--cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-hCCceeeccCc---c------------ccCCCCEE
Q 024143 85 NDLLIVGP--GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWT---E------------ATQKFPYV 146 (272)
Q Consensus 85 ~~IlItGa--GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-~~~i~~~~~d~---~------------~~~~~D~V 146 (272)
++|||||| |-||-+|++++.++ |+.|++..|+.+....|. +.|+.+...|. + ...+.|++
T Consensus 8 k~VlItgcs~GGIG~ala~ef~~~--G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 8 KKVLITGCSSGGIGYALAKEFARN--GYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CeEEEeecCCcchhHHHHHHHHhC--CeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 68999995 99999999999999 999999999988887776 56776665442 1 12367999
Q ss_pred EEecCCCCCCC----hHHHHHHHH---------HH-------hcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 147 IFCAPPSRSLD----YPGDVRLAA---------LS-------WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 147 i~~a~~~~~~~----~~~~~~~l~---------~~-------~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
+++|+...... -.+.+.+.. ++ -.....+|++.|..+|-.. |. .+.|
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpf------------pf-~~iY 152 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPF------------PF-GSIY 152 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEecc------------ch-hhhh
Confidence 99998643211 111222111 00 1234589999999887532 22 2578
Q ss_pred HHHHHHHHHHHH
Q 024143 207 TDVLLKAEKVIL 218 (272)
Q Consensus 207 ~~sk~~aE~~l~ 218 (272)
..+|++.-.+-+
T Consensus 153 sAsKAAihay~~ 164 (289)
T KOG1209|consen 153 SASKAAIHAYAR 164 (289)
T ss_pred hHHHHHHHHhhh
Confidence 889987665544
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00014 Score=63.74 Aligned_cols=134 Identities=10% Similarity=0.063 Sum_probs=79.0
Q ss_pred CCeEEEEcC-c--HHHHHHHHHHHhcCCCCeEEEEecCCc---chhhhhhC-Cc-eeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELINM-GI-TPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-G--fiG~~l~~~L~~~~~g~~V~~~~R~~~---~~~~l~~~-~i-~~~~~d~---~-----------~~~ 141 (272)
.+.++|||+ + -||+.++++|.++ |++|+...|+.. ....+... +. ..+..|. + ...
T Consensus 8 ~k~~lITGas~~~GIG~a~a~~la~~--G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 8 GKKGLITGIANNMSISWAIAQLAKKH--GAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred CcEEEEECCCCCcchHHHHHHHHHHc--CCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 467999997 3 5999999999999 999998888632 22223221 21 1223332 1 235
Q ss_pred CCCEEEEecCCCCC-------CC-----hHHHHH-HHH------H----HhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS-------LD-----YPGDVR-LAA------L----SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~-------~~-----~~~~~~-~l~------~----~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.+|++||+++.... .+ +.+.+. ++. . ....-.++|++||......
T Consensus 86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~------------ 153 (260)
T PRK06603 86 SFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV------------ 153 (260)
T ss_pred CccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC------------
Confidence 69999999985321 11 211111 110 0 0112258999998653210
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceec
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG 232 (272)
.|. ...|+.+|+..+.+.+.. + +..+.||.+-.
T Consensus 154 ~~~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T 195 (260)
T PRK06603 154 IPN-YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKT 195 (260)
T ss_pred CCc-ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcc
Confidence 011 257999999888776643 2 46788888754
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.6e-05 Score=65.65 Aligned_cols=135 Identities=10% Similarity=-0.020 Sum_probs=80.8
Q ss_pred CCeEEEEcC---cHHHHHHHHHHHhcCCCCeEEEEecCC---cchhhhhh----CCceeeccCc---c-----------c
Q 024143 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTA---DHHDELIN----MGITPSLKWT---E-----------A 139 (272)
Q Consensus 84 ~~~IlItGa---GfiG~~l~~~L~~~~~g~~V~~~~R~~---~~~~~l~~----~~i~~~~~d~---~-----------~ 139 (272)
.++++|||+ +-||+.++++|.++ |++|+...|+. +..+.+.. ..+..+..|. + .
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNA--GAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 368999996 58999999999999 99999887753 22333322 1233334442 1 2
Q ss_pred cCCCCEEEEecCCCCC----C---C-----hHHHHH-----------HHHHHhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRS----L---D-----YPGDVR-----------LAALSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~----~---~-----~~~~~~-----------~l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
...+|++|||++.... . + +...+. .++.......++|++||....-
T Consensus 85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------- 153 (257)
T PRK08594 85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER----------- 153 (257)
T ss_pred CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc-----------
Confidence 3568999999985321 1 1 111110 1110111236899999865311
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
+ .| ....|+.+|...+.+.+.. + +..+.||.+..+
T Consensus 154 ~-~~-~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 197 (257)
T PRK08594 154 V-VQ-NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTL 197 (257)
T ss_pred C-CC-CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCH
Confidence 0 01 1257999999998877643 2 567888887543
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=8.4e-05 Score=64.95 Aligned_cols=168 Identities=13% Similarity=0.050 Sum_probs=93.6
Q ss_pred CCCeEEEEcCc---HHHHHHHHHHHhcCCCCeEEEEecCCcch---hhhhhC--CceeeccCc---c-----------cc
Q 024143 83 GENDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMTADHH---DELINM--GITPSLKWT---E-----------AT 140 (272)
Q Consensus 83 ~~~~IlItGaG---fiG~~l~~~L~~~~~g~~V~~~~R~~~~~---~~l~~~--~i~~~~~d~---~-----------~~ 140 (272)
..++++|||++ -||+.++++|.++ |++|+...|+.+.. ..+... ....+..|. + ..
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRAL--GAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc
Confidence 34689999953 7999999999999 99999998875432 222211 122233342 1 13
Q ss_pred CCCCEEEEecCCCCC----C---C-----hHHHHH-----------HHHHHhcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRS----L---D-----YPGDVR-----------LAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~----~---~-----~~~~~~-----------~l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
..+|++||+|+.... . + +.+.++ .++.....-.++|++||..... +
T Consensus 87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~-----~------ 155 (258)
T PRK07533 87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK-----V------ 155 (258)
T ss_pred CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc-----C------
Confidence 578999999985321 0 1 111111 1110011235899999864311 0
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc---HHH---HHHHcCcccCCCCcccccccHHH
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG---AHV---YWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~---~~~---~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
.| ....|+.+|...+.+.+.. + +..+.||.+-.+-.. .+. ..+.+.. + ...+...+|
T Consensus 156 -~~-~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----p--~~r~~~p~d 227 (258)
T PRK07533 156 -VE-NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERA----P--LRRLVDIDD 227 (258)
T ss_pred -Cc-cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcC----C--cCCCCCHHH
Confidence 01 1257999999888766543 2 567888887543110 000 0111111 1 112567799
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|++++..+
T Consensus 228 va~~~~~L~ 236 (258)
T PRK07533 228 VGAVAAFLA 236 (258)
T ss_pred HHHHHHHHh
Confidence 998877554
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.18 E-value=4.1e-05 Score=66.95 Aligned_cols=135 Identities=12% Similarity=0.038 Sum_probs=80.2
Q ss_pred CCeEEEEcC---cHHHHHHHHHHHhcCCCCeEEEEecCCc------chhhhhhC--CceeeccCc---c-----------
Q 024143 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD------HHDELINM--GITPSLKWT---E----------- 138 (272)
Q Consensus 84 ~~~IlItGa---GfiG~~l~~~L~~~~~g~~V~~~~R~~~------~~~~l~~~--~i~~~~~d~---~----------- 138 (272)
.++++|||+ +-||+.++++|.++ |++|+...|+.+ ....+... ....+..|. +
T Consensus 6 ~k~~lItGas~~~GIG~aia~~la~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 6 GKKALVTGIANNRSIAWGIAQQLHAA--GAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CcEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 367999996 48999999999999 999988765432 12222221 122333342 1
Q ss_pred ccCCCCEEEEecCCCCC----CC--------hHHHH-----------HHHHHHhcCCCeEEEEecceeecCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRS----LD--------YPGDV-----------RLAALSWNGEGSFLFTSSSAIYDCSDNGACDED 195 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~----~~--------~~~~~-----------~~l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (272)
....+|++||+++.... .. +.+.+ +.++.....-+++|++||..... +
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~-----~---- 154 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR-----A---- 154 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc-----C----
Confidence 23479999999985321 11 11111 11110011236899999865321 0
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
. |. ...|+.+|...+.+.+.. + +..+.||.+--+
T Consensus 155 --~-~~-~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~ 197 (258)
T PRK07370 155 --I-PN-YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTL 197 (258)
T ss_pred --C-cc-cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCc
Confidence 0 11 257999999998877653 2 567899988544
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=7.1e-05 Score=66.22 Aligned_cols=135 Identities=14% Similarity=0.071 Sum_probs=80.2
Q ss_pred CCeEEEEcC---cHHHHHHHHHHHhcCCCCeEEEEecCCc---chhhhhh-CCc-eeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN-MGI-TPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa---GfiG~~l~~~L~~~~~g~~V~~~~R~~~---~~~~l~~-~~i-~~~~~d~---~-----------~~~ 141 (272)
.++++|||+ +-||+.++++|.++ |++|+...|+.. ..+.+.. .+. ..+..|. + ...
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~--G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQ--GAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 368999996 47999999999999 999999988742 2222221 121 2233332 1 235
Q ss_pred CCCEEEEecCCCCC-------CC-----hHHHH-----------HHHHHHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS-------LD-----YPGDV-----------RLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~-------~~-----~~~~~-----------~~l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.+|++||+|+.... .+ +.+.+ +.++.....-.++|++||..... +
T Consensus 83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~-----~------- 150 (274)
T PRK08415 83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK-----Y------- 150 (274)
T ss_pred CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc-----C-------
Confidence 78999999985321 11 11111 11110111236899999864211 0
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
.|. ...|+.+|...+.+.+.. + +..+.||.+.-+
T Consensus 151 ~~~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (274)
T PRK08415 151 VPH-YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTL 193 (274)
T ss_pred CCc-chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence 111 257999999888776543 2 466888887643
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.5e-05 Score=70.82 Aligned_cols=106 Identities=12% Similarity=0.122 Sum_probs=68.4
Q ss_pred CCCcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh--hhhhC--Cceee-ccC----ccccCCCCEEEE
Q 024143 79 SGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--ELINM--GITPS-LKW----TEATQKFPYVIF 148 (272)
Q Consensus 79 ~~~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~--~l~~~--~i~~~-~~d----~~~~~~~D~Vi~ 148 (272)
|....|+||.|+|+ |.||+.++..|..+.-..+++.+++...+.. .+... ..... ..| .++++++|+||+
T Consensus 3 ~~~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVi 82 (321)
T PTZ00325 3 PSALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLI 82 (321)
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEE
Confidence 34467889999998 9999999999986511468999998432221 11111 11222 122 357899999999
Q ss_pred ecCCCCCC--C----hH---HHHHHHH--HHhcCCCeEEEEecceee
Q 024143 149 CAPPSRSL--D----YP---GDVRLAA--LSWNGEGSFLFTSSSAIY 184 (272)
Q Consensus 149 ~a~~~~~~--~----~~---~~~~~l~--~~~~gvkr~V~~SS~~vY 184 (272)
+++..... . +. +.+++++ ....+++++|+++|-.+.
T Consensus 83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvd 129 (321)
T PTZ00325 83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVN 129 (321)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH
Confidence 99975432 1 11 1233333 246789999999997763
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.9e-05 Score=67.13 Aligned_cols=136 Identities=13% Similarity=0.054 Sum_probs=80.8
Q ss_pred cCCCeEEEEcC---cHHHHHHHHHHHhcCCCCeEEEEecCC---cchhhhhhC-C-ceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTA---DHHDELINM-G-ITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa---GfiG~~l~~~L~~~~~g~~V~~~~R~~---~~~~~l~~~-~-i~~~~~d~---~-----------~ 139 (272)
+..++++|||+ +-||..++++|.++ |++|+...|+. ++.+.+... + ...+..|. + .
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~--G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAA--GAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 34478999996 57999999999999 99999887763 222223221 2 22333442 1 1
Q ss_pred cCCCCEEEEecCCCCC----C---C-----hHHHHH-HH------H---H-HhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRS----L---D-----YPGDVR-LA------A---L-SWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~----~---~-----~~~~~~-~l------~---~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
...+|++||+|+.... . + +...+. ++ . . ...+-.++|++||.+.+. +
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~-----~----- 155 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK-----V----- 155 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc-----C-----
Confidence 3468999999985321 0 1 111111 11 0 0 111236899999864321 0
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceec
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG 232 (272)
.|. ...|+.+|...+.+.+.. + +..+.||.+.-
T Consensus 156 --~p~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T 197 (272)
T PRK08159 156 --MPH-YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKT 197 (272)
T ss_pred --CCc-chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCC
Confidence 111 257999999988777643 2 56788888753
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.8e-05 Score=68.89 Aligned_cols=132 Identities=11% Similarity=0.003 Sum_probs=79.4
Q ss_pred eEEEEcC-cHHHHHHHHHHHh----cCCCCeEEEEecCCcchhhhh----h----CCceeeccCc---c--------ccC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQ----EHPGCQIYGQTMTADHHDELI----N----MGITPSLKWT---E--------ATQ 141 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~----~~~g~~V~~~~R~~~~~~~l~----~----~~i~~~~~d~---~--------~~~ 141 (272)
.++|||+ +.||.+++++|.+ + |++|+.+.|++++.+.+. . ..+..+..|. + ..+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~ 79 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSP--GSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRE 79 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccC--CcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHh
Confidence 4889997 9999999999987 6 999999999876554332 1 1233343442 1 111
Q ss_pred -------CCCEEEEecCCCCC-----C---C---hHHHH-----------HHHH--HHhc-C-CCeEEEEecceeecCCC
Q 024143 142 -------KFPYVIFCAPPSRS-----L---D---YPGDV-----------RLAA--LSWN-G-EGSFLFTSSSAIYDCSD 188 (272)
Q Consensus 142 -------~~D~Vi~~a~~~~~-----~---~---~~~~~-----------~~l~--~~~~-g-vkr~V~~SS~~vYg~~~ 188 (272)
+.|+|||+|+.... . + +.+.+ +.++ .... + .+++|++||...+...
T Consensus 80 ~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~- 158 (256)
T TIGR01500 80 LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPF- 158 (256)
T ss_pred ccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCC-
Confidence 12689999985211 1 1 11111 1111 1112 2 3689999997643211
Q ss_pred CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceec
Q 024143 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (272)
Q Consensus 189 ~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG 232 (272)
| ....|+.+|...+.+.+.. + ...+.||.+-.
T Consensus 159 -----------~-~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T 199 (256)
T TIGR01500 159 -----------K-GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDT 199 (256)
T ss_pred -----------C-CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccc
Confidence 1 1257999999998877653 2 46678888743
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.3e-05 Score=68.88 Aligned_cols=182 Identities=19% Similarity=0.192 Sum_probs=109.8
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh-----hhhhC-----C--ceeeccCc-c--------ccCCC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----ELINM-----G--ITPSLKWT-E--------ATQKF 143 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~-----~l~~~-----~--i~~~~~d~-~--------~~~~~ 143 (272)
--||||- |.=|+.|++.|+.+ ||+|.++.|...... .+-.. + .....+|. + ..-++
T Consensus 30 vALITGItGQDGSYLaEfLL~K--gYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP 107 (376)
T KOG1372|consen 30 VALITGITGQDGSYLAEFLLSK--GYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP 107 (376)
T ss_pred EEEEecccCCCchHHHHHHHhC--CceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence 4678995 99999999999999 999999998755432 22111 0 11122332 1 12367
Q ss_pred CEEEEecCCCCC------CCh------HHHHHHHHH-HhcC---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 144 PYVIFCAPPSRS------LDY------PGDVRLAAL-SWNG---EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 144 D~Vi~~a~~~~~------~~~------~~~~~~l~~-~~~g---vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
+-|+|+|+.++. .+| +.+++.+-+ ..++ .-||-..||...||.....|.+|.+|..|. +||+
T Consensus 108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPR--SPYa 185 (376)
T KOG1372|consen 108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPR--SPYA 185 (376)
T ss_pred hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCC--ChhH
Confidence 888999987542 122 222222211 1222 247889999999998667789999999997 8999
Q ss_pred HHHHHHHHHHHHcC---eeEEeeCceec---CCCc-HHHH--------HHHcCcc----cCCCCcccccccHHHHHHHHH
Q 024143 208 DVLLKAEKVILEFG---GCVLRLAGLYK---ADRG-AHVY--------WLQKGTV----DSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 208 ~sk~~aE~~l~~~~---~~IlRp~~iyG---~~~~-~~~~--------~l~~g~~----~~~~~~~~~~I~v~Dva~ai~ 268 (272)
.+|..+=-++-++. .....-|.++. |.++ .|.. .+.-|+. +++-+..+||=|..|-++++.
T Consensus 186 ~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW 265 (376)
T KOG1372|consen 186 AAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMW 265 (376)
T ss_pred HhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHH
Confidence 88754322211111 11112233332 2222 1211 1222332 466688999999999999988
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 266 ~mL 268 (376)
T KOG1372|consen 266 LML 268 (376)
T ss_pred HHH
Confidence 765
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.11 E-value=6.5e-05 Score=66.55 Aligned_cols=121 Identities=17% Similarity=0.052 Sum_probs=77.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hh---CC-ceeeccCc---c-----------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN---MG-ITPSLKWT---E-----------A 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~---~~-i~~~~~d~---~-----------~ 139 (272)
..+.|+|||| .-||.+++.+|.++ |.+++.+.|..++++.+ .+ .. +....+|. + .
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~--G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKR--GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC--CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence 3467999998 88999999999999 99888888876665544 21 12 33344442 1 3
Q ss_pred cCCCCEEEEecCCCCCCC----hHHHHH---------------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD----YPGDVR---------------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~----~~~~~~---------------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
+.++|++||+|+...... -.+.++ .++ +...+-.++|.+||..-+-.. |.
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~---------P~ 159 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL---------PF 159 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC---------Cc
Confidence 568999999999754210 111222 111 123446899999998732110 11
Q ss_pred CCCCCChHHHHHHHHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVIL 218 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~ 218 (272)
. ..|..||.+.+.+..
T Consensus 160 ~----~~Y~ASK~Al~~f~e 175 (282)
T KOG1205|consen 160 R----SIYSASKHALEGFFE 175 (282)
T ss_pred c----cccchHHHHHHHHHH
Confidence 1 368889998886654
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00011 Score=66.07 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=30.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
.++++|||+ +-||.+++++|.++ |++|+++.|+.
T Consensus 8 ~k~~lITGgs~GIG~aia~~la~~--G~~Vv~~~r~~ 42 (305)
T PRK08303 8 GKVALVAGATRGAGRGIAVELGAA--GATVYVTGRST 42 (305)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeccc
Confidence 468999996 89999999999999 99999999873
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=98.08 E-value=3.7e-05 Score=62.11 Aligned_cols=120 Identities=21% Similarity=0.130 Sum_probs=74.8
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCC-eEEEEecC--Ccchhhh----hhCC--ceeeccCc---c-----------cc
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMT--ADHHDEL----INMG--ITPSLKWT---E-----------AT 140 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~-~V~~~~R~--~~~~~~l----~~~~--i~~~~~d~---~-----------~~ 140 (272)
|+++|||+ +-||+.++++|.++ |. .|+.+.|+ .+....+ ...+ +.....|. + ..
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~--g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARR--GARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhc--CceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc
Confidence 47899996 99999999999999 65 77777887 3333322 3223 33444442 1 23
Q ss_pred CCCCEEEEecCCCCCCCh----HHHHHHHH-------------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLDY----PGDVRLAA-------------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~~----~~~~~~l~-------------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
...|++|||++....... .+.+...+ ....+.+++|++||....-.. | ..
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------~-~~ 145 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGS------------P-GM 145 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSS------------T-TB
T ss_pred ccccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCC------------C-CC
Confidence 589999999997553210 11111111 011457899999997643211 1 12
Q ss_pred ChHHHHHHHHHHHHHH
Q 024143 204 SPRTDVLLKAEKVILE 219 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~ 219 (272)
..|+.+|...+.+.+.
T Consensus 146 ~~Y~askaal~~~~~~ 161 (167)
T PF00106_consen 146 SAYSASKAALRGLTQS 161 (167)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHH
Confidence 5899999999887764
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.08 E-value=4.3e-06 Score=68.38 Aligned_cols=67 Identities=19% Similarity=0.319 Sum_probs=54.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|++|.++|.|-+|+.+++.|.+. |++|++.+|++++.+.+...++.......++.+++|+||-|.+.
T Consensus 1 m~~Ig~IGlG~mG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~ 67 (163)
T PF03446_consen 1 MMKIGFIGLGNMGSAMARNLAKA--GYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPD 67 (163)
T ss_dssp -BEEEEE--SHHHHHHHHHHHHT--TTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSS
T ss_pred CCEEEEEchHHHHHHHHHHHHhc--CCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeeccc
Confidence 78999999999999999999999 99999999999998888877766654333567788999999875
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.0002 Score=62.97 Aligned_cols=134 Identities=12% Similarity=0.009 Sum_probs=78.6
Q ss_pred CCeEEEEcCc---HHHHHHHHHHHhcCCCCeEEEEecCCc---chhhhhhC--CceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELINM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGaG---fiG~~l~~~L~~~~~g~~V~~~~R~~~---~~~~l~~~--~i~~~~~d~---~-----------~~~ 141 (272)
.++++|||++ -||+.++++|.++ |++|+...|+.. ..+.+... ....+..|. + ...
T Consensus 6 ~k~~lITGas~~~GIG~aia~~la~~--G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 6 GKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHHC--CCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 3679999973 6999999999999 999998888632 22222221 122333442 1 134
Q ss_pred CCCEEEEecCCCCC--------CC-----hHHHHH-H------H---HHH-hcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS--------LD-----YPGDVR-L------A---ALS-WNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~--------~~-----~~~~~~-~------l---~~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
.+|++||+|+.... .+ |...+. + + +.. ...-.++|++||.+... +
T Consensus 84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~-----~------ 152 (262)
T PRK07984 84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----A------ 152 (262)
T ss_pred CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC-----C------
Confidence 68999999985321 00 111110 0 0 000 11235899999865311 0
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceec
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG 232 (272)
.|. ...|+.+|...+.+.+.. + +..+-||.+--
T Consensus 153 -~~~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T 194 (262)
T PRK07984 153 -IPN-YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRT 194 (262)
T ss_pred -CCC-cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccc
Confidence 111 257999999998877653 2 45677887743
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.0002 Score=62.69 Aligned_cols=167 Identities=13% Similarity=0.025 Sum_probs=92.6
Q ss_pred CCeEEEEcC---cHHHHHHHHHHHhcCCCCeEEEEecC---Ccchhhhhh-CC-ceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMT---ADHHDELIN-MG-ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa---GfiG~~l~~~L~~~~~g~~V~~~~R~---~~~~~~l~~-~~-i~~~~~d~---~-----------~~~ 141 (272)
.++++|||+ +-||..++++|.++ |++|+...|. .++...+.. .+ ...+..|. + ...
T Consensus 6 ~k~vlItGas~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 6 GKRILITGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CcEEEEeCCCCCCcHHHHHHHHHHHC--CCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 368999993 58999999999999 9999987654 233333221 11 11223332 1 235
Q ss_pred CCCEEEEecCCCCC--------CC-----hHHHHH-H----------HHHHhcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS--------LD-----YPGDVR-L----------AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~--------~~-----~~~~~~-~----------l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
.+|++||+|+.... .+ +...+. + ++....+.+++|++||....- +
T Consensus 84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~-----~------ 152 (260)
T PRK06997 84 GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER-----V------ 152 (260)
T ss_pred CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc-----C------
Confidence 79999999985321 11 111111 1 110112236899999865311 0
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH---HH---HHHHcCcccCCCCcccccccHHH
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA---HV---YWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~---~~---~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
.|. ...|+.+|...+.+.+.. + +..+.||.+--+-... .. ..+.+.. + ..-+...+|
T Consensus 153 -~~~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~----p--~~r~~~ped 224 (260)
T PRK06997 153 -VPN-YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNA----P--LRRNVTIEE 224 (260)
T ss_pred -CCC-cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcC----c--ccccCCHHH
Confidence 011 257999999988776643 2 5678898875431110 00 0011111 1 112567899
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+++++...+
T Consensus 225 va~~~~~l~ 233 (260)
T PRK06997 225 VGNVAAFLL 233 (260)
T ss_pred HHHHHHHHh
Confidence 999877654
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00045 Score=60.27 Aligned_cols=167 Identities=10% Similarity=-0.052 Sum_probs=91.8
Q ss_pred CCeEEEEcC---cHHHHHHHHHHHhcCCCCeEEEEecCC--cchhhhhh---CCceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTA--DHHDELIN---MGITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa---GfiG~~l~~~L~~~~~g~~V~~~~R~~--~~~~~l~~---~~i~~~~~d~---~-----------~~~ 141 (272)
.++++|||+ +-||.+++++|.++ |++|+.+.|+. +..+.+.. ..+..+..|. + ...
T Consensus 7 ~k~~lItGa~~s~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 7 GKRILVTGVITDSSIAFHVARVAQEQ--GAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred CCEEEEeCCCCcchHHHHHHHHHHHC--CCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 368999995 68999999999999 99999988764 22333321 1233344442 1 235
Q ss_pred CCCEEEEecCCCCC-------CC-----hHHHHH-H----------HHHHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS-------LD-----YPGDVR-L----------AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~-------~~-----~~~~~~-~----------l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.+|++||+|+.... .+ +.+.+. + ++.....-.++|++|+....+
T Consensus 85 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~------------- 151 (256)
T PRK07889 85 GLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA------------- 151 (256)
T ss_pred CCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc-------------
Confidence 79999999985321 01 111110 1 110011225788887532110
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEVN 263 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~Dv 263 (272)
.|. ...|+.+|...+.+.+.. + +..+.||.+--+-... ....+.+..+. .+.+...+|+
T Consensus 152 ~~~-~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-----~~~~~~p~ev 225 (256)
T PRK07889 152 WPA-YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPL-----GWDVKDPTPV 225 (256)
T ss_pred CCc-cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCcc-----ccccCCHHHH
Confidence 111 246899999888766543 2 5667888875431100 00001110110 0135678999
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
|++++..+
T Consensus 226 A~~v~~l~ 233 (256)
T PRK07889 226 ARAVVALL 233 (256)
T ss_pred HHHHHHHh
Confidence 99887654
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.86 E-value=9.5e-05 Score=66.66 Aligned_cols=96 Identities=16% Similarity=0.156 Sum_probs=60.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhh-----------hhhCCce------------eeccCc-cc
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-----------LINMGIT------------PSLKWT-EA 139 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~-----------l~~~~i~------------~~~~d~-~~ 139 (272)
+++|.|+|+|.+|+.++..|.+. |++|++.+|+++..+. +...+.. ....+. ++
T Consensus 2 ~~~V~VIG~G~mG~~iA~~la~~--G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a 79 (308)
T PRK06129 2 MGSVAIIGAGLIGRAWAIVFARA--GHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADA 79 (308)
T ss_pred CcEEEEECccHHHHHHHHHHHHC--CCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHh
Confidence 46899999999999999999999 9999999998765443 2122310 111232 35
Q ss_pred cCCCCEEEEecCCCCCCChHHHHHHHHHHhcCCCeEEEEecceee
Q 024143 140 TQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIY 184 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~~~~~~~~l~~~~~gvkr~V~~SS~~vY 184 (272)
+.++|+||.|.+.... ....+-..+ .....+..++.||+..+
T Consensus 80 ~~~ad~Vi~avpe~~~--~k~~~~~~l-~~~~~~~~ii~ssts~~ 121 (308)
T PRK06129 80 VADADYVQESAPENLE--LKRALFAEL-DALAPPHAILASSTSAL 121 (308)
T ss_pred hCCCCEEEECCcCCHH--HHHHHHHHH-HHhCCCcceEEEeCCCC
Confidence 7899999998864311 111111111 11223455667777765
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=97.85 E-value=5.4e-05 Score=55.88 Aligned_cols=67 Identities=22% Similarity=0.356 Sum_probs=51.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCC---CeEEEE-ecCCcchhhhhh-CCceeeccC-ccccCCCCEEEEecCCCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPG---CQIYGQ-TMTADHHDELIN-MGITPSLKW-TEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g---~~V~~~-~R~~~~~~~l~~-~~i~~~~~d-~~~~~~~D~Vi~~a~~~~ 154 (272)
||.|+|+|.+|..|++.|.+. | ++|... +|++++..++.. .++.....+ .++.+.+|+||.|..|..
T Consensus 1 kI~iIG~G~mg~al~~~l~~~--g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~ 73 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLAS--GIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQ 73 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHT--TS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGG
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHH
Confidence 688999999999999999999 8 999955 999988877643 344544422 357779999999999865
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=4.6e-05 Score=65.83 Aligned_cols=60 Identities=20% Similarity=0.270 Sum_probs=38.9
Q ss_pred cHHHHHHHHHHHhcCCCCeEEEEecCCcch-hhhh-hCCceeecc--Cc-----ccc--CCCCEEEEecCCCC
Q 024143 93 GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELI-NMGITPSLK--WT-----EAT--QKFPYVIFCAPPSR 154 (272)
Q Consensus 93 GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~-~~l~-~~~i~~~~~--d~-----~~~--~~~D~Vi~~a~~~~ 154 (272)
||+|++|+++|+++ |++|+.+++..... ..+. ......+.. |. +.+ .++|+|||+|+..+
T Consensus 29 GfiGs~LA~~L~~~--Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 29 GTIGRIIAEELISK--GAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred CHHHHHHHHHHHHC--CCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHHHhcccCCCEEEECccccc
Confidence 99999999999999 99999888642211 1111 112223333 21 133 36899999999754
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00049 Score=62.20 Aligned_cols=146 Identities=14% Similarity=0.052 Sum_probs=88.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hh----CCceeeccCcc--------------cc
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN----MGITPSLKWTE--------------AT 140 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~----~~i~~~~~d~~--------------~~ 140 (272)
.+.++|||+ .-||..++++|..+ |.+|+...|+..+.... .. ..+.....|.. ..
T Consensus 35 ~~~~vVTGansGIG~eta~~La~~--Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 35 GKVALVTGATSGIGFETARELALR--GAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CcEEEEECCCCchHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 367999997 89999999999999 99999999987543322 21 12333444531 24
Q ss_pred CCCCEEEEecCCCCC-----CC---------hHHH--H-HHHH--HHhcCCCeEEEEecceeecC--CCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRS-----LD---------YPGD--V-RLAA--LSWNGEGSFLFTSSSAIYDC--SDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~-----~~---------~~~~--~-~~l~--~~~~gvkr~V~~SS~~vYg~--~~~~~~~E~~p~~ 199 (272)
...|+.|++|+.... .| |... + +.++ +......|+|++||..- +. .-+....|.....
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~~ 191 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKLY 191 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccCc
Confidence 578999999985321 11 1111 1 1122 13334489999999764 21 1112233332211
Q ss_pred CCCCChHHHHHHHHHHHHHHc------C--eeEEeeCceecC
Q 024143 200 PIGRSPRTDVLLKAEKVILEF------G--GCVLRLAGLYKA 233 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~------~--~~IlRp~~iyG~ 233 (272)
.. ...|+++|.+......+. + ...+.||.+..+
T Consensus 192 ~~-~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~ 232 (314)
T KOG1208|consen 192 SS-DAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTT 232 (314)
T ss_pred cc-hhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccccc
Confidence 11 125999998876555443 3 567899988766
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0007 Score=59.98 Aligned_cols=120 Identities=18% Similarity=0.132 Sum_probs=74.9
Q ss_pred CCcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhhCC-ceeeccCc---c-----------c
Q 024143 80 GGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG-ITPSLKWT---E-----------A 139 (272)
Q Consensus 80 ~~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~~~-i~~~~~d~---~-----------~ 139 (272)
.......|||||+ +-+|+.++.++.++ |.++...+.+++...+ ....| +..+.+|. + .
T Consensus 34 k~v~g~~vLITGgg~GlGr~ialefa~r--g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 34 KSVSGEIVLITGGGSGLGRLIALEFAKR--GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE 111 (300)
T ss_pred hhccCCEEEEeCCCchHHHHHHHHHHHh--CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 3345578999998 67999999999999 9999999987654332 22223 33444442 1 3
Q ss_pred cCCCCEEEEecCCCCCCC-------hH------------HHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD-------YP------------GDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~-------~~------------~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
..++|++|++|+...... -. ..+++.+ +.+..-.++|-++|..-+-.
T Consensus 112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g------------ 179 (300)
T KOG1201|consen 112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFG------------ 179 (300)
T ss_pred cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccC------------
Confidence 458999999999633211 01 1112222 12445679999998753211
Q ss_pred CCCCCChHHHHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAE 214 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE 214 (272)
+.+..+|+.||.++.
T Consensus 180 -~~gl~~YcaSK~a~v 194 (300)
T KOG1201|consen 180 -PAGLADYCASKFAAV 194 (300)
T ss_pred -CccchhhhhhHHHHH
Confidence 111257888987764
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00018 Score=67.67 Aligned_cols=68 Identities=13% Similarity=0.154 Sum_probs=51.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc----------------cccCCCCEEE
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----------------EATQKFPYVI 147 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~----------------~~~~~~D~Vi 147 (272)
+++|.|+|.|++|..++..|.+. ||+|+++++++++.+.+....+.....+. ...+++|+||
T Consensus 3 ~~kI~VIGlG~~G~~~A~~La~~--G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvi 80 (415)
T PRK11064 3 FETISVIGLGYIGLPTAAAFASR--QKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFL 80 (415)
T ss_pred ccEEEEECcchhhHHHHHHHHhC--CCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEE
Confidence 57899999999999999999999 99999999998888765432221111100 1234799999
Q ss_pred EecCCC
Q 024143 148 FCAPPS 153 (272)
Q Consensus 148 ~~a~~~ 153 (272)
.|.+..
T Consensus 81 i~vptp 86 (415)
T PRK11064 81 IAVPTP 86 (415)
T ss_pred EEcCCC
Confidence 999864
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.75 E-value=6.6e-05 Score=66.07 Aligned_cols=70 Identities=16% Similarity=0.213 Sum_probs=53.1
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCC---CeEEEEecCCcchhhhhhC-CceeeccCccccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPG---CQIYGQTMTADHHDELINM-GITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g---~~V~~~~R~~~~~~~l~~~-~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
+|++|.|+|+|.+|+.+++.|.+. | ++|.+.+|++++.+.+... ++.......+...++|+||.|..+..
T Consensus 1 ~mm~I~iIG~G~mG~~la~~l~~~--g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~~~ 74 (267)
T PRK11880 1 MMKKIGFIGGGNMASAIIGGLLAS--GVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKPQV 74 (267)
T ss_pred CCCEEEEEechHHHHHHHHHHHhC--CCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCHHH
Confidence 367999999999999999999998 7 7899999988776665443 54432222235678999999987643
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00035 Score=63.37 Aligned_cols=99 Identities=12% Similarity=0.075 Sum_probs=61.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh--hhhhC--Cceee--ccC---ccccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--ELINM--GITPS--LKW---TEATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~--~l~~~--~i~~~--~~d---~~~~~~~D~Vi~~a~~~ 153 (272)
..||.|||+ |.||+.++..|..+.-..+++.+++.+.+.. .+... ..... ..+ .++++++|+|||+|+..
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~ 97 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVP 97 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCC
Confidence 369999998 9999999999987611348999998762211 12111 11111 123 25789999999999964
Q ss_pred CCC--Ch-------HHHHHHHH--HHhcCCCeEEEEecce
Q 024143 154 RSL--DY-------PGDVRLAA--LSWNGEGSFLFTSSSA 182 (272)
Q Consensus 154 ~~~--~~-------~~~~~~l~--~~~~gvkr~V~~SS~~ 182 (272)
... .. .+.++++. ....+++++|+++|--
T Consensus 98 ~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNP 137 (323)
T PLN00106 98 RKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNP 137 (323)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 431 11 11222332 2456788888888743
|
|
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.73 E-value=5.6e-05 Score=63.19 Aligned_cols=65 Identities=25% Similarity=0.427 Sum_probs=41.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec--------------------cCc-cccCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--------------------KWT-EATQKF 143 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~--------------------~d~-~~~~~~ 143 (272)
|||.|+|.||+|..++..|.+. ||+|++++.++++.+.+.+ |..++. .|. ++...+
T Consensus 1 M~I~ViGlGyvGl~~A~~lA~~--G~~V~g~D~~~~~v~~l~~-g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~a 77 (185)
T PF03721_consen 1 MKIAVIGLGYVGLPLAAALAEK--GHQVIGVDIDEEKVEALNN-GELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDA 77 (185)
T ss_dssp -EEEEE--STTHHHHHHHHHHT--TSEEEEE-S-HHHHHHHHT-TSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-
T ss_pred CEEEEECCCcchHHHHHHHHhC--CCEEEEEeCChHHHHHHhh-ccccccccchhhhhccccccccchhhhhhhhhhhcc
Confidence 6899999999999999999999 9999999999888777653 222111 011 246689
Q ss_pred CEEEEecCC
Q 024143 144 PYVIFCAPP 152 (272)
Q Consensus 144 D~Vi~~a~~ 152 (272)
|++|.|.+.
T Consensus 78 dv~~I~VpT 86 (185)
T PF03721_consen 78 DVVFICVPT 86 (185)
T ss_dssp SEEEE----
T ss_pred ceEEEecCC
Confidence 999999984
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.72 E-value=6.3e-05 Score=63.46 Aligned_cols=69 Identities=14% Similarity=0.143 Sum_probs=49.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC-Ccchhhhhh-CCceeecc-CccccCCCCEEEEecCCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELIN-MGITPSLK-WTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~-~~~~~~l~~-~~i~~~~~-d~~~~~~~D~Vi~~a~~~~ 154 (272)
||++.|+|+|.||+.|+++|.+. ||+|+.-.|+ +++...... .+....-. ..++.+.+|+||.+.+...
T Consensus 1 m~~~~i~GtGniG~alA~~~a~a--g~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a 72 (211)
T COG2085 1 MMIIAIIGTGNIGSALALRLAKA--GHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEA 72 (211)
T ss_pred CcEEEEeccChHHHHHHHHHHhC--CCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHH
Confidence 68999999999999999999999 9999988555 444433221 12221112 2357888999998888643
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=6.9e-05 Score=67.19 Aligned_cols=68 Identities=22% Similarity=0.336 Sum_probs=54.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|++|.|+|.|.+|..+++.|.+. |++|++.+|++++.+.+...++.......++.+++|+||.|.+..
T Consensus 1 m~~Ig~IGlG~mG~~mA~~l~~~--G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~ 68 (296)
T PRK15461 1 MAAIAFIGLGQMGSPMASNLLKQ--GHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNG 68 (296)
T ss_pred CCeEEEEeeCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCH
Confidence 46899999999999999999999 999999999988887776655543322224677899999998764
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00032 Score=63.77 Aligned_cols=69 Identities=12% Similarity=0.095 Sum_probs=46.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcC-----CCCeEEEEecCCcc--hhhhhhCCce---------e-eccCc-cccCCCCE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEH-----PGCQIYGQTMTADH--HDELINMGIT---------P-SLKWT-EATQKFPY 145 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~-----~g~~V~~~~R~~~~--~~~l~~~~i~---------~-~~~d~-~~~~~~D~ 145 (272)
.||+|||+ |+||++++..|.... .+.+|+.+++.+.. .... ...+. . ...+. ++++++|+
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~-~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi 81 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGV-VMELQDCAFPLLKSVVATTDPEEAFKDVDV 81 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccce-eeehhhccccccCCceecCCHHHHhCCCCE
Confidence 48999998 999999999998851 03589999996532 2211 00110 0 11232 57889999
Q ss_pred EEEecCCCC
Q 024143 146 VIFCAPPSR 154 (272)
Q Consensus 146 Vi~~a~~~~ 154 (272)
|||+|+...
T Consensus 82 VI~tAG~~~ 90 (325)
T cd01336 82 AILVGAMPR 90 (325)
T ss_pred EEEeCCcCC
Confidence 999999644
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00025 Score=66.53 Aligned_cols=66 Identities=20% Similarity=0.365 Sum_probs=50.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-------------------C-ceeeccCc-cccCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------------------G-ITPSLKWT-EATQKF 143 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-------------------~-i~~~~~d~-~~~~~~ 143 (272)
|+|.|+|+|++|..++..|.+. ||+|++.++++++.+.+... + +.. ..+. ++++++
T Consensus 1 mkI~vIGlG~~G~~lA~~La~~--G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~-~~~~~~~~~~a 77 (411)
T TIGR03026 1 MKIAVIGLGYVGLPLAALLADL--GHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRA-TTDYEDAIRDA 77 (411)
T ss_pred CEEEEECCCchhHHHHHHHHhc--CCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEE-ECCHHHHHhhC
Confidence 4799999999999999999999 99999999998877665421 1 111 1122 357789
Q ss_pred CEEEEecCCC
Q 024143 144 PYVIFCAPPS 153 (272)
Q Consensus 144 D~Vi~~a~~~ 153 (272)
|+||.|.+..
T Consensus 78 dvvii~vpt~ 87 (411)
T TIGR03026 78 DVIIICVPTP 87 (411)
T ss_pred CEEEEEeCCC
Confidence 9999999854
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0001 Score=65.91 Aligned_cols=68 Identities=15% Similarity=0.253 Sum_probs=53.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
+++|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...++.......+..+++|+||.|.+..
T Consensus 2 ~~~IgviG~G~mG~~~a~~l~~~--g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~ 69 (296)
T PRK11559 2 TMKVGFIGLGIMGKPMSKNLLKA--GYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNS 69 (296)
T ss_pred CceEEEEccCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCH
Confidence 46899999999999999999999 999999999987776665555543221124667899999998753
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00046 Score=59.50 Aligned_cols=92 Identities=15% Similarity=0.191 Sum_probs=62.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--CCceeeccCc---c----c-cCCCCEEEEecCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT---E----A-TQKFPYVIFCAPPSR 154 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--~~i~~~~~d~---~----~-~~~~D~Vi~~a~~~~ 154 (272)
|+++|+|+|.+|+++++.|.++ ||+|+++++++++...... .....+.+|. + + +.++|+++-+-+.+.
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~--g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~ 78 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEE--GHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE 78 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhC--CCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH
Confidence 5899999999999999999999 9999999999888766333 4555555553 2 2 568899977665432
Q ss_pred CCChHHHHHHHHH-HhcCCCeEEEEecce
Q 024143 155 SLDYPGDVRLAAL-SWNGEGSFLFTSSSA 182 (272)
Q Consensus 155 ~~~~~~~~~~l~~-~~~gvkr~V~~SS~~ 182 (272)
..-+...+. +..|++++|--=...
T Consensus 79 ----~N~i~~~la~~~~gv~~viar~~~~ 103 (225)
T COG0569 79 ----VNSVLALLALKEFGVPRVIARARNP 103 (225)
T ss_pred ----HHHHHHHHHHHhcCCCcEEEEecCH
Confidence 122222222 335777766544433
|
|
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00024 Score=64.78 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=50.1
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceee----------------ccCccccCCCCEE
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS----------------LKWTEATQKFPYV 146 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~----------------~~d~~~~~~~D~V 146 (272)
+||||.|+|+|.+|..++..|.+. ||+|++++|++. .+.+...++... ..+.+....+|+|
T Consensus 1 ~~mkI~IiG~G~mG~~~A~~L~~~--G~~V~~~~r~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 77 (341)
T PRK08229 1 MMARICVLGAGSIGCYLGGRLAAA--GADVTLIGRARI-GDELRAHGLTLTDYRGRDVRVPPSAIAFSTDPAALATADLV 77 (341)
T ss_pred CCceEEEECCCHHHHHHHHHHHhc--CCcEEEEecHHH-HHHHHhcCceeecCCCcceecccceeEeccChhhccCCCEE
Confidence 367899999999999999999999 999999999653 233443343221 1122345689999
Q ss_pred EEecCCCC
Q 024143 147 IFCAPPSR 154 (272)
Q Consensus 147 i~~a~~~~ 154 (272)
|.|.....
T Consensus 78 il~vk~~~ 85 (341)
T PRK08229 78 LVTVKSAA 85 (341)
T ss_pred EEEecCcc
Confidence 99987543
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00014 Score=65.60 Aligned_cols=67 Identities=13% Similarity=0.141 Sum_probs=51.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCce------------e-eccCc-cccCCCCEEEEe
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT------------P-SLKWT-EATQKFPYVIFC 149 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~------------~-~~~d~-~~~~~~D~Vi~~ 149 (272)
||||.|+|+|.+|+.++..|.+. |++|++++|++++.+.+...+.. . ...+. +...++|+||.|
T Consensus 1 mmkI~iiG~G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 78 (325)
T PRK00094 1 MMKIAVLGAGSWGTALAIVLARN--GHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVA 78 (325)
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEe
Confidence 67999999999999999999999 99999999987776665543211 0 11122 256789999999
Q ss_pred cCC
Q 024143 150 APP 152 (272)
Q Consensus 150 a~~ 152 (272)
...
T Consensus 79 v~~ 81 (325)
T PRK00094 79 VPS 81 (325)
T ss_pred CCH
Confidence 886
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00014 Score=64.62 Aligned_cols=67 Identities=21% Similarity=0.317 Sum_probs=52.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCcee-eccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-SLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~-~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|+|.|+|+|.+|..++..|.+. |++|++.+|+++..+.....+... ...+.+...++|+||.|.++.
T Consensus 1 m~I~IIG~G~mG~sla~~L~~~--g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~ 68 (279)
T PRK07417 1 MKIGIVGLGLIGGSLGLDLRSL--GHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIG 68 (279)
T ss_pred CeEEEEeecHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHH
Confidence 4799999999999999999999 999999999887766655555321 222234567899999998854
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00019 Score=55.69 Aligned_cols=66 Identities=20% Similarity=0.306 Sum_probs=42.8
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-chhhhhhC-----Cc---eeeccCccccCCCCEEEEecCC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELINM-----GI---TPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-~~~~l~~~-----~i---~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
||.|+|+ |++|+.|++.|.+ ||..++..+..+.. .-..+... +. .....+.+.+.++|+||.|.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~-hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~ 76 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE-HPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPH 76 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-TSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCH
T ss_pred CEEEECCCCHHHHHHHHHHhc-CCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCch
Confidence 6899996 9999999998888 67888776655443 21111111 11 1112234567899999999764
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00041 Score=61.01 Aligned_cols=66 Identities=17% Similarity=0.287 Sum_probs=52.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC----eEEEE-ecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC----QIYGQ-TMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~----~V~~~-~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|||.++|+|.+|+.+++.|++. |+ +|++. +|++++.+.+...++.......+..+++|+||.|..+
T Consensus 1 ~kI~~IG~G~mG~a~a~~L~~~--g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v~~ 71 (266)
T PLN02688 1 FRVGFIGAGKMAEAIARGLVAS--GVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAVKP 71 (266)
T ss_pred CeEEEECCcHHHHHHHHHHHHC--CCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEECc
Confidence 5799999999999999999999 88 88988 8888777666666665433222456789999999954
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0036 Score=53.94 Aligned_cols=135 Identities=13% Similarity=0.096 Sum_probs=78.9
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc--hhhhh---h----CCceee---ccC-cc---------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELI---N----MGITPS---LKW-TE--------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~--~~~l~---~----~~i~~~---~~d-~~--------- 138 (272)
..+++++|||+ +-||..+++.|.++ |++|++..|..+. .+.+. . ..+... ..+ .+
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~ 80 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALARE--GARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAA 80 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence 35678999997 88999999999998 9998888877543 22211 1 112221 122 21
Q ss_pred --ccCCCCEEEEecCCCCC----CC-----hHHHHH-H---------HHHHhcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 139 --ATQKFPYVIFCAPPSRS----LD-----YPGDVR-L---------AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~----~~-----~~~~~~-~---------l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
...+.|++|++|+.... .+ +.+.+. + .+......+++|++||.... .....
T Consensus 81 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~------- 152 (251)
T COG1028 81 EEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG------- 152 (251)
T ss_pred HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC-------
Confidence 23469999999997432 11 111110 0 11000001199999998754 22100
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCcee
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iy 231 (272)
...|+.+|...+.+.+.. + ...+-||.+-
T Consensus 153 -----~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 153 -----QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred -----cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 157999998887655432 3 5678888443
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0031 Score=56.79 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=29.2
Q ss_pred cCCCeEEEEcC---cHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 82 VGENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 82 ~~~~~IlItGa---GfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
+..+++||||+ .-||..+++.|.++ |.+|+. .|.
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~--Ga~Vv~-~~~ 43 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAA--GAEILV-GTW 43 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEE-EeC
Confidence 45678999997 67999999999999 999988 554
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00027 Score=59.76 Aligned_cols=68 Identities=18% Similarity=0.202 Sum_probs=51.2
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-CceeeccCcccc-CCCCEEEEecCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWTEAT-QKFPYVIFCAPP 152 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i~~~~~d~~~~-~~~D~Vi~~a~~ 152 (272)
+..++|+|+|.|.+|+++++.|.+. |++|++.++++++...+... +......+ +.. .++|+++.|+..
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~--G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~-~l~~~~~Dv~vp~A~~ 95 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEE--GAKLIVADINEEAVARAAELFGATVVAPE-EIYSVDADVFAPCALG 95 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHcCCEEEcch-hhccccCCEEEecccc
Confidence 4457899999999999999999999 99999999987766555433 44433222 233 379999988864
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00014 Score=60.22 Aligned_cols=71 Identities=18% Similarity=0.221 Sum_probs=51.1
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
....++|.|+|.|-||+.+++.|..- |.+|++.+|...........++.....+ +.+..+|+|+.+.+.+.
T Consensus 33 ~l~g~tvgIiG~G~IG~~vA~~l~~f--G~~V~~~d~~~~~~~~~~~~~~~~~~l~-ell~~aDiv~~~~plt~ 103 (178)
T PF02826_consen 33 ELRGKTVGIIGYGRIGRAVARRLKAF--GMRVIGYDRSPKPEEGADEFGVEYVSLD-ELLAQADIVSLHLPLTP 103 (178)
T ss_dssp -STTSEEEEESTSHHHHHHHHHHHHT--T-EEEEEESSCHHHHHHHHTTEEESSHH-HHHHH-SEEEE-SSSST
T ss_pred ccCCCEEEEEEEcCCcCeEeeeeecC--CceeEEecccCChhhhcccccceeeehh-hhcchhhhhhhhhcccc
Confidence 34568999999999999999999998 9999999998776543333444333222 56788999998888654
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0001 Score=58.30 Aligned_cols=72 Identities=24% Similarity=0.242 Sum_probs=54.2
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCe-EEEEecCCcchhhhhhC----CceeeccCc--cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELINM----GITPSLKWT--EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~-V~~~~R~~~~~~~l~~~----~i~~~~~d~--~~~~~~D~Vi~~a~~~~ 154 (272)
+..++++|+|+|-.|+.++..|.+. |.+ |+.+.|+.++.+.+... .+.....+. +.+.++|+||++.+...
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~--g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAAL--GAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSGM 87 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHT--TSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTTS
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCCC
Confidence 4557999999999999999999999 886 99999998887766432 233433332 35678999999988654
Q ss_pred C
Q 024143 155 S 155 (272)
Q Consensus 155 ~ 155 (272)
.
T Consensus 88 ~ 88 (135)
T PF01488_consen 88 P 88 (135)
T ss_dssp T
T ss_pred c
Confidence 3
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0012 Score=52.74 Aligned_cols=70 Identities=19% Similarity=0.158 Sum_probs=51.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h----C--CceeeccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N----M--GITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~----~--~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
+||.|+|+ |.+|++++..|....-..+++.+++.+++..... . . .......+.+.++++|+||.+++..
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~ 80 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP 80 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence 58999998 9999999999999833458999999866543211 1 1 1222234456899999999999864
Q ss_pred C
Q 024143 154 R 154 (272)
Q Consensus 154 ~ 154 (272)
.
T Consensus 81 ~ 81 (141)
T PF00056_consen 81 R 81 (141)
T ss_dssp S
T ss_pred c
Confidence 4
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00012 Score=66.62 Aligned_cols=72 Identities=17% Similarity=0.189 Sum_probs=50.4
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|+|||+ |+||+.++++|.++. | .+++.+.|++.+...+...-......+. +.+.++|+|||+++...
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~-gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKT-GVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVVWVASMPK 227 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhC-CCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEEECCcCCc
Confidence 45689999998 999999999998641 3 5899999987766655432100111111 46789999999998644
|
|
| >PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00066 Score=63.97 Aligned_cols=67 Identities=21% Similarity=0.292 Sum_probs=51.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCcee----------------eccCccccCCCCEE
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP----------------SLKWTEATQKFPYV 146 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~----------------~~~d~~~~~~~D~V 146 (272)
.+|||-|+|.|++|..++..| .+ +|+|+++++++++.+.+. .|..+ ...+.+...++|++
T Consensus 5 ~~mkI~vIGlGyvGlpmA~~l-a~--~~~V~g~D~~~~~ve~l~-~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advv 80 (425)
T PRK15182 5 DEVKIAIIGLGYVGLPLAVEF-GK--SRQVVGFDVNKKRILELK-NGVDVNLETTEEELREARYLKFTSEIEKIKECNFY 80 (425)
T ss_pred CCCeEEEECcCcchHHHHHHH-hc--CCEEEEEeCCHHHHHHHH-CcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEE
Confidence 347899999999999999985 55 799999999999888876 34321 11222457899999
Q ss_pred EEecCCC
Q 024143 147 IFCAPPS 153 (272)
Q Consensus 147 i~~a~~~ 153 (272)
|.|.+..
T Consensus 81 ii~Vptp 87 (425)
T PRK15182 81 IITVPTP 87 (425)
T ss_pred EEEcCCC
Confidence 9999854
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00026 Score=63.24 Aligned_cols=70 Identities=17% Similarity=0.321 Sum_probs=53.9
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC-c-cccCCCCEEEEecCC
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW-T-EATQKFPYVIFCAPP 152 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d-~-~~~~~~D~Vi~~a~~ 152 (272)
....++++|+|+|.+|+.+++.|... |.+|++.+|++++.......+......+ . +.+.++|+||++.+.
T Consensus 148 ~l~gk~v~IiG~G~iG~avA~~L~~~--G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~aDiVint~P~ 219 (287)
T TIGR02853 148 TIHGSNVMVLGFGRTGMTIARTFSAL--GARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEIDIVINTIPA 219 (287)
T ss_pred CCCCCEEEEEcChHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccCCEEEECCCh
Confidence 34567999999999999999999999 9999999998776554444455443322 1 457899999998754
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00075 Score=56.00 Aligned_cols=88 Identities=14% Similarity=0.126 Sum_probs=56.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc---c-----------ccCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~---~-----------~~~~~D 144 (272)
|+++|+|+ |++|. +++.|.++ |++|++.+|++++...+.. ..+.....|. + .....|
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~--G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id 77 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEK--GFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFD 77 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHC--cCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence 47899985 98886 99999999 9999999998766554332 1233333332 1 124578
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHhcCCC----eEEEEec
Q 024143 145 YVIFCAPPSRSLDYPGDVRLAALSWNGEG----SFLFTSS 180 (272)
Q Consensus 145 ~Vi~~a~~~~~~~~~~~~~~l~~~~~gvk----r~V~~SS 180 (272)
.+|+.+-.... +.+..+. +..|++ +|+++=.
T Consensus 78 ~lv~~vh~~~~----~~~~~~~-~~~gv~~~~~~~~h~~g 112 (177)
T PRK08309 78 LAVAWIHSSAK----DALSVVC-RELDGSSETYRLFHVLG 112 (177)
T ss_pred EEEEeccccch----hhHHHHH-HHHccCCCCceEEEEeC
Confidence 88877765432 2333332 345677 8988753
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00015 Score=64.77 Aligned_cols=65 Identities=18% Similarity=0.309 Sum_probs=52.5
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
+|.|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+...+........++++++|+||.|.+.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~ 65 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKA--GYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPD 65 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCC
Confidence 488999999999999999999 99999999998887776665554332222467899999999875
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0053 Score=54.41 Aligned_cols=140 Identities=14% Similarity=0.028 Sum_probs=88.3
Q ss_pred CcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----CC-----ceeeccCc-------------
Q 024143 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG-----ITPSLKWT------------- 137 (272)
Q Consensus 81 ~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~~-----i~~~~~d~------------- 137 (272)
.+..+.++|||+ --||+.++++|.+. |.+|+...|++++...... .+ +.....|.
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~--Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKA--GAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence 355678999996 78999999999999 9999999999876544321 11 22333332
Q ss_pred -cc-cCCCCEEEEecCCCCCC----C-----hHHH----HH-HHH---------HHhcCCCeEEEEecceeecCCCCCCC
Q 024143 138 -EA-TQKFPYVIFCAPPSRSL----D-----YPGD----VR-LAA---------LSWNGEGSFLFTSSSAIYDCSDNGAC 192 (272)
Q Consensus 138 -~~-~~~~D~Vi~~a~~~~~~----~-----~~~~----~~-~l~---------~~~~gvkr~V~~SS~~vYg~~~~~~~ 192 (272)
+. ..+.|++|++|+..... + |... ++ ..+ ..+.+-..++++||..-+....
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~---- 158 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGP---- 158 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC----
Confidence 12 45799999999864321 1 2111 11 000 1233456788888876443210
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHcC---------eeEEeeCceecCC
Q 024143 193 DEDSPVVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKAD 234 (272)
Q Consensus 193 ~E~~p~~p~~~~~y~~sk~~aE~~l~~~~---------~~IlRp~~iyG~~ 234 (272)
.+. ..|+.+|...+++.+... +-.+-|+.+..+.
T Consensus 159 ------~~~--~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 159 ------GSG--VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred ------CCc--ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 110 379999999999887642 3456787776653
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0016 Score=58.71 Aligned_cols=68 Identities=12% Similarity=0.130 Sum_probs=50.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCC--CeEEEEecCCcchhhhhh----------CCceeeccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELIN----------MGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g--~~V~~~~R~~~~~~~l~~----------~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
+||.|+|+|.+|+.++..|... | ++|+.++|++++...+.. ........+.+.+.++|+||.+++.
T Consensus 1 ~kI~IIGaG~vG~~~a~~l~~~--g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~ 78 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQ--GIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGA 78 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCC
Confidence 3799999999999999999998 7 689999998776543321 0111222333567899999999986
Q ss_pred CC
Q 024143 153 SR 154 (272)
Q Consensus 153 ~~ 154 (272)
..
T Consensus 79 ~~ 80 (306)
T cd05291 79 PQ 80 (306)
T ss_pred CC
Confidence 43
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00089 Score=61.55 Aligned_cols=67 Identities=16% Similarity=0.249 Sum_probs=52.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec--------------------cCc-cccCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--------------------KWT-EATQKF 143 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~--------------------~d~-~~~~~~ 143 (272)
|||-|+|+||+|-..+-.|.+. ||+|++++.++.+.+.+.+ |..++. .|. ++.+..
T Consensus 1 MkI~viGtGYVGLv~g~~lA~~--GHeVv~vDid~~KV~~ln~-g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~a 77 (414)
T COG1004 1 MKITVIGTGYVGLVTGACLAEL--GHEVVCVDIDESKVELLNK-GISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDA 77 (414)
T ss_pred CceEEECCchHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHhC-CCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcC
Confidence 6899999999999999999999 9999999999988877653 222211 111 257799
Q ss_pred CEEEEecCCCC
Q 024143 144 PYVIFCAPPSR 154 (272)
Q Consensus 144 D~Vi~~a~~~~ 154 (272)
|++|.|.+...
T Consensus 78 dv~fIavgTP~ 88 (414)
T COG1004 78 DVVFIAVGTPP 88 (414)
T ss_pred CEEEEEcCCCC
Confidence 99999998543
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0004 Score=62.33 Aligned_cols=70 Identities=19% Similarity=0.302 Sum_probs=54.3
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC-c-cccCCCCEEEEecCC
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW-T-EATQKFPYVIFCAPP 152 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d-~-~~~~~~D~Vi~~a~~ 152 (272)
....++++|+|+|.+|+.+++.|... |.+|++.+|++.+.......+......+ . +.+.++|+||++.+.
T Consensus 149 ~l~g~kvlViG~G~iG~~~a~~L~~~--Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~aDiVI~t~p~ 220 (296)
T PRK08306 149 TIHGSNVLVLGFGRTGMTLARTLKAL--GANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKIDIIFNTIPA 220 (296)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCCCEEEECCCh
Confidence 34557999999999999999999999 9999999999776555555565544322 1 457899999998753
|
|
| >PRK12491 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00025 Score=62.84 Aligned_cols=68 Identities=16% Similarity=0.221 Sum_probs=52.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC----eEEEEecCCcchhhhhh-CCceeeccCccccCCCCEEEEecCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC----QIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~----~V~~~~R~~~~~~~l~~-~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
+||.++|+|.+|..+++.|++. |+ +|++.+|++++.+.+.. .++.......+...++|+||.|..|..
T Consensus 3 ~~IgfIG~G~MG~aia~~L~~~--g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavkP~~ 75 (272)
T PRK12491 3 KQIGFIGCGNMGIAMIGGMINK--NIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIKPDL 75 (272)
T ss_pred CeEEEECccHHHHHHHHHHHHC--CCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeChHH
Confidence 5899999999999999999988 64 79999998877766653 565443222245678999999998743
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00048 Score=61.83 Aligned_cols=67 Identities=22% Similarity=0.337 Sum_probs=51.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccC---CCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQ---KFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~---~~D~Vi~~a~~~ 153 (272)
|+|.|+|.|.+|..+++.|.+. |++|++.+|++++.+.+...+........+..+ .+|+||.|.+..
T Consensus 1 m~Ig~IGlG~mG~~mA~~L~~~--g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~ 70 (299)
T PRK12490 1 MKLGLIGLGKMGGNMAERLRED--GHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAG 70 (299)
T ss_pred CEEEEEcccHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCc
Confidence 3799999999999999999999 999999999988877766556543321113333 369999988864
|
|
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.001 Score=63.47 Aligned_cols=69 Identities=9% Similarity=0.046 Sum_probs=51.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceee------------------ccCc-cccCCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS------------------LKWT-EATQKFP 144 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~------------------~~d~-~~~~~~D 144 (272)
||+|.|+|+|++|..++-.|.+...|++|++++.++++.+.+........ ..|. +++.++|
T Consensus 1 ~m~I~ViG~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~ad 80 (473)
T PLN02353 1 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEAD 80 (473)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcCC
Confidence 57999999999999999999987224889999999888777653221110 1111 2567899
Q ss_pred EEEEecCC
Q 024143 145 YVIFCAPP 152 (272)
Q Consensus 145 ~Vi~~a~~ 152 (272)
++|.|.+.
T Consensus 81 vi~I~V~T 88 (473)
T PLN02353 81 IVFVSVNT 88 (473)
T ss_pred EEEEEeCC
Confidence 99999973
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00017 Score=56.48 Aligned_cols=70 Identities=17% Similarity=0.294 Sum_probs=42.5
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEe-cCCcchhhhhhC-CceeeccCccccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDELINM-GITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~-R~~~~~~~l~~~-~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
...+||-|+|+|.+|.+|++.|.+. ||+|.++. |+....+..... +-.......+....+|++|.+.+..
T Consensus 8 ~~~l~I~iIGaGrVG~~La~aL~~a--g~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd 79 (127)
T PF10727_consen 8 AARLKIGIIGAGRVGTALARALARA--GHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD 79 (127)
T ss_dssp ----EEEEECTSCCCCHHHHHHHHT--TSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC
T ss_pred CCccEEEEECCCHHHHHHHHHHHHC--CCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH
Confidence 3457999999999999999999999 99999874 554444433221 1111111125678999999888753
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00046 Score=61.62 Aligned_cols=68 Identities=19% Similarity=0.221 Sum_probs=50.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCcee---------e-ccCccccCCCCEEEEecCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP---------S-LKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~---------~-~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
|+|.|+|+|.+|..++..|.+. |++|+.++|++++.+.+...++.. . ..+.+....+|+||.+.....
T Consensus 1 m~I~IiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vila~k~~~ 78 (304)
T PRK06522 1 MKIAILGAGAIGGLFGAALAQA--GHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAELGPQDLVILAVKAYQ 78 (304)
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHcCCCCEEEEeccccc
Confidence 4799999999999999999999 999999999777666655445422 0 111222378999999987543
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00096 Score=59.58 Aligned_cols=67 Identities=16% Similarity=0.105 Sum_probs=49.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhh-----------hhhCCce-e-----------eccCcccc
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-----------LINMGIT-P-----------SLKWTEAT 140 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~-----------l~~~~i~-~-----------~~~d~~~~ 140 (272)
+++|.|+|+|.+|+.++..|... |++|+..+++++..+. +...+.. . ...|.+.+
T Consensus 5 ~~~V~ViGaG~mG~~iA~~~a~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 82 (286)
T PRK07819 5 IQRVGVVGAGQMGAGIAEVCARA--GVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDLGDF 82 (286)
T ss_pred ccEEEEEcccHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCHHHh
Confidence 46899999999999999999999 9999999999876544 2222210 0 11233457
Q ss_pred CCCCEEEEecCC
Q 024143 141 QKFPYVIFCAPP 152 (272)
Q Consensus 141 ~~~D~Vi~~a~~ 152 (272)
+++|+||-|+..
T Consensus 83 ~~~d~ViEav~E 94 (286)
T PRK07819 83 ADRQLVIEAVVE 94 (286)
T ss_pred CCCCEEEEeccc
Confidence 899999999864
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00032 Score=65.12 Aligned_cols=66 Identities=18% Similarity=0.252 Sum_probs=47.6
Q ss_pred EEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhh----CCceeeccCc-------cccCCCCEEEEecCCC
Q 024143 87 LLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN----MGITPSLKWT-------EATQKFPYVIFCAPPS 153 (272)
Q Consensus 87 IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~----~~i~~~~~d~-------~~~~~~D~Vi~~a~~~ 153 (272)
|+|+|+|++|+.+++.|.+.. .+ +|++.+|+.++.+.+.. ..++....|. +.++++|+||+|+++.
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~-~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRG-PFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTT-CE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred CEEEcCcHHHHHHHHHHhcCC-CCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence 688999999999999999882 24 89999999888766643 2455554442 2578999999999875
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK08507 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00066 Score=60.15 Aligned_cols=68 Identities=18% Similarity=0.374 Sum_probs=49.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
+||.|+|+|.+|+.+++.|.+. |+ +|++.+|++++.+.....++.....+.+...++|+||.|.++..
T Consensus 1 m~I~iIG~G~mG~sla~~l~~~--g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aD~Vilavp~~~ 70 (275)
T PRK08507 1 MKIGIIGLGLMGGSLGLALKEK--GLISKVYGYDHNELHLKKALELGLVDEIVSFEELKKCDVIFLAIPVDA 70 (275)
T ss_pred CEEEEEccCHHHHHHHHHHHhc--CCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHHHhcCCEEEEeCcHHH
Confidence 3799999999999999999998 75 78888998777665555554211223222335999999998643
|
|
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0014 Score=60.98 Aligned_cols=66 Identities=18% Similarity=0.177 Sum_probs=47.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC----------------Cceeec-cCc-cccCCCCEE
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----------------GITPSL-KWT-EATQKFPYV 146 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~----------------~i~~~~-~d~-~~~~~~D~V 146 (272)
|||.|+|+|++|..++. ++.. ||+|+++++++++.+.+.+. +..... .+. ++..++|+|
T Consensus 1 mkI~VIGlGyvGl~~A~-~lA~--G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~v 77 (388)
T PRK15057 1 MKITISGTGYVGLSNGL-LIAQ--NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYV 77 (388)
T ss_pred CEEEEECCCHHHHHHHH-HHHh--CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEE
Confidence 37999999999999995 5567 99999999998887766531 111111 111 346789999
Q ss_pred EEecCCC
Q 024143 147 IFCAPPS 153 (272)
Q Consensus 147 i~~a~~~ 153 (272)
|-|.+..
T Consensus 78 ii~Vpt~ 84 (388)
T PRK15057 78 IIATPTD 84 (388)
T ss_pred EEeCCCC
Confidence 9999854
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00035 Score=62.07 Aligned_cols=67 Identities=21% Similarity=0.269 Sum_probs=56.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
+||-++|.|-.|..+++.|+++ ||+|++.+|++++ .+.+...|........++..++|+||-|.+..
T Consensus 1 ~kIafIGLG~MG~pmA~~L~~a--G~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~ 68 (286)
T COG2084 1 MKIAFIGLGIMGSPMAANLLKA--GHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDD 68 (286)
T ss_pred CeEEEEcCchhhHHHHHHHHHC--CCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCH
Confidence 4789999999999999999999 9999999999988 55555557766544446788999999999864
|
|
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0012 Score=58.76 Aligned_cols=68 Identities=18% Similarity=0.221 Sum_probs=49.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchh-----------hhhhCCc-e----------e-eccCcccc
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----------ELINMGI-T----------P-SLKWTEAT 140 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~-----------~l~~~~i-~----------~-~~~d~~~~ 140 (272)
|+||.|+|+|.+|..++..|.+. |++|++++++++..+ .+...+. . . ...|.+.+
T Consensus 3 ~~kI~VIG~G~mG~~ia~~la~~--g~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 80 (282)
T PRK05808 3 IQKIGVIGAGTMGNGIAQVCAVA--GYDVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGTTDLDDL 80 (282)
T ss_pred ccEEEEEccCHHHHHHHHHHHHC--CCceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHHHh
Confidence 56899999999999999999999 999999999876653 1222221 1 0 11233457
Q ss_pred CCCCEEEEecCCC
Q 024143 141 QKFPYVIFCAPPS 153 (272)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (272)
.++|+||-|+...
T Consensus 81 ~~aDlVi~av~e~ 93 (282)
T PRK05808 81 KDADLVIEAATEN 93 (282)
T ss_pred ccCCeeeeccccc
Confidence 8899999998764
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0023 Score=55.15 Aligned_cols=158 Identities=16% Similarity=0.031 Sum_probs=92.8
Q ss_pred cHHHHHHHHHHHhcCCCCeEEEEecCCcc----hhhhhh-CCceeeccCc--------------ccc-CCCCEEEEecCC
Q 024143 93 GVLGRLVAEQWRQEHPGCQIYGQTMTADH----HDELIN-MGITPSLKWT--------------EAT-QKFPYVIFCAPP 152 (272)
Q Consensus 93 GfiG~~l~~~L~~~~~g~~V~~~~R~~~~----~~~l~~-~~i~~~~~d~--------------~~~-~~~D~Vi~~a~~ 152 (272)
+-||+.++++|.++ |++|++++|+.++ ...+.. .+.+.+..|. +.. ..+|++||+++.
T Consensus 6 ~GiG~aia~~l~~~--Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~ 83 (241)
T PF13561_consen 6 SGIGRAIARALAEE--GANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGI 83 (241)
T ss_dssp SHHHHHHHHHHHHT--TEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEES
T ss_pred CChHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccc
Confidence 67999999999999 9999999999776 233322 3444444443 134 789999999976
Q ss_pred CCC----CCh----HHHHHHH---------------HHHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHH
Q 024143 153 SRS----LDY----PGDVRLA---------------ALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (272)
Q Consensus 153 ~~~----~~~----~~~~~~l---------------~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~s 209 (272)
... .++ .+.+... ......-.++|++||...... . |. ...|+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~-----------~-~~-~~~y~~s 150 (241)
T PF13561_consen 84 SPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP-----------M-PG-YSAYSAS 150 (241)
T ss_dssp CTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB-----------S-TT-THHHHHH
T ss_pred cccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc-----------C-cc-chhhHHH
Confidence 442 221 1111111 001112368999998753211 0 11 1489999
Q ss_pred HHHHHHHHHHc--------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 210 LLKAEKVILEF--------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 210 k~~aE~~l~~~--------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|...|.+.+.. + +-.+.||.+..+.... +..++.+..+. ..+...+|+|.+++..+
T Consensus 151 Kaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl------~r~~~~~evA~~v~fL~ 222 (241)
T PF13561_consen 151 KAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPL------GRLGTPEEVANAVLFLA 222 (241)
T ss_dssp HHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTT------SSHBEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhcc------CCCcCHHHHHHHHHHHh
Confidence 99999877653 3 4567888876432111 11111211221 12467899999877544
|
... |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00054 Score=54.94 Aligned_cols=70 Identities=21% Similarity=0.181 Sum_probs=51.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhhC-Cc---eeeccCc-cccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINM-GI---TPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~~-~i---~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
..++|+|+|+|.+|+.+++.|.+. | ++|++.+|++++...+... +. .....+. +...++|+||.|.++..
T Consensus 18 ~~~~i~iiG~G~~g~~~a~~l~~~--g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvi~~~~~~~ 93 (155)
T cd01065 18 KGKKVLILGAGGAARAVAYALAEL--GAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLAEADLIINTTPVGM 93 (155)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccccCCEEEeCcCCCC
Confidence 347899999999999999999988 6 7899999987766544321 22 1122232 34689999999998765
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0012 Score=58.83 Aligned_cols=67 Identities=22% Similarity=0.255 Sum_probs=49.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-------CCce---------------e-eccCc-cc
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGIT---------------P-SLKWT-EA 139 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-------~~i~---------------~-~~~d~-~~ 139 (272)
+++|.|+|+|.+|+.++..|.+. |++|++.++++++.+.+.. .+++ . ...+. ++
T Consensus 1 ~~~V~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 78 (288)
T PRK09260 1 IEKLVVVGAGVMGRGIAYVFAVS--GFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAA 78 (288)
T ss_pred CcEEEEECccHHHHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHh
Confidence 36899999999999999999999 9999999998776654321 1110 0 11122 46
Q ss_pred cCCCCEEEEecCC
Q 024143 140 TQKFPYVIFCAPP 152 (272)
Q Consensus 140 ~~~~D~Vi~~a~~ 152 (272)
++++|+||-|.+.
T Consensus 79 ~~~aD~Vi~avpe 91 (288)
T PRK09260 79 VADADLVIEAVPE 91 (288)
T ss_pred hcCCCEEEEeccC
Confidence 7899999999875
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0011 Score=59.67 Aligned_cols=67 Identities=19% Similarity=0.250 Sum_probs=51.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccC---CCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQ---KFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~---~~D~Vi~~a~~~ 153 (272)
|+|.|+|.|.+|+.+++.|++. |++|++.+|++++.+.+...++.......+..+ ++|+||.+.+..
T Consensus 1 m~Ig~IGlG~MG~~mA~~L~~~--g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~ 70 (301)
T PRK09599 1 MQLGMIGLGRMGGNMARRLLRG--GHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAG 70 (301)
T ss_pred CEEEEEcccHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCC
Confidence 3799999999999999999999 999999999988887776666554321112233 479999888764
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00046 Score=62.99 Aligned_cols=68 Identities=16% Similarity=0.149 Sum_probs=42.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhc-CCCCeEEEEecCCcchhhhhhCCceeeccCc--cccCCCCEEEEecC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTMTADHHDELINMGITPSLKWT--EATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~-~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~--~~~~~~D~Vi~~a~ 151 (272)
|+||+|+|+ |++|+.|++.|.++ ||..+++++.+....-+.+.-.+.+....|. ..+.++|+||.|++
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~~~~~vDvVf~A~g 72 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTFDFSGVDIALFSAG 72 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHHHHcCCCEEEECCC
Confidence 568999997 99999999999887 2333568887764433222211222222222 23457777777765
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00056 Score=62.16 Aligned_cols=68 Identities=15% Similarity=0.183 Sum_probs=50.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC--------Cce----ee-ccCc-cccCCCCEEEEe
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--------GIT----PS-LKWT-EATQKFPYVIFC 149 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~--------~i~----~~-~~d~-~~~~~~D~Vi~~ 149 (272)
+|+|.|+|+|-+|..++..|.+. |++|++.+|++++.+.+... +.. .. ..+. ++.+.+|+||.|
T Consensus 4 ~m~I~iIG~G~mG~~ia~~L~~~--G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 4 GMRVAVLGAGAWGTALAVLAASK--GVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVA 81 (328)
T ss_pred CCeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEE
Confidence 46899999999999999999999 99999999987766555432 211 11 1122 356789999988
Q ss_pred cCCC
Q 024143 150 APPS 153 (272)
Q Consensus 150 a~~~ 153 (272)
....
T Consensus 82 v~~~ 85 (328)
T PRK14618 82 VPSK 85 (328)
T ss_pred CchH
Confidence 8764
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0013 Score=59.12 Aligned_cols=66 Identities=15% Similarity=0.141 Sum_probs=52.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc----cccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~----~~~~~~D~Vi~~a~~~ 153 (272)
|+|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...+.... .+. +.+..+|+||.|.+..
T Consensus 1 M~Ig~IGlG~mG~~la~~L~~~--g~~V~~~dr~~~~~~~l~~~g~~~~-~s~~~~~~~~~~~dvIi~~vp~~ 70 (298)
T TIGR00872 1 MQLGLIGLGRMGANIVRRLAKR--GHDCVGYDHDQDAVKAMKEDRTTGV-ANLRELSQRLSAPRVVWVMVPHG 70 (298)
T ss_pred CEEEEEcchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCccc-CCHHHHHhhcCCCCEEEEEcCch
Confidence 4799999999999999999999 9999999999988877766554332 121 2346789999998764
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0014 Score=58.18 Aligned_cols=68 Identities=13% Similarity=0.207 Sum_probs=50.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCC----CeEEEEecCCc-chhhhhh-CCceeeccCccccCCCCEEEEecCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTAD-HHDELIN-MGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g----~~V~~~~R~~~-~~~~l~~-~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
|||.|+|+|.+|+.+++.|++. | ++|++.+|++. +.+.+.. .++.......+..+++|+||.|..+..
T Consensus 4 mkI~~IG~G~mG~aia~~l~~~--g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p~~ 77 (279)
T PRK07679 4 QNISFLGAGSIAEAIIGGLLHA--NVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKPKD 77 (279)
T ss_pred CEEEEECccHHHHHHHHHHHHC--CCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCHHH
Confidence 5899999999999999999998 6 78999998753 4454433 355433222245678999999998754
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0085 Score=53.57 Aligned_cols=130 Identities=18% Similarity=0.221 Sum_probs=78.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCC----ceeeccC---cc-----------c--cCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG----ITPSLKW---TE-----------A--TQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~----i~~~~~d---~~-----------~--~~~ 142 (272)
.+-|||||| --+|..++++|.++ |+.|.+-.-.++..+.+...- ......| ++ . -.+
T Consensus 29 ~k~VlITGCDSGfG~~LA~~L~~~--Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 29 DKAVLITGCDSGFGRLLAKKLDKK--GFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred CcEEEEecCCcHHHHHHHHHHHhc--CCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 356999998 77899999999999 999998876655544443211 1222222 11 0 124
Q ss_pred CCEEEEecCCCC---CCCh--HHHHHHHH----------------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSR---SLDY--PGDVRLAA----------------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~---~~~~--~~~~~~l~----------------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
-=.|||+|+... ..++ .++.++.+ .-+..-.|+|++||.. |... .|.
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~--GR~~----------~p~ 174 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVL--GRVA----------LPA 174 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccc--cCcc----------Ccc
Confidence 568899998432 2221 12221111 1123356999999976 3211 111
Q ss_pred CCChHHHHHHHHHHH-------HHHcC--eeEEeeC
Q 024143 202 GRSPRTDVLLKAEKV-------ILEFG--GCVLRLA 228 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~-------l~~~~--~~IlRp~ 228 (272)
..+|+.||.+.|.. ++.+| +.|+-||
T Consensus 175 -~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG 209 (322)
T KOG1610|consen 175 -LGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG 209 (322)
T ss_pred -cccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC
Confidence 25788999988854 34456 6888888
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00075 Score=63.77 Aligned_cols=66 Identities=18% Similarity=0.254 Sum_probs=53.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc-------cc-cCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT-------EA-TQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~-------~~-~~~~D~Vi~~a~~ 152 (272)
|+|+|+|+|.+|+++++.|.++ |++|+++++++++.+.+.. .+++.+.+|. ++ +.++|.||.+...
T Consensus 1 m~viIiG~G~ig~~~a~~L~~~--g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~ 75 (453)
T PRK09496 1 MKIIIVGAGQVGYTLAENLSGE--NNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDS 75 (453)
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCC
Confidence 4899999999999999999999 9999999999888777654 5667766653 12 5689998887654
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00065 Score=58.69 Aligned_cols=64 Identities=16% Similarity=0.124 Sum_probs=43.5
Q ss_pred EEEc-C-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---------cccCCCCEEEEecCCCC
Q 024143 88 LIVG-P-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---------EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 88 lItG-a-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---------~~~~~~D~Vi~~a~~~~ 154 (272)
+|++ + |++|++|+++|+++ |++|+++.|...... ....+++.+..+. +.+.++|+|||+|+...
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~--G~~V~li~r~~~~~~-~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd 93 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAA--GHEVTLVTTKTAVKP-EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD 93 (229)
T ss_pred eecCccchHHHHHHHHHHHhC--CCEEEEEECcccccC-CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence 5665 5 99999999999999 999999987643211 0112333322111 23568999999999754
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.002 Score=59.79 Aligned_cols=96 Identities=13% Similarity=0.063 Sum_probs=59.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCc-----e---eeccCccccCCCCEEEEecCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI-----T---PSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i-----~---~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
+++||.|+|+ |++|+.|++.|.++ |.++|+.+.+....-+.+..... + ....+.+.++++|+||.+.+..
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~h-P~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~ 115 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANH-PDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHG 115 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhC-CCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHH
Confidence 5579999997 99999999977666 78899999875433222211110 0 0011112357899999988653
Q ss_pred CCCChHHHHHHHHHHhcCCCeEEEEecceeecC
Q 024143 154 RSLDYPGDVRLAALSWNGEGSFLFTSSSAIYDC 186 (272)
Q Consensus 154 ~~~~~~~~~~~l~~~~~gvkr~V~~SS~~vYg~ 186 (272)
. ...+...+ ..| +++|-+|+..-+.+
T Consensus 116 ~----s~~i~~~~--~~g-~~VIDlSs~fRl~~ 141 (381)
T PLN02968 116 T----TQEIIKAL--PKD-LKIVDLSADFRLRD 141 (381)
T ss_pred H----HHHHHHHH--hCC-CEEEEcCchhccCC
Confidence 1 12222222 233 78999999887654
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00048 Score=58.97 Aligned_cols=68 Identities=19% Similarity=0.222 Sum_probs=49.9
Q ss_pred CeEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC--------Cce--eeccC-ccccCCCCEEEEecCC
Q 024143 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--------GIT--PSLKW-TEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~--------~i~--~~~~d-~~~~~~~D~Vi~~a~~ 152 (272)
|||.|+| +|.+|+.+++.|.+. |++|+..+|++++...+... ++. ....+ .++...+|+||.+..+
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~--G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~ 78 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKA--GNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPW 78 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC--CCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCH
Confidence 4799997 799999999999999 99999999988776544321 111 11122 2467789999999886
Q ss_pred CC
Q 024143 153 SR 154 (272)
Q Consensus 153 ~~ 154 (272)
..
T Consensus 79 ~~ 80 (219)
T TIGR01915 79 DH 80 (219)
T ss_pred HH
Confidence 53
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00072 Score=60.86 Aligned_cols=68 Identities=24% Similarity=0.433 Sum_probs=51.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCC--CeEEEEecCCcchhhhhhCCceeec-cCc-cccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELINMGITPSL-KWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g--~~V~~~~R~~~~~~~l~~~~i~~~~-~d~-~~~~~~D~Vi~~a~~~ 153 (272)
+++|.|+|+|.+|..+++.|.+. | ++|++.+|++++.+.....++.... .+. +.+.++|+||.|+++.
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~--g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~ 77 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRL--GLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVG 77 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHH
Confidence 36899999999999999999998 7 4899999988776655555532211 222 3577899999999863
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0021 Score=57.81 Aligned_cols=68 Identities=19% Similarity=0.250 Sum_probs=50.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-----Cc------e-------eeccCc-cccCCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----GI------T-------PSLKWT-EATQKFP 144 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-----~i------~-------~~~~d~-~~~~~~D 144 (272)
+++|.|+|+|.+|+.++..|.+. |++|+++++++++.+.+... +. . ....|. ++++++|
T Consensus 4 ~~~I~vIGaG~mG~~iA~~l~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aD 81 (311)
T PRK06130 4 IQNLAIIGAGTMGSGIAALFARK--GLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGAD 81 (311)
T ss_pred ccEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCC
Confidence 46899999999999999999999 99999999987665443320 10 0 011222 3578999
Q ss_pred EEEEecCCC
Q 024143 145 YVIFCAPPS 153 (272)
Q Consensus 145 ~Vi~~a~~~ 153 (272)
+||.|..+.
T Consensus 82 lVi~av~~~ 90 (311)
T PRK06130 82 LVIEAVPEK 90 (311)
T ss_pred EEEEeccCc
Confidence 999998764
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0015 Score=53.68 Aligned_cols=37 Identities=14% Similarity=0.192 Sum_probs=32.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~ 122 (272)
.+.++|||+ |.||+.+++.|.++ |++|+.++|+.+..
T Consensus 16 gk~~lVTGa~~GIG~aia~~l~~~--G~~V~l~~r~~~~~ 53 (169)
T PRK06720 16 GKVAIVTGGGIGIGRNTALLLAKQ--GAKVIVTDIDQESG 53 (169)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEECCHHHH
Confidence 467999997 89999999999999 99999999876544
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0042 Score=56.20 Aligned_cols=97 Identities=12% Similarity=0.052 Sum_probs=58.8
Q ss_pred CeEEEEcC-cHHHHHHHHHHHh-cCCCCeEEEEecCCcch---hhhhhCC-ceeec---c-C-ccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQ-EHPGCQIYGQTMTADHH---DELINMG-ITPSL---K-W-TEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~-~~~g~~V~~~~R~~~~~---~~l~~~~-i~~~~---~-d-~~~~~~~D~Vi~~a~~~ 153 (272)
|||+|+|+ |.+|++++..|.. ..-+++++.++|++... -.+...+ ...+. . | .+.++++|+||.|++..
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~~ 80 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGVA 80 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCCC
Confidence 58999998 9999999988854 21157888888875431 1222211 11111 2 3 25788999999999974
Q ss_pred CCCC-----h-HH---HHHHHH--HHhcCCCeEEEEecc
Q 024143 154 RSLD-----Y-PG---DVRLAA--LSWNGEGSFLFTSSS 181 (272)
Q Consensus 154 ~~~~-----~-~~---~~~~l~--~~~~gvkr~V~~SS~ 181 (272)
.... . .. .+++++ ....+++++|.+.|-
T Consensus 81 ~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN 119 (312)
T PRK05086 81 RKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN 119 (312)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 4321 1 11 223333 234577888877763
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0012 Score=50.19 Aligned_cols=63 Identities=22% Similarity=0.321 Sum_probs=52.3
Q ss_pred EEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCcc--------ccCCCCEEEEecC
Q 024143 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE--------ATQKFPYVIFCAP 151 (272)
Q Consensus 87 IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~--------~~~~~D~Vi~~a~ 151 (272)
|+|.|.|.+|..+++.|.+. +.+|++++++++....+...++..+.+|.. .+++++.||-+..
T Consensus 1 vvI~G~g~~~~~i~~~L~~~--~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEG--GIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHT--TSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEcCCHHHHHHHHHHHhC--CCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence 68899999999999999998 889999999999988888888888887751 3568898887766
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00078 Score=53.16 Aligned_cols=65 Identities=14% Similarity=0.238 Sum_probs=52.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-----cccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----EATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-----~~~~~~D~Vi~~a~~ 152 (272)
++|+++|+| .|.+++..|.+. |++|++++.++...+.....+++.+..|. +.-+++|.|+-+=++
T Consensus 18 ~kileIG~G-fG~~vA~~L~~~--G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirpp 87 (134)
T PRK04148 18 KKIVELGIG-FYFKVAKKLKES--GFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRPP 87 (134)
T ss_pred CEEEEEEec-CCHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCCC
Confidence 689999999 899999999999 99999999999887776666776666553 234688888766554
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.003 Score=57.34 Aligned_cols=143 Identities=9% Similarity=0.065 Sum_probs=80.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCC-------eEEEEecCCcc--hh----hhhhC------CceeeccCccccCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTADH--HD----ELINM------GITPSLKWTEATQKFP 144 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~-------~V~~~~R~~~~--~~----~l~~~------~i~~~~~d~~~~~~~D 144 (272)
+||.|+|+ |.+|..++..|... +. ++..+++.+.. .. .+... .+.....+.+.++++|
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~--~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD 80 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASG--EMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDAD 80 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhc--cccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCC
Confidence 58999998 99999999999877 65 78888884332 21 11111 1222223446799999
Q ss_pred EEEEecCCCCCC--C---hHHH----HHHHHH--HhcC--CCeEEEEecceeecCCCCCCCCCCCC-CCCCCCChHHHHH
Q 024143 145 YVIFCAPPSRSL--D---YPGD----VRLAAL--SWNG--EGSFLFTSSSAIYDCSDNGACDEDSP-VVPIGRSPRTDVL 210 (272)
Q Consensus 145 ~Vi~~a~~~~~~--~---~~~~----~~~l~~--~~~g--vkr~V~~SS~~vYg~~~~~~~~E~~p-~~p~~~~~y~~sk 210 (272)
+||.+|+..... . ..+. ++.+.. ...+ -..+|.+|.-- +-. .....+.++ +.+. ..||.++
T Consensus 81 ivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPv--D~~-t~~~~k~sg~~p~~--~ViG~t~ 155 (322)
T cd01338 81 WALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPC--NTN-ALIAMKNAPDIPPD--NFTAMTR 155 (322)
T ss_pred EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcH--HHH-HHHHHHHcCCCChH--heEEehH
Confidence 999999864422 1 1111 122221 2233 33455555211 000 000111221 2232 4667788
Q ss_pred HHHHHHHHHc----C--eeEEeeCceecCC
Q 024143 211 LKAEKVILEF----G--GCVLRLAGLYKAD 234 (272)
Q Consensus 211 ~~aE~~l~~~----~--~~IlRp~~iyG~~ 234 (272)
+..+++.... + ...+|..+|||+.
T Consensus 156 LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH 185 (322)
T cd01338 156 LDHNRAKSQLAKKAGVPVTDVKNMVIWGNH 185 (322)
T ss_pred HHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence 8888776544 3 5668888889985
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK07680 late competence protein ComER; Validated | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0012 Score=58.37 Aligned_cols=67 Identities=18% Similarity=0.331 Sum_probs=49.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCC----CeEEEEecCCcchhhhhhC--CceeeccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTADHHDELINM--GITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g----~~V~~~~R~~~~~~~l~~~--~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|+|.|+|+|.+|+.+++.|.+. | .+|.+.+|++++...+... ++.......+...++|+||.|..+.
T Consensus 1 m~I~iIG~G~mG~ala~~L~~~--g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~p~ 73 (273)
T PRK07680 1 MNIGFIGTGNMGTILIEAFLES--GAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVKPL 73 (273)
T ss_pred CEEEEECccHHHHHHHHHHHHC--CCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecCHH
Confidence 3799999999999999999998 7 3799999987766555432 4443322223567899999999653
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0034 Score=59.36 Aligned_cols=97 Identities=14% Similarity=0.103 Sum_probs=65.4
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC--CceeeccCc---c-----ccCCCCEEEEecC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSLKWT---E-----ATQKFPYVIFCAP 151 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~--~i~~~~~d~---~-----~~~~~D~Vi~~a~ 151 (272)
..+++|+|+|+|.+|+.+++.|.+. |++|+++++++++.+.+... ++..+.+|. + .++++|.||-+..
T Consensus 229 ~~~~~iiIiG~G~~g~~l~~~L~~~--~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~ 306 (453)
T PRK09496 229 KPVKRVMIVGGGNIGYYLAKLLEKE--GYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTN 306 (453)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCC
Confidence 3468999999999999999999999 99999999998877766543 455666664 1 3568899876554
Q ss_pred CCCCCChHHHHHHHHHHhcCCCeEEEEecceee
Q 024143 152 PSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIY 184 (272)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~~gvkr~V~~SS~~vY 184 (272)
... ......++....++++++.......|
T Consensus 307 ~~~----~n~~~~~~~~~~~~~~ii~~~~~~~~ 335 (453)
T PRK09496 307 DDE----ANILSSLLAKRLGAKKVIALVNRPAY 335 (453)
T ss_pred CcH----HHHHHHHHHHHhCCCeEEEEECCcch
Confidence 321 11111222234466677666554443
|
|
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0031 Score=56.30 Aligned_cols=67 Identities=19% Similarity=0.237 Sum_probs=49.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----------CC-------------ceeeccCccc
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----------MG-------------ITPSLKWTEA 139 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----------~~-------------i~~~~~d~~~ 139 (272)
.++|.|+|+|.+|..++..|... |++|+..+|+++..+.... .+ +.. ..+.+.
T Consensus 4 ~~kI~vIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~ 80 (292)
T PRK07530 4 IKKVGVIGAGQMGNGIAHVCALA--GYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARIST-ATDLED 80 (292)
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEe-eCCHHH
Confidence 46899999999999999999999 9999999998766543211 12 111 122345
Q ss_pred cCCCCEEEEecCCC
Q 024143 140 TQKFPYVIFCAPPS 153 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~ 153 (272)
+.++|+||.|.+..
T Consensus 81 ~~~aD~Vieavpe~ 94 (292)
T PRK07530 81 LADCDLVIEAATED 94 (292)
T ss_pred hcCCCEEEEcCcCC
Confidence 77999999998753
|
|
| >PLN02256 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0018 Score=58.40 Aligned_cols=67 Identities=16% Similarity=0.292 Sum_probs=48.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-ccc-CCCCEEEEecCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EAT-QKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~-~~~D~Vi~~a~~~ 153 (272)
.+++|.|+|+|.+|+.+++.|.+. |++|+++++++.. ......++... .+. +.. .++|+||.|.++.
T Consensus 35 ~~~kI~IIG~G~mG~slA~~L~~~--G~~V~~~d~~~~~-~~a~~~gv~~~-~~~~e~~~~~aDvVilavp~~ 103 (304)
T PLN02256 35 RKLKIGIVGFGNFGQFLAKTFVKQ--GHTVLATSRSDYS-DIAAELGVSFF-RDPDDFCEEHPDVVLLCTSIL 103 (304)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECccHH-HHHHHcCCeee-CCHHHHhhCCCCEEEEecCHH
Confidence 557899999999999999999998 9999999988632 22223455432 222 233 4689999998864
|
|
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00073 Score=60.29 Aligned_cols=63 Identities=21% Similarity=0.257 Sum_probs=50.6
Q ss_pred EEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 89 IVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 89 ItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|+|.|.+|..+++.|.+. |++|++.+|++++.+.+...+........++.+++|+||.|.++.
T Consensus 1 ~IGlG~mG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~ 63 (288)
T TIGR01692 1 FIGLGNMGGPMAANLLKA--GHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAG 63 (288)
T ss_pred CCcccHhHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCh
Confidence 469999999999999999 999999999988887776666543221124678899999999863
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0024 Score=61.45 Aligned_cols=67 Identities=16% Similarity=0.115 Sum_probs=50.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-------------------CC-ceeeccCc-cccCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------------------MG-ITPSLKWT-EATQK 142 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-------------------~~-i~~~~~d~-~~~~~ 142 (272)
.+||.|+|+|.+|+.++..|+.. |++|++.++++++.+.+.. .+ +.. ..+. +++++
T Consensus 4 i~kIavIG~G~MG~~iA~~la~~--G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~-~~~~~ea~~~ 80 (495)
T PRK07531 4 IMKAACIGGGVIGGGWAARFLLA--GIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTF-CASLAEAVAG 80 (495)
T ss_pred cCEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEe-eCCHHHHhcC
Confidence 36899999999999999999999 9999999998776544311 01 111 1222 46789
Q ss_pred CCEEEEecCCC
Q 024143 143 FPYVIFCAPPS 153 (272)
Q Consensus 143 ~D~Vi~~a~~~ 153 (272)
+|+||-|+...
T Consensus 81 aD~Vieavpe~ 91 (495)
T PRK07531 81 ADWIQESVPER 91 (495)
T ss_pred CCEEEEcCcCC
Confidence 99999888764
|
|
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0032 Score=56.30 Aligned_cols=67 Identities=15% Similarity=0.178 Sum_probs=49.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhh-----------hhhCC------------ceeeccCcccc
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-----------LINMG------------ITPSLKWTEAT 140 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~-----------l~~~~------------i~~~~~d~~~~ 140 (272)
+++|.|+|+|.+|+.++..|... |++|++.++++++.+. +...+ ......+.+.+
T Consensus 4 ~~~V~vIG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 81 (295)
T PLN02545 4 IKKVGVVGAGQMGSGIAQLAAAA--GMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEEL 81 (295)
T ss_pred cCEEEEECCCHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHh
Confidence 46899999999999999999999 9999999998766432 21111 11112233467
Q ss_pred CCCCEEEEecCC
Q 024143 141 QKFPYVIFCAPP 152 (272)
Q Consensus 141 ~~~D~Vi~~a~~ 152 (272)
+++|+||-|+..
T Consensus 82 ~~aD~Vieav~e 93 (295)
T PLN02545 82 RDADFIIEAIVE 93 (295)
T ss_pred CCCCEEEEcCcc
Confidence 899999998874
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0013 Score=55.17 Aligned_cols=69 Identities=13% Similarity=0.134 Sum_probs=49.1
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeecc---Cc----cccCCCCEEEEe
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLK---WT----EATQKFPYVIFC 149 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~---d~----~~~~~~D~Vi~~ 149 (272)
..++++|+|+ |.+|+.+++.|.+. |++|+.+.|+.++.+.+.. .+...... +. +.+.++|+||++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~--g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLARE--GARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 4478999996 99999999999999 9999999998776554422 12222111 21 356789998887
Q ss_pred cCCC
Q 024143 150 APPS 153 (272)
Q Consensus 150 a~~~ 153 (272)
.+..
T Consensus 105 t~~g 108 (194)
T cd01078 105 GAAG 108 (194)
T ss_pred CCCC
Confidence 6644
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0072 Score=54.36 Aligned_cols=68 Identities=13% Similarity=0.099 Sum_probs=48.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhh----hC----C--ceee-ccCccccCCCCEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELI----NM----G--ITPS-LKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~----~~----~--i~~~-~~d~~~~~~~D~Vi~~a~ 151 (272)
|+||.|+|+|.+|..++..+... |+ +|+.+++++++..... .. + .... ..|.+.++++|+||.+++
T Consensus 2 ~~KI~VIGaG~vG~~ia~~la~~--~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~~~~~aDiVii~~~ 79 (307)
T PRK06223 2 RKKISIIGAGNVGATLAHLLALK--ELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYEDIAGSDVVVITAG 79 (307)
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHHHHCCCCEEEECCC
Confidence 68999999999999999999888 65 9999999776543211 11 1 1111 123356889999999987
Q ss_pred CC
Q 024143 152 PS 153 (272)
Q Consensus 152 ~~ 153 (272)
..
T Consensus 80 ~p 81 (307)
T PRK06223 80 VP 81 (307)
T ss_pred CC
Confidence 53
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0052 Score=54.91 Aligned_cols=67 Identities=18% Similarity=0.219 Sum_probs=49.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec------------cCc-cccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL------------KWT-EATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~------------~d~-~~~~~~D~Vi~~a~ 151 (272)
|||+|+|+|.+|..++..|.+. |++|+.++| +++.+.+...++.... .+. +....+|+||.|..
T Consensus 1 mkI~IiG~G~iG~~~a~~L~~~--g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk 77 (305)
T PRK12921 1 MRIAVVGAGAVGGTFGGRLLEA--GRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVK 77 (305)
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEec
Confidence 4799999999999999999999 999999999 6666666554443221 111 12367899998887
Q ss_pred CCC
Q 024143 152 PSR 154 (272)
Q Consensus 152 ~~~ 154 (272)
...
T Consensus 78 ~~~ 80 (305)
T PRK12921 78 AYQ 80 (305)
T ss_pred ccC
Confidence 543
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0075 Score=54.62 Aligned_cols=68 Identities=13% Similarity=0.137 Sum_probs=50.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhhh----hhC-----CceeeccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDEL----INM-----GITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~l----~~~-----~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
+||.|+|+|.+|+.++..|... +. ++..+++++++.... ... .+.....+.+.++++|+||.+++..
T Consensus 7 ~ki~iiGaG~vG~~~a~~l~~~--~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIitag~~ 84 (315)
T PRK00066 7 NKVVLVGDGAVGSSYAYALVNQ--GIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVITAGAP 84 (315)
T ss_pred CEEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEEecCCC
Confidence 5899999999999999999988 76 899999977654321 111 1222223345789999999999864
Q ss_pred C
Q 024143 154 R 154 (272)
Q Consensus 154 ~ 154 (272)
.
T Consensus 85 ~ 85 (315)
T PRK00066 85 Q 85 (315)
T ss_pred C
Confidence 4
|
|
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0022 Score=63.71 Aligned_cols=68 Identities=12% Similarity=0.230 Sum_probs=49.9
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-ccc-CCCCEEEEecCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EAT-QKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~-~~~D~Vi~~a~~~ 153 (272)
..+++|.|+|.|.+|+.+++.|.+. |++|++.+|+... ......++... .+. +.. .++|+||.|.++.
T Consensus 50 ~~~~kIgIIG~G~mG~slA~~L~~~--G~~V~~~dr~~~~-~~A~~~Gv~~~-~d~~e~~~~~aDvViLavP~~ 119 (667)
T PLN02712 50 TTQLKIAIIGFGNYGQFLAKTLISQ--GHTVLAHSRSDHS-LAARSLGVSFF-LDPHDLCERHPDVILLCTSII 119 (667)
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHH-HHHHHcCCEEe-CCHHHHhhcCCCEEEEcCCHH
Confidence 4567899999999999999999999 9999999997433 22333455432 232 223 4689999998863
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0058 Score=51.57 Aligned_cols=69 Identities=17% Similarity=0.149 Sum_probs=51.9
Q ss_pred CCeEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC--CceeeccCc---c-----------ccCCCCEE
Q 024143 84 ENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSLKWT---E-----------ATQKFPYV 146 (272)
Q Consensus 84 ~~~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~--~i~~~~~d~---~-----------~~~~~D~V 146 (272)
..+||||| +--||..|++++.+. |-+|+...|++.++++.... ++...++|. + .....+++
T Consensus 5 gnTiLITGG~sGIGl~lak~f~el--gN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 5 GNTILITGGASGIGLALAKRFLEL--GNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred CcEEEEeCCcchhhHHHHHHHHHh--CCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 46899997 567999999999999 99999999998887765432 333333442 1 23478999
Q ss_pred EEecCCCC
Q 024143 147 IFCAPPSR 154 (272)
Q Consensus 147 i~~a~~~~ 154 (272)
|+||+...
T Consensus 83 iNNAGIqr 90 (245)
T COG3967 83 INNAGIQR 90 (245)
T ss_pred eecccccc
Confidence 99999643
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0016 Score=58.13 Aligned_cols=67 Identities=21% Similarity=0.202 Sum_probs=48.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC------------Cce------------eeccCc-c
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM------------GIT------------PSLKWT-E 138 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~------------~i~------------~~~~d~-~ 138 (272)
+++|.|+|+|.+|+.++..|... |++|+..+++++..+..... ... ....|. +
T Consensus 3 ~~kIaViGaG~mG~~iA~~la~~--G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~ 80 (287)
T PRK08293 3 IKNVTVAGAGVLGSQIAFQTAFH--GFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAE 80 (287)
T ss_pred ccEEEEECCCHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHH
Confidence 46899999999999999999999 99999999987654332210 110 011232 3
Q ss_pred ccCCCCEEEEecCC
Q 024143 139 ATQKFPYVIFCAPP 152 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~ 152 (272)
+++++|+||.|.+.
T Consensus 81 a~~~aDlVieavpe 94 (287)
T PRK08293 81 AVKDADLVIEAVPE 94 (287)
T ss_pred HhcCCCEEEEeccC
Confidence 57899999999874
|
|
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0013 Score=52.57 Aligned_cols=63 Identities=21% Similarity=0.325 Sum_probs=47.7
Q ss_pred EEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC------c------c--ccCCCCEEEEecCC
Q 024143 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW------T------E--ATQKFPYVIFCAPP 152 (272)
Q Consensus 87 IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d------~------~--~~~~~D~Vi~~a~~ 152 (272)
|+|+|+|-+|..++.+|.+. |++|..++|.+ ..+.+...++.....+ . + ....+|+||.|.-.
T Consensus 1 I~I~G~GaiG~~~a~~L~~~--g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa 77 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQA--GHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKA 77 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHT--TCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSG
T ss_pred CEEECcCHHHHHHHHHHHHC--CCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEecc
Confidence 78999999999999999998 99999999988 6666665565443322 0 1 34678999998754
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0017 Score=64.48 Aligned_cols=68 Identities=16% Similarity=0.286 Sum_probs=49.9
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccC-CCCEEEEecCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQ-KFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~-~~D~Vi~~a~~~ 153 (272)
..+++|.|+|.|.+|+.+++.|.+. |++|++.+|+... ......|+... .+. +... .+|+||.|.++.
T Consensus 367 ~~~~kIgIIGlG~mG~slA~~L~~~--G~~V~~~dr~~~~-~~a~~~Gv~~~-~~~~el~~~~aDvVILavP~~ 436 (667)
T PLN02712 367 GSKLKIAIVGFGNFGQFLAKTMVKQ--GHTVLAYSRSDYS-DEAQKLGVSYF-SDADDLCEEHPEVILLCTSIL 436 (667)
T ss_pred CCCCEEEEEecCHHHHHHHHHHHHC--cCEEEEEECChHH-HHHHHcCCeEe-CCHHHHHhcCCCEEEECCChH
Confidence 3557999999999999999999999 9999999998543 22333455432 232 2343 589999998864
|
|
| >PRK15059 tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0015 Score=58.53 Aligned_cols=65 Identities=22% Similarity=0.333 Sum_probs=49.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
+|.|+|.|.+|..+++.|++. |++|++.+|++. .+.+...+........++.+++|+||.|.+..
T Consensus 2 ~Ig~IGlG~MG~~ma~~L~~~--G~~v~v~~~~~~-~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~ 66 (292)
T PRK15059 2 KLGFIGLGIMGTPMAINLARA--GHQLHVTTIGPV-ADELLSLGAVSVETARQVTEASDIIFIMVPDT 66 (292)
T ss_pred eEEEEccCHHHHHHHHHHHHC--CCeEEEEeCCHh-HHHHHHcCCeecCCHHHHHhcCCEEEEeCCCh
Confidence 799999999999999999999 999999998764 34454455544322224567899999988753
|
|
| >KOG0409 consensus Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.00089 Score=59.33 Aligned_cols=68 Identities=18% Similarity=0.223 Sum_probs=59.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
+++|-.+|.|..|++++..|++. ||+|++.+|..++.+.+...|.+......+..+.+|+||-+.+..
T Consensus 35 ~~~iGFIGLG~MG~~M~~nLik~--G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~ 102 (327)
T KOG0409|consen 35 KTRIGFIGLGNMGSAMVSNLIKA--GYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNP 102 (327)
T ss_pred cceeeEEeeccchHHHHHHHHHc--CCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCCh
Confidence 46899999999999999999999 999999999999999988888766544446788999999999853
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0022 Score=60.04 Aligned_cols=68 Identities=13% Similarity=0.094 Sum_probs=53.7
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
...++|+|+|+|.||..+++.+... |.+|+++++++.+.......|......+ +++.++|+||.|.+.
T Consensus 200 l~GktVvViG~G~IG~~va~~ak~~--Ga~ViV~d~d~~R~~~A~~~G~~~~~~~-e~v~~aDVVI~atG~ 267 (413)
T cd00401 200 IAGKVAVVAGYGDVGKGCAQSLRGQ--GARVIVTEVDPICALQAAMEGYEVMTME-EAVKEGDIFVTTTGN 267 (413)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEECChhhHHHHHhcCCEEccHH-HHHcCCCEEEECCCC
Confidence 4557999999999999999999999 9999999998877665555666443222 466789999988763
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK06928 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0033 Score=55.86 Aligned_cols=68 Identities=16% Similarity=0.272 Sum_probs=48.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCC----CeEEEEecCCc-chhhhhhC--CceeeccCc-cccCCCCEEEEecCCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTAD-HHDELINM--GITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g----~~V~~~~R~~~-~~~~l~~~--~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
|++|.|+|+|.+|+.+++.|.+. | ++|++.+|++. +...+... ++.. ..+. +...++|+||.|..+..
T Consensus 1 m~~I~iIG~G~mG~ala~~L~~~--g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~-~~~~~e~~~~aDvVilavpp~~ 76 (277)
T PRK06928 1 MEKIGFIGYGSMADMIATKLLET--EVATPEEIILYSSSKNEHFNQLYDKYPTVEL-ADNEAEIFTKCDHSFICVPPLA 76 (277)
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCCCcccEEEEeCCcHHHHHHHHHHcCCeEE-eCCHHHHHhhCCEEEEecCHHH
Confidence 57899999999999999999998 6 78999988643 33333221 1221 1232 35678999998888643
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.017 Score=51.97 Aligned_cols=35 Identities=23% Similarity=0.239 Sum_probs=29.8
Q ss_pred cCCCeEEEEcCc---HHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 82 VGENDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 82 ~~~~~IlItGaG---fiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
+..|+++|||+| -||+++++.|.++ |.+|+..++.
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~--Ga~Vvv~~~~ 43 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEA--GATILVGTWV 43 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHC--CCEEEEEecc
Confidence 345789999985 7999999999999 9999987643
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0033 Score=59.49 Aligned_cols=66 Identities=20% Similarity=0.330 Sum_probs=49.3
Q ss_pred CeEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh-hhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL-INMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l-~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
|+|.|+| +|.+|+.+++.|.+. |++|++.+|++++...+ ...++.. ..+. +.+.++|+||.|.++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~--G~~V~v~~r~~~~~~~~a~~~gv~~-~~~~~e~~~~aDvVIlavp~~ 69 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEK--GFEVIVTGRDPKKGKEVAKELGVEY-ANDNIDAAKDADIVIISVPIN 69 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHcCCee-ccCHHHHhccCCEEEEecCHH
Confidence 4799997 699999999999999 99999999987664332 2235432 2222 4577899999998863
|
|
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0043 Score=55.36 Aligned_cols=37 Identities=19% Similarity=0.369 Sum_probs=33.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchh
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD 123 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~ 123 (272)
++|.|+|+|.+|+.++..|... |++|++.+++++..+
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~--G~~V~l~d~~~~~l~ 40 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFART--GYDVTIVDVSEEILK 40 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhc--CCeEEEEeCCHHHHH
Confidence 6899999999999999999999 999999999876654
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0024 Score=56.48 Aligned_cols=68 Identities=21% Similarity=0.266 Sum_probs=49.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC----C-ceeeccCccccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----G-ITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~----~-i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
.++++|+|+|-+|+.++..|.+. |++|+++.|++++.+.+... + +.....+.....++|+||+|.+..
T Consensus 117 ~k~vliiGaGg~g~aia~~L~~~--g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivInatp~g 189 (270)
T TIGR00507 117 NQRVLIIGAGGAARAVALPLLKA--DCNVIIANRTVSKAEELAERFQRYGEIQAFSMDELPLHRVDLIINATSAG 189 (270)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhcCceEEechhhhcccCccEEEECCCCC
Confidence 46899999999999999999999 99999999987766554321 1 112112212345799999999864
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0021 Score=56.46 Aligned_cols=65 Identities=12% Similarity=0.072 Sum_probs=48.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec---cCcc----c--cCCCCEEEEecCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL---KWTE----A--TQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~---~d~~----~--~~~~D~Vi~~a~~ 152 (272)
|+|||+|+ |. |+.|++.|.++ |++|++.++++...+.+...+...+. .|.+ . -.++|+||++..|
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~--g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQ--GIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHP 75 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhC--CCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence 57999975 99 99999999999 99999999988766555444333332 2221 2 2479999999875
|
This enzyme was found to be a monomer by gel filtration. |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.011 Score=53.37 Aligned_cols=68 Identities=16% Similarity=0.132 Sum_probs=50.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCC--CeEEEEecCCcchhh----hhhCC-----ceeeccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDE----LINMG-----ITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g--~~V~~~~R~~~~~~~----l~~~~-----i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|||.|+|+|.+|..++..|..+ | .+|..+++++++... +.... ......|.+.++++|+||.+++..
T Consensus 1 mkI~IIGaG~VG~~~a~~l~~~--g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViita~~~ 78 (308)
T cd05292 1 MKVAIVGAGFVGSTTAYALLLR--GLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVITAGAN 78 (308)
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEccCCC
Confidence 4799999999999999999999 7 689999998765432 22111 111223445789999999999864
Q ss_pred C
Q 024143 154 R 154 (272)
Q Consensus 154 ~ 154 (272)
.
T Consensus 79 ~ 79 (308)
T cd05292 79 Q 79 (308)
T ss_pred C
Confidence 3
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0057 Score=55.51 Aligned_cols=68 Identities=13% Similarity=0.170 Sum_probs=48.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-----------hCCce--------eeccCc-cccCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----------NMGIT--------PSLKWT-EATQKF 143 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-----------~~~i~--------~~~~d~-~~~~~~ 143 (272)
.++|.|+|+|.+|+.++..+... |++|+..+++++..+... ..+.. ....+. +++.++
T Consensus 7 i~~VaVIGaG~MG~giA~~~a~a--G~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~a 84 (321)
T PRK07066 7 IKTFAAIGSGVIGSGWVARALAH--GLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADA 84 (321)
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCC
Confidence 36899999999999999999999 999999999876543211 11111 011122 367899
Q ss_pred CEEEEecCCC
Q 024143 144 PYVIFCAPPS 153 (272)
Q Consensus 144 D~Vi~~a~~~ 153 (272)
|.||-++...
T Consensus 85 DlViEavpE~ 94 (321)
T PRK07066 85 DFIQESAPER 94 (321)
T ss_pred CEEEECCcCC
Confidence 9999988753
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0027 Score=56.41 Aligned_cols=70 Identities=21% Similarity=0.230 Sum_probs=51.8
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhhC-C----ceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINM-G----ITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~~-~----i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++++|+|+|-+|+.++..|.+. | .+|+++.|+.++.+.+... . +.. ..+. +.+.++|+||++.+...
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~--g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivInaTp~g~ 197 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDL--GVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQEELADFDLIINATSAGM 197 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchhccccCCEEEECCcCCC
Confidence 4457899999999999999999999 8 7999999998776655331 1 111 1121 35678999999987643
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.00038 Score=73.93 Aligned_cols=61 Identities=15% Similarity=0.082 Sum_probs=50.6
Q ss_pred cceeeecccCccccc-ccccccCCcchhhhcc-ccccccc--cccccceeccccccccccccccc
Q 024143 2 GTISCTNTVSLNGAC-TRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNFQVT 62 (272)
Q Consensus 2 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 62 (272)
..||+.++..-.-.. ++||++||||++|-|| -++++.+ ++|...+|..++...++..+...
T Consensus 984 ~~~~~~~l~~~~~~~~~~ff~lGg~Sl~a~~l~~~l~~~~~~~l~~~~~~~~pti~~la~~l~~~ 1048 (1296)
T PRK10252 984 AAAFSSLLGCDVVDADADFFALGGHSLLAMKLAAQLSRQFARQVTPGQVMVASTVAKLATLLDAE 1048 (1296)
T ss_pred HHHHHHHhCCCCCCCCcCHHHcCCChHHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHHhcc
Confidence 568999986532222 8999999999999999 9999987 88899999999999998776543
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0014 Score=53.22 Aligned_cols=66 Identities=17% Similarity=0.267 Sum_probs=47.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCcee-------------eccCc-cccCCCCEEEEecC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-------------SLKWT-EATQKFPYVIFCAP 151 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~-------------~~~d~-~~~~~~D~Vi~~a~ 151 (272)
||.|+|+|..|..++..|.++ |++|+...|+++..+.+...+... ...|. ++++++|+||.+.+
T Consensus 1 KI~ViGaG~~G~AlA~~la~~--g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavP 78 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADN--GHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVP 78 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHC--TEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-
T ss_pred CEEEECcCHHHHHHHHHHHHc--CCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEeccc
Confidence 689999999999999999999 999999999987666554322111 11232 46889999998877
Q ss_pred CC
Q 024143 152 PS 153 (272)
Q Consensus 152 ~~ 153 (272)
..
T Consensus 79 s~ 80 (157)
T PF01210_consen 79 SQ 80 (157)
T ss_dssp GG
T ss_pred HH
Confidence 64
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0054 Score=50.80 Aligned_cols=100 Identities=18% Similarity=0.073 Sum_probs=53.8
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-cc------hhhhhhCCcee--eccCc---c-----------ccC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DH------HDELINMGITP--SLKWT---E-----------ATQ 141 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~~------~~~l~~~~i~~--~~~d~---~-----------~~~ 141 (272)
+++|||. |-||..+++.|.++. ..+|+.+.|+. .. ...+...+.+. ...|. + ...
T Consensus 2 tylitGG~gglg~~la~~La~~~-~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERG-ARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcC-CCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 5789985 999999999999992 34888999982 11 23344445443 33332 1 124
Q ss_pred CCCEEEEecCCCCCC---C-----hH-------HHHHHHHH--HhcCCCeEEEEecce-eecC
Q 024143 142 KFPYVIFCAPPSRSL---D-----YP-------GDVRLAAL--SWNGEGSFLFTSSSA-IYDC 186 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~-------~~~~~l~~--~~~gvkr~V~~SS~~-vYg~ 186 (272)
.++.|||+++..... + +. ..+.++.. ....++.||..||.. ++|.
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~ 143 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGG 143 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccC
Confidence 678999999864321 1 11 11122221 234688999999976 4554
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0059 Score=55.53 Aligned_cols=69 Identities=16% Similarity=0.143 Sum_probs=45.8
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCC-----CCeEEEEecCC--cchhh----hhhC------CceeeccCccccCCCCEEE
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHP-----GCQIYGQTMTA--DHHDE----LINM------GITPSLKWTEATQKFPYVI 147 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~-----g~~V~~~~R~~--~~~~~----l~~~------~i~~~~~d~~~~~~~D~Vi 147 (272)
||.|+|+ |.+|+.++..|..+.- .++++.+++.+ ++... +... +......+.+.++++|+||
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV 81 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI 81 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence 7999998 9999999999987510 22588888876 43221 1110 1111112335789999999
Q ss_pred EecCCCC
Q 024143 148 FCAPPSR 154 (272)
Q Consensus 148 ~~a~~~~ 154 (272)
|+|+...
T Consensus 82 itAG~~~ 88 (323)
T cd00704 82 LVGAFPR 88 (323)
T ss_pred EeCCCCC
Confidence 9999644
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0027 Score=61.90 Aligned_cols=67 Identities=25% Similarity=0.333 Sum_probs=56.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----ccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----~~~~~D~Vi~~a~~ 152 (272)
..+|+|.|+|.+|+++++.|.++ |++|++++.++++.+.+++.+...+.+|. + -.+++|.|+-+.+.
T Consensus 417 ~~hiiI~G~G~~G~~la~~L~~~--g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 417 CNHALLVGYGRVGSLLGEKLLAA--GIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCCEEEECCChHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCC
Confidence 36899999999999999999999 99999999999998888878888888774 1 24588887766554
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0027 Score=59.64 Aligned_cols=68 Identities=13% Similarity=0.089 Sum_probs=50.7
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
...++|+|+|+|.+|+.+++.|... |.+|++.++++.+.......|.+....+ ++++++|+||.+.+.
T Consensus 210 l~Gk~VlViG~G~IG~~vA~~lr~~--Ga~ViV~d~dp~ra~~A~~~G~~v~~l~-eal~~aDVVI~aTG~ 277 (425)
T PRK05476 210 IAGKVVVVAGYGDVGKGCAQRLRGL--GARVIVTEVDPICALQAAMDGFRVMTME-EAAELGDIFVTATGN 277 (425)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEcCCchhhHHHHhcCCEecCHH-HHHhCCCEEEECCCC
Confidence 3457999999999999999999999 9999999998776543333354432112 456789999887653
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.003 Score=51.44 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=46.0
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
+..++++|+|.|.+|+-+++.|+.. |.+|++..++|-+.-+-...|.+....+ +++..+|++|-+-+..
T Consensus 21 l~Gk~vvV~GYG~vG~g~A~~lr~~--Ga~V~V~e~DPi~alqA~~dGf~v~~~~-~a~~~adi~vtaTG~~ 89 (162)
T PF00670_consen 21 LAGKRVVVIGYGKVGKGIARALRGL--GARVTVTEIDPIRALQAAMDGFEVMTLE-EALRDADIFVTATGNK 89 (162)
T ss_dssp -TTSEEEEE--SHHHHHHHHHHHHT--T-EEEEE-SSHHHHHHHHHTT-EEE-HH-HHTTT-SEEEE-SSSS
T ss_pred eCCCEEEEeCCCcccHHHHHHHhhC--CCEEEEEECChHHHHHhhhcCcEecCHH-HHHhhCCEEEECCCCc
Confidence 3457899999999999999999999 9999999998765433333566654333 5788999887776654
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0062 Score=57.61 Aligned_cols=68 Identities=24% Similarity=0.298 Sum_probs=51.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC-cch----hhhhhCCceeeccCc--cccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA-DHH----DELINMGITPSLKWT--EATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~----~~l~~~~i~~~~~d~--~~~~~~D~Vi~~a~~~ 153 (272)
.++|+|+|+|.+|..+++.|.++ |++|++.++.. +.. ..+...++.....+. +...++|+||++++..
T Consensus 5 ~k~v~iiG~g~~G~~~A~~l~~~--G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 5 GKKVLVVGAGVSGLALAKFLKKL--GAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGVP 79 (450)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCCC
Confidence 46899999988999999999999 99999999874 222 233344666655543 2346799999998853
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0058 Score=55.21 Aligned_cols=72 Identities=19% Similarity=0.207 Sum_probs=51.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccC-c-cccCCCCEEEEecCCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKW-T-EATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d-~-~~~~~~D~Vi~~a~~~~~ 155 (272)
..++|+|+|+|.+|+.+++.|... .+.+|++++|++++...+.. .+......+ . +.+.++|+||.|.+....
T Consensus 177 ~~~~V~ViGaG~iG~~~a~~L~~~-g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVi~at~~~~~ 251 (311)
T cd05213 177 KGKKVLVIGAGEMGELAAKHLAAK-GVAEITIANRTYERAEELAKELGGNAVPLDELLELLNEADVVISATGAPHY 251 (311)
T ss_pred cCCEEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhcCCEEEECCCCCch
Confidence 457999999999999999999885 13689999998877655433 243332222 1 356789999999886543
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK06249 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0063 Score=54.92 Aligned_cols=67 Identities=12% Similarity=0.170 Sum_probs=48.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec--c-----------CccccCCCCEEEEec
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--K-----------WTEATQKFPYVIFCA 150 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~--~-----------d~~~~~~~D~Vi~~a 150 (272)
+|+|+|+|+|-+|..++..|.+. |++|+.+.|++. +.+...++.... + +.+....+|+||.|.
T Consensus 5 ~m~I~IiG~GaiG~~lA~~L~~~--g~~V~~~~r~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vilav 80 (313)
T PRK06249 5 TPRIGIIGTGAIGGFYGAMLARA--GFDVHFLLRSDY--EAVRENGLQVDSVHGDFHLPPVQAYRSAEDMPPCDWVLVGL 80 (313)
T ss_pred CcEEEEECCCHHHHHHHHHHHHC--CCeEEEEEeCCH--HHHHhCCeEEEeCCCCeeecCceEEcchhhcCCCCEEEEEe
Confidence 46899999999999999999999 999999999752 334344433211 1 112345789999987
Q ss_pred CCCC
Q 024143 151 PPSR 154 (272)
Q Consensus 151 ~~~~ 154 (272)
....
T Consensus 81 K~~~ 84 (313)
T PRK06249 81 KTTA 84 (313)
T ss_pred cCCC
Confidence 6543
|
|
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0028 Score=56.36 Aligned_cols=68 Identities=21% Similarity=0.238 Sum_probs=47.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh--hCCceeec-cC--ccccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI--NMGITPSL-KW--TEATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~--~~~i~~~~-~d--~~~~~~~D~Vi~~a~~~ 153 (272)
+++|+|+|.|.+|+.+++.|.++ |+.|.++.++........ ..++.... .+ .....++|+||.+.+..
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~--g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~ 75 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEA--GLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIE 75 (279)
T ss_pred CcEEEEECCchHHHHHHHHHHHc--CCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHH
Confidence 57899999999999999999999 998877776654432221 23332221 11 24566899999999853
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0031 Score=57.53 Aligned_cols=68 Identities=21% Similarity=0.212 Sum_probs=50.7
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|..- |++|++.+|.+.... ....+.... +. +.++.+|+|+.+.+...
T Consensus 148 L~gktvgIiG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~-~~~~~~~~~--~l~ell~~aDiV~l~lP~t~ 216 (333)
T PRK13243 148 VYGKTIGIIGFGRIGQAVARRAKGF--GMRILYYSRTRKPEA-EKELGAEYR--PLEELLRESDFVSLHVPLTK 216 (333)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCChhh-HHHcCCEec--CHHHHHhhCCEEEEeCCCCh
Confidence 4568999999999999999999998 999999998754432 112233322 22 46789999998887644
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.003 Score=58.73 Aligned_cols=71 Identities=14% Similarity=0.139 Sum_probs=51.1
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|..- |.+|.+.+|.....+.....++.....-.++++.+|+|+.+.+...
T Consensus 190 L~gktVGIvG~G~IG~~vA~~l~~f--G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~ 260 (385)
T PRK07574 190 LEGMTVGIVGAGRIGLAVLRRLKPF--DVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHP 260 (385)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCH
Confidence 3457899999999999999999998 9999999987633222222344322211257889999988887543
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.013 Score=52.92 Aligned_cols=67 Identities=16% Similarity=0.134 Sum_probs=46.6
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCC--eEEEEecCC--cchhh----hh----hCC--ceeec-cCccccCCCCEEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTA--DHHDE----LI----NMG--ITPSL-KWTEATQKFPYVIF 148 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~--~V~~~~R~~--~~~~~----l~----~~~--i~~~~-~d~~~~~~~D~Vi~ 148 (272)
|||.|+|+ |++|..++..|... |+ +|+.++|.+ ++... +. ..+ ..... .|.+.+.++|+||.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~--g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~~l~~aDiVii 78 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKE--DVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLSDVAGSDIVII 78 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHHHhCCCCEEEE
Confidence 58999997 99999999999998 76 599999954 33211 11 111 11211 23356899999999
Q ss_pred ecCCC
Q 024143 149 CAPPS 153 (272)
Q Consensus 149 ~a~~~ 153 (272)
+++..
T Consensus 79 tag~p 83 (309)
T cd05294 79 TAGVP 83 (309)
T ss_pred ecCCC
Confidence 99853
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0064 Score=58.05 Aligned_cols=69 Identities=19% Similarity=0.170 Sum_probs=51.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC----Cceeecc-Cc-cc---cCCCCEEEEecCCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPSLK-WT-EA---TQKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~----~i~~~~~-d~-~~---~~~~D~Vi~~a~~~~ 154 (272)
|.+|.|+|.|..|+.+++.|.++ ||+|.+.+|++++.+.+... +...... ++ +. ++++|+||.++.+..
T Consensus 1 ~~~IgvIGLG~MG~~lA~nL~~~--G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~ 78 (470)
T PTZ00142 1 MSDIGLIGLAVMGQNLALNIASR--GFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGE 78 (470)
T ss_pred CCEEEEEeEhHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChH
Confidence 46899999999999999999999 99999999999887766542 3221111 22 22 346899999877643
|
|
| >COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0096 Score=54.86 Aligned_cols=66 Identities=18% Similarity=0.294 Sum_probs=51.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec-------------------cCccccCCCCE
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-------------------KWTEATQKFPY 145 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~-------------------~d~~~~~~~D~ 145 (272)
.+|-|+|.||+|-.++-.+.++ |++|++++-++.+.+.+..-...... .|.+.++.+|+
T Consensus 10 ~~I~ViGLGYVGLPlA~~fA~~--G~~ViG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lraTtd~~~l~~~dv 87 (436)
T COG0677 10 ATIGVIGLGYVGLPLAAAFASA--GFKVIGVDINQKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRATTDPEELKECDV 87 (436)
T ss_pred eEEEEEccccccHHHHHHHHHc--CCceEeEeCCHHHHHHHhCCcceeecCcHHHHHHHHHhcCCceEecChhhcccCCE
Confidence 6899999999999999999999 99999999998888776532211111 12234569999
Q ss_pred EEEecCC
Q 024143 146 VIFCAPP 152 (272)
Q Consensus 146 Vi~~a~~ 152 (272)
+|.|++.
T Consensus 88 ~iI~VPT 94 (436)
T COG0677 88 FIICVPT 94 (436)
T ss_pred EEEEecC
Confidence 9999985
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.015 Score=52.82 Aligned_cols=70 Identities=19% Similarity=0.179 Sum_probs=49.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCC-CeEEEEecCCcchhh--h--hh----CC--ceee-ccCccccCCCCEEEEec
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDE--L--IN----MG--ITPS-LKWTEATQKFPYVIFCA 150 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~--l--~~----~~--i~~~-~~d~~~~~~~D~Vi~~a 150 (272)
..+||.|+|+|.+|+.++..+... | .+|+.++++++.... + .. .+ .... ..|.++++++|+||.++
T Consensus 4 ~~~KI~IIGaG~vG~~ia~~l~~~--~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~~l~~ADiVVita 81 (319)
T PTZ00117 4 KRKKISMIGAGQIGSTVALLILQK--NLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYEDIKDSDVVVITA 81 (319)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHC--CCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHHHhCCCCEEEECC
Confidence 346999999999999999998888 7 689999987755322 1 10 11 1111 13446789999999999
Q ss_pred CCCC
Q 024143 151 PPSR 154 (272)
Q Consensus 151 ~~~~ 154 (272)
+...
T Consensus 82 g~~~ 85 (319)
T PTZ00117 82 GVQR 85 (319)
T ss_pred CCCC
Confidence 7643
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.037 Score=47.43 Aligned_cols=136 Identities=12% Similarity=-0.026 Sum_probs=78.3
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEe-cCCcch-hhhhh-----CCceeeccCc---c-----------c--c
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHH-DELIN-----MGITPSLKWT---E-----------A--T 140 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~-R~~~~~-~~l~~-----~~i~~~~~d~---~-----------~--~ 140 (272)
+.|+|||+ --||--|+++|++. +|.+++..+ |++++. .++.. ..++....|. + . .
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 56999998 77999999999976 577776555 446663 22222 1233332221 1 1 4
Q ss_pred CCCCEEEEecCCCCC-------CC--hHHHH-----------H---HHHHH-h---c------CCCeEEEEecceeecCC
Q 024143 141 QKFPYVIFCAPPSRS-------LD--YPGDV-----------R---LAALS-W---N------GEGSFLFTSSSAIYDCS 187 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~-------~~--~~~~~-----------~---~l~~~-~---~------gvkr~V~~SS~~vYg~~ 187 (272)
++.|++|++|+.... .+ +.+.+ + .++.+ . . +...+|++||..- ..
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~--s~ 160 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAG--SI 160 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccc--cc
Confidence 588999999985221 10 11111 1 11111 1 1 1226898998652 11
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC---------eeEEeeCcee
Q 024143 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLY 231 (272)
Q Consensus 188 ~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~---------~~IlRp~~iy 231 (272)
. .....+ ...|..+|.+.-...++.. ++-+.||+|-
T Consensus 161 -----~-~~~~~~--~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~ 205 (249)
T KOG1611|consen 161 -----G-GFRPGG--LSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQ 205 (249)
T ss_pred -----C-CCCCcc--hhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEE
Confidence 1 111122 2689999998877666542 5678999985
|
|
| >PRK06476 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0017 Score=56.92 Aligned_cols=67 Identities=10% Similarity=0.116 Sum_probs=47.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCe---EEEEecCCcchhhhhhC--CceeeccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQ---IYGQTMTADHHDELINM--GITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~---V~~~~R~~~~~~~l~~~--~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|+|.|+|+|.+|+.+++.|++. |+. |.+.+|++++.+.+... ++.......+..+++|+||.|..+.
T Consensus 1 m~IgiIG~G~mG~aia~~L~~~--g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~aDvVilav~p~ 72 (258)
T PRK06476 1 MKIGFIGTGAITEAMVTGLLTS--PADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVDRSDVVFLAVRPQ 72 (258)
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHHhCCEEEEEeCHH
Confidence 3799999999999999999988 754 46677877766655432 2333221223567899999999864
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0044 Score=57.92 Aligned_cols=67 Identities=16% Similarity=0.103 Sum_probs=50.2
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
...++|+|+|+|.+|+.+++.+... |.+|+++++++.+.......|......+ ++++++|+||.+.+
T Consensus 193 l~Gk~VvViG~G~IG~~vA~~ak~~--Ga~ViV~d~dp~r~~~A~~~G~~v~~le-eal~~aDVVItaTG 259 (406)
T TIGR00936 193 IAGKTVVVAGYGWCGKGIAMRARGM--GARVIVTEVDPIRALEAAMDGFRVMTME-EAAKIGDIFITATG 259 (406)
T ss_pred CCcCEEEEECCCHHHHHHHHHHhhC--cCEEEEEeCChhhHHHHHhcCCEeCCHH-HHHhcCCEEEECCC
Confidence 4557999999999999999999999 9999999988766443333454433222 45678899887665
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0043 Score=56.87 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=29.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
+|+||.|+|+ |++|+.+++.|.+. |+++++++.++
T Consensus 1 ~m~kVaIiGAtG~vG~~l~~~L~~~-p~~elv~v~~~ 36 (343)
T PRK00436 1 MMIKVGIVGASGYTGGELLRLLLNH-PEVEIVAVTSR 36 (343)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHcC-CCceEEEEECc
Confidence 3679999997 99999999988764 68898887764
|
|
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0022 Score=68.57 Aligned_cols=68 Identities=12% Similarity=0.117 Sum_probs=55.5
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
.+++|-++|.|.+|..+++.|++. |++|++.+|++++.+.+...+........++.+++|+||.|.+.
T Consensus 323 ~~~~IGfIGlG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~ 390 (1378)
T PLN02858 323 PVKRIGFIGLGAMGFGMASHLLKS--NFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVAN 390 (1378)
T ss_pred CCCeEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCC
Confidence 457899999999999999999999 99999999998888777666654432222467899999999884
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0047 Score=58.62 Aligned_cols=68 Identities=10% Similarity=0.081 Sum_probs=50.1
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecC
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
.+..++|+|+|.|.||+.+++.|... |.+|++..+++.+.......|......+ ++++.+|+||.+.+
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~--Ga~ViV~e~dp~~a~~A~~~G~~~~~le-ell~~ADIVI~atG 318 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGF--GARVVVTEIDPICALQAAMEGYQVVTLE-DVVETADIFVTATG 318 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHhcCceeccHH-HHHhcCCEEEECCC
Confidence 34568999999999999999999999 9999999887665422222344433222 46778999987765
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0044 Score=58.69 Aligned_cols=67 Identities=10% Similarity=0.086 Sum_probs=49.3
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
+..++|+|+|.|.||+.+++.+... |.+|+++.+++.+.......+......+ +++..+|+||.+.+
T Consensus 252 LaGKtVvViGyG~IGr~vA~~aka~--Ga~VIV~e~dp~r~~eA~~~G~~vv~le-Eal~~ADVVI~tTG 318 (477)
T PLN02494 252 IAGKVAVICGYGDVGKGCAAAMKAA--GARVIVTEIDPICALQALMEGYQVLTLE-DVVSEADIFVTTTG 318 (477)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCchhhHHHHhcCCeeccHH-HHHhhCCEEEECCC
Confidence 4457999999999999999999988 9999999998765433333454433222 45677888887655
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0084 Score=54.47 Aligned_cols=70 Identities=14% Similarity=0.105 Sum_probs=50.3
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchh--hh---hh---CC--ceeec-cCccccCCCCEEEEe
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHD--EL---IN---MG--ITPSL-KWTEATQKFPYVIFC 149 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~--~l---~~---~~--i~~~~-~d~~~~~~~D~Vi~~ 149 (272)
+.++||.|+|+|.+|+.++..+... |+ +|+.++++++... .+ .. .+ ..... .|.++++++|+||.+
T Consensus 4 ~~~~KI~IIGaG~vG~~ia~~la~~--gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~~~l~~aDiVI~t 81 (321)
T PTZ00082 4 IKRRKISLIGSGNIGGVMAYLIVLK--NLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNYEDIAGSDVVIVT 81 (321)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCHHHhCCCCEEEEC
Confidence 3457999999999999999998888 85 8999999877432 11 00 11 12221 354678999999999
Q ss_pred cCCC
Q 024143 150 APPS 153 (272)
Q Consensus 150 a~~~ 153 (272)
++..
T Consensus 82 ag~~ 85 (321)
T PTZ00082 82 AGLT 85 (321)
T ss_pred CCCC
Confidence 9753
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0043 Score=55.89 Aligned_cols=54 Identities=11% Similarity=0.118 Sum_probs=40.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
.|||.|+|+|.+|+.+++.|.+. ||+|++.+|++.... .++.+++|+||.+.+.
T Consensus 4 ~m~I~iiG~G~~G~~lA~~l~~~--G~~V~~~~r~~~~~~-------------~~~~~~advvi~~vp~ 57 (308)
T PRK14619 4 PKTIAILGAGAWGSTLAGLASAN--GHRVRVWSRRSGLSL-------------AAVLADADVIVSAVSM 57 (308)
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCEEEEEeCCCCCCH-------------HHHHhcCCEEEEECCh
Confidence 36899999999999999999999 999999998753210 0234456666666653
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0039 Score=56.31 Aligned_cols=67 Identities=16% Similarity=0.206 Sum_probs=50.4
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~ 152 (272)
+..++|.|+|.|.+|+.+++.|++. |++|++..|.....+.....+++.. +. ++++.+|+|+.+.+.
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~--G~~ViV~~r~~~s~~~A~~~G~~v~--sl~Eaak~ADVV~llLPd 81 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDS--GVEVVVGVRPGKSFEVAKADGFEVM--SVSEAVRTAQVVQMLLPD 81 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHC--cCEEEEEECcchhhHHHHHcCCEEC--CHHHHHhcCCEEEEeCCC
Confidence 3457999999999999999999999 9999998775433333333455443 32 578899999888874
|
|
| >COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0082 Score=54.18 Aligned_cols=67 Identities=19% Similarity=0.256 Sum_probs=51.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC------------ccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW------------TEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d------------~~~~~~~D~Vi~~a~~ 152 (272)
|||+|+|+|-+|+.++-.|.+. |++|..+.|++. .+.+.+.|+...... .+....+|.||.+.-.
T Consensus 1 mkI~IlGaGAvG~l~g~~L~~~--g~~V~~~~R~~~-~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~Dlviv~vKa 77 (307)
T COG1893 1 MKILILGAGAIGSLLGARLAKA--GHDVTLLVRSRR-LEALKKKGLRIEDEGGNFTTPVVAATDAEALGPADLVIVTVKA 77 (307)
T ss_pred CeEEEECCcHHHHHHHHHHHhC--CCeEEEEecHHH-HHHHHhCCeEEecCCCccccccccccChhhcCCCCEEEEEecc
Confidence 5899999999999999999999 889999998765 666666665544321 1245589999988865
Q ss_pred CC
Q 024143 153 SR 154 (272)
Q Consensus 153 ~~ 154 (272)
..
T Consensus 78 ~q 79 (307)
T COG1893 78 YQ 79 (307)
T ss_pred cc
Confidence 43
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.026 Score=50.85 Aligned_cols=68 Identities=13% Similarity=0.145 Sum_probs=47.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhh----hhC----C--ceee-ccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL----INM----G--ITPS-LKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l----~~~----~--i~~~-~~d~~~~~~~D~Vi~~a~~ 152 (272)
+||.|+|+|++|..++..|... |+ +|+.+++.++..... ... . .... ..|.+.+.++|+||.+++.
T Consensus 2 ~KV~VIGaG~vG~~iA~~la~~--g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~~~~aDiVIitag~ 79 (305)
T TIGR01763 2 KKISVIGAGFVGATTAFRLAEK--ELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYADTANSDIVVITAGL 79 (305)
T ss_pred CEEEEECcCHHHHHHHHHHHHc--CCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHHhCCCCEEEEcCCC
Confidence 5899999999999999999998 76 899999865533211 000 0 1111 1333457899999999985
Q ss_pred CC
Q 024143 153 SR 154 (272)
Q Consensus 153 ~~ 154 (272)
..
T Consensus 80 p~ 81 (305)
T TIGR01763 80 PR 81 (305)
T ss_pred CC
Confidence 43
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0041 Score=54.90 Aligned_cols=68 Identities=18% Similarity=0.245 Sum_probs=46.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEE-EEecCCcchhhhhh-CCceeeccCc-cccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIY-GQTMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~-~~~R~~~~~~~l~~-~~i~~~~~d~-~~~~~~D~Vi~~a~~ 152 (272)
|+||.|+|+|.+|+.+++.|.+..+++++. +.+|++++.+.+.. .+...+ .+. +.+.++|+|+.|+++
T Consensus 1 mmrIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~~-~~~~ell~~~DvVvi~a~~ 71 (265)
T PRK13304 1 MLKIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKAC-LSIDELVEDVDLVVECASV 71 (265)
T ss_pred CCEEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCeeE-CCHHHHhcCCCEEEEcCCh
Confidence 579999999999999999998762246655 45666665554432 233222 222 344789999999875
|
|
| >TIGR00465 ilvC ketol-acid reductoisomerase | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0051 Score=55.65 Aligned_cols=67 Identities=16% Similarity=0.181 Sum_probs=49.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC-CcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~-~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
.++|.|+|+|.+|..+++.|++. |++|+...+. ..........|+.... ..++.+.+|+|+.+.++.
T Consensus 3 ~kkIgiIG~G~mG~AiA~~L~~s--G~~Viv~~~~~~~~~~~a~~~Gv~~~s-~~ea~~~ADiVvLaVpp~ 70 (314)
T TIGR00465 3 GKTVAIIGYGSQGHAQALNLRDS--GLNVIVGLRKGGASWKKATEDGFKVGT-VEEAIPQADLIMNLLPDE 70 (314)
T ss_pred cCEEEEEeEcHHHHHHHHHHHHC--CCeEEEEECcChhhHHHHHHCCCEECC-HHHHHhcCCEEEEeCCcH
Confidence 36899999999999999999999 9988765554 3344444445665432 224678999999999875
|
This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.033 Score=50.39 Aligned_cols=70 Identities=19% Similarity=0.080 Sum_probs=48.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhhC----C-ceeec-cCccccCCCCEEEEecCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINM----G-ITPSL-KWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~~----~-i~~~~-~d~~~~~~~D~Vi~~a~~~~ 154 (272)
+||.|+|+|.+|+.++..|....-..+++.++.++++... +... . ..... .|.+.++++|+||.+++...
T Consensus 4 ~Ki~IiGaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvitaG~~~ 83 (312)
T cd05293 4 NKVTVVGVGQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIVTAGARQ 83 (312)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEECCCCCC
Confidence 5999999999999999999887223478999987654432 1111 1 12222 45467899999999998643
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0096 Score=56.14 Aligned_cols=70 Identities=24% Similarity=0.320 Sum_probs=51.1
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhh-CCceeecc-Cc-cccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN-MGITPSLK-WT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~-~~i~~~~~-d~-~~~~~~D~Vi~~a~~~~ 154 (272)
..++|+|+|+|-+|+.+++.|... |. +|++..|++++...+.. .+...... +. +.+.++|+||.|.+...
T Consensus 181 ~~~~vlViGaG~iG~~~a~~L~~~--G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 181 SGKKVLVIGAGEMGELVAKHLAEK--GVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEADIVISSTGAPH 254 (423)
T ss_pred cCCEEEEECchHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCCEEEECCCCCC
Confidence 447899999999999999999988 87 89999998877654433 23222211 11 35678999999877543
|
|
| >PRK06545 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0042 Score=57.25 Aligned_cols=67 Identities=18% Similarity=0.260 Sum_probs=48.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceee--c-cCc-cccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS--L-KWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~--~-~d~-~~~~~~D~Vi~~a~~~ 153 (272)
++|.|+|+|.+|+.+++.|.+. |++|.+.++++++.......+.... . .+. ++.+++|+||.|.++.
T Consensus 1 ~~I~iIG~GliG~siA~~L~~~--G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~ 71 (359)
T PRK06545 1 RTVLIVGLGLIGGSLALAIKAA--GPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVD 71 (359)
T ss_pred CeEEEEEeCHHHHHHHHHHHhc--CCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHH
Confidence 3799999999999999999999 9999998888765443222222111 1 121 3567899999999874
|
|
| >PRK07634 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.005 Score=53.31 Aligned_cols=68 Identities=13% Similarity=0.285 Sum_probs=47.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCC---Ce-EEEEecC-Ccchhhhhh-CCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPG---CQ-IYGQTMT-ADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g---~~-V~~~~R~-~~~~~~l~~-~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
++||.|+|+|.+|+.+++.|.+. + .+ |++..|+ +++.+.+.. .++... .|. +.++++|+||.+.++..
T Consensus 4 ~~kI~iIG~G~mg~ala~~l~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~DiViiavp~~~ 78 (245)
T PRK07634 4 KHRILFIGAGRMAEAIFSGLLKT--SKEYIEEIIVSNRSNVEKLDQLQARYNVSTT-TDWKQHVTSVDTIVLAMPPSA 78 (245)
T ss_pred CCeEEEECcCHHHHHHHHHHHhC--CCCCcCeEEEECCCCHHHHHHHHHHcCcEEe-CChHHHHhcCCEEEEecCHHH
Confidence 35899999999999999999887 5 33 6677764 455554433 344433 232 45678999999988643
|
|
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0087 Score=49.71 Aligned_cols=35 Identities=17% Similarity=0.400 Sum_probs=30.2
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcch
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~ 122 (272)
||.|+|+|.+|+.++..+... |++|+..+++++..
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~--G~~V~l~d~~~~~l 35 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARA--GYEVTLYDRSPEAL 35 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHT--TSEEEEE-SSHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhC--CCcEEEEECChHHH
Confidence 689999999999999999999 99999999987654
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0057 Score=55.57 Aligned_cols=69 Identities=17% Similarity=0.207 Sum_probs=47.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
..++|.|+|.|-||+.+++.|..- |.+|++.++...+.... ..+......=.+.+..+|+|....+.+.
T Consensus 141 ~gkTvGIiG~G~IG~~va~~l~af--gm~v~~~d~~~~~~~~~-~~~~~~~~~Ld~lL~~sDiv~lh~PlT~ 209 (324)
T COG0111 141 AGKTVGIIGLGRIGRAVAKRLKAF--GMKVIGYDPYSPRERAG-VDGVVGVDSLDELLAEADILTLHLPLTP 209 (324)
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC--CCeEEEECCCCchhhhc-cccceecccHHHHHhhCCEEEEcCCCCc
Confidence 457999999999999999999999 99999999943322110 1122211100146788888877777644
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0052 Score=54.02 Aligned_cols=68 Identities=12% Similarity=0.102 Sum_probs=44.0
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE-ecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~-~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
|+||.|+|+ |.+|+.+++.+.+. ++++++++ ++++++.......++. ...|. +.+.++|+||.+..+.
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~~~~~~~~~~~~~i~-~~~dl~~ll~~~DvVid~t~p~ 71 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDRPGSPLVGQGALGVA-ITDDLEAVLADADVLIDFTTPE 71 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCccccccCCCCcc-ccCCHHHhccCCCEEEECCCHH
Confidence 469999998 99999999888764 47888874 4554433222111221 11232 2455799999888763
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0061 Score=56.66 Aligned_cols=69 Identities=16% Similarity=0.185 Sum_probs=50.4
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
...++|.|+|.|.||+.+++.|..- |.+|.+.+|.....+.....++.... +. +.+..+|+|+.+.+..
T Consensus 197 L~gktVGIVG~G~IG~~vA~~L~af--G~~V~~~d~~~~~~~~~~~~g~~~~~-~l~ell~~sDvV~l~lPlt 266 (386)
T PLN03139 197 LEGKTVGTVGAGRIGRLLLQRLKPF--NCNLLYHDRLKMDPELEKETGAKFEE-DLDAMLPKCDVVVINTPLT 266 (386)
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHC--CCEEEEECCCCcchhhHhhcCceecC-CHHHHHhhCCEEEEeCCCC
Confidence 4567999999999999999999988 99999999875333222233443321 22 4678899998887643
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.034 Score=50.17 Aligned_cols=70 Identities=14% Similarity=0.135 Sum_probs=48.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhhC------Cceeec-cCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINM------GITPSL-KWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~~------~i~~~~-~d~~~~~~~D~Vi~~a~~~ 153 (272)
+||.|+|+|.||+.++-.|..+..+.+++.+++.+++... +... ...... .+.+.++++|+|+.+|+..
T Consensus 1 ~KVaviGaG~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDiVvitAG~p 80 (313)
T COG0039 1 MKVAVIGAGNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADIVVITAGVP 80 (313)
T ss_pred CeEEEECCChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChhhhcCCCEEEEeCCCC
Confidence 5899999999999999999887445589999998554332 1110 111111 2245789999999999864
Q ss_pred C
Q 024143 154 R 154 (272)
Q Consensus 154 ~ 154 (272)
+
T Consensus 81 r 81 (313)
T COG0039 81 R 81 (313)
T ss_pred C
Confidence 4
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0068 Score=55.67 Aligned_cols=35 Identities=14% Similarity=0.295 Sum_probs=28.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
|.||.|+|+ |++|+.|++.|.+. |..+++++.+++
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~-p~~el~~~~~s~ 38 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANH-PWFEVTALAASE 38 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcC-CCceEEEEEcCh
Confidence 579999996 99999999988864 567999885543
|
|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.00025 Score=83.37 Aligned_cols=60 Identities=18% Similarity=0.220 Sum_probs=49.9
Q ss_pred CcceeeecccCcc-cccccccccCCcchhhhcc-ccccccc--cccccceeccccccccccccc
Q 024143 1 MGTISCTNTVSLN-GACTRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNFQ 60 (272)
Q Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 60 (272)
|+.||+.++..=. +..++||++|||||+|-|+ -++|+.+ ++++..+|+.++...++..+.
T Consensus 4246 l~~iw~~vL~~~~i~~~d~Ff~lGg~Sl~a~~l~~~~~~~~~~~~~~~~~f~~~t~~~la~~~~ 4309 (4334)
T PRK05691 4246 LATIWADVLKVERVGVHDNFFELGGHSLLATQIASRVQKALQRNVPLRAMFECSTVEELAEYIE 4309 (4334)
T ss_pred HHHHHHHHhCCCcCCCCCchhhcCCcHHHHHHHHHHHHHHhCCCccHHHHhcCCCHHHHHHHHh
Confidence 4679999997411 1129999999999999999 8889886 888999999999999987764
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0063 Score=59.94 Aligned_cols=67 Identities=13% Similarity=0.163 Sum_probs=57.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----ccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----~~~~~D~Vi~~a~~ 152 (272)
.++|+|.|.|.+|+.+++.|.++ |+++++++.++++.+.+.+.+...+.+|. + -.+++|.||-+...
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~--g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMAN--KMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhC--CCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCC
Confidence 36899999999999999999999 99999999999998888888888888774 1 25688988777654
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.006 Score=54.08 Aligned_cols=70 Identities=21% Similarity=0.341 Sum_probs=47.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEE-EecCCcchhhhhh-CCceeeccCc-cccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYG-QTMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~-~~R~~~~~~~l~~-~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
++||.|+|+|.||+.+++.|.+..++++|.+ .+|++++.+.+.. .+......+. +.+.++|+|+.|++..
T Consensus 6 ~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~~~eell~~~D~Vvi~tp~~ 78 (271)
T PRK13302 6 ELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVVPLDQLATHADIVVEAAPAS 78 (271)
T ss_pred eeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccCCHHHHhcCCCEEEECCCcH
Confidence 4689999999999999999986334788875 4666665544432 2321122222 3557899999998753
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.015 Score=52.86 Aligned_cols=67 Identities=10% Similarity=0.071 Sum_probs=44.5
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCC-------eEEEEecCCcc--hhh----hhhCC----ceeec-cC-ccccCCCCE
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTADH--HDE----LINMG----ITPSL-KW-TEATQKFPY 145 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~-------~V~~~~R~~~~--~~~----l~~~~----i~~~~-~d-~~~~~~~D~ 145 (272)
||.|+|+ |.+|++++..|... +. +++.+++.+.. ... +.... ..... .+ .+.++++|+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~--~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDi 78 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARG--RMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDV 78 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhc--cccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCE
Confidence 5899998 99999999999875 43 58899985442 211 11110 01111 12 357899999
Q ss_pred EEEecCCCC
Q 024143 146 VIFCAPPSR 154 (272)
Q Consensus 146 Vi~~a~~~~ 154 (272)
|||+|+...
T Consensus 79 VVitAG~~~ 87 (324)
T TIGR01758 79 AILVGAFPR 87 (324)
T ss_pred EEEcCCCCC
Confidence 999999754
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK05708 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0099 Score=53.54 Aligned_cols=66 Identities=17% Similarity=0.174 Sum_probs=47.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-Cceeec-c----------CccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSL-K----------WTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i~~~~-~----------d~~~~~~~D~Vi~~a~~ 152 (272)
|||+|+|+|-||..++-.|.+. |++|+.+.|..++.+.+... |+.... + +.+....+|+||.|.-.
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~--G~~V~lv~r~~~~~~~i~~~~Gl~i~~~g~~~~~~~~~~~~~~~~~~D~viv~vK~ 80 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARA--GLPVRLILRDRQRLAAYQQAGGLTLVEQGQASLYAIPAETADAAEPIHRLLLACKA 80 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhC--CCCeEEEEechHHHHHHhhcCCeEEeeCCcceeeccCCCCcccccccCEEEEECCH
Confidence 6899999999999999999999 99999999987666555432 343211 1 11123467999988754
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0062 Score=60.20 Aligned_cols=67 Identities=18% Similarity=0.252 Sum_probs=56.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----ccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----~~~~~D~Vi~~a~~ 152 (272)
.++|+|.|.|.+|+.+++.|.++ |+++++++.++++.+.+++.+...+.+|. + -++++|.||-+...
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~--g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSS--GVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhC--CCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCC
Confidence 36899999999999999999999 99999999999999888888888888774 1 24588888877643
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0058 Score=63.24 Aligned_cols=69 Identities=17% Similarity=0.185 Sum_probs=49.5
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCe-------------EEEEecCCcchhhhhhC--Cceee---ccCcc----cc
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQ-------------IYGQTMTADHHDELINM--GITPS---LKWTE----AT 140 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~-------------V~~~~R~~~~~~~l~~~--~i~~~---~~d~~----~~ 140 (272)
+|++|+|+|+|++|+.+++.|.+. ++++ |.+.++++++.+.+... +++.+ ..|.+ .+
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v 646 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYV 646 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhC-cCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhh
Confidence 578999999999999999999875 3444 77788877666655431 33323 23332 34
Q ss_pred CCCCEEEEecCC
Q 024143 141 QKFPYVIFCAPP 152 (272)
Q Consensus 141 ~~~D~Vi~~a~~ 152 (272)
+++|+||.|.++
T Consensus 647 ~~~DaVIsalP~ 658 (1042)
T PLN02819 647 SQVDVVISLLPA 658 (1042)
T ss_pred cCCCEEEECCCc
Confidence 689999999986
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.004 Score=57.01 Aligned_cols=64 Identities=16% Similarity=0.184 Sum_probs=37.6
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEE---EEecCCcchhhhhhCCceeeccC--ccccCCCCEEEEecC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIY---GQTMTADHHDELINMGITPSLKW--TEATQKFPYVIFCAP 151 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~---~~~R~~~~~~~l~~~~i~~~~~d--~~~~~~~D~Vi~~a~ 151 (272)
+|.|+|+ |++|+.|++.|.++ +|.+. .+.+....-..+.-.+.+....| .+.+.++|+||.|++
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~--~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~~~~~~~~D~v~~a~g 70 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEER--NFPIDKLVLLASDRSAGRKVTFKGKELEVNEAKIESFEGIDIALFSAG 70 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhC--CCChhhEEEEeccccCCCeeeeCCeeEEEEeCChHHhcCCCEEEECCC
Confidence 5889997 99999999999887 66544 44454333222221222222222 123456777776664
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0082 Score=54.85 Aligned_cols=69 Identities=13% Similarity=0.138 Sum_probs=39.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhc-CCCCeEEEEecCCcchhhhhhCCceeec--cCccccCCCCEEEEecC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTMTADHHDELINMGITPSL--KWTEATQKFPYVIFCAP 151 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~-~~g~~V~~~~R~~~~~~~l~~~~i~~~~--~d~~~~~~~D~Vi~~a~ 151 (272)
+|++|.|+|+ |++|+.|++.|.++ ||..++..+......-..+...+.+... .+.+.++++|+||.+.+
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~~~l~~~~~~~~~~~~vD~vFla~p 75 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAGKNLRVREVDSFDFSQVQLAFFAAG 75 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCCcceEEeeCChHHhcCCCEEEEcCC
Confidence 3578999997 99999999999975 3444555554432211111111111111 12223467888877765
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.045 Score=50.30 Aligned_cols=70 Identities=13% Similarity=0.043 Sum_probs=49.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhC-----Cceeec-cCccccCCCCEEEEecCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM-----GITPSL-KWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~-----~i~~~~-~d~~~~~~~D~Vi~~a~~~~ 154 (272)
+||.|+|+|.+|+.++-.|....-..++..++.++++.... ... ...... .|.+.++++|+||.+|+...
T Consensus 38 ~KI~IIGaG~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~~~~daDiVVitAG~~~ 117 (350)
T PLN02602 38 TKVSVVGVGNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYAVTAGSDLCIVTAGARQ 117 (350)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHHHhCCCCEEEECCCCCC
Confidence 59999999999999999998882223799999877654321 111 122222 24456899999999998643
|
|
| >PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.019 Score=55.38 Aligned_cols=66 Identities=15% Similarity=0.210 Sum_probs=49.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh-----------hhCC-------------ceeeccCcccc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL-----------INMG-------------ITPSLKWTEAT 140 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l-----------~~~~-------------i~~~~~d~~~~ 140 (272)
++|.|+|+|.+|+.++..|... |++|+..+++++..+.. ...| +... .+.+.+
T Consensus 8 ~~V~VIGaG~MG~gIA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~~~~~~ 84 (507)
T PRK08268 8 ATVAVIGAGAMGAGIAQVAAQA--GHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPV-EALADL 84 (507)
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEe-CCHHHh
Confidence 6899999999999999999999 99999999998766542 2223 1111 233456
Q ss_pred CCCCEEEEecCCC
Q 024143 141 QKFPYVIFCAPPS 153 (272)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (272)
.++|+||-++...
T Consensus 85 ~~aDlViEav~E~ 97 (507)
T PRK08268 85 ADCDLVVEAIVER 97 (507)
T ss_pred CCCCEEEEcCccc
Confidence 7999999988753
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.053 Score=61.38 Aligned_cols=34 Identities=9% Similarity=0.036 Sum_probs=29.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
.+.+||||+ +-||..++++|.+++ |++|+.+.|+
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~-ga~viL~gRs 2031 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQC-QAHFILAGRS 2031 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhc-CCEEEEEeCC
Confidence 457999985 999999999999872 4899999987
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0071 Score=55.45 Aligned_cols=66 Identities=15% Similarity=0.173 Sum_probs=38.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhc-CCCCeEEEEec--CCcchhhhhhCCceeec--cCccccCCCCEEEEecC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTM--TADHHDELINMGITPSL--KWTEATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~-~~g~~V~~~~R--~~~~~~~l~~~~i~~~~--~d~~~~~~~D~Vi~~a~ 151 (272)
.+||.|+|+ |++|+.|++.|.++ ||..++..+.. +..+.-.. .+.+... .+.+.+.++|+||.+++
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~--~~~~~~v~~~~~~~~~~~D~vf~a~p 78 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF--EGRDYTVEELTEDSFDGVDIALFSAG 78 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee--cCceeEEEeCCHHHHcCCCEEEECCC
Confidence 368999997 99999999999886 23334444433 32222111 1222222 12234567888887775
|
|
| >PRK05479 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0076 Score=54.80 Aligned_cols=68 Identities=16% Similarity=0.154 Sum_probs=50.7
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchh-hhhhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-ELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~-~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
+..++|.|+|.|.+|+.+++.|++. |++|++..|...+.. .....++... +. ++.+++|+|+.+.++.
T Consensus 15 L~gktIgIIG~GsmG~AlA~~L~~s--G~~Vvv~~r~~~~s~~~A~~~G~~~~--s~~eaa~~ADVVvLaVPd~ 84 (330)
T PRK05479 15 IKGKKVAIIGYGSQGHAHALNLRDS--GVDVVVGLREGSKSWKKAEADGFEVL--TVAEAAKWADVIMILLPDE 84 (330)
T ss_pred hCCCEEEEEeeHHHHHHHHHHHHHC--CCEEEEEECCchhhHHHHHHCCCeeC--CHHHHHhcCCEEEEcCCHH
Confidence 3447899999999999999999999 999998777644332 2223455433 32 5788999999999864
|
|
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0054 Score=65.60 Aligned_cols=67 Identities=12% Similarity=0.106 Sum_probs=56.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
++|-++|.|.+|..+++.|++. ||+|++.+|++++.+.+...|........++.+++|+||-|.+..
T Consensus 5 ~~IGfIGLG~MG~~mA~~L~~~--G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~ 71 (1378)
T PLN02858 5 GVVGFVGLDSLSFELASSLLRS--GFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHP 71 (1378)
T ss_pred CeEEEEchhHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCCh
Confidence 5799999999999999999999 999999999999888887777654432225678899999998754
|
|
| >PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups [] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.00024 Score=48.76 Aligned_cols=53 Identities=17% Similarity=0.089 Sum_probs=41.6
Q ss_pred ceeeecccCccccc----ccccccCCcchhhhcc-ccccccc--cccccceeccccccccc
Q 024143 3 TISCTNTVSLNGAC----TRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMA 56 (272)
Q Consensus 3 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~ 56 (272)
.+|+..++ ++... ++||++|++|+.+-++ -.+++++ ++|.+.+|..++...++
T Consensus 5 ~~~~~~l~-~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~i~~~~~~~~~ti~~l~ 64 (67)
T PF00550_consen 5 EIIAEVLG-VDPEEIDPDTDFFDLGLDSLDAIELVSELEEEFGIKIPPSDLFEHPTIRDLA 64 (67)
T ss_dssp HHHHHHHT-SSGGCTSTTSBTTTTTSSHHHHHHHHHHHHHHHTSSTTHHHHCTSSSHHHHH
T ss_pred HHHHHHHC-cCHhhCCCCCCHHHhCCchHHHHHHHHHHHHHHcCCCCHHHHHcCCCHHHHH
Confidence 46777776 33222 8999999999988899 9999998 78888888887766543
|
The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A .... |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.024 Score=54.13 Aligned_cols=69 Identities=17% Similarity=0.108 Sum_probs=51.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcc-----hhhhhhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~-----~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
..++|+|+|+|.+|..+++.|.++ |++|+++++.+.. ...+...|++...++. ....++|.||.+.+..
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~--G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~D~Vv~s~Gi~ 89 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLEL--GARVTVVDDGDDERHRALAAILEALGATVRLGPGPTLPEDTDLVVTSPGWR 89 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCccccCCCCEEEECCCcC
Confidence 446899999999999999999999 9999999865421 2335556877765442 2345789999887753
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.011 Score=48.56 Aligned_cols=67 Identities=16% Similarity=0.173 Sum_probs=51.7
Q ss_pred CeEEEEcCc-HHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC--C-ceeeccCc---c----c---cCCCCEEEEec
Q 024143 85 NDLLIVGPG-VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--G-ITPSLKWT---E----A---TQKFPYVIFCA 150 (272)
Q Consensus 85 ~~IlItGaG-fiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~--~-i~~~~~d~---~----~---~~~~D~Vi~~a 150 (272)
+.|++||+| -||+.+++.|.+. |.+|+++.|.+..+..|... + +++...|. + . ..-.|.++++|
T Consensus 8 ~~vlvTgagaGIG~~~v~~La~a--GA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNA 85 (245)
T KOG1207|consen 8 VIVLVTGAGAGIGKEIVLSLAKA--GAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNA 85 (245)
T ss_pred eEEEeecccccccHHHHHHHHhc--CCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccc
Confidence 579999984 5999999999999 99999999999888776543 2 56666664 1 1 23568888888
Q ss_pred CCC
Q 024143 151 PPS 153 (272)
Q Consensus 151 ~~~ 153 (272)
+..
T Consensus 86 gvA 88 (245)
T KOG1207|consen 86 GVA 88 (245)
T ss_pred hhh
Confidence 753
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0078 Score=54.88 Aligned_cols=66 Identities=18% Similarity=0.271 Sum_probs=49.1
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|+|.||+.+++.|... |++|++.+|.+...... +. ...+. ++++++|+|+.+.+...
T Consensus 144 l~g~~VgIIG~G~IG~~vA~~L~~~--G~~V~~~d~~~~~~~~~----~~-~~~~l~ell~~aDiVil~lP~t~ 210 (330)
T PRK12480 144 VKNMTVAIIGTGRIGAATAKIYAGF--GATITAYDAYPNKDLDF----LT-YKDSVKEAIKDADIISLHVPANK 210 (330)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCChhHhhhh----hh-ccCCHHHHHhcCCEEEEeCCCcH
Confidence 4456899999999999999999998 99999999986543211 11 11122 47789999988887543
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.041 Score=53.02 Aligned_cols=95 Identities=14% Similarity=0.093 Sum_probs=63.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeecc---C-------------cc--------
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK---W-------------TE-------- 138 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~---d-------------~~-------- 138 (272)
...+|+|+|+|.+|...+..+... |.+|+++++++++.+..+..|.+.... + .+
T Consensus 164 pg~kVlViGaG~iGL~Ai~~Ak~l--GA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 164 PPAKVLVIGAGVAGLAAIGAAGSL--GAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 456999999999999999999998 999999999998887777777663311 0 00
Q ss_pred ---ccCCCCEEEEecCCCCCCChHHHH-HHHHHHhcCCCeEEEEec
Q 024143 139 ---ATQKFPYVIFCAPPSRSLDYPGDV-RLAALSWNGEGSFLFTSS 180 (272)
Q Consensus 139 ---~~~~~D~Vi~~a~~~~~~~~~~~~-~~l~~~~~gvkr~V~~SS 180 (272)
...++|+||.|++...... ...+ +..+.....-..+|.++.
T Consensus 242 ~~~~~~gaDVVIetag~pg~~a-P~lit~~~v~~mkpGgvIVdvg~ 286 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPA-PKLITAEMVASMKPGSVIVDLAA 286 (509)
T ss_pred HHhccCCCCEEEECCCCCcccC-cchHHHHHHHhcCCCCEEEEEcc
Confidence 1257999999998643211 1121 333322223456777765
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0094 Score=53.93 Aligned_cols=66 Identities=18% Similarity=0.166 Sum_probs=49.1
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeecc--Cc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK--WT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~--d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|..- |++|++.+|.+...+ ++..... +. ++++++|+|+.+.+.+.
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~af--G~~V~~~~~~~~~~~-----~~~~~~~~~~l~e~l~~aDvvv~~lPlt~ 202 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTW--GFPLRCWSRSRKSWP-----GVQSFAGREELSAFLSQTRVLINLLPNTP 202 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCCCCCC-----CceeecccccHHHHHhcCCEEEECCCCCH
Confidence 3457999999999999999999998 999999998654432 1221111 11 46789999999888654
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.011 Score=48.58 Aligned_cols=58 Identities=14% Similarity=0.186 Sum_probs=44.7
Q ss_pred CcCCCeEEEEcCcH-HHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 81 GVGENDLLIVGPGV-LGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 81 ~~~~~~IlItGaGf-iG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
.+..++|+|+|+|- +|..+++.|.++ |.+|+...|+.+... +.+.++|+||.+.+...
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~--g~~V~v~~r~~~~l~--------------~~l~~aDiVIsat~~~~ 99 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNR--NATVTVCHSKTKNLK--------------EHTKQADIVIVAVGKPG 99 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhC--CCEEEEEECCchhHH--------------HHHhhCCEEEEcCCCCc
Confidence 35568999999985 699999999999 999999998743221 35667888888877543
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.009 Score=53.30 Aligned_cols=68 Identities=13% Similarity=0.125 Sum_probs=49.5
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhC------CceeeccCc--cccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM------GITPSLKWT--EATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~------~i~~~~~d~--~~~~~~D~Vi~~a~~ 152 (272)
..++|+|+|+|-.|+.++..|.+. |. +|+.++|+.++.+.+... .......+. +.+.++|+||+|-+.
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~--G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~ 202 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTL--GVERLTIFDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPT 202 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcC
Confidence 346899999999999999999999 87 899999998777665421 112211221 246789999999654
|
|
| >TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.024 Score=54.67 Aligned_cols=68 Identities=18% Similarity=0.164 Sum_probs=49.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh-----------hhCCc-e-----------eeccCcccc
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL-----------INMGI-T-----------PSLKWTEAT 140 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l-----------~~~~i-~-----------~~~~d~~~~ 140 (272)
.++|.|+|+|.+|+.++..|... |++|+..+|++++.+.. ...|. . ....+.+.+
T Consensus 5 ~~kV~VIGaG~MG~gIA~~la~a--G~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~~l 82 (503)
T TIGR02279 5 VVTVAVIGAGAMGAGIAQVAASA--GHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDLHAL 82 (503)
T ss_pred ccEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCHHHh
Confidence 46899999999999999999999 99999999997765431 12221 0 011233456
Q ss_pred CCCCEEEEecCCC
Q 024143 141 QKFPYVIFCAPPS 153 (272)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (272)
.++|.||-|+...
T Consensus 83 ~~aDlVIEav~E~ 95 (503)
T TIGR02279 83 ADAGLVIEAIVEN 95 (503)
T ss_pred CCCCEEEEcCcCc
Confidence 7999999998753
|
This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families. |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0089 Score=56.25 Aligned_cols=71 Identities=21% Similarity=0.257 Sum_probs=51.3
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhh-CCceeecc-Cc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-MGITPSLK-WT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~-~~i~~~~~-d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|+|+|+|-+|..+++.|... | .+|++++|+.++...+.. .+...... +. +.+.++|+||.|.+...
T Consensus 178 l~~~~VlViGaG~iG~~~a~~L~~~--G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 178 LKGKKALLIGAGEMGELVAKHLLRK--GVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEADIVISSTGAPH 252 (417)
T ss_pred ccCCEEEEECChHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCCEEEECCCCCC
Confidence 3447899999999999999999998 8 789999998776554432 23222211 11 35678999999876543
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.0079 Score=56.22 Aligned_cols=68 Identities=15% Similarity=0.186 Sum_probs=47.1
Q ss_pred cCCCeEEEEcC-----------------cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceee-ccCc------
Q 024143 82 VGENDLLIVGP-----------------GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-LKWT------ 137 (272)
Q Consensus 82 ~~~~~IlItGa-----------------GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~-~~d~------ 137 (272)
+..++|+|||. |.+|.+++++|.++ |++|+.++++.. ... ..++... ..+.
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~--Ga~V~~v~~~~~-~~~--~~~~~~~dv~~~~~~~~~ 260 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARR--GADVTLVSGPVN-LPT--PAGVKRIDVESAQEMLDA 260 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHC--CCEEEEeCCCcc-ccC--CCCcEEEccCCHHHHHHH
Confidence 45578999953 99999999999999 999999988653 111 1122221 1121
Q ss_pred --cccCCCCEEEEecCCCC
Q 024143 138 --EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 138 --~~~~~~D~Vi~~a~~~~ 154 (272)
+.+..+|++||+|+...
T Consensus 261 v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 261 VLAALPQADIFIMAAAVAD 279 (399)
T ss_pred HHHhcCCCCEEEEcccccc
Confidence 13457999999999644
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.019 Score=51.83 Aligned_cols=66 Identities=15% Similarity=0.164 Sum_probs=48.1
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhh----hhhC-------CceeeccCccccCCCCEEEEecCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-------GITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~----l~~~-------~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
||.|+|+|.+|+.++..|+.+ +. +++.++..+++... |... .+....+|.+.++++|+||.+|+.
T Consensus 1 Ki~IIGaG~VG~~~a~~l~~~--~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~ 78 (307)
T cd05290 1 KLVVIGAGHVGSAVLNYALAL--GLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGP 78 (307)
T ss_pred CEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCC
Confidence 688999999999999999888 64 79999987654322 2110 122233455689999999999986
Q ss_pred C
Q 024143 153 S 153 (272)
Q Consensus 153 ~ 153 (272)
.
T Consensus 79 ~ 79 (307)
T cd05290 79 S 79 (307)
T ss_pred C
Confidence 3
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.012 Score=55.32 Aligned_cols=71 Identities=15% Similarity=0.189 Sum_probs=53.9
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhC-C-ceeeccC--ccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM-G-ITPSLKW--TEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~-~-i~~~~~d--~~~~~~~D~Vi~~a~~~~ 154 (272)
...++|+|+|+|-.|+.+++.|.+. |. +|+...|+.++...+... + ......+ .+.+..+|+||+|.+...
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~--g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~~aDiVI~aT~a~~ 254 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTAL--APKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKKADIIIAAVNVLE 254 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhccCCEEEECcCCCC
Confidence 3457899999999999999999998 85 799999998877666542 2 2322222 146789999999988654
|
|
| >PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.011 Score=53.68 Aligned_cols=68 Identities=12% Similarity=0.160 Sum_probs=48.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC--Ccee-----------eccCc-ccc-CCCCEEEEe
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITP-----------SLKWT-EAT-QKFPYVIFC 149 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~--~i~~-----------~~~d~-~~~-~~~D~Vi~~ 149 (272)
|||.|+|+|-+|..++..|.+. |++|....|+++..+.+... +... ...|. +.. ..+|+||.+
T Consensus 1 MkI~IiGaGa~G~ala~~L~~~--g~~V~l~~r~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~Dliiia 78 (326)
T PRK14620 1 MKISILGAGSFGTAIAIALSSK--KISVNLWGRNHTTFESINTKRKNLKYLPTCHLPDNISVKSAIDEVLSDNATCIILA 78 (326)
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEecCHHHHHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHHhCCCCEEEEE
Confidence 4799999999999999999999 99999999987655544432 1110 01121 233 478999988
Q ss_pred cCCCC
Q 024143 150 APPSR 154 (272)
Q Consensus 150 a~~~~ 154 (272)
..+..
T Consensus 79 vks~~ 83 (326)
T PRK14620 79 VPTQQ 83 (326)
T ss_pred eCHHH
Confidence 87643
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.027 Score=54.37 Aligned_cols=71 Identities=13% Similarity=0.239 Sum_probs=52.3
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhC--Cce--eeccC-c-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM--GIT--PSLKW-T-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~--~i~--~~~~d-~-~~~~~~D~Vi~~a~~~~ 154 (272)
+..++|+|+|+|-+|+.+++.|... |. +|+++.|+.++...+... +.. ....+ . +.+.++|+||.|.+...
T Consensus 264 l~~kkVlVIGAG~mG~~~a~~L~~~--G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~~ 341 (519)
T PLN00203 264 HASARVLVIGAGKMGKLLVKHLVSK--GCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSET 341 (519)
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCCC
Confidence 4457999999999999999999998 86 799999998887666532 222 11222 1 46789999998765443
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.00057 Score=79.96 Aligned_cols=60 Identities=17% Similarity=0.130 Sum_probs=49.8
Q ss_pred CcceeeecccCcccc-cccccccCCcchhhhcc-ccccccc--cccccceeccccccccccccc
Q 024143 1 MGTISCTNTVSLNGA-CTRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNFQ 60 (272)
Q Consensus 1 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 60 (272)
++.||+.++..-.-. .++||++|||||+|-|| -++|+.+ +++.+.+|+.++...++..+.
T Consensus 1035 l~~i~~~vL~~~~i~~~d~Ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~lf~~~t~~~la~~~~ 1098 (3956)
T PRK12467 1035 LAAIWADVLKVERVGLTDNFFELGGHSLLATQVISRVRQRLGIQVPLRTLFEHQTLAGFAQAVA 1098 (3956)
T ss_pred HHHHHHHHhCCCCCCCCCCchhccCccHHHHHHHHHHHHHhCCCcchHHhhccchHHHHHHHhh
Confidence 367899999642211 29999999999999999 9999986 899999999999999887653
|
|
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.013 Score=41.66 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=31.0
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcc
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~ 121 (272)
||+|+|+|++|-.++..|.+. |.+|+.+.|.+.-
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~--g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAEL--GKEVTLIERSDRL 34 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHT--TSEEEEEESSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHh--CcEEEEEeccchh
Confidence 689999999999999999999 9999999997543
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0092 Score=52.60 Aligned_cols=68 Identities=16% Similarity=0.268 Sum_probs=53.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCC----CeEEEEecCCcchhhh-hhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTADHHDEL-INMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g----~~V~~~~R~~~~~~~l-~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
|++|.++|+|.+|+.|+.-|++. | .+|++..|++++...+ ...++.. ..|. +.....|+||.+.-|..
T Consensus 1 ~~~IgfIG~G~Mg~Ai~~gl~~~--g~~~~~~I~v~~~~~e~~~~l~~~~g~~~-~~~~~~~~~~advv~LavKPq~ 74 (266)
T COG0345 1 MMKIGFIGAGNMGEAILSGLLKS--GALPPEEIIVTNRSEEKRAALAAEYGVVT-TTDNQEAVEEADVVFLAVKPQD 74 (266)
T ss_pred CceEEEEccCHHHHHHHHHHHhc--CCCCcceEEEeCCCHHHHHHHHHHcCCcc-cCcHHHHHhhCCEEEEEeChHh
Confidence 57899999999999999999999 6 6899999998877533 3345552 2232 46778999999998743
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.061 Score=48.90 Aligned_cols=68 Identities=12% Similarity=0.127 Sum_probs=47.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCC-------eEEEEecCC--cchhh----hhhC------CceeeccCccccCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTA--DHHDE----LINM------GITPSLKWTEATQKFP 144 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~-------~V~~~~R~~--~~~~~----l~~~------~i~~~~~d~~~~~~~D 144 (272)
.||.|+|+ |.+|++++..|... +. +++.+++.+ ++... +... ++.....+.+.++++|
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~--~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD 81 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASG--ELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDVD 81 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhC--CcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCCC
Confidence 58999998 99999999999887 64 788888854 22221 1111 1222223346899999
Q ss_pred EEEEecCCCC
Q 024143 145 YVIFCAPPSR 154 (272)
Q Consensus 145 ~Vi~~a~~~~ 154 (272)
+||.+|+...
T Consensus 82 vVVitAG~~~ 91 (323)
T TIGR01759 82 AALLVGAFPR 91 (323)
T ss_pred EEEEeCCCCC
Confidence 9999999644
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.024 Score=54.19 Aligned_cols=70 Identities=17% Similarity=0.250 Sum_probs=53.2
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhh-hhhCCceeeccC--ccccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-LINMGITPSLKW--TEATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~-l~~~~i~~~~~d--~~~~~~~D~Vi~~a~~~ 153 (272)
+.+++|+|.|+|-.|..+++.|++. |++|++.++.+..... +...|++...+. .+.+.++|.||...+..
T Consensus 13 ~~~~~v~v~G~G~sG~a~a~~L~~~--G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi~ 85 (473)
T PRK00141 13 ELSGRVLVAGAGVSGRGIAAMLSEL--GCDVVVADDNETARHKLIEVTGVADISTAEASDQLDSFSLVVTSPGWR 85 (473)
T ss_pred ccCCeEEEEccCHHHHHHHHHHHHC--CCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHhcCCCEEEeCCCCC
Confidence 4567899999999999999999999 9999999987554433 234577665542 23466889999887754
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.01 Score=54.99 Aligned_cols=56 Identities=25% Similarity=0.269 Sum_probs=42.7
Q ss_pred CCCeEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 83 GENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
.+++|.|+| .|.+|+.+++.|.+. |++|++.+|++.. .. .+...++|+||.|.+..
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~--G~~V~~~d~~~~~--~~-----------~~~~~~aDlVilavP~~ 153 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLS--GYQVRILEQDDWD--RA-----------EDILADAGMVIVSVPIH 153 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHC--CCeEEEeCCCcch--hH-----------HHHHhcCCEEEEeCcHH
Confidence 347899998 799999999999999 9999999985321 00 13456778888888653
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.051 Score=49.73 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=31.0
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMT 118 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~ 118 (272)
+...+|+|+|+|.||+++++.|... |. +++.++.+
T Consensus 22 L~~~~VlVvG~GglGs~va~~La~a--Gvg~i~lvD~D 57 (339)
T PRK07688 22 LREKHVLIIGAGALGTANAEMLVRA--GVGKVTIVDRD 57 (339)
T ss_pred hcCCcEEEECCCHHHHHHHHHHHHc--CCCeEEEEeCC
Confidence 3446899999999999999999999 88 88888875
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.057 Score=48.53 Aligned_cols=66 Identities=17% Similarity=0.120 Sum_probs=47.7
Q ss_pred EEEEcCcHHHHHHHHHHHhcCCC--CeEEEEecCCcchhhhh----hC-----Cceeec-cCccccCCCCEEEEecCCCC
Q 024143 87 LLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELI----NM-----GITPSL-KWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 87 IlItGaGfiG~~l~~~L~~~~~g--~~V~~~~R~~~~~~~l~----~~-----~i~~~~-~d~~~~~~~D~Vi~~a~~~~ 154 (272)
|.|+|+|.+|+.++..|... | .+++.+++.+++..... .. ...... .|.+.+.++|+||.+++...
T Consensus 1 i~iiGaG~VG~~~a~~l~~~--~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~~~l~~aDiVIitag~p~ 78 (300)
T cd00300 1 ITIIGAGNVGAAVAFALIAK--GLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDYADAADADIVVITAGAPR 78 (300)
T ss_pred CEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCHHHhCCCCEEEEcCCCCC
Confidence 46899999999999999988 7 68999999876654322 11 112222 23357899999999998543
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK08605 D-lactate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.016 Score=52.89 Aligned_cols=67 Identities=15% Similarity=0.217 Sum_probs=47.4
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHH-hcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWR-QEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~-~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|. .- |.+|++.++.+.... . ..+.. ..+. ++++++|+|+.+++...
T Consensus 144 l~g~~VgIIG~G~IG~~vA~~L~~~~--g~~V~~~d~~~~~~~--~-~~~~~-~~~l~ell~~aDvIvl~lP~t~ 212 (332)
T PRK08605 144 IKDLKVAVIGTGRIGLAVAKIFAKGY--GSDVVAYDPFPNAKA--A-TYVDY-KDTIEEAVEGADIVTLHMPATK 212 (332)
T ss_pred eCCCEEEEECCCHHHHHHHHHHHhcC--CCEEEEECCCccHhH--H-hhccc-cCCHHHHHHhCCEEEEeCCCCc
Confidence 45579999999999999999994 45 889999988754321 1 11221 1122 46789999998887654
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.013 Score=53.37 Aligned_cols=66 Identities=15% Similarity=0.207 Sum_probs=52.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeecc--Ccc---cc-CCCCEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK--WTE---AT-QKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~--d~~---~~-~~~D~Vi~~a~ 151 (272)
..+|+|+|+|-+|...++.+... |.+|++++|++++.+...+.|.+.+.. |.+ .. +.+|+||.+++
T Consensus 167 G~~V~I~G~GGlGh~avQ~Aka~--ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~ 238 (339)
T COG1064 167 GKWVAVVGAGGLGHMAVQYAKAM--GAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDTVG 238 (339)
T ss_pred CCEEEEECCcHHHHHHHHHHHHc--CCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEECCC
Confidence 46899999999999888888888 999999999999987777777665542 232 22 23999999999
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.00067 Score=79.40 Aligned_cols=60 Identities=20% Similarity=0.119 Sum_probs=49.8
Q ss_pred CcceeeecccCccc-ccccccccCCcchhhhcc-ccccccc--cccccceeccccccccccccc
Q 024143 1 MGTISCTNTVSLNG-ACTRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNFQ 60 (272)
Q Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 60 (272)
|+.||+.++.--.- ..++||++|||||+|-|+ -++|+.+ ++|++.+|..+|...++..+.
T Consensus 3610 l~~i~~~vL~~~~i~~~d~Ff~lGgdSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~~ 3673 (3956)
T PRK12467 3610 LAAIWADVLGVEQVGVTDNFFELGGDSLLALQVLSRIRQSLGLKLSLRDLMSAPTIAELAGYSP 3673 (3956)
T ss_pred HHHHHHHHhCCCCCCCCcchhcccchHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHh
Confidence 46789999864211 129999999999999999 9999997 899999999999999987653
|
|
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.04 Score=50.52 Aligned_cols=91 Identities=18% Similarity=0.199 Sum_probs=53.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC-Ccchhhhhh-CCce----------------e-eccCc-cccCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELIN-MGIT----------------P-SLKWT-EATQKF 143 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~-~~~~~~l~~-~~i~----------------~-~~~d~-~~~~~~ 143 (272)
|.||.|.|+|.+|+.+++.+.+. ++.+|+++.-. ++....+.. .|.. . +..+. +.+.++
T Consensus 1 ~ikVaI~G~GrIGr~va~al~~~-~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v 79 (341)
T PRK04207 1 MIKVGVNGYGTIGKRVADAVAAQ-PDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA 79 (341)
T ss_pred CeEEEEECCCHHHHHHHHHHhcC-CCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence 56899999999999999988765 58899987643 221111111 1111 0 11122 245689
Q ss_pred CEEEEecCCCCCCChHHHHHHHHHHhcCCCeEEEEecc
Q 024143 144 PYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSS 181 (272)
Q Consensus 144 D~Vi~~a~~~~~~~~~~~~~~l~~~~~gvkr~V~~SS~ 181 (272)
|+||.|.++... .+..... .+.| +++|+-++.
T Consensus 80 DVVIdaT~~~~~---~e~a~~~--~~aG-k~VI~~~~~ 111 (341)
T PRK04207 80 DIVVDATPGGVG---AKNKELY--EKAG-VKAIFQGGE 111 (341)
T ss_pred CEEEECCCchhh---HHHHHHH--HHCC-CEEEEcCCC
Confidence 999999876432 1122222 2346 677777663
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.044 Score=42.15 Aligned_cols=93 Identities=14% Similarity=0.110 Sum_probs=51.6
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE-ecCCcchhhhhhC--Cceee---ccCccc--cCCCCEEEEecCCCCCC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELINM--GITPS---LKWTEA--TQKFPYVIFCAPPSRSL 156 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~-~R~~~~~~~l~~~--~i~~~---~~d~~~--~~~~D~Vi~~a~~~~~~ 156 (272)
||.|+|+ |.+|..+++.|.+. +++++.++ .|+.++.+.+... .+... ..+.+. ..++|+||.|.+....
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~- 78 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-PDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFEELAVDIVFLALPHGVS- 78 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-CCceEEEEEechhhcCcCHHHHCcccccccccccccCChhhcCCCEEEEcCCcHHH-
Confidence 5789996 99999999999884 38888888 4433222222111 11111 111111 2489999999887532
Q ss_pred ChHHHHHHHHHHhcCCCeEEEEecce
Q 024143 157 DYPGDVRLAALSWNGEGSFLFTSSSA 182 (272)
Q Consensus 157 ~~~~~~~~l~~~~~gvkr~V~~SS~~ 182 (272)
.+.+..+......-+.+|-+||+.
T Consensus 79 --~~~~~~~~~~~~~g~~viD~s~~~ 102 (122)
T smart00859 79 --KEIAPLLPKAAEAGVKVIDLSSAF 102 (122)
T ss_pred --HHHHHHHHhhhcCCCEEEECCccc
Confidence 222222221122335677777654
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.072 Score=47.79 Aligned_cols=66 Identities=15% Similarity=0.148 Sum_probs=46.2
Q ss_pred EEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhh----hhhC----C--ceee-ccCccccCCCCEEEEecCCCC
Q 024143 87 LLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDE----LINM----G--ITPS-LKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 87 IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~----l~~~----~--i~~~-~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
|.|+|+|.+|..++..|... +. +|+.++++++.... +... + .... ..|.+.++++|+||.+++...
T Consensus 1 I~IIGaG~vG~~ia~~la~~--~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~~~l~dADiVIit~g~p~ 78 (300)
T cd01339 1 ISIIGAGNVGATLAQLLALK--ELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDYEDIAGSDVVVITAGIPR 78 (300)
T ss_pred CEEECCCHHHHHHHHHHHhC--CCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCHHHhCCCCEEEEecCCCC
Confidence 46899999999999999887 76 99999998765321 1111 0 1111 133457889999999998543
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.031 Score=52.25 Aligned_cols=72 Identities=24% Similarity=0.356 Sum_probs=55.6
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhh-CCceeeccCc--cccCCCCEEEEecCCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-MGITPSLKWT--EATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~-~~i~~~~~d~--~~~~~~D~Vi~~a~~~~~ 155 (272)
+..+++||+|+|-+|.-+++.|.++ | .+|+...|+.++...+.. .+.+....+. +.+..+|+||-+-+...+
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~--g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVissTsa~~~ 251 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEK--GVKKITIANRTLERAEELAKKLGAEAVALEELLEALAEADVVISSTSAPHP 251 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhC--CCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEEEecCCCcc
Confidence 4557899999999999999999999 8 688999999888776653 3544443332 468899999988765443
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.032 Score=45.29 Aligned_cols=63 Identities=14% Similarity=0.149 Sum_probs=42.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-Cceeecc--CccccCCCCEEEEe
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLK--WTEATQKFPYVIFC 149 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i~~~~~--d~~~~~~~D~Vi~~ 149 (272)
..++|+|+|.|-+|...++.|++. |++|++++ ++..+++... .+.+... ..+.+.++|.||-+
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~--ga~V~VIs--p~~~~~l~~l~~i~~~~~~~~~~dl~~a~lViaa 77 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDT--GAFVTVVS--PEICKEMKELPYITWKQKTFSNDDIKDAHLIYAA 77 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEc--CccCHHHHhccCcEEEecccChhcCCCceEEEEC
Confidence 447899999999999999999999 99999884 4444444332 2222221 12346777877654
|
|
| >PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.013 Score=47.57 Aligned_cols=67 Identities=18% Similarity=0.195 Sum_probs=46.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc-chhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~-~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
..++|.|+|.|-.|..-+..|++. |++|+.-.|... ..+.-+..|.++.... ++.+.+|+|+.+.+.
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDS--G~~V~Vglr~~s~s~~~A~~~Gf~v~~~~-eAv~~aDvV~~L~PD 70 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDS--GVNVIVGLREGSASWEKAKADGFEVMSVA-EAVKKADVVMLLLPD 70 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHC--C-EEEEEE-TTCHHHHHHHHTT-ECCEHH-HHHHC-SEEEE-S-H
T ss_pred CCCEEEEECCChHHHHHHHHHHhC--CCCEEEEecCCCcCHHHHHHCCCeeccHH-HHHhhCCEEEEeCCh
Confidence 357999999999999999999999 999998888765 3344445677664322 578899999888764
|
This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C. |
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.019 Score=53.19 Aligned_cols=58 Identities=24% Similarity=0.288 Sum_probs=44.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC-ccccCCCCEEEEecCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW-TEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d-~~~~~~~D~Vi~~a~~~~ 154 (272)
.++|.|+|. |.+|+.+++.|.+.+ +++|++.++..+.. .+ .+.+.++|+||.|.+...
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~-~~~V~g~D~~d~~~------------~~~~~~v~~aDlVilavPv~~ 63 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRM-QLEVIGHDPADPGS------------LDPATLLQRADVLIFSAPIRH 63 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcC-CCEEEEEcCCcccc------------CCHHHHhcCCCEEEEeCCHHH
Confidence 479999998 999999999999753 89999998742110 11 135678999999998643
|
|
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.023 Score=54.52 Aligned_cols=69 Identities=23% Similarity=0.208 Sum_probs=52.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC----Cceee-c-cCc-c---ccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPS-L-KWT-E---ATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~----~i~~~-~-~d~-~---~~~~~D~Vi~~a~~ 152 (272)
.+.+|-++|.|.+|+.+++.|++. |++|.+.+|++++.+.+... |.... . .++ + .++++|+||-|.+.
T Consensus 5 ~~~~IG~IGLG~MG~~mA~nL~~~--G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~ 82 (493)
T PLN02350 5 ALSRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKA 82 (493)
T ss_pred CCCCEEEEeeHHHHHHHHHHHHhC--CCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCC
Confidence 456899999999999999999999 99999999999888776542 43211 1 122 2 23469999999875
Q ss_pred C
Q 024143 153 S 153 (272)
Q Consensus 153 ~ 153 (272)
.
T Consensus 83 ~ 83 (493)
T PLN02350 83 G 83 (493)
T ss_pred c
Confidence 4
|
|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.00077 Score=79.45 Aligned_cols=60 Identities=20% Similarity=0.145 Sum_probs=49.8
Q ss_pred CcceeeecccCcccc-cccccccCCcchhhhcc-ccccccc--cccccceeccccccccccccc
Q 024143 1 MGTISCTNTVSLNGA-CTRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNFQ 60 (272)
Q Consensus 1 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 60 (272)
|+.||+.++..-+-. .++||++|||||+|-|| -++|+.+ +++++.+|.+++...++..+.
T Consensus 1643 l~~iw~~vL~~~~i~~~d~Ff~lGGdSl~a~~l~~~~~~~~~~~l~~~~~f~~~tl~~la~~i~ 1706 (4334)
T PRK05691 1643 IAAIWREVLGLPRVGLRDDFFALGGHSLLATQIVSRTRQACDVELPLRALFEASELGAFAEQVA 1706 (4334)
T ss_pred HHHHHHHHhCCCCCCCCCchHHhcccHHHHHHHHHHHHHHhCCCcchhhhhcCCcHHHHHHHhh
Confidence 357899998642211 29999999999999999 8999876 899999999999999987653
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.018 Score=55.16 Aligned_cols=70 Identities=20% Similarity=0.273 Sum_probs=50.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-Cceeecc-CccccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLK-WTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i~~~~~-d~~~~~~~D~Vi~~a~~~~ 154 (272)
..++++|+|+|-+|+.++..|.+. |++|+...|+.++.+.+... +...... +...+.++|+||+|.+...
T Consensus 331 ~~k~vlIiGaGgiG~aia~~L~~~--G~~V~i~~R~~~~~~~la~~~~~~~~~~~~~~~l~~~DiVInatP~g~ 402 (477)
T PRK09310 331 NNQHVAIVGAGGAAKAIATTLARA--GAELLIFNRTKAHAEALASRCQGKAFPLESLPELHRIDIIINCLPPSV 402 (477)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhccceechhHhcccCCCCEEEEcCCCCC
Confidence 457899999999999999999999 99999999987766554321 1111111 1223568999999987643
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.016 Score=53.14 Aligned_cols=71 Identities=17% Similarity=0.218 Sum_probs=48.3
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCCce------eeccCc-cccCCCCEEEEec
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMGIT------PSLKWT-EATQKFPYVIFCA 150 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~i~------~~~~d~-~~~~~~D~Vi~~a 150 (272)
...++|.|+|.|-||+.+++.|..- |.+|++.+|......... ..... ....+. +++..+|+|+.+.
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~af--G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPF--GVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhC--CCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 4568999999999999999999998 999999998643211100 00000 001111 4678999999888
Q ss_pred CCCC
Q 024143 151 PPSR 154 (272)
Q Consensus 151 ~~~~ 154 (272)
+...
T Consensus 235 Plt~ 238 (347)
T PLN02928 235 TLTK 238 (347)
T ss_pred CCCh
Confidence 7543
|
|
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.022 Score=50.25 Aligned_cols=67 Identities=18% Similarity=0.258 Sum_probs=42.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCccc-cCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWTEA-TQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~~~-~~~~D~Vi~~a~~ 152 (272)
|+||.|+|+|.+|+.+++.|.+. ++.++.++............ .++.. ..|.+. ..++|+|+.|+++
T Consensus 1 m~rVgIiG~G~iG~~~~~~l~~~-~~~~l~~v~~~~~~~~~~~~~~~~~~~~-~~d~~~l~~~~DvVve~t~~ 71 (265)
T PRK13303 1 MMKVAMIGFGAIGAAVLELLEHD-PDLRVDWVIVPEHSIDAVRRALGEAVRV-VSSVDALPQRPDLVVECAGH 71 (265)
T ss_pred CcEEEEECCCHHHHHHHHHHhhC-CCceEEEEEEcCCCHHHHhhhhccCCee-eCCHHHhccCCCEEEECCCH
Confidence 57999999999999999998775 46777766533222211111 12222 223222 3568999999876
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.019 Score=53.17 Aligned_cols=68 Identities=19% Similarity=0.164 Sum_probs=49.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-Ccee--eccCc----cccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITP--SLKWT----EATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i~~--~~~d~----~~~~~~D~Vi~~a~~ 152 (272)
...+|+|+|+|-+|...++.+... |.+|++++|++++.+.+... +... ...+. +.+.++|+||.++..
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~l--Ga~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGL--GATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLI 240 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence 346799999999999999999999 99999999987776554332 2211 11111 356789999998854
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.024 Score=51.29 Aligned_cols=66 Identities=17% Similarity=0.167 Sum_probs=47.8
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|-||+.+++.+..= |.+|.+.+|..... ..++.....+ +.++.+|+|+.+++.+.
T Consensus 143 L~gktvGIiG~G~IG~~vA~~~~~f--gm~V~~~d~~~~~~----~~~~~~~~l~-ell~~sDvv~lh~Plt~ 208 (311)
T PRK08410 143 IKGKKWGIIGLGTIGKRVAKIAQAF--GAKVVYYSTSGKNK----NEEYERVSLE-ELLKTSDIISIHAPLNE 208 (311)
T ss_pred cCCCEEEEECCCHHHHHHHHHHhhc--CCEEEEECCCcccc----ccCceeecHH-HHhhcCCEEEEeCCCCc
Confidence 4568999999999999999999887 99999999864321 1222222112 57788999987777543
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.054 Score=49.57 Aligned_cols=36 Identities=31% Similarity=0.410 Sum_probs=31.1
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA 119 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~ 119 (272)
+...+|+|+|+|-+|+++++.|... |+ +++.++++.
T Consensus 22 L~~~~VlIiG~GglGs~va~~La~a--Gvg~i~lvD~D~ 58 (338)
T PRK12475 22 IREKHVLIVGAGALGAANAEALVRA--GIGKLTIADRDY 58 (338)
T ss_pred hcCCcEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCc
Confidence 3456899999999999999999999 98 888888863
|
|
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.047 Score=51.95 Aligned_cols=68 Identities=15% Similarity=0.218 Sum_probs=51.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcch-----hhhhhCCceeeccCc--cccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH-----DELINMGITPSLKWT--EATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~-----~~l~~~~i~~~~~d~--~~~~~~D~Vi~~a~~ 152 (272)
..++|+|+|.|-.|..+++.|.+. |++|++.++.+... ..+...|+....++. +.+.++|.||...+.
T Consensus 13 ~~~~i~v~G~G~sG~a~a~~L~~~--G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~dlVV~Spgi 87 (458)
T PRK01710 13 KNKKVAVVGIGVSNIPLIKFLVKL--GAKVTAFDKKSEEELGEVSNELKELGVKLVLGENYLDKLDGFDVIFKTPSM 87 (458)
T ss_pred cCCeEEEEcccHHHHHHHHHHHHC--CCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCChHHhccCCEEEECCCC
Confidence 357899999999999999999999 99999999864311 235556777665432 345789999988654
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.045 Score=46.34 Aligned_cols=67 Identities=19% Similarity=0.114 Sum_probs=45.5
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhhhhhCC-ceeecc--CccccCCCCEEEEecC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMG-ITPSLK--WTEATQKFPYVIFCAP 151 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~l~~~~-i~~~~~--d~~~~~~~D~Vi~~a~ 151 (272)
..++|+|+|+|-+|...++.|++. |++|+++.+.... ...+...+ +..... ....+.++|+||-+..
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~--ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~ 79 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKY--GAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATN 79 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCC
Confidence 457999999999999999999999 9999998765322 23332222 333222 1235678887766543
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.024 Score=51.10 Aligned_cols=65 Identities=26% Similarity=0.300 Sum_probs=47.9
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|..- |++|++.+|+... .+......+. +.+.++|+|+.+.+...
T Consensus 120 L~gktvgIiG~G~IG~~vA~~l~af--G~~V~~~~r~~~~------~~~~~~~~~l~ell~~aDiv~~~lp~t~ 185 (303)
T PRK06436 120 LYNKSLGILGYGGIGRRVALLAKAF--GMNIYAYTRSYVN------DGISSIYMEPEDIMKKSDFVLISLPLTD 185 (303)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcc------cCcccccCCHHHHHhhCCEEEECCCCCc
Confidence 4568999999999999999988888 9999999986432 1221111122 46788999988887654
|
|
| >PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.011 Score=54.06 Aligned_cols=68 Identities=19% Similarity=0.219 Sum_probs=48.0
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCc---------e----e-eccCc-cccCCCCEEE
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI---------T----P-SLKWT-EATQKFPYVI 147 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i---------~----~-~~~d~-~~~~~~D~Vi 147 (272)
.|+||.|+|+|.+|..++..|.+. | +|+...|+++..+.+...+. . . ...|. ++++++|+||
T Consensus 6 ~~mkI~IiGaGa~G~alA~~La~~--g-~v~l~~~~~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~a~~~aDlVi 82 (341)
T PRK12439 6 REPKVVVLGGGSWGTTVASICARR--G-PTLQWVRSAETADDINDNHRNSRYLGNDVVLSDTLRATTDFAEAANCADVVV 82 (341)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--C-CEEEEeCCHHHHHHHHhcCCCcccCCCCcccCCCeEEECCHHHHHhcCCEEE
Confidence 457899999999999999999998 7 67777887766655543221 0 0 11122 3567899999
Q ss_pred EecCCC
Q 024143 148 FCAPPS 153 (272)
Q Consensus 148 ~~a~~~ 153 (272)
.+.++.
T Consensus 83 lavps~ 88 (341)
T PRK12439 83 MGVPSH 88 (341)
T ss_pred EEeCHH
Confidence 988753
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.032 Score=49.85 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=31.3
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCe-EEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTA 119 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~-V~~~~R~~ 119 (272)
..++++|+|+|-+|+.++..|.+. |++ |+++.|+.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~--G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALD--GAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCc
Confidence 346899999999999999999999 986 99999986
|
|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.04 Score=52.97 Aligned_cols=69 Identities=16% Similarity=0.166 Sum_probs=53.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC--ccccCCCCEEEEecCCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW--TEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d--~~~~~~~D~Vi~~a~~~~ 154 (272)
.++|+|+|.|-.|...++.|.+. |++|++.++.+...+.+...++.....+ .+.+.++|.||.+.+...
T Consensus 12 ~~~v~V~G~G~sG~aa~~~L~~~--G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~~ 82 (488)
T PRK03369 12 GAPVLVAGAGVTGRAVLAALTRF--GARPTVCDDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPGFRP 82 (488)
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHhCCCEEEcCcchHhHhhcCCEEEECCCCCC
Confidence 36899999999999999999999 9999999977655555555577665432 234668899999887543
|
|
| >TIGR01921 DAP-DH diaminopimelate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.027 Score=51.07 Aligned_cols=64 Identities=22% Similarity=0.299 Sum_probs=43.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEE-ecCC-cchhhhhhCCceeec-cCc-cccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQ-TMTA-DHHDELINMGITPSL-KWT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~-~R~~-~~~~~l~~~~i~~~~-~d~-~~~~~~D~Vi~~a~~ 152 (272)
+.||.|+|+|.+|+.+++.+.+. ++.+++++ +|++ ++.. ..+..+. .|. +...++|+|++|.+.
T Consensus 3 kIRVgIVG~GnIGr~~a~al~~~-pd~ELVgV~dr~~~~~~~----~~~~v~~~~d~~e~l~~iDVViIctPs 70 (324)
T TIGR01921 3 KIRAAIVGYGNLGRSVEKAIQQQ-PDMELVGVFSRRGAETLD----TETPVYAVADDEKHLDDVDVLILCMGS 70 (324)
T ss_pred CcEEEEEeecHHHHHHHHHHHhC-CCcEEEEEEcCCcHHHHh----hcCCccccCCHHHhccCCCEEEEcCCC
Confidence 36899999999999999988765 58999976 5553 2221 1122221 122 345789999999764
|
This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.047 Score=51.56 Aligned_cols=68 Identities=16% Similarity=0.161 Sum_probs=49.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcc----hhhhhhCCceeeccC-c-cccC-CCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH----HDELINMGITPSLKW-T-EATQ-KFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~----~~~l~~~~i~~~~~d-~-~~~~-~~D~Vi~~a~~~ 153 (272)
.++|+|+|.|-+|...++.|.+. |++|++.++.... ...+...++....+. . +... ++|.||...+..
T Consensus 5 ~k~v~v~G~g~~G~s~a~~l~~~--G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~ 79 (447)
T PRK02472 5 NKKVLVLGLAKSGYAAAKLLHKL--GANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLELLDEDFDLMVKNPGIP 79 (447)
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC--CCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHHHhcCcCCEEEECCCCC
Confidence 46899999877999999999999 9999999876432 133445566665432 2 2234 389999988753
|
|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.0011 Score=79.10 Aligned_cols=58 Identities=12% Similarity=0.043 Sum_probs=47.8
Q ss_pred CcceeeecccCccc-ccccccccCCcchhhhcc-cccccc-ccccccceeccccccccccc
Q 024143 1 MGTISCTNTVSLNG-ACTRFFAADSLSSKASSV-FFNNRT-WKLKLRPLVASSSSSSMATN 58 (272)
Q Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 58 (272)
|+.||+.++..-.- ..++||++|||||+|-|+ -++|+. ++++...+|+.++...++..
T Consensus 3561 l~~iw~~vL~~~~i~~~d~Ff~lGGdSl~a~~l~~~~~~~g~~~~~~~~f~~~ti~~la~~ 3621 (5163)
T PRK12316 3561 LAAIWADVLKLEQVGLTDNFFELGGDSIISLQVVSRARQAGIRFTPKDLFQHQTIQGLARV 3621 (5163)
T ss_pred HHHHHHHHhCCCCCCCCCCchhcCCccHHHHHHHHHHHHcCCCCCHHHHhcCCCHHHHHHH
Confidence 46799999864211 128999999999999999 888887 68899999999999999864
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.032 Score=53.64 Aligned_cols=67 Identities=15% Similarity=0.151 Sum_probs=51.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------------------------
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT------------------------- 137 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~------------------------- 137 (272)
...+++|+|+|.+|...+..+... |.+|+++++++++.+..+..+.+.+..|.
T Consensus 163 p~akVlViGaG~iGl~Aa~~ak~l--GA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 163 PPAKVLVIGAGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 446999999999999999999999 99999999988777666555554422110
Q ss_pred --cccCCCCEEEEecC
Q 024143 138 --EATQKFPYVIFCAP 151 (272)
Q Consensus 138 --~~~~~~D~Vi~~a~ 151 (272)
+..+++|+||.|+-
T Consensus 241 ~~e~~~~~DIVI~Tal 256 (511)
T TIGR00561 241 FAAQAKEVDIIITTAL 256 (511)
T ss_pred HHHHhCCCCEEEECcc
Confidence 13568999999993
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.027 Score=50.91 Aligned_cols=67 Identities=16% Similarity=0.217 Sum_probs=50.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCcee-ec------------cCc-cccCCCCEEEEe
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-SL------------KWT-EATQKFPYVIFC 149 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~-~~------------~d~-~~~~~~D~Vi~~ 149 (272)
|++|.|+|+|--|++|+..|.++ ||+|+...|+++....+....... +. .|. ++++++|+|+..
T Consensus 1 ~~kI~ViGaGswGTALA~~la~n--g~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~a 78 (329)
T COG0240 1 MMKIAVIGAGSWGTALAKVLARN--GHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIA 78 (329)
T ss_pred CceEEEEcCChHHHHHHHHHHhc--CCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEE
Confidence 47899999999999999999999 999999999987766654431111 11 111 356779999888
Q ss_pred cCC
Q 024143 150 APP 152 (272)
Q Consensus 150 a~~ 152 (272)
.+.
T Consensus 79 vPs 81 (329)
T COG0240 79 VPS 81 (329)
T ss_pred CCh
Confidence 774
|
|
| >PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.017 Score=58.14 Aligned_cols=67 Identities=16% Similarity=0.321 Sum_probs=50.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCC--CeEEEEecCCcchhhhhhCCcee-eccCc-cccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELINMGITP-SLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g--~~V~~~~R~~~~~~~l~~~~i~~-~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
++|.|+|+|.+|..+++.|.+. | ++|++.+|++++.+.....++.. ...+. +++.++|+||.|.++.
T Consensus 4 ~~I~IIG~G~mG~ala~~l~~~--G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~ 74 (735)
T PRK14806 4 GRVVVIGLGLIGGSFAKALRER--GLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVL 74 (735)
T ss_pred cEEEEEeeCHHHHHHHHHHHhc--CCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHH
Confidence 6899999999999999999998 7 58999999887766554455421 11121 3567899999999864
|
|
| >PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.024 Score=55.04 Aligned_cols=68 Identities=16% Similarity=0.224 Sum_probs=50.9
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|..- |++|++.+|..... .....+++.. +. +.++.+|+|+.+.+...
T Consensus 138 l~gktvgIiG~G~IG~~vA~~l~~f--G~~V~~~d~~~~~~-~~~~~g~~~~--~l~ell~~aDiV~l~lP~t~ 206 (526)
T PRK13581 138 LYGKTLGIIGLGRIGSEVAKRAKAF--GMKVIAYDPYISPE-RAAQLGVELV--SLDELLARADFITLHTPLTP 206 (526)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEECCCCChh-HHHhcCCEEE--cHHHHHhhCCEEEEccCCCh
Confidence 4567999999999999999999998 99999999864321 1223455444 22 56789999988887643
|
|
| >PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.023 Score=54.03 Aligned_cols=68 Identities=15% Similarity=0.149 Sum_probs=51.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
.++|+|+|.|-.|..+++.|.+. |++|.+.++.+.....+...|++....+.+.+.++|.||...+..
T Consensus 9 ~~~i~viG~G~~G~~~a~~l~~~--G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~~~d~vv~sp~i~ 76 (460)
T PRK01390 9 GKTVAVFGLGGSGLATARALVAG--GAEVIAWDDNPASRAKAAAAGITTADLRTADWSGFAALVLSPGVP 76 (460)
T ss_pred CCEEEEEeecHhHHHHHHHHHHC--CCEEEEECCChhhHHHHHhcCccccCCChhHHcCCCEEEECCCCC
Confidence 46899999999999999999999 999999997654444455556654433333456889999887653
|
|
| >PTZ00431 pyrroline carboxylate reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.02 Score=50.29 Aligned_cols=62 Identities=15% Similarity=0.168 Sum_probs=44.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCC----CeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g----~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
+||.|+|+|.+|+.+++.|.+. + .+|++.+|++++. +......+.+..+++|+||.|..+..
T Consensus 4 mkI~iIG~G~mG~ai~~~l~~~--~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~D~Vilavkp~~ 69 (260)
T PTZ00431 4 IRVGFIGLGKMGSALAYGIENS--NIIGKENIYYHTPSKKNT------PFVYLQSNEELAKTCDIIVLAVKPDL 69 (260)
T ss_pred CEEEEECccHHHHHHHHHHHhC--CCCCcceEEEECCChhcC------CeEEeCChHHHHHhCCEEEEEeCHHH
Confidence 5899999999999999999987 5 3588888865442 22222112235678999999977644
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.11 Score=47.34 Aligned_cols=70 Identities=11% Similarity=0.100 Sum_probs=47.1
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCC-------eEEEEecCCc--chh----hhhhC------CceeeccCccccCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTAD--HHD----ELINM------GITPSLKWTEATQK 142 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~-------~V~~~~R~~~--~~~----~l~~~------~i~~~~~d~~~~~~ 142 (272)
.+.||.|+|+ |.+|+.++-.|... +. ++..+++.++ +.. .+... .+.....+.+.+++
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~--~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~d 80 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASG--DMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKD 80 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhh--hhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCC
Confidence 3469999998 99999999998876 43 7888888543 221 11111 12222233368899
Q ss_pred CCEEEEecCCCC
Q 024143 143 FPYVIFCAPPSR 154 (272)
Q Consensus 143 ~D~Vi~~a~~~~ 154 (272)
+|+||.+|+...
T Consensus 81 aDiVVitaG~~~ 92 (326)
T PRK05442 81 ADVALLVGARPR 92 (326)
T ss_pred CCEEEEeCCCCC
Confidence 999999998643
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.014 Score=47.89 Aligned_cols=48 Identities=23% Similarity=0.402 Sum_probs=37.1
Q ss_pred CCcCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCC
Q 024143 80 GGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG 129 (272)
Q Consensus 80 ~~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~ 129 (272)
...+..+|+|+|+|.+|..-++.+... |++|+..+..+.+...+...+
T Consensus 16 ~~~~p~~vvv~G~G~vg~gA~~~~~~l--Ga~v~~~d~~~~~~~~~~~~~ 63 (168)
T PF01262_consen 16 GGVPPAKVVVTGAGRVGQGAAEIAKGL--GAEVVVPDERPERLRQLESLG 63 (168)
T ss_dssp TEE-T-EEEEESTSHHHHHHHHHHHHT--T-EEEEEESSHHHHHHHHHTT
T ss_pred CCCCCeEEEEECCCHHHHHHHHHHhHC--CCEEEeccCCHHHHHhhhccc
Confidence 334557999999999999999999999 999999999877665554443
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK12409 D-amino acid dehydrogenase small subunit; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.015 Score=54.18 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=31.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
|.+|+|+|+|++|..++.+|.++ |++|+++.|+.
T Consensus 1 ~~~vvIIGaG~~G~~~A~~La~~--g~~V~vle~~~ 34 (410)
T PRK12409 1 MSHIAVIGAGITGVTTAYALAQR--GYQVTVFDRHR 34 (410)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCC
Confidence 56999999999999999999999 99999999874
|
|
| >TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.05 Score=51.97 Aligned_cols=65 Identities=18% Similarity=0.294 Sum_probs=49.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---C--ceeeccCc-c---ccCCCCEEEEecCCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---G--ITPSLKWT-E---ATQKFPYVIFCAPPS 153 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~--i~~~~~d~-~---~~~~~D~Vi~~a~~~ 153 (272)
+|.|+|.|.+|+.+++.|.+. |++|++.+|++++.+.+... + +.... +. + .++++|+||.|+.+.
T Consensus 1 ~IG~IGLG~MG~~mA~nL~~~--G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~-s~~e~v~~l~~~dvIil~v~~~ 74 (467)
T TIGR00873 1 DIGVIGLAVMGSNLALNMADH--GFTVSVYNRTPEKTDEFLAEHAKGKKIVGAY-SIEEFVQSLERPRKIMLMVKAG 74 (467)
T ss_pred CEEEEeeHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHhhccCCCCceecC-CHHHHHhhcCCCCEEEEECCCc
Confidence 378999999999999999999 99999999999888776543 1 22211 21 2 345789999998764
|
This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason. |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.013 Score=52.79 Aligned_cols=66 Identities=26% Similarity=0.340 Sum_probs=50.6
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccC---c----cccCCCCEEEEecCCC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKW---T----EATQKFPYVIFCAPPS 153 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d---~----~~~~~~D~Vi~~a~~~ 153 (272)
.++|-|+ ||.|..++++|..+ |.+-....|+..++..+.. .|.+...++ + +.+.+.++|+||++|.
T Consensus 8 d~iiYGAtGy~G~lvae~l~~~--g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPy 82 (382)
T COG3268 8 DIIIYGATGYAGGLVAEYLARE--GLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPY 82 (382)
T ss_pred eEEEEccccchhHHHHHHHHHc--CCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEeccccc
Confidence 5788898 99999999999999 9988777898888876543 344333322 2 2467899999999984
|
|
| >PRK13301 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.014 Score=51.21 Aligned_cols=67 Identities=19% Similarity=0.197 Sum_probs=43.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcC-CCCeEEEEecC-CcchhhhhhCCceeeccCccc--cCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEH-PGCQIYGQTMT-ADHHDELINMGITPSLKWTEA--TQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~-~g~~V~~~~R~-~~~~~~l~~~~i~~~~~d~~~--~~~~D~Vi~~a~~ 152 (272)
.+||.|+|+|.||+.|+++|.+.. .++++.++.+. +++.+.+... .. ...+.+. ..++|+|+-||++
T Consensus 2 ~~rvgiIG~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~~~~-~~-~~~~l~~ll~~~~DlVVE~A~~ 72 (267)
T PRK13301 2 THRIAFIGLGAIASDVAAGLLADAAQPCQLAALTRNAADLPPALAGR-VA-LLDGLPGLLAWRPDLVVEAAGQ 72 (267)
T ss_pred ceEEEEECccHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHhhcc-Cc-ccCCHHHHhhcCCCEEEECCCH
Confidence 368999999999999999997651 24677766554 3444444322 22 1223332 4678888888875
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.031 Score=51.10 Aligned_cols=35 Identities=17% Similarity=0.393 Sum_probs=28.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhc-CCCCeEEEEecC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTMT 118 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~-~~g~~V~~~~R~ 118 (272)
.++|.|+|+ |++|+.|++.|.++ ||..++..+...
T Consensus 4 ~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~ 40 (336)
T PRK08040 4 GWNIALLGATGAVGEALLELLAERQFPVGELYALASE 40 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence 368999997 99999999988875 667787777554
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.016 Score=45.11 Aligned_cols=66 Identities=27% Similarity=0.392 Sum_probs=40.0
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE-ecCCcch-----hhhh---hCCceeeccCc-cccCCCCEEEEecCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHH-----DELI---NMGITPSLKWT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~-~R~~~~~-----~~l~---~~~i~~~~~d~-~~~~~~D~Vi~~a~~ 152 (272)
+||.|.|+ |.+|+.+++.+.+. +++++.+. +|.++.. ..+. ..++... .|. +.+..+|+||....+
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~-~~l~~~~~~~DVvIDfT~p 77 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT-DDLEELLEEADVVIDFTNP 77 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB-S-HHHHTTH-SEEEEES-H
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCCcccccchhhhhhCcCCcccccc-hhHHHhcccCCEEEEcCCh
Confidence 48999998 99999999999984 38887755 5554211 1111 1112111 222 356679999988744
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.026 Score=51.11 Aligned_cols=69 Identities=19% Similarity=0.173 Sum_probs=48.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC----Cceeecc-Cc-cccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPSLK-WT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~----~i~~~~~-d~-~~~~~~D~Vi~~a~~ 152 (272)
.++|+|+|+|..|+..++.+....+..+|++.+|++++...+... +...... +. +++.++|+|+.|-+.
T Consensus 125 ~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s 199 (314)
T PRK06141 125 ASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLS 199 (314)
T ss_pred CceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCC
Confidence 368999999999999998777633367999999998876655432 3222222 22 467899998655553
|
|
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.022 Score=48.69 Aligned_cols=67 Identities=21% Similarity=0.208 Sum_probs=40.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCe-EEEEecCCcchhhhhhC-CceeeccCc-cccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELINM-GITPSLKWT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~-V~~~~R~~~~~~~l~~~-~i~~~~~d~-~~~~~~D~Vi~~a~~ 152 (272)
++|.|+|+|.||..|++.+.+...+.+ |.+.+|++++...+... +.... .+. +.+.++|.|+-||++
T Consensus 1 l~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~-s~ide~~~~~DlvVEaAS~ 70 (255)
T COG1712 1 LKVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCV-SDIDELIAEVDLVVEAASP 70 (255)
T ss_pred CeEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCcc-ccHHHHhhccceeeeeCCH
Confidence 478999999999999997765422344 44567777777655432 11111 222 233566666666654
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.1 Score=46.91 Aligned_cols=64 Identities=17% Similarity=0.156 Sum_probs=45.4
Q ss_pred EEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhh----hhh------CCceeeccCccccCCCCEEEEecCCCC
Q 024143 89 IVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN------MGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 89 ItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~----l~~------~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
|+|+|.+|++++..|... +. ++..+++.+++... +.. ..+.....|.+.++++|+||.+|+...
T Consensus 1 iIGaG~VG~~~a~~l~~~--~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDivVitag~~r 76 (299)
T TIGR01771 1 IIGAGNVGSSTAFALLNQ--GIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSGDYSDCKDADLVVITAGAPQ 76 (299)
T ss_pred CCCcCHHHHHHHHHHHhc--CCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecCCHHHHCCCCEEEECCCCCC
Confidence 679999999999999887 54 79999987665432 111 112222234468999999999999643
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.036 Score=49.36 Aligned_cols=70 Identities=16% Similarity=0.121 Sum_probs=51.0
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhC-----Cceeecc-C-c-cccCCCCEEEEecCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM-----GITPSLK-W-T-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~-----~i~~~~~-d-~-~~~~~~D~Vi~~a~~~ 153 (272)
..++++|+|+|-.|+.++..|.+. |. +|+++.|+.++.+.+... .+..... + . +.+.++|+||+|.+..
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~--G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASL--GVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD 201 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence 346899999999999999999999 86 799999998877666431 1111111 1 1 3456899999998765
Q ss_pred C
Q 024143 154 R 154 (272)
Q Consensus 154 ~ 154 (272)
.
T Consensus 202 ~ 202 (282)
T TIGR01809 202 V 202 (282)
T ss_pred C
Confidence 4
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.033 Score=50.64 Aligned_cols=69 Identities=17% Similarity=0.079 Sum_probs=48.2
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHH-hcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWR-QEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~-~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
...+++.|+|.|.||+.+++.+. .- |.+|.+.+|...... ....+++....+ +.++.+|+|+.+.+.+.
T Consensus 143 L~gktvGIiG~G~IG~~va~~l~~~f--gm~V~~~~~~~~~~~-~~~~~~~~~~l~-ell~~sDvv~lh~plt~ 212 (323)
T PRK15409 143 VHHKTLGIVGMGRIGMALAQRAHFGF--NMPILYNARRHHKEA-EERFNARYCDLD-TLLQESDFVCIILPLTD 212 (323)
T ss_pred CCCCEEEEEcccHHHHHHHHHHHhcC--CCEEEEECCCCchhh-HHhcCcEecCHH-HHHHhCCEEEEeCCCCh
Confidence 45689999999999999999997 56 899998887643211 112334332112 57889999987777543
|
|
| >PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.073 Score=50.67 Aligned_cols=70 Identities=17% Similarity=0.266 Sum_probs=52.5
Q ss_pred cCCCeEEEEcCcHHHHH-HHHHHHhcCCCCeEEEEecCCc-chhhhhhCCceeeccC-ccccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGPGVLGRL-VAEQWRQEHPGCQIYGQTMTAD-HHDELINMGITPSLKW-TEATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~-l~~~L~~~~~g~~V~~~~R~~~-~~~~l~~~~i~~~~~d-~~~~~~~D~Vi~~a~~~ 153 (272)
..+++|+|+|.|-.|.. +++.|.++ |++|++.+..+. ....+...++..+.+. .+.+.++|.||..-+..
T Consensus 5 ~~~~~v~viG~G~sG~s~~a~~L~~~--G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~~d~vv~spgi~ 77 (461)
T PRK00421 5 RRIKRIHFVGIGGIGMSGLAEVLLNL--GYKVSGSDLKESAVTQRLLELGAIIFIGHDAENIKDADVVVYSSAIP 77 (461)
T ss_pred CCCCEEEEEEEchhhHHHHHHHHHhC--CCeEEEECCCCChHHHHHHHCCCEEeCCCCHHHCCCCCEEEECCCCC
Confidence 34578999999999999 79999999 999999997643 2334555677765433 24566899999887753
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.15 Score=48.38 Aligned_cols=70 Identities=9% Similarity=0.162 Sum_probs=48.8
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhc-------CCCCeEEEEecCCcchhhh----hh------CCceeeccCccccCCCCEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQE-------HPGCQIYGQTMTADHHDEL----IN------MGITPSLKWTEATQKFPYV 146 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~-------~~g~~V~~~~R~~~~~~~l----~~------~~i~~~~~d~~~~~~~D~V 146 (272)
-||.|+|+ |.+|.+++-.|... .--.+++.+++++++.... .. ..+.....|.+.++++|+|
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~kdaDiV 180 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEVFQDAEWA 180 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHHhCcCCEE
Confidence 48999998 99999999988765 1123788888887765421 11 1122223344689999999
Q ss_pred EEecCCCC
Q 024143 147 IFCAPPSR 154 (272)
Q Consensus 147 i~~a~~~~ 154 (272)
|.+|+...
T Consensus 181 VitAG~pr 188 (444)
T PLN00112 181 LLIGAKPR 188 (444)
T ss_pred EECCCCCC
Confidence 99999644
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 272 | |||
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 1e-24 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 4e-19 |
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 1e-24
Identities = 38/186 (20%), Positives = 69/186 (37%), Gaps = 18/186 (9%)
Query: 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFP-- 144
+LI G G LG +A + + G ++ G +A + + + +
Sbjct: 6 ILIAGCGDLGLELARRLTAQ--GHEVTGLRRSAQPMPAGVQ-TLIADVTRPDTLASIVHL 62
Query: 145 ---YVIFCAPPSRSLD------YPGDVR--LAALSWNGEGSFLFTSSSAIYDCSDNGACD 193
+++C S D Y +R L+AL F SS+ +Y D
Sbjct: 63 RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLD 122
Query: 194 EDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKADRGAHVYWLQKGTVDSRPDH 253
ED+P + + +L+AE ++ + +LR +G+Y R + Q +
Sbjct: 123 EDTPPIA--KDFSGKRMLEAEALLAAYSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNA 180
Query: 254 ILNLIH 259
N IH
Sbjct: 181 WTNRIH 186
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 83.8 bits (207), Expect = 4e-19
Identities = 46/199 (23%), Positives = 72/199 (36%), Gaps = 24/199 (12%)
Query: 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFP-- 144
LL G G R+++ + G +I G + D + + G P L W
Sbjct: 8 LLSFGHGYTARVLSRALAPQ--GWRIIGTSRNPDQMEAIRASGAEP-LLWPGEEPSLDGV 64
Query: 145 -YVIFCAPPSRSLDYPGDVRLAALSW------NGEGSFLFTSSSAIYDCSDNGACDEDSP 197
+++ P GD LAAL + S++A+Y D DE +P
Sbjct: 65 THLLISTAPDSG----GDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTP 120
Query: 198 VVPIGRSPRTDVLLKAEKVILEFGGC---VLRLAGLYKADRGAHVYWLQKGTVD-SRPDH 253
+ P + R + AE+ V RLAG+Y RG + G +P
Sbjct: 121 LTP--TAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQ 178
Query: 254 ILNLIHYE--VNTLVLFIA 270
+ + IH E L +A
Sbjct: 179 VFSRIHVEDIAQVLAASMA 197
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 272 | |||
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.97 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.96 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.96 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.96 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.95 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.95 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.95 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.94 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.94 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.94 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.94 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.94 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.94 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.94 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.93 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.93 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.93 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.93 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.93 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.93 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.93 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.93 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.93 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.93 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.92 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.92 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.92 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.92 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.92 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.92 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.92 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.92 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.92 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.92 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.92 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.92 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.92 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.91 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.91 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.91 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.91 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.91 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.91 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.91 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.91 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.91 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.91 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.91 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.9 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.9 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.9 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.9 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.9 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.9 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.9 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.89 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.89 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.89 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.89 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.89 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.89 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.89 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.88 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.88 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.87 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.87 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.87 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.87 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.87 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.85 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.85 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.85 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.85 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.85 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.84 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.84 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.84 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.84 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.83 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.83 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.83 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.82 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.82 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.81 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.79 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.77 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.77 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.76 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.7 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.65 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.6 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.57 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.57 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.56 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.56 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.55 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.54 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.54 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.53 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.53 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.53 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.52 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.52 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.52 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.51 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.5 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.5 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.5 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.49 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.49 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.49 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.49 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.49 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.48 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.48 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.48 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.48 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.47 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.47 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.47 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.46 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.46 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.46 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.45 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.45 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.45 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.44 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.44 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.44 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.44 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.44 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.44 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.44 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.43 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.43 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.43 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.43 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.43 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.43 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.42 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.42 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.42 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.42 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.41 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.41 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.41 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.41 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.41 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.4 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.4 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.4 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.39 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.39 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.39 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.39 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.39 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.39 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.39 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.39 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.38 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.38 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.38 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.38 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.38 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.38 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.37 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.37 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.37 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.37 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.37 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.37 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.37 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.36 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.36 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.36 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.36 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.36 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.36 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.36 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.35 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.35 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.35 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.35 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.35 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.35 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.34 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.34 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.34 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.34 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.34 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.34 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.34 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.34 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.34 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.33 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.33 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.33 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.32 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.32 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.32 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.32 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.32 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.31 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.31 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.31 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.31 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.31 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.31 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.31 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.3 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.3 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.3 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.3 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.29 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.29 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.29 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.28 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.28 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.28 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.28 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.27 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.27 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.27 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.26 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.26 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.26 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.26 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.25 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.25 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.25 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.25 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.25 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.24 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.24 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.24 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.24 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.23 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.23 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.23 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.23 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.22 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.21 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.21 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.2 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.19 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.19 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.19 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.19 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.18 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.18 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.18 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.18 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.18 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.17 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.17 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.17 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.16 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.16 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.16 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.14 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.14 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.14 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.13 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.13 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.13 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.12 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.11 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.11 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.11 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.1 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.09 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.09 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.09 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.08 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.07 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.07 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.06 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.04 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.04 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.03 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.02 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.99 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.96 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.95 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 98.9 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 98.87 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.84 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.8 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.78 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.74 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.73 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.67 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.6 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.55 | |
| 2cq8_A | 110 | 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH | 98.55 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.54 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.54 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.53 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.52 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.51 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.48 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.43 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.42 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.41 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.38 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.36 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.25 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.22 | |
| 4i4d_A | 93 | Peptide synthetase NRPS type II-PCP; structural ge | 98.18 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.17 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.13 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 98.08 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 98.06 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 98.06 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.06 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 98.03 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 98.02 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 98.01 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.01 | |
| 1dny_A | 91 | Non-ribosomal peptide synthetase peptidyl carrier | 98.0 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.0 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 98.0 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.99 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 97.99 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.98 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 97.98 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 97.96 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.94 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.93 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.93 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 97.92 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.92 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.91 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.91 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 97.91 | |
| 4dg8_A | 620 | PA1221; ANL superfamily, adenylation domain, pepti | 97.9 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 97.89 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.89 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.89 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 97.88 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 97.88 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.86 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.84 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 97.83 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 97.82 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.82 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 97.8 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 97.79 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 97.77 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 97.77 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.77 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.77 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 97.76 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 97.75 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.75 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.74 | |
| 1yqg_A | 263 | Pyrroline-5-carboxylate reductase; structural geno | 97.74 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 97.73 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 97.71 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 97.7 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 97.7 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.69 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.68 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 97.67 | |
| 3b1f_A | 290 | Putative prephenate dehydrogenase; enzyme, 4-hydro | 97.67 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 97.67 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 97.67 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 97.65 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.63 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.6 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 97.6 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 97.6 | |
| 3ego_A | 307 | Probable 2-dehydropantoate 2-reductase; structural | 97.58 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 97.57 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.57 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 97.57 | |
| 2o3j_A | 481 | UDP-glucose 6-dehydrogenase; structural genomics, | 97.55 | |
| 3i83_A | 320 | 2-dehydropantoate 2-reductase; structural genomics | 97.55 | |
| 1z82_A | 335 | Glycerol-3-phosphate dehydrogenase; TM0378, struct | 97.54 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.53 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.53 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.53 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.52 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.52 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.5 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.5 | |
| 3hwr_A | 318 | 2-dehydropantoate 2-reductase; YP_299159.1, PANE/A | 97.5 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 97.5 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 97.5 | |
| 1ks9_A | 291 | KPA reductase;, 2-dehydropantoate 2-reductase; PAN | 97.48 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 97.48 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 97.47 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 97.47 | |
| 3ghy_A | 335 | Ketopantoate reductase protein; oxidoreductase, NA | 97.47 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 97.47 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.47 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 97.44 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 97.44 | |
| 3ojo_A | 431 | CAP5O; rossmann fold, complex with cofactor NAD an | 97.44 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 97.41 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 97.4 | |
| 1i36_A | 264 | Conserved hypothetical protein MTH1747; NADP bindi | 97.4 | |
| 1yj8_A | 375 | Glycerol-3-phosphate dehydrogenase; SGPP, structur | 97.37 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.37 | |
| 1zcj_A | 463 | Peroxisomal bifunctional enzyme; peroxisomal multi | 97.36 | |
| 3hn2_A | 312 | 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str | 97.35 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 97.35 | |
| 1evy_A | 366 | Glycerol-3-phosphate dehydrogenase; rossmann fold, | 97.34 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 97.33 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.32 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.31 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 97.31 | |
| 2rcy_A | 262 | Pyrroline carboxylate reductase; malaria, structur | 97.31 | |
| 1np3_A | 338 | Ketol-acid reductoisomerase; A DEEP figure-OF-eigh | 97.3 | |
| 2yjz_A | 201 | Metalloreductase steap4; oxidoreductase, metabolic | 96.4 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 97.29 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 97.28 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.27 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 97.26 | |
| 1zej_A | 293 | HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural | 97.26 | |
| 1dlj_A | 402 | UDP-glucose dehydrogenase; rossmann fold, ternary | 97.26 | |
| 3rg2_A | 617 | Enterobactin synthase component E (ENTE), 2,3-DIH | 97.25 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.24 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 97.24 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.24 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.23 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.23 | |
| 2zyd_A | 480 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.23 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.23 | |
| 2jgp_A | 520 | Tyrocidine synthetase 3; multifunctional enzyme, a | 97.21 | |
| 2pgd_A | 482 | 6-phosphogluconate dehydrogenase; oxidoreductase ( | 97.21 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.2 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 97.18 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 97.17 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 97.17 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 97.16 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.15 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.15 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.13 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.12 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 97.12 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.11 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.11 | |
| 2p4q_A | 497 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.11 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 97.09 | |
| 2iz1_A | 474 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.08 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.08 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 97.08 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 97.07 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 97.07 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.07 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.07 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.07 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.06 | |
| 3g17_A | 294 | Similar to 2-dehydropantoate 2-reductase; structur | 97.06 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.06 | |
| 3k6j_A | 460 | Protein F01G10.3, confirmed by transcript evidenc; | 97.06 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 97.05 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.05 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.05 | |
| 2qyt_A | 317 | 2-dehydropantoate 2-reductase; APC81190, porphyrom | 97.04 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 97.03 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.03 | |
| 1x0v_A | 354 | GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase | 97.03 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.02 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 97.01 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.96 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 96.95 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 96.95 | |
| 3ba1_A | 333 | HPPR, hydroxyphenylpyruvate reductase; two domain | 96.94 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.92 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 96.92 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.92 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 96.91 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 96.91 | |
| 1pgj_A | 478 | 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o | 96.91 | |
| 2ju1_A | 95 | Erythronolide synthase; carrier protein domain, mo | 96.91 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 96.9 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 96.9 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 96.9 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 96.9 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 96.89 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 96.89 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.89 | |
| 3mog_A | 483 | Probable 3-hydroxybutyryl-COA dehydrogenase; struc | 96.88 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 96.87 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 96.87 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 96.87 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 96.87 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.86 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 96.84 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 96.84 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 96.84 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.82 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.81 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 96.8 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.79 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 96.79 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 96.79 |
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-33 Score=263.82 Aligned_cols=269 Identities=14% Similarity=0.124 Sum_probs=134.8
Q ss_pred CcceeeecccCccccc-ccccccCCcchhhhcc-cccccc-ccccccceeccccccccccccccccccccCCChh--hhc
Q 024143 1 MGTISCTNTVSLNGAC-TRFFAADSLSSKASSV-FFNNRT-WKLKLRPLVASSSSSSMATNFQVTASSSIGAVKE--EQK 75 (272)
Q Consensus 1 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 75 (272)
|+.||+.++..-.-.. ++||++|||||+|-|| -.+|+. ++++++.+|..+|...++..+............+ ...
T Consensus 50 l~~~w~~~l~~~~i~~~~~ff~lGg~Sl~a~~l~~~~~~~~~~~~~~~~~~~~t~~~la~~~~~~~~~~~~~~~~~~~~~ 129 (508)
T 4f6l_B 50 FVDVFGEVLKQNDVGVDDDFFELGGNSLEAMLVVSHLKRFGHHISMQTLYQYKTVRQIVNYMYQNQQSLVALPDNLSELQ 129 (508)
T ss_dssp ---------------------------------------------------------------------CCCCSTHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCChHHcCchHHHHHHHHHHHHHcCCCccHHHHhcCCcHHHHHHHHHhhccccccchhhhHHHH
Confidence 5789999997532122 8999999999999999 888862 3899999999999999988765432211111110 000
Q ss_pred ------------cCCCCCcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhh------------------
Q 024143 76 ------------GASSGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE------------------ 124 (272)
Q Consensus 76 ------------~~~~~~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~------------------ 124 (272)
...+....|++|||||+ ||||++|+++|.++ |++|++++|++.....
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~VLVTGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~ 207 (508)
T 4f6l_B 130 KIVMSRYNLGILEDSLSHRPLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVE 207 (508)
T ss_dssp HHHHHHHTTCCCSTTSCBCCCEEEEESCTTSHHHHHHHHHTBTT--EEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHhhhcccccccccccccCCCCeEEEECCccchHHHHHHHHHhc--CCEEEEEECCCChHHHHHHHHHHHHHhcccccch
Confidence 01222335679999997 99999999999888 9999999998773211
Q ss_pred hhhCCceeeccCc---c---ccCCCCEEEEecCCCCC----CC----hHHHHHHHH-HHhcCCCeEEEEeccee--ecC-
Q 024143 125 LINMGITPSLKWT---E---ATQKFPYVIFCAPPSRS----LD----YPGDVRLAA-LSWNGEGSFLFTSSSAI--YDC- 186 (272)
Q Consensus 125 l~~~~i~~~~~d~---~---~~~~~D~Vi~~a~~~~~----~~----~~~~~~~l~-~~~~gvkr~V~~SS~~v--Yg~- 186 (272)
....+++.+.+|. + ...++|+|||||+.... .. .+..+.+++ .+..++++|||+||.++ |..
T Consensus 208 ~~~~~v~~v~~Dl~d~~~l~~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~vG~~~~~ 287 (508)
T 4f6l_B 208 MMLSNIEVIVGDFECMDDVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDI 287 (508)
T ss_dssp HHSTTEEEEEEBTTBCSSCCCSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCTTSEECT
T ss_pred hccCceEEEecCCcccccCCCccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhhccCCcc
Confidence 1123566666654 1 35689999999997532 11 233445554 23337899999999999 322
Q ss_pred -CCCCCCCCCCCCCC-CCCChHHHHHHHHHHHHHHc---C--eeEEeeCceecCCCcH----------HHHH---HHcCc
Q 024143 187 -SDNGACDEDSPVVP-IGRSPRTDVLLKAEKVILEF---G--GCVLRLAGLYKADRGA----------HVYW---LQKGT 246 (272)
Q Consensus 187 -~~~~~~~E~~p~~p-~~~~~y~~sk~~aE~~l~~~---~--~~IlRp~~iyG~~~~~----------~~~~---l~~g~ 246 (272)
....+++|+++..+ ...+.|+++|+.+|++++++ + ++|+||+++||+.... +... +..+.
T Consensus 288 ~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~ 367 (508)
T 4f6l_B 288 DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLD 367 (508)
T ss_dssp TCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCS
T ss_pred CCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcC
Confidence 23457889887332 12389999999999999874 4 8999999999996431 1111 22333
Q ss_pred c--cCCCCcccccccHHHHHHHHHHHh
Q 024143 247 V--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 247 ~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
. .+.++..++|+|++|+|++++.++
T Consensus 368 ~~~~~~g~~~~~~v~v~DvA~ai~~~~ 394 (508)
T 4f6l_B 368 CIGVSMAEMPVDFSFVDTTARQIVALA 394 (508)
T ss_dssp EEETTGGGSEEECEEHHHHHHHHHHHT
T ss_pred CCCCCccCceEEEEcHHHHHHHHHHHH
Confidence 2 234688999999999999999876
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=227.18 Aligned_cols=184 Identities=23% Similarity=0.299 Sum_probs=148.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccc--cCCCCEEEEecCCCCCCC-hH
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEA--TQKFPYVIFCAPPSRSLD-YP 159 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~--~~~~D~Vi~~a~~~~~~~-~~ 159 (272)
+||+|||||+||||++|+++|+++ |++|++++|++.+...+...+++.+.+|... +.++|+|||+|+.....+ ..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~~~~~~ 81 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQ--GWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTAPDSGGDPVL 81 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGG--TCEEEEEESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCCCBTTBCHHH
T ss_pred CcCcEEEECCcHHHHHHHHHHHHC--CCEEEEEEcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCCccccccHHH
Confidence 468999999999999999999999 9999999999888777766788887776421 789999999999765432 22
Q ss_pred HHHHHHHHHh-cCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-C--eeEEeeCceecCCC
Q 024143 160 GDVRLAALSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-G--GCVLRLAGLYKADR 235 (272)
Q Consensus 160 ~~~~~l~~~~-~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-~--~~IlRp~~iyG~~~ 235 (272)
..+...+... .++++|||+||.++||.....+++|+++..|. +.|+.+|+++|++++++ + ++++||+++||++.
T Consensus 82 ~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~ 159 (286)
T 3ius_A 82 AALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT--AARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPGR 159 (286)
T ss_dssp HHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC--SHHHHHHHHHHHHHHHSTTCCEEEEEECEEEBTTB
T ss_pred HHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC--CHHHHHHHHHHHHHHhhcCCCEEEEeccceECCCc
Confidence 3333332222 57999999999999998766789999998887 89999999999999998 6 89999999999986
Q ss_pred cHHHHHHHcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 236 GAHVYWLQKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 236 ~~~~~~l~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..+. .+.+|.. +..+++.++|||++|+|++++.++
T Consensus 160 ~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 196 (286)
T 3ius_A 160 GPFS-KLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASM 196 (286)
T ss_dssp SSST-TSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHH
T ss_pred hHHH-HHhcCCccccCCCCcccceEEHHHHHHHHHHHH
Confidence 5432 3445543 344568899999999999999876
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-28 Score=214.82 Aligned_cols=181 Identities=14% Similarity=0.064 Sum_probs=140.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc------cccCCCCEEEEecCCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT------EATQKFPYVIFCAPPSRSL 156 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~------~~~~~~D~Vi~~a~~~~~~ 156 (272)
||+|||||+ ||||++|+++|+++ |++|++++|++.... +. +++.+.+|. ++++++|+|||+|+.....
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~~~~~ 76 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND--GNTPIILTRSIGNKA-IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAATRGSQ 76 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCC--------CCEEEECCCCHHHHHHHTTTCSEEEECCCCCCSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCCccc-CC--ceEEEEccccHHHHHHhhcCCCEEEEccccCCCC
Confidence 579999996 99999999999999 999999999855443 32 566666653 2577999999999975432
Q ss_pred C-------hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc----C--
Q 024143 157 D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G-- 221 (272)
Q Consensus 157 ~-------~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~----~-- 221 (272)
+ ......+++ ....+++||||+||.++|+.....+++|+++..|. +.|+.+|+++|++++++ +
T Consensus 77 ~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~~~~g~~ 154 (311)
T 3m2p_A 77 GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPD--LMYGVSKLACEHIGNIYSRKKGLC 154 (311)
T ss_dssp SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCS--SHHHHHHHHHHHHHHHHHHHSCCE
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCC
Confidence 1 123344544 24568999999999999997666789999998887 89999999999999874 4
Q ss_pred eeEEeeCceecCCCcH------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 222 GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 ~~IlRp~~iyG~~~~~------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++|+||+++||++... +...+.+|++ .++++..+++||++|+|++++.++
T Consensus 155 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~ 213 (311)
T 3m2p_A 155 IKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYAL 213 (311)
T ss_dssp EEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHT
T ss_pred EEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHH
Confidence 8999999999998641 2223455654 367889999999999999999876
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=215.76 Aligned_cols=178 Identities=20% Similarity=0.254 Sum_probs=142.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c----ccCC-CCEEEEecCCCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----ATQK-FPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~----~~~~-~D~Vi~~a~~~~~ 155 (272)
||+|||||+||||++|+++|+++ |++|++++|++++.. .+++.+.+|. + ++++ +|+|||+|+....
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~ 76 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ--GHEVTGLRRSAQPMP----AGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEY 76 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEEECTTSCCC----TTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCccccc----cCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCC
Confidence 57999999999999999999999 999999999876642 3555555543 2 3445 9999999975321
Q ss_pred --C----ChHHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-CeeEEe
Q 024143 156 --L----DYPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-GGCVLR 226 (272)
Q Consensus 156 --~----~~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-~~~IlR 226 (272)
. .......+++. ...++++|||+||.++||...+.+++|+++..|. +.|+.+|+++|++ +++ .++++|
T Consensus 77 ~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~-~~~~~~~ilR 153 (286)
T 3gpi_A 77 SDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAK--DFSGKRMLEAEAL-LAAYSSTILR 153 (286)
T ss_dssp C-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCC--SHHHHHHHHHHHH-GGGSSEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCC--ChhhHHHHHHHHH-HhcCCeEEEe
Confidence 1 13445566653 3457899999999999998767789999998887 8999999999999 663 489999
Q ss_pred eCceecCCCcHHHHHHHcCcc-cCCCCcccccccHHHHHHHHHHHh
Q 024143 227 LAGLYKADRGAHVYWLQKGTV-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 227 p~~iyG~~~~~~~~~l~~g~~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+++||++...+...+.+ +. .+.++..++|||++|+|++++.++
T Consensus 154 ~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~ 198 (286)
T 3gpi_A 154 FSGIYGPGRLRMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYLI 198 (286)
T ss_dssp ECEEEBTTBCHHHHHTTC-GGGSCSSBCEECEEEHHHHHHHHHHHH
T ss_pred cccccCCCchhHHHHHHh-cccCCCcCceeEEEEHHHHHHHHHHHH
Confidence 999999998766556655 43 466788999999999999998875
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.5e-28 Score=216.67 Aligned_cols=185 Identities=15% Similarity=0.084 Sum_probs=142.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh----hhhh-------CCceeeccCc-------cccCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD----ELIN-------MGITPSLKWT-------EATQKF 143 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~----~l~~-------~~i~~~~~d~-------~~~~~~ 143 (272)
.+++|||||+ ||||++|+++|+++ |++|++++|.+.... .+.. .+++.+.+|. ++++++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 4689999996 99999999999999 999999999765322 2211 4567766664 257799
Q ss_pred CEEEEecCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHH
Q 024143 144 PYVIFCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (272)
Q Consensus 144 D~Vi~~a~~~~~~----~-------~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk 210 (272)
|+|||||+..... + ......+++ ....++++|||+||.++|+.....+++|+++..|. +.|+.+|
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK 179 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPL--SPYAVTK 179 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC--SHHHHHH
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCC--ChhHHHH
Confidence 9999999974321 1 122233444 23567999999999999998767799999998887 8999999
Q ss_pred HHHHHHHHHc----C--eeEEeeCceecCCCcH----------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 211 LKAEKVILEF----G--GCVLRLAGLYKADRGA----------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 211 ~~aE~~l~~~----~--~~IlRp~~iyG~~~~~----------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|++++.+ + ++|+||+++|||+... +...+.++.+ .+++++.++|||++|+|++++.++
T Consensus 180 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~ 259 (351)
T 3ruf_A 180 YVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 259 (351)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHH
Confidence 9999998864 4 8999999999997531 2223445553 367889999999999999998875
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=206.16 Aligned_cols=182 Identities=15% Similarity=0.139 Sum_probs=135.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c---ccCCCCEEEEecCCCCCC-
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E---ATQKFPYVIFCAPPSRSL- 156 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~---~~~~~D~Vi~~a~~~~~~- 156 (272)
|||||||+ ||||++|+++|+++ |++|++++|.+.........+++.+.+|. + ++++ |+|||+|+.....
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~~~~~~~ 77 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL--GYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIKG-DVVFHFAANPEVRL 77 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCC-SEEEECCSSCSSSG
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcCC-CEEEECCCCCCchh
Confidence 58999997 99999999999999 99999999987665444345666666553 1 3445 9999999854321
Q ss_pred ---Ch-------HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc----
Q 024143 157 ---DY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF---- 220 (272)
Q Consensus 157 ---~~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~---- 220 (272)
+. .....+++ ....++++|||+||.++|+.....+++|+++..|. +.|+.+|+.+|++++.+
T Consensus 78 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~--~~Y~~sK~~~e~~~~~~~~~~ 155 (312)
T 3ko8_A 78 STTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPI--SVYGAAKAAGEVMCATYARLF 155 (312)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHHHHHh
Confidence 11 12223333 23457899999999999998767789999988887 89999999999998774
Q ss_pred C--eeEEeeCceecCCCcH-----HHHHHHcC-cc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 221 G--GCVLRLAGLYKADRGA-----HVYWLQKG-TV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 221 ~--~~IlRp~~iyG~~~~~-----~~~~l~~g-~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+ ++++||+++|||+... +...+.++ .+ .+++++.+++||++|+|++++.++
T Consensus 156 g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~ 217 (312)
T 3ko8_A 156 GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAW 217 (312)
T ss_dssp CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHH
T ss_pred CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHH
Confidence 4 7999999999997531 22233344 22 467789999999999999998875
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-26 Score=205.06 Aligned_cols=182 Identities=15% Similarity=0.123 Sum_probs=132.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec-CCcchhhhhhCCceeeccCc------cccCCCCEEEEecCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELINMGITPSLKWT------EATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~~~l~~~~i~~~~~d~------~~~~~~D~Vi~~a~~~~~ 155 (272)
|++|||||+ ||||++|+++|+++ | +|+++++ +...... ...+++.+.+|. ++++++|+|||+|+....
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g-~~v~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~~~~~ 76 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSES--N-EIVVIDNLSSGNEEF-VNEAARLVKADLAADDIKDYLKGAEEVWHIAANPDV 76 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTT--S-CEEEECCCSSCCGGG-SCTTEEEECCCTTTSCCHHHHTTCSEEEECCCCCCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhC--C-CEEEEEcCCCCChhh-cCCCcEEEECcCChHHHHHHhcCCCEEEECCCCCCh
Confidence 679999996 99999999999999 8 5555554 4333322 234555555553 246799999999985321
Q ss_pred ----CCh-------HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc--
Q 024143 156 ----LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-- 220 (272)
Q Consensus 156 ----~~~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-- 220 (272)
.++ .....+++ ....++++|||+||.++||.....+++|++|..|. +.|+.+|+.+|++++.+
T Consensus 77 ~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~--~~Y~~sK~~~e~~~~~~~~ 154 (313)
T 3ehe_A 77 RIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPI--SLYGASKLACEALIESYCH 154 (313)
T ss_dssp C-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHHH
Confidence 121 12223333 23457899999999999998767789999988776 89999999999998764
Q ss_pred --C--eeEEeeCceecCCCcH-----HHHHHHcC-cc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 221 --G--GCVLRLAGLYKADRGA-----HVYWLQKG-TV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 221 --~--~~IlRp~~iyG~~~~~-----~~~~l~~g-~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+ ++++||+++|||+... +...+.++ .. .+++++.++|||++|+|++++.++
T Consensus 155 ~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~ 218 (313)
T 3ehe_A 155 TFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGL 218 (313)
T ss_dssp HTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHT
T ss_pred hcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHh
Confidence 4 7999999999997541 22233344 32 467889999999999999999876
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-27 Score=213.14 Aligned_cols=186 Identities=13% Similarity=0.131 Sum_probs=139.7
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCcc--------ccCCCCEEEEecC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWTE--------ATQKFPYVIFCAP 151 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~~--------~~~~~D~Vi~~a~ 151 (272)
+.||+|||||+ ||||++|+++|+++ +|++|++++|++.+...+.. .+++.+.+|.. +++++|+|||||+
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILET-TDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHH-SSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhC-CCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence 56789999996 99999999999986 37999999999877665543 46676665531 4568999999999
Q ss_pred CCCCC----Ch-------HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC-------CCCCCChHHHHHH
Q 024143 152 PSRSL----DY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV-------VPIGRSPRTDVLL 211 (272)
Q Consensus 152 ~~~~~----~~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~-------~p~~~~~y~~sk~ 211 (272)
..... +. +....+++ ....+ +||||+||.+|||.....+++|+++. .|. +.|+.+|+
T Consensus 101 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~--~~Y~~sK~ 177 (372)
T 3slg_A 101 IATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPR--WIYACSKQ 177 (372)
T ss_dssp CCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTT--HHHHHHHH
T ss_pred cccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCC--CcHHHHHH
Confidence 75421 11 11123333 13446 99999999999998766788888754 333 68999999
Q ss_pred HHHHHHHHc---C--eeEEeeCceecCCCcH--------------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHH
Q 024143 212 KAEKVILEF---G--GCVLRLAGLYKADRGA--------------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 212 ~aE~~l~~~---~--~~IlRp~~iyG~~~~~--------------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
++|++++++ + ++|+||+++|||+... +...+.+++. .+++++.++|||++|+|++++.
T Consensus 178 ~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~ 257 (372)
T 3slg_A 178 LMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMK 257 (372)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHH
Confidence 999999987 5 8999999999997431 2223455553 3667899999999999999998
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
++
T Consensus 258 ~~ 259 (372)
T 3slg_A 258 II 259 (372)
T ss_dssp HH
T ss_pred HH
Confidence 76
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.94 E-value=7e-26 Score=205.70 Aligned_cols=184 Identities=14% Similarity=0.069 Sum_probs=139.3
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHh--cCCCCeEEEEecCCc-------------chhhhhhCCceeeccCc-------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQ--EHPGCQIYGQTMTAD-------------HHDELINMGITPSLKWT-------E 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~--~~~g~~V~~~~R~~~-------------~~~~l~~~~i~~~~~d~-------~ 138 (272)
+.+|+|||||+ ||||++|+++|++ + |++|++++|.+. ....+...++..+.+|. +
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 85 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHP--KAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR 85 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCT--TSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCC--CCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence 45689999996 9999999999999 8 999999999654 22222333456666653 1
Q ss_pred c-cCCCCEEEEecCCCCC--CCh-------HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 139 A-TQKFPYVIFCAPPSRS--LDY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 139 ~-~~~~D~Vi~~a~~~~~--~~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
+ ..++|+|||||+.... .++ +..+.+++. ...+++ |||+||.++||.... +++|+++..|. ++|
T Consensus 86 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~--~~Y 161 (362)
T 3sxp_A 86 LEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPE--NVY 161 (362)
T ss_dssp HTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCS--SHH
T ss_pred hhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCC--Chh
Confidence 3 5799999999996442 221 223334432 345666 999999999997654 89999998887 899
Q ss_pred HHHHHHHHHHHHHcC----eeEEeeCceecCCCcH----------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHH
Q 024143 207 TDVLLKAEKVILEFG----GCVLRLAGLYKADRGA----------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 207 ~~sk~~aE~~l~~~~----~~IlRp~~iyG~~~~~----------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
+.+|+.+|++++.+. .+++||+++|||+... +...+.++.+ .+.+++.++|||++|+|++++.
T Consensus 162 ~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~ 241 (362)
T 3sxp_A 162 GFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVK 241 (362)
T ss_dssp HHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHH
Confidence 999999999999875 7999999999998632 1223455554 3667889999999999999998
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
++
T Consensus 242 ~~ 243 (362)
T 3sxp_A 242 AM 243 (362)
T ss_dssp HT
T ss_pred HH
Confidence 76
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.8e-26 Score=204.44 Aligned_cols=187 Identities=14% Similarity=0.036 Sum_probs=136.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~ 154 (272)
.+|+|||||+ ||||++|+++|+++ |++|++++|++.+...+...+++.+.+|. ++++++|+|||+|+...
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~ 89 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYP 89 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-----
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCc
Confidence 3469999996 99999999999999 99999999998776655544677766663 25779999999998643
Q ss_pred C--C---Ch----HHHHHHHHH--HhcCCCeEEEEecceeecCCCC-CCCCCCCCCCCCC--CChHHHHHHHHHHHHHHc
Q 024143 155 S--L---DY----PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDN-GACDEDSPVVPIG--RSPRTDVLLKAEKVILEF 220 (272)
Q Consensus 155 ~--~---~~----~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~-~~~~E~~p~~p~~--~~~y~~sk~~aE~~l~~~ 220 (272)
. . ++ .....+++. ...++++|||+||.++|+.... ...+|+++..|.. .+.|+.+|+++|++++++
T Consensus 90 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~ 169 (342)
T 2x4g_A 90 SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQ 169 (342)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHH
Confidence 1 1 11 223344442 3457899999999999986543 1339999888721 289999999999998874
Q ss_pred ---C--eeEEeeCceecCCC-c----HHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 221 ---G--GCVLRLAGLYKADR-G----AHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 221 ---~--~~IlRp~~iyG~~~-~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+ ++++||+++||++. . .+...+.+|....-++..++++|++|+|++++.++
T Consensus 170 ~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~ 230 (342)
T 2x4g_A 170 ARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMAL 230 (342)
T ss_dssp HHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHH
T ss_pred hhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHH
Confidence 4 89999999999975 2 22334555654211678899999999999998875
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.7e-27 Score=207.10 Aligned_cols=183 Identities=16% Similarity=0.109 Sum_probs=135.5
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc----chhhhhh----CCceeeccCccccCCCCEEEEecCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD----HHDELIN----MGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~----~~~~l~~----~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
.+|++|||||+ ||||++|+++|+++ |++|++++|.+. ....+.. .+++.+.+| +.++|+|||+|+.
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D---l~~~d~vi~~a~~ 79 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVAS--GEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERD---LSDVRLVYHLASH 79 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHH---HTTEEEEEECCCC
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcccccchhhhhhhccCCCeeEEeCc---cccCCEEEECCcc
Confidence 34689999997 99999999999999 999999999765 2221111 112222222 3389999999986
Q ss_pred CCC-------CCh---HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc
Q 024143 153 SRS-------LDY---PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF 220 (272)
Q Consensus 153 ~~~-------~~~---~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~ 220 (272)
... .+. .....+++ ....++++|||+||.++|+.....+++|+++..|. +.|+.+|+.+|++++++
T Consensus 80 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~ 157 (321)
T 3vps_A 80 KSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPR--SPYAASKVGLEMVAGAH 157 (321)
T ss_dssp CCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHHHHHHHHH
T ss_pred CChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCC--ChhHHHHHHHHHHHHHH
Confidence 431 112 22223443 23457999999999999998767799999998887 89999999999999874
Q ss_pred -------CeeEEeeCceecCCCcH------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 221 -------GGCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 221 -------~~~IlRp~~iyG~~~~~------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.++++||+++|||+... +...+.+++. .++++..++|||++|+|++++.++
T Consensus 158 ~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~ 224 (321)
T 3vps_A 158 QRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALA 224 (321)
T ss_dssp HHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGG
T ss_pred HHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHH
Confidence 37899999999997542 2223444443 367889999999999999999876
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=205.37 Aligned_cols=186 Identities=13% Similarity=0.099 Sum_probs=136.9
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCC--CeEEEEecCC--cchhhhhh----CCceeeccCc-------cccCC--C
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTA--DHHDELIN----MGITPSLKWT-------EATQK--F 143 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g--~~V~~~~R~~--~~~~~l~~----~~i~~~~~d~-------~~~~~--~ 143 (272)
..||+|||||+ ||||++|+++|+++ | ++|++++|.. .....+.. .+++.+.+|. +++++ +
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 99 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS--YETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDV 99 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH--CTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh--CCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCC
Confidence 34579999997 99999999999999 8 7888888864 22222221 2566666654 13444 9
Q ss_pred CEEEEecCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEecceeecCC-CCCCCCCCCCCCCCCCChHHHH
Q 024143 144 PYVIFCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCS-DNGACDEDSPVVPIGRSPRTDV 209 (272)
Q Consensus 144 D~Vi~~a~~~~~~----~-------~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~-~~~~~~E~~p~~p~~~~~y~~s 209 (272)
|+|||+|+..... + ......+++ ....++++|||+||.+||+.. ...+++|++|..|. +.|+.+
T Consensus 100 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~--~~Y~~s 177 (346)
T 4egb_A 100 QVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPN--SPYSSS 177 (346)
T ss_dssp CEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCC--SHHHHH
T ss_pred CEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCC--ChhHHH
Confidence 9999999964321 1 122234444 245689999999999999975 35689999998887 899999
Q ss_pred HHHHHHHHHHc----C--eeEEeeCceecCCCcH------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 210 LLKAEKVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 210 k~~aE~~l~~~----~--~~IlRp~~iyG~~~~~------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+++|++++++ + ++++||+++|||+... +...+.++.+ .++++..++|||++|+|++++.++
T Consensus 178 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 254 (346)
T 4egb_A 178 KASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVL 254 (346)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHH
Confidence 99999999874 4 7999999999997531 2233555653 367889999999999999998875
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-26 Score=206.98 Aligned_cols=180 Identities=19% Similarity=0.168 Sum_probs=135.9
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~ 153 (272)
..+|+|||||+ ||||++|+++|+++ |++|++++|.+.. .+++.+.+|. +++.++|+|||+|+..
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~ 88 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQ--GRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM 88 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHT--TCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence 45679999997 99999999999999 9999999998765 3455555553 2567999999999975
Q ss_pred CCCC--h-------HHHHHHHH--HHhcCCCeEEEEecceeecC--CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc
Q 024143 154 RSLD--Y-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDC--SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF 220 (272)
Q Consensus 154 ~~~~--~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~--~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~ 220 (272)
.... + +....+++ ....++++|||+||.+|||. ....+++|+++..|. +.|+.+|+.+|++++.+
T Consensus 89 ~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~--~~Y~~sK~~~E~~~~~~ 166 (347)
T 4id9_A 89 SWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPN--SPYGLTKLLGEELVRFH 166 (347)
T ss_dssp CSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCC--SHHHHHHHHHHHHHHHH
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCC--ChHHHHHHHHHHHHHHH
Confidence 4321 1 12233443 23568999999999999997 455689999998886 89999999999999854
Q ss_pred ----C--eeEEeeCcee-------------cCCCcH-----------------HHHHHHcCcc---cCCCCccccc----
Q 024143 221 ----G--GCVLRLAGLY-------------KADRGA-----------------HVYWLQKGTV---DSRPDHILNL---- 257 (272)
Q Consensus 221 ----~--~~IlRp~~iy-------------G~~~~~-----------------~~~~l~~g~~---~~~~~~~~~~---- 257 (272)
+ ++|+||+++| ||+... +...+..|.+ .++++..++|
T Consensus 167 ~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 246 (347)
T 4id9_A 167 QRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHI 246 (347)
T ss_dssp HHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECE
T ss_pred HHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCc
Confidence 3 7999999999 876321 1122344543 3567888999
Q ss_pred ccHHHHHHHHHHHh
Q 024143 258 IHYEVNTLVLFIAS 271 (272)
Q Consensus 258 I~v~Dva~ai~~a~ 271 (272)
||++|+|++++.++
T Consensus 247 i~v~Dva~ai~~~~ 260 (347)
T 4id9_A 247 TDTRDMVAGILLAL 260 (347)
T ss_dssp EEHHHHHHHHHHHH
T ss_pred EeHHHHHHHHHHHh
Confidence 99999999999876
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.6e-26 Score=201.61 Aligned_cols=177 Identities=16% Similarity=0.079 Sum_probs=129.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCCCC------C
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSL------D 157 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~~~------~ 157 (272)
|||||||+ ||||++|+++|+++ ||+|++++|++.+.. +.....+.+.++++|+|||+|+..... +
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~--G~~V~~l~R~~~~~~------~~~~~~~~~~l~~~d~vihla~~~i~~~~~~~~~ 72 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR--GHEVTLVSRKPGPGR------ITWDELAASGLPSCDAAVNLAGENILNPLRRWNE 72 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCTTE------EEHHHHHHHCCCSCSEEEECCCCCSSCTTSCCCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCcCe------eecchhhHhhccCCCEEEEeccCcccchhhhhhh
Confidence 68999997 99999999999999 999999999865421 111112234678999999999753211 1
Q ss_pred -h--------HHHHHHHHH--Hhc--CCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc--C-
Q 024143 158 -Y--------PGDVRLAAL--SWN--GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF--G- 221 (272)
Q Consensus 158 -~--------~~~~~~l~~--~~~--gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~--~- 221 (272)
+ .+.+++++. ... +.++||++||+++||+....+++|++|..|. +.|++.+...|...... +
T Consensus 73 ~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~--~~~~~~~~~~e~~~~~~~~~~ 150 (298)
T 4b4o_A 73 TFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDF--DFFSNLVTKWEAAARLPGDST 150 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCS--SHHHHHHHHHHHHHCCSSSSS
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCcccc--chhHHHHHHHHHHHHhhccCC
Confidence 1 122333331 223 4567999999999998777899999998776 67787777777654433 2
Q ss_pred -eeEEeeCceecCCCcHHHH---HHHcCc--ccCCCCcccccccHHHHHHHHHHHh
Q 024143 222 -GCVLRLAGLYKADRGAHVY---WLQKGT--VDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 -~~IlRp~~iyG~~~~~~~~---~l~~g~--~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+++||+.+|||+...+.. ....+. .++++++.++|||++|+|++++.++
T Consensus 151 ~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~ 206 (298)
T 4b4o_A 151 RQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHAL 206 (298)
T ss_dssp EEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHH
T ss_pred ceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHH
Confidence 7899999999998654322 233343 3588999999999999999998876
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-25 Score=203.13 Aligned_cols=186 Identities=18% Similarity=0.095 Sum_probs=139.7
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc----hhhhh-------hCCceeeccCc-------cccCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH----HDELI-------NMGITPSLKWT-------EATQK 142 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~----~~~l~-------~~~i~~~~~d~-------~~~~~ 142 (272)
+.|++|||||+ ||||++|+++|+++ |++|++++|.+.. ...+. ..+++.+.+|. +++++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 102 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG 102 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcC
Confidence 35689999997 99999999999999 9999999997642 22111 14566666653 24679
Q ss_pred CCEEEEecCCCCC----CCh-------HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHH
Q 024143 143 FPYVIFCAPPSRS----LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (272)
Q Consensus 143 ~D~Vi~~a~~~~~----~~~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~s 209 (272)
+|+|||+|+.... .++ .....+++ ....++++|||+||.++|+.....+++|+++..|. +.|+.+
T Consensus 103 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~--~~Y~~s 180 (352)
T 1sb8_A 103 VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPL--SPYAVT 180 (352)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC--SHHHHH
T ss_pred CCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCC--ChhHHH
Confidence 9999999997531 111 12233333 13457899999999999997666789999988776 899999
Q ss_pred HHHHHHHHHHc----C--eeEEeeCceecCCCcH----------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHH
Q 024143 210 LLKAEKVILEF----G--GCVLRLAGLYKADRGA----------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 210 k~~aE~~l~~~----~--~~IlRp~~iyG~~~~~----------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
|+.+|++++.+ + ++++||+++|||+... +...+.++.+ .+++++.++|||++|+|++++.+
T Consensus 181 K~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~ 260 (352)
T 1sb8_A 181 KYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLA 260 (352)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHH
Confidence 99999998754 4 8999999999997421 2223455554 36778899999999999998876
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 261 ~ 261 (352)
T 1sb8_A 261 A 261 (352)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=199.47 Aligned_cols=183 Identities=17% Similarity=0.116 Sum_probs=133.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh-hhhhCCceeeccCc-------cccC--CCCEEEEecCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-ELINMGITPSLKWT-------EATQ--KFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~-~l~~~~i~~~~~d~-------~~~~--~~D~Vi~~a~~ 152 (272)
||+|||||+ ||||++|+++|+++ |++|++++|...... .+. .+++.+.+|. ++++ ++|+|||+|+.
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~ 77 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE--GLSVVVVDNLQTGHEDAIT-EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAAD 77 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGSC-TTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCcCchhhcC-CCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcc
Confidence 689999996 99999999999999 999999999754432 221 2456665553 1344 89999999997
Q ss_pred CCCC----Ch-------HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Q 024143 153 SRSL----DY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE 219 (272)
Q Consensus 153 ~~~~----~~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~ 219 (272)
.... +. .....+++ ....++++|||+||.++|+.....+++|++|..|. +.|+.+|+.+|++++.
T Consensus 78 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~--~~Y~~sK~~~e~~~~~ 155 (330)
T 2c20_A 78 SLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPT--NTYGETKLAIEKMLHW 155 (330)
T ss_dssp CCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCS--SHHHHHHHHHHHHHHH
T ss_pred cCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCC--ChHHHHHHHHHHHHHH
Confidence 5321 11 12223333 23457899999999999987666789999988776 8999999999999887
Q ss_pred c----C--eeEEeeCceecCCC-----------cHHHH---HHHc--Ccc---cC------CCCcccccccHHHHHHHHH
Q 024143 220 F----G--GCVLRLAGLYKADR-----------GAHVY---WLQK--GTV---DS------RPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 220 ~----~--~~IlRp~~iyG~~~-----------~~~~~---~l~~--g~~---~~------~~~~~~~~I~v~Dva~ai~ 268 (272)
+ + ++++||+++||++. ..+.. .... +.. .+ +++..++|||++|+|++++
T Consensus 156 ~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~ 235 (330)
T 2c20_A 156 YSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHF 235 (330)
T ss_dssp HHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHH
T ss_pred HHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHH
Confidence 4 4 79999999999852 11211 1122 222 12 5678899999999999998
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
.++
T Consensus 236 ~~~ 238 (330)
T 2c20_A 236 LGL 238 (330)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-25 Score=203.00 Aligned_cols=186 Identities=16% Similarity=0.071 Sum_probs=137.3
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~ 153 (272)
..||+|||||+ ||||++|+++|+++ |++|++++|++.+.......+++.+.+|. ++++++|+|||+|+..
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~ 104 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADM 104 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHC--CCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceec
Confidence 35789999997 99999999999999 99999999987654433334566666653 2567999999999965
Q ss_pred CC-----CCh-------HHHHHHHH--HHhcCCCeEEEEecceeecCCC-----CCCCCCCC--CCCCCCCChHHHHHHH
Q 024143 154 RS-----LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSD-----NGACDEDS--PVVPIGRSPRTDVLLK 212 (272)
Q Consensus 154 ~~-----~~~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~-----~~~~~E~~--p~~p~~~~~y~~sk~~ 212 (272)
.. .+. .....+++ ....++++|||+||.++|+... ..+++|++ +..|. +.|+.+|+.
T Consensus 105 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~--~~Y~~sK~~ 182 (379)
T 2c5a_A 105 GGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ--DAFGLEKLA 182 (379)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCS--SHHHHHHHH
T ss_pred CcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCC--ChhHHHHHH
Confidence 32 221 11223333 2346789999999999998532 23577877 44554 799999999
Q ss_pred HHHHHHHc----C--eeEEeeCceecCCCcH----------HHHHHHcCcc----cCCCCcccccccHHHHHHHHHHHh
Q 024143 213 AEKVILEF----G--GCVLRLAGLYKADRGA----------HVYWLQKGTV----DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 213 aE~~l~~~----~--~~IlRp~~iyG~~~~~----------~~~~l~~g~~----~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+|++++.+ + ++++||+++|||+... +...+.++.. .+++++.++|||++|+|++++.++
T Consensus 183 ~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l 261 (379)
T 2c5a_A 183 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 261 (379)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence 99998764 4 7999999999996431 2223434432 467788999999999999998875
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-26 Score=194.29 Aligned_cols=181 Identities=13% Similarity=0.011 Sum_probs=129.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~ 155 (272)
||+|||||+ |+||++|+++|+++ |++|++++|++++...+. .+++.+.+|. ++++++|+|||+|+....
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~ 80 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWN 80 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT--TCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC---
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCC
Confidence 689999996 99999999999999 999999999977665432 4566666664 257799999999987532
Q ss_pred CC-----hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc----C--e
Q 024143 156 LD-----YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G--G 222 (272)
Q Consensus 156 ~~-----~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~----~--~ 222 (272)
.. ......+++ ....+++||||+||.++|+... ....|+.+..|. +.|+.+|+.+|++++.+ + +
T Consensus 81 ~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~-~~~~~~~~~~p~--~~Y~~sK~~~e~~~~~~~~~~~~~~ 157 (227)
T 3dhn_A 81 NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAP-GLRLMDSGEVPE--NILPGVKALGEFYLNFLMKEKEIDW 157 (227)
T ss_dssp ---CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEET-TEEGGGTTCSCG--GGHHHHHHHHHHHHHTGGGCCSSEE
T ss_pred ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCC-CCccccCCcchH--HHHHHHHHHHHHHHHHHhhccCccE
Confidence 21 233444444 2456899999999999875433 233456666666 79999999999766554 3 8
Q ss_pred eEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 223 CVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 223 ~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++||+++||++............+...++ .+++||++|+|++++.++
T Consensus 158 ~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~ai~~~l 205 (227)
T 3dhn_A 158 VFFSPAADMRPGVRTGRYRLGKDDMIVDIV-GNSHISVEDYAAAMIDEL 205 (227)
T ss_dssp EEEECCSEEESCCCCCCCEEESSBCCCCTT-SCCEEEHHHHHHHHHHHH
T ss_pred EEEeCCcccCCCccccceeecCCCcccCCC-CCcEEeHHHHHHHHHHHH
Confidence 999999999997542111111122222233 389999999999999876
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.8e-25 Score=198.65 Aligned_cols=184 Identities=16% Similarity=0.125 Sum_probs=135.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-------hCCceeeccCc-------cccC--CCCEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSLKWT-------EATQ--KFPYV 146 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-------~~~i~~~~~d~-------~~~~--~~D~V 146 (272)
+|+|||||+ ||||++++++|+++ |++|++++|.+....... ..+++.+.+|. ++++ ++|+|
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAH--GYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA 82 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred CcEEEEecCCcHHHHHHHHHHHHC--CCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence 468999996 99999999999999 999999999765543221 23556666653 1333 89999
Q ss_pred EEecCCCCCCC-----------hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024143 147 IFCAPPSRSLD-----------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKA 213 (272)
Q Consensus 147 i~~a~~~~~~~-----------~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~a 213 (272)
||+|+...... ......+++ +...++++|||+||.++||.....+++|+++..|. +.|+.+|+.+
T Consensus 83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~--~~Y~~sK~~~ 160 (341)
T 3enk_A 83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSAT--NPYGQTKLMA 160 (341)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCS--SHHHHHHHHH
T ss_pred EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCC--ChhHHHHHHH
Confidence 99999754211 112223333 23567899999999999998767789999998876 8999999999
Q ss_pred HHHHHHc-----C--eeEEeeCceecCCC------------cH---HHHHHHcC--cc---cC------CCCcccccccH
Q 024143 214 EKVILEF-----G--GCVLRLAGLYKADR------------GA---HVYWLQKG--TV---DS------RPDHILNLIHY 260 (272)
Q Consensus 214 E~~l~~~-----~--~~IlRp~~iyG~~~------------~~---~~~~l~~g--~~---~~------~~~~~~~~I~v 260 (272)
|++++.+ + ++++||+++|||+. .. +......+ .. .+ ++++.++|||+
T Consensus 161 e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v 240 (341)
T 3enk_A 161 EQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHV 240 (341)
T ss_dssp HHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEH
T ss_pred HHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEH
Confidence 9998864 2 79999999999853 11 11122222 21 23 67899999999
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|++++.++
T Consensus 241 ~Dva~a~~~~~ 251 (341)
T 3enk_A 241 VDLARGHIAAL 251 (341)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988775
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=197.79 Aligned_cols=171 Identities=17% Similarity=0.173 Sum_probs=129.3
Q ss_pred CC-eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc----cccC--CCCEEEEecCCCCC
Q 024143 84 EN-DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~-~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~----~~~~--~~D~Vi~~a~~~~~ 155 (272)
|+ +|||||+ ||||++++++|+++ |++|++++|.+... .|. ++++ ++|+|||+|+....
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~D~------------~d~~~~~~~~~~~~~d~vi~~a~~~~~ 69 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPE--EYDIYPFDKKLLDI------------TNISQVQQVVQEIRPHIIIHCAAYTKV 69 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTT--TEEEEEECTTTSCT------------TCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhC--CCEEEEecccccCC------------CCHHHHHHHHHhcCCCEEEECCcccCh
Confidence 55 9999996 99999999999999 99999999943221 111 2333 79999999997542
Q ss_pred ----CCh-------HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC-
Q 024143 156 ----LDY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (272)
Q Consensus 156 ----~~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~- 221 (272)
.+. .....+++. ...++ ||||+||.++|+.....+++|+++..|. +.|+.+|+++|++++.+.
T Consensus 70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~~ 146 (287)
T 3sc6_A 70 DQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPI--NIYGASKYAGEQFVKELHN 146 (287)
T ss_dssp HHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHCS
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHhCC
Confidence 111 122333431 33466 7999999999988767899999998887 899999999999999986
Q ss_pred -eeEEeeCceecCCCcHHHH----HHHcCcc-cCCCCcccccccHHHHHHHHHHHh
Q 024143 222 -GCVLRLAGLYKADRGAHVY----WLQKGTV-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 -~~IlRp~~iyG~~~~~~~~----~l~~g~~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++++||+++|||+...+.. .+.++.+ ...+++.+++||++|+|++++.++
T Consensus 147 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~ 202 (287)
T 3sc6_A 147 KYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLI 202 (287)
T ss_dssp SEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHH
T ss_pred CcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHH
Confidence 8999999999997543322 2334544 223568899999999999999876
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.6e-25 Score=200.57 Aligned_cols=186 Identities=12% Similarity=0.085 Sum_probs=129.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCC-CeEEEEecCCcch-hhhh-hCCceeeccCc-------cccCCCCEEEEec
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHH-DELI-NMGITPSLKWT-------EATQKFPYVIFCA 150 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~-~~l~-~~~i~~~~~d~-------~~~~~~D~Vi~~a 150 (272)
..||+|||||+ ||||++|+++|+++ | ++|++++|.+... ..+. ..+++.+.+|. ++++++|+|||+|
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A 107 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLEL--GVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLA 107 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHT--TCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHc--CCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECC
Confidence 45679999996 99999999999999 9 9999999976543 2221 23566666653 2567999999999
Q ss_pred CCCCCC----Ch-------HHHHHHHHH--Hhc-CCCeEEEEecceeecCCCCCCCC--CCC---CC-CCCCCChHHHHH
Q 024143 151 PPSRSL----DY-------PGDVRLAAL--SWN-GEGSFLFTSSSAIYDCSDNGACD--EDS---PV-VPIGRSPRTDVL 210 (272)
Q Consensus 151 ~~~~~~----~~-------~~~~~~l~~--~~~-gvkr~V~~SS~~vYg~~~~~~~~--E~~---p~-~p~~~~~y~~sk 210 (272)
+..... +. .....+++. ... ++++|||+||.++||.....+++ |++ |. .|. ++|+.+|
T Consensus 108 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~--~~Y~~sK 185 (377)
T 2q1s_A 108 TYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNND--SPYSMSK 185 (377)
T ss_dssp CCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCC--SHHHHHH
T ss_pred CccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCC--CchHHHH
Confidence 975321 11 122334442 344 78999999999999976555788 887 65 565 8999999
Q ss_pred HHHHHHHHHc----C--eeEEeeCceecCCC---------c------H----HHHHHHcCcc---cCCCCcccccccHHH
Q 024143 211 LKAEKVILEF----G--GCVLRLAGLYKADR---------G------A----HVYWLQKGTV---DSRPDHILNLIHYEV 262 (272)
Q Consensus 211 ~~aE~~l~~~----~--~~IlRp~~iyG~~~---------~------~----~~~~l~~g~~---~~~~~~~~~~I~v~D 262 (272)
+++|++++++ + ++++||+++||++. . . +...+.++.+ .++++..++|||++|
T Consensus 186 ~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~D 265 (377)
T 2q1s_A 186 IFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVED 265 (377)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHH
Confidence 9999998864 4 89999999999976 2 1 1223455654 356788999999999
Q ss_pred HHHH-HHHHh
Q 024143 263 NTLV-LFIAS 271 (272)
Q Consensus 263 va~a-i~~a~ 271 (272)
+|++ ++.++
T Consensus 266 va~a~i~~~~ 275 (377)
T 2q1s_A 266 VANGLIACAA 275 (377)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999 88765
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-25 Score=197.76 Aligned_cols=182 Identities=14% Similarity=0.125 Sum_probs=134.7
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c----ccC--CCCEEEEecC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----ATQ--KFPYVIFCAP 151 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~----~~~--~~D~Vi~~a~ 151 (272)
.++++|||||+ ||||++|+++|+++ |++|++++|++.. ..+ +++.+.+|. + +++ ++|+|||||+
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~-~~l---~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 83 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQ--NVEVFGTSRNNEA-KLP---NVEMISLDIMDSQRVKKVISDIKPDYIFHLAA 83 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCTTC-CCT---TEEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred cCcceEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcc-ccc---eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 35689999996 99999999999999 9999999998665 222 555555553 1 344 3899999999
Q ss_pred CCCC----CCh-------HHHHHHHHH--Hh-cCCCeEEEEecceeecCC--CCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024143 152 PSRS----LDY-------PGDVRLAAL--SW-NGEGSFLFTSSSAIYDCS--DNGACDEDSPVVPIGRSPRTDVLLKAEK 215 (272)
Q Consensus 152 ~~~~----~~~-------~~~~~~l~~--~~-~gvkr~V~~SS~~vYg~~--~~~~~~E~~p~~p~~~~~y~~sk~~aE~ 215 (272)
.... .++ .....+++. .. .++++|||+||.++|+.. ...+++|+++..|. +.|+.+|+++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~--~~Y~~sK~~~E~ 161 (321)
T 2pk3_A 84 KSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPM--SPYGVSKASVGM 161 (321)
T ss_dssp CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCC--SHHHHHHHHHHH
T ss_pred ccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCC--CccHHHHHHHHH
Confidence 7541 121 122233331 22 268999999999999875 45689999988776 899999999999
Q ss_pred HHHHc----C--eeEEeeCceecCCCcH------HHHHHHc---C--cc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 216 VILEF----G--GCVLRLAGLYKADRGA------HVYWLQK---G--TV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 216 ~l~~~----~--~~IlRp~~iyG~~~~~------~~~~l~~---g--~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++.+ + ++++||+++|||+... +...+.+ | .+ .++++..++++|++|+|++++.++
T Consensus 162 ~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~ 237 (321)
T 2pk3_A 162 LARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLS 237 (321)
T ss_dssp HHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHH
Confidence 98876 4 7999999999997542 2223333 5 22 466788999999999999998775
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=8.9e-25 Score=195.80 Aligned_cols=185 Identities=17% Similarity=0.053 Sum_probs=135.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch--hhhh----hCCceeeccCc---c----ccC--CCCEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH--DELI----NMGITPSLKWT---E----ATQ--KFPYV 146 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~--~~l~----~~~i~~~~~d~---~----~~~--~~D~V 146 (272)
++++|||||+ ||||++|+++|+++ |++|++++|++.+. ..+. ..+++.+.+|. + +++ ++|+|
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEV 90 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence 4589999996 99999999999999 99999999986542 1121 12455555553 1 233 47999
Q ss_pred EEecCCCCC----CCh-------HHHHHHHHH--HhcCC-CeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 024143 147 IFCAPPSRS----LDY-------PGDVRLAAL--SWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLK 212 (272)
Q Consensus 147 i~~a~~~~~----~~~-------~~~~~~l~~--~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~ 212 (272)
||+|+.... .+. .....+++. ...++ ++|||+||.++|+.....+++|+++..|. +.|+.+|++
T Consensus 91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~--~~Y~~sK~~ 168 (335)
T 1rpn_A 91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR--SPYGVAKLY 168 (335)
T ss_dssp EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHH
T ss_pred EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCC--ChhHHHHHH
Confidence 999996532 121 122333331 23465 89999999999997666689999998886 899999999
Q ss_pred HHHHHHHc----C--eeEEeeCceecCCCcH------H---HHHHHcCc-c---cCCCCcccccccHHHHHHHHHHHh
Q 024143 213 AEKVILEF----G--GCVLRLAGLYKADRGA------H---VYWLQKGT-V---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 213 aE~~l~~~----~--~~IlRp~~iyG~~~~~------~---~~~l~~g~-~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+|++++.+ + ++++||+++|||+... + ...+.+|. + .+++++.++|||++|+|++++.++
T Consensus 169 ~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~ 246 (335)
T 1rpn_A 169 GHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLML 246 (335)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHH
Confidence 99998764 4 7999999999997431 1 11234554 2 367789999999999999998875
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-25 Score=199.21 Aligned_cols=185 Identities=14% Similarity=0.098 Sum_probs=134.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-----hCCceeeccCc---c----ccC--CCCEEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----NMGITPSLKWT---E----ATQ--KFPYVI 147 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-----~~~i~~~~~d~---~----~~~--~~D~Vi 147 (272)
.+|+|||||+ ||||++|+++|+++ |++|++++|++.+...+. ..+++.+.+|. + +++ ++|+||
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 85 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVF 85 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHhC--CCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEE
Confidence 3478999996 99999999999999 999999999876543322 12456665653 1 334 489999
Q ss_pred EecCCCCC----CCh-------HHHHHHHHH--HhcC-CCeEEEEecceeecCCCC-CCCCCCCCCCCCCCChHHHHHHH
Q 024143 148 FCAPPSRS----LDY-------PGDVRLAAL--SWNG-EGSFLFTSSSAIYDCSDN-GACDEDSPVVPIGRSPRTDVLLK 212 (272)
Q Consensus 148 ~~a~~~~~----~~~-------~~~~~~l~~--~~~g-vkr~V~~SS~~vYg~~~~-~~~~E~~p~~p~~~~~y~~sk~~ 212 (272)
|+|+.... .++ .....+++. ...+ +++|||+||.++||.... .+++|+++..|. +.|+.+|+.
T Consensus 86 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~--~~Y~~sK~~ 163 (357)
T 1rkx_A 86 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY--DPYSNSKGC 163 (357)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS--SHHHHHHHH
T ss_pred ECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCC--CccHHHHHH
Confidence 99985321 111 112233331 2234 899999999999987542 478898887776 899999999
Q ss_pred HHHHHHHc-------------C--eeEEeeCceecCCCc----H---HHHHHHcCcc--cCCCCcccccccHHHHHHHHH
Q 024143 213 AEKVILEF-------------G--GCVLRLAGLYKADRG----A---HVYWLQKGTV--DSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 213 aE~~l~~~-------------~--~~IlRp~~iyG~~~~----~---~~~~l~~g~~--~~~~~~~~~~I~v~Dva~ai~ 268 (272)
+|++++.+ + ++++||+++|||+.. . +...+.+|.+ +..++..++|||++|+|++++
T Consensus 164 ~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~ 243 (357)
T 1rkx_A 164 AELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYL 243 (357)
T ss_dssp HHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHH
Confidence 99988764 5 789999999999752 1 2223455654 355778899999999999988
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
.++
T Consensus 244 ~~~ 246 (357)
T 1rkx_A 244 LLA 246 (357)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8e-25 Score=197.07 Aligned_cols=185 Identities=11% Similarity=0.108 Sum_probs=135.0
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc--chh---hhhhCCceeeccCc-------cccCCCCEEEEec
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD--HHD---ELINMGITPSLKWT-------EATQKFPYVIFCA 150 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~--~~~---~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a 150 (272)
||+|||||+ ||||++|+++|+++++|++|++++|.+. ... .+...+++.+.+|. ++++++|+|||+|
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 83 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 83 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence 689999996 9999999999999855789999999652 112 22123556665553 2567899999999
Q ss_pred CCCCCC----C-------hHHHHHHHHH--HhcCCCeEEEEecceeecCCCC------------CCCCCCCCCCCCCCCh
Q 024143 151 PPSRSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDN------------GACDEDSPVVPIGRSP 205 (272)
Q Consensus 151 ~~~~~~----~-------~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~------------~~~~E~~p~~p~~~~~ 205 (272)
+..... + ......+++. ...++ +|||+||.++||.... .+++|++|..|. +.
T Consensus 84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~--~~ 160 (348)
T 1oc2_A 84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS--SP 160 (348)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC--SH
T ss_pred cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCC--Cc
Confidence 975311 1 1122333331 23466 9999999999986422 678999887776 89
Q ss_pred HHHHHHHHHHHHHHc----C--eeEEeeCceecCCCc---H---HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHH
Q 024143 206 RTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG---A---HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 206 y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~---~---~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
|+.+|+.+|++++.+ + ++++||+++|||+.. . +...+.++.. .+.+++.++++|++|+|++++.+
T Consensus 161 Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 240 (348)
T 1oc2_A 161 YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 240 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHH
Confidence 999999999998764 4 799999999999753 1 1223444543 36678899999999999999877
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 241 ~ 241 (348)
T 1oc2_A 241 L 241 (348)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=192.58 Aligned_cols=185 Identities=16% Similarity=0.156 Sum_probs=135.9
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhc-CCC---CeEEEEecCCc--chhhhhh----CCceeeccCc-------cccCCCCEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQE-HPG---CQIYGQTMTAD--HHDELIN----MGITPSLKWT-------EATQKFPYV 146 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~-~~g---~~V~~~~R~~~--~~~~l~~----~~i~~~~~d~-------~~~~~~D~V 146 (272)
|+|||||+ ||||++|+++|+++ ++| ++|++++|.+. ....+.. .+++.+.+|. +++.++|+|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 80 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence 48999996 99999999999984 446 99999999642 2222211 2455555553 246799999
Q ss_pred EEecCCCCCC----C-------hHHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024143 147 IFCAPPSRSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKA 213 (272)
Q Consensus 147 i~~a~~~~~~----~-------~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~a 213 (272)
||+|+..... + ......+++. ...++++|||+||.++||.....+++|+++..|. +.|+.+|+.+
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~--~~Y~~sK~~~ 158 (337)
T 1r6d_A 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPN--SPYAASKAGS 158 (337)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCC--SHHHHHHHHH
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCC--CchHHHHHHH
Confidence 9999975311 1 1223334432 3457899999999999987655688999887776 8999999999
Q ss_pred HHHHHHc----C--eeEEeeCceecCCCcH------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 214 EKVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 214 E~~l~~~----~--~~IlRp~~iyG~~~~~------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|++++.+ + ++++||+++|||+... +...+.++.. .+++++.++++|++|+|++++.++
T Consensus 159 e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 231 (337)
T 1r6d_A 159 DLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVL 231 (337)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHH
Confidence 9998764 3 8999999999997531 2223445543 367788999999999999998775
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-24 Score=193.86 Aligned_cols=185 Identities=14% Similarity=0.092 Sum_probs=132.6
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch----hhhh-hCCceeeccCc--cccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH----DELI-NMGITPSLKWT--EATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~----~~l~-~~~i~~~~~d~--~~~~~~D~Vi~~a~~~ 153 (272)
..|++|||||+ ||||++|+++|+++ |++|++++|.+... ..+. ..+++.+..|. ..+.++|+|||+|+..
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih~A~~~ 102 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPA 102 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCC
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHC--CCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEECcccc
Confidence 45689999997 99999999999999 99999999975422 1111 12455555553 3567899999999975
Q ss_pred CC----CCh-------HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCC-----CCCCCCCChHHHHHHHHHH
Q 024143 154 RS----LDY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDS-----PVVPIGRSPRTDVLLKAEK 215 (272)
Q Consensus 154 ~~----~~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~-----p~~p~~~~~y~~sk~~aE~ 215 (272)
.. .+. .....+++. ...++ +|||+||.++|+.....+++|+. |..|. +.|+.+|+.+|+
T Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~--~~Y~~sK~~~E~ 179 (343)
T 2b69_A 103 SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPR--ACYDEGKRVAET 179 (343)
T ss_dssp SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTT--HHHHHHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCC--CchHHHHHHHHH
Confidence 32 111 122233331 23455 99999999999876566788873 44444 689999999999
Q ss_pred HHHHc----C--eeEEeeCceecCCCc-----H---HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 216 VILEF----G--GCVLRLAGLYKADRG-----A---HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 216 ~l~~~----~--~~IlRp~~iyG~~~~-----~---~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++.+ + ++++||+++|||+.. . +...+.++.. .+++++.++|||++|+|++++.++
T Consensus 180 ~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~ 252 (343)
T 2b69_A 180 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM 252 (343)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHH
Confidence 98754 3 799999999999642 1 2223444543 467788999999999999998875
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-24 Score=190.41 Aligned_cols=181 Identities=13% Similarity=0.103 Sum_probs=126.3
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCC-CeEEEEecCCcch--hhhhhCCceeeccCc----cccC-----CCCEEEEecCC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHH--DELINMGITPSLKWT----EATQ-----KFPYVIFCAPP 152 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~--~~l~~~~i~~~~~d~----~~~~-----~~D~Vi~~a~~ 152 (272)
+|||||+ ||||++|+++|+++ | ++|++++|.+... ..+....+.....|. .+++ ++|+|||+|+.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~ 78 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC 78 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT--TCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred CEEEEcCccHHHHHHHHHHHHC--CCcEEEEEccCCCCchhhhcCcceeccccccHHHHHHHHhccccCCCcEEEECccc
Confidence 5899997 99999999999999 9 9999999986542 222222111222221 1344 49999999987
Q ss_pred CCC--CCh-------HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-
Q 024143 153 SRS--LDY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF- 220 (272)
Q Consensus 153 ~~~--~~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~- 220 (272)
... .+. .....+++. ...++ +|||+||.++|+.....+++|+++..|. ++|+.+|+++|++++++
T Consensus 79 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~--~~Y~~sK~~~e~~~~~~~ 155 (310)
T 1eq2_A 79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL--NVYGYSKFLFDEYVRQIL 155 (310)
T ss_dssp CCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS--SHHHHHHHHHHHHHHHHG
T ss_pred ccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCC--ChhHHHHHHHHHHHHHHH
Confidence 542 121 222334432 34578 9999999999997655689999988776 89999999999999875
Q ss_pred ---C--eeEEeeCceecCCCc-------H---HHHHHHcCcc---cCCCCc-ccccccHHHHHHHHHHHh
Q 024143 221 ---G--GCVLRLAGLYKADRG-------A---HVYWLQKGTV---DSRPDH-ILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 221 ---~--~~IlRp~~iyG~~~~-------~---~~~~l~~g~~---~~~~~~-~~~~I~v~Dva~ai~~a~ 271 (272)
+ ++++||+++|||+.. . +...+.++.+ .++++. .+++||++|+|++++.++
T Consensus 156 ~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~ 225 (310)
T 1eq2_A 156 PEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL 225 (310)
T ss_dssp GGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHH
T ss_pred HHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHH
Confidence 3 899999999999753 1 2223455553 356778 899999999999998875
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.2e-25 Score=194.57 Aligned_cols=175 Identities=10% Similarity=-0.015 Sum_probs=125.3
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC---c----cccC--CCCEEEEecC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW---T----EATQ--KFPYVIFCAP 151 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d---~----~~~~--~~D~Vi~~a~ 151 (272)
+.||+|||||+ ||||++|+++|+++ |+ +..... .+++.+.+| . ++++ ++|+|||||+
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~------~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~ 70 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADG--AG------LPGEDW-----VFVSSKDADLTDTAQTRALFEKVQPTHVIHLAA 70 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTT--TC------CTTCEE-----EECCTTTCCTTSHHHHHHHHHHSCCSEEEECCC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhc--CC------cccccc-----cccCceecccCCHHHHHHHHhhcCCCEEEECce
Confidence 46789999996 99999999999999 87 211111 112222223 2 1343 4999999999
Q ss_pred CCCC-----CC-------hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCC----CCCCCCCC-hHHHHHHH
Q 024143 152 PSRS-----LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS----PVVPIGRS-PRTDVLLK 212 (272)
Q Consensus 152 ~~~~-----~~-------~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~----p~~p~~~~-~y~~sk~~ 212 (272)
.... .+ ......+++ ....+++||||+||.++||.....+++|++ +..|. + +|+.+|+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~--~~~Y~~sK~~ 148 (319)
T 4b8w_A 71 MVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNS--NFGYSYAKRM 148 (319)
T ss_dssp CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSS--SHHHHHHHHH
T ss_pred ecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCC--cchHHHHHHH
Confidence 7531 11 122233444 235689999999999999987677899997 55554 4 69999999
Q ss_pred HHHHHHHc----C--eeEEeeCceecCCCcH----------HHHH----HHcCcc---cCCCCcccccccHHHHHHHHHH
Q 024143 213 AEKVILEF----G--GCVLRLAGLYKADRGA----------HVYW----LQKGTV---DSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 213 aE~~l~~~----~--~~IlRp~~iyG~~~~~----------~~~~----l~~g~~---~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
+|++++.+ + ++|+||+++|||+... +... +..|.. .+++++.++|||++|+|++++.
T Consensus 149 ~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~ 228 (319)
T 4b8w_A 149 IDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIW 228 (319)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHH
Confidence 99998763 4 7999999999997531 2223 445553 3678899999999999999988
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
++
T Consensus 229 ~~ 230 (319)
T 4b8w_A 229 VL 230 (319)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=192.03 Aligned_cols=185 Identities=15% Similarity=0.139 Sum_probs=131.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc--chhhhh----hCCceeeccCc-------cccCCCCEEEEec
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD--HHDELI----NMGITPSLKWT-------EATQKFPYVIFCA 150 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~--~~~~l~----~~~i~~~~~d~-------~~~~~~D~Vi~~a 150 (272)
|+|||||+ ||||++|+++|++++.+++|++++|.+. ....+. ..+++.+.+|. +++.++|+|||+|
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 83 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHLA 83 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEECC
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEECC
Confidence 68999996 9999999999999922289999998642 222222 12455555553 1356899999999
Q ss_pred CCCCCC----Ch-------HHHHHHHHH--HhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024143 151 PPSRSL----DY-------PGDVRLAAL--SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKV 216 (272)
Q Consensus 151 ~~~~~~----~~-------~~~~~~l~~--~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~ 216 (272)
+..... +. .....+++. ...+ .++|||+||.++||.....+++|+++..|. +.|+.+|+.+|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~--~~Y~~sK~~~e~~ 161 (336)
T 2hun_A 84 AESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPS--SPYSATKAASDML 161 (336)
T ss_dssp CCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCC--SHHHHHHHHHHHH
T ss_pred CCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCC--CccHHHHHHHHHH
Confidence 975311 11 122233331 2224 379999999999987655789999887776 8999999999999
Q ss_pred HHHc----C--eeEEeeCceecCCCcH------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 217 ILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 217 l~~~----~--~~IlRp~~iyG~~~~~------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++.+ + ++++||+++|||+... +...+.++.. .+++++.++++|++|+|++++.++
T Consensus 162 ~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~ 231 (336)
T 2hun_A 162 VLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVL 231 (336)
T ss_dssp HHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHH
Confidence 8764 4 7999999999997531 2223445543 366788899999999999998765
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=191.62 Aligned_cols=182 Identities=17% Similarity=0.135 Sum_probs=132.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-chhhhhhCCceeeccCc-------cccC--CCCEEEEecCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELINMGITPSLKWT-------EATQ--KFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-~~~~l~~~~i~~~~~d~-------~~~~--~~D~Vi~~a~~~ 153 (272)
|+|||||+ ||||++++++|+++ |++|++++|... ....+ ..+++.+.+|. ++++ ++|+|||+|+..
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~ 77 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLAR--GLEVAVLDNLATGKRENV-PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQA 77 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEECCCSSCCGGGS-CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCCcCchhhc-ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECcccc
Confidence 48999997 99999999999999 999999998543 22222 12455555553 1344 799999999865
Q ss_pred CC----CCh-------HHHHHHHH--HHhcCCCeEEEEecc-eeecC-CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 024143 154 RS----LDY-------PGDVRLAA--LSWNGEGSFLFTSSS-AIYDC-SDNGACDEDSPVVPIGRSPRTDVLLKAEKVIL 218 (272)
Q Consensus 154 ~~----~~~-------~~~~~~l~--~~~~gvkr~V~~SS~-~vYg~-~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~ 218 (272)
.. .+. .....+++ ....++++|||+||. .+|+. ....+++|+++..|. +.|+.+|+++|++++
T Consensus 78 ~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~--~~Y~~sK~~~e~~~~ 155 (311)
T 2p5y_A 78 SVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPK--SPYAASKAAFEHYLS 155 (311)
T ss_dssp CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC--SHHHHHHHHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC--ChHHHHHHHHHHHHH
Confidence 32 111 11223333 134578999999999 99986 444688999887776 799999999999987
Q ss_pred Hc----C--eeEEeeCceecCCCcH---------HHHHHHcCcc---c-----CCCCcccccccHHHHHHHHHHHh
Q 024143 219 EF----G--GCVLRLAGLYKADRGA---------HVYWLQKGTV---D-----SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 219 ~~----~--~~IlRp~~iyG~~~~~---------~~~~l~~g~~---~-----~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+ + ++++||+++|||+... +...+.++.+ . +++++.++|+|++|+|++++.++
T Consensus 156 ~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~ 231 (311)
T 2p5y_A 156 VYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALAL 231 (311)
T ss_dssp HHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHH
Confidence 53 3 8999999999997421 1223344543 3 56778899999999999998775
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-24 Score=189.43 Aligned_cols=173 Identities=12% Similarity=0.092 Sum_probs=128.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc----cccC--CCCEEEEecCCCCC--
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRS-- 155 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~----~~~~--~~D~Vi~~a~~~~~-- 155 (272)
|+|||||+ ||||++|+++|+ + |++|++++|++.. +.....|. ++++ ++|+|||+|+....
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~~~--------~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~ 69 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-P--VGNLIALDVHSKE--------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDK 69 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-T--TSEEEEECTTCSS--------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-c--CCeEEEecccccc--------ccccCCCHHHHHHHHHhcCCCEEEECcccCCHhh
Confidence 48999997 999999999999 8 9999999997621 11112222 2344 49999999987541
Q ss_pred --CCh-------HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--e
Q 024143 156 --LDY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--G 222 (272)
Q Consensus 156 --~~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~ 222 (272)
.+. .....+++. ...++ ||||+||.++|+.....+++|+++..|. +.|+.+|+++|++++++. +
T Consensus 70 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~~~~ 146 (299)
T 1n2s_A 70 AESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPL--NVYGKTKLAGEKALQDNCPKH 146 (299)
T ss_dssp HTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCS--SHHHHHHHHHHHHHHHHCSSE
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCc--cHHHHHHHHHHHHHHHhCCCe
Confidence 121 223344442 23455 8999999999997666689999988886 899999999999999876 8
Q ss_pred eEEeeCceecCCCcHH----HHHHHcCccc-CCCCcccccccHHHHHHHHHHHh
Q 024143 223 CVLRLAGLYKADRGAH----VYWLQKGTVD-SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 223 ~IlRp~~iyG~~~~~~----~~~l~~g~~~-~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++||+++||++...+ ...+.++.++ ..+++.++++|++|+|++++.++
T Consensus 147 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~ 200 (299)
T 1n2s_A 147 LIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAI 200 (299)
T ss_dssp EEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHH
T ss_pred EEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHH
Confidence 9999999999975422 2234445542 23568899999999999998775
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=192.21 Aligned_cols=184 Identities=10% Similarity=0.048 Sum_probs=134.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccC--CCCEEEEecCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQ--KFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~--~~D~Vi~~a~~~ 153 (272)
+|+|||||+ ||||++|+++|+++++|++|++++|++.+.... .+++.+.+|. ++++ ++|+|||+|+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~ 79 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVV--NSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL 79 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHH--HSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccccc--CCCceEEecCCCHHHHHHHHhhcCCCEEEECCccC
Confidence 368999997 999999999999864479999999986653321 2455555553 1344 899999999874
Q ss_pred CC---CCh-------HHHHHHHHH--HhcCCCeEEEEecceeecCCC-CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc
Q 024143 154 RS---LDY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSD-NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF 220 (272)
Q Consensus 154 ~~---~~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~-~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~ 220 (272)
.. .+. .....+++. ...++++|||+||.++|+... ..+.+|++|..|. ++|+.+|+++|++++.+
T Consensus 80 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~--~~Y~~sK~~~e~~~~~~ 157 (312)
T 2yy7_A 80 SATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS--TVYGISKQAGERWCEYY 157 (312)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC--SHHHHHHHHHHHHHHHH
T ss_pred CCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCC--chhHHHHHHHHHHHHHH
Confidence 31 111 122334432 345789999999999998643 3578898887776 89999999999998764
Q ss_pred ----C--eeEEeeCceecCCC----c---HH----HHHHHcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 221 ----G--GCVLRLAGLYKADR----G---AH----VYWLQKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 221 ----~--~~IlRp~~iyG~~~----~---~~----~~~l~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+ ++++||+++||++. . .. ...+..+.+ ++.+++.++|||++|+|++++.++
T Consensus 158 ~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 227 (312)
T 2yy7_A 158 HNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIM 227 (312)
T ss_dssp HHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHH
Confidence 4 79999999999642 1 11 112444543 467788999999999999998875
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-24 Score=192.59 Aligned_cols=184 Identities=16% Similarity=0.100 Sum_probs=129.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-c----hhhhhhC-CceeeccCc-------cccCC--CCEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-H----HDELINM-GITPSLKWT-------EATQK--FPYVI 147 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-~----~~~l~~~-~i~~~~~d~-------~~~~~--~D~Vi 147 (272)
||+|||||+ ||||++|+++|+++ |++|++++|... . ...+... .++.+.+|. +++++ +|+||
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 78 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCF 78 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC--CCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEE
Confidence 679999996 99999999999999 999999998532 1 1222222 355665553 13455 99999
Q ss_pred EecCCCCCC----Ch-------HHHHHHHHH--HhcCCC-eEEEEecceeecCCCCC----------------CCCCCCC
Q 024143 148 FCAPPSRSL----DY-------PGDVRLAAL--SWNGEG-SFLFTSSSAIYDCSDNG----------------ACDEDSP 197 (272)
Q Consensus 148 ~~a~~~~~~----~~-------~~~~~~l~~--~~~gvk-r~V~~SS~~vYg~~~~~----------------~~~E~~p 197 (272)
|+|+..... ++ .....+++. ...+++ +|||+||.++|+..... +++|+++
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~ 158 (347)
T 1orr_A 79 HLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQ 158 (347)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSC
T ss_pred ECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCC
Confidence 999975321 11 122233331 234665 99999999999864322 3677777
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCc------HH---HHHHHcCc-----c---cCCCCcc
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG------AH---VYWLQKGT-----V---DSRPDHI 254 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~------~~---~~~l~~g~-----~---~~~~~~~ 254 (272)
..|. +.|+.+|+.+|++++.+ + ++++||+++||++.. .+ ...+.++. + .+++++.
T Consensus 159 ~~~~--~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 236 (347)
T 1orr_A 159 LDFH--SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQV 236 (347)
T ss_dssp CCCC--HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCE
T ss_pred CCCC--CchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcce
Confidence 6665 79999999999998875 4 799999999999642 11 12222332 2 3678899
Q ss_pred cccccHHHHHHHHHHHh
Q 024143 255 LNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 255 ~~~I~v~Dva~ai~~a~ 271 (272)
++|||++|+|++++.++
T Consensus 237 ~~~i~v~Dva~a~~~~~ 253 (347)
T 1orr_A 237 RDVLHAEDMISLYFTAL 253 (347)
T ss_dssp EECEEHHHHHHHHHHHH
T ss_pred EeeEEHHHHHHHHHHHH
Confidence 99999999999998765
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.7e-24 Score=191.05 Aligned_cols=184 Identities=14% Similarity=0.064 Sum_probs=132.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc----------hhhhh---hCCceeeccCc-------cccC-
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH----------HDELI---NMGITPSLKWT-------EATQ- 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~----------~~~l~---~~~i~~~~~d~-------~~~~- 141 (272)
+|+|||||+ ||||++|+++|+++ |++|++++|.... ...+. ..+++.+.+|. ++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh
Confidence 468999996 99999999999999 9999999986432 11221 23456665553 1344
Q ss_pred -CCCEEEEecCCCCCC----Ch-------HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC-CCCChH
Q 024143 142 -KFPYVIFCAPPSRSL----DY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP-IGRSPR 206 (272)
Q Consensus 142 -~~D~Vi~~a~~~~~~----~~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p-~~~~~y 206 (272)
++|+|||+|+..... +. .....+++ ....++++|||+||.++|+.....+++|+++..| . +.|
T Consensus 80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~--~~Y 157 (348)
T 1ek6_A 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCT--NPY 157 (348)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS--SHH
T ss_pred cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCC--Cch
Confidence 799999999975321 11 12223333 2345789999999999998766678999998777 4 799
Q ss_pred HHHHHHHHHHHHHc-------CeeEEeeCceecCCC------------cHHH----HHHH-cCcc---cC------CCCc
Q 024143 207 TDVLLKAEKVILEF-------GGCVLRLAGLYKADR------------GAHV----YWLQ-KGTV---DS------RPDH 253 (272)
Q Consensus 207 ~~sk~~aE~~l~~~-------~~~IlRp~~iyG~~~------------~~~~----~~l~-~g~~---~~------~~~~ 253 (272)
+.+|+.+|++++.+ .++++||+++|||+. ..+. ..+. ++.. .+ ++++
T Consensus 158 ~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 237 (348)
T 1ek6_A 158 GKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237 (348)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSC
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCce
Confidence 99999999998763 279999999999841 1121 1122 3432 22 5678
Q ss_pred ccccccHHHHHHHHHHHh
Q 024143 254 ILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 254 ~~~~I~v~Dva~ai~~a~ 271 (272)
.++|||++|+|++++.++
T Consensus 238 ~~~~i~v~Dva~a~~~~~ 255 (348)
T 1ek6_A 238 VRDYIHVVDLAKGHIAAL 255 (348)
T ss_dssp EECEEEHHHHHHHHHHHH
T ss_pred EEeeEEHHHHHHHHHHHH
Confidence 899999999999998775
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=192.62 Aligned_cols=185 Identities=15% Similarity=0.141 Sum_probs=133.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-hCCceeeccCc--------cccCCCCEEEEecCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWT--------EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-~~~i~~~~~d~--------~~~~~~D~Vi~~a~~~~ 154 (272)
|+|||||+ ||||++|+++|+++ +|++|++++|++.+...+. ..+++.+.+|. ++++++|+|||||+...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~ 79 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIAT 79 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHS-TTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHh-CCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccC
Confidence 58999997 99999999999986 2699999999877654432 23556655543 13458999999998654
Q ss_pred CC----Ch-------HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCC---CC--CCChHHHHHHHHHHH
Q 024143 155 SL----DY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV---PI--GRSPRTDVLLKAEKV 216 (272)
Q Consensus 155 ~~----~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~---p~--~~~~y~~sk~~aE~~ 216 (272)
.. +. .....+++. ...+ ++|||+||.++|+.....+++|+++.. |. +.+.|+.+|+.+|++
T Consensus 80 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~ 158 (345)
T 2bll_A 80 PIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV 158 (345)
T ss_dssp HHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHH
T ss_pred ccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHH
Confidence 21 11 112233331 2446 899999999999976566788887542 21 125899999999999
Q ss_pred HHHc----C--eeEEeeCceecCCCc--------------HHHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 217 ILEF----G--GCVLRLAGLYKADRG--------------AHVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 217 l~~~----~--~~IlRp~~iyG~~~~--------------~~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++.+ + ++++||+++|||+.. .+...+.+|.+ .+.+++.++|||++|+|++++.++
T Consensus 159 ~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~ 236 (345)
T 2bll_A 159 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII 236 (345)
T ss_dssp HHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHH
Confidence 8754 3 899999999999742 11223445543 356788999999999999998875
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-24 Score=196.40 Aligned_cols=185 Identities=12% Similarity=0.046 Sum_probs=129.7
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch-----------------hhh------hhCCceeeccCc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-----------------DEL------INMGITPSLKWT 137 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~-----------------~~l------~~~~i~~~~~d~ 137 (272)
..|++|||||+ ||||++|+++|+++ |++|++++|..... +.+ ...+++.+.+|.
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl 86 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI 86 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhC--CCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCC
Confidence 46789999996 99999999999999 99999998863221 011 123556666653
Q ss_pred ---c----ccCC--CCEEEEecCCCCC----CC----------hHHHHHHHHH--HhcCC-CeEEEEecceeecCCCCCC
Q 024143 138 ---E----ATQK--FPYVIFCAPPSRS----LD----------YPGDVRLAAL--SWNGE-GSFLFTSSSAIYDCSDNGA 191 (272)
Q Consensus 138 ---~----~~~~--~D~Vi~~a~~~~~----~~----------~~~~~~~l~~--~~~gv-kr~V~~SS~~vYg~~~~~~ 191 (272)
+ ++++ +|+|||+|+.... .+ .+..+.+++. ...++ ++|||+||.++||... .+
T Consensus 87 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~ 165 (404)
T 1i24_A 87 CDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-ID 165 (404)
T ss_dssp TSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SC
T ss_pred CCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CC
Confidence 1 3444 9999999986431 11 0112233331 23466 6999999999998653 56
Q ss_pred CCCC--------------CCCCCCCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCc---------------
Q 024143 192 CDED--------------SPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG--------------- 236 (272)
Q Consensus 192 ~~E~--------------~p~~p~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~--------------- 236 (272)
++|+ .+..|. ++|+.+|+.+|++++.+ + ++++||+++|||+..
T Consensus 166 ~~E~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~ 243 (404)
T 1i24_A 166 IEEGYITITHNGRTDTLPYPKQAS--SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYD 243 (404)
T ss_dssp BCSSEEEEEETTEEEEEECCCCCC--SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCS
T ss_pred CCccccccccccccccccCCCCCC--ChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccc
Confidence 7775 344554 79999999999988764 4 799999999999742
Q ss_pred -----H---HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 237 -----A---HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 237 -----~---~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
. +...+.+|++ .+++++.++|||++|+|++++.++
T Consensus 244 ~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l 289 (404)
T 1i24_A 244 AVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAI 289 (404)
T ss_dssp TTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHH
Confidence 1 2223445553 367788999999999999998876
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.4e-24 Score=192.25 Aligned_cols=183 Identities=13% Similarity=0.098 Sum_probs=131.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCC-CeEEEEecCCcch--hhhhhCCceeeccCc----cccC-----CCCEEEEec
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHH--DELINMGITPSLKWT----EATQ-----KFPYVIFCA 150 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~--~~l~~~~i~~~~~d~----~~~~-----~~D~Vi~~a 150 (272)
.|+|||||+ ||||++|+++|+++ | ++|++++|.+... ..+....+.....|. .+++ ++|+|||+|
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A 123 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEG 123 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHT--TCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEECC
Confidence 368999997 99999999999999 9 9999999976542 222111111222221 1333 599999999
Q ss_pred CCCCC--CCh-------HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Q 024143 151 PPSRS--LDY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE 219 (272)
Q Consensus 151 ~~~~~--~~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~ 219 (272)
+.... .+. .....+++. ...++ +|||+||.++|+.....+++|+++..|. +.|+.+|+++|++++.
T Consensus 124 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~ 200 (357)
T 2x6t_A 124 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL--NVFGYSKFLFDEYVRQ 200 (357)
T ss_dssp SCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCS--SHHHHHHHHHHHHHHH
T ss_pred cccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCC--ChhHHHHHHHHHHHHH
Confidence 97542 221 222334432 23577 9999999999987655689999988776 8999999999999987
Q ss_pred c----C--eeEEeeCceecCCCc-------H---HHHHHHcCcc---cCCCCc-ccccccHHHHHHHHHHHh
Q 024143 220 F----G--GCVLRLAGLYKADRG-------A---HVYWLQKGTV---DSRPDH-ILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 220 ~----~--~~IlRp~~iyG~~~~-------~---~~~~l~~g~~---~~~~~~-~~~~I~v~Dva~ai~~a~ 271 (272)
+ + ++++||+++|||+.. . +...+.++.. .++++. .++|+|++|+|++++.++
T Consensus 201 ~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~ 272 (357)
T 2x6t_A 201 ILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL 272 (357)
T ss_dssp HGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHH
Confidence 5 2 799999999999753 1 1223455543 356677 899999999999998875
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.7e-24 Score=193.42 Aligned_cols=183 Identities=14% Similarity=0.106 Sum_probs=132.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHH-hcCCCCeEEEEecCCcc---------hhhhhh-----------CC---ceeeccCc--
Q 024143 85 NDLLIVGP-GVLGRLVAEQWR-QEHPGCQIYGQTMTADH---------HDELIN-----------MG---ITPSLKWT-- 137 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~-~~~~g~~V~~~~R~~~~---------~~~l~~-----------~~---i~~~~~d~-- 137 (272)
|+|||||+ ||||++|+++|+ ++ |++|++++|.... ...+.. .+ ++.+.+|.
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 80 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDT--NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhC--CCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence 58999996 999999999999 99 9999999997544 223311 13 55665653
Q ss_pred -----cccC--C-CCEEEEecCCCCCC----Ch-------HHHHHHHH--HHhcCCCeEEEEecceeecCCC-------C
Q 024143 138 -----EATQ--K-FPYVIFCAPPSRSL----DY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSD-------N 189 (272)
Q Consensus 138 -----~~~~--~-~D~Vi~~a~~~~~~----~~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~-------~ 189 (272)
++++ + +|+|||+|+..... ++ .....+++ ....++++|||+||.++|+... .
T Consensus 81 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccc
Confidence 1333 5 99999999975421 11 12223333 2345789999999999998754 4
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCC-----------cHHHH--------HHHc
Q 024143 190 GACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADR-----------GAHVY--------WLQK 244 (272)
Q Consensus 190 ~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~-----------~~~~~--------~l~~ 244 (272)
.+++|+++..|. +.|+.+|+.+|++++.+ + ++++||+++|||+. ..+.. .+..
T Consensus 161 ~~~~E~~~~~p~--~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T 1gy8_A 161 EPIDINAKKSPE--SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP 238 (397)
T ss_dssp CCBCTTSCCBCS--SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSC
T ss_pred cCcCccCCCCCC--CchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHh
Confidence 689999988776 89999999999998874 4 79999999999952 11221 2223
Q ss_pred Cc-------------c--cC------CCCcccccccHHHHHHHHHHHh
Q 024143 245 GT-------------V--DS------RPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 245 g~-------------~--~~------~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+. + ++ ++++.++|||++|+|++++.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l 286 (397)
T 1gy8_A 239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILAL 286 (397)
T ss_dssp C-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHH
T ss_pred cCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHH
Confidence 32 1 12 5678899999999999998875
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=8.6e-24 Score=192.65 Aligned_cols=183 Identities=19% Similarity=0.099 Sum_probs=133.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-----hhhh-------hhCCceeeccCc---c----ccC--C
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDEL-------INMGITPSLKWT---E----ATQ--K 142 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-----~~~l-------~~~~i~~~~~d~---~----~~~--~ 142 (272)
++|||||+ ||||++|+++|+++ |++|++++|++.. ...+ ...+++.+.+|. + +++ +
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 102 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK 102 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred cEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcC
Confidence 78999996 99999999999999 9999999997643 2222 112455555553 1 233 4
Q ss_pred CCEEEEecCCCCCC----Ch-------HHHHHHHHH--HhcCC---CeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 143 FPYVIFCAPPSRSL----DY-------PGDVRLAAL--SWNGE---GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~----~~-------~~~~~~l~~--~~~gv---kr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
+|+|||||+..... +. .....+++. ...++ ++|||+||.++|+.....+++|+++..|. +.|
T Consensus 103 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~--~~Y 180 (375)
T 1t2a_A 103 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPR--SPY 180 (375)
T ss_dssp CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCC--SHH
T ss_pred CCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCC--Chh
Confidence 79999999975421 11 112233331 23456 89999999999987656789999988776 899
Q ss_pred HHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH---------HHHHHHcCc-c---cCCCCcccccccHHHHHHHH
Q 024143 207 TDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA---------HVYWLQKGT-V---DSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 207 ~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~---------~~~~l~~g~-~---~~~~~~~~~~I~v~Dva~ai 267 (272)
+.+|+.+|.+++.+ + ++++||+++|||+... +...+.+|. + ++++++.++|||++|+|+++
T Consensus 181 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~ 260 (375)
T 1t2a_A 181 GAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM 260 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHH
Confidence 99999999998764 4 7899999999996431 111234453 2 36778999999999999999
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 261 ~~~~ 264 (375)
T 1t2a_A 261 WLML 264 (375)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.8e-24 Score=179.25 Aligned_cols=181 Identities=11% Similarity=0.026 Sum_probs=113.9
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-----cccCCCCEEEEecCCCCCC--
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----EATQKFPYVIFCAPPSRSL-- 156 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-----~~~~~~D~Vi~~a~~~~~~-- 156 (272)
|||||||+ |+||++|+++|+++ |++|++++|++++...+. .+++.+.+|. +++.++|+|||+++.....
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAE 77 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTT
T ss_pred CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcCCccccc
Confidence 58999996 99999999999999 999999999988776654 5677776664 2577999999999975322
Q ss_pred ChHHHHHHHHH--HhcCCCeEEEEecceeec-CCCCCCCCCCCCCCCCCCChHHHHHHHHHHH--HH--HcC--eeEEee
Q 024143 157 DYPGDVRLAAL--SWNGEGSFLFTSSSAIYD-CSDNGACDEDSPVVPIGRSPRTDVLLKAEKV--IL--EFG--GCVLRL 227 (272)
Q Consensus 157 ~~~~~~~~l~~--~~~gvkr~V~~SS~~vYg-~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~--l~--~~~--~~IlRp 227 (272)
......++++. ...+++|+|++||.++|. .....+..|+++..|. +.|+.+|...|.+ +. +.+ ++++||
T Consensus 78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~--~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp 155 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREA--PYYPTARAQAKQLEHLKSHQAEFSWTYISP 155 (221)
T ss_dssp SHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------C--CCSCCHHHHHHHHHHHHTTTTTSCEEEEEC
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCH--HHHHHHHHHHHHHHHHHhhccCccEEEEeC
Confidence 13455566552 345689999999987654 3333467777776665 6788888888876 55 344 899999
Q ss_pred CceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 228 AGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 228 ~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++||++.......+....+... ....++||++|+|++++.++
T Consensus 156 ~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~i~~~Dva~~~~~~l 198 (221)
T 3ew7_A 156 SAMFEPGERTGDYQIGKDHLLFG-SDGNSFISMEDYAIAVLDEI 198 (221)
T ss_dssp SSCCCCC----------------------CCCHHHHHHHHHHHH
T ss_pred cceecCCCccCceEeccccceec-CCCCceEeHHHHHHHHHHHH
Confidence 99999853221112222222111 12236999999999999876
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=190.01 Aligned_cols=184 Identities=18% Similarity=0.135 Sum_probs=131.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-----hhhhh------hCCceeeccCc---c----ccC--C
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI------NMGITPSLKWT---E----ATQ--K 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-----~~~l~------~~~i~~~~~d~---~----~~~--~ 142 (272)
||+|||||+ ||||++++++|+++ |++|++++|++.. ...+. ..+++.+.+|. + +++ +
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ 78 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcC
Confidence 679999996 99999999999999 9999999997643 11111 12455555553 1 233 4
Q ss_pred CCEEEEecCCCCC----CChH-------HHHHHHHH--HhcCC---CeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 143 FPYVIFCAPPSRS----LDYP-------GDVRLAAL--SWNGE---GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 143 ~D~Vi~~a~~~~~----~~~~-------~~~~~l~~--~~~gv---kr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
+|+|||+|+.... .+.. ....+++. ...++ ++|||+||.++|+.....+++|+++..|. +.|
T Consensus 79 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~--~~Y 156 (372)
T 1db3_A 79 PDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR--SPY 156 (372)
T ss_dssp CSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCC--SHH
T ss_pred CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCC--ChH
Confidence 7999999986432 1211 12233331 23466 89999999999987655689999988776 899
Q ss_pred HHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH---------HHHHHHcCcc----cCCCCcccccccHHHHHHHH
Q 024143 207 TDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA---------HVYWLQKGTV----DSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 207 ~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~---------~~~~l~~g~~----~~~~~~~~~~I~v~Dva~ai 267 (272)
+.+|+.+|.+++.+ + ++++|+.++|||+... +...+.+|.. .+++++.++|||++|+|+++
T Consensus 157 ~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~ 236 (372)
T 1db3_A 157 AVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ 236 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHH
Confidence 99999999998764 3 6899999999997431 1112345542 36778999999999999999
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 237 ~~~~ 240 (372)
T 1db3_A 237 WMML 240 (372)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 8876
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=187.58 Aligned_cols=185 Identities=16% Similarity=0.018 Sum_probs=130.5
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-------CCceee-ccCc-------cccCCCCE
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPS-LKWT-------EATQKFPY 145 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-------~~i~~~-~~d~-------~~~~~~D~ 145 (272)
...++|||||+ ||||++|+++|+++ |++|++++|++++...+.. .+++.+ .+|. ++++++|+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 86 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence 34578999997 99999999999999 9999999998665443321 245555 4543 24568999
Q ss_pred EEEecCCCCCC-Ch-------HHHHHHHHH-H--hcCCCeEEEEecceeecCCC----CCCCCCCCC-------------
Q 024143 146 VIFCAPPSRSL-DY-------PGDVRLAAL-S--WNGEGSFLFTSSSAIYDCSD----NGACDEDSP------------- 197 (272)
Q Consensus 146 Vi~~a~~~~~~-~~-------~~~~~~l~~-~--~~gvkr~V~~SS~~vYg~~~----~~~~~E~~p------------- 197 (272)
|||+|+..... +. .....+++. + ..++++|||+||.++|+... +.+++|+++
T Consensus 87 vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~ 166 (342)
T 1y1p_A 87 VAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPE 166 (342)
T ss_dssp EEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCT
T ss_pred EEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccc
Confidence 99999975432 21 222333432 2 24689999999999986432 257888862
Q ss_pred ---CCCCCCChHHHHHHHHHHHHHHc------C--eeEEeeCceecCCCcH---------HHHHHHcCcc---cCCCCcc
Q 024143 198 ---VVPIGRSPRTDVLLKAEKVILEF------G--GCVLRLAGLYKADRGA---------HVYWLQKGTV---DSRPDHI 254 (272)
Q Consensus 198 ---~~p~~~~~y~~sk~~aE~~l~~~------~--~~IlRp~~iyG~~~~~---------~~~~l~~g~~---~~~~~~~ 254 (272)
..|. +.|+.+|+.+|++++.+ + ++++||+++||+.... +...+.+|+. .+.+ ..
T Consensus 167 ~~~~~~~--~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 243 (342)
T 1y1p_A 167 SDPQKSL--WVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PP 243 (342)
T ss_dssp TSTTHHH--HHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CS
T ss_pred cccccch--HHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-Cc
Confidence 2233 68999999999998764 3 6789999999996431 1223445554 2333 67
Q ss_pred cccccHHHHHHHHHHHh
Q 024143 255 LNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 255 ~~~I~v~Dva~ai~~a~ 271 (272)
++|+|++|+|++++.++
T Consensus 244 ~~~v~v~Dva~a~~~~~ 260 (342)
T 1y1p_A 244 QYYVSAVDIGLLHLGCL 260 (342)
T ss_dssp EEEEEHHHHHHHHHHHH
T ss_pred CCEeEHHHHHHHHHHHH
Confidence 89999999999998775
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-23 Score=186.92 Aligned_cols=187 Identities=17% Similarity=0.111 Sum_probs=134.7
Q ss_pred CCCCcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--CCceeeccCc-------cccC--CCCE
Q 024143 78 SSGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT-------EATQ--KFPY 145 (272)
Q Consensus 78 ~~~~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--~~i~~~~~d~-------~~~~--~~D~ 145 (272)
.|..+..|+|||||+ ||||++|+++|+++ |++|++++|+......+.. .+++.+.+|. ++++ ++|+
T Consensus 14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 91 (330)
T 2pzm_A 14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQ--GHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTH 91 (330)
T ss_dssp CCSTTTCCEEEEETTTSHHHHHHHHHHGGG--TCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CcccCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence 345566689999997 99999999999999 9999999996544321111 2455555553 2455 8999
Q ss_pred EEEecCCCCCC---Ch-----HHHHHHHHH--HhcCCCeEEEEecceeecCCCCC--CCCCCCCCCCCCCChHHHHHHHH
Q 024143 146 VIFCAPPSRSL---DY-----PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNG--ACDEDSPVVPIGRSPRTDVLLKA 213 (272)
Q Consensus 146 Vi~~a~~~~~~---~~-----~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~--~~~E~~p~~p~~~~~y~~sk~~a 213 (272)
|||||+..... ++ .....+++. ...++++|||+||.++|+..... +++|++ .|. +.|+.+|+.+
T Consensus 92 vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~--~~Y~~sK~~~ 167 (330)
T 2pzm_A 92 VVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APF--TSYGISKTAG 167 (330)
T ss_dssp EEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCC--SHHHHHHHHH
T ss_pred EEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCC--ChHHHHHHHH
Confidence 99999975431 11 122233331 24578999999999999865333 788887 444 7999999999
Q ss_pred HHHHHHcC--eeEEeeCceecCCCc-HH----HHHHHcCcc-cCCCCcccccccHHHHHH-HHHHHh
Q 024143 214 EKVILEFG--GCVLRLAGLYKADRG-AH----VYWLQKGTV-DSRPDHILNLIHYEVNTL-VLFIAS 271 (272)
Q Consensus 214 E~~l~~~~--~~IlRp~~iyG~~~~-~~----~~~l~~g~~-~~~~~~~~~~I~v~Dva~-ai~~a~ 271 (272)
|++++.++ ++++||+++|||+.. .+ ...+.++.. ++++. .++++|++|+|+ +++.++
T Consensus 168 e~~~~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~a~~~~~ 233 (330)
T 2pzm_A 168 EAFLMMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFLAIADLSLQ 233 (330)
T ss_dssp HHHHHTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTCCCCEESC-EECEEEHHHHHHHHHHHTS
T ss_pred HHHHHHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCCEEeCCCC-EecceeHHHHHHHHHHHHh
Confidence 99999876 899999999999852 12 122344432 34555 889999999999 988775
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7.9e-24 Score=188.21 Aligned_cols=177 Identities=19% Similarity=0.194 Sum_probs=121.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc----cccC--CCCEEEEecCCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRSL 156 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~----~~~~--~~D~Vi~~a~~~~~~ 156 (272)
+|+|||||+ ||||++|+++|+++ |++|++++|++... . -+.....|. ++++ ++|+|||||+.....
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~----~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~ 74 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQN--NWHAVGCGFRRARP----K-FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPD 74 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEC-----------------------CHHHHHHHCCSEEEECC------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhC--CCeEEEEccCCCCC----C-eEEecCCCHHHHHHHHHhhCCCEEEECCcccChh
Confidence 468999997 99999999999999 99999999875431 0 111111222 1333 489999999864311
Q ss_pred ----C-------hHHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--
Q 024143 157 ----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-- 221 (272)
Q Consensus 157 ----~-------~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~-- 221 (272)
+ ......+++. ...++ +|||+||..+|+. ...+++|+++..|. +.|+.+|+.+|++++.++
T Consensus 75 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~--~~Y~~sK~~~e~~~~~~~~~ 150 (315)
T 2ydy_A 75 VVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPL--NLYGKTKLDGEKAVLENNLG 150 (315)
T ss_dssp -------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCC--SHHHHHHHHHHHHHHHHCTT
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCc--CHHHHHHHHHHHHHHHhCCC
Confidence 1 1223344431 23455 9999999999987 45789999988776 899999999999999876
Q ss_pred eeEEeeCceecCCCc-------HHHHHHH-cCcc-cCCCCcccccccHHHHHHHHHHHh
Q 024143 222 GCVLRLAGLYKADRG-------AHVYWLQ-KGTV-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 ~~IlRp~~iyG~~~~-------~~~~~l~-~g~~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++++||+.+||+... .+...+. .+.. ...++..++++|++|+|++++.++
T Consensus 151 ~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 209 (315)
T 2ydy_A 151 AAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLA 209 (315)
T ss_dssp CEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHH
T ss_pred eEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHH
Confidence 899999999998754 1223344 5554 234578899999999999998765
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=177.47 Aligned_cols=180 Identities=8% Similarity=-0.006 Sum_probs=128.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-----cccCCCCEEEEecCCCCCCC-
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----EATQKFPYVIFCAPPSRSLD- 157 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-----~~~~~~D~Vi~~a~~~~~~~- 157 (272)
|||||||+ |+||++|+++|+++ |++|++++|++++...+...+++.+.+|. +++.++|+|||+|+......
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR--GHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC--CCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcch
Confidence 47999997 99999999999999 99999999998877766556777777664 25779999999999752211
Q ss_pred ---hHHHHHHHHH--HhcCCCeEEEEecceeecC-CCC--CCCCCCCCCCCCCCChHHHHHHHHHHHHH---HcC--eeE
Q 024143 158 ---YPGDVRLAAL--SWNGEGSFLFTSSSAIYDC-SDN--GACDEDSPVVPIGRSPRTDVLLKAEKVIL---EFG--GCV 224 (272)
Q Consensus 158 ---~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~-~~~--~~~~E~~p~~p~~~~~y~~sk~~aE~~l~---~~~--~~I 224 (272)
.....++++. ...+ +|||++||.++|.. ... .+.+|.....|. +.|+.+|..+|.+.. +.+ +++
T Consensus 79 ~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~--~~y~~sK~~~e~~~~~~~~~~i~~~i 155 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQ--PWYDGALYQYYEYQFLQMNANVNWIG 155 (224)
T ss_dssp THHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS--TTHHHHHHHHHHHHHHTTCTTSCEEE
T ss_pred hhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccc--hhhHHHHHHHHHHHHHHhcCCCcEEE
Confidence 2344455552 3456 99999999865543 222 245555444444 789999999996522 223 899
Q ss_pred EeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 225 LRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 225 lRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+||+.+||++.... .. ........++...++||++|+|++++.++
T Consensus 156 vrp~~v~g~~~~~~-~~-~~~~~~~~~~~~~~~i~~~DvA~~~~~~l 200 (224)
T 3h2s_A 156 ISPSEAFPSGPATS-YV-AGKDTLLVGEDGQSHITTGNMALAILDQL 200 (224)
T ss_dssp EEECSBCCCCCCCC-EE-EESSBCCCCTTSCCBCCHHHHHHHHHHHH
T ss_pred EcCccccCCCcccC-ce-ecccccccCCCCCceEeHHHHHHHHHHHh
Confidence 99999999854221 11 11112233456678999999999999876
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=8.2e-24 Score=186.15 Aligned_cols=171 Identities=18% Similarity=0.126 Sum_probs=127.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc----cccC--CCCEEEEecCCCCC-
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRS- 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~----~~~~--~~D~Vi~~a~~~~~- 155 (272)
.++|||||+ ||||++|+++|+++ |++|++++|+.... .|. ++++ ++|+|||+|+....
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~Dl------------~d~~~~~~~~~~~~~d~vih~A~~~~~~ 77 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGK--NVEVIPTDVQDLDI------------TNVLAVNKFFNEKKPNVVINCAAHTAVD 77 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTTCCT------------TCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred cceEEEECCCChHHHHHHHHHHhC--CCeEEeccCccCCC------------CCHHHHHHHHHhcCCCEEEECCccCCHH
Confidence 368999996 99999999999999 99999999963211 111 2344 79999999997542
Q ss_pred ---CCh-------HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--
Q 024143 156 ---LDY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-- 221 (272)
Q Consensus 156 ---~~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~-- 221 (272)
.++ .....+++. ...++ +|||+||.++|+.....+++|+++..|. +.|+.+|+++|++++.++
T Consensus 78 ~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~--~~Y~~sK~~~E~~~~~~~~~ 154 (292)
T 1vl0_A 78 KCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQ--SAYGKTKLEGENFVKALNPK 154 (292)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHCSS
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCc--cHHHHHHHHHHHHHHhhCCC
Confidence 111 122233331 23466 9999999999987655789999988776 899999999999999876
Q ss_pred eeEEeeCceecCCCcHHH---HHHHcCccc-CCCCcccccccHHHHHHHHHHHh
Q 024143 222 GCVLRLAGLYKADRGAHV---YWLQKGTVD-SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 ~~IlRp~~iyG~~~~~~~---~~l~~g~~~-~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++++||+.+||++...+. ..+..+... ..++..++++|++|+|++++.++
T Consensus 155 ~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~ 208 (292)
T 1vl0_A 155 YYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVI 208 (292)
T ss_dssp EEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHH
T ss_pred eEEEeeeeeeCCCcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHH
Confidence 899999999999433221 223445432 23467899999999999998775
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7.1e-24 Score=188.81 Aligned_cols=174 Identities=14% Similarity=0.105 Sum_probs=126.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc----cccC--CCCEEEEecCCCCC-
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRS- 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~----~~~~--~~D~Vi~~a~~~~~- 155 (272)
+|+|||||+ ||||++|+++|+++ |++|++++|+.. ....|. ++++ ++|+|||+|+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~--g~~v~~~~r~~~-----------~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~ 69 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRDE-----------LNLLDSRAVHDFFASERIDQVYLAAAKVGGI 69 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTTT-----------CCTTCHHHHHHHHHHHCCSEEEECCCCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEecCcc-----------CCccCHHHHHHHHHhcCCCEEEEcCeecCCc
Confidence 368999996 99999999999999 999999887531 011121 2445 89999999997542
Q ss_pred ----CCh-------HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCC----CCCCCCCChHHHHHHHHHHHHH
Q 024143 156 ----LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS----PVVPIGRSPRTDVLLKAEKVIL 218 (272)
Q Consensus 156 ----~~~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~----p~~p~~~~~y~~sk~~aE~~l~ 218 (272)
.+. .....+++ ....++++|||+||.++|+.....+++|++ +..|. .+.|+.+|+.+|++++
T Consensus 70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~-~~~Y~~sK~~~E~~~~ 148 (321)
T 1e6u_A 70 VANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPT-NEPYAIAKIAGIKLCE 148 (321)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGG-GHHHHHHHHHHHHHHH
T ss_pred chhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCC-CCccHHHHHHHHHHHH
Confidence 111 12233343 234678999999999999976567888987 33342 1489999999999998
Q ss_pred Hc----C--eeEEeeCceecCCCc------H----HHHHHH----cC-cc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 219 EF----G--GCVLRLAGLYKADRG------A----HVYWLQ----KG-TV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 219 ~~----~--~~IlRp~~iyG~~~~------~----~~~~l~----~g-~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++ + ++++||+++|||+.. . +...+. .| .. .+.++..++|||++|+|++++.++
T Consensus 149 ~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~ 225 (321)
T 1e6u_A 149 SYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVM 225 (321)
T ss_dssp HHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHH
Confidence 74 4 899999999999753 1 122232 23 22 367889999999999999998875
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-23 Score=186.64 Aligned_cols=184 Identities=14% Similarity=0.100 Sum_probs=132.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC--cchhhhhh----CCceeeccCc-------cccC--CCCEEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA--DHHDELIN----MGITPSLKWT-------EATQ--KFPYVIF 148 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~--~~~~~l~~----~~i~~~~~d~-------~~~~--~~D~Vi~ 148 (272)
|||||||+ ||||++|+++|+++ +|++|++++|.+ .....+.. .+++.+.+|. ++++ ++|+|||
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKN-TQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHH-CSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhc-CCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence 47999996 99999999999996 259999999864 22222221 2455555553 1344 8999999
Q ss_pred ecCCCCCC----Ch-------HHHHHHHHH--Hhc--CCC-------eEEEEecceeecCCCC--C--------CCCCCC
Q 024143 149 CAPPSRSL----DY-------PGDVRLAAL--SWN--GEG-------SFLFTSSSAIYDCSDN--G--------ACDEDS 196 (272)
Q Consensus 149 ~a~~~~~~----~~-------~~~~~~l~~--~~~--gvk-------r~V~~SS~~vYg~~~~--~--------~~~E~~ 196 (272)
+|+..... ++ .....+++. ... +++ +|||+||.++||.... . +++|++
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~ 159 (361)
T 1kew_A 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence 99975311 11 122333331 233 666 9999999999986431 1 789998
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH------HHHHHHcCcc---cCCCCcccccccHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYE 261 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~------~~~~l~~g~~---~~~~~~~~~~I~v~ 261 (272)
|..|. +.|+.+|+.+|++++.+ + ++++||+++|||+... +...+.++.. .+++++.++++|++
T Consensus 160 ~~~~~--~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 237 (361)
T 1kew_A 160 AYAPS--SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237 (361)
T ss_dssp CCCCC--SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHH
T ss_pred CCCCC--CccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHH
Confidence 87776 89999999999998874 4 7999999999997531 1223444543 36778899999999
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++.++
T Consensus 238 Dva~a~~~~~ 247 (361)
T 1kew_A 238 DHARALHMVV 247 (361)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998775
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=199.24 Aligned_cols=178 Identities=12% Similarity=0.038 Sum_probs=129.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC--ccccCCCCEEEEecCCCCCC----
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW--TEATQKFPYVIFCAPPSRSL---- 156 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d--~~~~~~~D~Vi~~a~~~~~~---- 156 (272)
||+|||||+ ||||++|+++|+++ |++|++++|++.+... +.....+ .+++.++|+|||||+.....
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~--G~~V~~l~R~~~~~~~-----v~~d~~~~~~~~l~~~D~Vih~A~~~~~~~~~~ 219 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG--GHEVIQLVRKEPKPGK-----RFWDPLNPASDLLDGADVLVHLAGEPIFGRFND 219 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSSCCTTC-----EECCTTSCCTTTTTTCSEEEECCCC-----CCG
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCCccc-----eeecccchhHHhcCCCCEEEECCCCccccccch
Confidence 689999996 99999999999999 9999999998766421 2222112 24678999999999975321
Q ss_pred C--------hHHHHHHHHH---HhcCCCeEEEEecceeec-CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH---cC
Q 024143 157 D--------YPGDVRLAAL---SWNGEGSFLFTSSSAIYD-CSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE---FG 221 (272)
Q Consensus 157 ~--------~~~~~~~l~~---~~~gvkr~V~~SS~~vYg-~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~---~~ 221 (272)
+ .+..+.+++. ...++++|||+||+++|| .....+++|+++. |. +.|++.|.++|+++.. .+
T Consensus 220 ~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~--~~y~~~~~~~E~~~~~~~~~g 296 (516)
T 3oh8_A 220 SHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GD--DFLAEVCRDWEHATAPASDAG 296 (516)
T ss_dssp GGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CS--SHHHHHHHHHHHTTHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-Cc--ChHHHHHHHHHHHHHHHHhCC
Confidence 1 1223344442 345789999999999998 4445688999886 44 7899999999876553 34
Q ss_pred --eeEEeeCceecCCCcHHHHH---HHcCc--ccCCCCcccccccHHHHHHHHHHHh
Q 024143 222 --GCVLRLAGLYKADRGAHVYW---LQKGT--VDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 --~~IlRp~~iyG~~~~~~~~~---l~~g~--~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++|+||+++||++...+... +..|. +++++++.++|||++|+|++++.++
T Consensus 297 i~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l 353 (516)
T 3oh8_A 297 KRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAI 353 (516)
T ss_dssp CEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHH
T ss_pred CCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHH
Confidence 89999999999986533222 22332 2467889999999999999998876
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-23 Score=195.71 Aligned_cols=191 Identities=10% Similarity=0.065 Sum_probs=135.6
Q ss_pred CcCCCeEEEEcC-cHHHHHHHHHHHhcCC-CCeEEEEecCCcchhhhh---------------------hCCceeeccCc
Q 024143 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHP-GCQIYGQTMTADHHDELI---------------------NMGITPSLKWT 137 (272)
Q Consensus 81 ~~~~~~IlItGa-GfiG~~l~~~L~~~~~-g~~V~~~~R~~~~~~~l~---------------------~~~i~~~~~d~ 137 (272)
...+++|||||+ ||||++|+++|+++++ |++|++++|+++....+. ..+++.+.+|.
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 149 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK 149 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence 346789999997 9999999999999854 699999999876432111 13566665553
Q ss_pred c-------------ccCCCCEEEEecCCCCCCC-------hHHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCC
Q 024143 138 E-------------ATQKFPYVIFCAPPSRSLD-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDED 195 (272)
Q Consensus 138 ~-------------~~~~~D~Vi~~a~~~~~~~-------~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (272)
. .++++|+|||||+...... .+..+.+++. ...++++|||+||.+||+.....+++|+
T Consensus 150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~ 229 (478)
T 4dqv_A 150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTED 229 (478)
T ss_dssp TSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSS
T ss_pred CCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCc
Confidence 1 3458999999999754322 1233444442 3457899999999999987666788898
Q ss_pred CCCCCCCC---------ChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCC-----c--HHHHH-----HHcCccc
Q 024143 196 SPVVPIGR---------SPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADR-----G--AHVYW-----LQKGTVD 248 (272)
Q Consensus 196 ~p~~p~~~---------~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~-----~--~~~~~-----l~~g~~~ 248 (272)
++..|... +.|+.+|+.+|++++++ + ++|+||++|||++. . .+..+ +..|...
T Consensus 230 ~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P 309 (478)
T 4dqv_A 230 ADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAP 309 (478)
T ss_dssp SCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEE
T ss_pred ccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCccc
Confidence 87554311 34999999999999875 4 79999999999853 1 11111 2234321
Q ss_pred ----C---C---CCcccccccHHHHHHHHHHHh
Q 024143 249 ----S---R---PDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 249 ----~---~---~~~~~~~I~v~Dva~ai~~a~ 271 (272)
. + ++..+++||++|+|++++.++
T Consensus 310 ~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~ 342 (478)
T 4dqv_A 310 RSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLG 342 (478)
T ss_dssp SCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHH
T ss_pred ccccccccccccccceeeeeeHHHHHHHHHHHH
Confidence 1 1 267899999999999998765
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.1e-23 Score=184.92 Aligned_cols=183 Identities=15% Similarity=0.050 Sum_probs=131.2
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch-hhhhh-CCceeeccCc-------cccCC--CCEEEEe
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELIN-MGITPSLKWT-------EATQK--FPYVIFC 149 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~-~~l~~-~~i~~~~~d~-------~~~~~--~D~Vi~~ 149 (272)
..||+|||||+ ||||++|+++|+++ |++|++++|.+... ..+.. .+++.+.+|. +++++ +|+|||+
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~ 96 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLER--GDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHT 96 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEEC
Confidence 56789999996 99999999999999 99999999975432 22211 2455555553 13455 9999999
Q ss_pred cCCCCCC---Ch-----HHHHHHHHH--HhcCCCeEEEEecceeec----CCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024143 150 APPSRSL---DY-----PGDVRLAAL--SWNGEGSFLFTSSSAIYD----CSDNGACDEDSPVVPIGRSPRTDVLLKAEK 215 (272)
Q Consensus 150 a~~~~~~---~~-----~~~~~~l~~--~~~gvkr~V~~SS~~vYg----~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~ 215 (272)
|+..... +. .....+++. ...++++|||+||.++|+ .... +++|++ .|. .+.|+.+|+++|+
T Consensus 97 A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~-~~~Y~~sK~~~E~ 172 (333)
T 2q1w_A 97 AASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPA-NSSYAISKSANED 172 (333)
T ss_dssp CCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCT-TCHHHHHHHHHHH
T ss_pred ceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCC-CCchHHHHHHHHH
Confidence 9975431 11 122233331 345789999999999998 5433 788886 332 1689999999999
Q ss_pred HHHH-cC-eeEEeeCceecCCCc--H---HHHHHHcCcc-cCCCCcccccccHHHHHHHHHHHh
Q 024143 216 VILE-FG-GCVLRLAGLYKADRG--A---HVYWLQKGTV-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 216 ~l~~-~~-~~IlRp~~iyG~~~~--~---~~~~l~~g~~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++. +. ++++||+++|||+.. . +...+.++.. .+ ++..++++|++|+|++++.++
T Consensus 173 ~~~~s~~~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~ai~~~~ 235 (333)
T 2q1w_A 173 YLEYSGLDFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFV-TKARRDFVFVKDLARATVRAV 235 (333)
T ss_dssp HHHHHTCCEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEE-EECEECEEEHHHHHHHHHHHH
T ss_pred HHHhhhCCeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeC-CCceEeeEEHHHHHHHHHHHH
Confidence 9998 74 899999999999842 1 2223344432 34 677899999999999998876
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.6e-23 Score=182.71 Aligned_cols=184 Identities=15% Similarity=0.086 Sum_probs=134.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh--hhhhC----CceeeccCc---c----ccC--CCCEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--ELINM----GITPSLKWT---E----ATQ--KFPYVI 147 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~--~l~~~----~i~~~~~d~---~----~~~--~~D~Vi 147 (272)
.|+|||||+ ||||++|+++|+++ |++|++++|++.+.. .+... +++.+.+|. + +++ ++|+||
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 80 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEK--GYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY 80 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence 368999997 99999999999999 999999999876532 22221 455555553 1 233 479999
Q ss_pred EecCCCCC----CCh-------HHHHHHHHH--HhcCC-CeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024143 148 FCAPPSRS----LDY-------PGDVRLAAL--SWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKA 213 (272)
Q Consensus 148 ~~a~~~~~----~~~-------~~~~~~l~~--~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~a 213 (272)
|+|+.... .++ .....+++. ...++ ++|||+||.++||.....+++|+++..|. +.|+.+|+.+
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~--~~Y~~sK~~~ 158 (345)
T 2z1m_A 81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPR--SPYAVAKLFG 158 (345)
T ss_dssp ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHH
T ss_pred ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCC--ChhHHHHHHH
Confidence 99997531 121 112233331 23466 89999999999998766789999887776 8999999999
Q ss_pred HHHHHHc----C--eeEEeeCceecCCCc--HH-------HHHHHcCcc----cCCCCcccccccHHHHHHHHHHHh
Q 024143 214 EKVILEF----G--GCVLRLAGLYKADRG--AH-------VYWLQKGTV----DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 214 E~~l~~~----~--~~IlRp~~iyG~~~~--~~-------~~~l~~g~~----~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|.+++.+ + ++++|+.++|||+.. .+ ...+..+.. .+.++..++++|++|+|++++.++
T Consensus 159 e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~ 235 (345)
T 2z1m_A 159 HWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMM 235 (345)
T ss_dssp HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHH
Confidence 9998765 3 588999999999743 11 112334431 356778899999999999998876
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.8e-23 Score=183.75 Aligned_cols=179 Identities=12% Similarity=0.056 Sum_probs=129.2
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccC--CCCEEEEecCCCCC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQ--KFPYVIFCAPPSRS 155 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~--~~D~Vi~~a~~~~~ 155 (272)
||||||+ ||||++|+++|+++++|++|++++|++.... +++.+.+|. ++++ ++|+|||+|+....
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 75 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA 75 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCC
Confidence 5899996 9999999999998633689999998765432 344444443 1344 89999999986431
Q ss_pred ---CCh-------HHHHHHHHH--HhcCCCeEEEEecceeecCC-CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc--
Q 024143 156 ---LDY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCS-DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-- 220 (272)
Q Consensus 156 ---~~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~-~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-- 220 (272)
.+. .....+++. ...++++|||+||.++|+.. ...+.+|+++..|. +.|+.+|+.+|++++.+
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~--~~Y~~sK~~~e~~~~~~~~ 153 (317)
T 3ajr_A 76 KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPR--TMFGVTKIAAELLGQYYYE 153 (317)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC--SHHHHHHHHHHHHHHHHHH
T ss_pred ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCC--chHHHHHHHHHHHHHHHHH
Confidence 111 122333432 34578999999999999864 23578888887776 89999999999988754
Q ss_pred --C--eeEEeeCceecCCCc-------HH----HHHHHcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 221 --G--GCVLRLAGLYKADRG-------AH----VYWLQKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 221 --~--~~IlRp~~iyG~~~~-------~~----~~~l~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+ ++++||+++||+... .. ...+..+.+ .+.++..+++||++|+|++++.++
T Consensus 154 ~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l 221 (317)
T 3ajr_A 154 KFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLY 221 (317)
T ss_dssp HHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHH
Confidence 4 799999999996421 11 112334443 356788899999999999998775
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-22 Score=171.81 Aligned_cols=170 Identities=16% Similarity=0.132 Sum_probs=128.5
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCc-eeeccCc-----cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI-TPSLKWT-----EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i-~~~~~d~-----~~~~~~D~Vi~~a~~~~ 154 (272)
+..|+|||||+ |+||++++++|+++ |++|++++|++++...+...++ +.+.+|. +++.++|+|||+|+...
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~~ 96 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSGP 96 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCCT
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhC--CCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCCC
Confidence 45689999997 99999999999999 9999999999988877766677 7777664 35779999999999765
Q ss_pred CCCh-------HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--ee
Q 024143 155 SLDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (272)
Q Consensus 155 ~~~~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~ 223 (272)
..++ .....+++ ....++++|||+||.+.+.. |.++ .+. +.|+.+|.++|+++++.+ ++
T Consensus 97 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~--~~Y~~sK~~~e~~~~~~gi~~~ 166 (236)
T 3e8x_A 97 HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNM--RHYLVAKRLADDELKRSSLDYT 166 (236)
T ss_dssp TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGG--HHHHHHHHHHHHHHHHSSSEEE
T ss_pred CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhh--hhHHHHHHHHHHHHHHCCCCEE
Confidence 4332 12233333 23457899999999554321 2222 233 689999999999999888 89
Q ss_pred EEeeCceecCCCcHHHHHHHcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 224 VLRLAGLYKADRGAHVYWLQKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 224 IlRp~~iyG~~~~~~~~~l~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++||+.+||+... +.. ...++...+++|++|+|++++.++
T Consensus 167 ~lrpg~v~~~~~~--------~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 208 (236)
T 3e8x_A 167 IVRPGPLSNEEST--------GKVTVSPHFSEITRSITRHDVAKVIAELV 208 (236)
T ss_dssp EEEECSEECSCCC--------SEEEEESSCSCCCCCEEHHHHHHHHHHHT
T ss_pred EEeCCcccCCCCC--------CeEEeccCCCcccCcEeHHHHHHHHHHHh
Confidence 9999999998642 111 233455789999999999999876
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.7e-23 Score=188.84 Aligned_cols=182 Identities=14% Similarity=0.059 Sum_probs=131.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-----hhhhhh------C-CceeeccCc---c----ccC--C
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELIN------M-GITPSLKWT---E----ATQ--K 142 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-----~~~l~~------~-~i~~~~~d~---~----~~~--~ 142 (272)
++|||||+ ||||++|+++|+++ |++|++++|++.+ ...+.. . +++.+.+|. + +++ +
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 106 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK 106 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred CeEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcC
Confidence 78999997 99999999999999 9999999998654 222210 1 455555553 1 233 4
Q ss_pred CCEEEEecCCCCCC----Ch-------HHHHHHHHH--HhcCCC-----eEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSL----DY-------PGDVRLAAL--SWNGEG-----SFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~----~~-------~~~~~~l~~--~~~gvk-----r~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
+|+|||+|+..... +. .....+++. ...+++ +|||+||.++||.... +++|+++..|. +
T Consensus 107 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~--~ 183 (381)
T 1n7h_A 107 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPR--S 183 (381)
T ss_dssp CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCC--S
T ss_pred CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCC--C
Confidence 79999999975421 11 112233331 122343 9999999999997655 89999988776 8
Q ss_pred hHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH------H---HHHHHcCc-c---cCCCCcccccccHHHHHH
Q 024143 205 PRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------H---VYWLQKGT-V---DSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~------~---~~~l~~g~-~---~~~~~~~~~~I~v~Dva~ 265 (272)
.|+.+|+.+|++++.+ + ++++|+.++|||+... + ...+.+|. . ++.++..++|+|++|+|+
T Consensus 184 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~ 263 (381)
T 1n7h_A 184 PYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 263 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHH
Confidence 9999999999998765 4 6789999999997431 1 11233453 1 367788999999999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++.++
T Consensus 264 a~~~~~ 269 (381)
T 1n7h_A 264 AMWLML 269 (381)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998876
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-22 Score=180.90 Aligned_cols=184 Identities=15% Similarity=0.062 Sum_probs=127.0
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc----hhhhh---hCCceeeccCc---c----ccC--CCCEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH----HDELI---NMGITPSLKWT---E----ATQ--KFPYVI 147 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~----~~~l~---~~~i~~~~~d~---~----~~~--~~D~Vi 147 (272)
|+|||||+ ||||++++++|+++ |++|++++|.... ...+. ...++.+.+|. + +++ ++|+||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi 78 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence 48999996 99999999999999 9999999874322 12221 12345555553 1 232 599999
Q ss_pred EecCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024143 148 FCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (272)
Q Consensus 148 ~~a~~~~~~----~-------~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE 214 (272)
|+|+..... + ......+++ +...++++|||+||.++|+.....+++|+++..|. .+.|+.+|+++|
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~-~~~Y~~sK~~~e 157 (338)
T 1udb_A 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTP-QSPYGKSKLMVE 157 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCC-SSHHHHHHHHHH
T ss_pred ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCC-CChHHHHHHHHH
Confidence 999864311 1 112223333 13457899999999999987656688998876551 279999999999
Q ss_pred HHHHHc-----C--eeEEeeCceecCCC------------cHHHH---HHH--cCcc---c------CCCCcccccccHH
Q 024143 215 KVILEF-----G--GCVLRLAGLYKADR------------GAHVY---WLQ--KGTV---D------SRPDHILNLIHYE 261 (272)
Q Consensus 215 ~~l~~~-----~--~~IlRp~~iyG~~~------------~~~~~---~l~--~g~~---~------~~~~~~~~~I~v~ 261 (272)
++++.+ + ++++||+++||+.. ..+.. .+. ++.. . .+|++.++|||++
T Consensus 158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 237 (338)
T 1udb_A 158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_dssp HHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred HHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHH
Confidence 988763 3 79999999999831 11111 111 2221 1 2467889999999
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++.++
T Consensus 238 Dva~a~~~~l 247 (338)
T 1udb_A 238 DLADGHVVAM 247 (338)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988775
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.8e-23 Score=184.17 Aligned_cols=186 Identities=12% Similarity=0.079 Sum_probs=132.4
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCC-------CeEEEEecCCcchhhhhhCCceeeccCc---c----cc-CCCCE
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPG-------CQIYGQTMTADHHDELINMGITPSLKWT---E----AT-QKFPY 145 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g-------~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~----~~-~~~D~ 145 (272)
+.+|+|||||+ ||||++|+++|+++ | ++|++++|.+.+.......+++.+.+|. + ++ .++|+
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~--g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~ 89 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKD--GSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDV 89 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHH--CEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhc--CCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCE
Confidence 34578999996 99999999999999 9 8999999986543221122344555543 1 34 48999
Q ss_pred EEEecCCCCC---CCh-------HHHHHHHHH--HhcC-----CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHH
Q 024143 146 VIFCAPPSRS---LDY-------PGDVRLAAL--SWNG-----EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (272)
Q Consensus 146 Vi~~a~~~~~---~~~-------~~~~~~l~~--~~~g-----vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (272)
|||+|+.... .++ .....+++. ...+ +++|||+||.++|+.....+++|++|..|. +.|+.
T Consensus 90 vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~--~~Y~~ 167 (342)
T 2hrz_A 90 IFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPL--TSYGT 167 (342)
T ss_dssp EEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCS--SHHHH
T ss_pred EEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCc--chHHH
Confidence 9999997531 111 122233331 1223 799999999999987545689999988776 89999
Q ss_pred HHHHHHHHHHHc----C--eeEEeeCceec-CCCc-----HH----HHHHHcCcc---cCCCCcccccccHHHHHHHHHH
Q 024143 209 VLLKAEKVILEF----G--GCVLRLAGLYK-ADRG-----AH----VYWLQKGTV---DSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 209 sk~~aE~~l~~~----~--~~IlRp~~iyG-~~~~-----~~----~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
+|+.+|++++++ + .+++|++.+|| |+.. .+ ...+.++.. ...++...+++|++|+|++++.
T Consensus 168 sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~ 247 (342)
T 2hrz_A 168 QKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIH 247 (342)
T ss_dssp HHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHH
Confidence 999999998875 2 68999999998 6541 12 122344553 2344667789999999999987
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
++
T Consensus 248 ~~ 249 (342)
T 2hrz_A 248 GA 249 (342)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-23 Score=175.63 Aligned_cols=168 Identities=10% Similarity=-0.007 Sum_probs=125.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc--------cccCCCCEEEEecCCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------EATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~--------~~~~~~D~Vi~~a~~~~~ 155 (272)
|||||||+ |+||++++++|+++ |++|++++|++++...+ .+++.+.+|. ++++++|+|||+|+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~ 76 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT--DYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGK 76 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS--SCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTS
T ss_pred CeEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCC
Confidence 48999996 99999999999999 99999999998765443 3555555442 257799999999997543
Q ss_pred CC---hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH-HHcC--eeEEee
Q 024143 156 LD---YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVI-LEFG--GCVLRL 227 (272)
Q Consensus 156 ~~---~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l-~~~~--~~IlRp 227 (272)
.. ......+++ ....++++|||+||.++|+. .+.+| ++..|. +.|+.+|+++|+++ .+.+ ++++||
T Consensus 77 ~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~---~~~~e-~~~~~~--~~Y~~sK~~~e~~~~~~~~i~~~ilrp 150 (219)
T 3dqp_A 77 SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQP---EKWIG-AGFDAL--KDYYIAKHFADLYLTKETNLDYTIIQP 150 (219)
T ss_dssp SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCG---GGCCS-HHHHHT--HHHHHHHHHHHHHHHHSCCCEEEEEEE
T ss_pred CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCC---Ccccc-cccccc--cHHHHHHHHHHHHHHhccCCcEEEEeC
Confidence 21 233344444 24568899999999887653 23445 444444 79999999999999 5555 899999
Q ss_pred CceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 228 AGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 228 ~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+||+... +.. ..++..+++++++|+|++++.++
T Consensus 151 ~~v~g~~~~--------~~~-~~~~~~~~~i~~~Dva~~i~~~l 185 (219)
T 3dqp_A 151 GALTEEEAT--------GLI-DINDEVSASNTIGDVADTIKELV 185 (219)
T ss_dssp CSEECSCCC--------SEE-EESSSCCCCEEHHHHHHHHHHHH
T ss_pred ceEecCCCC--------Ccc-ccCCCcCCcccHHHHHHHHHHHH
Confidence 999998642 111 12367789999999999999876
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=177.88 Aligned_cols=170 Identities=16% Similarity=0.105 Sum_probs=129.8
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~~ 156 (272)
|+|||||+ ||||++++++|+++++|++|++++|++.+...+...+++.+.+|. ++++++|+|||+++... .
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~-~ 79 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHY-D 79 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCS-C
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCc-C
Confidence 47999997 999999999999875589999999998777666556777766653 25779999999998642 2
Q ss_pred C--hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEeeCce
Q 024143 157 D--YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGL 230 (272)
Q Consensus 157 ~--~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlRp~~i 230 (272)
+ ......+++ ....++++|||+||.++|+. | .+|+.+|..+|+++++.+ ++++||+.+
T Consensus 80 ~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~-------------~---~~y~~~K~~~E~~~~~~~~~~~ilrp~~~ 143 (287)
T 2jl1_A 80 NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES-------------I---IPLAHVHLATEYAIRTTNIPYTFLRNALY 143 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC-------------C---STHHHHHHHHHHHHHHTTCCEEEEEECCB
T ss_pred chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC-------------C---CchHHHHHHHHHHHHHcCCCeEEEECCEe
Confidence 2 233444544 23568999999999987631 2 379999999999999877 899999998
Q ss_pred ecCC-CcHHHHHHHcCcc-cCCCCcccccccHHHHHHHHHHHh
Q 024143 231 YKAD-RGAHVYWLQKGTV-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 231 yG~~-~~~~~~~l~~g~~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+|+. ...+...+.++.+ ...++..++++|++|+|++++.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 186 (287)
T 2jl1_A 144 TDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVL 186 (287)
T ss_dssp HHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHH
T ss_pred ccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHh
Confidence 8865 3333333445554 355678899999999999998876
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-22 Score=185.94 Aligned_cols=187 Identities=14% Similarity=0.156 Sum_probs=132.2
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch---hhh---------------hhCCceeeccCc---c-
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH---DEL---------------INMGITPSLKWT---E- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~---~~l---------------~~~~i~~~~~d~---~- 138 (272)
..|++|||||+ |+||++|+++|.++ |++|++++|++... ..+ ...++..+.+|. +
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 144 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 144 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTT--EEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcC--CCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence 34679999997 99999999999988 99999999987722 111 124566666654 1
Q ss_pred --ccCCCCEEEEecCCCCCC----C----hHHHHHHHH-HHhcCCCeEEEEecceeecC-----CCCCCCCCCCCCCCC-
Q 024143 139 --ATQKFPYVIFCAPPSRSL----D----YPGDVRLAA-LSWNGEGSFLFTSSSAIYDC-----SDNGACDEDSPVVPI- 201 (272)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~~----~----~~~~~~~l~-~~~~gvkr~V~~SS~~vYg~-----~~~~~~~E~~p~~p~- 201 (272)
...++|+|||||+..... . .+..+.+++ .+..++++|||+||.++ |. ....+++|+++..+.
T Consensus 145 l~~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~ 223 (427)
T 4f6c_A 145 VVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQL 223 (427)
T ss_dssp CCCSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCC
T ss_pred CCCcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccccCCC
Confidence 356899999999975421 1 122334444 22237899999999998 43 234688898873321
Q ss_pred CCChHHHHHHHHHHHHHHc---C--eeEEeeCceecCCCcH----------HH---HHHHcCccc--CCCCcccccccHH
Q 024143 202 GRSPRTDVLLKAEKVILEF---G--GCVLRLAGLYKADRGA----------HV---YWLQKGTVD--SRPDHILNLIHYE 261 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~---~--~~IlRp~~iyG~~~~~----------~~---~~l~~g~~~--~~~~~~~~~I~v~ 261 (272)
..+.|+.+|+.+|++++++ + ++++||+++||+.... +. ..+.++..+ +.++..++|+|++
T Consensus 224 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 303 (427)
T 4f6c_A 224 LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVD 303 (427)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHH
T ss_pred CCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHH
Confidence 2389999999999999873 4 8999999999997432 11 122333332 3368899999999
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++.++
T Consensus 304 DvA~ai~~~~ 313 (427)
T 4f6c_A 304 TTARQIVALA 313 (427)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999999876
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-22 Score=175.16 Aligned_cols=167 Identities=11% Similarity=0.033 Sum_probs=128.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~ 155 (272)
|++|||||+ |+||++++++|.++ |++|++++|++.+.. ..+++.+.+|. ++++++|+|||+|+....
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~ 77 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPM--AEILRLADLSPLDPA---GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVE 77 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGG--EEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhc--CCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCc
Confidence 568999996 99999999999999 999999999876643 23556666553 256799999999998554
Q ss_pred CChHHH-------HHHHH--HHhcCCCeEEEEecceeecCC-CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc----C
Q 024143 156 LDYPGD-------VRLAA--LSWNGEGSFLFTSSSAIYDCS-DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G 221 (272)
Q Consensus 156 ~~~~~~-------~~~l~--~~~~gvkr~V~~SS~~vYg~~-~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~----~ 221 (272)
.++.+. ..+++ ....++++|||+||..+|+.. ...+++|+.+..|. +.|+.+|+..|.+++.+ +
T Consensus 78 ~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~--~~Y~~sK~~~e~~~~~~a~~~g 155 (267)
T 3rft_A 78 KPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPD--GLYGVSKCFGENLARMYFDKFG 155 (267)
T ss_dssp CCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHHHHHhC
Confidence 443221 22232 235678999999999999753 35688999988776 89999999999988643 4
Q ss_pred --eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 222 --GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 --~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+++||+.+||+. .+++...+++|++|+++++..++
T Consensus 156 ~~~~~vr~~~v~~~~--------------~~~~~~~~~~~~~d~a~~~~~~~ 193 (267)
T 3rft_A 156 QETALVRIGSCTPEP--------------NNYRMLSTWFSHDDFVSLIEAVF 193 (267)
T ss_dssp CCEEEEEECBCSSSC--------------CSTTHHHHBCCHHHHHHHHHHHH
T ss_pred CeEEEEEeecccCCC--------------CCCCceeeEEcHHHHHHHHHHHH
Confidence 7899999999863 23455677899999998887664
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.3e-23 Score=177.90 Aligned_cols=167 Identities=11% Similarity=0.018 Sum_probs=126.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~ 155 (272)
|++|||||+ |+||++|+++|+++ |++|++++|++.+.. ..+++.+.+|. ++++++|+|||+|+....
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~ 76 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTL--AHEVRLSDIVDLGAA---EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVE 76 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGT--EEEEEECCSSCCCCC---CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSC
T ss_pred CceEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCCCcccc---CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCC
Confidence 568999997 99999999999999 999999999865421 13455555553 256789999999997543
Q ss_pred CChH-------HHHHHHH--HHhcCCCeEEEEecceeecCC-CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc----C
Q 024143 156 LDYP-------GDVRLAA--LSWNGEGSFLFTSSSAIYDCS-DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G 221 (272)
Q Consensus 156 ~~~~-------~~~~~l~--~~~~gvkr~V~~SS~~vYg~~-~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~----~ 221 (272)
.++. ....+++ ....++++|||+||..+|+.. ...+++|++|..|. +.|+.+|+.+|.+++.+ +
T Consensus 77 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~--~~Y~~sK~~~e~~~~~~~~~~g 154 (267)
T 3ay3_A 77 RPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPD--SLYGLSKCFGEDLASLYYHKFD 154 (267)
T ss_dssp CCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHHHHHcC
Confidence 3321 2223333 234578999999999999864 34689999998776 89999999999998753 3
Q ss_pred --eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 222 --GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 --~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++++||+++|+... .++...+++|++|+|++++.++
T Consensus 155 i~~~~lrp~~v~~~~~--------------~~~~~~~~~~~~dva~~~~~~~ 192 (267)
T 3ay3_A 155 IETLNIRIGSCFPKPK--------------DARMMATWLSVDDFMRLMKRAF 192 (267)
T ss_dssp CCEEEEEECBCSSSCC--------------SHHHHHHBCCHHHHHHHHHHHH
T ss_pred CCEEEEeceeecCCCC--------------CCCeeeccccHHHHHHHHHHHH
Confidence 79999999994321 1234567999999999998765
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-22 Score=195.11 Aligned_cols=187 Identities=15% Similarity=0.130 Sum_probs=134.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-hCCceeeccCc---c-----ccCCCCEEEEecCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-~~~i~~~~~d~---~-----~~~~~D~Vi~~a~~ 152 (272)
.+++|||||+ ||||++|+++|+++ +|++|++++|++.+...+. ..+++.+.+|. + +++++|+|||+|+.
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~-~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~ 392 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI 392 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHS-SSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhc-CCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECcee
Confidence 5678999996 99999999999986 2699999999876654432 23556655553 1 34589999999987
Q ss_pred CCCC----Ch-------HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCC---CC--CCCChHHHHHHHHH
Q 024143 153 SRSL----DY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV---VP--IGRSPRTDVLLKAE 214 (272)
Q Consensus 153 ~~~~----~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~---~p--~~~~~y~~sk~~aE 214 (272)
.... +. .....+++. ...+ +||||+||.++|+.....+++|+++. .| ...+.|+.+|+.+|
T Consensus 393 ~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E 471 (660)
T 1z7e_A 393 ATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD 471 (660)
T ss_dssp CCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHH
T ss_pred cCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHH
Confidence 5421 11 122333331 2446 99999999999987656678898753 11 11258999999999
Q ss_pred HHHHHc----C--eeEEeeCceecCCCcH--------------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 215 KVILEF----G--GCVLRLAGLYKADRGA--------------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 215 ~~l~~~----~--~~IlRp~~iyG~~~~~--------------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++++.+ + ++++||+++||++... +...+.+|.+ .+.+++.++|+|++|+|++++.++
T Consensus 472 ~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l 551 (660)
T 1z7e_A 472 RVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII 551 (660)
T ss_dssp HHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHH
Confidence 998653 4 8999999999997521 1223445554 356788999999999999998775
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-21 Score=192.03 Aligned_cols=186 Identities=16% Similarity=0.096 Sum_probs=131.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch----hhh---hhCCceeeccCc-------cccC--CCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH----DEL---INMGITPSLKWT-------EATQ--KFP 144 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~----~~l---~~~~i~~~~~d~-------~~~~--~~D 144 (272)
..+++|||||+ ||||++|+++|+++ |++|++++|.+... ..+ ...+++.+.+|. ++++ ++|
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D 86 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKID 86 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCC
Confidence 34579999996 99999999999999 99999999975432 111 223555555553 1344 799
Q ss_pred EEEEecCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEecceeecCCC----CCCCCCCCCCCCCCCChHH
Q 024143 145 YVIFCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSD----NGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 145 ~Vi~~a~~~~~~----~-------~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~----~~~~~E~~p~~p~~~~~y~ 207 (272)
+|||+|+..... . .+....+++ +...++++|||+||.++|+... ..+++|+++..|. +.|+
T Consensus 87 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~--~~Y~ 164 (699)
T 1z45_A 87 SVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT--NPYG 164 (699)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC--SHHH
T ss_pred EEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCC--ChHH
Confidence 999999975421 1 112223333 2345789999999999998532 2578898887776 8999
Q ss_pred HHHHHHHHHHHHc------C--eeEEeeCceecCCC------------cHHH---HHHHcC--c-c--cC------CCCc
Q 024143 208 DVLLKAEKVILEF------G--GCVLRLAGLYKADR------------GAHV---YWLQKG--T-V--DS------RPDH 253 (272)
Q Consensus 208 ~sk~~aE~~l~~~------~--~~IlRp~~iyG~~~------------~~~~---~~l~~g--~-~--~~------~~~~ 253 (272)
.+|+++|++++.+ + ++|+||+++||++. ..+. ..+..+ . + ++ .+++
T Consensus 165 ~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 244 (699)
T 1z45_A 165 HTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTP 244 (699)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSC
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCe
Confidence 9999999998763 4 79999999999742 1111 122222 2 2 23 5678
Q ss_pred ccccccHHHHHHHHHHHh
Q 024143 254 ILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 254 ~~~~I~v~Dva~ai~~a~ 271 (272)
.++|||++|+|++++.++
T Consensus 245 ~~~~i~v~Dva~a~~~a~ 262 (699)
T 1z45_A 245 IRDYIHVVDLAKGHIAAL 262 (699)
T ss_dssp EECEEEHHHHHHHHHHHH
T ss_pred eEeeEEHHHHHHHHHHHH
Confidence 899999999999998875
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=176.23 Aligned_cols=186 Identities=12% Similarity=-0.010 Sum_probs=120.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh---hhhh-----CCceeeccCc-------cccCCCCEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---ELIN-----MGITPSLKWT-------EATQKFPYV 146 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~---~l~~-----~~i~~~~~d~-------~~~~~~D~V 146 (272)
.+++|||||+ ||||++|+++|+++ |++|++++|+++... .+.. .+++.+.+|. ++++++|+|
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 81 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGV 81 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence 4578999996 99999999999999 999999999876432 1111 1244454442 256789999
Q ss_pred EEecCCCCC--CC--------hHHHHHHHHH--HhcC-CCeEEEEecce-eecCC-CCCCCCCCCCCCC-------CCCC
Q 024143 147 IFCAPPSRS--LD--------YPGDVRLAAL--SWNG-EGSFLFTSSSA-IYDCS-DNGACDEDSPVVP-------IGRS 204 (272)
Q Consensus 147 i~~a~~~~~--~~--------~~~~~~~l~~--~~~g-vkr~V~~SS~~-vYg~~-~~~~~~E~~p~~p-------~~~~ 204 (272)
||+|++... .+ .+..+.+++. ...+ ++||||+||.+ +|+.. ...+++|+++..+ ...+
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 161 (337)
T 2c29_D 82 FHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAW 161 (337)
T ss_dssp EECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTH
T ss_pred EEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccc
Confidence 999986432 11 1222334432 2335 89999999987 55542 2346778764210 0124
Q ss_pred hHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH----HHHHH---HcCcc--cCCCCcccccccHHHHHHHHHH
Q 024143 205 PRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA----HVYWL---QKGTV--DSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~----~~~~l---~~g~~--~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
+|+.+|..+|++++++ + ++++||+++|||+... ..... ..|.. ...+ ....|||++|+|++++.
T Consensus 162 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~i~v~Dva~a~~~ 240 (337)
T 2c29_D 162 MYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSII-RQGQFVHLDDLCNAHIY 240 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHH-TEEEEEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcccccc-CCCCEEEHHHHHHHHHH
Confidence 7999999999987653 4 7999999999997431 11111 22321 1111 22449999999999987
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
++
T Consensus 241 ~~ 242 (337)
T 2c29_D 241 LF 242 (337)
T ss_dssp HH
T ss_pred Hh
Confidence 75
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-22 Score=180.47 Aligned_cols=186 Identities=16% Similarity=0.062 Sum_probs=121.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh------hhh-hCCceeeccCc-------cccCCCCEEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD------ELI-NMGITPSLKWT-------EATQKFPYVIF 148 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~------~l~-~~~i~~~~~d~-------~~~~~~D~Vi~ 148 (272)
+++|||||+ ||||++|+++|+++ |++|++++|++++.. .+. ..+++.+.+|. ++++++|+|||
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 86 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQK--GYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFH 86 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHT--TCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEE
Confidence 578999996 99999999999999 999999999765422 121 12455555543 25678999999
Q ss_pred ecCCCCCC--C--------hHHHHHHHHH--HhcC-CCeEEEEecce-eecCC-C--CCCCCCCCCCC-----CC--CCC
Q 024143 149 CAPPSRSL--D--------YPGDVRLAAL--SWNG-EGSFLFTSSSA-IYDCS-D--NGACDEDSPVV-----PI--GRS 204 (272)
Q Consensus 149 ~a~~~~~~--~--------~~~~~~~l~~--~~~g-vkr~V~~SS~~-vYg~~-~--~~~~~E~~p~~-----p~--~~~ 204 (272)
+|++.... + .+..+.+++. ...+ ++||||+||.+ +|+.. . ..+++|+++.. |. ...
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 166 (338)
T 2rh8_A 87 VATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTW 166 (338)
T ss_dssp ESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCC
T ss_pred eCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccc
Confidence 99864211 1 1223344442 2344 89999999987 45421 1 13788886422 11 012
Q ss_pred hHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH----HHHH---HHcCcc--cCC------CCcccccccHHHH
Q 024143 205 PRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA----HVYW---LQKGTV--DSR------PDHILNLIHYEVN 263 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~----~~~~---l~~g~~--~~~------~~~~~~~I~v~Dv 263 (272)
+|+.+|..+|++++++ + ++++||+++|||+... .... +..|.. .+. ++..++|||++|+
T Consensus 167 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dv 246 (338)
T 2rh8_A 167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDV 246 (338)
T ss_dssp CCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHH
Confidence 5999999999988653 4 7999999999997431 1111 123322 111 1123489999999
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
|++++.++
T Consensus 247 a~a~~~~~ 254 (338)
T 2rh8_A 247 CRAHIFVA 254 (338)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998775
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9.2e-22 Score=172.19 Aligned_cols=169 Identities=18% Similarity=0.109 Sum_probs=122.6
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCCCC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSLD 157 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~~~ 157 (272)
+|||||+ |+||++++++|+++++|++|++++|++++...+...+++.+.+|. ++++++|+|||+++.... .
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~-~ 79 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVG-Q 79 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCch-H
Confidence 5899997 999999999999865589999999998776666556777766653 257899999999986321 1
Q ss_pred hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEeeCceecC
Q 024143 158 YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLYKA 233 (272)
Q Consensus 158 ~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlRp~~iyG~ 233 (272)
......+++ ....++++|||+||.++|. .| .+|+.+|.++|+++++.+ ++++||+.++++
T Consensus 80 ~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~---~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~~~ 143 (286)
T 2zcu_A 80 RAPQHRNVINAAKAAGVKFIAYTSLLHADT-------------SP---LGLADEHIETEKMLADSGIVYTLLRNGWYSEN 143 (286)
T ss_dssp --CHHHHHHHHHHHHTCCEEEEEEETTTTT-------------CC---STTHHHHHHHHHHHHHHCSEEEEEEECCBHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------Cc---chhHHHHHHHHHHHHHcCCCeEEEeChHHhhh
Confidence 222344444 2345899999999988761 12 378999999999999877 899999876664
Q ss_pred CCcHHHHHHHcCcc-cCCCCcccccccHHHHHHHHHHHh
Q 024143 234 DRGAHVYWLQKGTV-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 234 ~~~~~~~~l~~g~~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
....+...+..+.+ .+.++..++++|++|+|++++.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 182 (286)
T 2zcu_A 144 YLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVI 182 (286)
T ss_dssp HHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHH
T ss_pred hHHHhHHhhcCCceeccCCCCccccccHHHHHHHHHHHh
Confidence 32222223344543 355678899999999999998775
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.5e-21 Score=168.76 Aligned_cols=183 Identities=16% Similarity=0.096 Sum_probs=118.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec-CCcc---hhhhhhC-----CceeeccCc-------cccCCCCEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADH---HDELINM-----GITPSLKWT-------EATQKFPYVI 147 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R-~~~~---~~~l~~~-----~i~~~~~d~-------~~~~~~D~Vi 147 (272)
++|||||+ ||||++|+++|+++ |++|++++| +++. ...+... .++.+.+|. ++++++|+||
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 79 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLEN--GYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF 79 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHC--CCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence 68999996 99999999999999 999999998 6532 2222111 234444442 2467899999
Q ss_pred EecCCCCC--C---C-h----HHHHHHHHH--Hhc-CCCeEEEEeccee-ecCC-CCCCCCCCCCC--------CCCCCC
Q 024143 148 FCAPPSRS--L---D-Y----PGDVRLAAL--SWN-GEGSFLFTSSSAI-YDCS-DNGACDEDSPV--------VPIGRS 204 (272)
Q Consensus 148 ~~a~~~~~--~---~-~----~~~~~~l~~--~~~-gvkr~V~~SS~~v-Yg~~-~~~~~~E~~p~--------~p~~~~ 204 (272)
|+|++... . + + +....+++. ... ++++|||+||.++ |+.. ...+++|+++. .|. +
T Consensus 80 h~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~--~ 157 (322)
T 2p4h_X 80 HTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPF--G 157 (322)
T ss_dssp ECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT--T
T ss_pred EcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcc--c
Confidence 99975321 1 1 1 222334432 233 6899999999875 4432 23467787642 122 2
Q ss_pred -hHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH----HHHH---HHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 205 -PRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA----HVYW---LQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 205 -~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~----~~~~---l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
.|+.+|+.+|++++++ + ++++||+++|||.... .... +..|....-+....+|+|++|+|++++.+
T Consensus 158 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~ 237 (322)
T 2p4h_X 158 WNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYL 237 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHH
Confidence 6999999999988753 3 7999999999997431 1111 12343211122334899999999999876
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 238 ~ 238 (322)
T 2p4h_X 238 L 238 (322)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-21 Score=176.74 Aligned_cols=156 Identities=17% Similarity=0.187 Sum_probs=117.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCCCCC-----
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLD----- 157 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~~~~----- 157 (272)
|||||||+ ||||++|+++|+++ |+ +|++++|+.+ .+.+. ++++++|+|||+|+.....+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~--g~~~v~~~d~~~d-~~~l~-----------~~~~~~d~Vih~a~~~~~~~~~~~~ 66 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTST--TDHHIFEVHRQTK-EEELE-----------SALLKADFIVHLAGVNRPEHDKEFS 66 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CCCEEEECCTTCC-HHHHH-----------HHHHHCSEEEECCCSBCTTCSTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEECCCCC-HHHHH-----------HHhccCCEEEECCcCCCCCCHHHHH
Confidence 58999996 99999999999999 99 9999998511 11111 23457999999998643221
Q ss_pred --hHHHHHHHHH--HhcCCC-eEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH----cC--eeEEe
Q 024143 158 --YPGDVRLAAL--SWNGEG-SFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE----FG--GCVLR 226 (272)
Q Consensus 158 --~~~~~~~l~~--~~~gvk-r~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~----~~--~~IlR 226 (272)
......+++. ...+++ +|||+||.++|+ . ++|+.+|+.+|+++++ .+ ++|+|
T Consensus 67 ~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------------~--~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R 129 (369)
T 3st7_A 67 LGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------D--NPYGESKLQGEQLLREYAEEYGNTVYIYR 129 (369)
T ss_dssp SSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------------C--SHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------------C--CCchHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 2233445542 345676 999999999986 1 6899999999999987 34 89999
Q ss_pred eCceecCCCcH--------HHHHHHcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 227 LAGLYKADRGA--------HVYWLQKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 227 p~~iyG~~~~~--------~~~~l~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+++||++..+ +...+.++.+ +.+++..+++||++|+|++++.++
T Consensus 130 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 184 (369)
T 3st7_A 130 WPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAI 184 (369)
T ss_dssp ECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHH
T ss_pred CCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHH
Confidence 99999996532 2223455654 356888999999999999998876
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.6e-20 Score=154.95 Aligned_cols=170 Identities=14% Similarity=0.042 Sum_probs=119.3
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~~ 156 (272)
|+|+|||+ |+||++++++|+++ |++|++++|++++...+...+++.+.+|. ++++++|+|||+++.....
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~ 81 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL 81 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCC
Confidence 68999997 99999999999999 99999999987765433234566666653 2567899999999865421
Q ss_pred C----hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEeeC
Q 024143 157 D----YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLA 228 (272)
Q Consensus 157 ~----~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlRp~ 228 (272)
+ ......+++ ....++++|||+||.++|+..... +. +. +.|+.+|..+|+++++.+ ++++||+
T Consensus 82 ~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~------~~-~~--~~y~~~K~~~e~~~~~~~i~~~~lrp~ 152 (206)
T 1hdo_A 82 SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------PP-RL--QAVTDDHIRMHKVLRESGLKYVAVMPP 152 (206)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------CG-GG--HHHHHHHHHHHHHHHHTCSEEEEECCS
T ss_pred CccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccc------cc-cc--hhHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 1 223334443 234578999999999998754211 11 22 689999999999999887 8999999
Q ss_pred ceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 229 GLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 229 ~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.++ ++.... .+.. .....+. .+++|++|+|++++.++
T Consensus 153 ~~~-~~~~~~--~~~~-~~~~~~~--~~~i~~~Dva~~~~~~~ 189 (206)
T 1hdo_A 153 HIG-DQPLTG--AYTV-TLDGRGP--SRVISKHDLGHFMLRCL 189 (206)
T ss_dssp EEE-CCCCCS--CCEE-ESSSCSS--CSEEEHHHHHHHHHHTT
T ss_pred ccc-CCCCCc--ceEe-cccCCCC--CCccCHHHHHHHHHHHh
Confidence 973 332100 0000 0001111 58999999999998876
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.1e-21 Score=172.04 Aligned_cols=179 Identities=16% Similarity=0.085 Sum_probs=124.7
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCC-----CeEEEEecCCcchhhhhhCCceeeccCc-------cccCC---CCEEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPG-----CQIYGQTMTADHHDELINMGITPSLKWT-------EATQK---FPYVIF 148 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g-----~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~---~D~Vi~ 148 (272)
|+|||||+ ||||++|+++|+++ | ++|++++|++.... +...+++.+.+|. +++++ +|+|||
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~--g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih 78 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLA--DTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFY 78 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTST--TCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhC--CCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEE
Confidence 58999996 99999999999999 9 99999999866543 2223566665553 24556 999999
Q ss_pred ecCCCCCCC------hHHHHHHHHH--Hhc--CCCeEE-------EEecceeecCC--CCCCCCCCCCCCCCCCChHHHH
Q 024143 149 CAPPSRSLD------YPGDVRLAAL--SWN--GEGSFL-------FTSSSAIYDCS--DNGACDEDSPVVPIGRSPRTDV 209 (272)
Q Consensus 149 ~a~~~~~~~------~~~~~~~l~~--~~~--gvkr~V-------~~SS~~vYg~~--~~~~~~E~~p~~p~~~~~y~~s 209 (272)
||+...... ......+++. ... ++++|| |+||.++||.. ...+++|++|..|. .+.|
T Consensus 79 ~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~-~~~y--- 154 (364)
T 2v6g_A 79 VTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKY-MNFY--- 154 (364)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSS-CCHH---
T ss_pred CCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCcc-chhh---
Confidence 999754221 1223344442 233 689998 89999999874 24688999887652 2577
Q ss_pred HHHHHHHHHHc----C---eeEEeeCceecCCCcH---------HHHHH--HcCcc---cCCC---CcccccccHHHHHH
Q 024143 210 LLKAEKVILEF----G---GCVLRLAGLYKADRGA---------HVYWL--QKGTV---DSRP---DHILNLIHYEVNTL 265 (272)
Q Consensus 210 k~~aE~~l~~~----~---~~IlRp~~iyG~~~~~---------~~~~l--~~g~~---~~~~---~~~~~~I~v~Dva~ 265 (272)
..+|++++++ + ++|+||+++|||+... +...+ .+|.+ .+++ ....+++|++|+|+
T Consensus 155 -~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~ 233 (364)
T 2v6g_A 155 -YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAE 233 (364)
T ss_dssp -HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHH
T ss_pred -HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHH
Confidence 3477777653 2 7999999999987531 12223 34554 2444 34578888999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++.++
T Consensus 234 a~~~~~ 239 (364)
T 2v6g_A 234 HHIWAA 239 (364)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998875
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7e-21 Score=171.78 Aligned_cols=172 Identities=12% Similarity=0.026 Sum_probs=126.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc----chh---hhhhCCceeeccCc-------cccC--CCCEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD----HHD---ELINMGITPSLKWT-------EATQ--KFPYV 146 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~----~~~---~l~~~~i~~~~~d~-------~~~~--~~D~V 146 (272)
+++|||||+ |+||++|+++|+++ |++|++++|++. +.. .+...+++.+.+|. ++++ ++|+|
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDA--HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV 87 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHT--TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC--CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence 578999997 99999999999999 999999999862 222 23345777777764 2466 99999
Q ss_pred EEecCCCCCCChHHHHHHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--
Q 024143 147 IFCAPPSRSLDYPGDVRLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-- 221 (272)
Q Consensus 147 i~~a~~~~~~~~~~~~~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~-- 221 (272)
||+++.... ....+++ ....+ +++||+ | +||. +.+|+++..|. +.|+.+|+.+|+++++.+
T Consensus 88 i~~a~~~n~----~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~--~~y~~sK~~~e~~l~~~g~~ 153 (346)
T 3i6i_A 88 VSTVGGESI----LDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPG--LNMYREKRRVRQLVEESGIP 153 (346)
T ss_dssp EECCCGGGG----GGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTH--HHHHHHHHHHHHHHHHTTCC
T ss_pred EECCchhhH----HHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCc--chHHHHHHHHHHHHHHcCCC
Confidence 999997432 2234443 23457 999996 3 4553 35667666665 789999999999999987
Q ss_pred eeEEeeCceecCCCcHHHHHH----HcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 222 GCVLRLAGLYKADRGAHVYWL----QKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 ~~IlRp~~iyG~~~~~~~~~l----~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++++||+.+||.....+.... ..+.. +++++..++|||++|+|++++.++
T Consensus 154 ~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l 209 (346)
T 3i6i_A 154 FTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTV 209 (346)
T ss_dssp BEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHT
T ss_pred EEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHH
Confidence 899999999997533221111 22222 477888999999999999999876
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-20 Score=164.43 Aligned_cols=171 Identities=12% Similarity=0.030 Sum_probs=124.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~~ 156 (272)
|+|||||+ |+||++++++|.++ +|++|++++|++++...+...+++.+.+|. ++++++|+|||+++.....
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~-~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~ 79 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN-HIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPS 79 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-TCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSH
T ss_pred CEEEEEcCCchHHHHHHHHHhhC-CCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccc
Confidence 47999996 99999999998875 379999999998877766667788777764 2578999999999875432
Q ss_pred C-hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEeeCcee
Q 024143 157 D-YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLY 231 (272)
Q Consensus 157 ~-~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlRp~~iy 231 (272)
. .....++++ +...+++||||+||.+ .. +..|. .+...+..+|+.+.+.+ ++++||+++|
T Consensus 80 ~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~---~~------~~~~~------~~~~~~~~~e~~~~~~g~~~~ilrp~~~~ 144 (289)
T 3e48_A 80 FKRIPEVENLVYAAKQSGVAHIIFIGYYA---DQ------HNNPF------HMSPYFGYASRLLSTSGIDYTYVRMAMYM 144 (289)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEESC---CS------TTCCS------TTHHHHHHHHHHHHHHCCEEEEEEECEES
T ss_pred hhhHHHHHHHHHHHHHcCCCEEEEEcccC---CC------CCCCC------ccchhHHHHHHHHHHcCCCEEEEeccccc
Confidence 1 233445554 2456899999999943 21 11121 22334557888888887 8999999999
Q ss_pred cCCCcHHHHHHHcCcc-cCCCCcccccccHHHHHHHHHHHh
Q 024143 232 KADRGAHVYWLQKGTV-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 232 G~~~~~~~~~l~~g~~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+....+...+..+.. .+.++..+++||++|+|++++.++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 185 (289)
T 3e48_A 145 DPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAII 185 (289)
T ss_dssp TTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHH
Confidence 9753333223344443 456788999999999999998875
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-20 Score=168.34 Aligned_cols=173 Identities=12% Similarity=0.034 Sum_probs=126.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhh----CCceeeccCc-------cccCCCCEEEE
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN----MGITPSLKWT-------EATQKFPYVIF 148 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~----~~i~~~~~d~-------~~~~~~D~Vi~ 148 (272)
+.+++|||||+ |+||++++++|+++ +|+ +|++++|++.+...+.. .++..+.+|. ++++++|+|||
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~-~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih 97 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDT-TNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH 97 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHH-CCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhh-CCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 34579999996 99999999999987 266 99999998766544322 3566666663 25779999999
Q ss_pred ecCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024143 149 CAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEK 215 (272)
Q Consensus 149 ~a~~~~~~----~-------~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~ 215 (272)
+|+..... + ......+++ ....++++||++||..+| .|. +.|+.+|+.+|+
T Consensus 98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~--------------~p~--~~Y~~sK~~~E~ 161 (344)
T 2gn4_A 98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA--------------NPI--NLYGATKLCSDK 161 (344)
T ss_dssp CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS--------------SCC--SHHHHHHHHHHH
T ss_pred CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC--------------CCc--cHHHHHHHHHHH
Confidence 99975421 1 111223333 234689999999997643 133 789999999999
Q ss_pred HHHHc-------C--eeEEeeCceecCCCcH---HHHHHHcCc-c--cCCCCcccccccHHHHHHHHHHHh
Q 024143 216 VILEF-------G--GCVLRLAGLYKADRGA---HVYWLQKGT-V--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 216 ~l~~~-------~--~~IlRp~~iyG~~~~~---~~~~l~~g~-~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++.+ + ++++||+++||+.... +...+..|+ + +.+++..++|+|++|+|++++.++
T Consensus 162 ~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l 232 (344)
T 2gn4_A 162 LFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSL 232 (344)
T ss_dssp HHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHH
Confidence 98863 2 7999999999997643 223345565 3 356788899999999999998875
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=162.61 Aligned_cols=174 Identities=16% Similarity=0.103 Sum_probs=122.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCcc----ccC--CCCEEEEecCCCCCC-
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----ATQ--KFPYVIFCAPPSRSL- 156 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~----~~~--~~D~Vi~~a~~~~~~- 156 (272)
|+|||||+ |+||++++++|+ + |++|++++|++... .++.....|.+ +++ ++|+|||+|+.....
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~~~~-----~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 72 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-E--RHEVIKVYNSSEIQ-----GGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDK 72 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-T--TSCEEEEESSSCCT-----TCEECCTTSHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred CEEEEECCCChhHHHHHHHHh-c--CCeEEEecCCCcCC-----CCceeccCCHHHHHHHHHhcCCCEEEECCcccChhh
Confidence 47999996 999999999998 7 89999999986431 12222222322 334 499999999975421
Q ss_pred ---Ch-------HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcCeeE
Q 024143 157 ---DY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCV 224 (272)
Q Consensus 157 ---~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~~~I 224 (272)
++ .....+++. ...++ +|||+||..+|+... .+++|+++..|. +.|+.+|+++|++++...+++
T Consensus 73 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~-~~~~e~~~~~~~--~~Y~~sK~~~e~~~~~~~~~~ 148 (273)
T 2ggs_A 73 CEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEK-GNYKEEDIPNPI--NYYGLSKLLGETFALQDDSLI 148 (273)
T ss_dssp HHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSS-CSBCTTSCCCCS--SHHHHHHHHHHHHHCCTTCEE
T ss_pred hhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCC-CCcCCCCCCCCC--CHHHHHHHHHHHHHhCCCeEE
Confidence 11 112233331 23455 999999999998653 488999987776 799999999999998745899
Q ss_pred EeeCceecCCCcH--HHHHHHcCccc-CCCCcccccccHHHHHHHHHHHh
Q 024143 225 LRLAGLYKADRGA--HVYWLQKGTVD-SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 225 lRp~~iyG~~~~~--~~~~l~~g~~~-~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+||+.+||+.... +...+.++... ..++ .++++|++|+|++++.++
T Consensus 149 iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~ 197 (273)
T 2ggs_A 149 IRTSGIFRNKGFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELL 197 (273)
T ss_dssp EEECCCBSSSSHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHH
T ss_pred EeccccccccHHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHH
Confidence 9999999843211 11223455432 2233 789999999999998775
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=9.5e-21 Score=158.97 Aligned_cols=166 Identities=11% Similarity=0.001 Sum_probs=116.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCC--eEEEEecCCcchhhhhhCCceeeccCc---cccCC--CCEEEEecCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPSLKWT---EATQK--FPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~l~~~~i~~~~~d~---~~~~~--~D~Vi~~a~~~~~ 155 (272)
+|+|+|||+ |+||++++++|+++ |+ +|++++|++.+. ..+++.+.+|. +.+.. +|+|||+++....
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~--g~~~~V~~~~r~~~~~----~~~~~~~~~D~~~~~~~~~~~~d~vi~~a~~~~~ 78 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSE--PTLAKVIAPARKALAE----HPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIK 78 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHC--TTCCEEECCBSSCCCC----CTTEECCBSCHHHHGGGCCSCCSEEEECCCCCHH
T ss_pred CceEEEECCCcHHHHHHHHHHHhC--CCCCeEEEEeCCCccc----CCCceEEeccccCHHHHHHhhhcEEEECeeeccc
Confidence 468999996 99999999999999 98 999999987651 23455555553 11111 8999999997531
Q ss_pred --CCh-------HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC---
Q 024143 156 --LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--- 221 (272)
Q Consensus 156 --~~~-------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--- 221 (272)
.+. .....+++ ....++++|||+||.++|+. |. +.|+.+|.++|+++++++
T Consensus 79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------------~~--~~y~~sK~~~e~~~~~~~~~~ 143 (215)
T 2a35_A 79 EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SS--IFYNRVKGELEQALQEQGWPQ 143 (215)
T ss_dssp HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CS--SHHHHHHHHHHHHHTTSCCSE
T ss_pred cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------------Cc--cHHHHHHHHHHHHHHHcCCCe
Confidence 111 12223333 23457899999999998852 22 689999999999999875
Q ss_pred eeEEeeCceecCCCcH-HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 222 GCVLRLAGLYKADRGA-HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 ~~IlRp~~iyG~~~~~-~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++++||+.+||++... +...+. +.....++..++++|++|+|++++.++
T Consensus 144 ~~~vrp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~ 193 (215)
T 2a35_A 144 LTIARPSLLFGPREEFRLAEILA-APIARILPGKYHGIEACDLARALWRLA 193 (215)
T ss_dssp EEEEECCSEESTTSCEEGGGGTT-CCCC----CHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCceeeCCCCcchHHHHHH-HhhhhccCCCcCcEeHHHHHHHHHHHH
Confidence 7999999999997541 111222 111111223678999999999999876
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.84 E-value=6.6e-21 Score=168.33 Aligned_cols=175 Identities=14% Similarity=0.043 Sum_probs=126.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCC-CeEEEEecCCcch--hhhhhCCceeeccCc-------cccCCCCEEEEecCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHH--DELINMGITPSLKWT-------EATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~--~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~ 152 (272)
+++|+|||+ |+||++++++|+++ | ++|++++|++++. ..+...+++.+.+|. ++++++|+|||+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 82 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED--GTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNY 82 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--CSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc--CCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCC
Confidence 478999997 99999999999999 8 9999999987664 334445777776663 257899999999975
Q ss_pred CCCCCh---HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEE
Q 024143 153 SRSLDY---PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVL 225 (272)
Q Consensus 153 ~~~~~~---~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~Il 225 (272)
...... ....++++ +...++++|||+|+.++|+... +. +. .+|+.+|..+|+++++.+ ++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~------~~---~~--~~y~~sK~~~e~~~~~~gi~~~il 151 (299)
T 2wm3_A 83 WESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTA------GR---LA--AAHFDGKGEVEEYFRDIGVPMTSV 151 (299)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTT------TS---CC--CHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCC------Cc---cc--CchhhHHHHHHHHHHHCCCCEEEE
Confidence 321111 22334444 2346899999999888886421 11 22 689999999999999887 8999
Q ss_pred eeCceecCCCcHHHH-HHHcCc---c-cCCCCcccccccHHHHHHHHHHHh
Q 024143 226 RLAGLYKADRGAHVY-WLQKGT---V-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 226 Rp~~iyG~~~~~~~~-~l~~g~---~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
||+++||+....+.. ....|+ + ...++..+++||++|+|++++.++
T Consensus 152 rp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l 202 (299)
T 2wm3_A 152 RLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLL 202 (299)
T ss_dssp ECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHH
T ss_pred eecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHH
Confidence 999999974321110 123342 1 234678899999999999998775
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=161.02 Aligned_cols=177 Identities=14% Similarity=0.096 Sum_probs=119.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~ 154 (272)
.|++|||||+ |+||++++++|+++++|++|++++|++++.+.+ ..+++.+.+|. ++++++|+|||+|+...
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~ 81 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSAVP 81 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccccc
Confidence 4689999996 999999999999984469999999987665544 23455555553 25678999999998532
Q ss_pred C------------CC--h----------HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHH
Q 024143 155 S------------LD--Y----------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (272)
Q Consensus 155 ~------------~~--~----------~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (272)
. .+ + .....+++ ....++++|||+||.++|.. ..|..+...+.|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~--------~~~~~~~~~~~y~~ 153 (253)
T 1xq6_A 82 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP--------DHPLNKLGNGNILV 153 (253)
T ss_dssp EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------TCGGGGGGGCCHHH
T ss_pred cccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------CCccccccchhHHH
Confidence 1 10 0 12233333 23457899999999887532 22222221246888
Q ss_pred HHHHHHHHHHHcC--eeEEeeCceecCCCcHHHHHHHc-CcccCCCCcccccccHHHHHHHHHHHh
Q 024143 209 VLLKAEKVILEFG--GCVLRLAGLYKADRGAHVYWLQK-GTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 209 sk~~aE~~l~~~~--~~IlRp~~iyG~~~~~~~~~l~~-g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+|+.+|+++++.+ ++++||+.+||+...... .+.. ...+. ....+++|++|+|++++.++
T Consensus 154 sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~Dva~~~~~~~ 216 (253)
T 1xq6_A 154 WKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE-LLVGKDDELL--QTDTKTVPRADVAEVCIQAL 216 (253)
T ss_dssp HHHHHHHHHHTSSSCEEEEEECEEECSCSSSSC-EEEESTTGGG--GSSCCEEEHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCceEEEecceeecCCcchhh-hhccCCcCCc--CCCCcEEcHHHHHHHHHHHH
Confidence 9999999998877 899999999998643110 0000 11111 12356999999999998876
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-19 Score=155.59 Aligned_cols=169 Identities=15% Similarity=0.076 Sum_probs=118.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCC--eEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~ 153 (272)
+++|+|||+ |+||++++++|+++ |+ +|++++|++++...+...++..+.+|. ++++++|+|||||+..
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~--G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQ--GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHH--TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcC--CCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 468999996 99999999999999 99 999999987765433333455555553 2567899999999974
Q ss_pred CCCC----h----HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--
Q 024143 154 RSLD----Y----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-- 221 (272)
Q Consensus 154 ~~~~----~----~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~-- 221 (272)
.... + .....+++ ....++++||++||.++|+. +. +.|+.+|...|++++.++
T Consensus 96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------------~~--~~Y~~sK~~~e~~~~~~~~~ 160 (242)
T 2bka_A 96 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SN--FLYLQVKGEVEAKVEELKFD 160 (242)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CS--SHHHHHHHHHHHHHHTTCCS
T ss_pred cccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------------Cc--chHHHHHHHHHHHHHhcCCC
Confidence 3211 0 11222332 23457899999999998752 12 589999999999999875
Q ss_pred -eeEEeeCceecCCCcH-HHHH----HHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 222 -GCVLRLAGLYKADRGA-HVYW----LQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 -~~IlRp~~iyG~~~~~-~~~~----l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++++||+.+||+.... .... +....+. ......+++++|+|++++.++
T Consensus 161 ~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~~~ 214 (242)
T 2bka_A 161 RYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPD--SWASGHSVPVVTVVRAMLNNV 214 (242)
T ss_dssp EEEEEECCEEECTTGGGSHHHHHHHHHHCSCCT--TGGGGTEEEHHHHHHHHHHHH
T ss_pred CeEEEcCceecCCCCCCcHHHHHHHHhhcccCc--cccCCcccCHHHHHHHHHHHH
Confidence 7899999999996432 1111 1211111 111235899999999998876
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-19 Score=155.80 Aligned_cols=172 Identities=15% Similarity=0.031 Sum_probs=114.7
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPP 152 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~ 152 (272)
.+|++|||||+ |+||++++++|+++ | ++|++++|++++...+...+++.+.+|. ++++++|+|||+++.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~--G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADK--QTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC--TTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhC--CCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence 45678999996 99999999999999 9 8999999998776655445666666664 257899999999986
Q ss_pred CCCCChHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCC--CCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEe
Q 024143 153 SRSLDYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGA--CDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLR 226 (272)
Q Consensus 153 ~~~~~~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~--~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlR 226 (272)
.. +....++++ +...++++||++||.++|+.....+ ..|..+. .+...+..+|+.+++.+ ++++|
T Consensus 99 ~~---~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~gi~~~~vr 169 (236)
T 3qvo_A 99 ED---LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIG------EPLKPFRRAADAIEASGLEYTILR 169 (236)
T ss_dssp TT---HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------C------GGGHHHHHHHHHHHTSCSEEEEEE
T ss_pred Cc---hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhccc------chHHHHHHHHHHHHHCCCCEEEEe
Confidence 43 222344444 2456899999999999998643332 2332221 22234566788888877 89999
Q ss_pred eCceecCCCcHHHHHHHcCcccCCCC-cccccccHHHHHHHHHHHh
Q 024143 227 LAGLYKADRGAHVYWLQKGTVDSRPD-HILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 227 p~~iyG~~~~~~~~~l~~g~~~~~~~-~~~~~I~v~Dva~ai~~a~ 271 (272)
|+.++++..... .....+. ....+++++|+|++++.++
T Consensus 170 Pg~i~~~~~~~~-------~~~~~~~~~~~~~i~~~DvA~~i~~ll 208 (236)
T 3qvo_A 170 PAWLTDEDIIDY-------ELTSRNEPFKGTIVSRKSVAALITDII 208 (236)
T ss_dssp ECEEECCSCCCC-------EEECTTSCCSCSEEEHHHHHHHHHHHH
T ss_pred CCcccCCCCcce-------EEeccCCCCCCcEECHHHHHHHHHHHH
Confidence 999998753211 0111111 1235899999999998775
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=164.66 Aligned_cols=170 Identities=15% Similarity=0.145 Sum_probs=122.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch--hhhhh-CCceeeccC-c-------cccCCCCEEEEecC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH--DELIN-MGITPSLKW-T-------EATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~--~~l~~-~~i~~~~~d-~-------~~~~~~D~Vi~~a~ 151 (272)
+++|+|||+ |+||++|+++|+++ |++|++++|++++. ..+.. .+++.+.+| . ++++++|+|||+++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~ 82 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT 82 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCC
Confidence 468999997 99999999999999 99999999987764 33432 256666666 4 24789999999997
Q ss_pred CCCCCChHHHHHHHH--HHhcC-CCeEEEEecce--eecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeE
Q 024143 152 PSRSLDYPGDVRLAA--LSWNG-EGSFLFTSSSA--IYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCV 224 (272)
Q Consensus 152 ~~~~~~~~~~~~~l~--~~~~g-vkr~V~~SS~~--vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~I 224 (272)
.......... ++++ ....+ +++|||+||.. .|+. . +. ++|+.+|+++|+++++.+ ++|
T Consensus 83 ~~~~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------~-~~--~~y~~sK~~~E~~~~~~gi~~~i 147 (352)
T 1xgk_A 83 SQAGDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------W-PA--VPMWAPKFTVENYVRQLGLPSTF 147 (352)
T ss_dssp STTSCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------C-CC--CTTTHHHHHHHHHHHTSSSCEEE
T ss_pred CCCcHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-----------C-CC--ccHHHHHHHHHHHHHHcCCCEEE
Confidence 6432222323 4444 23457 99999999976 3321 1 11 578899999999999887 899
Q ss_pred EeeCceecCCCcHHHH-----H-HHcCcc----cCCCCcccccccH-HHHHHHHHHHh
Q 024143 225 LRLAGLYKADRGAHVY-----W-LQKGTV----DSRPDHILNLIHY-EVNTLVLFIAS 271 (272)
Q Consensus 225 lRp~~iyG~~~~~~~~-----~-l~~g~~----~~~~~~~~~~I~v-~Dva~ai~~a~ 271 (272)
+||+ +||++...... . ..+|.+ ++.+++.+++||+ +|+|++++.++
T Consensus 148 vrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l 204 (352)
T 1xgk_A 148 VYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIF 204 (352)
T ss_dssp EEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHH
T ss_pred Eecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHH
Confidence 9986 68876431100 0 134442 3457888999999 89999998775
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.4e-20 Score=156.88 Aligned_cols=170 Identities=14% Similarity=-0.014 Sum_probs=120.0
Q ss_pred CCeEEEEcC-cHHHHHHHHHHH-hcCCCCeEEEEecCCc-chhhh--hhCCceeeccCc-------cccCCCCEEEEecC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWR-QEHPGCQIYGQTMTAD-HHDEL--INMGITPSLKWT-------EATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~-~~~~g~~V~~~~R~~~-~~~~l--~~~~i~~~~~d~-------~~~~~~D~Vi~~a~ 151 (272)
|++|+|||+ |+||++++++|+ ++ |++|++++|+++ +.+.+ ...++..+.+|. ++++++|+|||+++
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag 82 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYT--DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM 82 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHC--CCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcC--CceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence 455999996 999999999999 88 999999999987 76655 334566666653 25689999999998
Q ss_pred CCCCCChHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHcC--eeEEe
Q 024143 152 PSRSLDYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS-PRTDVLLKAEKVILEFG--GCVLR 226 (272)
Q Consensus 152 ~~~~~~~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~-~y~~sk~~aE~~l~~~~--~~IlR 226 (272)
... .+ .++++ +...++++||++||.++|+.... ...+.... .. . .|+.+|...|+++++.+ ++++|
T Consensus 83 ~~n----~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~-~~~~~~~~-~~--~~~y~~~K~~~e~~~~~~~i~~~~vr 153 (221)
T 3r6d_A 83 ESG----SD-MASIVKALSRXNIRRVIGVSMAGLSGEFPV-ALEKWTFD-NL--PISYVQGERQARNVLRESNLNYTILR 153 (221)
T ss_dssp CCH----HH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCH-HHHHHHHH-TS--CHHHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred CCC----hh-HHHHHHHHHhcCCCeEEEEeeceecCCCCc-cccccccc-cc--ccHHHHHHHHHHHHHHhCCCCEEEEe
Confidence 642 22 44444 24567899999999999875321 11111000 11 3 89999999999999988 89999
Q ss_pred eCceecCC-CcHHHHHHHcCcccCCCC-cccccccHHHHHHHHHHHh
Q 024143 227 LAGLYKAD-RGAHVYWLQKGTVDSRPD-HILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 227 p~~iyG~~-~~~~~~~l~~g~~~~~~~-~~~~~I~v~Dva~ai~~a~ 271 (272)
|+.+|++. ...+ .....+. ....+++.+|+|++++.++
T Consensus 154 pg~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~dvA~~~~~l~ 193 (221)
T 3r6d_A 154 LTWLYNDPEXTDY-------ELIPEGAQFNDAQVSREAVVKAIFDIL 193 (221)
T ss_dssp ECEEECCTTCCCC-------EEECTTSCCCCCEEEHHHHHHHHHHHH
T ss_pred chhhcCCCCCcce-------eeccCCccCCCceeeHHHHHHHHHHHH
Confidence 99999873 2110 0001111 1223899999999998876
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=6.6e-20 Score=162.49 Aligned_cols=177 Identities=12% Similarity=-0.023 Sum_probs=120.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-----chhh---hhhCCceeeccCc-------cccCCCCEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-----HHDE---LINMGITPSLKWT-------EATQKFPYVI 147 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-----~~~~---l~~~~i~~~~~d~-------~~~~~~D~Vi 147 (272)
|++|+|||+ |+||++++++|+++ |++|++++|++. +... +...+++.+.+|. ++++++|+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence 578999996 99999999999999 999999999853 2222 2345777776664 2578999999
Q ss_pred EecCCCCCCChHHHHHHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--e
Q 024143 148 FCAPPSRSLDYPGDVRLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--G 222 (272)
Q Consensus 148 ~~a~~~~~~~~~~~~~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~ 222 (272)
|+++............+++ ....| ++|||+ | +||.....+ +.+..|. .+.| .+|..+|+++++.+ +
T Consensus 82 ~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~-~~~y-~sK~~~e~~~~~~g~~~ 152 (313)
T 1qyd_A 82 SALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPG-SITF-IDKRKVRRAIEAASIPY 152 (313)
T ss_dssp ECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSST-THHH-HHHHHHHHHHHHTTCCB
T ss_pred ECCccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCC-cchH-HHHHHHHHHHHhcCCCe
Confidence 9998753221122234443 23567 999996 3 566432221 2233332 2467 99999999999887 8
Q ss_pred eEEeeCceecCCCcHHHHH-----HHcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 223 CVLRLAGLYKADRGAHVYW-----LQKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 223 ~IlRp~~iyG~~~~~~~~~-----l~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++||+.++|+....+... ...+.. .+.++..++++|++|+|++++.++
T Consensus 153 ~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l 208 (313)
T 1qyd_A 153 TYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI 208 (313)
T ss_dssp CEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHT
T ss_pred EEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHH
Confidence 9999999887432111100 111222 356788899999999999998876
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.79 E-value=7.1e-19 Score=155.43 Aligned_cols=172 Identities=17% Similarity=0.112 Sum_probs=119.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-------cchhh---hhhCCceeeccCc-------cccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-------DHHDE---LINMGITPSLKWT-------EATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-------~~~~~---l~~~~i~~~~~d~-------~~~~~~D~ 145 (272)
|++|+|||+ |+||++|+++|+++ |++|++++|++ ++... +...+++.+.+|. ++++++|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~ 79 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA--GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDI 79 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH--TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred CcEEEEECCCchHHHHHHHHHHhC--CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCE
Confidence 678999997 99999999999999 99999999986 33222 2335777776663 25789999
Q ss_pred EEEecCCCCCCChHHHHHHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC-
Q 024143 146 VIFCAPPSRSLDYPGDVRLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (272)
Q Consensus 146 Vi~~a~~~~~~~~~~~~~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~- 221 (272)
|||+++.... ....+++ ....| ++|||+ | +||.. .+|..+..|. .+.| .+|..+|+++++.+
T Consensus 80 vi~~a~~~~~----~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~-~~~y-~sK~~~e~~~~~~~i 145 (307)
T 2gas_A 80 VICAAGRLLI----EDQVKIIKAIKEAGNVKKFFP-S---EFGLD----VDRHDAVEPV-RQVF-EEKASIRRVIEAEGV 145 (307)
T ss_dssp EEECSSSSCG----GGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTSCCCCTTH-HHHH-HHHHHHHHHHHHHTC
T ss_pred EEECCccccc----ccHHHHHHHHHhcCCceEEee-c---ccccC----cccccCCCcc-hhHH-HHHHHHHHHHHHcCC
Confidence 9999987541 1223333 23456 999984 3 46532 2333333331 1478 89999999999877
Q ss_pred -eeEEeeCceecCCCcHHHHH---H-HcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 222 -GCVLRLAGLYKADRGAHVYW---L-QKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 -~~IlRp~~iyG~~~~~~~~~---l-~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++++||+.++++....+... . ..+.. .+.++..++++|++|+|++++.++
T Consensus 146 ~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l 202 (307)
T 2gas_A 146 PYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAA 202 (307)
T ss_dssp CBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHH
T ss_pred CeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHH
Confidence 89999999887643221110 1 11222 356778899999999999998876
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-18 Score=154.23 Aligned_cols=172 Identities=15% Similarity=0.038 Sum_probs=118.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-chhh---hhhCCceeeccCc-------cccCCCCEEEEecC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDE---LINMGITPSLKWT-------EATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-~~~~---l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~ 151 (272)
|++|+|||+ |+||++++++|+++ |++|++++|++. +... +...+++.+.+|. ++++++|+|||+++
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCeEEEECCCchHHHHHHHHHHHC--CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 458999997 99999999999999 999999999875 3322 2345777777664 25789999999998
Q ss_pred CCCCCChHHHHHHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEe
Q 024143 152 PSRSLDYPGDVRLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLR 226 (272)
Q Consensus 152 ~~~~~~~~~~~~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlR 226 (272)
..... ..++++ ....+ +++||+ | +||.. .+|..+..|. .+.| .+|..+|+++++.+ ++++|
T Consensus 89 ~~~~~----~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~-~~~y-~sK~~~e~~~~~~~~~~~~lr 154 (318)
T 2r6j_A 89 FPQIL----DQFKILEAIKVAGNIKRFLP-S---DFGVE----EDRINALPPF-EALI-ERKRMIRRAIEEANIPYTYVS 154 (318)
T ss_dssp GGGST----THHHHHHHHHHHCCCCEEEC-S---CCSSC----TTTCCCCHHH-HHHH-HHHHHHHHHHHHTTCCBEEEE
T ss_pred hhhhH----HHHHHHHHHHhcCCCCEEEe-e---ccccC----cccccCCCCc-chhH-HHHHHHHHHHHhcCCCeEEEE
Confidence 64321 123333 13456 999985 3 46532 2333333331 1367 89999999999987 89999
Q ss_pred eCceecCCCcHHHHH-HHcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 227 LAGLYKADRGAHVYW-LQKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 227 p~~iyG~~~~~~~~~-l~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+.+++.....+... +..+.. .+.++..++++|++|+|++++.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l 202 (318)
T 2r6j_A 155 ANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVA 202 (318)
T ss_dssp CCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHT
T ss_pred cceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHh
Confidence 988776321111101 111222 356788999999999999998876
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-18 Score=153.75 Aligned_cols=174 Identities=16% Similarity=0.071 Sum_probs=118.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch------h---hhhhCCceeeccCc-------cccCCCCEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH------D---ELINMGITPSLKWT-------EATQKFPYV 146 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~------~---~l~~~~i~~~~~d~-------~~~~~~D~V 146 (272)
|++|+|||+ |+||++++++|+++ |++|++++|++... . .+...+++.+.+|. ++++++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence 578999997 99999999999999 99999999985321 1 22345777777664 256799999
Q ss_pred EEecCCCCCCChHHHHHHHHHHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--ee
Q 024143 147 IFCAPPSRSLDYPGDVRLAALSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (272)
Q Consensus 147 i~~a~~~~~~~~~~~~~~l~~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~ 223 (272)
||+++..... ....+...+ ...| ++|||+ | +||.. .+|..+..|. .+.| .+|..+|+++++.+ ++
T Consensus 82 i~~a~~~~~~-~~~~l~~aa-~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~-~~~y-~sK~~~e~~~~~~~~~~~ 149 (308)
T 1qyc_A 82 ISTVGSLQIE-SQVNIIKAI-KEVGTVKRFFP-S---EFGND----VDNVHAVEPA-KSVF-EVKAKVRRAIEAEGIPYT 149 (308)
T ss_dssp EECCCGGGSG-GGHHHHHHH-HHHCCCSEEEC-S---CCSSC----TTSCCCCTTH-HHHH-HHHHHHHHHHHHHTCCBE
T ss_pred EECCcchhhh-hHHHHHHHH-HhcCCCceEee-c---ccccC----ccccccCCcc-hhHH-HHHHHHHHHHHhcCCCeE
Confidence 9999864321 112222222 3456 999984 3 45532 2344443342 1468 89999999999877 89
Q ss_pred EEeeCceecCCCcHHHHH---H-HcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 224 VLRLAGLYKADRGAHVYW---L-QKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 224 IlRp~~iyG~~~~~~~~~---l-~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++||+.++|+....+... . ..+.. .++++..++++|++|+|++++.++
T Consensus 150 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l 203 (308)
T 1qyc_A 150 YVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAV 203 (308)
T ss_dssp EEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTS
T ss_pred EEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHH
Confidence 999999987532211100 1 11222 356788999999999999998765
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.1e-19 Score=156.64 Aligned_cols=175 Identities=13% Similarity=0.012 Sum_probs=118.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-c-----chhh---hhhCCceeeccCc-------cccCCCCE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-D-----HHDE---LINMGITPSLKWT-------EATQKFPY 145 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~-----~~~~---l~~~~i~~~~~d~-------~~~~~~D~ 145 (272)
+|++|+|||+ |+||++|+++|+++ |++|++++|++ . +... +...+++.+.+|. ++++++|+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~ 80 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSF--SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDI 80 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhC--CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCE
Confidence 4678999997 99999999999999 99999999986 2 2221 2345677776664 25789999
Q ss_pred EEEecCCCCCCChHHHHHHHHHHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--e
Q 024143 146 VIFCAPPSRSLDYPGDVRLAALSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--G 222 (272)
Q Consensus 146 Vi~~a~~~~~~~~~~~~~~l~~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~ 222 (272)
|||+++..... ....+...+ ...| ++|||+ ++||.. .+|..+..|. .+.| .+|..+|+++++.+ +
T Consensus 81 vi~~a~~~~~~-~~~~l~~aa-~~~g~v~~~v~----S~~g~~----~~~~~~~~p~-~~~y-~sK~~~e~~~~~~~~~~ 148 (321)
T 3c1o_A 81 VISALPFPMIS-SQIHIINAI-KAAGNIKRFLP----SDFGCE----EDRIKPLPPF-ESVL-EKKRIIRRAIEAAALPY 148 (321)
T ss_dssp EEECCCGGGSG-GGHHHHHHH-HHHCCCCEEEC----SCCSSC----GGGCCCCHHH-HHHH-HHHHHHHHHHHHHTCCB
T ss_pred EEECCCccchh-hHHHHHHHH-HHhCCccEEec----cccccC----ccccccCCCc-chHH-HHHHHHHHHHHHcCCCe
Confidence 99999864311 122222222 3456 999983 346532 1333333331 1478 99999999999877 8
Q ss_pred eEEeeCceecCCCcHHHHH----HHcCcc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 223 CVLRLAGLYKADRGAHVYW----LQKGTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 223 ~IlRp~~iyG~~~~~~~~~----l~~g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++||+.++++....+... ...+.. .+.++..++++|++|+|++++.++
T Consensus 149 ~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l 203 (321)
T 3c1o_A 149 TYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVA 203 (321)
T ss_dssp EEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHH
T ss_pred EEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHH
Confidence 9999998887532111100 111222 356788899999999999998875
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.5e-17 Score=141.36 Aligned_cols=179 Identities=11% Similarity=-0.034 Sum_probs=112.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc----ccc----CCCCEEEEecCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EAT----QKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~----~~~----~~~D~Vi~~a~~~~ 154 (272)
|++|||||+ |+||++++++|+++ |++|++++|++++... .+.....|. +++ .++|+|||+|+...
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~----~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARA--GHTVIGIDRGQADIEA----DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGV 74 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEEC----CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCT
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCChhHccc----cccCCcccHHHHHHHHHHcCCCccEEEECCCCCC
Confidence 578999997 99999999999999 9999999998765421 111111111 122 48999999999754
Q ss_pred -CCChHH-------HHHHHH------HHhcCCCeEEEEecceeecCCCC-CCC-------CCCCC-------CCCCCCCh
Q 024143 155 -SLDYPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDN-GAC-------DEDSP-------VVPIGRSP 205 (272)
Q Consensus 155 -~~~~~~-------~~~~l~------~~~~gvkr~V~~SS~~vYg~~~~-~~~-------~E~~p-------~~p~~~~~ 205 (272)
..++.+ ...+++ ....+.+++|++||..+|+.... .+. +|+.+ ..+. +.
T Consensus 75 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 152 (255)
T 2dkn_A 75 TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTH--LA 152 (255)
T ss_dssp TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHH--HH
T ss_pred cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcc--hh
Confidence 332211 111221 12345789999999999864311 111 11110 1122 68
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCccc--CCCCcccccccHHHHHHHHHHHh
Q 024143 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVD--SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 206 y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~--~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+.+|+..|.+++.+ + ++++||+.++|+...........+... ..+ ...++++++|+|++++.++
T Consensus 153 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~ 228 (255)
T 2dkn_A 153 YAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVA-PLGRGSEPREVAEAIAFLL 228 (255)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCC-TTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHH-HhcCCCCHHHHHHHHHHHh
Confidence 999999999887763 4 789999999987532211000001110 112 4557999999999998775
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=5.1e-15 Score=126.54 Aligned_cols=168 Identities=12% Similarity=0.023 Sum_probs=111.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--CCceeeccCc---c----cc---CCCCEEEEe
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT---E----AT---QKFPYVIFC 149 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--~~i~~~~~d~---~----~~---~~~D~Vi~~ 149 (272)
..+++||||+ |+||++++++|.++ |++|++++|++++.+.+.. .+++.+..|. + .+ ..+|+|||+
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN 83 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence 3478999997 99999999999999 9999999998766544332 2445544443 1 22 358999999
Q ss_pred cCCCCCCC--------hHHHH-------HHHH------HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 150 APPSRSLD--------YPGDV-------RLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 150 a~~~~~~~--------~~~~~-------~~l~------~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
|+...... +.+.+ ..+. ....+ .+++|++||...|... .+. ..|+
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~--~~Y~ 150 (244)
T 1cyd_A 84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-----------PNL--ITYS 150 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------TTB--HHHH
T ss_pred CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC-----------CCc--chhH
Confidence 98643211 11111 1111 11235 6899999998876531 112 5899
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCceecCCCc------HHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKADRG------AHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 208 ~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~------~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+|...|.+++.+ + +.++||+.++++... .+...+.++ ....++++++|+|++++.++
T Consensus 151 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~~~~l~ 223 (244)
T 1cyd_A 151 STKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKER------HPLRKFAEVEDVVNSILFLL 223 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHH------STTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhc------CCccCCCCHHHHHHHHHHHh
Confidence 9999999887653 3 678999999986421 111122222 22357999999999998765
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.60 E-value=6.8e-15 Score=128.79 Aligned_cols=174 Identities=14% Similarity=0.031 Sum_probs=110.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D 144 (272)
.++++||||+ |+||++++++|.++ |++|++++|++++...+.. ..+..+..|. + ...++|
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 81 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAA--GDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVD 81 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCC
Confidence 3578999996 99999999999999 9999999999877665432 2345555553 1 123799
Q ss_pred EEEEecCCCCC---CC-----hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRS---LD-----YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~---~~-----~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
+|||+|+.... .+ +.+. ++.++ +...+.+++|++||...+.. ..+.
T Consensus 82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~-- 148 (281)
T 3m1a_A 82 VLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS-----------FAGF-- 148 (281)
T ss_dssp EEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTC--
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC-----------CCCc--
Confidence 99999986321 11 1111 11121 13456789999999775432 1122
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc-----------HHHHHHHcCcccCCCCcccccccHHHH
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-----------AHVYWLQKGTVDSRPDHILNLIHYEVN 263 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~-----------~~~~~l~~g~~~~~~~~~~~~I~v~Dv 263 (272)
+.|+.+|...|.+.+.+ + +.++||+.++++... .+..................+++++|+
T Consensus 149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 228 (281)
T 3m1a_A 149 SAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKA 228 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHH
Confidence 68999999999887653 3 688999999876311 011111111111122334567899999
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
|++++.++
T Consensus 229 a~a~~~~~ 236 (281)
T 3m1a_A 229 AAAIRLAL 236 (281)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998765
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.5e-13 Score=117.45 Aligned_cols=168 Identities=14% Similarity=0.081 Sum_probs=110.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--CCceeeccCc---c----cc---CCCCEEEEe
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT---E----AT---QKFPYVIFC 149 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--~~i~~~~~d~---~----~~---~~~D~Vi~~ 149 (272)
..++|||||+ |+||++++++|.++ |++|++++|++++.+.+.. .+.+.+..|. + .+ .++|+|||+
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence 3468999997 99999999999999 9999999998766554432 2444444443 1 22 368999999
Q ss_pred cCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 150 APPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 150 a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
|+...... +.+.+ +.+. ....+ .+++|++||...|... .+. +.|+
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~--~~Y~ 150 (244)
T 3d3w_A 84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV-----------TNH--SVYC 150 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------TTB--HHHH
T ss_pred CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC-----------CCC--chHH
Confidence 98643211 11111 1111 11234 6899999998765421 122 6899
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 208 ~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+|...|.+++.+ + +.++||+.++++.... ....+.++ .....+++++|+|++++.++
T Consensus 151 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~~~~l~ 223 (244)
T 3d3w_A 151 STKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNR------IPLGKFAEVEHVVNAILFLL 223 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHT------CTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhh------CCCCCCcCHHHHHHHHHHHc
Confidence 9999999887653 3 6889999999875221 11112211 12346899999999988765
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=5.4e-14 Score=120.78 Aligned_cols=168 Identities=12% Similarity=0.065 Sum_probs=110.1
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h--CCceeeccCc---c----c-------cC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--MGITPSLKWT---E----A-------TQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~--~~i~~~~~d~---~----~-------~~ 141 (272)
..++|||||+ |+||++++++|.++ |++|++++|++++.+.+. . ..+..+.+|. + . ..
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 3478999996 99999999999999 999999999876543322 1 1344444443 1 1 23
Q ss_pred CCCEEEEecCCCCCC--C-----hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSL--D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~--~-----~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
++|+|||+|+..... + +.+.+ ..+. ....+.+++|++||...|... .+.
T Consensus 88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~ 156 (255)
T 1fmc_A 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-----------INM 156 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------TTC
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----------CCC
Confidence 899999999864321 1 11111 1111 123467899999998876421 122
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc-----HHHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-----AHVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~-----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
+.|+.+|...|.+.+.+ + +.++||+.++++... .....+..+.+ ...+++++|+|+++
T Consensus 157 --~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~ 228 (255)
T 1fmc_A 157 --TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTP------IRRLGQPQDIANAA 228 (255)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCS------SCSCBCHHHHHHHH
T ss_pred --cccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCC------cccCCCHHHHHHHH
Confidence 68999999999887653 3 688999999986311 11112222222 23478999999998
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 229 ~~l~ 232 (255)
T 1fmc_A 229 LFLC 232 (255)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-14 Score=118.41 Aligned_cols=153 Identities=12% Similarity=0.020 Sum_probs=100.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCcc----c---cCCCCEEEEecCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----A---TQKFPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~----~---~~~~D~Vi~~a~~~~~ 155 (272)
+|+|+|||+ |+||++++++|. + |++|++++|+++. +.....|.+ . ..++|+|||+|+....
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~--g~~V~~~~r~~~~--------~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 71 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-K--KAEVITAGRHSGD--------VTVDITNIDSIKKMYEQVGKVDAIVSATGSATF 71 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-T--TSEEEEEESSSSS--------EECCTTCHHHHHHHHHHHCCEEEEEECCCCCCC
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-C--CCeEEEEecCccc--------eeeecCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 358999996 999999999999 9 9999999998641 111222221 1 2358999999986432
Q ss_pred CC--------hHHH-------HHHHHHH--hc--CCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024143 156 LD--------YPGD-------VRLAALS--WN--GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKV 216 (272)
Q Consensus 156 ~~--------~~~~-------~~~l~~~--~~--gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~ 216 (272)
.. +.+. ...++.. .. ..+++|++||...|... .+. ..|+.+|...|.+
T Consensus 72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~--~~Y~~sK~~~~~~ 138 (202)
T 3d7l_A 72 SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI-----------VQG--ASAAMANGAVTAF 138 (202)
T ss_dssp CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC-----------TTC--HHHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC-----------Ccc--HHHHHHHHHHHHH
Confidence 11 1111 1122211 11 12699999997654321 122 5899999999998
Q ss_pred HHHc------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 217 ILEF------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 217 l~~~------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++.+ + ++++||+.++++... ..+ ......+++++|+|++++.++
T Consensus 139 ~~~~~~e~~~gi~v~~v~pg~v~~~~~~-----~~~------~~~~~~~~~~~dva~~~~~~~ 190 (202)
T 3d7l_A 139 AKSAAIEMPRGIRINTVSPNVLEESWDK-----LEP------FFEGFLPVPAAKVARAFEKSV 190 (202)
T ss_dssp HHHHTTSCSTTCEEEEEEECCBGGGHHH-----HGG------GSTTCCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHccCCeEEEEEecCccCCchhh-----hhh------hccccCCCCHHHHHHHHHHhh
Confidence 8763 3 689999999986421 111 123456899999999987654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=5.1e-14 Score=122.59 Aligned_cols=172 Identities=15% Similarity=0.075 Sum_probs=112.3
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---C--CceeeccCc---c----c-------cC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---M--GITPSLKWT---E----A-------TQ 141 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~--~i~~~~~d~---~----~-------~~ 141 (272)
+..+++||||+ |+||++++++|.++ |++|++++|++++...+.. . .+..+.+|. + + ..
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 91 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG 91 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 44578999997 99999999999999 9999999998655433221 1 355555553 1 1 23
Q ss_pred CCCEEEEecCCCCC-----CC-----hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS-----LD-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~-----~~-----~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
++|+|||+|+.... .+ +.+.+ ..+. ....+.+++|++||...|....
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------- 161 (278)
T 2bgk_A 92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE---------- 161 (278)
T ss_dssp CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------
T ss_pred CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----------
Confidence 79999999985421 11 11111 1111 1224678999999998775321
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-------HHHHHHcCcccCCCCcccccccHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-------HVYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-------~~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
.+. ..|+.+|...|.+++.+ + ++++||+.++++.... ....+... .+.....+++++|
T Consensus 162 ~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~d 235 (278)
T 2bgk_A 162 GVS--HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQ----AANLKGTLLRAED 235 (278)
T ss_dssp TSC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHH----TCSSCSCCCCHHH
T ss_pred CCC--cchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhc----ccccccccCCHHH
Confidence 122 58999999999877653 3 6899999999985321 11111111 1122345899999
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|++++.++
T Consensus 236 va~~~~~l~ 244 (278)
T 2bgk_A 236 VADAVAYLA 244 (278)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999988765
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.1e-13 Score=117.59 Aligned_cols=170 Identities=9% Similarity=0.030 Sum_probs=110.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hh--CCceeeccCc---c----c-------cC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN--MGITPSLKWT---E----A-------TQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~--~~i~~~~~d~---~----~-------~~ 141 (272)
..++|||||+ |+||++++++|.++ |++|++++|++++...+ .. ..+..+..|. + + ..
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEA--GARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3468999996 99999999999999 99999999986654322 21 1344455553 1 1 23
Q ss_pred CCCEEEEecCCCC-CC---C-----hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSR-SL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~-~~---~-----~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
++|+|||+|+... .. + +.+.+ ..+. ....+.+++|++||...+... +..
T Consensus 90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~~ 160 (260)
T 3awd_A 90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN---------RPQ 160 (260)
T ss_dssp CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSS
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC---------CCC
Confidence 7999999998543 11 1 11111 1111 113467899999998654321 111
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc-HH-----HHHHHcCcccCCCCcccccccHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-AH-----VYWLQKGTVDSRPDHILNLIHYEVNT 264 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~-~~-----~~~l~~g~~~~~~~~~~~~I~v~Dva 264 (272)
|. +.|+.+|...|.+++.+ + ++++||+.++++... .. ...+..+. ....+++.+|+|
T Consensus 161 ~~--~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva 232 (260)
T 3awd_A 161 QQ--AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGT------PMGRVGQPDEVA 232 (260)
T ss_dssp CC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTC------TTSSCBCHHHHH
T ss_pred Cc--cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcC------CcCCCCCHHHHH
Confidence 22 58999999999887653 3 789999999998654 11 11122222 123478999999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
++++.++
T Consensus 233 ~~~~~l~ 239 (260)
T 3awd_A 233 SVVQFLA 239 (260)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988664
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.7e-13 Score=116.12 Aligned_cols=167 Identities=10% Similarity=-0.025 Sum_probs=109.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-------CCceeeccCc---c----c-------cC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPSLKWT---E----A-------TQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-------~~i~~~~~d~---~----~-------~~ 141 (272)
+++++|||+ |+||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + + ..
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLAR--GDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 468999996 99999999999999 9999999998765543221 1234444443 1 1 23
Q ss_pred CCCEEEEecCCCCCCC-----------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD-----------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~-----------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
++|+|||+|+...... +.+.+ +.++ +...+.+++|++||...|...
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 149 (250)
T 2cfc_A 80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF---------- 149 (250)
T ss_dssp CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC----------
Confidence 7999999998643210 11111 1111 123467899999998765421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-H-----HHHHHcCcccCCCCcccccccHHH
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-H-----VYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-~-----~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
.+. +.|+.+|...|.+.+.+ + ++++||+.++++.... . ...+..+. ....+.+.+|
T Consensus 150 -~~~--~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~d 220 (250)
T 2cfc_A 150 -PGR--SAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARI------PQKEIGTAAQ 220 (250)
T ss_dssp -TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTC------TTCSCBCHHH
T ss_pred -CCc--hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcC------CCCCCcCHHH
Confidence 112 68999999999877653 3 6889999999986432 1 11122221 2234789999
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|++++.++
T Consensus 221 va~~~~~l~ 229 (250)
T 2cfc_A 221 VADAVMFLA 229 (250)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999988664
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.54 E-value=8.7e-15 Score=121.91 Aligned_cols=158 Identities=11% Similarity=0.027 Sum_probs=107.3
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc---c----ccC---CCCEEEEecCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E----ATQ---KFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~---~----~~~---~~D~Vi~~a~~ 152 (272)
|+++|||+ |+||++++++|.++ +|++++|++++.+.+.. .+.+.+.+|. + .++ ++|+|||+|+.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~----~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 76 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH----DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGK 76 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS----EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC----CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 47999997 99999999999875 89999998766554322 1114444443 1 233 89999999986
Q ss_pred CCCC--------ChHHHH-------HHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024143 153 SRSL--------DYPGDV-------RLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEK 215 (272)
Q Consensus 153 ~~~~--------~~~~~~-------~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~ 215 (272)
.... ++.+.+ ..++. ...+.++||++||...|... .+. +.|+.+|...|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~--~~Y~~sK~a~~~ 143 (207)
T 2yut_A 77 AGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQV-----------PGF--AAYAAAKGALEA 143 (207)
T ss_dssp CCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSS-----------TTB--HHHHHHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----------CCc--chHHHHHHHHHH
Confidence 4321 121111 11221 12356799999999887532 122 689999999998
Q ss_pred HHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 216 VILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 216 ~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++.+ + ++++||+.++++... ..+.....+++++|+|++++.++
T Consensus 144 ~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~------------~~~~~~~~~~~~~dva~~~~~~~ 196 (207)
T 2yut_A 144 YLEAARKELLREGVHLVLVRLPAVATGLWA------------PLGGPPKGALSPEEAARKVLEGL 196 (207)
T ss_dssp HHHHHHHHHHTTTCEEEEECCCCBCSGGGG------------GGTSCCTTCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhCCEEEEEecCcccCCCcc------------ccCCCCCCCCCHHHHHHHHHHHH
Confidence 87653 4 789999999986411 11233467999999999998775
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=4e-14 Score=121.67 Aligned_cols=170 Identities=10% Similarity=-0.036 Sum_probs=110.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCc-eeeccCc---c----c------cCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGI-TPSLKWT---E----A------TQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i-~~~~~d~---~----~------~~~~D 144 (272)
..++++|||+ |+||++++++|.++ |++|++++|++++.+.+.. ..+ ..+.+|. + + ..++|
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id 87 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAAS--GARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVS 87 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCc
Confidence 3468999997 99999999999999 9999999998766543321 122 4444443 1 1 25799
Q ss_pred EEEEecCCCCCC---C-----hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSL---D-----YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~~---~-----~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
+|||+|+..... + +.+. ++.++ ....+.+++|++||...|... +..|.
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~-- 156 (254)
T 2wsb_A 88 ILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------RPQFA-- 156 (254)
T ss_dssp EEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCB--
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------CCCcc--
Confidence 999999864321 1 1111 11111 123468899999998765421 11122
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH------HHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH------VYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~------~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
+.|+.+|...|.+.+.+ + ++++||+.++++..... ...+.+.. ....+++.+|+|++++
T Consensus 157 ~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~~~ 230 (254)
T 2wsb_A 157 SSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMT------PMGRCGEPSEIAAAAL 230 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTS------TTSSCBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcC------CCCCCCCHHHHHHHHH
Confidence 58999999999877653 3 68999999998642211 11111111 1234789999999988
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
.++
T Consensus 231 ~l~ 233 (254)
T 2wsb_A 231 FLA 233 (254)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=5.9e-13 Score=117.36 Aligned_cols=169 Identities=12% Similarity=-0.051 Sum_probs=108.3
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-------hCCceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-------~~~i~~~~~d~---~-----------~ 139 (272)
+..++++|||+ |+||++++++|.++ |++|++++|++++...+. ...+..+.+|. + .
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 44578999996 99999999999999 999999999876544321 12345555553 1 1
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHHH-------HHH----H--HH-hcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGDV-------RLA----A--LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l----~--~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
...+|+|||+|+...... +.+.+ ..+ + .. ..+.+++|++||...+...
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 171 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS---------- 171 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC----------
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC----------
Confidence 346899999998543211 11111 111 1 01 3356899999998765421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc-------HHHHHHHcCcccCCCCcccccccHH
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-------AHVYWLQKGTVDSRPDHILNLIHYE 261 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~-------~~~~~l~~g~~~~~~~~~~~~I~v~ 261 (272)
.+. ..|+.+|...|.+.+.+ + ++++||+.+++++.. .....+.++. ....+++++
T Consensus 172 -~~~--~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------p~~~~~~~~ 242 (302)
T 1w6u_A 172 -GFV--VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRI------PCGRLGTVE 242 (302)
T ss_dssp -TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTC------TTSSCBCHH
T ss_pred -CCc--chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcC------CcCCCCCHH
Confidence 122 58999999999877653 3 688999999987321 0111122222 123478999
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++.++
T Consensus 243 dva~~~~~l~ 252 (302)
T 1w6u_A 243 ELANLAAFLC 252 (302)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 9999988765
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.3e-13 Score=118.16 Aligned_cols=172 Identities=9% Similarity=-0.021 Sum_probs=108.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc---c-----------ccCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~---~-----------~~~~ 142 (272)
..++++|||+ |+||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + ....
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4478999997 99999999999999 9999999998765443321 2345555553 1 1236
Q ss_pred CCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCC-CeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
+|+|||+|+..... + +.+.+ +.++ +...+. +++|++||...|... .+
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~ 151 (251)
T 1zk4_A 83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-----------PS 151 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-----------TT
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC-----------CC
Confidence 99999999864321 1 11111 1111 123455 799999998765421 11
Q ss_pred CCCChHHHHHHHHHHHHHH---------cC--eeEEeeCceecCCCcHHH-HHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILE---------FG--GCVLRLAGLYKADRGAHV-YWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~---------~~--~~IlRp~~iyG~~~~~~~-~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
. ..|+.+|...|.+.+. .+ ++++||+.++++...... ..... . .........+++.+|+|++++
T Consensus 152 ~--~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~dva~~~~ 227 (251)
T 1zk4_A 152 L--GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAM-S-QRTKTPMGHIGEPNDIAYICV 227 (251)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHH-T-STTTCTTSSCBCHHHHHHHHH
T ss_pred C--ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhH-H-HhhcCCCCCCcCHHHHHHHHH
Confidence 2 6899999999877653 23 688999999976321100 00000 0 111112234889999999988
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
.++
T Consensus 228 ~l~ 230 (251)
T 1zk4_A 228 YLA 230 (251)
T ss_dssp HHH
T ss_pred HHc
Confidence 765
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=6e-14 Score=120.88 Aligned_cols=179 Identities=10% Similarity=-0.058 Sum_probs=102.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc----cc---c-CCCCEEEEecCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EA---T-QKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~----~~---~-~~~D~Vi~~a~~~~ 154 (272)
|+++||||+ |+||++++++|.++ |++|++++|++++... .+.....|. +. + .++|+|||+|+...
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~----~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~ 74 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAEVIA----DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP 74 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEEC----CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchhhcc----ccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence 578999997 99999999999999 9999999998765431 111111111 11 2 46799999999755
Q ss_pred -CCChHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCC-----------------CCCCCCCCC
Q 024143 155 -SLDYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDE-----------------DSPVVPIGR 203 (272)
Q Consensus 155 -~~~~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E-----------------~~p~~p~~~ 203 (272)
...+.+.+ +.++ +...+.+++|++||...|......+..+ ..+..+ .
T Consensus 75 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 152 (257)
T 1fjh_A 75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGG--N 152 (257)
T ss_dssp TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHH--H
T ss_pred CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCC--c
Confidence 33322111 1111 1244678999999998873211000000 011112 2
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH-HHHHHcCcccCC-CCcccccccHHHHHHHHHHHh
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH-VYWLQKGTVDSR-PDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~-~~~l~~g~~~~~-~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..|+.+|...|.+.+.+ + +.+++|+.++++..... ..... ...... ......+++.+|+|++++.++
T Consensus 153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dvA~~~~~l~ 230 (257)
T 1fjh_A 153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRY-GESIAKFVPPMGRRAEPSEMASVIAFLM 230 (257)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCSTTSCCCTHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhH-HHHHHhcccccCCCCCHHHHHHHHHHHh
Confidence 58999999999887654 3 68899999987753221 10000 000000 112234789999999988765
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=3.7e-13 Score=116.26 Aligned_cols=172 Identities=14% Similarity=0.012 Sum_probs=106.1
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-------------CCceeeccCc---c----c--
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------------MGITPSLKWT---E----A-- 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-------------~~i~~~~~d~---~----~-- 139 (272)
..++|+|||+ |+||++++++|.++ |++|++++|++++.+.+.. ..+..+.+|. + .
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGE--GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence 3468999996 99999999999999 9999999998765544321 2244444443 1 1
Q ss_pred -----cCCC-CEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcC-CCeEEEEecceeecCCCCCC
Q 024143 140 -----TQKF-PYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNG-EGSFLFTSSSAIYDCSDNGA 191 (272)
Q Consensus 140 -----~~~~-D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~g-vkr~V~~SS~~vYg~~~~~~ 191 (272)
...+ |+|||+|+...... +.+.+ ..+. ....+ .+++|++||...+...
T Consensus 84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 159 (264)
T 2pd6_A 84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN---- 159 (264)
T ss_dssp HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC----
T ss_pred HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC----
Confidence 2345 99999998643211 11111 1111 11234 5799999998654321
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHH
Q 024143 192 CDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 192 ~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
.+. ..|+.+|...|.+.+.+ + ++++||+.++++........... .. ........+++.+|
T Consensus 160 -------~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~-~~~~~~~~~~~~~d 228 (264)
T 2pd6_A 160 -------VGQ--TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVD-KI-TEMIPMGHLGDPED 228 (264)
T ss_dssp -------TTB--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------CT-GGGCTTCSCBCHHH
T ss_pred -------CCC--hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHH-HH-HHhCCCCCCCCHHH
Confidence 112 58999999988876643 3 68999999999864321111111 11 01111234789999
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|++++.++
T Consensus 229 va~~~~~l~ 237 (264)
T 2pd6_A 229 VADVVAFLA 237 (264)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999988765
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.52 E-value=1.3e-13 Score=119.48 Aligned_cols=172 Identities=16% Similarity=0.069 Sum_probs=97.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c----c-------c-
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E----A-------T- 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~----~-------~- 140 (272)
..++|||||+ |+||++++++|.++ |++|++++|++++...+. .. .+..+..|. + . .
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4478999996 99999999999999 999999999876544321 11 344444443 1 1 1
Q ss_pred CCCCEEEEecCCCCCC---C-----hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|+|||+|+..... + +.+.+ ..+. +...+.+++|++||...|... .
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~ 159 (266)
T 1xq1_A 91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-----------S 159 (266)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC-----------C
Confidence 6799999999864311 1 11111 1111 123568899999998876421 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH-HHHHcCcccCCCCcccccccHHHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV-YWLQKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~-~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
+. ..|+.+|...|.+.+.+ + ++++||+.++++...... ..... .. ........+++.+|+|++++.
T Consensus 160 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~dva~~~~~ 235 (266)
T 1xq1_A 160 VG--SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKK-VV-ISRKPLGRFGEPEEVSSLVAF 235 (266)
T ss_dssp -C--CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------CCGGGGHHHHHH
T ss_pred CC--chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHH-HH-HhcCCCCCCcCHHHHHHHHHH
Confidence 12 68999999999877653 3 789999999998533211 00000 00 011112347899999999876
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
++
T Consensus 236 l~ 237 (266)
T 1xq1_A 236 LC 237 (266)
T ss_dssp HT
T ss_pred Hc
Confidence 54
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1e-13 Score=120.19 Aligned_cols=174 Identities=13% Similarity=0.007 Sum_probs=109.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-------hCCceeeccCc---c----c-------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSLKWT---E----A-------T 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-------~~~i~~~~~d~---~----~-------~ 140 (272)
..+++||||+ |+||++++++|.++ |++|++++|++++.+.+. ...+..+.+|. + . .
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKE--GAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3468999996 99999999999999 999999999876544321 12244444553 1 1 2
Q ss_pred CCCCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|+|||+|+..... + +.+.+ +.++ +...+.+++|++||...|... .
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 152 (263)
T 3ai3_A 84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL-----------W 152 (263)
T ss_dssp SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------T
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----------C
Confidence 3799999999864321 1 11111 1111 123467899999998876431 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHc--C----cc---cCCC-CcccccccH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQK--G----TV---DSRP-DHILNLIHY 260 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~--g----~~---~~~~-~~~~~~I~v 260 (272)
+. ..|+.+|...|.+.+.+ + +.++||+.++++........+.. + .. .... .....+++.
T Consensus 153 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 230 (263)
T 3ai3_A 153 YE--PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASP 230 (263)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCH
T ss_pred Cc--chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCH
Confidence 12 58999999998877653 3 68899999998743211100000 0 00 0000 122458999
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|++++.++
T Consensus 231 ~dvA~~~~~l~ 241 (263)
T 3ai3_A 231 EELANFFVFLC 241 (263)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 99999988765
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.3e-13 Score=118.47 Aligned_cols=168 Identities=14% Similarity=0.011 Sum_probs=108.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC-Ccchhhhh----hC--CceeeccCc---c----cc-------C
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELI----NM--GITPSLKWT---E----AT-------Q 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~-~~~~~~l~----~~--~i~~~~~d~---~----~~-------~ 141 (272)
.+++||||+ |+||++++++|.++ |++|++++|+ +++.+.+. .. .+..+.+|. + .+ .
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARA--GAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 468999996 99999999999999 9999999998 66554332 11 244444553 1 12 3
Q ss_pred CCCEEEEecCC-CCCCC--------hHHHH-----------HHHH--HHhcC-----CCeEEEEecceeecCCCCCCCCC
Q 024143 142 KFPYVIFCAPP-SRSLD--------YPGDV-----------RLAA--LSWNG-----EGSFLFTSSSAIYDCSDNGACDE 194 (272)
Q Consensus 142 ~~D~Vi~~a~~-~~~~~--------~~~~~-----------~~l~--~~~~g-----vkr~V~~SS~~vYg~~~~~~~~E 194 (272)
++|+|||+|+. ..... +.+.+ +.++ ....+ .+++|++||...+...
T Consensus 85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------- 157 (258)
T 3afn_B 85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG------- 157 (258)
T ss_dssp SCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC-------
T ss_pred CCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC-------
Confidence 89999999986 32111 11111 0111 01112 2799999998765411
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH----HHHHHHcCcccCCCCcccccccHH
Q 024143 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYE 261 (272)
Q Consensus 195 ~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~----~~~~l~~g~~~~~~~~~~~~I~v~ 261 (272)
..+. ..|+.+|...|.+.+.+ + ++++||+.++++.... +...+.++. ....+++++
T Consensus 158 ---~~~~--~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 226 (258)
T 3afn_B 158 ---GPGA--GLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGI------PMGRFGTAE 226 (258)
T ss_dssp ---CTTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTC------TTCSCBCGG
T ss_pred ---CCCc--hHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccC------CCCcCCCHH
Confidence 1122 68999999999887653 3 6899999999874321 112233222 224589999
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++.++
T Consensus 227 dva~~~~~l~ 236 (258)
T 3afn_B 227 EMAPAFLFFA 236 (258)
T ss_dssp GTHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988765
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.9e-13 Score=115.51 Aligned_cols=167 Identities=11% Similarity=-0.056 Sum_probs=107.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE-ecCCcchhhhh----hC--Ccee-eccCc---c-----------cc
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELI----NM--GITP-SLKWT---E-----------AT 140 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~-~R~~~~~~~l~----~~--~i~~-~~~d~---~-----------~~ 140 (272)
|++|+|||+ |+||++++++|.++ |++|+++ .|++++.+.+. .. .+.. +..|. + .+
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~--G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAED--GFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL 78 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence 478999997 99999999999999 9999998 78766544321 11 2333 44442 1 13
Q ss_pred CCCCEEEEecCCCCCCC--------hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|+|||+|+...... +.+. ++.++ +...+.+++|++||...+....
T Consensus 79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 147 (245)
T 2ph3_A 79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNP----------- 147 (245)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCS-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCC-----------
Confidence 58999999998643211 1111 11111 1235678999999986543210
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
+. ..|+.+|...|.+.+.+ + ++++||+.++++... .....+..+. ....+++++|+|++
T Consensus 148 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~ 219 (245)
T 2ph3_A 148 GQ--ANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQI------PAGRFGRPEEVAEA 219 (245)
T ss_dssp SB--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTC------TTCSCBCHHHHHHH
T ss_pred CC--cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcC------CCCCCcCHHHHHHH
Confidence 12 58999999888776643 3 688999999876321 1111122211 12357899999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++.++
T Consensus 220 ~~~l~ 224 (245)
T 2ph3_A 220 VAFLV 224 (245)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 88765
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-13 Score=118.47 Aligned_cols=168 Identities=10% Similarity=-0.013 Sum_probs=108.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-------hCCceeeccCc---c----c-------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSLKWT---E----A-------T 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-------~~~i~~~~~d~---~----~-------~ 140 (272)
..++++|||+ |+||++++++|.++ |++|++++|++++.+.+. ...+..+..|. + + .
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASA--GSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV 83 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 3468999996 99999999999999 999999999876544332 12344444443 1 1 2
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|+|||+|+...... +.+.+ +.++ ....+.+++|++||...+... .
T Consensus 84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~ 152 (248)
T 2pnf_A 84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN-----------V 152 (248)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC-----------T
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC-----------C
Confidence 48999999998643211 11111 1111 123467899999997654321 0
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH----HHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----VYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~----~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
+. ..|+.+|...|.+.+.+ + ++++||+.++++....+ ...+.... ....+++++|+|++
T Consensus 153 ~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~ 224 (248)
T 2pnf_A 153 GQ--VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQI------PLGRFGSPEEVANV 224 (248)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTC------TTSSCBCHHHHHHH
T ss_pred CC--chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcC------CCCCccCHHHHHHH
Confidence 12 58999999998877643 3 68899999998753211 11112111 12348899999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++.++
T Consensus 225 ~~~l~ 229 (248)
T 2pnf_A 225 VLFLC 229 (248)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88765
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=7e-13 Score=113.24 Aligned_cols=161 Identities=13% Similarity=0.043 Sum_probs=107.7
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCC-------eEEEEecCCcchhhhhh----CC--ceeeccCc---c----c----
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTADHHDELIN----MG--ITPSLKWT---E----A---- 139 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~-------~V~~~~R~~~~~~~l~~----~~--i~~~~~d~---~----~---- 139 (272)
++|||||+ |+||++++++|.++ |+ +|++++|++++.+.+.. .+ +..+.+|. + +
T Consensus 3 k~vlITGasggiG~~la~~l~~~--G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARA--ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHH--TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHh--cCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence 57999996 99999999999999 99 99999998765543321 12 34444443 1 1
Q ss_pred ---cCCCCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCC
Q 024143 140 ---TQKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDED 195 (272)
Q Consensus 140 ---~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (272)
..++|+|||+|+...... +.+.+ ..+. +...+.+++|++||...|...
T Consensus 81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------- 152 (244)
T 2bd0_A 81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF-------- 152 (244)
T ss_dssp HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------
T ss_pred HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC--------
Confidence 237999999998643211 11111 1111 123467899999998876421
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
.+. +.|+.+|...|.+.+.+ + ++++||+.++++..... .. .. ...+++.+|+|++
T Consensus 153 ---~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~----~~-~~~~~~~~dva~~ 216 (244)
T 2bd0_A 153 ---RHS--SIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV------DD----EM-QALMMMPEDIAAP 216 (244)
T ss_dssp ---TTC--HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC------CS----TT-GGGSBCHHHHHHH
T ss_pred ---CCC--chhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc------cc----cc-cccCCCHHHHHHH
Confidence 122 68999999999877532 3 68899999998753210 00 01 2368999999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++.++
T Consensus 217 ~~~l~ 221 (244)
T 2bd0_A 217 VVQAY 221 (244)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88765
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.49 E-value=8.3e-13 Score=114.31 Aligned_cols=174 Identities=10% Similarity=-0.012 Sum_probs=111.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D 144 (272)
..+++||||+ |+||++++++|.++ |++|++++|++++...+.. ..+..+..|. + ...++|
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 84 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVRE--GATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLD 84 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 3468999996 99999999999999 9999999998766544322 2344444443 1 134899
Q ss_pred EEEEecCCCCCCC--------hHHHH-------HHHH------HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
+|||+|+...... +.+.+ ..+. ....+ ..++|++||...+... .+.
T Consensus 85 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~- 152 (259)
T 4e6p_A 85 ILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE-----------ALV- 152 (259)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TTB-
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC-----------CCC-
Confidence 9999999643211 11111 0111 11223 5699999998765321 112
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH---HHHHc---Ccc---cCCCCcccccccHHHHH
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV---YWLQK---GTV---DSRPDHILNLIHYEVNT 264 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~---~~l~~---g~~---~~~~~~~~~~I~v~Dva 264 (272)
..|+.+|...|.+.+.+ + +.+++|+.++++...... ..+.. +.. .........+.+++|+|
T Consensus 153 -~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva 231 (259)
T 4e6p_A 153 -AIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLT 231 (259)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHH
T ss_pred -hHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHH
Confidence 58999999999887653 3 678999999998643221 11111 110 12223445689999999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
++++..+
T Consensus 232 ~~v~~L~ 238 (259)
T 4e6p_A 232 GMAIFLA 238 (259)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9987654
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.49 E-value=2.3e-13 Score=116.80 Aligned_cols=171 Identities=12% Similarity=-0.018 Sum_probs=106.8
Q ss_pred CCcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-------ccCCCCE
Q 024143 80 GGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-------ATQKFPY 145 (272)
Q Consensus 80 ~~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-------~~~~~D~ 145 (272)
.....++|||||+ |+||++++++|.++ |++|++++|++++.+.+.. ..+.....|. + ...++|+
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKL--GSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDI 87 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 3455689999996 99999999999999 9999999998776654432 2344444543 1 2347999
Q ss_pred EEEecCCCCC--------CChHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRS--------LDYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 146 Vi~~a~~~~~--------~~~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
|||+|+.... +++.+.+ +.++ ....+.+++|++||...|... .+. .
T Consensus 88 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~ 154 (249)
T 3f9i_A 88 LVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN-----------PGQ--A 154 (249)
T ss_dssp EEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC-----------SCS--H
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC-----------CCC--c
Confidence 9999985431 1121111 1111 123466799999998766421 112 6
Q ss_pred hHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH----HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~----~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.|+.+|...|.+.+.+ + ..+++||.+..+.... ....+..+ .....+.+.+|+|++++.++
T Consensus 155 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~~~~l~ 228 (249)
T 3f9i_A 155 NYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQK------IPLGTYGIPEDVAYAVAFLA 228 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHH------CTTCSCBCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhc------CCCCCCcCHHHHHHHHHHHc
Confidence 8999999988876643 3 6789999998764321 11111111 22345788999999987664
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.6e-13 Score=117.08 Aligned_cols=168 Identities=11% Similarity=-0.027 Sum_probs=106.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec-CCcchhhh----hhC--CceeeccCc---c----c-------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDEL----INM--GITPSLKWT---E----A-------T 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~~~l----~~~--~i~~~~~d~---~----~-------~ 140 (272)
..++|||||+ |+||++++++|.++ |++|++++| ++++.+.+ ... .+..+.+|. + . .
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3468999996 99999999999999 999999999 65544332 111 233444443 1 1 2
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.++|+|||+|+...... +.+.+ +.++ ....+ .+++|++||...+.. .
T Consensus 84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~ 152 (261)
T 1gee_A 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-----------W 152 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----------C
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC-----------C
Confidence 37999999998643211 11111 1111 12334 689999999765421 1
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH------HHHHcCcccCCCCcccccccHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV------YWLQKGTVDSRPDHILNLIHYEVN 263 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~------~~l~~g~~~~~~~~~~~~I~v~Dv 263 (272)
.+. +.|+.+|...|.+.+.+ + ++++||+.++++...... ..+... .....+++.+|+
T Consensus 153 ~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dv 224 (261)
T 1gee_A 153 PLF--VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESM------IPMGYIGEPEEI 224 (261)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTT------CTTSSCBCHHHH
T ss_pred CCc--cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhc------CCCCCCcCHHHH
Confidence 122 68999999888776543 3 689999999987532210 111111 112347899999
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
|++++.++
T Consensus 225 a~~~~~l~ 232 (261)
T 1gee_A 225 AAVAAWLA 232 (261)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99988764
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=1.7e-12 Score=111.85 Aligned_cols=166 Identities=10% Similarity=0.039 Sum_probs=108.8
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc--------cccCCCCEEEEecCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------EATQKFPYVIFCAPP 152 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~--------~~~~~~D~Vi~~a~~ 152 (272)
...+++||||+ |+||++++++|.++ |++|++++|+++..+.+ ..+... .|. +.+.++|+|||+|+.
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~--~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag~ 91 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNEELLKRS--GHRYVV-CDLRKDLDLLFEKVKEVDILVLNAGG 91 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHT--CSEEEE-CCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHhh--CCeEEE-eeHHHHHHHHHHHhcCCCEEEECCCC
Confidence 45678999997 99999999999999 99999999987444332 123333 442 123489999999986
Q ss_pred CCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHH
Q 024143 153 SRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLL 211 (272)
Q Consensus 153 ~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~ 211 (272)
..... +.+.+ +.++ +...+.+++|++||...|... .+. ..|+.+|.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y~~sK~ 158 (249)
T 1o5i_A 92 PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI-----------ENL--YTSNSARM 158 (249)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTB--HHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC-----------CCC--chHHHHHH
Confidence 43211 11111 1111 123467899999998876421 112 58999999
Q ss_pred HHHHHHHHc-------C--eeEEeeCceecCCCcH----HHH-HHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 212 KAEKVILEF-------G--GCVLRLAGLYKADRGA----HVY-WLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 212 ~aE~~l~~~-------~--~~IlRp~~iyG~~~~~----~~~-~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..|.+.+.. + +.++||+.++++.... ... .+.... ....+++.+|+|++++.++
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~------p~~~~~~~~dvA~~i~~l~ 226 (249)
T 1o5i_A 159 ALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQI------PMRRMAKPEEIASVVAFLC 226 (249)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTS------TTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcC------CCCCCcCHHHHHHHHHHHc
Confidence 988776543 3 6889999999875321 111 122111 1234789999999987654
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=5.9e-13 Score=115.47 Aligned_cols=167 Identities=10% Similarity=-0.030 Sum_probs=108.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c----c-------cCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E----A-------TQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~----~-------~~~~D 144 (272)
..+++||||+ |+||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + . ..++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 83 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3468999996 99999999999999 9999999998766544321 1244444443 1 1 23899
Q ss_pred EEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
+|||+|+..... + +.+.+ +.++ +...+.+++|++||...|... .+.
T Consensus 84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~-- 150 (260)
T 1nff_A 84 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----------VAC-- 150 (260)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTB--
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC-----------CCc--
Confidence 999999864321 1 11111 1111 123467899999998765421 112
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..|+.+|...|.+.+.+ + ++++||+.++++... . ...... ......+++.+|+|++++.++
T Consensus 151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~----~~~~~~--~~~~~~~~~~~dvA~~v~~l~ 220 (260)
T 1nff_A 151 HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W----VPEDIF--QTALGRAAEPVEVSNLVVYLA 220 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T----SCTTCS--CCSSSSCBCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c----chhhHH--hCccCCCCCHHHHHHHHHHHh
Confidence 58999999999877642 3 688999999987422 0 001110 112234788999999987654
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.48 E-value=9.3e-13 Score=114.34 Aligned_cols=166 Identities=10% Similarity=0.007 Sum_probs=109.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------ccCCCCEEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVI 147 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~~~~D~Vi 147 (272)
..+++||||+ |+||++++++|.++ |++|++++|+.++... ..+..+.+|. + ...++|+||
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 101 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDR--NYRVVATSRSIKPSAD---PDIHTVAGDISKPETADRIVREGIERFGRIDSLV 101 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCCCCSS---TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhhccc---CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 3468999996 99999999999999 9999999998765432 2344554443 1 124899999
Q ss_pred EecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 148 FCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 148 ~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
|+|+...... +.+.+ ..+. +...+.+++|++||...+... +..+. ..|
T Consensus 102 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~~~~~--~~Y 170 (260)
T 3un1_A 102 NNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM---------VGMPS--ALA 170 (260)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB---------TTCCC--HHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC---------CCCcc--HHH
Confidence 9998643221 11111 0111 134567899999998764321 11122 689
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-HHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 207 ~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
+.+|...|.+.+.+ + +.+++|+.++++.... ....+.... ....+.+++|+|++++..
T Consensus 171 ~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~------p~~r~~~~~dva~av~~L 238 (260)
T 3un1_A 171 SLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLH------PVGRMGEIRDVVDAVLYL 238 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTS------TTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccC------CCCCCcCHHHHHHHHHHh
Confidence 99999999877643 2 6889999999885432 122222222 233477899999998753
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.48 E-value=6.1e-13 Score=113.03 Aligned_cols=160 Identities=13% Similarity=-0.004 Sum_probs=99.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC--CceeeccCc---c-----------ccCCCCEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSLKWT---E-----------ATQKFPYV 146 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~--~i~~~~~d~---~-----------~~~~~D~V 146 (272)
.++|+|||+ |+||++++++|.++ |++|++++|++++.+.+... .+..+..|. + ...++|+|
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAK--GYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSAL 82 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 357999996 99999999999999 99999999987665544321 344444443 1 12479999
Q ss_pred EEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCh
Q 024143 147 IFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (272)
Q Consensus 147 i~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~ 205 (272)
||+|+...... +.+.+ +.++ +...+.+++|++||...|... .+. ..
T Consensus 83 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~--~~ 149 (234)
T 2ehd_A 83 VNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF-----------KGG--AA 149 (234)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC-----------TTC--HH
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC-----------CCC--ch
Confidence 99998643211 11111 1111 123567899999998765321 122 68
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 206 y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+.+|...|.+.+.+ + ++++||+.+..+.... . . .. ..++..+|+|++++.++
T Consensus 150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~----~----~~-~~~~~~~dvA~~~~~l~ 211 (234)
T 2ehd_A 150 YNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN----T----P----GQ-AWKLKPEDVAQAVLFAL 211 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------------CCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc----c----c----cc-cCCCCHHHHHHHHHHHh
Confidence 999999888766542 3 6889999887543211 0 0 00 12679999999988764
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.48 E-value=9.5e-13 Score=114.05 Aligned_cols=173 Identities=12% Similarity=0.032 Sum_probs=108.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---CceeeccCc---c----c-------cCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT---E----A-------TQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~i~~~~~d~---~----~-------~~~~D~ 145 (272)
.+++||||+ |+||++++++|.++ |++|++++|++++.+.+... .+..+..|. + + ..++|+
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~ 89 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKA--GATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL 89 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999996 99999999999999 99999999987665443221 344444443 1 1 237999
Q ss_pred EEEecCCCCCCC--------hHHHHH-------HH----H--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRSLD--------YPGDVR-------LA----A--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~~~-------~l----~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
|||+|+...... +.+.+. .+ + ....+ .+++|++||...+... | +.
T Consensus 90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~~-- 156 (263)
T 3ak4_A 90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA---------P--LL-- 156 (263)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC---------T--TC--
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC---------C--Cc--
Confidence 999998643211 111110 11 1 12334 6899999998754321 1 12
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHH--Hc----Ccc---cCCCCcccccccHHHHHH
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWL--QK----GTV---DSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l--~~----g~~---~~~~~~~~~~I~v~Dva~ 265 (272)
..|+.+|...|.+.+.+ + +.++||+.++++......... .. ... .........+++.+|+|+
T Consensus 157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ 236 (263)
T 3ak4_A 157 AHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVAD 236 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 58999999998877653 3 688999999876422111000 00 000 011112235899999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++.++
T Consensus 237 ~v~~l~ 242 (263)
T 3ak4_A 237 VVVFLA 242 (263)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988764
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=6.6e-13 Score=114.58 Aligned_cols=174 Identities=10% Similarity=-0.052 Sum_probs=108.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hh---hCCceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LI---NMGITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~---~~~i~~~~~d~---~-----------~~~ 141 (272)
.++|||||+ |+||++++++|.++ |++|++++|+..+... +. ...+..+.+|. + ...
T Consensus 14 ~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 91 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG 91 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 468999996 99999999999999 9999999997554322 11 12344444543 1 134
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.+|+|||+|+...... +.+.+ ..+. ....+ .+++|++||...+..... +..+..
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~ 167 (265)
T 1h5q_A 92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGSL 167 (265)
T ss_dssp SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEEC
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----cccccc
Confidence 6899999998643221 11111 1111 11223 589999999876532110 011222
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH----HHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~----~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
+. ..|+.+|...|.+++.+ + ++++||+.++++.... ....+....+ ...+++.+|+|++
T Consensus 168 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~ 239 (265)
T 1h5q_A 168 TQ--VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIP------LNRFAQPEEMTGQ 239 (265)
T ss_dssp SC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCT------TSSCBCGGGGHHH
T ss_pred cc--cccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCc------ccCCCCHHHHHHH
Confidence 33 68999999999887653 3 6889999999874321 1111221111 2247889999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++.++
T Consensus 240 ~~~l~ 244 (265)
T 1h5q_A 240 AILLL 244 (265)
T ss_dssp HHHHH
T ss_pred HHhhc
Confidence 87664
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.4e-12 Score=111.99 Aligned_cols=168 Identities=10% Similarity=0.048 Sum_probs=109.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-CceeeccCc---c-------ccCCCCEEEEecC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWT---E-------ATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i~~~~~d~---~-------~~~~~D~Vi~~a~ 151 (272)
.++++|||+ |+||++++++|.++ |++|++++|++++.+.+... .+..+..|. + ...++|+|||+|+
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag 83 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFARE--GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence 468999997 99999999999999 99999999987665544321 344444543 1 2457999999998
Q ss_pred CCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHH
Q 024143 152 PSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (272)
Q Consensus 152 ~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk 210 (272)
...... +.+.+ +.++ +...+.+++|++||...+... |.....|+.+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~~Y~~sK 151 (246)
T 2ag5_A 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG------------VVNRCVYSTTK 151 (246)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC------------CTTBHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC------------CCCCccHHHHH
Confidence 643211 11111 1111 123467899999998764321 10125899999
Q ss_pred HHHHHHHHHc-------C--eeEEeeCceecCCCcH-HH---------HHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 211 LKAEKVILEF-------G--GCVLRLAGLYKADRGA-HV---------YWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 211 ~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-~~---------~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
...|.+.+.+ + +.++||+.++++.... .. ..+.+.. ....+++.+|+|++++.++
T Consensus 152 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dvA~~v~~l~ 225 (246)
T 2ag5_A 152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ------KTGRFATAEEIAMLCVYLA 225 (246)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTC------TTSSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcC------CCCCCCCHHHHHHHHHHHh
Confidence 9999887653 3 6889999999864221 10 0111111 1123789999999987654
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=1e-12 Score=112.10 Aligned_cols=163 Identities=11% Similarity=0.005 Sum_probs=99.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCC--CeEEEEecCCcchhhhhhC---CceeeccCc---c----ccC---------
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELINM---GITPSLKWT---E----ATQ--------- 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g--~~V~~~~R~~~~~~~l~~~---~i~~~~~d~---~----~~~--------- 141 (272)
+++|+|||+ |+||++++++|+++ | ++|++++|++++.+.+... .+..+..|. + .++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~--g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKD--KNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTC--TTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEecCCchHHHHHHHHHHhc--CCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 468999996 99999999999999 9 9999999988776655432 344555553 1 122
Q ss_pred CCCEEEEecCCCC-CC---C-----hHHHH-------HHHH------HHhc------C-----CCeEEEEecceeecCCC
Q 024143 142 KFPYVIFCAPPSR-SL---D-----YPGDV-------RLAA------LSWN------G-----EGSFLFTSSSAIYDCSD 188 (272)
Q Consensus 142 ~~D~Vi~~a~~~~-~~---~-----~~~~~-------~~l~------~~~~------g-----vkr~V~~SS~~vYg~~~ 188 (272)
++|+|||+|+... .. + +.+.+ ..+. .... + .+++|++||...+....
T Consensus 81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 160 (250)
T 1yo6_A 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN 160 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence 7999999998644 11 1 11111 1111 0122 4 68999999987654321
Q ss_pred CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCccccccc
Q 024143 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIH 259 (272)
Q Consensus 189 ~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~ 259 (272)
.++.+..+. ..|+.+|+..|.+++.+ + +.++||+.+..+.... ..+++
T Consensus 161 ----~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~ 217 (250)
T 1yo6_A 161 ----TSGSAQFPV--LAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------------NAALT 217 (250)
T ss_dssp ----CSTTSSSCB--HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------
T ss_pred ----ccccccCCc--cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------CCCCC
Confidence 111111222 68999999999887643 3 6789999987653210 12467
Q ss_pred HHHHHHHHHHHh
Q 024143 260 YEVNTLVLFIAS 271 (272)
Q Consensus 260 v~Dva~ai~~a~ 271 (272)
.+|+|+.++.++
T Consensus 218 ~~~~a~~~~~~~ 229 (250)
T 1yo6_A 218 VEQSTAELISSF 229 (250)
T ss_dssp -HHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 788887777654
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.46 E-value=7.2e-13 Score=114.39 Aligned_cols=173 Identities=10% Similarity=-0.033 Sum_probs=108.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc--hhhhhhC--CceeeccCc---c----c-------cCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINM--GITPSLKWT---E----A-------TQKFP 144 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~--~~~l~~~--~i~~~~~d~---~----~-------~~~~D 144 (272)
.+++||||+ |+||++++++|.++ |++|++++|+++. ...+... .+..+..|. + + ..++|
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARA--GANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999997 99999999999999 9999999998652 1222222 234444443 1 1 23899
Q ss_pred EEEEecCCCCCCC--------hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
+|||+|+...... +.+. ++.++ +...+.+++|++||...|... .+.
T Consensus 82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~-- 148 (255)
T 2q2v_A 82 ILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS-----------TGK-- 148 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTB--
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC-----------CCc--
Confidence 9999998643211 1111 11111 134567899999998765321 012
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHH-HHHcC-------ccc-CCCCcccccccHHHHHH
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVY-WLQKG-------TVD-SRPDHILNLIHYEVNTL 265 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~-~l~~g-------~~~-~~~~~~~~~I~v~Dva~ 265 (272)
..|+.+|...|.+.+.+ + +.++||+.++++....... .-..+ ..+ ........+++.+|+|+
T Consensus 149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ 228 (255)
T 2q2v_A 149 AAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGE 228 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHH
Confidence 58999999998877643 3 6889999999864221110 00000 001 12223345899999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++.++
T Consensus 229 ~~~~l~ 234 (255)
T 2q2v_A 229 LVLFLC 234 (255)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 988664
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.46 E-value=8.4e-13 Score=114.27 Aligned_cols=174 Identities=9% Similarity=-0.008 Sum_probs=107.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-------C-CceeeccCc---c----ccC-----
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------M-GITPSLKWT---E----ATQ----- 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-------~-~i~~~~~d~---~----~~~----- 141 (272)
..+++||||+ |+||++++++|.++ |++|++++|++++.+.+.. . .+..+..|. + .++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARN--GARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 3468999996 99999999999999 9999999998765443221 1 345555553 1 111
Q ss_pred -CCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 -KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 -~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
++|+|||+|+...... +.+.+ +.++ +...+.+++|++||...|... .
T Consensus 84 ~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 152 (260)
T 2z1n_A 84 GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW-----------Q 152 (260)
T ss_dssp TCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------T
T ss_pred cCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC-----------C
Confidence 4999999998643211 11111 1111 123467899999998876421 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH-H-----HHHcC---cccCCCCcccccccHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV-Y-----WLQKG---TVDSRPDHILNLIHYE 261 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~-~-----~l~~g---~~~~~~~~~~~~I~v~ 261 (272)
+. ..|+.+|...|.+.+.+ + +.++||+.++++...... . ..... ...........+.+.+
T Consensus 153 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ 230 (260)
T 2z1n_A 153 DL--ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPE 230 (260)
T ss_dssp TB--HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHH
T ss_pred CC--chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHH
Confidence 12 58999999988876643 3 688999999987533100 0 00000 0011111223478999
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++.++
T Consensus 231 dva~~v~~l~ 240 (260)
T 2z1n_A 231 ELASVVAFLA 240 (260)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999988765
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.46 E-value=1.4e-12 Score=114.46 Aligned_cols=168 Identities=10% Similarity=-0.040 Sum_probs=106.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h--CCceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--MGITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~--~~i~~~~~d~---~-----------~~~ 141 (272)
..++|+|||+ |+||++++++|.++ |++|++++|++++.+.+. . ..+..+.+|. + ...
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4478999996 99999999999999 999999988866544322 1 1234444443 1 124
Q ss_pred CCCEEEEecCCCCCC---C-----hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSL---D-----YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
++|+|||+|+..... + +.+. ++.++ ....+.+++|++||...+.... +
T Consensus 121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~ 189 (285)
T 2c07_A 121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV-----------G 189 (285)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------T
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC-----------C
Confidence 799999999864321 1 1111 11111 1234678999999987653210 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH----HHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~----~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
. ..|+.+|...|.+.+.+ + ++++||+.++++.... ....+.... ....+++.+|+|+++
T Consensus 190 ~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~dvA~~~ 261 (285)
T 2c07_A 190 Q--ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNI------PAGRMGTPEEVANLA 261 (285)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTC------TTSSCBCHHHHHHHH
T ss_pred C--chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhC------CCCCCCCHHHHHHHH
Confidence 2 58999999988776543 3 6889999998874321 111112111 122478999999998
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 262 ~~l~ 265 (285)
T 2c07_A 262 CFLS 265 (285)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7664
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.45 E-value=5e-12 Score=110.61 Aligned_cols=168 Identities=8% Similarity=-0.025 Sum_probs=107.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C-CceeeccCc---c-----------ccCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~-~i~~~~~d~---~-----------~~~~ 142 (272)
..++++|||+ |.||++++++|.++ |++|++++|++++.+.+.. . .+..+..|. + ...+
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEA--GARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSAR 105 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 4468999997 99999999999999 9999999998765443321 1 234444442 1 1347
Q ss_pred CCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCC----CeEEEEecceeecCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGE----GSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gv----kr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
+|+|||+|+..... + +.+.+ +.++ +...+. +++|++||...|....
T Consensus 106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~--------- 176 (276)
T 2b4q_A 106 LDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG--------- 176 (276)
T ss_dssp CSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC---------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC---------
Confidence 99999999854321 1 11111 1111 112333 8999999987653210
Q ss_pred CCCCCCC-hHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH----HHHHc--CcccCCCCcccccccHH
Q 024143 198 VVPIGRS-PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV----YWLQK--GTVDSRPDHILNLIHYE 261 (272)
Q Consensus 198 ~~p~~~~-~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~----~~l~~--g~~~~~~~~~~~~I~v~ 261 (272)
.. . .|+.+|...|.+.+.+ + +.+++|+.+..+...... ..+.. ..+ ...+.+.+
T Consensus 177 --~~--~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------~~r~~~p~ 246 (276)
T 2b4q_A 177 --EQ--AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIP------MGRWGRPE 246 (276)
T ss_dssp --CS--CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTST------TSSCCCHH
T ss_pred --CC--ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCC------CCCcCCHH
Confidence 11 3 7999999999877653 3 688999999877532211 11111 111 22478999
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++.++
T Consensus 247 dvA~~v~~l~ 256 (276)
T 2b4q_A 247 EMAALAISLA 256 (276)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988764
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.4e-12 Score=110.90 Aligned_cols=162 Identities=14% Similarity=-0.010 Sum_probs=104.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c----cc------CCCCEEEEe
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----AT------QKFPYVIFC 149 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~----~~------~~~D~Vi~~ 149 (272)
++++||||+ |+||++++++|.++ |++|++++|+++ .+ .+..+..|. + .+ .++|+|||+
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~-~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ 73 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKAR--GYRVVVLDLRRE-GE-----DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSA 73 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCC-SS-----SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEccCcc-cc-----ceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEc
Confidence 368999997 99999999999999 999999999865 22 234444442 1 22 278999999
Q ss_pred cCCCCCC------------ChHHHH-------HHHH---H---HhcC------CCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 150 APPSRSL------------DYPGDV-------RLAA---L---SWNG------EGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 150 a~~~~~~------------~~~~~~-------~~l~---~---~~~g------vkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
|+..... ++.+.+ ..+. . ...+ .+++|++||...|....
T Consensus 74 ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 143 (242)
T 1uay_A 74 AGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI---------- 143 (242)
T ss_dssp CCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT----------
T ss_pred ccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC----------
Confidence 9864321 111111 1111 0 1111 23999999998875321
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
+. ..|+.+|...|.+.+.+ + ++++||+.++++... .....+.++.+. ...+++.+|+|+
T Consensus 144 -~~--~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~dva~ 215 (242)
T 1uay_A 144 -GQ--AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPF-----PPRLGRPEEYAA 215 (242)
T ss_dssp -TC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCS-----SCSCCCHHHHHH
T ss_pred -CC--chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCC-----cccCCCHHHHHH
Confidence 22 68999999988876543 3 689999999986421 111122222221 034789999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++.++
T Consensus 216 ~~~~l~ 221 (242)
T 1uay_A 216 LVLHIL 221 (242)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988764
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.3e-13 Score=118.62 Aligned_cols=169 Identities=8% Similarity=-0.049 Sum_probs=109.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------ccCCCCEEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVI 147 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~~~~D~Vi 147 (272)
..+++||||+ |.||++++++|.++ |++|++++|+.++.+.+....+..+..|. + ...++|++|
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 92 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEE--GHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIV 92 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 3468999997 99999999999999 99999999987766554434455554543 1 134799999
Q ss_pred EecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 148 FCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 148 ~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
|+|+...... +.+.+ +.++ +...+.+++|++||...|... .+ ...|
T Consensus 93 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-----------~~--~~~Y 159 (266)
T 3p19_A 93 NNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF-----------PD--HAAY 159 (266)
T ss_dssp ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------TT--CHHH
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC-----------CC--CchH
Confidence 9999643211 11111 1111 123567899999998765321 11 2589
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-----HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-----HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 207 ~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-----~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|...|.+.+.+ + +..++||.+..+.... ....+..... ....+++.+|+|++++.++
T Consensus 160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----~~~r~~~pedvA~av~~l~ 233 (266)
T 3p19_A 160 CGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRV-----DMGGVLAADDVARAVLFAY 233 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHH-----HTTCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcc-----cccCCCCHHHHHHHHHHHH
Confidence 99999998776543 3 6789999998764211 1101111000 1223788999999988765
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=5.7e-13 Score=115.33 Aligned_cols=168 Identities=10% Similarity=-0.026 Sum_probs=107.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC--ceeeccCc---c-----------cc-
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------AT- 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~--i~~~~~d~---~-----------~~- 140 (272)
..+++||||+ |+||++++++|.++ |++|++++|++++.+.+. ..+ +..+..|. + ..
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3478999996 99999999999999 999999999876544321 122 34444443 1 12
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|+|||+|+...... +.+.+ ..+. +...+.+++|++||...+... .
T Consensus 86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 154 (260)
T 2ae2_A 86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV-----------P 154 (260)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC-----------T
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------C
Confidence 57999999999643211 11111 1111 123567899999998754321 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHH---HHHcCcccCCCCcccccccHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVY---WLQKGTVDSRPDHILNLIHYE 261 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~---~l~~g~~~~~~~~~~~~I~v~ 261 (272)
+. ..|+.+|...|.+.+.+ + +.+++|+.++.+.... ... .+.+. .....+++.+
T Consensus 155 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 226 (260)
T 2ae2_A 155 YE--AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDR------CALRRMGEPK 226 (260)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHT------STTCSCBCHH
T ss_pred Cc--chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhc------CCCCCCCCHH
Confidence 12 58999999999887653 3 6889999998652110 000 11111 1223478999
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++.++
T Consensus 227 dvA~~v~~l~ 236 (260)
T 2ae2_A 227 ELAAMVAFLC 236 (260)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9999987654
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=3.5e-12 Score=110.13 Aligned_cols=170 Identities=11% Similarity=-0.081 Sum_probs=108.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---CceeeccCc---c----c-------cCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT---E----A-------TQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~i~~~~~d~---~----~-------~~~~D 144 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+... .+..+..|. + . ..++|
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 81 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3478999997 99999999999999 99999999987665543221 233344442 1 1 23899
Q ss_pred EEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
+|||+|+...... +.+.+ +.++ +...+.+++|++||...|... .+.
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~-- 148 (254)
T 1hdc_A 82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL-----------ALT-- 148 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTC--
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-----------CCc--
Confidence 9999998643211 11111 1111 123467899999998765321 112
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcc--cCCCCcccccc-cHHHHHHHHHHHh
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTV--DSRPDHILNLI-HYEVNTLVLFIAS 271 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~--~~~~~~~~~~I-~v~Dva~ai~~a~ 271 (272)
..|+.+|...|.+.+.+ + +.++||+.++++... .+..... .........+. +.+|+|++++.++
T Consensus 149 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~ 224 (254)
T 1hdc_A 149 SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA----ETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL 224 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH----HHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcccc----ccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Confidence 68999999999877653 3 688999999875321 1111100 11111122367 9999999988664
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.44 E-value=5e-12 Score=108.01 Aligned_cols=166 Identities=16% Similarity=0.120 Sum_probs=107.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc--c-----------ccCCCCEEEEec
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--E-----------ATQKFPYVIFCA 150 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~--~-----------~~~~~D~Vi~~a 150 (272)
++++|||+ |.||++++++|.++ |++|++++|++++... ..++..+..|. + ...++|++||+|
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~A 78 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVAR--GYRVAIASRNPEEAAQ--SLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAA 78 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHH--HHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHH--hhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECC
Confidence 68999997 99999999999999 9999999998765322 12344444332 1 234799999999
Q ss_pred CCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHH
Q 024143 151 PPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (272)
Q Consensus 151 ~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~s 209 (272)
+..... + +.+.+ +.++ +...+.+++|++||...|.... ..+. ..|+.+
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~--~~Y~~s 147 (239)
T 2ekp_A 79 AVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG---------PVPI--PAYTTA 147 (239)
T ss_dssp CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------TSCC--HHHHHH
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC---------CCCC--ccHHHH
Confidence 864321 1 11111 1111 1234678999999988764320 0122 689999
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH------HHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 210 LLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV------YWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~------~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|...|.+.+.+ + +.++||+.++.+...... ..+.... ....+...+|+|++++.++
T Consensus 148 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------p~~~~~~~~dvA~~~~~l~ 218 (239)
T 2ekp_A 148 KTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARI------PMGRWARPEEIARVAAVLC 218 (239)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTC------TTSSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHc
Confidence 99998876643 3 688999999876422110 1111111 1224789999999987654
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.5e-12 Score=109.84 Aligned_cols=166 Identities=11% Similarity=0.010 Sum_probs=99.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE-ecCCcchhhh----hhC--CceeeccCc---c----c-------cC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDEL----INM--GITPSLKWT---E----A-------TQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~-~R~~~~~~~l----~~~--~i~~~~~d~---~----~-------~~ 141 (272)
.+++||||+ |+||++++++|.++ |++|+++ .|++++.+.+ ... .+..+..|. + . ..
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~--G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNM--GANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG 82 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CcEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 468999996 99999999999999 9999999 5665544332 111 244444543 1 1 23
Q ss_pred CCCEEEEecCCCCC--------CChHHHH-----------HHHH--HHhcCCCeEEEEecce-eecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS--------LDYPGDV-----------RLAA--LSWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~--------~~~~~~~-----------~~l~--~~~~gvkr~V~~SS~~-vYg~~~~~~~~E~~p~~ 199 (272)
++|+|||+|+.... +++.+.+ +.++ +...+.+++|++||.. .|+..
T Consensus 83 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------ 150 (247)
T 2hq1_A 83 RIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA------------ 150 (247)
T ss_dssp CCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------------
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC------------
Confidence 89999999986421 1111111 1111 1234678999999974 44421
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
+. ..|+.+|...|.+.+.+ + +.++||+.+..+... .....+..+ .....+++.+|+|++
T Consensus 151 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~ 222 (247)
T 2hq1_A 151 GQ--ANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNN------IPLKRFGTPEEVANV 222 (247)
T ss_dssp -C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTT------STTSSCBCHHHHHHH
T ss_pred CC--cHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhh------CCCCCCCCHHHHHHH
Confidence 12 58999999999887654 3 678999998764211 111112222 122358899999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++.++
T Consensus 223 ~~~l~ 227 (247)
T 2hq1_A 223 VGFLA 227 (247)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 87654
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.44 E-value=4.7e-13 Score=115.49 Aligned_cols=171 Identities=11% Similarity=0.011 Sum_probs=108.6
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~ 143 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + ....+
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTL 81 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 34478999996 99999999999999 9999999998766544322 2344444543 1 13468
Q ss_pred CEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
|+|||+|+..... + +.+.+ +.++ +...+ +++|++||...|... .+.
T Consensus 82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~~~- 148 (253)
T 1hxh_A 82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI-----------EQY- 148 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC-----------TTB-
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC-----------CCC-
Confidence 9999999864321 1 11111 1111 12345 899999998765321 112
Q ss_pred CChHHHHHHHHHHHHHHc---------C--eeEEeeCceecCCCcHHHHHHHcCc--c-cCC---CCcccccccHHHHHH
Q 024143 203 RSPRTDVLLKAEKVILEF---------G--GCVLRLAGLYKADRGAHVYWLQKGT--V-DSR---PDHILNLIHYEVNTL 265 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~---------~--~~IlRp~~iyG~~~~~~~~~l~~g~--~-~~~---~~~~~~~I~v~Dva~ 265 (272)
..|+.+|...|.+.+.+ + +.++||+.++++..... +.... . ... ......+.+.+|+|+
T Consensus 149 -~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ 224 (253)
T 1hxh_A 149 -AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQAS---LPKGVSKEMVLHDPKLNRAGRAYMPERIAQ 224 (253)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHH---SCTTCCHHHHBCBTTTBTTCCEECHHHHHH
T ss_pred -ccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhc---cchhhhHHHHhhhhccCccCCCCCHHHHHH
Confidence 58999999998776643 5 68899999987642110 00000 0 000 111234789999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++.++
T Consensus 225 ~~~~l~ 230 (253)
T 1hxh_A 225 LVLFLA 230 (253)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 988764
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=4.5e-13 Score=115.92 Aligned_cols=168 Identities=13% Similarity=0.074 Sum_probs=108.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhC--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~--~i~~~~~d~---~-----------~~~ 141 (272)
..+++||||+ |+||++++++|.++ |++|++++|++++.+.+ ... .+..+.+|. + ...
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 90 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQD--GAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG 90 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3478999996 99999999999999 99999999987654432 222 234444442 1 124
Q ss_pred CCCEEEEecCCCCC-C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~-~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
++|+|||+|+.... . + +.+.+ +.++ +...+.+++|++||...|... .
T Consensus 91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 159 (260)
T 2zat_A 91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF-----------P 159 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------T
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC-----------C
Confidence 89999999986321 1 1 11111 1111 123567899999998876421 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH------HHHHcCcccCCCCcccccccHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV------YWLQKGTVDSRPDHILNLIHYEVNT 264 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~------~~l~~g~~~~~~~~~~~~I~v~Dva 264 (272)
+. ..|+.+|...|.+.+.+ + +.+++|+.+..+...... ..+... .....+++.+|+|
T Consensus 160 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva 231 (260)
T 2zat_A 160 NL--GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES------LRIRRLGNPEDCA 231 (260)
T ss_dssp TB--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHH------HTCSSCBCGGGGH
T ss_pred Cc--hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhc------CCCCCCCCHHHHH
Confidence 22 58999999999887654 3 678999999877532110 011111 1123478999999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
++++.++
T Consensus 232 ~~v~~l~ 238 (260)
T 2zat_A 232 GIVSFLC 238 (260)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9987654
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.44 E-value=1.6e-12 Score=112.66 Aligned_cols=174 Identities=12% Similarity=0.039 Sum_probs=107.3
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec-CCcchhhh----hhC--CceeeccCc---c----c-------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDEL----INM--GITPSLKWT---E----A------- 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~~~l----~~~--~i~~~~~d~---~----~------- 139 (272)
+..++|||||+ |+||++++++|.++ |++|++++| ++++.+.+ ... .+..+.+|. + +
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 44578999996 99999999999999 999999999 55443322 211 234444443 1 1
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHHH-------HHHH---HHh--cCCCeEEEEecceee-cCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGDV-------RLAA---LSW--NGEGSFLFTSSSAIY-DCSDNGACDEDSPV 198 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~---~~~--~gvkr~V~~SS~~vY-g~~~~~~~~E~~p~ 198 (272)
..++|+|||+|+...... +.+.+ ..+. ... .+ +++|++||...| ...
T Consensus 97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~----------- 164 (274)
T 1ja9_A 97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGI----------- 164 (274)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSC-----------
T ss_pred cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCC-----------
Confidence 237999999998643211 11111 1111 111 23 799999998876 321
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHH-----c---Ccc---cCCCCcccccc
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQ-----K---GTV---DSRPDHILNLI 258 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~-----~---g~~---~~~~~~~~~~I 258 (272)
.+. ..|+.+|...|.+++.+ + ++++||+.++++.......... . +.. ...+.....++
T Consensus 165 ~~~--~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (274)
T 1ja9_A 165 PNH--ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIG 242 (274)
T ss_dssp CSC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCB
T ss_pred CCC--chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCcc
Confidence 112 58999999999887653 3 6889999998753110000000 0 000 01122345689
Q ss_pred cHHHHHHHHHHHh
Q 024143 259 HYEVNTLVLFIAS 271 (272)
Q Consensus 259 ~v~Dva~ai~~a~ 271 (272)
+++|+|++++.++
T Consensus 243 ~~~dva~~i~~l~ 255 (274)
T 1ja9_A 243 YPADIGRAVSALC 255 (274)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 9999999988765
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=2.1e-12 Score=111.61 Aligned_cols=172 Identities=10% Similarity=-0.005 Sum_probs=105.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc---c-----------ccCCCCEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-----------ATQKFPYVI 147 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~---~-----------~~~~~D~Vi 147 (272)
.+++||||+ |+||++++++|.++ |++|++++|++++ ..+.. .....+..|. + ...++|+||
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv 82 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV 82 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhH-HHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999997 99999999999999 9999999998766 33221 1113334442 1 124799999
Q ss_pred EecCCCCCC---C-----hHHHH-------HHH----H--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 148 FCAPPSRSL---D-----YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 148 ~~a~~~~~~---~-----~~~~~-------~~l----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
|+|+..... + +.+.+ ..+ + +...+.+++|++||...+... .+. ..|
T Consensus 83 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y 149 (256)
T 2d1y_A 83 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-----------QEN--AAY 149 (256)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----------TTB--HHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-----------CCC--hhH
Confidence 999864321 1 11111 111 1 123467899999998754221 112 589
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHH-HHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVY-WLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 207 ~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~-~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|...|.+.+.+ + +.+++|+.+..+....... ....... .........+++.+|+|++++.++
T Consensus 150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~ 227 (256)
T 2d1y_A 150 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 227 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 99999999877653 3 5789999987542111000 0101111 112223346899999999988764
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-12 Score=113.95 Aligned_cols=167 Identities=14% Similarity=0.075 Sum_probs=103.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---------CCceeeccCc---c----c------
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---------MGITPSLKWT---E----A------ 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---------~~i~~~~~d~---~----~------ 139 (272)
..+++||||+ |+||++++++|.++ |++|++++|++++.+.+.. ..+..+.+|. + +
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 3468999996 99999999999999 9999999998765543211 1234444443 1 1
Q ss_pred -cCCCCEEEEecCCCCCC---------C---hHHHH-----------HHHH--HHhcCCCeEEEEeccee-ecCCCCCCC
Q 024143 140 -TQKFPYVIFCAPPSRSL---------D---YPGDV-----------RLAA--LSWNGEGSFLFTSSSAI-YDCSDNGAC 192 (272)
Q Consensus 140 -~~~~D~Vi~~a~~~~~~---------~---~~~~~-----------~~l~--~~~~gvkr~V~~SS~~v-Yg~~~~~~~ 192 (272)
..++|+|||+|+..... . +.+.+ +.++ +...+ +++|++||... +...
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~----- 156 (278)
T 1spx_A 83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT----- 156 (278)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC-----
T ss_pred HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC-----
Confidence 23899999999853211 1 11111 1111 11234 89999999875 4321
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH-------------HHHHHcCcccCC
Q 024143 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH-------------VYWLQKGTVDSR 250 (272)
Q Consensus 193 ~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~-------------~~~l~~g~~~~~ 250 (272)
.+. ..|+.+|...|.+.+.+ + +.++||+.++++..... ...+....
T Consensus 157 ------~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 224 (278)
T 1spx_A 157 ------PDF--PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECV---- 224 (278)
T ss_dssp ------TTS--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHC----
T ss_pred ------CCc--cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcC----
Confidence 112 58999999999877653 3 68999999998742210 00111101
Q ss_pred CCcccccccHHHHHHHHHHHh
Q 024143 251 PDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 251 ~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+ ...+++.+|+|++++.++
T Consensus 225 p--~~~~~~~~dvA~~v~~l~ 243 (278)
T 1spx_A 225 P--AGVMGQPQDIAEVIAFLA 243 (278)
T ss_dssp T--TSSCBCHHHHHHHHHHHH
T ss_pred C--CcCCCCHHHHHHHHHHHc
Confidence 1 124789999999987654
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.43 E-value=5.5e-12 Score=108.55 Aligned_cols=169 Identities=9% Similarity=0.055 Sum_probs=98.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------ccCCCCEEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVIF 148 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~~~~D~Vi~ 148 (272)
.+++||||+ |.||++++++|.++ |++|++++|+++.. ..++..+..|. + ...++|+|||
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEA--GAKVTGFDQAFTQE----QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCCCSS----CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCchhhh----cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 468999997 99999999999999 99999999986531 12344444442 1 1247999999
Q ss_pred ecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 149 CAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 149 ~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
+|+..... + +.+.+ +.++ +...+.+++|++||...+... .+. ..|+
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y~ 147 (250)
T 2fwm_X 81 AAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR-----------IGM--SAYG 147 (250)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------TTC--HHHH
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-----------CCC--chHH
Confidence 99864321 1 11111 1111 123467899999998765321 122 6899
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH--HHHHcCcccC------CCCcccccccHHHHHHHHHHH
Q 024143 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV--YWLQKGTVDS------RPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 208 ~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~--~~l~~g~~~~------~~~~~~~~I~v~Dva~ai~~a 270 (272)
.+|...|.+.+.+ + +.++||+.++++...... .......... .......+.+.+|+|++++.+
T Consensus 148 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l 227 (250)
T 2fwm_X 148 ASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFL 227 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHH
Confidence 9999999877653 3 688999999987532110 0000000000 011123478899999998866
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 228 ~ 228 (250)
T 2fwm_X 228 A 228 (250)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=7e-12 Score=109.11 Aligned_cols=170 Identities=15% Similarity=0.031 Sum_probs=108.0
Q ss_pred CcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-----h--CCceeeccCc---c-----------
Q 024143 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----N--MGITPSLKWT---E----------- 138 (272)
Q Consensus 81 ~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-----~--~~i~~~~~d~---~----------- 138 (272)
.+..+++||||+ |.||++++++|.++ |++|++++|++++...+. . ..+..+.+|. +
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE 95 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 355678999996 99999999999999 999999999876544321 1 1234444443 1
Q ss_pred ccCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEeccee-ecCCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAI-YDCSDNGACDEDS 196 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~ 196 (272)
...++|+|||+|+...... +.+.+ +.++ +...+.+++|++||..+ +.
T Consensus 96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----------- 164 (267)
T 1vl8_A 96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV----------- 164 (267)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-----------
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc-----------
Confidence 1247999999998643221 11111 1111 12346789999999763 11
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH------HHHHcCcccCCCCcccccccHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV------YWLQKGTVDSRPDHILNLIHYE 261 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~------~~l~~g~~~~~~~~~~~~I~v~ 261 (272)
+..+. ..|+.+|...|.+.+.+ + +.+++|+.+..+...... ..+....+ ...+++.+
T Consensus 165 ~~~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------~~~~~~p~ 236 (267)
T 1vl8_A 165 TMPNI--SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIP------LGRTGVPE 236 (267)
T ss_dssp CSSSC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCT------TSSCBCGG
T ss_pred CCCCC--hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCC------CCCCcCHH
Confidence 11112 58999999999877653 3 688999999876532211 11111111 12367889
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++.++
T Consensus 237 dvA~~v~~l~ 246 (267)
T 1vl8_A 237 DLKGVAVFLA 246 (267)
T ss_dssp GGHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9999887654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-12 Score=113.92 Aligned_cols=163 Identities=13% Similarity=0.010 Sum_probs=107.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h--CCceeeccCc---c-----------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--MGITPSLKWT---E-----------AT 140 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~--~~i~~~~~d~---~-----------~~ 140 (272)
+..++|||||+ |+||++++++|.++ |++|++++|++++.+.+. . ..+..+..|. + ..
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 45578999996 99999999999999 999999999876554332 1 1344454553 1 12
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|+|||+|+...... +.+.+ +.++ +...+.+++|++||...|... .
T Consensus 107 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~ 175 (272)
T 1yb1_A 107 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV-----------P 175 (272)
T ss_dssp CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH-----------H
T ss_pred CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC-----------C
Confidence 47999999998644221 11111 1111 123567899999998876421 0
Q ss_pred CCCCChHHHHHHHHHHHHHHc----------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF----------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~----------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
+. ..|+.+|...|.+.+.+ + ++++||+.+.++.... .. .....+++.+|+|+++
T Consensus 176 ~~--~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~--------~~----~~~~~~~~~~dva~~i 241 (272)
T 1yb1_A 176 FL--LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN--------PS----TSLGPTLEPEEVVNRL 241 (272)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--------TH----HHHCCCCCHHHHHHHH
T ss_pred Cc--hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc--------cc----ccccCCCCHHHHHHHH
Confidence 11 57999999998776531 3 6889999998764210 00 0123468899999998
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 242 ~~~~ 245 (272)
T 1yb1_A 242 MHGI 245 (272)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=5.5e-12 Score=110.02 Aligned_cols=168 Identities=13% Similarity=0.033 Sum_probs=105.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhC--CceeeccCc---c-----------cc-
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------AT- 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~--~i~~~~~d~---~-----------~~- 140 (272)
..++++|||+ |.||++++++|.++ |++|++++|++++.+.+ ... .+..+..|. + ..
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3478999996 99999999999999 99999999987654432 111 344444443 1 12
Q ss_pred CCCCEEEEecCCCCCC---C-----hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|++||+|+..... + +...+ ..+. +...+.+++|++||...|... .
T Consensus 98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~ 166 (273)
T 1ae1_A 98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL-----------P 166 (273)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC-----------T
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC-----------C
Confidence 5799999999864321 1 11111 0111 123467899999998876421 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH----------HHHHHcCcccCCCCcccccccH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----------VYWLQKGTVDSRPDHILNLIHY 260 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~----------~~~l~~g~~~~~~~~~~~~I~v 260 (272)
+. ..|+.+|...|.+.+.+ + +.+++|+.++++..... ...+.... ....+.+.
T Consensus 167 ~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~p 238 (273)
T 1ae1_A 167 SV--SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT------PMGRAGKP 238 (273)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHS------TTCSCBCH
T ss_pred Cc--chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcC------CCCCCcCH
Confidence 12 58999999999877653 3 68899999998752211 00111111 11237889
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|++++.++
T Consensus 239 ~dvA~~v~~l~ 249 (273)
T 1ae1_A 239 QEVSALIAFLC 249 (273)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999987654
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.1e-12 Score=114.87 Aligned_cols=168 Identities=14% Similarity=0.013 Sum_probs=108.0
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhC-----CceeeccCc---c-----------
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM-----GITPSLKWT---E----------- 138 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~-----~i~~~~~d~---~----------- 138 (272)
..+++||||+ |+||++++++|.++ |++|++++|++++.+.. ... .+..+..|. +
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAA--GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4578999996 99999999999999 99999999987654432 222 233444443 1
Q ss_pred ccCCCCEEEEecCCC-CCCC--------hHHHHH-------HHH------HHhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPS-RSLD--------YPGDVR-------LAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~-~~~~--------~~~~~~-------~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
...++|++||+|+.. .... +.+.+. .+. ....+..++|++||...|...
T Consensus 88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 158 (281)
T 3svt_A 88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH--------- 158 (281)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC---------
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC---------
Confidence 134799999999962 2111 111111 111 123455699999998876421
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH------HHHHHcCcccCCCCcccccccHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH------VYWLQKGTVDSRPDHILNLIHYE 261 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~------~~~l~~g~~~~~~~~~~~~I~v~ 261 (272)
.+. ..|+.+|...|.+.+.+ + +.+++|+.++.+..... ...+.... ....+.+++
T Consensus 159 --~~~--~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~------p~~r~~~~~ 228 (281)
T 3svt_A 159 --RWF--GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCT------PLPRQGEVE 228 (281)
T ss_dssp --TTC--THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHC------SSSSCBCHH
T ss_pred --CCC--hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcC------CCCCCCCHH
Confidence 112 68999999999887653 2 57899999987643211 11111111 223467899
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++..+
T Consensus 229 dva~~~~~l~ 238 (281)
T 3svt_A 229 DVANMAMFLL 238 (281)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999987654
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.5e-11 Score=107.10 Aligned_cols=169 Identities=11% Similarity=0.009 Sum_probs=110.8
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~ 143 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++++...+.. ..+..+..|. + ...++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 86 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARA--GARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRL 86 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 34578999996 99999999999999 9999999999877654432 2344444443 1 13489
Q ss_pred CEEEEecCCCCC-C----C-----hHHHHH-------HHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRS-L----D-----YPGDVR-------LAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 144 D~Vi~~a~~~~~-~----~-----~~~~~~-------~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
|++||+|+.... . + +.+.+. .+. +...+.+++|++||...+... .+
T Consensus 87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~ 155 (271)
T 3tzq_B 87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY-----------DM 155 (271)
T ss_dssp CEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBC-----------SS
T ss_pred CEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCC-----------CC
Confidence 999999996521 1 1 111111 111 134567899999998765321 12
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc-----HHHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-----AHVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~-----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
. ..|+.+|...|.+.+.+ + +.+++|+.++++... .....+....+ ...+...+|+|++
T Consensus 156 ~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~------~~r~~~p~dvA~~ 227 (271)
T 3tzq_B 156 S--TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHL------AGRIGEPHEIAEL 227 (271)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTST------TSSCBCHHHHHHH
T ss_pred C--hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCC------CCCCcCHHHHHHH
Confidence 2 68999999999877653 3 678999999988533 11112222222 1236788999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 228 v~~L~ 232 (271)
T 3tzq_B 228 VCFLA 232 (271)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87654
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.42 E-value=6.1e-12 Score=110.38 Aligned_cols=175 Identities=11% Similarity=-0.011 Sum_probs=106.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC-Ccchhhh----hh---CCceeeccCc---c-----------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDEL----IN---MGITPSLKWT---E----------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~-~~~~~~l----~~---~~i~~~~~d~---~----------- 138 (272)
+..+++||||+ |.||++++++|.++ |++|++++|+ ++..+.+ .. ..+..+..|. +
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKA--GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD 100 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 34478999996 99999999999999 9999999994 3333322 11 2334444443 1
Q ss_pred ccCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
...++|++||+|+...... +.+.+ +.++ +...+..++|++||...+...
T Consensus 101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 170 (281)
T 3v2h_A 101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS---------- 170 (281)
T ss_dssp HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC----------
Confidence 2348999999999743221 11111 1111 123466899999998754321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHH------HHcCc----ccCCCCcccccc
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYW------LQKGT----VDSRPDHILNLI 258 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~------l~~g~----~~~~~~~~~~~I 258 (272)
.. ...|+.+|...|.+.+.+ + +..++||.++.+........ +.... ....+.....++
T Consensus 171 -~~--~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 247 (281)
T 3v2h_A 171 -PF--KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFI 247 (281)
T ss_dssp -TT--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCB
T ss_pred -CC--chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCcc
Confidence 11 258999999999877643 3 57899999998743211100 00000 112334456689
Q ss_pred cHHHHHHHHHHHh
Q 024143 259 HYEVNTLVLFIAS 271 (272)
Q Consensus 259 ~v~Dva~ai~~a~ 271 (272)
+++|+|++++..+
T Consensus 248 ~~edvA~~v~~L~ 260 (281)
T 3v2h_A 248 TVEQVASLALYLA 260 (281)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHc
Confidence 9999999987654
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.41 E-value=3.6e-12 Score=108.73 Aligned_cols=166 Identities=9% Similarity=-0.063 Sum_probs=104.8
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE-ecCCcchhhhh----h--CCceeeccCc---c----c-------cCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELI----N--MGITPSLKWT---E----A-------TQK 142 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~-~R~~~~~~~l~----~--~~i~~~~~d~---~----~-------~~~ 142 (272)
++|+|||+ |+||++++++|.++ |++|+++ .|++++.+.+. . ..+..+.+|. + . ..+
T Consensus 2 k~vlVTGasggiG~~la~~l~~~--G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 57999996 99999999999999 9999995 78765543321 1 1233444443 1 1 237
Q ss_pred CCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|+|||+|+...... +.+.+ ..+. ....+.+++|++||...+.... +.
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~ 148 (244)
T 1edo_A 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI-----------GQ 148 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------TC
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCC-----------CC
Confidence 999999998644211 11111 1111 1224678999999986543210 12
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
..|+.+|...|.+.+.+ + ++++||+.++++... .....+.... ....+++.+|+|++++
T Consensus 149 --~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~~~ 220 (244)
T 1edo_A 149 --ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTI------PLGRTGQPENVAGLVE 220 (244)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSC------TTCSCBCHHHHHHHHH
T ss_pred --ccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcC------CCCCCCCHHHHHHHHH
Confidence 58999999888776543 3 688999999876321 1111122111 1234789999999987
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
.++
T Consensus 221 ~l~ 223 (244)
T 1edo_A 221 FLA 223 (244)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.41 E-value=7.6e-12 Score=108.71 Aligned_cols=169 Identities=8% Similarity=-0.026 Sum_probs=105.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------ccCCCCEEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVI 147 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~~~~D~Vi 147 (272)
..+++||||+ |+||++++++|.++ |++|++++|++++ ...+..+..|. + ...++|+||
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv 79 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDE--GSKVIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLV 79 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3478999996 99999999999999 9999999998655 12344444442 1 123799999
Q ss_pred EecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 148 FCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 148 ~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
|+|+..... + +.+.+ +.++ +...+.+++|++||...|... .+. ..|
T Consensus 80 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y 146 (264)
T 2dtx_A 80 NNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT-----------KNA--SAY 146 (264)
T ss_dssp ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC-----------TTB--HHH
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC-----------CCc--hhH
Confidence 999864321 1 11111 1111 123467899999998765321 122 589
Q ss_pred HHHHHHHHHHHHHcC--------eeEEeeCceecCCCcHHHHHHH--cC----cc---cCCCCcccccccHHHHHHHHHH
Q 024143 207 TDVLLKAEKVILEFG--------GCVLRLAGLYKADRGAHVYWLQ--KG----TV---DSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 207 ~~sk~~aE~~l~~~~--------~~IlRp~~iyG~~~~~~~~~l~--~g----~~---~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
+.+|...|.+.+.+. +.+++|+.+..+.......... .. .. .........+++.+|+|++++.
T Consensus 147 ~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~ 226 (264)
T 2dtx_A 147 VTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAF 226 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 999999998876542 5789999987642111100000 00 00 0001122347899999999887
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
++
T Consensus 227 l~ 228 (264)
T 2dtx_A 227 LA 228 (264)
T ss_dssp HH
T ss_pred Hh
Confidence 64
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=3.9e-12 Score=109.00 Aligned_cols=168 Identities=8% Similarity=-0.033 Sum_probs=109.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~ 141 (272)
..++++|||+ |.||++++++|.++ |++|++++|++++.+.+. .. .+..+..|. + ...
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASK--GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3478999996 99999999999999 999999999876654432 12 344444443 1 134
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.+|+|||+|+...... +.+.+ ..+. ....+..++|++||...+.... +
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 150 (247)
T 3lyl_A 82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP-----------G 150 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------T
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC-----------C
Confidence 7899999999753221 11111 0111 1234567999999987654211 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH----HHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~----~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
...|+.+|...|.+.+.+ + +.+++|+.+..+.... ....+..+ .....+.+.+|+|+++
T Consensus 151 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~i 222 (247)
T 3lyl_A 151 --QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATK------IPSGQIGEPKDIAAAV 222 (247)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTT------STTCCCBCHHHHHHHH
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhc------CCCCCCcCHHHHHHHH
Confidence 268999999888776643 3 6789999998774321 11112222 2234578999999998
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+..+
T Consensus 223 ~~l~ 226 (247)
T 3lyl_A 223 AFLA 226 (247)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=2.2e-12 Score=112.64 Aligned_cols=172 Identities=15% Similarity=0.058 Sum_probs=105.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC----ceeeccCc---c----c-------
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG----ITPSLKWT---E----A------- 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~----i~~~~~d~---~----~------- 139 (272)
..+++||||+ |+||++++++|.++ |++|++++|++++.+.+. ..+ +..+.+|. + +
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4478999996 99999999999999 999999999876554332 112 33444443 1 1
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHH-----------HHHHH--HHhcCC--CeEEEEecceeecCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGD-----------VRLAA--LSWNGE--GSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~-----------~~~l~--~~~~gv--kr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
..++|+|||+|+...... +.+. ++.++ +...+. +++|++||...|...
T Consensus 109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~--------- 179 (279)
T 1xg5_A 109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL--------- 179 (279)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC---------
Confidence 237999999998643211 1111 12222 123454 799999998865321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHH---------cC--eeEEeeCceecCCCcHHHHHHHcCcc--cCCCCcccccccHHHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILE---------FG--GCVLRLAGLYKADRGAHVYWLQKGTV--DSRPDHILNLIHYEVN 263 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~---------~~--~~IlRp~~iyG~~~~~~~~~l~~g~~--~~~~~~~~~~I~v~Dv 263 (272)
+..+. ..|+.+|...|.+.+. .+ +.+++|+.+..+... ....... .........+++.+|+
T Consensus 180 ~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~dv 253 (279)
T 1xg5_A 180 PLSVT--HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF----KLHDKDPEKAAATYEQMKCLKPEDV 253 (279)
T ss_dssp SCGGG--HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH----HHTTTCHHHHHHHHC---CBCHHHH
T ss_pred CCCCC--chhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh----hhcccChhHHhhhcccccCCCHHHH
Confidence 11122 5899999998876542 23 688999999765311 1101000 0000012247899999
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
|++++.++
T Consensus 254 A~~i~~l~ 261 (279)
T 1xg5_A 254 AEAVIYVL 261 (279)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99988765
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=4e-12 Score=109.94 Aligned_cols=173 Identities=12% Similarity=0.007 Sum_probs=105.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhhhh-------hCCceeeccCc---c-----------cc
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELI-------NMGITPSLKWT---E-----------AT 140 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~l~-------~~~i~~~~~d~---~-----------~~ 140 (272)
.+++||||+ |+||++++++|.++ |++|++++|++++ .+.+. ...+..+..|. + ..
T Consensus 4 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 4 GKVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 468999996 99999999999999 9999999998765 43322 12344444553 1 12
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|+|||+|+...... +.+.+ +.++ +...+.+++|++||...+... .
T Consensus 82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 150 (260)
T 1x1t_A 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS-----------A 150 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------T
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC-----------C
Confidence 47999999998643211 11111 1111 123467899999998765321 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHc--C----cc---c-CCCCcccccccH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQK--G----TV---D-SRPDHILNLIHY 260 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~--g----~~---~-~~~~~~~~~I~v 260 (272)
+. ..|+.+|...|.+.+.+ + +.+++|+.++.+........... + .. . ........+.+.
T Consensus 151 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p 228 (260)
T 1x1t_A 151 NK--SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTP 228 (260)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCH
T ss_pred CC--chHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCH
Confidence 12 58999999999877643 3 67899999988743211100000 0 00 0 001122357899
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|++++.++
T Consensus 229 ~dva~~~~~l~ 239 (260)
T 1x1t_A 229 EQLGGTAVFLA 239 (260)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999987664
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=1.7e-11 Score=105.15 Aligned_cols=166 Identities=13% Similarity=0.044 Sum_probs=107.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc---c-----------ccCCCCEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-----------ATQKFPYVI 147 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~---~-----------~~~~~D~Vi 147 (272)
.++++|||+ |.||++++++|.++ |++|++++|++++.+.+.. .++..+..|. + ....+|+||
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv 82 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKE--GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV 82 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999996 99999999999999 9999999998776654432 2455555553 1 124699999
Q ss_pred EecCCCCCCC--------hHHHH-------HHH----H--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 148 FCAPPSRSLD--------YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 148 ~~a~~~~~~~--------~~~~~-------~~l----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
|+|+...... +.+.+ ..+ + +...+.+++|++||...++.. +. ..|
T Consensus 83 n~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~--~~Y 148 (245)
T 1uls_A 83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------------GQ--ANY 148 (245)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT------------TC--HHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC------------Cc--hhH
Confidence 9998643211 11111 011 1 123457899999998833311 11 589
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH----HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 207 ~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~----~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|...+.+.+.. + +.+++|+.+..+.... ....+....+. ..+++.+|+|++++.++
T Consensus 149 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~------~~~~~~~dvA~~v~~l~ 220 (245)
T 1uls_A 149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPL------GRAGKPLEVAYAALFLL 220 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTT------CSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCC------CCCcCHHHHHHHHHHHh
Confidence 99999888766543 3 6889999998764221 11112211111 23788999999987654
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-11 Score=106.53 Aligned_cols=170 Identities=12% Similarity=0.030 Sum_probs=104.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-cchhh-hhhC--CceeeccCc---c-----------ccCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE-LINM--GITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~~~-l~~~--~i~~~~~d~---~-----------~~~~~ 143 (272)
..++++|||+ |.||++++++|.++ |++|++++|++ ++.+. +... .+..+..|. + ...++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC 83 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 3468999996 99999999999999 99999999987 54432 2222 244444443 1 13589
Q ss_pred CEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
|+|||+|+...... +.+.+ +.++ +...+.+++|++||...|... .+.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~- 151 (249)
T 2ew8_A 84 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI-----------EAY- 151 (249)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-----------SSC-
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-----------CCc-
Confidence 99999998643211 11111 1111 123467899999998866421 112
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc-HHH-H--HHHcCcccCCCCcccccccHHHHHHHHHH
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-AHV-Y--WLQKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~-~~~-~--~l~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
..|+.+|...|.+.+.+ + +.+++|+.++.+... ... . .... ... .....+.+.+|+|++++.
T Consensus 152 -~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~---~~~~~~~~p~dva~~~~~ 226 (249)
T 2ew8_A 152 -THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLP-NML---QAIPRLQVPLDLTGAAAF 226 (249)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CTT---SSSCSCCCTHHHHHHHHH
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHH-Hhh---CccCCCCCHHHHHHHHHH
Confidence 58999999999877653 3 688999999876432 111 0 0000 000 122347899999999887
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
++
T Consensus 227 l~ 228 (249)
T 2ew8_A 227 LA 228 (249)
T ss_dssp HT
T ss_pred Hc
Confidence 65
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.40 E-value=1e-11 Score=107.39 Aligned_cols=174 Identities=10% Similarity=0.087 Sum_probs=107.3
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C--CceeeccCc---c-----------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--GITPSLKWT---E-----------AT 140 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~--~i~~~~~d~---~-----------~~ 140 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. . .+..+..|. + ..
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKE--GARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34578999996 99999999999999 9999999998776554321 1 234444443 1 13
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHHH-----------HHH--H-HhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDVR-----------LAA--L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~~-----------~l~--~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.++|++||+|+...... +.+.+. .++ + ...+..++|++||...+...
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 150 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG----------- 150 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC-----------
Confidence 48999999998543211 111111 111 1 23346899999998765321
Q ss_pred CCCCCChHHHHHHHHHHHHHH--------cC--eeEEeeCceecCCCcHHHHHHHcCcc--cCCCCcccccccHHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILE--------FG--GCVLRLAGLYKADRGAHVYWLQKGTV--DSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~--------~~--~~IlRp~~iyG~~~~~~~~~l~~g~~--~~~~~~~~~~I~v~Dva~a 266 (272)
.+ ...|+.+|...|.+.+. .+ +..++||.++++...... +...... .........+...+|+|++
T Consensus 151 ~~--~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~p~~r~~~pedvA~~ 227 (257)
T 3imf_A 151 PG--VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKL-WISEEMAKRTIQSVPLGRLGTPEEIAGL 227 (257)
T ss_dssp TT--CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------CCSHHHHTTSTTCSCBCHHHHHHH
T ss_pred CC--cHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhc-ccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 11 25899999988866543 24 678999999987532111 0000000 0111122347889999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 228 v~~L~ 232 (257)
T 3imf_A 228 AYYLC 232 (257)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 87654
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=9.3e-12 Score=108.08 Aligned_cols=174 Identities=10% Similarity=-0.030 Sum_probs=108.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh--------hCCceeeccCc---c-----------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI--------NMGITPSLKWT---E----------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~--------~~~i~~~~~d~---~----------- 138 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++++.+.+. ...+..+.+|. +
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 88 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 34578999996 99999999999999 999999999876544322 12344444553 1
Q ss_pred ccCCCCEEEEecCCCCC-CC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRS-LD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~-~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
...++|+|||+|+.... .. +.+.+ +.++ +...+.+++|++||...+...
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 159 (267)
T 1iy8_A 89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI--------- 159 (267)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC---------
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC---------
Confidence 12379999999986432 11 11111 1111 123467899999998754321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCc-------ccCCCCcccccccH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGT-------VDSRPDHILNLIHY 260 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~-------~~~~~~~~~~~I~v 260 (272)
.+. ..|+.+|...|.+.+.+ + +.+++|+.++++...... ...... ..........+.+.
T Consensus 160 --~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~r~~~~ 234 (267)
T 1iy8_A 160 --GNQ--SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM-KQLDPENPRKAAEEFIQVNPSKRYGEA 234 (267)
T ss_dssp --SSB--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHH-HHHCTTCHHHHHHHHHTTCTTCSCBCH
T ss_pred --CCC--ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccc-cccChhhhhhHHHHHhccCCCCCCcCH
Confidence 112 58999999998877643 3 688999999875311100 000000 00011112347899
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|++++.++
T Consensus 235 ~dvA~~v~~l~ 245 (267)
T 1iy8_A 235 PEIAAVVAFLL 245 (267)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 99999988664
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.7e-11 Score=106.26 Aligned_cols=169 Identities=11% Similarity=-0.046 Sum_probs=107.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhC---CceeeccCc---c-----------cc
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM---GITPSLKWT---E-----------AT 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~---~i~~~~~d~---~-----------~~ 140 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+ ... .+..+..|. + ..
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARA--GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4478999996 99999999999999 99999999987665432 221 344444553 1 13
Q ss_pred CCCCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|++||+|+..... + +.+.+ +.++ +...+..++|++||...+-. +..
T Consensus 87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~----------~~~ 156 (262)
T 3pk0_A 87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT----------GYP 156 (262)
T ss_dssp SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB----------CCT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC----------CCC
Confidence 4899999999864321 1 11111 1111 12346789999999763210 011
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
+. ..|+.+|...|.+.+.+ + +..++|+.++++... .....+.+..+. ..+...+|+|++
T Consensus 157 ~~--~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~------~r~~~p~dva~~ 228 (262)
T 3pk0_A 157 GW--SHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPA------GALGTPEDIGHL 228 (262)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTT------SSCBCHHHHHHH
T ss_pred CC--hhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCC------CCCcCHHHHHHH
Confidence 12 68999999999877653 3 678999999876311 111122222221 236788999998
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 229 v~~L~ 233 (262)
T 3pk0_A 229 AAFLA 233 (262)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87654
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=8.6e-12 Score=107.63 Aligned_cols=170 Identities=12% Similarity=-0.010 Sum_probs=107.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c----c-------cCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E----A-------TQKF 143 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~----~-------~~~~ 143 (272)
+..++++|||+ |+||++++++|.++ |++|++++|++++...+.. ..+..+..|. + + ..++
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV 87 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence 34578999997 99999999999999 9999999998876654332 2344444543 1 1 2389
Q ss_pred CEEEEecCCCCCC-----------C---hHHHH-------HHHH------HHhc------CCCeEEEEecceeecCCCCC
Q 024143 144 PYVIFCAPPSRSL-----------D---YPGDV-------RLAA------LSWN------GEGSFLFTSSSAIYDCSDNG 190 (272)
Q Consensus 144 D~Vi~~a~~~~~~-----------~---~~~~~-------~~l~------~~~~------gvkr~V~~SS~~vYg~~~~~ 190 (272)
|+|||+|+..... . +.+.+ ..+. +... +.+++|++||...|...
T Consensus 88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--- 164 (265)
T 2o23_A 88 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ--- 164 (265)
T ss_dssp CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC---
T ss_pred CEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC---
Confidence 9999999864221 1 11111 1111 1122 56799999998876432
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHH----HHHcCcccCCCCccccc
Q 024143 191 ACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVY----WLQKGTVDSRPDHILNL 257 (272)
Q Consensus 191 ~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~----~l~~g~~~~~~~~~~~~ 257 (272)
.+. ..|+.+|...|.+.+.+ + +.+++|+.+..+....... .+.+..+. ...+
T Consensus 165 --------~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~ 229 (265)
T 2o23_A 165 --------VGQ--AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPF-----PSRL 229 (265)
T ss_dssp --------TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSS-----SCSC
T ss_pred --------CCC--chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCC-----cCCC
Confidence 112 58999999888776543 3 6889999998764321110 01111111 0247
Q ss_pred ccHHHHHHHHHHHh
Q 024143 258 IHYEVNTLVLFIAS 271 (272)
Q Consensus 258 I~v~Dva~ai~~a~ 271 (272)
++.+|+|++++.++
T Consensus 230 ~~~~dva~~~~~l~ 243 (265)
T 2o23_A 230 GDPAEYAHLVQAII 243 (265)
T ss_dssp BCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh
Confidence 89999999987653
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=9.1e-12 Score=107.46 Aligned_cols=172 Identities=10% Similarity=-0.036 Sum_probs=105.6
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------ccCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~~~ 143 (272)
+++||||+ |.||++++++|.++ |++|++++|++++.+.+. .. .+..+..|. + ...++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 67999996 99999999999999 999999999876544322 11 234444443 1 12489
Q ss_pred CEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
|+|||+|+...... +.+.+ +.++ +...+ .+++|++||...+... .+
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~- 148 (256)
T 1geg_A 81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-----------PE- 148 (256)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TT-
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC-----------CC-
Confidence 99999998643211 11111 1111 12334 6799999997654211 01
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHH-H-----cCcc---cCCCCcccccccHHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWL-Q-----KGTV---DSRPDHILNLIHYEVN 263 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l-~-----~g~~---~~~~~~~~~~I~v~Dv 263 (272)
...|+.+|...|.+.+.+ + +.++||+.++++........+ . .... .........+.+.+|+
T Consensus 149 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv 227 (256)
T 1geg_A 149 -LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDV 227 (256)
T ss_dssp -BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHH
T ss_pred -chhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHH
Confidence 158999999998877653 3 688999999875321110000 0 0000 0111112347899999
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
|++++.++
T Consensus 228 A~~v~~l~ 235 (256)
T 1geg_A 228 AACVSYLA 235 (256)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99987654
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.39 E-value=5.9e-12 Score=109.64 Aligned_cols=172 Identities=12% Similarity=-0.037 Sum_probs=105.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-chhhh----hhC--CceeeccCc---c-----------cc
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDEL----INM--GITPSLKWT---E-----------AT 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-~~~~l----~~~--~i~~~~~d~---~-----------~~ 140 (272)
..++|+|||+ |.||++++++|.++ |++|++++|+.. ..+.+ ... .+..+..|. + ..
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASM--GLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3478999996 99999999999999 999999999543 22222 222 344444443 1 12
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|+|||+|+...... +.+.+ +.++ ....+..++|++||...+... .
T Consensus 106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 174 (271)
T 4iin_A 106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN-----------M 174 (271)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------T
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC-----------C
Confidence 48999999999754321 11111 1111 123466899999998765321 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
+. ..|+.+|...|.+.+.+ + +..++||.+..+............ .........+.+.+|+|++++..
T Consensus 175 ~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~~~~p~dvA~~i~~l 250 (271)
T 4iin_A 175 GQ--TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKAD--YVKNIPLNRLGSAKEVAEAVAFL 250 (271)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHHHHHHHHHHH
T ss_pred Cc--hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHH--HHhcCCcCCCcCHHHHHHHHHHH
Confidence 22 68999999999877653 3 578999999876432211111110 11112234578899999998765
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 251 ~ 251 (271)
T 4iin_A 251 L 251 (271)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-11 Score=106.44 Aligned_cols=167 Identities=8% Similarity=-0.037 Sum_probs=106.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-cchhh----hhhC--CceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE----LINM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~~~----l~~~--~i~~~~~d~---~-----------~~~ 141 (272)
.+++||||+ |+||++++++|.++ |++|++++|.. ++.+. +... .+..+..|. + ...
T Consensus 4 ~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 4 TKSALVTGASRGIGRSIALQLAEE--GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp SCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999996 99999999999999 99999988753 33322 2222 233444443 1 124
Q ss_pred CCCEEEEecCCCCCC---C-----hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
++|++||+|+..... + +.+.+ ..+. +...+.+++|++||...+.... +
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 150 (246)
T 3osu_A 82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNP-----------G 150 (246)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------T
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC-----------C
Confidence 899999999864321 1 11111 1111 1234678999999987653211 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
. ..|+.+|...|.+.+.+ + +..++|+.++++... .....+..+.+ ...+.+.+|+|+++
T Consensus 151 ~--~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p------~~r~~~~~dva~~v 222 (246)
T 3osu_A 151 Q--ANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIP------LARFGQDTDIANTV 222 (246)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCT------TCSCBCHHHHHHHH
T ss_pred C--hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCC------CCCCcCHHHHHHHH
Confidence 2 68999999998877643 3 678999999987532 12222333222 23467889999998
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+..+
T Consensus 223 ~~l~ 226 (246)
T 3osu_A 223 AFLA 226 (246)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 7654
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.39 E-value=7.1e-12 Score=107.74 Aligned_cols=167 Identities=10% Similarity=-0.014 Sum_probs=103.8
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCcc-----------ccCCCCEEEEe
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFC 149 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~-----------~~~~~D~Vi~~ 149 (272)
+..++++|||+ |.||++++++|.++ |++|++++|++++.+.+. ++.....|.+ ...++|+|||+
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~--~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ 88 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSGAPKGLF--GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 88 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSCCCTTSE--EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHhc--CeeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 34578999996 99999999999999 999999999877654432 2222222321 13478999999
Q ss_pred cCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHH
Q 024143 150 APPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (272)
Q Consensus 150 a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (272)
|+..... + +.+.+ +.++ +...+.+++|++||...+... .+. ..|+.
T Consensus 89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y~~ 155 (247)
T 1uzm_A 89 AGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI-----------GNQ--ANYAA 155 (247)
T ss_dssp CSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CC--HHHHH
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC-----------CCC--hhHHH
Confidence 9864321 1 11111 1111 123567899999998654211 012 58999
Q ss_pred HHHHHHHHHHHc-------C--eeEEeeCceecCCCcH----HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 209 VLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 209 sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~----~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+|...|.+.+.+ + +.+++|+.+..+.... ....+... .....+++.+|+|++++.++
T Consensus 156 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~------~p~~~~~~~~dvA~~~~~l~ 225 (247)
T 1uzm_A 156 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQF------IPAKRVGTPAEVAGVVSFLA 225 (247)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGG------CTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhc------CCCCCCcCHHHHHHHHHHHc
Confidence 999888776643 3 6789999997542110 00111111 11234789999999987654
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.4e-11 Score=106.59 Aligned_cols=169 Identities=13% Similarity=0.098 Sum_probs=108.8
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------AT 140 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~ 140 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++++.+.+. .. .+..+..|. + ..
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 44578999996 99999999999999 999999999876554332 12 234444443 1 13
Q ss_pred CCCCEEEEecCCCCCC--C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSL--D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~--~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
.++|++||+|+..... + +.+.+ +.++ +...+..++|++||...+... .+
T Consensus 88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 156 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN-----------VR 156 (256)
T ss_dssp SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC-----------TT
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC-----------CC
Confidence 4899999999864321 1 11111 1111 123456899999998764321 11
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc-----HHHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-----AHVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~-----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
. ..|+.+|...|.+.+.+ + +..++||.+..+... .....+.+.. ....+.+.+|+|++
T Consensus 157 ~--~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~------p~~r~~~~~dva~~ 228 (256)
T 3gaf_A 157 M--ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHT------PLGRLGEAQDIANA 228 (256)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTC------TTSSCBCHHHHHHH
T ss_pred c--hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcC------CCCCCCCHHHHHHH
Confidence 2 68999999999877653 3 578999999865311 1111122222 22347889999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 229 ~~~L~ 233 (256)
T 3gaf_A 229 ALFLC 233 (256)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 87654
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.9e-12 Score=111.28 Aligned_cols=170 Identities=12% Similarity=0.062 Sum_probs=88.7
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----CC--ceeeccCc---c-----------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG--ITPSLKWT---E-----------AT 140 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~~--i~~~~~d~---~-----------~~ 140 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. .+ +..+.+|. + ..
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALARE--GAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34578999997 99999999999999 9999999998766544321 12 33444443 1 12
Q ss_pred CCCCEEEEecCCCC---C---C--C---hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSR---S---L--D---YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~---~---~--~---~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
.++|+|||+|+... . . + +.+.+ +.++ +...+.+++|++||...|..
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------- 154 (253)
T 3qiv_A 85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY---------- 154 (253)
T ss_dssp SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------
T ss_pred CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC----------
Confidence 48999999998631 0 0 1 11111 1111 12346789999999887621
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHH-HHHcCcccCCCCcccccccHHHHHHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVY-WLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~-~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
. ..|+.+|...|.+.+.+ + +..++|+.++++....... ...+ . .........+...+|+|++
T Consensus 155 ----~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~dva~~ 226 (253)
T 3qiv_A 155 ----S--NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVD-D-IVKGLPLSRMGTPDDLVGM 226 (253)
T ss_dssp -----------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------------------------------CCHHHHH
T ss_pred ----C--chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHH-H-HhccCCCCCCCCHHHHHHH
Confidence 1 46888999888776643 2 6789999999875321110 0000 0 1111222345678999998
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++.++
T Consensus 227 ~~~l~ 231 (253)
T 3qiv_A 227 CLFLL 231 (253)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 87654
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-11 Score=106.71 Aligned_cols=140 Identities=11% Similarity=-0.043 Sum_probs=92.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCC---CeEEEEecCCcchhhhhh-----CCceeeccCc---c----ccC----
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPG---CQIYGQTMTADHHDELIN-----MGITPSLKWT---E----ATQ---- 141 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g---~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~---~----~~~---- 141 (272)
..+++|||||+ |+||++++++|+++ | ++|++++|++++.+.+.. ..+..+..|. + .++
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~--G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 96 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNL--PQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTS--SSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhc--CCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence 56788999997 99999999999999 9 999999998776543322 1345555543 1 121
Q ss_pred -----CCCEEEEecCCCC-CCC--------hHHHH-------HHHH------HHhc------C-----CCeEEEEeccee
Q 024143 142 -----KFPYVIFCAPPSR-SLD--------YPGDV-------RLAA------LSWN------G-----EGSFLFTSSSAI 183 (272)
Q Consensus 142 -----~~D~Vi~~a~~~~-~~~--------~~~~~-------~~l~------~~~~------g-----vkr~V~~SS~~v 183 (272)
++|+|||+|+... ... +.+.+ ..+. .... + .+++|++||...
T Consensus 97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 176 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176 (267)
T ss_dssp HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence 6999999998644 111 11111 1111 0111 2 579999999887
Q ss_pred ecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 184 YDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 184 Yg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
|.... +..+. ..|+.+|...|.+.+.+ + ++++||+.+..+
T Consensus 177 ~~~~~--------~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 225 (267)
T 1sny_A 177 SIQGN--------TDGGM--YAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 225 (267)
T ss_dssp CSTTC--------CSCCC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred cccCC--------CCCCc--hHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecC
Confidence 64321 11122 58999999999877653 3 688999998654
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.1e-11 Score=107.52 Aligned_cols=168 Identities=14% Similarity=-0.014 Sum_probs=104.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch-hhhhhCCceeeccCc---c-----------ccCCCCEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELINMGITPSLKWT---E-----------ATQKFPYV 146 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~-~~l~~~~i~~~~~d~---~-----------~~~~~D~V 146 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++. +.+...++..+..|. + ...++|+|
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 103 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEH--GHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAV 103 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 3468999996 99999999999999 99999999987653 333344566655553 1 13479999
Q ss_pred EEecCCCCCC--C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 147 IFCAPPSRSL--D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 147 i~~a~~~~~~--~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
||+|+..... + +.+.+ +.++ +...+..++|++||...+... .+. ..|
T Consensus 104 v~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y 170 (260)
T 3gem_A 104 VHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS-----------SKH--IAY 170 (260)
T ss_dssp EECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC-----------SSC--HHH
T ss_pred EECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC-----------CCc--HhH
Confidence 9999964321 1 11111 0111 123456899999998765321 112 589
Q ss_pred HHHHHHHHHHHHHc----C----eeEEeeCceecCCCcH--HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 207 TDVLLKAEKVILEF----G----GCVLRLAGLYKADRGA--HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 207 ~~sk~~aE~~l~~~----~----~~IlRp~~iyG~~~~~--~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|...|.+.+.+ + +..++||.+..+.... ....+....+ ..-+...+|+|++++.++
T Consensus 171 ~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p------~~r~~~~edva~~v~~L~ 239 (260)
T 3gem_A 171 CATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAYRANALAKSA------LGIEPGAEVIYQSLRYLL 239 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---------------CC------SCCCCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHHHHHHHhcCC------CCCCCCHHHHHHHHHHHh
Confidence 99999999877654 2 5789999998764221 1111111111 122456799999887653
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-11 Score=105.87 Aligned_cols=167 Identities=8% Similarity=-0.032 Sum_probs=106.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec-CCcchhhh----hhC--CceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~~~l----~~~--~i~~~~~d~---~-----------~~~ 141 (272)
.++++|||+ |.||++++++|.++ |++|++++| ++++.+.+ ... .+..+..|. + ...
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 4 GKVALVTGASRGIGRAIAIDLAKQ--GANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999996 99999999999999 999999999 65544332 111 244444443 1 124
Q ss_pred CCCEEEEecCCCCCCC--------hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
++|++||+|+...... +.+. ++.++ +...+.+++|++||...+... | +
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~ 150 (246)
T 2uvd_A 82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN---------P--G 150 (246)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------T--T
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC---------C--C
Confidence 7999999998643211 1111 11111 123467899999998754321 0 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
. ..|+.+|...+.+.+.+ + +.+++|+.+..+... .....+....+ ...+++.+|+|+++
T Consensus 151 ~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p------~~~~~~~~dvA~~~ 222 (246)
T 2uvd_A 151 Q--ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIP------AAQFGEAQDIANAV 222 (246)
T ss_dssp B--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCT------TCSCBCHHHHHHHH
T ss_pred C--chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCC------CCCCcCHHHHHHHH
Confidence 2 58999999888776542 3 688999999876321 11111221111 22478999999998
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 223 ~~l~ 226 (246)
T 2uvd_A 223 TFFA 226 (246)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 7654
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=4.3e-12 Score=110.99 Aligned_cols=174 Identities=9% Similarity=-0.050 Sum_probs=106.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhC--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~--~i~~~~~d~---~-----------~~~ 141 (272)
..+++||||+ |+||++++++|.++ |++|++++|++++.+.+ ... .+..+.+|. + ...
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 3468999996 99999999999999 99999999987654432 211 244444443 1 134
Q ss_pred CCCEEEEecCCCCCCC--------hHHHHH-------HHHH--------HhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDVR-------LAAL--------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~~-------~l~~--------~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
++|+|||+|+...... +.+.+. .+.. ...+.+++|++||...+...
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------- 167 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV----------- 167 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC-----------
Confidence 7999999998643211 111110 1110 11246799999998654211
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHc------Ccc---cCCCCcccccccH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQK------GTV---DSRPDHILNLIHY 260 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~------g~~---~~~~~~~~~~I~v 260 (272)
.+. ..|+.+|...|.+.+.+ + +.++||+.++++........... ... .........+++.
T Consensus 168 ~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~ 245 (277)
T 2rhc_B 168 VHA--APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP 245 (277)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCH
T ss_pred CCC--ccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCH
Confidence 112 58999999998877653 2 68899999987632211100000 000 0011122358899
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|++++.++
T Consensus 246 ~dvA~~v~~l~ 256 (277)
T 2rhc_B 246 SEVAEMVAYLI 256 (277)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988664
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.38 E-value=8.5e-12 Score=107.90 Aligned_cols=174 Identities=10% Similarity=-0.013 Sum_probs=105.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhhhhh------CCceeeccCc---c-----------cc
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELIN------MGITPSLKWT---E-----------AT 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~l~~------~~i~~~~~d~---~-----------~~ 140 (272)
.|++++|||+ |.||++++++|.++ |++|+++.|+... .+.+.. ..+..+..|. + ..
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 83 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAK--GYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF 83 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4678999996 99999999999999 9999999776433 222111 1244444553 1 12
Q ss_pred CCCCEEEEecCC--CCCCC--------hHHHHH-------HHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPP--SRSLD--------YPGDVR-------LAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 141 ~~~D~Vi~~a~~--~~~~~--------~~~~~~-------~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
.++|+|||+|+. ..... +.+.+. .+. ....+..++|++||.+.++...
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~--------- 154 (264)
T 3i4f_A 84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPG--------- 154 (264)
T ss_dssp SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCC---------
T ss_pred CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCC---------
Confidence 489999999993 21111 111111 111 1344678999999986543211
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
..+. ..|+.+|...|.+.+.+ + +.+++|+.++++............. ........+.+.+|+|++++
T Consensus 155 ~~~~--~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~p~~r~~~~~dva~~v~ 230 (264)
T 3i4f_A 155 WIYR--SAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLK--EHNTPIGRSGTGEDIARTIS 230 (264)
T ss_dssp CTTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC----------CCCCHHHHHHHHH
T ss_pred CCCC--chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHH--hhcCCCCCCcCHHHHHHHHH
Confidence 1122 68999999998877643 3 6789999999875322111111110 11112234678999999988
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 231 ~l~ 233 (264)
T 3i4f_A 231 FLC 233 (264)
T ss_dssp HHH
T ss_pred HHc
Confidence 664
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.5e-11 Score=107.25 Aligned_cols=169 Identities=11% Similarity=-0.026 Sum_probs=107.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C---CceeeccCc---c-----------cc
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M---GITPSLKWT---E-----------AT 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~---~i~~~~~d~---~-----------~~ 140 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. . .+..+.+|. + ..
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARA--GANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 4468999996 99999999999999 9999999999876554321 1 244444543 1 23
Q ss_pred CCCCEEEEecCCCCCC---C-----hHHHHH-------HHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSL---D-----YPGDVR-------LAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~~~~-------~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
..+|+|||+|+..... + +.+.+. .+. +...+..++|++||...+... ..
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~----------~~ 187 (293)
T 3rih_A 118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTG----------YP 187 (293)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBB----------CT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCC----------CC
Confidence 4789999999864321 1 111111 111 124467899999997642100 01
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
+. ..|+.+|...|.+.+.+ + +.+++||.++++... .....+.+..+. .-+...+|+|++
T Consensus 188 ~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~------~r~~~p~dvA~~ 259 (293)
T 3rih_A 188 GW--SHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPM------GMLGSPVDIGHL 259 (293)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTT------SSCBCHHHHHHH
T ss_pred CC--HHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCC------CCCCCHHHHHHH
Confidence 12 68999999999877643 3 678999999986421 111122222221 225678999998
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 260 v~fL~ 264 (293)
T 3rih_A 260 AAFLA 264 (293)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77654
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.37 E-value=9.7e-12 Score=108.41 Aligned_cols=172 Identities=8% Similarity=-0.026 Sum_probs=107.1
Q ss_pred CcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------ccCCCCE
Q 024143 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 81 ~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~~~~D~ 145 (272)
....++|||||+ |.||++++++|.++ |++|++++|+++.... ....+..|. + ...++|+
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 84 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRY--GAKVVSVSLDEKSDVN----VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI 84 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCC--CTT----SSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchhccC----ceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 355689999997 99999999999999 9999999998765422 233333332 1 2348999
Q ss_pred EEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 146 VIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
|||+|+...... +.+.+ +.++ +...+.+++|++||...|... .+. .
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~ 151 (269)
T 3vtz_A 85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT-----------KNA--A 151 (269)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-----------TTC--H
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-----------CCC--h
Confidence 999999643221 11111 1111 123467899999998876431 112 5
Q ss_pred hHHHHHHHHHHHHHHc------C--eeEEeeCceecCCCcHHHHHHH-cC--------cccCCCCcccccccHHHHHHHH
Q 024143 205 PRTDVLLKAEKVILEF------G--GCVLRLAGLYKADRGAHVYWLQ-KG--------TVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~------~--~~IlRp~~iyG~~~~~~~~~l~-~g--------~~~~~~~~~~~~I~v~Dva~ai 267 (272)
.|+.+|...|.+.+.+ + +..++||.++.+.......... .. ..+........+.+.+|+|+++
T Consensus 152 ~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v 231 (269)
T 3vtz_A 152 AYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVV 231 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 8999999999887653 2 5789999998653211100000 00 0001112234478899999998
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+..+
T Consensus 232 ~~L~ 235 (269)
T 3vtz_A 232 AFLA 235 (269)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.7e-12 Score=111.79 Aligned_cols=172 Identities=11% Similarity=-0.011 Sum_probs=106.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCcc-----------ccCCCCEEEEec
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFCA 150 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~-----------~~~~~D~Vi~~a 150 (272)
..+++||||+ |.||++++++|.++ |++|++++|+.+...... .+.....|.+ ...++|++||+|
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~--~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnA 102 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAA--GARVAVADRAVAGIAADL--HLPGDLREAAYADGLPGAVAAGLGRLDIVVNNA 102 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEECSSCCTTSCCSE--ECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHhhh--ccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 3478999996 99999999999999 999999999866543221 1111122211 234899999999
Q ss_pred CCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHH
Q 024143 151 PPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (272)
Q Consensus 151 ~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~s 209 (272)
+...... +.+.+ +.++ +...+.+++|++||...|... .+. ..|+.+
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y~as 169 (266)
T 3uxy_A 103 GVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPG-----------PGH--ALYCLT 169 (266)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCC-----------TTB--HHHHHH
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC-----------CCC--hHHHHH
Confidence 9754211 11111 1111 123467899999998765321 122 589999
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcC-----cccCCCCcccccccHHHHHHHHHHHh
Q 024143 210 LLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKG-----TVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g-----~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|...|.+.+.+ + +.+++||.++++............ ...........+.+.+|+|++++.++
T Consensus 170 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~ 245 (266)
T 3uxy_A 170 KAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLA 245 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 99999877653 3 678999999875321110000000 00112223345789999999987654
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=8.1e-12 Score=109.26 Aligned_cols=171 Identities=12% Similarity=0.019 Sum_probs=107.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC-----CceeeccCc---c-----------
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM-----GITPSLKWT---E----------- 138 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~-----~i~~~~~d~---~----------- 138 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+. .. .+..+.+|. +
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 3468999996 99999999999999 999999999876554332 11 244444553 1
Q ss_pred ccCCCCEEEEecCCCCCC-------C-----hHHHH-------HHH----H--HHhcCCCeEEEEecceeecCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRSL-------D-----YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACD 193 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~-------~-----~~~~~-------~~l----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~ 193 (272)
...++|+|||+|+..... + +.+.+ ..+ + ....+ +++|++||...+...
T Consensus 83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------ 155 (280)
T 1xkq_A 83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA------ 155 (280)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC------
T ss_pred hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC------
Confidence 123799999999854211 1 11111 011 1 11234 899999998765321
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH----------HHHHHcCcccCCCCcc
Q 024143 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----------VYWLQKGTVDSRPDHI 254 (272)
Q Consensus 194 E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~----------~~~l~~g~~~~~~~~~ 254 (272)
..+ ...|+.+|...|.+.+.+ + +.+++|+.++++..... ...... .......
T Consensus 156 ----~~~--~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~ 226 (280)
T 1xkq_A 156 ----QPD--FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMAS---HKECIPI 226 (280)
T ss_dssp ----CCS--SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH---CTTTCTT
T ss_pred ----CCc--ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHH---HHcCCCC
Confidence 011 258999999998877653 3 68899999998742110 001111 0111122
Q ss_pred cccccHHHHHHHHHHHh
Q 024143 255 LNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 255 ~~~I~v~Dva~ai~~a~ 271 (272)
..+.+.+|+|++++.++
T Consensus 227 ~~~~~pedvA~~v~~l~ 243 (280)
T 1xkq_A 227 GAAGKPEHIANIILFLA 243 (280)
T ss_dssp SSCBCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhc
Confidence 34789999999987654
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=5.9e-12 Score=108.60 Aligned_cols=173 Identities=12% Similarity=-0.009 Sum_probs=105.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCcc-----------ccCCCCEEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWTE-----------ATQKFPYVIF 148 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~~-----------~~~~~D~Vi~ 148 (272)
|+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. .+.+....|.+ ...++|+|||
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~ 78 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVS 78 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred CeEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEE
Confidence 578999996 99999999999999 9999999998776544321 12111111321 2348999999
Q ss_pred ecCCC-CCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 149 CAPPS-RSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 149 ~a~~~-~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
+|+.. .... +.+.+ +.++ +...+.+++|++||...+... .+. ..|
T Consensus 79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y 145 (254)
T 1zmt_A 79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW-----------KEL--STY 145 (254)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC-----------TTC--HHH
T ss_pred CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC-----------CCc--hHH
Confidence 99865 2211 11111 1111 123467899999998754321 112 589
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH-HHHHHcCcc-----cCCCCcccccccHHHHHHHHHHHh
Q 024143 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH-VYWLQKGTV-----DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 207 ~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~-~~~l~~g~~-----~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|...|.+.+.+ + +.+++|+.++|+....+ ...+..... .........+.+.+|+|++++.++
T Consensus 146 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~ 225 (254)
T 1zmt_A 146 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLA 225 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHh
Confidence 99999998776643 3 68899999988752110 000001000 000011123678999999987664
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=8.5e-12 Score=110.03 Aligned_cols=172 Identities=8% Similarity=-0.043 Sum_probs=105.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h-------CCceeeccCc---c----c---
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N-------MGITPSLKWT---E----A--- 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~-------~~i~~~~~d~---~----~--- 139 (272)
+..++|+|||+ |+||++++++|.++ |++|++++|++++...+. . ..+..+.+|. + .
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence 34578999996 99999999999999 999999999876543321 1 1344444553 1 1
Q ss_pred ----cCCCCEEEEecCCCCCCC--------hHHHH-------HHHHH------HhcCCCeEEEEecceeecCCCCCCCCC
Q 024143 140 ----TQKFPYVIFCAPPSRSLD--------YPGDV-------RLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDE 194 (272)
Q Consensus 140 ----~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~~------~~~gvkr~V~~SS~~vYg~~~~~~~~E 194 (272)
..++|+|||+|+...... +.+.+ ..++. ...+.+++|++||.. +...
T Consensus 94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~------- 165 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGF------- 165 (303)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCC-------
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCC-------
Confidence 236999999998533211 11111 11110 112357899999987 2210
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCC--cHH--HHHHHcCcccCCCCcccccccHH
Q 024143 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADR--GAH--VYWLQKGTVDSRPDHILNLIHYE 261 (272)
Q Consensus 195 ~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~--~~~--~~~l~~g~~~~~~~~~~~~I~v~ 261 (272)
+ +. ..|+.+|...+.+.+.+ + ++++||+.++++.. ... ...... ... .......+++.+
T Consensus 166 --~--~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~-~~~p~~~~~~~~ 237 (303)
T 1yxm_A 166 --P--LA--VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFE-GSF-QKIPAKRIGVPE 237 (303)
T ss_dssp --T--TC--HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGT-TGG-GGSTTSSCBCTH
T ss_pred --C--cc--hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHH-HHH-hcCcccCCCCHH
Confidence 1 11 57999998888766542 3 68999999999831 110 000000 010 011123478999
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++.++
T Consensus 238 dvA~~i~~l~ 247 (303)
T 1yxm_A 238 EVSSVVCFLL 247 (303)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988664
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.37 E-value=8.3e-12 Score=110.58 Aligned_cols=174 Identities=10% Similarity=-0.069 Sum_probs=105.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~ 141 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++...+. .. .+..+..|. + ...
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARR--GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 3468999997 99999999999999 999999999877654432 22 344444553 1 124
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
++|+|||+|+...... +.+.+ +.++ ....+ ..++|++||...+... .
T Consensus 108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 176 (301)
T 3tjr_A 108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN-----------A 176 (301)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC-----------T
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC-----------C
Confidence 8999999999653211 11111 1111 12233 5799999998765321 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHH-----HHcCcc---cCCCCcccccccHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYW-----LQKGTV---DSRPDHILNLIHYEV 262 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~-----l~~g~~---~~~~~~~~~~I~v~D 262 (272)
+ ...|+.+|...|.+.+.+ + +.+++||.+..+-....... .....+ .+.......+++.+|
T Consensus 177 ~--~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ped 254 (301)
T 3tjr_A 177 G--LGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADD 254 (301)
T ss_dssp T--BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHH
T ss_pred C--chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHH
Confidence 1 258999999888776543 3 67899999876532111000 000011 112233456899999
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|++++.++
T Consensus 255 vA~~i~~~l 263 (301)
T 3tjr_A 255 VARLTADAI 263 (301)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998875
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=2.7e-11 Score=105.50 Aligned_cols=168 Identities=8% Similarity=-0.132 Sum_probs=104.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec-CCcchhhhh-------hCCceeeccC---c----c---------
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELI-------NMGITPSLKW---T----E--------- 138 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~~~l~-------~~~i~~~~~d---~----~--------- 138 (272)
.+++||||+ |+||++++++|.++ |++|++++| ++++.+.+. ...+..+.+| . +
T Consensus 11 ~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 11 CPAAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence 468999996 99999999999999 999999999 765544322 1123333333 2 2
Q ss_pred --ccCCCCEEEEecCCCCCCC---h-H-----------HHHHH-----------HH---HHh--cCC------CeEEEEe
Q 024143 139 --ATQKFPYVIFCAPPSRSLD---Y-P-----------GDVRL-----------AA---LSW--NGE------GSFLFTS 179 (272)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~~~---~-~-----------~~~~~-----------l~---~~~--~gv------kr~V~~S 179 (272)
...++|+|||+|+...... . . +..+. +. ... .+. +++|++|
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~is 168 (276)
T 1mxh_A 89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC 168 (276)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEC
Confidence 1237999999998532210 0 0 11111 11 011 334 7999999
Q ss_pred cceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc--HHHHHHHcCccc
Q 024143 180 SSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG--AHVYWLQKGTVD 248 (272)
Q Consensus 180 S~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~--~~~~~l~~g~~~ 248 (272)
|...|... .+. ..|+.+|...|.+.+.+ + +.+++|+.++++... .....+.+..+.
T Consensus 169 S~~~~~~~-----------~~~--~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~p~ 235 (276)
T 1mxh_A 169 DAMTDLPL-----------PGF--CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPL 235 (276)
T ss_dssp CGGGGSCC-----------TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTCTT
T ss_pred chhhcCCC-----------CCC--eehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCCccCCHHHHHHHHhcCCC
Confidence 98765321 112 58999999998877643 3 688999999998211 111122222211
Q ss_pred CCCCcccccccHHHHHHHHHHHh
Q 024143 249 SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 249 ~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+.+++.+|+|++++.++
T Consensus 236 -----~r~~~~~~dva~~v~~l~ 253 (276)
T 1mxh_A 236 -----GQSEASAAQIADAIAFLV 253 (276)
T ss_dssp -----TSCCBCHHHHHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHHh
Confidence 122789999999988764
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.7e-11 Score=106.17 Aligned_cols=173 Identities=9% Similarity=-0.062 Sum_probs=105.9
Q ss_pred cCCCeEEEEcC-cH-HHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h---CCceeeccCc---c-----------
Q 024143 82 VGENDLLIVGP-GV-LGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N---MGITPSLKWT---E----------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-Gf-iG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~---~~i~~~~~d~---~----------- 138 (272)
+..+++||||+ |+ ||++++++|.++ |++|++++|+.++...+. . ..+..+..|. +
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 34578999997 86 999999999999 999999999876544322 1 1344555553 1
Q ss_pred ccCCCCEEEEecCCCCCCC--------hHHHHH-------HH----H--HHhc-CCCeEEEEecceeecCCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRSLD--------YPGDVR-------LA----A--LSWN-GEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~~--------~~~~~~-------~l----~--~~~~-gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
....+|+|||+|+...... +.+.+. .+ + .... +..++|++||...+...
T Consensus 98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 168 (266)
T 3o38_A 98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ--------- 168 (266)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC---------
T ss_pred HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC---------
Confidence 1347899999999643221 111111 11 1 1122 56789999997754221
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHH-HHHcCcccCCCCcccccccHHHHHHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVY-WLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~-~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
.+. ..|+.+|...|.+.+.+ + +..++|+.+..+....... ... ...........+.+.+|+|++
T Consensus 169 --~~~--~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~~~r~~~~~dva~~ 242 (266)
T 3o38_A 169 --HSQ--SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELL--DRLASDEAFGRAAEPWEVAAT 242 (266)
T ss_dssp --TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------CCTTSSCCCHHHHHHH
T ss_pred --CCC--chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHH--HHHHhcCCcCCCCCHHHHHHH
Confidence 122 68999999999877643 3 6789999998764221100 000 001122233457899999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 243 i~~l~ 247 (266)
T 3o38_A 243 IAFLA 247 (266)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 87664
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.36 E-value=4.2e-12 Score=111.24 Aligned_cols=172 Identities=10% Similarity=0.023 Sum_probs=108.4
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~ 143 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++++...+.. ..+..+..|. + ...++
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKN--GAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV 102 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 34578999996 99999999999999 9999999998776554432 2334444443 1 13489
Q ss_pred CEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
|+|||+|+..... + +.+.+ +.++ +...+..++|++||...|... .+.
T Consensus 103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~- 170 (277)
T 4dqx_A 103 DVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI-----------ADR- 170 (277)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC-----------TTB-
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC-----------CCC-
Confidence 9999999964321 1 11111 1111 123456799999998765321 112
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcC-cc------cCCCCcccccccHHHHHHH
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKG-TV------DSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g-~~------~~~~~~~~~~I~v~Dva~a 266 (272)
..|+.+|...|.+.+.+ + +..++||.+..+.. ....... .. .........+.+.+|+|++
T Consensus 171 -~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~ 246 (277)
T 4dqx_A 171 -TAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYF---TKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEA 246 (277)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH---HHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHH
T ss_pred -hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchh---hhhcccccchhHHHHHHHhcCcccCCcCHHHHHHH
Confidence 68999999999877653 3 57899999976431 1011100 00 1111223347789999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 247 v~~L~ 251 (277)
T 4dqx_A 247 MLFLA 251 (277)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87654
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=3.9e-12 Score=110.20 Aligned_cols=167 Identities=10% Similarity=-0.018 Sum_probs=106.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE-ecCCcchhhhh----hC--CceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELI----NM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~-~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~ 141 (272)
.+++||||+ |.||++++++|.++ |++|+++ .|++++...+. .. .+..+..|. + ...
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~--G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAEN--GYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEecCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 368999996 99999999999999 9999987 77765543322 12 344444443 1 234
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
++|++||+|+...... +.+.+ +.++ +...+..++|++||...+... .+
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~ 150 (258)
T 3oid_A 82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYL-----------EN 150 (258)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBC-----------TT
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCC-----------CC
Confidence 7899999998543211 11111 1111 123456799999998765321 12
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
. ..|+.+|...|.+.+.+ + +..++||.+..+.... ....+.... ....+.+.+|+|+
T Consensus 151 ~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~------p~~r~~~~~dva~ 222 (258)
T 3oid_A 151 Y--TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNT------PAGRMVEIKDMVD 222 (258)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHC------TTSSCBCHHHHHH
T ss_pred c--HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcC------CCCCCcCHHHHHH
Confidence 2 68999999999877653 2 5789999998763211 111122211 1234788999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++..+
T Consensus 223 ~v~~L~ 228 (258)
T 3oid_A 223 TVEFLV 228 (258)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 987654
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=2.3e-12 Score=110.99 Aligned_cols=174 Identities=9% Similarity=-0.051 Sum_probs=103.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCe-EEEEecCCc--chhhhhhC----CceeeccCc----c-----------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTAD--HHDELINM----GITPSLKWT----E-----------A 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~-V~~~~R~~~--~~~~l~~~----~i~~~~~d~----~-----------~ 139 (272)
..++++|||+ |+||++++++|.++ |++ |++++|+++ ..+.+... .+..+..|. + .
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~--G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC--CCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence 3478999996 99999999999999 997 999999763 23333221 233343432 1 1
Q ss_pred cCCCCEEEEecCCCCCCChHHHH-------HHH----HH--HhcC---CCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLDYPGDV-------RLA----AL--SWNG---EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~~~~~~-------~~l----~~--~~~g---vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
..++|+|||+|+....+++.+.+ ..+ +. ...+ ..++|++||...|... .+.
T Consensus 82 ~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~-- 148 (254)
T 1sby_A 82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-----------HQV-- 148 (254)
T ss_dssp HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TTS--
T ss_pred cCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC-----------CCc--
Confidence 23799999999975444332211 111 10 1111 4689999998875321 112
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..|+.+|...|.+.+.+ + +.+++|+.+.++.......+...............+.+.+|+|++++.++
T Consensus 149 ~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~~~ 225 (254)
T 1sby_A 149 PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAI 225 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 58999999999877653 3 67899999987521000000000000000000112458999999988764
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.4e-11 Score=103.07 Aligned_cols=163 Identities=13% Similarity=0.004 Sum_probs=98.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---CceeeccCc---c--------ccCCCCEEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT---E--------ATQKFPYVIF 148 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~i~~~~~d~---~--------~~~~~D~Vi~ 148 (272)
|+++||||+ |.||++++++|.++ |++|++++|++++.+.+... .+.....|. + .....|+|||
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAE--GKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred CCEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence 678999997 99999999999999 99999999998776554332 334444443 1 1233499999
Q ss_pred ecCCCCCCC--------hHHHHH-------HHH----HH-hcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHH
Q 024143 149 CAPPSRSLD--------YPGDVR-------LAA----LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (272)
Q Consensus 149 ~a~~~~~~~--------~~~~~~-------~l~----~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (272)
+|+...... +.+.+. .+. .. .....++|++||...+... .+. ..|+.
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~--~~Y~a 145 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPK-----------AQE--STYCA 145 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCC-----------TTC--HHHHH
T ss_pred eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCC-----------CCC--chhHH
Confidence 998643221 111111 111 01 1122399999998765321 112 68999
Q ss_pred HHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 209 VLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 209 sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+|...+.+.+.+ + +..++||.+..+-... ... ......++..+|+|++++.++
T Consensus 146 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----~~~------~~~~~~~~~~~dvA~~i~~l~ 207 (230)
T 3guy_A 146 VKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET----SGK------SLDTSSFMSAEDAALMIHGAL 207 (230)
T ss_dssp HHHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------------CCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh----cCC------CCCcccCCCHHHHHHHHHHHH
Confidence 999999877653 2 5778999887543211 111 112345788999999988765
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.35 E-value=2.2e-11 Score=106.68 Aligned_cols=174 Identities=11% Similarity=-0.021 Sum_probs=106.1
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhC--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~--~i~~~~~d~---~-----------~~~ 141 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+ ... .+..+..|. + ...
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3468999996 99999999999999 99999999987665432 222 234444443 1 134
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-----------HHHH----HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA----LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~----~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.+|+|||+|+...... +.+.+ +.++ +...+..++|++||...+...
T Consensus 101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~----------- 169 (279)
T 3sju_A 101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV----------- 169 (279)
T ss_dssp SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC-----------
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC-----------
Confidence 7999999999654221 11111 1111 112456799999998764321
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHc--C----c---ccCCCCcccccccH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQK--G----T---VDSRPDHILNLIHY 260 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~--g----~---~~~~~~~~~~~I~v 260 (272)
.+. ..|+.+|...|.+.+.+ + +..++||.+..+........... + . ..........+...
T Consensus 170 ~~~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 247 (279)
T 3sju_A 170 MYA--APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTP 247 (279)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCH
T ss_pred CCC--hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCH
Confidence 112 58999999888877643 2 57899999976431111000000 0 0 00112223447889
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|++++..+
T Consensus 248 edvA~~v~~L~ 258 (279)
T 3sju_A 248 EEVAGLVGYLV 258 (279)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999987654
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.8e-11 Score=106.57 Aligned_cols=168 Identities=9% Similarity=-0.035 Sum_probs=104.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D 144 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + ...++|
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQ--GAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID 103 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 4478999996 99999999999999 9999999998776554422 2344444443 1 134899
Q ss_pred EEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
+|||+|+..... + +.+.+ +.++ +...+..++|++||...+... .+.
T Consensus 104 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~~~-- 170 (266)
T 3grp_A 104 ILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN-----------PGQ-- 170 (266)
T ss_dssp EEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------CH--
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC-----------CCc--
Confidence 999999964321 1 11111 1111 123467899999998755321 012
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
..|+.+|...|.+.+.+ + +..++|+.+..+... .....+.+.. ....+.+.+|+|++++..
T Consensus 171 ~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~------p~~r~~~~edvA~~v~~L 244 (266)
T 3grp_A 171 TNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMI------PMKRMGIGEEIAFATVYL 244 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTC------TTCSCBCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcC------CCCCCcCHHHHHHHHHHH
Confidence 58999999888776643 3 578999999865211 1111222222 223467899999998765
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 245 ~ 245 (266)
T 3grp_A 245 A 245 (266)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.1e-11 Score=108.10 Aligned_cols=170 Identities=11% Similarity=-0.046 Sum_probs=107.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh------CCceeeccCc---c----c-------cC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E----A-------TQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~------~~i~~~~~d~---~----~-------~~ 141 (272)
..+++||||+ |+||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + . ..
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 110 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQA--GADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG 110 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHH--TCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 3468999996 99999999999999 9999999998766543321 1344444553 1 1 23
Q ss_pred CCCEEEEecCCCCC----C-C-----hHHH-----------HHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS----L-D-----YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~----~-~-----~~~~-----------~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.+|+|||+|+.... . + +.+. ++.++ ....+.+++|++||...+... +.
T Consensus 111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~ 181 (279)
T 3ctm_A 111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN---------IP 181 (279)
T ss_dssp CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------
T ss_pred CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC---------CC
Confidence 69999999985322 1 1 1111 11222 123568899999998754210 01
Q ss_pred CCCCCChHHHHHHHHHHHHHHcC--------eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~~--------~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
.+. ..|+.+|...|.+++.+. +.+++|+.+..+... .....+....+ ...+++.+|+|++
T Consensus 182 ~~~--~~Y~~sK~a~~~~~~~la~e~~~~~~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p------~~~~~~~~dvA~~ 253 (279)
T 3ctm_A 182 QLQ--APYNTAKAACTHLAKSLAIEWAPFARVNTISPGYIDTDITDFASKDMKAKWWQLTP------LGREGLTQELVGG 253 (279)
T ss_dssp CCH--HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECSBSSTTTSSCCHHHHHHHHHHST------TCSCBCGGGTHHH
T ss_pred CCc--ccHHHHHHHHHHHHHHHHHHhcccCCEEEEeccCCccccccccChHHHHHHHHhCC------ccCCcCHHHHHHH
Confidence 122 589999999998876531 578999999876421 11111111111 1237889999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++.++
T Consensus 254 ~~~l~ 258 (279)
T 3ctm_A 254 YLYLA 258 (279)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87664
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.35 E-value=2.1e-11 Score=105.66 Aligned_cols=164 Identities=10% Similarity=-0.017 Sum_probs=101.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~ 141 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++...+. .. .+..+..|. + ...
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSL--GARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 3468999996 99999999999999 999999999876654432 12 234444443 1 134
Q ss_pred CCCEEEEecCCCC-CCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSR-SLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~-~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.+|+|||+|+... ... +.+.+ +.++ +...+.+++|++||...+... .
T Consensus 106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 174 (262)
T 3rkr_A 106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV-----------A 174 (262)
T ss_dssp CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCC-----------T
T ss_pred CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC-----------C
Confidence 7999999999622 111 11111 1111 123467899999998765321 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
+. ..|+.+|...|.+.+.+ + +.+++||.+..+-.... .. ......++..+|+|++++..
T Consensus 175 ~~--~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~------~~~~~~~~~p~dvA~~v~~l 242 (262)
T 3rkr_A 175 DG--AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL----SA------KKSALGAIEPDDIADVVALL 242 (262)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------CCCHHHHHHHHHHH
T ss_pred CC--chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc----cc------ccccccCCCHHHHHHHHHHH
Confidence 22 68999999998876643 3 67899999875432111 11 11223467899999998765
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 243 ~ 243 (262)
T 3rkr_A 243 A 243 (262)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=1.6e-11 Score=108.63 Aligned_cols=170 Identities=13% Similarity=0.029 Sum_probs=106.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC-----CceeeccCc---c-----------c
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM-----GITPSLKWT---E-----------A 139 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~-----~i~~~~~d~---~-----------~ 139 (272)
.+++||||+ |.||++++++|.++ |++|++++|++++.+.+. .. .+..+..|. + .
T Consensus 26 ~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 26 GKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 467999996 99999999999999 999999999876554332 11 244444543 1 1
Q ss_pred cCCCCEEEEecCCCCCCC----------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD----------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~----------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
..++|+|||+|+...... +.+.+ +.++ ....+ +++|++||...+...
T Consensus 104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~--------- 173 (297)
T 1xhl_A 104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA--------- 173 (297)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC---------
T ss_pred cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC---------
Confidence 247999999998543211 11111 1111 12334 899999998765321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH----------HHHHHcCcccCCCCccccc
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----------VYWLQKGTVDSRPDHILNL 257 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~----------~~~l~~g~~~~~~~~~~~~ 257 (272)
..+ ...|+.+|...|.+.+.+ + +.++||+.++++..... ...... .........+
T Consensus 174 -~~~--~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~r~ 247 (297)
T 1xhl_A 174 -HSG--YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGS---RKECIPVGHC 247 (297)
T ss_dssp -CTT--SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH---CTTTCTTSSC
T ss_pred -CCC--cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHH---HHhcCCCCCC
Confidence 011 258999999998876643 3 68899999987632110 000111 0111122347
Q ss_pred ccHHHHHHHHHHHh
Q 024143 258 IHYEVNTLVLFIAS 271 (272)
Q Consensus 258 I~v~Dva~ai~~a~ 271 (272)
...+|+|++++.++
T Consensus 248 ~~pedvA~~v~~l~ 261 (297)
T 1xhl_A 248 GKPEEIANIIVFLA 261 (297)
T ss_dssp BCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHh
Confidence 89999999987664
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.35 E-value=3e-11 Score=105.64 Aligned_cols=175 Identities=13% Similarity=0.041 Sum_probs=107.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC-------------Ccchhhh----hhC--CceeeccCc---c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-------------ADHHDEL----INM--GITPSLKWT---E 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~-------------~~~~~~l----~~~--~i~~~~~d~---~ 138 (272)
+..+++||||+ |.||++++++|.++ |++|++++|+ +++.+.+ ... .+..+..|. +
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA 90 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 34478999996 99999999999999 9999999983 2222221 112 233344442 1
Q ss_pred -----------ccCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeec
Q 024143 139 -----------ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYD 185 (272)
Q Consensus 139 -----------~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg 185 (272)
...++|++||+|+...... +.+.+ +.++ +...+ ..++|++||...+.
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 170 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK 170 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc
Confidence 1348999999999654211 11111 1111 12233 57899999987653
Q ss_pred CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH--HHHHHcCcc-----cC
Q 024143 186 CSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH--VYWLQKGTV-----DS 249 (272)
Q Consensus 186 ~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~--~~~l~~g~~-----~~ 249 (272)
.. .. ...|+.+|...|.+.+.+ + +..++|+.++++..... ...+..... ..
T Consensus 171 ~~-----------~~--~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 237 (280)
T 3pgx_A 171 AT-----------PG--NGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPP 237 (280)
T ss_dssp CC-----------TT--BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCC
T ss_pred CC-----------CC--chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhh
Confidence 21 11 258999999998876643 3 67899999999864421 111111110 01
Q ss_pred CCCcccccccHHHHHHHHHHHh
Q 024143 250 RPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 250 ~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+.....+++.+|+|++++..+
T Consensus 238 ~~~~~~r~~~p~dvA~~v~~L~ 259 (280)
T 3pgx_A 238 MPVQPNGFMTADEVADVVAWLA 259 (280)
T ss_dssp BTTBCSSCBCHHHHHHHHHHHH
T ss_pred cccCCCCCCCHHHHHHHHHHHh
Confidence 1111124899999999987654
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.34 E-value=5.4e-11 Score=103.95 Aligned_cols=175 Identities=14% Similarity=0.010 Sum_probs=107.8
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc------------hhh----hhhC--CceeeccCc---c-
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH------------HDE----LINM--GITPSLKWT---E- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~------------~~~----l~~~--~i~~~~~d~---~- 138 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++.. ... +... .+..+..|. +
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEA--GADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA 85 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 34478999996 99999999999999 9999999997321 111 1112 233344442 1
Q ss_pred ----------ccCCCCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCC
Q 024143 139 ----------ATQKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCS 187 (272)
Q Consensus 139 ----------~~~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~ 187 (272)
...++|++||+|+..... + +.+.+ +.++ +...+..++|++||...+...
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 165 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN 165 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCC
Confidence 134899999999964321 1 11111 1111 123456899999998765321
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-HHH-----HHHcCcc-----
Q 024143 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-HVY-----WLQKGTV----- 247 (272)
Q Consensus 188 ~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-~~~-----~l~~g~~----- 247 (272)
.+. ..|+.+|...|.+.+.+ + +..++|+.++++.... ... .+.+...
T Consensus 166 -----------~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (281)
T 3s55_A 166 -----------FAQ--ASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVES 232 (281)
T ss_dssp -----------TTC--HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHH
T ss_pred -----------CCC--chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHH
Confidence 112 58999999998877643 3 6789999999985431 100 0000000
Q ss_pred --cCCCCcccccccHHHHHHHHHHHh
Q 024143 248 --DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 248 --~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.........+++.+|+|++++..+
T Consensus 233 ~~~~~~~~~~~~~~p~dvA~~v~~L~ 258 (281)
T 3s55_A 233 VFASLHLQYAPFLKPEEVTRAVLFLV 258 (281)
T ss_dssp HHHHHCSSSCSCBCHHHHHHHHHHHH
T ss_pred HHHhhhccCcCCCCHHHHHHHHHHHc
Confidence 011122256899999999988654
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.34 E-value=3.1e-11 Score=104.91 Aligned_cols=168 Identities=10% Similarity=-0.008 Sum_probs=106.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-------hCCceeeccCc---c-----------cc
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSLKWT---E-----------AT 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-------~~~i~~~~~d~---~-----------~~ 140 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+. ...+..+..|. + ..
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAA--GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3478999996 99999999999999 999999999876654321 12344444443 1 13
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.++|++||+|+...... +.+.+ +.++ ....+ ..++|++||...|...
T Consensus 97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 165 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL----------- 165 (266)
T ss_dssp TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC-----------
Confidence 48999999999654221 11111 0111 11223 5699999998765321
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc------HHHHHHHcCcccCCCCcccccccHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG------AHVYWLQKGTVDSRPDHILNLIHYEVN 263 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~------~~~~~l~~g~~~~~~~~~~~~I~v~Dv 263 (272)
.+. ..|+.+|...|.+.+.+ + +..++|+.++.+... .....+.... ....+...+|+
T Consensus 166 ~~~--~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~------p~~r~~~p~dv 237 (266)
T 4egf_A 166 PDH--YAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARI------PLGRFAVPHEV 237 (266)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTC------TTSSCBCHHHH
T ss_pred CCC--hHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcC------CCCCCcCHHHH
Confidence 112 58999999998876653 3 578999999865311 1111122211 22346789999
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
|++++..+
T Consensus 238 a~~v~~L~ 245 (266)
T 4egf_A 238 SDAVVWLA 245 (266)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99987654
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1e-11 Score=106.78 Aligned_cols=169 Identities=14% Similarity=-0.001 Sum_probs=105.2
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------AT 140 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~ 140 (272)
+..++++|||+ |.||++++++|.++ |++|++++|++++.+.+. .. .+..+..|. + ..
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAE--GAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL 82 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 34478999996 99999999999999 999999999876654332 11 244444443 1 12
Q ss_pred CCCCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|+|||+|+..... + +.+.+ +.++ ....+ +++|++||...+... .
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~ 150 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV-----------R 150 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC-----------T
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC-----------C
Confidence 4899999999864321 1 11111 1111 12335 899999998754311 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH----HHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~----~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
+ ...|+.+|...+.+.+.. + +.+++||.+..+.... ......... + ....++..+|+|++
T Consensus 151 ~--~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~----~-~~~~~~~pedvA~~ 223 (247)
T 2jah_A 151 N--AAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQR----I-SQIRKLQAQDIAEA 223 (247)
T ss_dssp T--CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHH----T-TTSCCBCHHHHHHH
T ss_pred C--CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhc----c-cccCCCCHHHHHHH
Confidence 1 258999999888766543 3 6889999998763211 000000000 1 11125899999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++.++
T Consensus 224 v~~l~ 228 (247)
T 2jah_A 224 VRYAV 228 (247)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87654
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-11 Score=108.98 Aligned_cols=184 Identities=10% Similarity=-0.018 Sum_probs=106.4
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---CceeeccCc---c-------ccCCCCEEE
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT---E-------ATQKFPYVI 147 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~i~~~~~d~---~-------~~~~~D~Vi 147 (272)
+..++++|||+ |+||++++++|.++ |++|++++|++++.+.+... .+..+..|. + .+.++|+||
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv 91 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARR--GATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLI 91 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence 34478999996 99999999999999 99999999997776554321 244444553 1 234789999
Q ss_pred EecCCCCC------CChHHHH-------HHHHH--HhcCCCeEEEEecceeecCCC--CCCCCCCCCCCCCCCChHHHHH
Q 024143 148 FCAPPSRS------LDYPGDV-------RLAAL--SWNGEGSFLFTSSSAIYDCSD--NGACDEDSPVVPIGRSPRTDVL 210 (272)
Q Consensus 148 ~~a~~~~~------~~~~~~~-------~~l~~--~~~gvkr~V~~SS~~vYg~~~--~~~~~E~~p~~p~~~~~y~~sk 210 (272)
|+|+.... +++.+.+ ..+.. .....+|+|++||...|.... .....|..+..+. ..|+.+|
T Consensus 92 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK 169 (291)
T 3rd5_A 92 NNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPW--LAYSQSK 169 (291)
T ss_dssp ECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHH--HHHHHHH
T ss_pred ECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCc--chHHHHH
Confidence 99986431 1122111 11111 122346999999988774321 1122222233232 5899999
Q ss_pred HHHHHHHHHc-------C----eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 211 LKAEKVILEF-------G----GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 211 ~~aE~~l~~~-------~----~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+..|.+.+.+ + +..++||.+..+-.......... .. ...-..+-....+|+|++++.++
T Consensus 170 ~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~A~~~~~l~ 239 (291)
T 3rd5_A 170 LANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGD-AL-MSAATRVVATDADFGARQTLYAA 239 (291)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----------------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHH-HH-HHHHHHHHhCCHHHHHHHHHHHH
Confidence 9988776543 2 46789999876543211100000 00 00011122345899998887654
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.34 E-value=3.9e-11 Score=103.54 Aligned_cols=171 Identities=14% Similarity=0.062 Sum_probs=101.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D~ 145 (272)
.+++||||+ |.||++++++|.++ |++|++++|++++.+.... ..+..+..|. + ...++|+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQE--GATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999996 99999999999999 9999999998776544322 1234444443 1 1348999
Q ss_pred EEEecCCCCCC------------ChHHHHH-------HH----H--HHh------cCCCeEEEEecceeecCCCCCCCCC
Q 024143 146 VIFCAPPSRSL------------DYPGDVR-------LA----A--LSW------NGEGSFLFTSSSAIYDCSDNGACDE 194 (272)
Q Consensus 146 Vi~~a~~~~~~------------~~~~~~~-------~l----~--~~~------~gvkr~V~~SS~~vYg~~~~~~~~E 194 (272)
+||+|+..... ++.+.+. .+ + +.. .+..++|++||...+....
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~------ 158 (257)
T 3tpc_A 85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI------ 158 (257)
T ss_dssp EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT------
T ss_pred EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC------
Confidence 99999964321 0111110 11 1 011 1456899999988764321
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcc-cccccHHHHH
Q 024143 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHI-LNLIHYEVNT 264 (272)
Q Consensus 195 ~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~-~~~I~v~Dva 264 (272)
+. ..|+.+|...|.+.+.+ + +..++||.++.+........... ........ ..+.+.+|+|
T Consensus 159 -----~~--~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~~~r~~~~~dva 229 (257)
T 3tpc_A 159 -----GQ--AAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQD--ALAASVPFPPRLGRAEEYA 229 (257)
T ss_dssp -----TC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHHHHH
T ss_pred -----CC--cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHH--HHHhcCCCCCCCCCHHHHH
Confidence 12 68999999998876543 3 67899999988753221110000 00111111 3478899999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
++++..+
T Consensus 230 ~~v~~l~ 236 (257)
T 3tpc_A 230 ALVKHIC 236 (257)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9987654
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.3e-11 Score=104.35 Aligned_cols=178 Identities=14% Similarity=0.068 Sum_probs=108.7
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC------------cchhhh----hh--CCceeeccCc---c-
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA------------DHHDEL----IN--MGITPSLKWT---E- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~------------~~~~~l----~~--~~i~~~~~d~---~- 138 (272)
+..+++||||+ |.||++++++|.++ |++|++++|+. ++.... .. ..+..+..|. +
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES 88 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 44578999996 99999999999999 99999999872 222211 11 2344444553 1
Q ss_pred ----------ccCCCCEEEEecCCCCCCC----hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCC
Q 024143 139 ----------ATQKFPYVIFCAPPSRSLD----YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNG 190 (272)
Q Consensus 139 ----------~~~~~D~Vi~~a~~~~~~~----~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~ 190 (272)
...++|++||+|+...... +.+.+ +.++ +...+ ..++|++||...+....
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-- 166 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG-- 166 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC--
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc--
Confidence 1248999999999754321 11111 1111 11223 57999999987543210
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-H-HHHH----HcCcc---cCCCC
Q 024143 191 ACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-H-VYWL----QKGTV---DSRPD 252 (272)
Q Consensus 191 ~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-~-~~~l----~~g~~---~~~~~ 252 (272)
.+..+ ...|+.+|...|.+.+.+ + +..++|+.++.+.... . ..++ ..... .....
T Consensus 167 -----~~~~~--~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (278)
T 3sx2_A 167 -----SADPG--SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAM 239 (278)
T ss_dssp -----CSSHH--HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSS
T ss_pred -----cCCCC--chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhc
Confidence 01111 257999999998877653 2 6789999999885431 1 1111 11111 12222
Q ss_pred cccccccHHHHHHHHHHHh
Q 024143 253 HILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 253 ~~~~~I~v~Dva~ai~~a~ 271 (272)
. ..+++.+|+|++++..+
T Consensus 240 p-~~~~~p~dvA~~v~~l~ 257 (278)
T 3sx2_A 240 P-VEVLAPEDVANAVAWLV 257 (278)
T ss_dssp S-CSSBCHHHHHHHHHHHT
T ss_pred C-cCcCCHHHHHHHHHHHh
Confidence 2 56889999999987664
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.5e-11 Score=104.75 Aligned_cols=175 Identities=9% Similarity=-0.090 Sum_probs=101.6
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~ 143 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + ...++
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 84 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKG--GAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKV 84 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 34578999997 99999999999999 9999999999776654432 2344444443 1 13479
Q ss_pred CEEEEecCCCCC-C-----C---hHHHH-----------HHHH--HHhc----CCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRS-L-----D---YPGDV-----------RLAA--LSWN----GEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 144 D~Vi~~a~~~~~-~-----~---~~~~~-----------~~l~--~~~~----gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
|+|||+|+.... . + +.+.+ +.++ .... +..++|++||...+...
T Consensus 85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 154 (261)
T 3n74_A 85 DILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR---------- 154 (261)
T ss_dssp CEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC----------
T ss_pred CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC----------
Confidence 999999986431 1 1 11111 1111 0111 14579999997754211
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcC--cccCCCCcccccccHHHHHHH
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKG--TVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g--~~~~~~~~~~~~I~v~Dva~a 266 (272)
.. ...|+.+|...|.+.+.+ + +..++|+.+..+....+....... ...........+++.+|+|++
T Consensus 155 -~~--~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 231 (261)
T 3n74_A 155 -PN--LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEA 231 (261)
T ss_dssp -TT--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHH
T ss_pred -CC--ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHH
Confidence 11 257999999999877653 2 578999999876432211000000 001122233458899999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 232 ~~~l~ 236 (261)
T 3n74_A 232 AAFLC 236 (261)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 87654
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.8e-11 Score=104.61 Aligned_cols=164 Identities=10% Similarity=-0.024 Sum_probs=103.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------ccCCCCEE
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYV 146 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~~~~D~V 146 (272)
+..++++|||+ |.||++++++|.++ |++|++++|++++.+. +..+..|. + ....+|+|
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~-----~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l 91 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADA--GDKVAITYRSGEPPEG-----FLAVKCDITDTEQVEQAYKEIEETHGPVEVL 91 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSCCCTT-----SEEEECCTTSHHHHHHHHHHHHHHTCSCSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHhhcc-----ceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 34578999997 99999999999999 9999999998766432 33343442 1 23468999
Q ss_pred EEecCCCCC--------CChHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCh
Q 024143 147 IFCAPPSRS--------LDYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (272)
Q Consensus 147 i~~a~~~~~--------~~~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~ 205 (272)
||+|+.... +++.+.+ +.++ +...+.+++|++||...+... .+. ..
T Consensus 92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~--~~ 158 (253)
T 2nm0_A 92 IANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS-----------AGQ--AN 158 (253)
T ss_dssp EEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH-----------HHH--HH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-----------CCc--HH
Confidence 999986321 1222111 1111 123467899999997654211 011 57
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH----HHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV----YWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 206 y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~----~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+.+|...|.+.+.+ + +.+++|+.+..+...... ..+.... ....++..+|+|++++.++
T Consensus 159 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~------p~~~~~~p~dvA~~i~~l~ 231 (253)
T 2nm0_A 159 YAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQV------PLGRYARPEEIAATVRFLA 231 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTC------TTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHh
Confidence 999999998877653 2 678999998765321110 0111111 1224789999999987654
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.34 E-value=7.2e-11 Score=101.89 Aligned_cols=172 Identities=13% Similarity=-0.029 Sum_probs=105.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc--hhhhh----h--CCceeeccCc---c-----------ccC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELI----N--MGITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~--~~~l~----~--~~i~~~~~d~---~-----------~~~ 141 (272)
++++|||+ |.||++++++|.++ |++|++++|++++ .+.+. . ..+..+..|. + ...
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAAD--GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG 80 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 68999996 99999999999999 9999999998765 33321 1 1234444443 1 124
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCC-CeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
++|+|||+|+...... +.+.+ +.++ +...+. +++|++||...+... .
T Consensus 81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 149 (258)
T 3a28_C 81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF-----------P 149 (258)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC-----------T
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC-----------C
Confidence 7999999998643211 11111 1111 123356 899999998754321 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHH----Hc--Ccc---cCCCCcccccccHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWL----QK--GTV---DSRPDHILNLIHYE 261 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l----~~--g~~---~~~~~~~~~~I~v~ 261 (272)
+. ..|+.+|...|.+.+.+ + +.+++|+.+..+........+ .. ... .........+.+.+
T Consensus 150 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 227 (258)
T 3a28_C 150 IL--SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPE 227 (258)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHH
T ss_pred Cc--hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHH
Confidence 12 58999999998877653 3 688999998754211100000 00 000 00111123478999
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++..+
T Consensus 228 dvA~~v~~l~ 237 (258)
T 3a28_C 228 DVAGLVSFLA 237 (258)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999987654
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.33 E-value=6e-11 Score=103.78 Aligned_cols=170 Identities=12% Similarity=-0.002 Sum_probs=107.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~--~i~~~~~d~---~-----------~~~ 141 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. . .+..+..|. + ...
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEA--GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3478999996 99999999999999 9999999998776654322 1 344444443 1 124
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
++|++||+|+...... +.+.+ +.++ ....+ ..++|++||...+....
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~----------- 177 (276)
T 3r1i_A 109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI----------- 177 (276)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC-----------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC-----------
Confidence 8999999999754321 11111 1111 11233 37899999976542210
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH---HHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH---VYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~---~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
+.....|+.+|...|.+.+.+ + +..++||.+..+..... ...+....+ ...+...+|+|+++
T Consensus 178 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p------~~r~~~pedvA~~v 251 (276)
T 3r1i_A 178 PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIP------LGRMGRPEELTGLY 251 (276)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGST------TSSCBCGGGSHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCC------CCCCcCHHHHHHHH
Confidence 111268999999999877653 3 57899999987753321 111222111 12367789999887
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+..+
T Consensus 252 ~fL~ 255 (276)
T 3r1i_A 252 LYLA 255 (276)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 7654
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.6e-11 Score=104.57 Aligned_cols=171 Identities=13% Similarity=0.143 Sum_probs=98.1
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----CC--ceeeccCc---c----cc------CC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG--ITPSLKWT---E----AT------QK 142 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~~--i~~~~~d~---~----~~------~~ 142 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. .+ +..+.+|. + .+ .+
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 3478999996 99999999999999 9999999998877654322 22 34444553 1 11 47
Q ss_pred CCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|++||+|+...... +.+.+ +.++ +...+..++|++||...+... ..
T Consensus 84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~- 151 (252)
T 3h7a_A 84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG-----------SG- 151 (252)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC-----------TT-
T ss_pred ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC-----------CC-
Confidence 899999999644321 11111 1111 123456799999998754221 11
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--e-eEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--G-CVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~-~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
...|+.+|...+.+.+.+ + + .++.||.+..+-......... .......... ++..+|+|++++.++
T Consensus 152 -~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~-~~~pedvA~~~~~l~ 227 (252)
T 3h7a_A 152 -FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMF--GKDALANPDL-LMPPAAVAGAYWQLY 227 (252)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------CCHHHHHHHHHHHH
T ss_pred -CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhh--hhhhhcCCcc-CCCHHHHHHHHHHHH
Confidence 268999999998776653 3 4 468998886553221110000 0011111223 889999999987664
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.33 E-value=6.2e-11 Score=103.93 Aligned_cols=169 Identities=13% Similarity=0.051 Sum_probs=108.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~--~i~~~~~d~---~-----------~~~ 141 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. . .+..+..|. + ...
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFARE--GAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG 84 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3468999996 99999999999999 9999999998766544321 1 233444443 1 134
Q ss_pred CCCEEEEecCCCCC-C---C-----hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS-L---D-----YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~-~---~-----~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
++|++||+|+.... . + +.+.+. .++ ....+..++|++||...|... ..
T Consensus 85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~ 154 (280)
T 3tox_A 85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG----------FA 154 (280)
T ss_dssp CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC----------CT
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC----------CC
Confidence 89999999995421 1 1 111111 111 123456799999998765211 11
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH--------HHHHHHcCcccCCCCcccccccHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA--------HVYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~--------~~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
+ ...|+.+|...|.+.+.+ + +..++||.+..+.... ....+.... ....+...+|
T Consensus 155 ~--~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~ped 226 (280)
T 3tox_A 155 G--VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLH------ALKRIARPEE 226 (280)
T ss_dssp T--CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTS------TTSSCBCHHH
T ss_pred C--chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccC------ccCCCcCHHH
Confidence 1 268999999998877653 3 6789999999875321 111122211 2234788999
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|++++..+
T Consensus 227 vA~~v~~L~ 235 (280)
T 3tox_A 227 IAEAALYLA 235 (280)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999987654
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=2.9e-11 Score=105.39 Aligned_cols=168 Identities=11% Similarity=-0.018 Sum_probs=106.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC-Ccchhhh----hhC--CceeeccCc---c-----------cc
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDEL----INM--GITPSLKWT---E-----------AT 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~-~~~~~~l----~~~--~i~~~~~d~---~-----------~~ 140 (272)
..+++||||+ |.||++++++|.++ |++|++++|. .+..+.+ ... .+..+..|. + ..
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAA--GAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4468999996 99999999999999 9999999884 3333322 222 234444443 1 13
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|++||+|+...... +.+.+ +.++ +...+..++|++||...+....
T Consensus 105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 173 (269)
T 4dmm_A 105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNP----------- 173 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCT-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC-----------
Confidence 48999999999754221 11111 1111 1234678999999987653210
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH-HHHHcCcccCCCCcccccccHHHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV-YWLQKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~-~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
+ ...|+.+|...|.+.+.+ + +.+++||.++.+...... ..+....+ ...+.+.+|+|++++.
T Consensus 174 ~--~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~p------~~r~~~~~dvA~~v~~ 245 (269)
T 4dmm_A 174 G--QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVIP------LGRYGEAAEVAGVVRF 245 (269)
T ss_dssp T--CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGGCT------TSSCBCHHHHHHHHHH
T ss_pred C--chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhcCC------CCCCCCHHHHHHHHHH
Confidence 1 258999999888776543 3 678999999987644322 12222222 2346788999998876
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
.+
T Consensus 246 l~ 247 (269)
T 4dmm_A 246 LA 247 (269)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.32 E-value=4.2e-11 Score=103.90 Aligned_cols=173 Identities=10% Similarity=0.046 Sum_probs=107.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~ 141 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+. .. .+..+..|. + ...
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4478999996 99999999999999 999999999876654432 22 344444443 1 234
Q ss_pred CCCEEEEecCCCC-CCC--------hHHHHH-------HHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSR-SLD--------YPGDVR-------LAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~-~~~--------~~~~~~-------~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
++|++||+|+... ... +.+.+. .+. ....+ .++|++||...+... .
T Consensus 88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~ 155 (264)
T 3ucx_A 88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQ-----------A 155 (264)
T ss_dssp CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCC-----------T
T ss_pred CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCC-----------C
Confidence 8999999997532 111 111111 111 11223 799999998765321 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHH-H-HcCc----c---cCCCCcccccccHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYW-L-QKGT----V---DSRPDHILNLIHYE 261 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~-l-~~g~----~---~~~~~~~~~~I~v~ 261 (272)
+. ..|+.+|...|.+.+.+ + +..++|+.++++........ . ..+. . .........+.+.+
T Consensus 156 ~~--~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 233 (264)
T 3ucx_A 156 KY--GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTED 233 (264)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHH
T ss_pred cc--HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHH
Confidence 12 58999999998877643 3 67899999987643221100 0 0000 0 11222334578999
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++..+
T Consensus 234 dvA~~v~~L~ 243 (264)
T 3ucx_A 234 EVASAILFMA 243 (264)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9999987654
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.32 E-value=3.7e-11 Score=102.90 Aligned_cols=166 Identities=11% Similarity=0.053 Sum_probs=92.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc----------c---ccCCCCEEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT----------E---ATQKFPYVI 147 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~----------~---~~~~~D~Vi 147 (272)
..+++||||+ |+||++++++|.+ |++|++++|++++...+.. .++.....|. + ...++|+||
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv 80 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR---DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLV 80 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT---TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEE
Confidence 3478999997 9999999999864 6899999998777655543 2344444442 1 134799999
Q ss_pred EecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 148 FCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 148 ~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
|+|+...... +.+.+ +.++ +...+ .++|++||...|... .+. ..|
T Consensus 81 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~~~--~~Y 146 (245)
T 3e9n_A 81 HAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPH-----------PGN--TIY 146 (245)
T ss_dssp ECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------------C--HHH
T ss_pred ECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCC-----------CCc--hHH
Confidence 9998643211 11111 1111 11223 799999998876531 112 689
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 207 ~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|...|.+.+.+ + +.+++||.+.++......... ........+++.+|+|++++.++
T Consensus 147 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~p~dvA~~i~~l~ 214 (245)
T 3e9n_A 147 AASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ------GTNFRPEIYIEPKEIANAIRFVI 214 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------CCGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh------hcccccccCCCHHHHHHHHHHHH
Confidence 99999999877653 3 678999999876432211000 11112234789999999998765
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.32 E-value=3.3e-11 Score=107.63 Aligned_cols=174 Identities=12% Similarity=-0.028 Sum_probs=101.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C----CceeeccCc---c-----------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M----GITPSLKWT---E-----------A 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~----~i~~~~~d~---~-----------~ 139 (272)
..++|||||+ |+||++++++|+++ |++|++++|++++.+.+.. . .+..+..|. + .
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 3468999997 99999999999999 9999999999776543321 1 344444553 1 1
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHHH-------HH----HH--HHh------cCCCeEEEEecceeecCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGDV-------RL----AA--LSW------NGEGSFLFTSSSAIYDCSDNGAC 192 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~----l~--~~~------~gvkr~V~~SS~~vYg~~~~~~~ 192 (272)
...+|+|||+|+...... +.+.+ .. ++ ... .+..++|++||...+...
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~----- 159 (319)
T 3ioy_A 85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA----- 159 (319)
T ss_dssp TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC-----
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC-----
Confidence 347899999999643211 11111 11 11 111 136789999998765421
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHH----Hc---C--eeEEeeCceecCCCcHHH--HHHHcCcc-------cCC-CCc
Q 024143 193 DEDSPVVPIGRSPRTDVLLKAEKVIL----EF---G--GCVLRLAGLYKADRGAHV--YWLQKGTV-------DSR-PDH 253 (272)
Q Consensus 193 ~E~~p~~p~~~~~y~~sk~~aE~~l~----~~---~--~~IlRp~~iyG~~~~~~~--~~l~~g~~-------~~~-~~~ 253 (272)
| ....|+.+|...+.+.+ ++ + +++++||.+.++-..... .....+.. ... ...
T Consensus 160 -------~-~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (319)
T 3ioy_A 160 -------G-SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGV 231 (319)
T ss_dssp -------S-SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCG
T ss_pred -------C-CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHh
Confidence 1 11589999996555443 33 3 688999999876422110 00000100 000 111
Q ss_pred ccccccHHHHHHHHHHHh
Q 024143 254 ILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 254 ~~~~I~v~Dva~ai~~a~ 271 (272)
....++.+|+|+.++.++
T Consensus 232 ~~~~~~pe~vA~~~~~al 249 (319)
T 3ioy_A 232 HEFGMEPDVIGARVIEAM 249 (319)
T ss_dssp GGSSBCHHHHHHHHHHHH
T ss_pred hhcCCCHHHHHHHHHHHH
Confidence 112389999999998875
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.32 E-value=9.4e-12 Score=108.78 Aligned_cols=169 Identities=12% Similarity=0.084 Sum_probs=106.5
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh---hhhhCC--ceeeccCc---c----------ccCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---ELINMG--ITPSLKWT---E----------ATQK 142 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~---~l~~~~--i~~~~~d~---~----------~~~~ 142 (272)
+..+++||||+ |.||++++++|.++ |++|++++|.+...+ .+...+ +..+..|. + ...+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~ 106 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARA--GAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRR 106 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence 34578999996 99999999999999 999999997643221 222222 33444443 1 1247
Q ss_pred CCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|+|||+|+...... +.+.+ +.++ +...+..++|++||...|... .+.
T Consensus 107 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-----------~~~ 175 (273)
T 3uf0_A 107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG-----------RNV 175 (273)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------SSC
T ss_pred CcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC-----------CCC
Confidence 999999999654221 11111 1111 123467899999998765321 112
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH------HHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH------VYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~------~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
..|+.+|...|.+.+.+ + +..++||.++.+..... ...+.+..+ ...+...+|+|++
T Consensus 176 --~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedva~~ 247 (273)
T 3uf0_A 176 --AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIP------AGRWATPEDMVGP 247 (273)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHST------TSSCBCGGGGHHH
T ss_pred --hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCC------CCCCCCHHHHHHH
Confidence 58999999999877653 3 67899999998653211 111121111 2336788999998
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 248 v~~L~ 252 (273)
T 3uf0_A 248 AVFLA 252 (273)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87654
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.31 E-value=4e-11 Score=104.58 Aligned_cols=169 Identities=9% Similarity=-0.006 Sum_probs=106.9
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------AT 140 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~ 140 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++++.+.+. .. .+..+..|. + ..
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARR--GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 34568999996 99999999999999 999999999876554332 11 234444442 1 13
Q ss_pred CCCCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|++||+|+..... + +.+.+ +.++ ....+..++|++||...+....
T Consensus 104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 172 (270)
T 3ftp_A 104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNP----------- 172 (270)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC-----------
Confidence 4899999999864321 1 11111 1111 1234567999999987653211
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
+. ..|+.+|...|.+.+.+ + +.+++|+.+..+... .....+... .....+.+.+|+|++
T Consensus 173 ~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~------~p~~r~~~pedvA~~ 244 (270)
T 3ftp_A 173 GQ--VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQ------IPLGRLGSPEDIAHA 244 (270)
T ss_dssp TB--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTT------CTTCSCBCHHHHHHH
T ss_pred Cc--hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhc------CCCCCCCCHHHHHHH
Confidence 12 58999999888776543 3 678999999764211 111112221 122347889999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 245 v~~L~ 249 (270)
T 3ftp_A 245 VAFLA 249 (270)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87654
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=2e-11 Score=106.71 Aligned_cols=186 Identities=11% Similarity=-0.004 Sum_probs=108.5
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc------------chhh----hhhC--CceeeccCc---c-
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD------------HHDE----LINM--GITPSLKWT---E- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~------------~~~~----l~~~--~i~~~~~d~---~- 138 (272)
+..+++||||+ |.||++++++|.++ |++|++++|+.+ +.+. +... .+..+..|. +
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence 34478999996 99999999999999 999999998722 1111 1111 234444443 1
Q ss_pred ----------ccCCCCEEEEecCCCCCC------ChHHHHH-------HHHH---H-hcCCCeEEEEecceeecCCCCCC
Q 024143 139 ----------ATQKFPYVIFCAPPSRSL------DYPGDVR-------LAAL---S-WNGEGSFLFTSSSAIYDCSDNGA 191 (272)
Q Consensus 139 ----------~~~~~D~Vi~~a~~~~~~------~~~~~~~-------~l~~---~-~~gvkr~V~~SS~~vYg~~~~~~ 191 (272)
...++|++||+|+..... ++.+.+. .+.. . ..+..++|++||...+......+
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 165 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPP 165 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccc
Confidence 124899999999964321 1211111 1111 1 12346999999987764322223
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH--HHHHHcC----c-------ccC
Q 024143 192 CDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH--VYWLQKG----T-------VDS 249 (272)
Q Consensus 192 ~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~--~~~l~~g----~-------~~~ 249 (272)
..|..+..+. ..|+.+|...|.+.+.+ + +..++||.++.+..... ...+... . ...
T Consensus 166 ~~~~~~~~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (287)
T 3pxx_A 166 GAGGPQGPGG--AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPA 243 (287)
T ss_dssp -----CHHHH--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGG
T ss_pred cccccCCCcc--chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhh
Confidence 3333332222 57999999999877653 3 67899999998753311 1111100 0 001
Q ss_pred CCCcccccccHHHHHHHHHHHh
Q 024143 250 RPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 250 ~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.......+.+.+|+|++++..+
T Consensus 244 ~~~~~~~~~~p~dva~~v~fL~ 265 (287)
T 3pxx_A 244 MQAMPTPYVEASDISNAVCFLA 265 (287)
T ss_dssp GCSSSCSCBCHHHHHHHHHHHH
T ss_pred hcccCCCCCCHHHHHhhHheec
Confidence 1111256899999999987654
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=3.6e-11 Score=103.44 Aligned_cols=169 Identities=8% Similarity=0.029 Sum_probs=104.3
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEe-cCCcchhh----hhhC--CceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDE----LINM--GITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~-R~~~~~~~----l~~~--~i~~~~~d~---~-----------~ 139 (272)
...++|||||+ |.||++++++|.++ |++|++++ |+.++... +... .+..+..|. + .
T Consensus 11 ~~~k~vlITGas~giG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 11 MSQRIAYVTGGMGGIGTSICQRLHKD--GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE 88 (256)
T ss_dssp --CEEEEETTTTSHHHHHHHHHHHHT--TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence 45578999996 99999999999999 99999988 54444322 2222 234444442 1 2
Q ss_pred cCCCCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
..++|+|||+|+..... + +.+.+ +.++ +...+.+++|++||...+...
T Consensus 89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 157 (256)
T 3ezl_A 89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ----------- 157 (256)
T ss_dssp TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC-----------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC-----------
Confidence 34789999999864321 1 11111 1111 123467899999998765321
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
.+. ..|+.+|...|.+.+.+ + +.+++|+.+..+... .....+....+ ...+...+|+|+
T Consensus 158 ~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~ 229 (256)
T 3ezl_A 158 FGQ--TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIP------VRRLGSPDEIGS 229 (256)
T ss_dssp SCC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHST------TSSCBCHHHHHH
T ss_pred CCC--cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCC------CCCCcCHHHHHH
Confidence 122 68999999888776543 3 678999998764211 11112222221 233678999999
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++..+
T Consensus 230 ~~~~l~ 235 (256)
T 3ezl_A 230 IVAWLA 235 (256)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 887654
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=2.8e-11 Score=103.36 Aligned_cols=162 Identities=12% Similarity=-0.045 Sum_probs=101.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCCE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D~ 145 (272)
++++||||+ |.||++++++|.++ |++|++++|++++.+.+.. .++..+..|. + ....+|+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVER--GHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 478999997 99999999999999 9999999998776554322 1344454553 1 1347899
Q ss_pred EEEecCCCCCC---C-----hHHHHH-----------HHHHH-hcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCh
Q 024143 146 VIFCAPPSRSL---D-----YPGDVR-----------LAALS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (272)
Q Consensus 146 Vi~~a~~~~~~---~-----~~~~~~-----------~l~~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~ 205 (272)
+||+|+..... + +.+.+. .++.. .....++|++||...+... ... ..
T Consensus 81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~--~~ 147 (235)
T 3l6e_A 81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK-----------ANE--SL 147 (235)
T ss_dssp EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC-----------SSH--HH
T ss_pred EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC-----------CCC--cH
Confidence 99999964321 1 111111 11100 1122399999997754321 011 58
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 206 y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+.+|...+.+.+.+ + +..++||.+..+..... .. .....++..+|+|++++.++
T Consensus 148 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~----~~-------~~~~~~~~pedvA~~v~~l~ 211 (235)
T 3l6e_A 148 YCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT----DH-------VDPSGFMTPEDAAAYMLDAL 211 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------CBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc----CC-------CCCcCCCCHHHHHHHHHHHH
Confidence 999999999877643 2 57889998865432111 00 01124788999999988765
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=5.8e-12 Score=108.79 Aligned_cols=167 Identities=7% Similarity=-0.110 Sum_probs=102.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHh-cCCCCeEEEEecCCcchhhh----hh--CCceeeccCc---c----c-------cC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQ-EHPGCQIYGQTMTADHHDEL----IN--MGITPSLKWT---E----A-------TQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~-~~~g~~V~~~~R~~~~~~~l----~~--~~i~~~~~d~---~----~-------~~ 141 (272)
+++|||||+ |+||++++++|.+ + |++|++++|++++...+ .. ..+..+..|. + . ..
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLF--SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHS--SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhc--CCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 578999996 9999999999999 9 99999999986554332 21 1344454553 1 1 23
Q ss_pred CCCEEEEecCCCCCC----ChHHHHH-----------HHHH-Hhc---CCCeEEEEecceeecC-CC----------CCC
Q 024143 142 KFPYVIFCAPPSRSL----DYPGDVR-----------LAAL-SWN---GEGSFLFTSSSAIYDC-SD----------NGA 191 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~----~~~~~~~-----------~l~~-~~~---gvkr~V~~SS~~vYg~-~~----------~~~ 191 (272)
++|+|||+|+..... ...+... .++. ... ..+++|++||...|.. .. ...
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~ 161 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET 161 (276)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccc
Confidence 799999999864321 1111111 1111 111 1359999999877632 00 012
Q ss_pred CCCCC-------------------CCCCCCCChHHHHHHHHHHHHHH-----------cC--eeEEeeCceecCCCcHHH
Q 024143 192 CDEDS-------------------PVVPIGRSPRTDVLLKAEKVILE-----------FG--GCVLRLAGLYKADRGAHV 239 (272)
Q Consensus 192 ~~E~~-------------------p~~p~~~~~y~~sk~~aE~~l~~-----------~~--~~IlRp~~iyG~~~~~~~ 239 (272)
++|++ +..|. +.|+.+|...|.+++. .+ +.+++||.+..+....
T Consensus 162 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-- 237 (276)
T 1wma_A 162 ITEEELVGLMNKFVEDTKKGVHQKEGWPS--SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-- 237 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCTTTTTCCS--CHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT--
T ss_pred cchhhhhhhhhhhhhhhcccccccCCCcc--chhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc--
Confidence 22221 11233 6899999998877653 24 6788999987653211
Q ss_pred HHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 240 YWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 240 ~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..+++.+|+|++++.++
T Consensus 238 ---------------~~~~~~~~~a~~~~~l~ 254 (276)
T 1wma_A 238 ---------------KATKSPEEGAETPVYLA 254 (276)
T ss_dssp ---------------TCSBCHHHHTHHHHHHH
T ss_pred ---------------cccCChhHhhhhHhhhh
Confidence 12567788887776554
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.31 E-value=6e-11 Score=102.03 Aligned_cols=168 Identities=9% Similarity=-0.037 Sum_probs=107.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D 144 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. .....+..|. + ...++|
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 85 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAER--GAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD 85 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 3478999996 99999999999999 9999999998766544322 1233333442 1 134899
Q ss_pred EEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
++||+|+...... +.+.+ +.++ +...+..++|++||...+... .+.
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~-- 152 (248)
T 3op4_A 86 ILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN-----------AGQ-- 152 (248)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTC--
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----------CCC--
Confidence 9999999654221 11111 1111 123467899999998765321 112
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH----HHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~----~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
..|+.+|...|.+.+.+ + +..++||.+..+-... ......... ....+.+.+|+|++++..
T Consensus 153 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~------p~~r~~~p~dva~~v~~L 226 (248)
T 3op4_A 153 ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQV------PAGRLGDPREIASAVAFL 226 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTC------TTCSCBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcC------CCCCCcCHHHHHHHHHHH
Confidence 68999999888776643 3 6789999998764221 111122222 223478899999998765
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 227 ~ 227 (248)
T 3op4_A 227 A 227 (248)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=5.4e-11 Score=103.95 Aligned_cols=169 Identities=9% Similarity=0.013 Sum_probs=107.2
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-------hCCceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-------~~~i~~~~~d~---~-----------~ 139 (272)
+..+++||||+ |.||++++++|.++ |++|++++|+.++..... ...+..+..|. + .
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRH--GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE 102 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45578999996 99999999999999 999999999866543321 12344444443 1 1
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
..++|++||+|+...... +.+.+ +.++ +...+..++|++||...+....
T Consensus 103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 172 (277)
T 4fc7_A 103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQA---------- 172 (277)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCT----------
T ss_pred cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC----------
Confidence 348999999998543211 11111 1111 0123467999999987653211
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc-------HHHHHHHcCcccCCCCcccccccHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-------AHVYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~-------~~~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
.. ..|+.+|...+.+.+.+ + +..++||.++++... .....+....+ ...+...+|
T Consensus 173 -~~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p------~~r~~~p~d 243 (277)
T 4fc7_A 173 -LQ--VHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP------LQRLGNKTE 243 (277)
T ss_dssp -TC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTST------TSSCBCHHH
T ss_pred -Cc--HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCC------CCCCcCHHH
Confidence 11 58999999998877653 3 578999999876311 11111222222 223678999
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|++++..+
T Consensus 244 vA~~v~fL~ 252 (277)
T 4fc7_A 244 IAHSVLYLA 252 (277)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999987654
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.30 E-value=3.3e-11 Score=104.85 Aligned_cols=173 Identities=10% Similarity=-0.033 Sum_probs=100.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE-ecCCcchhhhh----hC--CceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELI----NM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~-~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~ 141 (272)
++++||||+ |.||++++++|.++ |++|+++ .|+.+..+.+. .. .+..+..|. + ...
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQ--GWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 467999997 99999999999999 9999887 55554433321 22 233444443 1 134
Q ss_pred CCCEEEEecCCCCC-CC--------hHHHHH-----------HHHH--Hh---cCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS-LD--------YPGDVR-----------LAAL--SW---NGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~-~~--------~~~~~~-----------~l~~--~~---~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
++|+|||+|+.... .. +.+.+. .++. .. .+.+++|++||...+....
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 175 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA-------- 175 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT--------
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC--------
Confidence 89999999996432 11 111110 1110 11 1356899999987654211
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
.. ...|+.+|...|.+.+.+ + +.+++||.++++........ ..............+.+.+|+|+++
T Consensus 176 --~~--~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~edvA~~i 250 (272)
T 4e3z_A 176 --TQ--YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLP-DRAREMAPSVPMQRAGMPEEVADAI 250 (272)
T ss_dssp --TT--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCTTSSCBCHHHHHHHH
T ss_pred --CC--cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCCh-HHHHHHhhcCCcCCCcCHHHHHHHH
Confidence 01 157999999999876543 3 68899999998743210000 0000011122233467899999998
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 251 ~~l~ 254 (272)
T 4e3z_A 251 LYLL 254 (272)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.30 E-value=4.1e-11 Score=104.14 Aligned_cols=174 Identities=11% Similarity=-0.022 Sum_probs=105.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC-Ccchhh----hhh--CCceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDE----LIN--MGITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~-~~~~~~----l~~--~~i~~~~~d~---~-----------~ 139 (272)
...++++|||+ |.||++++++|.++ |++|++++|. .+.... +.. ..+..+..|. + .
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDA--GMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 34467899996 99999999999999 9999999854 333222 111 2344444553 1 1
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
..++|+|||+|+...... +.+.+ +.++ +...+..++|++||...+....
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 170 (269)
T 3gk3_A 101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAF---------- 170 (269)
T ss_dssp HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------
T ss_pred cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCC----------
Confidence 348999999998643211 11111 1111 1234568999999987653211
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
+. ..|+.+|...+.+.+.+ + +..++||.+..+.............. ........+...+|+|++++.
T Consensus 171 -~~--~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~p~dvA~~v~~ 246 (269)
T 3gk3_A 171 -GQ--ANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKI-LPQIPVGRLGRPDEVAALIAF 246 (269)
T ss_dssp -TB--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCS-GGGCTTSSCBCHHHHHHHHHH
T ss_pred -Cc--chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHh-hhcCCcCCccCHHHHHHHHHH
Confidence 12 58999999888776543 3 67899999987653221111111111 111223346789999999876
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
.+
T Consensus 247 L~ 248 (269)
T 3gk3_A 247 LC 248 (269)
T ss_dssp HT
T ss_pred Hh
Confidence 54
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.30 E-value=7.9e-12 Score=109.15 Aligned_cols=168 Identities=14% Similarity=0.059 Sum_probs=107.0
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~ 141 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+. .. .+..+..|. + ...
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVA--GARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 4478999996 99999999999999 999999999876654332 22 344444443 1 134
Q ss_pred CCCEEEEecCCCCCCC--------hHHHHH-------HH----H--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDVR-------LA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~~-------~l----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
++|+|||+|+...... +.+.+. .+ + +...+..++|++||...+... .+
T Consensus 103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~ 171 (271)
T 4ibo_A 103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR-----------AT 171 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-----------TT
T ss_pred CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC-----------CC
Confidence 7999999999643221 111110 11 1 123456799999997653211 12
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH------HHHHHcCcccCCCCcccccccHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH------VYWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~------~~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
. ..|+.+|...|.+.+.+ + +..++||.+..+..... ..++....+ ...+...+|+|+
T Consensus 172 ~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedva~ 243 (271)
T 4ibo_A 172 V--APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTP------AKRWGKPQELVG 243 (271)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHST------TCSCBCGGGGHH
T ss_pred c--hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCC------CCCCcCHHHHHH
Confidence 2 68999999999877653 3 67899999987643221 111222222 223677899998
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++..+
T Consensus 244 ~v~~L~ 249 (271)
T 4ibo_A 244 TAVFLS 249 (271)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 877653
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.6e-11 Score=104.44 Aligned_cols=161 Identities=16% Similarity=0.130 Sum_probs=102.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCcc-----------ccCCCCEEEEec
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFCA 150 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~-----------~~~~~D~Vi~~a 150 (272)
+++++||||+ |.||++++++|.++ |++|++++|++++... ..+.....|.+ ....+|+|||+|
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~---~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~A 95 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSK--SWNTISIDFRENPNAD---HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAA 95 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCTTSS---EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCcccccc---cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4478999996 99999999999999 9999999998765432 12222233321 234789999999
Q ss_pred CCCCC----CC-----hHHHHH-H------HHH---H-hcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHH
Q 024143 151 PPSRS----LD-----YPGDVR-L------AAL---S-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (272)
Q Consensus 151 ~~~~~----~~-----~~~~~~-~------l~~---~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk 210 (272)
+.... .+ +.+.+. + +.. . .....++|++||...+... .+. ..|+.+|
T Consensus 96 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y~~sK 162 (251)
T 3orf_A 96 GGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT-----------SGM--IAYGATK 162 (251)
T ss_dssp CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------TTB--HHHHHHH
T ss_pred ccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC-----------CCC--chhHHHH
Confidence 86321 11 111111 1 111 1 1113589999998765321 112 5899999
Q ss_pred HHHHHHHHHc---------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 211 LKAEKVILEF---------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 211 ~~aE~~l~~~---------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
...|.+.+.+ + +.+++||.+..+. ...... ......+++.+|+|++++.++
T Consensus 163 aa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~----~~~~~~------~~~~~~~~~~~dva~~i~~l~ 224 (251)
T 3orf_A 163 AATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT----NRKYMS------DANFDDWTPLSEVAEKLFEWS 224 (251)
T ss_dssp HHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH----HHHHCT------TSCGGGSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc----hhhhcc------cccccccCCHHHHHHHHHHHh
Confidence 9999887642 2 5788999886532 211111 123345788999999988764
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.1e-11 Score=108.63 Aligned_cols=173 Identities=15% Similarity=0.075 Sum_probs=107.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D 144 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + ...++|
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADE--GCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVD 105 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4468999996 99999999999999 9999999998766554322 2344444443 1 134899
Q ss_pred EEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
++||+|+..... + +.+.+ +.++ +...+..++|++||...+... .+.
T Consensus 106 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~-----------~~~-- 172 (277)
T 3gvc_A 106 KLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV-----------GGT-- 172 (277)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTB--
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------CCc--
Confidence 999999964321 1 11111 1111 123456799999997754221 112
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcc---cCC---CCcccccccHHHHHHHHH
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTV---DSR---PDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~---~~~---~~~~~~~I~v~Dva~ai~ 268 (272)
..|+.+|...|.+.+.. + +.+++|+.++++....... ...+.. ... ......+.+.+|+|++++
T Consensus 173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~ 251 (277)
T 3gvc_A 173 GAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMA-MFDGALGAGGARSMIARLQGRMAAPEEMAGIVV 251 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHT-CC------CCHHHHHHHHHSSCBCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhh-cchhhHHHHhhhhhhhccccCCCCHHHHHHHHH
Confidence 68999999999877643 3 6789999998753211100 000000 000 011234788999999987
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 252 ~L~ 254 (277)
T 3gvc_A 252 FLL 254 (277)
T ss_dssp HHH
T ss_pred HHc
Confidence 654
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.9e-11 Score=104.84 Aligned_cols=170 Identities=11% Similarity=0.015 Sum_probs=100.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D 144 (272)
..+++||||+ |.||++++++|.++ |++|++++|+.++.+.+.. ..+..+.+|. + ...++|
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGA--GYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3467999996 99999999999999 9999999998776554322 2344444443 1 134899
Q ss_pred EEEEecCCCCC-C---C-----hHHHH-----------HHHH--HHhcC--CCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNG--EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 145 ~Vi~~a~~~~~-~---~-----~~~~~-----------~~l~--~~~~g--vkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
++||+|+.... . + +.+.+ +.++ ....+ ..++|++||...+... .+
T Consensus 105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-----------~~ 173 (272)
T 4dyv_A 105 VLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR-----------PY 173 (272)
T ss_dssp EEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC-----------TT
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC-----------CC
Confidence 99999996432 1 1 11111 1111 12223 4699999998754221 12
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcc-cCCCCcccccccHHHHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTV-DSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~-~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
. ..|+.+|...|.+.+.+ + +..++||.+..+..... ..+.. .........++..+|+|++++.+
T Consensus 174 ~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~----~~~~~~~~~~~~~~~~~~pedvA~~v~fL 247 (272)
T 4dyv_A 174 S--APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKM----KAGVPQADLSIKVEPVMDVAHVASAVVYM 247 (272)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----------------------------CHHHHHHHHHHH
T ss_pred c--hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhh----cccchhhhhcccccCCCCHHHHHHHHHHH
Confidence 2 68999999999877653 2 57789999876542211 11111 00111223478999999998865
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 248 ~ 248 (272)
T 4dyv_A 248 A 248 (272)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=6.1e-11 Score=102.04 Aligned_cols=170 Identities=9% Similarity=-0.029 Sum_probs=102.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCCEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPYV 146 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D~V 146 (272)
|+++|||+ |.||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + ...++|++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 78 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL 78 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 47899996 99999999999999 9999999998766554432 1344444443 1 12379999
Q ss_pred EEecCCCC-CC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 147 IFCAPPSR-SL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 147 i~~a~~~~-~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
||+|+... .. + +.+.+ +.++ +...+.+++|++||...+... .+. .
T Consensus 79 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~--~ 145 (248)
T 3asu_A 79 VNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY-----------AGG--N 145 (248)
T ss_dssp EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------TTC--H
T ss_pred EECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC-----------CCC--c
Confidence 99998642 11 1 11111 1111 123467899999998754211 112 5
Q ss_pred hHHHHHHHHHHHHHHc-------C--eeEEeeCceec-CCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYK-ADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG-~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.|+.+|...|.+.+.+ + +.+++||.+.| +...... -..............++..+|+|++++.++
T Consensus 146 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~--~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~ 220 (248)
T 3asu_A 146 VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRF--KGDDGKAEKTYQNTVALTPEDVSEAVWWVS 220 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC------------------------CCBCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcc--cCchHHHHHHHhccCCCCHHHHHHHHHHHh
Confidence 8999999999877643 2 67899999985 3211000 000000000001123478999999987654
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=3.4e-11 Score=106.13 Aligned_cols=172 Identities=9% Similarity=-0.006 Sum_probs=106.6
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch-hh----hhhC--CceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DE----LINM--GITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~-~~----l~~~--~i~~~~~d~---~-----------~ 139 (272)
+..+++||||+ |.||++++++|.++ |++|++++|+.+.. +. +... .+..+..|. + .
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 44578999996 99999999999999 99999999986532 11 1112 234444443 1 1
Q ss_pred cCCCCEEEEecCCCCC-CC--------hHHHHH-------HHHH-Hh---cCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRS-LD--------YPGDVR-------LAAL-SW---NGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~-~~--------~~~~~~-------~l~~-~~---~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
...+|++||+|+.... .. +.+.+. .+.. .. ...+++|++||...|....
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 191 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE----------- 191 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT-----------
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC-----------
Confidence 3479999999986432 10 111111 1111 11 1245899999998765321
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH--HHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH--VYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~--~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
+. ..|+.+|...|.+.+.+ + +..++||.++.+..... ..... ..........+.+.+|+|++++
T Consensus 192 ~~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~---~~~~~~p~~r~~~p~dvA~~v~ 266 (291)
T 3ijr_A 192 TL--IDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVS---QFGSNVPMQRPGQPYELAPAYV 266 (291)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHH---HTTTTSTTSSCBCGGGTHHHHH
T ss_pred CC--hhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHH---HHHccCCCCCCcCHHHHHHHHH
Confidence 12 58999999999877653 3 67899999987642110 00000 0112223345778999999987
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 267 ~L~ 269 (291)
T 3ijr_A 267 YLA 269 (291)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.28 E-value=7.4e-11 Score=103.03 Aligned_cols=170 Identities=15% Similarity=0.003 Sum_probs=102.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc---c-----------ccCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~---~-----------~~~~~D 144 (272)
+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + ....+|
T Consensus 22 k~vlVTGas~gIG~aia~~La~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 99 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEA--GWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLR 99 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 68999997 99999999999999 9999999998766544322 1344444543 1 134679
Q ss_pred EEEEecCCCCC-CC--------hHHHH-----------HHHH--HHhcCCC-eEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRS-LD--------YPGDV-----------RLAA--LSWNGEG-SFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 145 ~Vi~~a~~~~~-~~--------~~~~~-----------~~l~--~~~~gvk-r~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|||+|+.... .. +.+.+ +.++ +...+.+ ++|++||...+... .+.
T Consensus 100 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~-----------~~~ 168 (272)
T 2nwq_A 100 GLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY-----------PGS 168 (272)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCC-----------TTC
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCC-----------CCC
Confidence 99999986431 11 11111 1111 1234567 99999998754311 112
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..|+.+|...|.+.+.+ + +.+++||.+..+....... ..............++..+|+|++++.++
T Consensus 169 --~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~~~~pedvA~~v~~l~ 243 (272)
T 2nwq_A 169 --HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFG--GDQARYDKTYAGAHPIQPEDIAETIFWIM 243 (272)
T ss_dssp --HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC----------------------CCCCBCHHHHHHHHHHHH
T ss_pred --chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccc--cchHHHHHhhccCCCCCHHHHHHHHHHHh
Confidence 58999999999887653 2 6789999998764211000 00000000000112578999999988765
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.28 E-value=5.6e-11 Score=103.24 Aligned_cols=174 Identities=14% Similarity=0.074 Sum_probs=106.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC----CceeeccCc---c-------ccCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM----GITPSLKWT---E-------ATQKF 143 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~----~i~~~~~d~---~-------~~~~~ 143 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+... .. .+..+..|. + ...++
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAE--GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence 3468999996 99999999999999 999999999876544321 11 123344443 1 24589
Q ss_pred CEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
|++||+|+...... +.+.+ +.++ +...+.+++|++||...|... .+.
T Consensus 87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~- 154 (267)
T 3t4x_A 87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS-----------QEM- 154 (267)
T ss_dssp SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC-----------TTC-
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC-----------Ccc-
Confidence 99999999654321 11111 1111 123456799999998765321 112
Q ss_pred CChHHHHHHHHHHHHHHc----C-----eeEEeeCceecCCCcHHHHHHHcCc----------c---cCCCCcccccccH
Q 024143 203 RSPRTDVLLKAEKVILEF----G-----GCVLRLAGLYKADRGAHVYWLQKGT----------V---DSRPDHILNLIHY 260 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~----~-----~~IlRp~~iyG~~~~~~~~~l~~g~----------~---~~~~~~~~~~I~v 260 (272)
..|+.+|...|.+.+.+ + +..++||.+..+....+......+. . .........+.+.
T Consensus 155 -~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p 233 (267)
T 3t4x_A 155 -AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRP 233 (267)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCT
T ss_pred -hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCH
Confidence 68999999999877653 2 5678999887642111110000000 0 0011123458899
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|++++..+
T Consensus 234 edvA~~v~fL~ 244 (267)
T 3t4x_A 234 EEIAHLVTFLS 244 (267)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 99999987654
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.28 E-value=3.3e-11 Score=104.70 Aligned_cols=167 Identities=14% Similarity=0.042 Sum_probs=105.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D 144 (272)
..++++|||+ |.||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + ....+|
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 82 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH 82 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence 3468999997 99999999999999 9999999998776554432 1344444443 1 134789
Q ss_pred EEEEecCCCCCCC--------hHHHHH-------HHH---HHh-cCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCh
Q 024143 145 YVIFCAPPSRSLD--------YPGDVR-------LAA---LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~~-------~l~---~~~-~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~ 205 (272)
+|||+|+...... +.+.+. .+. ... ...+++|++||...|+.. +. ..
T Consensus 83 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------~~--~~ 148 (263)
T 2a4k_A 83 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF------------GL--AH 148 (263)
T ss_dssp EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH------------HH--HH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCC------------Cc--HH
Confidence 9999998543211 111110 111 011 124699999998876210 11 57
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH----HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 206 y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~----~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+.+|...|.+.+.. + +.++||+.++++.... ....+....+ ...+.+.+|+|++++.++
T Consensus 149 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p------~~~~~~p~dvA~~v~~l~ 221 (263)
T 2a4k_A 149 YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASP------LGRAGRPEEVAQAALFLL 221 (263)
T ss_dssp HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTST------TCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHh
Confidence 999998877766542 3 6889999998764211 1111222221 123688999999987664
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.27 E-value=6.8e-11 Score=102.90 Aligned_cols=170 Identities=8% Similarity=0.013 Sum_probs=100.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC--ceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~--i~~~~~d~---~-----------~~~~ 142 (272)
.+++||||+ |.||++++++|.++ |++|++++|++++.+.+. ..+ +..+..|. + ....
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVA--GAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999997 99999999999999 999999999876654432 222 23333442 1 1348
Q ss_pred CCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|++||+|+...... +.+.+ +.++ +...+..++|++||...+... ..
T Consensus 82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-----------~~- 149 (264)
T 3tfo_A 82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV-----------PT- 149 (264)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------TT-
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC-----------CC-
Confidence 999999999654221 11111 1111 123467899999998765321 11
Q ss_pred CCChHHHHHHHHHHHHHHc-----C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 202 GRSPRTDVLLKAEKVILEF-----G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-----~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
...|+.+|...+.+.+.+ + +..++||.+..+-..... ..............+...+|+|++++.++
T Consensus 150 -~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~~~pedvA~~v~~l~ 222 (264)
T 3tfo_A 150 -AAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTIT---HEETMAAMDTYRAIALQPADIARAVRQVI 222 (264)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC--------------------------CCCHHHHHHHHHHHH
T ss_pred -ChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccccc---chhHHHHHHhhhccCCCHHHHHHHHHHHh
Confidence 158999999988776543 3 577899988765322110 00000000001112478999999988764
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.27 E-value=5.7e-11 Score=102.97 Aligned_cols=173 Identities=10% Similarity=-0.089 Sum_probs=106.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hh----CCceeeccCc---c-----------cc
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN----MGITPSLKWT---E-----------AT 140 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~----~~i~~~~~d~---~-----------~~ 140 (272)
.++++|||+ |+||++++++|.++ |++|++++|++++...+ .. ..+..+.+|. + ..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 368999997 99999999999999 99999999987654322 11 1234444443 1 12
Q ss_pred CCCCEEEEecCCCCCCChHHHH-----------HHHH--HHhcC---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLDYPGDV-----------RLAA--LSWNG---EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~~~~~~-----------~~l~--~~~~g---vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
..+|+|||+|+....+++.+.+ +.++ +...+ .+++|++||...|... .+. .
T Consensus 85 g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~ 151 (267)
T 2gdz_A 85 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----------AQQ--P 151 (267)
T ss_dssp SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TTC--H
T ss_pred CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----------CCC--c
Confidence 4689999999976544432221 1222 11222 6799999998765421 112 5
Q ss_pred hHHHHHHHHHHHHHH---------cC--eeEEeeCceecCCCcHH--HHHHHcC-cc---cCCCCcccccccHHHHHHHH
Q 024143 205 PRTDVLLKAEKVILE---------FG--GCVLRLAGLYKADRGAH--VYWLQKG-TV---DSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~---------~~--~~IlRp~~iyG~~~~~~--~~~l~~g-~~---~~~~~~~~~~I~v~Dva~ai 267 (272)
.|+.+|...|.+.+. .+ +.+++|+.+.++..... ......- .. ...+.....+++.+|+|+++
T Consensus 152 ~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v 231 (267)
T 2gdz_A 152 VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGL 231 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHH
Confidence 899999998877653 23 68899999976521100 0000000 00 00011123478999999998
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+.++
T Consensus 232 ~~l~ 235 (267)
T 2gdz_A 232 ITLI 235 (267)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8654
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.8e-10 Score=100.74 Aligned_cols=171 Identities=12% Similarity=-0.027 Sum_probs=104.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-hh----hhhhC--CceeeccCc---c-----------cc
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HD----ELINM--GITPSLKWT---E-----------AT 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~----~l~~~--~i~~~~~d~---~-----------~~ 140 (272)
..+++||||+ |.||++++++|.++ |++|++++|+.++ .+ .+... .+..+..|. + ..
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3478999996 99999999999999 9999999998643 22 12222 234444442 1 13
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-------HHHH---HHh-cCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-------RLAA---LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~---~~~-~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
.++|+|||+|+...... +.+.+ ..+. ... .+.+++|++||...+... ..+.
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~ 175 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA----------VPKH 175 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS----------CSSC
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC----------CCCC
Confidence 47999999998643221 11111 1111 111 256899999997643211 0012
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH---------------HHHHHcCcccCCCCccccc
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH---------------VYWLQKGTVDSRPDHILNL 257 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~---------------~~~l~~g~~~~~~~~~~~~ 257 (272)
..|+.+|...|.+.+.+ + +.+++|+.++++..... ...+.... ......+
T Consensus 176 --~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~p~~r~ 249 (283)
T 1g0o_A 176 --AVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ----WSPLRRV 249 (283)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH----SCTTCSC
T ss_pred --cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhc----CCCCCCC
Confidence 68999999999877643 3 68899999986521110 00011100 1112236
Q ss_pred ccHHHHHHHHHHHh
Q 024143 258 IHYEVNTLVLFIAS 271 (272)
Q Consensus 258 I~v~Dva~ai~~a~ 271 (272)
.+.+|+|++++..+
T Consensus 250 ~~p~dvA~~v~~l~ 263 (283)
T 1g0o_A 250 GLPIDIARVVCFLA 263 (283)
T ss_dssp BCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHh
Confidence 88999999987654
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1e-10 Score=101.17 Aligned_cols=168 Identities=11% Similarity=0.015 Sum_probs=104.0
Q ss_pred CCCeEEEEc-C--cHHHHHHHHHHHhcCCCCeEEEEecCCc---chhhhhh--CCceeeccCc---c----c-------c
Q 024143 83 GENDLLIVG-P--GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN--MGITPSLKWT---E----A-------T 140 (272)
Q Consensus 83 ~~~~IlItG-a--GfiG~~l~~~L~~~~~g~~V~~~~R~~~---~~~~l~~--~~i~~~~~d~---~----~-------~ 140 (272)
..+++|||| + |+||++++++|.++ |++|++++|+++ ..+.+.. ..+..+..|. + . .
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 346899998 4 79999999999999 999999999864 2223322 1244444443 1 1 2
Q ss_pred CCCCEEEEecCCCCC----C---C-----hHHHHH-------HHHHH-hc---CCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRS----L---D-----YPGDVR-------LAALS-WN---GEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~----~---~-----~~~~~~-------~l~~~-~~---gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
.++|+|||+|+.... . + +.+.+. .+... .. ..+++|++||...+...
T Consensus 85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------- 154 (261)
T 2wyu_A 85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV---------- 154 (261)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC----------
T ss_pred CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC----------
Confidence 378999999986431 1 1 111111 11111 11 12589999997654321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHH
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
.+. ..|+.+|...|.+.+.+ + +.+++|+.++++.... ....+.+..+ ...+.+.+|
T Consensus 155 -~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~d 225 (261)
T 2wyu_A 155 -PKY--NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAP------LRRNITQEE 225 (261)
T ss_dssp -TTC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHST------TSSCCCHHH
T ss_pred -CCc--hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCC------CCCCCCHHH
Confidence 112 57999999999877653 3 6889999999874221 1111222111 123678999
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|++++.++
T Consensus 226 va~~v~~l~ 234 (261)
T 2wyu_A 226 VGNLGLFLL 234 (261)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999987654
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.26 E-value=3.8e-11 Score=105.19 Aligned_cols=165 Identities=9% Similarity=0.030 Sum_probs=103.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C---CceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M---GITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~---~i~~~~~d~---~-----------~ 139 (272)
+..++++|||+ |+||++++++|.++ |++|++++|++++.+.+.. . .+..+..|. + .
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 103 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 103 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 34578999997 99999999999999 9999999998766544321 1 244444443 1 1
Q ss_pred cCCCCEEEEe-cCCCCC---C-C---hHHHH-------HHH----HH-HhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFC-APPSRS---L-D---YPGDV-------RLA----AL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 140 ~~~~D~Vi~~-a~~~~~---~-~---~~~~~-------~~l----~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
..++|+|||+ ++.... + + +.+.+ ..+ +. ...+.+++|++||...+... .
T Consensus 104 ~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 172 (286)
T 1xu9_A 104 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY-----------P 172 (286)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC-----------T
T ss_pred cCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC-----------C
Confidence 2479999999 454321 1 1 11111 111 10 01234799999998754321 1
Q ss_pred CCCCChHHHHHHHHHHHHHH----c-----C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILE----F-----G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~----~-----~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
+. +.|+.+|...|.+.+. + + +++++||.+..+. ...... +.....+++.+|+|+.++
T Consensus 173 ~~--~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~----~~~~~~------~~~~~~~~~~~~vA~~i~ 240 (286)
T 1xu9_A 173 MV--AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET----AMKAVS------GIVHMQAAPKEECALEII 240 (286)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH----HHHHSC------GGGGGGCBCHHHHHHHHH
T ss_pred Cc--cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh----HHHhcc------ccccCCCCCHHHHHHHHH
Confidence 22 6899999998876643 2 3 5789999886432 111111 112245788999999988
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
.++
T Consensus 241 ~~~ 243 (286)
T 1xu9_A 241 KGG 243 (286)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.26 E-value=7.1e-11 Score=102.02 Aligned_cols=168 Identities=10% Similarity=-0.001 Sum_probs=106.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D 144 (272)
..++++|||+ |.||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + ...++|
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEG--GAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3478999996 99999999999999 9999999998776654432 2344444443 1 234799
Q ss_pred EEEEecCCCCCCC--------hHHHHH-------HHHH-Hh---cCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCh
Q 024143 145 YVIFCAPPSRSLD--------YPGDVR-------LAAL-SW---NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~~-------~l~~-~~---~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~ 205 (272)
++||+|+...... +.+.+. .+.. .. ....++|++||...+... .+. ..
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~ 151 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH-----------PGM--SV 151 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC-----------TTB--HH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-----------CCc--hH
Confidence 9999998754221 111111 1111 11 123589999998765421 112 68
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc-----H-HH----HHHHcCcccCCCCcccccccHHHHHHH
Q 024143 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-----A-HV----YWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 206 y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~-----~-~~----~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
|+.+|...|.+.+.+ + +..++||.+..+... . .. ....+.. ....+...+|+|++
T Consensus 152 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~pedvA~~ 225 (255)
T 4eso_A 152 YSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNIT------PMKRNGTADEVARA 225 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHS------TTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccC------CCCCCcCHHHHHHH
Confidence 999999998877643 3 678999999887421 1 00 0111111 12236788999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 226 v~~L~ 230 (255)
T 4eso_A 226 VLFLA 230 (255)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 87543
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.5e-10 Score=100.39 Aligned_cols=171 Identities=8% Similarity=0.010 Sum_probs=106.3
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h-C---CceeeccCc---c-----------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N-M---GITPSLKWT---E----------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~-~---~i~~~~~d~---~----------- 138 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++++.+.+. . . .+..+..|. +
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 44578999996 99999999999999 999999999876554322 1 1 244444443 1
Q ss_pred ccCCCCEEEEecCCCCCC---C-----hHHHHH-H------H----H--HHhcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRSL---D-----YPGDVR-L------A----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~---~-----~~~~~~-~------l----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
....+|++||+|+..... + +.+.+. + + + +...+..++|++||...+...
T Consensus 84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 153 (265)
T 3lf2_A 84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE---------- 153 (265)
T ss_dssp HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC----------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC----------
Confidence 234799999999864321 1 111111 1 1 1 123456789999998754321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH--------------HHHHcCcccCCCCcc
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV--------------YWLQKGTVDSRPDHI 254 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~--------------~~l~~g~~~~~~~~~ 254 (272)
.. ...|+.+|...+.+.+.+ + +..++||.+..+...... ..+... .....
T Consensus 154 -~~--~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~p~ 226 (265)
T 3lf2_A 154 -PH--MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARN----KQIPL 226 (265)
T ss_dssp -TT--BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHH----TTCTT
T ss_pred -CC--chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhc----cCCCc
Confidence 11 268999999999877653 3 578999999764211100 001110 00122
Q ss_pred cccccHHHHHHHHHHHh
Q 024143 255 LNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 255 ~~~I~v~Dva~ai~~a~ 271 (272)
..+...+|+|++++..+
T Consensus 227 ~r~~~pedvA~~v~fL~ 243 (265)
T 3lf2_A 227 GRLGKPIEAARAILFLA 243 (265)
T ss_dssp CSCBCHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHh
Confidence 34678999999987654
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.5e-10 Score=101.32 Aligned_cols=172 Identities=10% Similarity=-0.060 Sum_probs=95.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec-CCcchhh----hhhC--CceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDE----LINM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~~~----l~~~--~i~~~~~d~---~-----------~~~ 141 (272)
.+++||||+ |.||++++++|.++ |++|++++| ++++.+. +... .+..+..|. + ...
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAAS--GFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 467999996 99999999999999 999999986 4443332 2222 344444443 1 124
Q ss_pred CCCEEEEecCCC--CCCC--------hHH-------HH----HHHH--HHhcC---CCeEEEEecceeecCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPS--RSLD--------YPG-------DV----RLAA--LSWNG---EGSFLFTSSSAIYDCSDNGACDED 195 (272)
Q Consensus 142 ~~D~Vi~~a~~~--~~~~--------~~~-------~~----~~l~--~~~~g---vkr~V~~SS~~vYg~~~~~~~~E~ 195 (272)
++|++||+|+.. .... +.+ .. +.++ ....+ ..++|++||...+...
T Consensus 107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-------- 178 (280)
T 4da9_A 107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS-------- 178 (280)
T ss_dssp CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------------
T ss_pred CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC--------
Confidence 899999999862 1110 111 00 1111 11222 5699999998765321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
.+. ..|+.+|...|.+.+.+ + +..++||.+..+.......... ............+...+|+|++
T Consensus 179 ---~~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~p~~r~~~pedvA~~ 252 (280)
T 4da9_A 179 ---PER--LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYD-GLIESGLVPMRRWGEPEDIGNI 252 (280)
T ss_dssp ----CC--HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------CCBCHHHHHHH
T ss_pred ---CCc--cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHH-HHHhhcCCCcCCcCCHHHHHHH
Confidence 111 58999999999877643 2 6789999998764322110000 0000001223346789999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 253 v~~L~ 257 (280)
T 4da9_A 253 VAGLA 257 (280)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87654
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=2.8e-10 Score=96.62 Aligned_cols=163 Identities=12% Similarity=0.030 Sum_probs=102.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-------hCCceeeccCc---c----c-------cC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSLKWT---E----A-------TQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-------~~~i~~~~~d~---~----~-------~~ 141 (272)
|+++||||+ |.||++++++|.++ |++|++++|++++.+.+. ...+..+.+|. + . ..
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARD--GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 678999996 99999999999999 999999999876654332 12344444443 1 1 23
Q ss_pred CCCEEEEecCCCCCCC--------hHHHHH-------HHH---HH--hcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDVR-------LAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~~-------~l~---~~--~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
++|++||+|+...... +.+.+. .+. .. ..+..++|++||...+... |.
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~------------~~ 147 (235)
T 3l77_A 80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI------------PY 147 (235)
T ss_dssp SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC------------TT
T ss_pred CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC------------CC
Confidence 7999999998643211 111110 111 00 1234677777776543211 11
Q ss_pred CCChHHHHHHHHHHHHHHc-----C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 202 GRSPRTDVLLKAEKVILEF-----G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-----~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
...|+.+|+..|.+.+.+ + +..++||.+..+-... . ........++..+|+|++++..+
T Consensus 148 -~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~--------~--~~~~~~~~~~~p~dva~~v~~l~ 213 (235)
T 3l77_A 148 -GGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGS--------K--PGKPKEKGYLKPDEIAEAVRCLL 213 (235)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTC--------C--SCCCGGGTCBCHHHHHHHHHHHH
T ss_pred -cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccc--------c--CCcccccCCCCHHHHHHHHHHHH
Confidence 158999999999887754 3 6789999886543110 0 01112235788999999988765
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.25 E-value=3e-10 Score=97.81 Aligned_cols=164 Identities=8% Similarity=-0.058 Sum_probs=102.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---------CCceeeccCc---c-----------
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---------MGITPSLKWT---E----------- 138 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---------~~i~~~~~d~---~----------- 138 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. +
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATD--GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHH--TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 3468999997 99999999999999 9999999998766544321 2234444443 1
Q ss_pred ccCCCCEEEEecCCCCCC--C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRSL--D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~--~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
....+|++||+|+..... + +.+.+ +.++ +...+..++|++||...+...
T Consensus 84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 152 (250)
T 3nyw_A 84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF----------- 152 (250)
T ss_dssp HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC-----------
Confidence 134799999999864321 1 11111 1111 123467899999997754211
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
.+. ..|+.+|...+.+.+.+ + +..++||.+..+ +...... ......++..+|+|++++.
T Consensus 153 ~~~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~----~~~~~~~------~~~~~~~~~p~dva~~v~~ 220 (250)
T 3nyw_A 153 ADG--GIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD----MAKKAGT------PFKDEEMIQPDDLLNTIRC 220 (250)
T ss_dssp CCT--THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH----HHHHTTC------CSCGGGSBCHHHHHHHHHH
T ss_pred CCC--cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc----hhhhcCC------CcccccCCCHHHHHHHHHH
Confidence 122 68999999988776643 3 577899988542 2211111 1122347899999999877
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
.+
T Consensus 221 l~ 222 (250)
T 3nyw_A 221 LL 222 (250)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.2e-10 Score=102.19 Aligned_cols=175 Identities=12% Similarity=-0.007 Sum_probs=106.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C--CceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~--~i~~~~~d~---~-----------~~~~ 142 (272)
.+++||||+ |.||++++++|.++ |++|++++|+.++.+.+.. . .+..+..|. + ...+
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAAD--GVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 467999996 99999999999999 9999999998766544321 1 233444443 1 1348
Q ss_pred CCEEEEecCCCCC----CC-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRS----LD-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 143 ~D~Vi~~a~~~~~----~~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
+|++||+|+.... .+ +.+.+ +.++ +...+.+++|++||...+... +..+
T Consensus 106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------~~~~ 176 (283)
T 3v8b_A 106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF---------TTPG 176 (283)
T ss_dssp CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC---------CSTT
T ss_pred CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC---------CCCC
Confidence 9999999996421 11 11111 1111 123467899999997754211 0112
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH--HHHHcCcc---cCCCCcc--cccccHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV--YWLQKGTV---DSRPDHI--LNLIHYEVNT 264 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~--~~l~~g~~---~~~~~~~--~~~I~v~Dva 264 (272)
...|+.+|...|.+.+.+ + +..++||.+..+...... .......+ ....... ..+...+|+|
T Consensus 177 --~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA 254 (283)
T 3v8b_A 177 --ATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVA 254 (283)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHH
T ss_pred --chHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHH
Confidence 268999999999877653 2 578999999876422110 00000000 0111111 3467889999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
++++..+
T Consensus 255 ~~v~fL~ 261 (283)
T 3v8b_A 255 ELIRFLV 261 (283)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9987654
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.3e-10 Score=99.51 Aligned_cols=167 Identities=11% Similarity=-0.015 Sum_probs=103.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE-e--cCCcchhhhhhC--CceeeccC-c--------cccCCCCEEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-T--MTADHHDELINM--GITPSLKW-T--------EATQKFPYVIF 148 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~-~--R~~~~~~~l~~~--~i~~~~~d-~--------~~~~~~D~Vi~ 148 (272)
+++++|||+ |.||++++++|.++ |++|+++ + |++++.+.+... +.+....+ . +...++|+|||
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lv~ 78 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQD--GYTVVCHDASFADAAERQRFESENPGTIALAEQKPERLVDATLQHGEAIDTIVS 78 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHSTTEEECCCCCGGGHHHHHGGGSSCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCcCCHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 368999996 99999999999999 9999999 6 887665543221 32222111 1 12347899999
Q ss_pred ecCCCCC---C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 149 CAPPSRS---L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 149 ~a~~~~~---~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
+|+.... . + +.+.+ +.++ +...+.+++|++||...+... .+. .
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~--~ 145 (244)
T 1zmo_A 79 NDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL-----------AYN--P 145 (244)
T ss_dssp CCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTC--T
T ss_pred CCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC-----------CCc--h
Confidence 9986432 1 1 11111 1111 123467899999998765321 112 5
Q ss_pred hHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCC---cHHH-----HHHHc-CcccCCCCcccccccHHHHHHH
Q 024143 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADR---GAHV-----YWLQK-GTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~---~~~~-----~~l~~-g~~~~~~~~~~~~I~v~Dva~a 266 (272)
.|+.+|...|.+.+.+ + +.+++|+.+..+.. .... ..+.+ ..+ ...+...+|+|++
T Consensus 146 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pe~vA~~ 219 (244)
T 1zmo_A 146 LYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVP------LGRLGRPDEMGAL 219 (244)
T ss_dssp THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCT------TCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCC------CCCCcCHHHHHHH
Confidence 7999999998876653 3 67899999877643 2110 01111 111 1236788999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++.++
T Consensus 220 v~~l~ 224 (244)
T 1zmo_A 220 ITFLA 224 (244)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 87654
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=5.6e-11 Score=102.89 Aligned_cols=168 Identities=4% Similarity=-0.096 Sum_probs=104.2
Q ss_pred CCCeEEEEcC-cH--HHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---C----CceeeccCc---c-----------
Q 024143 83 GENDLLIVGP-GV--LGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---M----GITPSLKWT---E----------- 138 (272)
Q Consensus 83 ~~~~IlItGa-Gf--iG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~----~i~~~~~d~---~----------- 138 (272)
..+++||||+ |+ ||++++++|.++ |++|++++|+....+.+.. . .+..+..|. +
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 3478999996 99 999999999999 9999999998644332221 1 345555553 1
Q ss_pred ccCCCCEEEEecCCCCC----CC--------hHHHHH-------HHHH-H---hcCCCeEEEEecceeecCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRS----LD--------YPGDVR-------LAAL-S---WNGEGSFLFTSSSAIYDCSDNGACDED 195 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~----~~--------~~~~~~-------~l~~-~---~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (272)
....+|++||+|+.... .. +...+. .+.. . .....++|++||...+...
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-------- 155 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM-------- 155 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC--------
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC--------
Confidence 12479999999986431 11 111111 1111 1 1123589999998754321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc------HHHHHHHcCcccCCCCcccccccH
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG------AHVYWLQKGTVDSRPDHILNLIHY 260 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~------~~~~~l~~g~~~~~~~~~~~~I~v 260 (272)
.. ...|+.+|...|.+.+.+ + +..++||.+..+... .....+....+ ...+...
T Consensus 156 ---~~--~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~------~~~~~~p 224 (266)
T 3oig_A 156 ---PN--YNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAP------LRRTTTP 224 (266)
T ss_dssp ---TT--THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHST------TSSCCCH
T ss_pred ---CC--cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCC------CCCCCCH
Confidence 11 258999999998877643 3 678999999875321 11111221111 1236788
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|++++..+
T Consensus 225 ~dva~~v~~l~ 235 (266)
T 3oig_A 225 EEVGDTAAFLF 235 (266)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 99999987654
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.24 E-value=2e-10 Score=100.79 Aligned_cols=169 Identities=9% Similarity=-0.083 Sum_probs=102.5
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-cchhhhh-----hC--Cceeecc---C----cc-------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELI-----NM--GITPSLK---W----TE------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~~~l~-----~~--~i~~~~~---d----~~------- 138 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++ ++...+. .. .+..+.. | .+
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQT--GYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN 98 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHH--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence 34478999996 99999999999999 99999999987 5443221 11 2333333 3 21
Q ss_pred ----ccCCCCEEEEecCCCCCCCh--------------HHHHH---------------HHHH--HhcC------CCeEEE
Q 024143 139 ----ATQKFPYVIFCAPPSRSLDY--------------PGDVR---------------LAAL--SWNG------EGSFLF 177 (272)
Q Consensus 139 ----~~~~~D~Vi~~a~~~~~~~~--------------~~~~~---------------~l~~--~~~g------vkr~V~ 177 (272)
...++|+|||+|+......+ .+... .++. ...+ ..++|+
T Consensus 99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~ 178 (288)
T 2x9g_A 99 SCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVN 178 (288)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEE
T ss_pred HHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE
Confidence 12479999999985321101 01111 0110 1222 569999
Q ss_pred EecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc-H-HHHHHHcCc
Q 024143 178 TSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-A-HVYWLQKGT 246 (272)
Q Consensus 178 ~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~-~-~~~~l~~g~ 246 (272)
+||...|... .+. ..|+.+|...+.+.+.+ + +.+++|+.++++... + ....+....
T Consensus 179 isS~~~~~~~-----------~~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~ 245 (288)
T 2x9g_A 179 LCDAMVDQPC-----------MAF--SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKV 245 (288)
T ss_dssp ECCTTTTSCC-----------TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCTTSCHHHHHHHHHTC
T ss_pred EecccccCCC-----------CCC--chHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCccccChHHHHHHHhhC
Confidence 9998764321 112 58999999888776643 3 678999999987511 1 111122212
Q ss_pred ccCCCCccccc-ccHHHHHHHHHHHh
Q 024143 247 VDSRPDHILNL-IHYEVNTLVLFIAS 271 (272)
Q Consensus 247 ~~~~~~~~~~~-I~v~Dva~ai~~a~ 271 (272)
+. ..+ ...+|+|++++.++
T Consensus 246 p~------~r~~~~pedvA~~v~~l~ 265 (288)
T 2x9g_A 246 PL------GRREASAEQIADAVIFLV 265 (288)
T ss_dssp TT------TSSCCCHHHHHHHHHHHH
T ss_pred CC------CCCCCCHHHHHHHHHHHh
Confidence 11 124 68899999988664
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-10 Score=102.91 Aligned_cols=175 Identities=11% Similarity=0.017 Sum_probs=104.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc--chhhh----hhC--CceeeccCc---c-----------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD--HHDEL----INM--GITPSLKWT---E----------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~--~~~~l----~~~--~i~~~~~d~---~----------- 138 (272)
+..+++||||+ |.||++++++|.++ |++|++++|+.+ ..+.+ ... .+..+..|. +
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 34578999996 99999999999999 999999988632 22221 112 234444443 1
Q ss_pred ccCCCCEEEEecCCCCC-CC--------hHHHHH-------HHHH-H-h--cCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRS-LD--------YPGDVR-------LAAL-S-W--NGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~-~~--------~~~~~~-------~l~~-~-~--~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
...++|++||+|+.... .. +.+.+. .+.. . . ....++|++||...|...
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~----------- 193 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS----------- 193 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC-----------
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC-----------
Confidence 13589999999996431 11 111111 1111 1 1 123599999998876421
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
.+. ..|+.+|...|.+.+.+ + +..++|+.++++........-..-...........+...+|+|++++.
T Consensus 194 ~~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~ 271 (294)
T 3r3s_A 194 PHL--LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVY 271 (294)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHH
T ss_pred CCc--hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 112 58999999998877643 3 678999999875310000000000001122233446788999998876
Q ss_pred Hh
Q 024143 270 AS 271 (272)
Q Consensus 270 a~ 271 (272)
.+
T Consensus 272 L~ 273 (294)
T 3r3s_A 272 LA 273 (294)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.24 E-value=1e-10 Score=102.40 Aligned_cols=167 Identities=11% Similarity=-0.060 Sum_probs=103.6
Q ss_pred CCeEEEEcC---cHHHHHHHHHHHhcCCCCeEEEEecCCc---chhhhhh--CCceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN--MGITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa---GfiG~~l~~~L~~~~~g~~V~~~~R~~~---~~~~l~~--~~i~~~~~d~---~-----------~~~ 141 (272)
.+++||||+ |+||++++++|.++ |++|++++|+++ ....+.. ..+..+..|. + ...
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHRE--GAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 368999984 79999999999999 999999999874 2222322 1234444443 1 134
Q ss_pred CCCEEEEecCCCCC----C---C-----hHHHH-------HHHHH---H--hcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS----L---D-----YPGDV-------RLAAL---S--WNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~----~---~-----~~~~~-------~~l~~---~--~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
++|+|||+|+.... . + +.+.+ ..+.. . ....+++|++||...+...
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 168 (285)
T 2p91_A 99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV---------- 168 (285)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC----------
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC----------
Confidence 79999999986431 1 1 11111 11111 1 1123799999997654321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHH
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
.+ ...|+.+|...|.+.+.+ + +.+++|+.++++.... ....+....+. ..+.+.+|
T Consensus 169 -~~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~d 239 (285)
T 2p91_A 169 -PH--YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF------GKPITIED 239 (285)
T ss_dssp -TT--TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT------SSCCCHHH
T ss_pred -CC--ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC------CCCcCHHH
Confidence 11 258999999999877643 3 6889999999875321 11111111111 23678999
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|++++.++
T Consensus 240 va~~~~~l~ 248 (285)
T 2p91_A 240 VGDTAVFLC 248 (285)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 999988764
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=3e-11 Score=104.74 Aligned_cols=166 Identities=10% Similarity=-0.051 Sum_probs=102.3
Q ss_pred CeEEEEc-C--cHHHHHHHHHHHhcCCCCeEEEEecCCc---chhhhhhC--CceeeccCc---c-----------ccCC
Q 024143 85 NDLLIVG-P--GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELINM--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 85 ~~IlItG-a--GfiG~~l~~~L~~~~~g~~V~~~~R~~~---~~~~l~~~--~i~~~~~d~---~-----------~~~~ 142 (272)
+++|||| + |+||++++++|.++ |++|++++|++. ..+.+... ....+..|. + ...+
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 87 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 6799998 4 79999999999999 999999999862 22222211 223333442 1 1237
Q ss_pred CCEEEEecCCCCC----CC---------hHHHH-------HHHHH-Hhc---CCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRS----LD---------YPGDV-------RLAAL-SWN---GEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 143 ~D~Vi~~a~~~~~----~~---------~~~~~-------~~l~~-~~~---gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
+|+|||+|+.... .. +.+.+ ..+.. ... ..+++|++||...|...
T Consensus 88 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------- 156 (265)
T 1qsg_A 88 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI----------- 156 (265)
T ss_dssp EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----------
T ss_pred CCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC-----------
Confidence 8999999986431 11 11111 11111 111 12589999997754321
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEVN 263 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~Dv 263 (272)
.+. ..|+.+|...|.+.+.+ + +.++||+.++++.... ....+.++.+ ...+.+.+|+
T Consensus 157 ~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~dv 228 (265)
T 1qsg_A 157 PNY--NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTP------IRRTVTIEDV 228 (265)
T ss_dssp TTT--THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHST------TSSCCCHHHH
T ss_pred CCc--hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCC------CCCCCCHHHH
Confidence 112 58999999999877643 3 6789999999875321 1111222111 1236789999
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
|++++.++
T Consensus 229 a~~v~~l~ 236 (265)
T 1qsg_A 229 GNSAAFLC 236 (265)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99988764
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.23 E-value=3.9e-10 Score=101.08 Aligned_cols=168 Identities=11% Similarity=-0.116 Sum_probs=104.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEe-cCCcchhhhhh-------CCceeeccCc---c-------------
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDELIN-------MGITPSLKWT---E------------- 138 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~-R~~~~~~~l~~-------~~i~~~~~d~---~------------- 138 (272)
.+++||||+ |.||++++++|.++ |++|++++ |++++.+.+.. ..+..+..|. +
T Consensus 46 ~k~~lVTGas~GIG~aia~~La~~--G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 46 VPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 468999996 99999999999999 99999999 88665443211 1233333332 1
Q ss_pred ----c-----------cCCCCEEEEecCCCCCCC---h---------------HHHHH---------------HHH--HH
Q 024143 139 ----A-----------TQKFPYVIFCAPPSRSLD---Y---------------PGDVR---------------LAA--LS 168 (272)
Q Consensus 139 ----~-----------~~~~D~Vi~~a~~~~~~~---~---------------~~~~~---------------~l~--~~ 168 (272)
. ...+|+|||+|+...... . .+... .++ +.
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 203 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 203 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 137999999998532111 0 11111 111 12
Q ss_pred hcC------CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 169 WNG------EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 169 ~~g------vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
..+ .+++|++||...+... .+ ...|+.+|...|.+.+.+ + +.+++||.+..+
T Consensus 204 ~~~~~~~~~~g~IV~isS~~~~~~~-----------~~--~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 270 (328)
T 2qhx_A 204 GTPAKHRGTNYSIINMVDAMTNQPL-----------LG--YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 270 (328)
T ss_dssp HSCGGGSCSCEEEEEECCTTTTSCC-----------TT--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred hcCCcCCCCCcEEEEECchhhccCC-----------CC--cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCC
Confidence 334 6799999998754311 11 258999999999877653 3 678999999887
Q ss_pred CCc-H-HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 234 DRG-A-HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 234 ~~~-~-~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
... + ....+....+.+ ..+...+|+|++++.++
T Consensus 271 ~~~~~~~~~~~~~~~p~~-----~r~~~pedvA~~v~~l~ 305 (328)
T 2qhx_A 271 DDMPPAVWEGHRSKVPLY-----QRDSSAAEVSDVVIFLC 305 (328)
T ss_dssp CCSCHHHHHHHHTTCTTT-----TSCBCHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHhhCCCC-----CCCCCHHHHHHHHHHHh
Confidence 521 1 111122222111 03678999999988765
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.9e-12 Score=116.11 Aligned_cols=142 Identities=11% Similarity=0.066 Sum_probs=88.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCC-------eEEEEecCCc--chh----hhhhCCce--eec---cC-ccccCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTAD--HHD----ELINMGIT--PSL---KW-TEATQKFP 144 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~-------~V~~~~R~~~--~~~----~l~~~~i~--~~~---~d-~~~~~~~D 144 (272)
+||+|||+ ||||++++..|+++ |+ +|+.+++.+. +.. .+....+. ... .+ .++++++|
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~--g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~D 82 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG--EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDAD 82 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCCC
Confidence 58999996 99999999999998 86 8999988641 111 12211111 111 11 14678999
Q ss_pred EEEEecCCCCC-CC----h----HHHHHHHHH--HhcC-CC-eEEEEecce-eecCCCCCCCC-CCC-CCCCCCCChHHH
Q 024143 145 YVIFCAPPSRS-LD----Y----PGDVRLAAL--SWNG-EG-SFLFTSSSA-IYDCSDNGACD-EDS-PVVPIGRSPRTD 208 (272)
Q Consensus 145 ~Vi~~a~~~~~-~~----~----~~~~~~l~~--~~~g-vk-r~V~~SS~~-vYg~~~~~~~~-E~~-p~~p~~~~~y~~ 208 (272)
+|||+|+.... .. + ...+.+++. .+.+ ++ +++++|+.. +. .++. |.. +..|. +.|+.
T Consensus 83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~-----~~~~~~~~~~~~p~--~~yg~ 155 (327)
T 1y7t_A 83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN-----ALIAYKNAPGLNPR--NFTAM 155 (327)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH-----HHHHHHTCTTSCGG--GEEEC
T ss_pred EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh-----HHHHHHHcCCCChh--heecc
Confidence 99999996542 11 1 222333331 2333 54 777777643 11 1111 222 23344 57999
Q ss_pred HHHHHHHHHHHc----C--eeEEeeCceecCCC
Q 024143 209 VLLKAEKVILEF----G--GCVLRLAGLYKADR 235 (272)
Q Consensus 209 sk~~aE~~l~~~----~--~~IlRp~~iyG~~~ 235 (272)
+|+.+|++...+ + .+++|+.++||+..
T Consensus 156 tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 156 TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp CHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred chHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence 999999977653 3 78999999999864
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=2.7e-10 Score=98.77 Aligned_cols=168 Identities=11% Similarity=-0.071 Sum_probs=104.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEe-cCCcchhh----hhhC--CceeeccCc---c-----------cc
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDE----LINM--GITPSLKWT---E-----------AT 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~-R~~~~~~~----l~~~--~i~~~~~d~---~-----------~~ 140 (272)
+.+++||||+ |.||++++++|.++ |++|+++. |+.++... +... .+..+..|. + ..
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAAD--GFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4468999996 99999999999999 99997765 44433322 2222 344444443 1 12
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-------HHHH-------HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-------RLAA-------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~-------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
..+|+|||+|+...... +.+.+ ..+. ....+..++|++||...+...
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 171 (267)
T 4iiu_A 103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN----------- 171 (267)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC-----------
T ss_pred CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC-----------
Confidence 48999999998654221 11111 1111 114567899999998765321
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH---HHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA---HVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~---~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
.+. ..|+.+|...+.+.+.+ + +.+++||.+..+.... ....+....+ ...+...+|+|++
T Consensus 172 ~~~--~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p------~~~~~~~edva~~ 243 (267)
T 4iiu_A 172 RGQ--VNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIP------MKRMGQAEEVAGL 243 (267)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCT------TCSCBCHHHHHHH
T ss_pred CCC--chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCC------CCCCcCHHHHHHH
Confidence 112 68999999877766543 3 6789999999875321 1112222222 2236789999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 244 ~~~L~ 248 (267)
T 4iiu_A 244 ASYLM 248 (267)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87654
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.2e-10 Score=101.34 Aligned_cols=171 Identities=9% Similarity=0.000 Sum_probs=105.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--CCceeeccCc---c-----------ccCCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--~~i~~~~~d~---~-----------~~~~~D 144 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. .++..+..|. + ...++|
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 84 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLD 84 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 34478999996 99999999999999 9999999998766554432 1344444543 1 124799
Q ss_pred EEEEecCCCCC-CC--------hHHHH-------HHHH---HH--hcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRS-LD--------YPGDV-------RLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~-~~--------~~~~~-------~~l~---~~--~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
+|||+|+.... .. +.+.+ ..+. .. ..+.+++|++||...+.... . .
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~ 151 (270)
T 1yde_A 85 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA-----------Q--A 151 (270)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT-----------T--C
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC-----------C--C
Confidence 99999986431 11 11111 0111 00 11258999999976432110 1 1
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH-------HHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH-------VYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~-------~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
..|+.+|...|.+.+.+ + +.++||+.++++..... ...+.... .......+...+|+|+++
T Consensus 152 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---~~~p~~r~~~p~dva~~v 228 (270)
T 1yde_A 152 VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGM---LAQPLGRMGQPAEVGAAA 228 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHH---HTSTTSSCBCHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHh---hcCCCCCCcCHHHHHHHH
Confidence 58999999999877653 3 68899999997631110 00011000 001112367889999987
Q ss_pred HHH
Q 024143 268 FIA 270 (272)
Q Consensus 268 ~~a 270 (272)
+..
T Consensus 229 ~~L 231 (270)
T 1yde_A 229 VFL 231 (270)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.21 E-value=8.2e-10 Score=96.29 Aligned_cols=174 Identities=15% Similarity=0.051 Sum_probs=104.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC-------------Ccchhh----hhhC--CceeeccCc---c-
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-------------ADHHDE----LINM--GITPSLKWT---E- 138 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~-------------~~~~~~----l~~~--~i~~~~~d~---~- 138 (272)
..+++||||+ |.||++++++|.++ |++|++++|. .++... +... .+..+..|. +
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 4478999996 99999999999999 9999999983 222221 1111 233444443 1
Q ss_pred ----------ccCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecC
Q 024143 139 ----------ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDC 186 (272)
Q Consensus 139 ----------~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~ 186 (272)
....+|++||+|+...... +.+.+ +.++ +...+ ..++|++||...+..
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 167 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM 167 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence 1347999999998654321 11111 1111 11223 569999999876532
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-HH----HHHHcCc-c--cC
Q 024143 187 SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-HV----YWLQKGT-V--DS 249 (272)
Q Consensus 187 ~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-~~----~~l~~g~-~--~~ 249 (272)
. .. ...|+.+|...+.+.+.+ + +..++||.+..+.... .. ....... . ..
T Consensus 168 ~-----------~~--~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (277)
T 3tsc_A 168 Q-----------PF--MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVL 234 (277)
T ss_dssp C-----------SS--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTT
T ss_pred C-----------CC--chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHh
Confidence 1 01 258999999999877653 3 5789999998764321 11 0111111 1 01
Q ss_pred CCCcccccccHHHHHHHHHHHh
Q 024143 250 RPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 250 ~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
......-+.+.+|+|++++..+
T Consensus 235 ~~~~p~r~~~pedvA~~v~~L~ 256 (277)
T 3tsc_A 235 TPFLPDWVAEPEDIADTVCWLA 256 (277)
T ss_dssp CCSSSCSCBCHHHHHHHHHHHH
T ss_pred hhccCCCCCCHHHHHHHHHHHh
Confidence 1111123789999999987654
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=2.5e-10 Score=100.81 Aligned_cols=169 Identities=9% Similarity=-0.034 Sum_probs=105.3
Q ss_pred cCCCeEEEEcC-c--HHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-G--fiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~---~-----------~ 139 (272)
+..+++||||+ | .||++++++|.++ |++|++++|+++..+.+.. ..+..+.+|. + .
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34578999997 6 9999999999999 9999999998654333221 1234444443 1 1
Q ss_pred cCCCCEEEEecCCCCC----C---C-----hHHHHH-------HHHH-Hh---cCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRS----L---D-----YPGDVR-------LAAL-SW---NGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~----~---~-----~~~~~~-------~l~~-~~---~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
..++|++||+|+.... . + +.+.+. .+.. .. ....++|++||...+...
T Consensus 106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~--------- 176 (296)
T 3k31_A 106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV--------- 176 (296)
T ss_dssp HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC---------
T ss_pred cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC---------
Confidence 3479999999986531 1 1 111111 1111 11 124589999998754321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH------HHHHHcCcccCCCCcccccccHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH------VYWLQKGTVDSRPDHILNLIHYE 261 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~------~~~l~~g~~~~~~~~~~~~I~v~ 261 (272)
.. ...|+.+|...+.+.+.+ + +..++||.++.+..... ..++....+. ..+...+
T Consensus 177 --~~--~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pe 246 (296)
T 3k31_A 177 --PH--YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL------RRNTTLD 246 (296)
T ss_dssp --TT--TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT------SSCCCHH
T ss_pred --CC--chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC------CCCCCHH
Confidence 11 268999999999877653 3 67899999998753211 1112222221 2356789
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++..+
T Consensus 247 dvA~~v~fL~ 256 (296)
T 3k31_A 247 DVGGAALYLL 256 (296)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9999987654
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.8e-10 Score=100.73 Aligned_cols=167 Identities=8% Similarity=-0.043 Sum_probs=105.3
Q ss_pred CCeEEEEcC-cH--HHHHHHHHHHhcCCCCeEEEEecCC--cchhhhhhC--CceeeccCc---c-----------ccCC
Q 024143 84 ENDLLIVGP-GV--LGRLVAEQWRQEHPGCQIYGQTMTA--DHHDELINM--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 84 ~~~IlItGa-Gf--iG~~l~~~L~~~~~g~~V~~~~R~~--~~~~~l~~~--~i~~~~~d~---~-----------~~~~ 142 (272)
.+++||||+ |+ ||++++++|.++ |++|++++|+. +..+.+... .+..+.+|. + ....
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 103 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHRE--GAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG 103 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHc--CCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 468999996 88 999999999999 99999999987 333333221 244444553 1 2357
Q ss_pred CCEEEEecCCCCC----CC---------hHHHHH-------HHH---H--HhcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRS----LD---------YPGDVR-------LAA---L--SWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 143 ~D~Vi~~a~~~~~----~~---------~~~~~~-------~l~---~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
+|+|||+|+.... .. +.+.+. .+. . -.....++|++||...+...
T Consensus 104 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 173 (280)
T 3nrc_A 104 LDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM---------- 173 (280)
T ss_dssp CCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC----------
T ss_pred CCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC----------
Confidence 8999999996532 11 111110 111 0 11235799999998764321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHH
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
.+ ...|+.+|...|.+.+.+ + +..++|+.+..+.... .........+ ...+...+|
T Consensus 174 -~~--~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------~~~~~~ped 244 (280)
T 3nrc_A 174 -PS--YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSP------LKKNVDIME 244 (280)
T ss_dssp -TT--THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHST------TCSCCCHHH
T ss_pred -CC--chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCC------CCCCCCHHH
Confidence 11 268999999998877643 3 6789999998764221 1111111111 123677899
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|++++..+
T Consensus 245 vA~~v~~l~ 253 (280)
T 3nrc_A 245 VGNTVAFLC 253 (280)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999987654
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.19 E-value=8.8e-10 Score=96.92 Aligned_cols=170 Identities=10% Similarity=-0.001 Sum_probs=104.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCC---eEEEEecCCcchhhhhh--------CCceeeccCc---c---------
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGC---QIYGQTMTADHHDELIN--------MGITPSLKWT---E--------- 138 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~---~V~~~~R~~~~~~~l~~--------~~i~~~~~d~---~--------- 138 (272)
..+++||||+ |.||++++++|.++ |+ +|+...|+.++.+.+.. ..+..+.+|. +
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~--G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEA--SNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHH--HTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred CCCEEEEecCCChHHHHHHHHHHHc--CCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3478999997 99999999999999 87 99999998776554321 1233344442 1
Q ss_pred --ccCCCCEEEEecCCCC-C---CC-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCC
Q 024143 139 --ATQKFPYVIFCAPPSR-S---LD-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDE 194 (272)
Q Consensus 139 --~~~~~D~Vi~~a~~~~-~---~~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E 194 (272)
...++|+|||+|+... . .+ +.+.+ +.++ +...+..++|++||...+...
T Consensus 110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~------- 182 (287)
T 3rku_A 110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY------- 182 (287)
T ss_dssp CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-------
T ss_pred HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC-------
Confidence 2347999999999543 1 11 11111 1111 123467899999998754211
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcc--cCCCCcccccccHHHH
Q 024143 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTV--DSRPDHILNLIHYEVN 263 (272)
Q Consensus 195 ~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~--~~~~~~~~~~I~v~Dv 263 (272)
.+ ...|+.+|...+.+.+.+ + +..++||.+..+... ... .+.. .........++..+|+
T Consensus 183 ----~~--~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~---~~~-~~~~~~~~~~~~~~~p~~pedv 252 (287)
T 3rku_A 183 ----PT--GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL---VRY-RGNEEQAKNVYKDTTPLMADDV 252 (287)
T ss_dssp ----TT--CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH---HHT-TTCHHHHHHHHTTSCCEEHHHH
T ss_pred ----CC--CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc---ccc-cCcHHHHHHhhcccCCCCHHHH
Confidence 11 258999999998876643 2 678999999865310 000 0000 0000001123489999
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
|++++.++
T Consensus 253 A~~v~~l~ 260 (287)
T 3rku_A 253 ADLIVYAT 260 (287)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99988765
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.19 E-value=3.5e-10 Score=97.31 Aligned_cols=165 Identities=13% Similarity=0.035 Sum_probs=102.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-------CCceeeccCc-----c----------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPSLKWT-----E---------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-------~~i~~~~~d~-----~---------- 138 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++++...+.. ..+..+..|. +
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARY--GATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence 44578999996 99999999999999 9999999998766543321 1333333332 1
Q ss_pred -ccCCCCEEEEecCCCCC----CC-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCC
Q 024143 139 -ATQKFPYVIFCAPPSRS----LD-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDED 195 (272)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~----~~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (272)
....+|++||+|+.... .+ +.+.+ +.++ +...+.+++|++||...+...
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-------- 159 (252)
T 3f1l_A 88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR-------- 159 (252)
T ss_dssp HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC--------
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC--------
Confidence 13479999999986321 11 11111 1111 123567899999998754211
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc----C----eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~----~----~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
.+. ..|+.+|...|.+.+.+ + +..+.|+.+.. ++....... .....+...+|+|+++
T Consensus 160 ---~~~--~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t----~~~~~~~~~------~~~~~~~~p~dva~~~ 224 (252)
T 3f1l_A 160 ---ANW--GAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRT----AMRASAFPT------EDPQKLKTPADIMPLY 224 (252)
T ss_dssp ---TTC--HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSS----HHHHHHCTT------CCGGGSBCTGGGHHHH
T ss_pred ---CCC--chhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccC----chhhhhCCc------cchhccCCHHHHHHHH
Confidence 112 58999999999877654 2 45677877753 222111111 1122356778888887
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+..+
T Consensus 225 ~~L~ 228 (252)
T 3f1l_A 225 LWLM 228 (252)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 6554
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.19 E-value=4e-11 Score=102.64 Aligned_cols=170 Identities=9% Similarity=-0.035 Sum_probs=102.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHh-cCCCCeEEEEecCCcchhhhhhCCceeeccCc---c----c-----cCCCCEEEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQ-EHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----A-----TQKFPYVIF 148 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~-~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~----~-----~~~~D~Vi~ 148 (272)
.|+++||||+ |.||++++++|.+ . |++|+..+|+++... ..+..+..|. + . ..++|++||
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~--g~~v~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~ 76 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNK--NHTVINIDIQQSFSA----ENLKFIKADLTKQQDITNVLDIIKNVSFDGIFL 76 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTST--TEEEEEEESSCCCCC----TTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcC--CcEEEEecccccccc----ccceEEecCcCCHHHHHHHHHHHHhCCCCEEEE
Confidence 3578999997 9999999999999 7 899999998765211 1233444442 1 1 237899999
Q ss_pred ecCCCCCC---C-----hHHHHH-------HHHHH-hc---CCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHH
Q 024143 149 CAPPSRSL---D-----YPGDVR-------LAALS-WN---GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (272)
Q Consensus 149 ~a~~~~~~---~-----~~~~~~-------~l~~~-~~---gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~s 209 (272)
+|+..... + +.+.+. .+... .. ...++|++||...|... .+. ..|+.+
T Consensus 77 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~--~~Y~as 143 (244)
T 4e4y_A 77 NAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK-----------PNS--FAYTLS 143 (244)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC-----------TTB--HHHHHH
T ss_pred CCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC-----------CCC--chhHHH
Confidence 99964321 1 111111 11111 11 11489999998765321 112 589999
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHH--cCc-------ccCCCCcccccccHHHHHHHHHHHh
Q 024143 210 LLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQ--KGT-------VDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~--~g~-------~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|...|.+.+.+ + +.+++||.++.+.......... .+. ..........+.+.+|+|++++.++
T Consensus 144 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~ 223 (244)
T 4e4y_A 144 KGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLL 223 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHh
Confidence 99999877643 3 6889999998653221110000 000 0111222344788999999988765
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.4e-09 Score=95.08 Aligned_cols=174 Identities=11% Similarity=0.028 Sum_probs=105.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC----------------cchhhh----hhC--CceeeccCc-
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA----------------DHHDEL----INM--GITPSLKWT- 137 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~----------------~~~~~l----~~~--~i~~~~~d~- 137 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++ ++...+ ... .+..+..|.
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 86 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR 86 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence 34578999996 99999999999999 99999999872 222211 111 233444443
Q ss_pred --c-----------ccCCCCEEEEecCCCCCCC---------hHHHHH-----------HHH--HHhcC-CCeEEEEecc
Q 024143 138 --E-----------ATQKFPYVIFCAPPSRSLD---------YPGDVR-----------LAA--LSWNG-EGSFLFTSSS 181 (272)
Q Consensus 138 --~-----------~~~~~D~Vi~~a~~~~~~~---------~~~~~~-----------~l~--~~~~g-vkr~V~~SS~ 181 (272)
+ ...++|++||+|+...... +.+.+. .++ +...+ ..++|++||.
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~ 166 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV 166 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence 1 1348999999999643211 111111 111 11223 5699999998
Q ss_pred eeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH--HHHHHcC----c
Q 024143 182 AIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH--VYWLQKG----T 246 (272)
Q Consensus 182 ~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~--~~~l~~g----~ 246 (272)
..+... .. ...|+.+|...+.+.+.+ + +..++||.+..+..... ...+... .
T Consensus 167 ~~~~~~-----------~~--~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 233 (286)
T 3uve_A 167 GGLKAY-----------PH--TGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPG 233 (286)
T ss_dssp GGTSCC-----------TT--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCC
T ss_pred hhccCC-----------CC--ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccc
Confidence 765321 11 258999999998877653 3 57899999988753211 1111100 0
Q ss_pred c--------cCCCCcccccccHHHHHHHHHHHh
Q 024143 247 V--------DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 247 ~--------~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+ ...... ..+.+.+|+|++++..+
T Consensus 234 ~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~ 265 (286)
T 3uve_A 234 PDDMAPICQMFHTLP-IPWVEPIDISNAVLFFA 265 (286)
T ss_dssp HHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHH
T ss_pred hhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHc
Confidence 0 011111 45789999999987654
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.18 E-value=7.2e-10 Score=98.77 Aligned_cols=174 Identities=12% Similarity=0.025 Sum_probs=104.0
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc------------chhh----hhhC--CceeeccCc---c--
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD------------HHDE----LINM--GITPSLKWT---E-- 138 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~------------~~~~----l~~~--~i~~~~~d~---~-- 138 (272)
..+++||||+ |.||++++++|.++ |++|++++|+.. +... +... .+..+..|. +
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL 122 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 3468999996 99999999999999 999999987621 1111 1112 233444443 1
Q ss_pred ---------ccCCCCEEEEecCCCCCC---C-----hHHHHH-----------HHH--HHhcC-CCeEEEEecceeecCC
Q 024143 139 ---------ATQKFPYVIFCAPPSRSL---D-----YPGDVR-----------LAA--LSWNG-EGSFLFTSSSAIYDCS 187 (272)
Q Consensus 139 ---------~~~~~D~Vi~~a~~~~~~---~-----~~~~~~-----------~l~--~~~~g-vkr~V~~SS~~vYg~~ 187 (272)
...++|++||+|+..... + +.+.+. .++ +...+ ..++|++||...+...
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~ 202 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA 202 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC
Confidence 134899999999964321 1 111111 111 11223 5689999998765321
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc--HHHHHHHcC----c------
Q 024143 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG--AHVYWLQKG----T------ 246 (272)
Q Consensus 188 ~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~--~~~~~l~~g----~------ 246 (272)
.+ ...|+.+|...|.+.+.+ + +..++||.++++... .....+... .
T Consensus 203 -----------~~--~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (317)
T 3oec_A 203 -----------PG--QSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAE 269 (317)
T ss_dssp -----------TT--BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHH
T ss_pred -----------CC--CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHH
Confidence 01 258999999998877653 3 678999999875311 111011000 0
Q ss_pred cc-CCCCcccccccHHHHHHHHHHHh
Q 024143 247 VD-SRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 247 ~~-~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.. ........+++.+|+|++++..+
T Consensus 270 ~~~~~~~~p~~~~~pedvA~av~fL~ 295 (317)
T 3oec_A 270 LFSQLTLLPIPWVEPEDVSNAVAWLA 295 (317)
T ss_dssp HHTTTCSSSSSSBCHHHHHHHHHHHT
T ss_pred HHhhhccCCCCCCCHHHHHHHHHHHc
Confidence 00 01111256889999999987654
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.18 E-value=4.9e-10 Score=96.52 Aligned_cols=167 Identities=11% Similarity=0.036 Sum_probs=101.6
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCCEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPYV 146 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D~V 146 (272)
+++||||+ |.||++++++|.++..|+.|+...|++++.+.+.. ..+..+..|. + ....+|++
T Consensus 3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 82 (254)
T 3kzv_A 3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSL 82 (254)
T ss_dssp CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEE
Confidence 67999996 99999999999998224789999998776654432 1344444443 1 13489999
Q ss_pred EEecCCCCC-C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 147 IFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 147 i~~a~~~~~-~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
||+|+.... . + +.+.+ +.++ +...+ .++|++||...+... .+. .
T Consensus 83 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~-----------~~~--~ 148 (254)
T 3kzv_A 83 VANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYF-----------SSW--G 148 (254)
T ss_dssp EEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSS-----------CCS--H
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCC-----------CCc--c
Confidence 999996321 1 1 11111 1111 12234 799999998765321 122 5
Q ss_pred hHHHHHHHHHHHHHHc-----C--eeEEeeCceecCCCcH-------------HHHHHHcCcccCCCCcccccccHHHHH
Q 024143 205 PRTDVLLKAEKVILEF-----G--GCVLRLAGLYKADRGA-------------HVYWLQKGTVDSRPDHILNLIHYEVNT 264 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~-----~--~~IlRp~~iyG~~~~~-------------~~~~l~~g~~~~~~~~~~~~I~v~Dva 264 (272)
.|+.+|...|.+.+.+ + +..++||.+..+-... ....+.... ....+.+.+|+|
T Consensus 149 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~r~~~p~dva 222 (254)
T 3kzv_A 149 AYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLK------ENNQLLDSSVPA 222 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHH------TTC----CHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHH------hcCCcCCcccHH
Confidence 8999999999877653 3 6789999998764211 011111111 122367889999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
++++..+
T Consensus 223 ~~v~~L~ 229 (254)
T 3kzv_A 223 TVYAKLA 229 (254)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9877543
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.5e-10 Score=100.63 Aligned_cols=169 Identities=9% Similarity=-0.001 Sum_probs=103.0
Q ss_pred cCCCeEEEEcC-cH--HHHHHHHHHHhcCCCCeEEEEecCCcchhh---hhh--CCceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GV--LGRLVAEQWRQEHPGCQIYGQTMTADHHDE---LIN--MGITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-Gf--iG~~l~~~L~~~~~g~~V~~~~R~~~~~~~---l~~--~~i~~~~~d~---~-----------~ 139 (272)
+..+++||||+ |+ ||++++++|.++ |++|++++|++...+. +.. ..+..+.+|. + .
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence 34578999997 89 999999999999 9999999998543222 111 1344444443 1 1
Q ss_pred cCCCCEEEEecCCCC----CC---C-----hHHHHH-------HHHH----HhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSR----SL---D-----YPGDVR-------LAAL----SWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~----~~---~-----~~~~~~-------~l~~----~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
..++|++||+|+... .. + +.+.+. .+.. ......++|++||...+...
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~--------- 177 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM--------- 177 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC---------
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC---------
Confidence 348999999999653 11 1 111111 1110 11234699999998765321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYE 261 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~ 261 (272)
.. ...|+.+|...+.+.+.+ + +..++||.+..+.... ...++.+..+ ...+...+
T Consensus 178 --~~--~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------~~r~~~pe 247 (293)
T 3grk_A 178 --PN--YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAP------LRRTVTID 247 (293)
T ss_dssp --TT--TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHST------TSSCCCHH
T ss_pred --Cc--hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCC------CCCCCCHH
Confidence 11 268999999999877653 3 6789999998764211 1111222122 12357789
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++..+
T Consensus 248 dvA~~v~~L~ 257 (293)
T 3grk_A 248 EVGDVGLYFL 257 (293)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9999887654
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.2e-10 Score=100.48 Aligned_cols=170 Identities=12% Similarity=0.052 Sum_probs=102.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-------CCceeeccCc---c-----------cc
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPSLKWT---E-----------AT 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-------~~i~~~~~d~---~-----------~~ 140 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + ..
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAE--GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF 109 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3478999996 99999999999999 9999999998766543321 1124444443 1 13
Q ss_pred CCCCEEEEecCCCCC-C---C-----hHHHH-----------HHHH--HHhcC--CCeEEEEecceeecCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNG--EGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~-~---~-----~~~~~-----------~~l~--~~~~g--vkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
..+|++||+|+.... . + +.+.+ +.++ ....+ ..++|++||...+...
T Consensus 110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~--------- 180 (281)
T 4dry_A 110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR--------- 180 (281)
T ss_dssp SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC---------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC---------
Confidence 478999999986432 1 1 11111 1111 12222 5799999997754211
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCccc-CCCCcccccccHHHHHHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVD-SRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~-~~~~~~~~~I~v~Dva~a 266 (272)
.+. ..|+.+|...|.+.+.+ + +..++||.+..+-.. .+..+... ........++..+|+|++
T Consensus 181 --~~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~~~~~pedvA~~ 252 (281)
T 4dry_A 181 --PNS--APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA----RMSTGVLQANGEVAAEPTIPIEHIAEA 252 (281)
T ss_dssp --TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-----------CEEECTTSCEEECCCBCHHHHHHH
T ss_pred --CCC--hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh----hhcchhhhhhhcccccCCCCHHHHHHH
Confidence 122 68999999998877653 2 577899988755321 11111110 011112336889999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++.++
T Consensus 253 v~fL~ 257 (281)
T 4dry_A 253 VVYMA 257 (281)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87654
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=2.4e-10 Score=98.88 Aligned_cols=136 Identities=12% Similarity=-0.003 Sum_probs=89.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~~ 141 (272)
..++++|||+ |.||++++++|.++ |++|++++|++++.+.+. .. .+..+.+|. + ...
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 3478999996 99999999999999 999999999876554332 11 244444443 1 134
Q ss_pred CCCEEEEecCCC-CCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPS-RSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~-~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
++|+|||+|+.. .... +.+.+ +.++ +...+.+++|++||...+... .
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 152 (262)
T 1zem_A 84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-----------P 152 (262)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----------T
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------C
Confidence 799999999864 2111 11111 1111 123456899999998765321 0
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
+ ...|+.+|...+.+.+.+ + +.+++|+.+..+
T Consensus 153 ~--~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 153 N--MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp T--BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred C--CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 1 158999999888766543 3 678999988654
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.17 E-value=1.6e-10 Score=99.90 Aligned_cols=170 Identities=8% Similarity=-0.036 Sum_probs=102.2
Q ss_pred CcCCCeEEEEc-C--cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc---c-----------
Q 024143 81 GVGENDLLIVG-P--GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E----------- 138 (272)
Q Consensus 81 ~~~~~~IlItG-a--GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~---~----------- 138 (272)
....++||||| + |.||++++++|.++ |++|++++|+....+.+.. ..+..+..|. +
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHc--CCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 34568999998 5 79999999999999 9999999998543332221 1244444443 1
Q ss_pred ccCCCCEEEEecCCCCC--------C-ChHHHHHH-----------HHH-Hh---cCCCeEEEEecceeecCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRS--------L-DYPGDVRL-----------AAL-SW---NGEGSFLFTSSSAIYDCSDNGACDE 194 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~--------~-~~~~~~~~-----------l~~-~~---~gvkr~V~~SS~~vYg~~~~~~~~E 194 (272)
...++|++||+|+.... + .-.+.... +.. .. ....++|++||...+...
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------- 161 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI------- 161 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-------
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC-------
Confidence 13478999999986431 1 10111111 111 11 123589999998764321
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCccccccc
Q 024143 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIH 259 (272)
Q Consensus 195 ~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~ 259 (272)
.+ ...|+.+|...|.+.+.+ + +.+++||.+..+.... ....+....+ ...+..
T Consensus 162 ----~~--~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 229 (271)
T 3ek2_A 162 ----PN--YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSP------LKRNVT 229 (271)
T ss_dssp ----TT--TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHST------TSSCCC
T ss_pred ----CC--ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCC------cCCCCC
Confidence 11 268999999999877643 3 6789999998764221 1111222121 123577
Q ss_pred HHHHHHHHHHHh
Q 024143 260 YEVNTLVLFIAS 271 (272)
Q Consensus 260 v~Dva~ai~~a~ 271 (272)
.+|+|++++..+
T Consensus 230 pedva~~i~~l~ 241 (271)
T 3ek2_A 230 IEQVGNAGAFLL 241 (271)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 899999987664
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.6e-09 Score=95.62 Aligned_cols=174 Identities=14% Similarity=0.074 Sum_probs=104.9
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC------------cchhh----hhhC--CceeeccCc---c-
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA------------DHHDE----LINM--GITPSLKWT---E- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~------------~~~~~----l~~~--~i~~~~~d~---~- 138 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++ ++... +... .+..+..|. +
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLARE--GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA 103 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 34578999996 99999999999999 99999999873 22211 2222 233444443 1
Q ss_pred ----------ccCCCCEEEEecCCCCCC----C-----hHHHH-----------HHHH--HHh-cCCCeEEEEecceeec
Q 024143 139 ----------ATQKFPYVIFCAPPSRSL----D-----YPGDV-----------RLAA--LSW-NGEGSFLFTSSSAIYD 185 (272)
Q Consensus 139 ----------~~~~~D~Vi~~a~~~~~~----~-----~~~~~-----------~~l~--~~~-~gvkr~V~~SS~~vYg 185 (272)
....+|++||+|+..... + +.+.+ +.++ +.. .+..++|++||...+.
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~ 183 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR 183 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence 134899999999853321 1 11111 1111 112 2367999999987653
Q ss_pred CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHH-HH-HHHcC---cc----
Q 024143 186 CSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH-VY-WLQKG---TV---- 247 (272)
Q Consensus 186 ~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~-~~-~l~~g---~~---- 247 (272)
.. .. ...|+.+|...+.+.+.+ + +..++||.+..+..... .. .+... ..
T Consensus 184 ~~-----------~~--~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 250 (299)
T 3t7c_A 184 GA-----------EN--IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDF 250 (299)
T ss_dssp CC-----------TT--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred CC-----------CC--cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHH
Confidence 21 11 258999999998877653 3 67899999988753211 10 11000 00
Q ss_pred -----cCCCCcccccccHHHHHHHHHHHh
Q 024143 248 -----DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 248 -----~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
...... ..+...+|+|++++..+
T Consensus 251 ~~~~~~~~~~p-~r~~~pedvA~~v~fL~ 278 (299)
T 3t7c_A 251 QVASRQMHVLP-IPYVEPADISNAILFLV 278 (299)
T ss_dssp HHHHHHHSSSS-CSCBCHHHHHHHHHHHH
T ss_pred HHHhhhhcccC-cCCCCHHHHHHHHHHHh
Confidence 000111 34788999999987654
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.9e-10 Score=103.04 Aligned_cols=136 Identities=15% Similarity=0.189 Sum_probs=87.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-----chhhhh----h--CCceeeccCc---c----c-----
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-----HHDELI----N--MGITPSLKWT---E----A----- 139 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-----~~~~l~----~--~~i~~~~~d~---~----~----- 139 (272)
.+++||||+ |+||++++++|.++ |++|++.+|+.. +.+.+. . ..+..+..|. + +
T Consensus 5 ~k~vlVTGas~GIG~aia~~L~~~--G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~ 82 (324)
T 3u9l_A 5 KKIILITGASSGFGRLTAEALAGA--GHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII 82 (324)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 367999996 99999999999999 999999988631 222221 1 2344444443 1 1
Q ss_pred --cCCCCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 140 --TQKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 140 --~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
..++|+|||+|+...... +.+.+ ..+. +...+.+++|++||...+....
T Consensus 83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~-------- 154 (324)
T 3u9l_A 83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP-------- 154 (324)
T ss_dssp HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC--------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC--------
Confidence 248999999999643211 11111 1111 1345678999999987653210
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
| ....|+.+|...|.+.+.+ + +++++||.+.++
T Consensus 155 ---~-~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~ 196 (324)
T 3u9l_A 155 ---P-YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSG 196 (324)
T ss_dssp ---S-SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---
T ss_pred ---C-cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccC
Confidence 1 1257999999999877653 3 688999999754
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.16 E-value=1.3e-10 Score=98.97 Aligned_cols=157 Identities=11% Similarity=0.029 Sum_probs=99.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------cc--CCCCEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------AT--QKFPYVI 147 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~--~~~D~Vi 147 (272)
+++||||+ |+||++++++|.++ |++|++++|++++... ....+..|. + .. .++|+||
T Consensus 4 k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv 77 (236)
T 1ooe_A 4 GKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQAD----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF 77 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTTSS----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecCcccccc----ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 67999996 99999999999999 9999999998765421 122333342 1 12 4799999
Q ss_pred EecCCCCC----CC-----hHHHHH-H------HH---HHh-cCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 148 FCAPPSRS----LD-----YPGDVR-L------AA---LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 148 ~~a~~~~~----~~-----~~~~~~-~------l~---~~~-~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
|+|+.... .+ +.+.+. + +. ... ....++|++||...|... .+. ..|+
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y~ 144 (236)
T 1ooe_A 78 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT-----------PSM--IGYG 144 (236)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------TTB--HHHH
T ss_pred ECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC-----------CCc--HHHH
Confidence 99985431 11 111110 1 11 011 123599999998765321 112 5899
Q ss_pred HHHHHHHHHHHHc---------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 208 DVLLKAEKVILEF---------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 208 ~sk~~aE~~l~~~---------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
.+|...|.+.+.+ + +.++||+.++++. ...... ......++..+|+|++++..
T Consensus 145 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~----~~~~~~------~~~~~~~~~~~dvA~~i~~~ 208 (236)
T 1ooe_A 145 MAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM----NRKWMP------NADHSSWTPLSFISEHLLKW 208 (236)
T ss_dssp HHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH----HHHHST------TCCGGGCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc----hhhcCC------CccccccCCHHHHHHHHHHH
Confidence 9999999877542 2 5789999987642 111111 11223467889999998744
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.5e-09 Score=94.64 Aligned_cols=170 Identities=11% Similarity=0.008 Sum_probs=103.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-cchhh----hhhCC--ceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE----LINMG--ITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~~~----l~~~~--i~~~~~d~---~-----------~ 139 (272)
+..+++||||+ |.||++++++|.++ |++|++++++. ++.+. +...+ +..+..|. + .
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALE--GAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 34478999996 99999999999999 99999987654 33222 22222 33444443 1 1
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHHHH-------HHH----HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGDVR-------LAA----LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~~-------~l~----~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
..++|++||+|+...... +.+.+. .+. ....+..++|++||...... +..+
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~----------~~~~ 176 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV----------PWPG 176 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC----------CSTT
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC----------CCCC
Confidence 348999999998643221 111111 111 11123579999998643210 1112
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc---HHHHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG---AHVYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~---~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
...|+.+|...|.+.+.+ + +..++|+.+..+... .......+..+ ...+...+|+|++++
T Consensus 177 --~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~------~~r~~~pedvA~~v~ 248 (271)
T 3v2g_A 177 --ISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIA------TGSYGEPQDIAGLVA 248 (271)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCT------TSSCBCHHHHHHHHH
T ss_pred --chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCC------CCCCCCHHHHHHHHH
Confidence 268999999998876643 3 678999999877432 11112222222 123678899999887
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 249 fL~ 251 (271)
T 3v2g_A 249 WLA 251 (271)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.8e-10 Score=99.33 Aligned_cols=169 Identities=12% Similarity=0.009 Sum_probs=102.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c----c------cCCCCEEEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----A------TQKFPYVIF 148 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~----~------~~~~D~Vi~ 148 (272)
..+++||||+ |.||++++++|.++ |++|++++|..++........+..+..|. + + ...+|++||
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~ 85 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDA--GAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVN 85 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 3468999997 99999999999999 99999999965443222222344554543 1 1 248999999
Q ss_pred ecCCCC----------CC--ChHHHHH-H------H----H--HHh--------cCCCeEEEEecceeecCCCCCCCCCC
Q 024143 149 CAPPSR----------SL--DYPGDVR-L------A----A--LSW--------NGEGSFLFTSSSAIYDCSDNGACDED 195 (272)
Q Consensus 149 ~a~~~~----------~~--~~~~~~~-~------l----~--~~~--------~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (272)
+|+... .. ++.+.+. | + + +.. .+..++|++||...+...
T Consensus 86 nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 157 (257)
T 3tl3_A 86 CAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ-------- 157 (257)
T ss_dssp CGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH--------
T ss_pred CCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC--------
Confidence 998532 11 1111111 1 1 1 111 234689999998765321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH----HHHHHHcCcccCCCCcccccccHHH
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~----~~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
.+. ..|+.+|...|.+.+.. + +..++||.+..+.... ....+....+. ...+.+.+|
T Consensus 158 ---~~~--~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----~~r~~~p~d 227 (257)
T 3tl3_A 158 ---IGQ--AAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPH-----PSRLGNPDE 227 (257)
T ss_dssp ---HHH--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSS-----SCSCBCHHH
T ss_pred ---CCC--ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCC-----CCCccCHHH
Confidence 011 58999999888776643 3 5789999998764321 11112222211 134788999
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|++++.++
T Consensus 228 va~~v~~l~ 236 (257)
T 3tl3_A 228 YGALAVHII 236 (257)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999987654
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=2.1e-09 Score=94.54 Aligned_cols=169 Identities=11% Similarity=-0.114 Sum_probs=102.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEe-cCCcchhhhh-----h--CCceeeccCc---c------------
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDELI-----N--MGITPSLKWT---E------------ 138 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~-R~~~~~~~l~-----~--~~i~~~~~d~---~------------ 138 (272)
..+++||||+ |.||++++++|.++ |++|++++ |++++...+. . ..+..+..|. +
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP 85 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence 3468999996 99999999999999 99999999 8865543321 1 1233333332 2
Q ss_pred -----c-----------cCCCCEEEEecCCCCCCC---h---------------HHHHHH---------------HH--H
Q 024143 139 -----A-----------TQKFPYVIFCAPPSRSLD---Y---------------PGDVRL---------------AA--L 167 (272)
Q Consensus 139 -----~-----------~~~~D~Vi~~a~~~~~~~---~---------------~~~~~~---------------l~--~ 167 (272)
. ...+|++||+|+...... . .+.... ++ +
T Consensus 86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m 165 (291)
T 1e7w_A 86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV 165 (291)
T ss_dssp BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 1 137999999998542110 0 111111 11 1
Q ss_pred HhcC------CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceec
Q 024143 168 SWNG------EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (272)
Q Consensus 168 ~~~g------vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG 232 (272)
...+ .+++|++||...+... .+ ...|+.+|...+.+.+.+ + +..++||.+..
T Consensus 166 ~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~~--~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T 232 (291)
T 1e7w_A 166 AGTPAKHRGTNYSIINMVDAMTNQPL-----------LG--YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 232 (291)
T ss_dssp HTSCGGGSCSCEEEEEECCTTTTSCC-----------TT--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred HhcCCCCCCCCcEEEEEechhhcCCC-----------CC--CchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccC
Confidence 1334 5799999998754321 11 258999999998876643 3 67899999865
Q ss_pred CCC--cHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 233 ADR--GAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 233 ~~~--~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.. ......+....+.+ .-+...+|+|++++..+
T Consensus 233 ~~~~~~~~~~~~~~~~p~~-----~r~~~pedvA~~v~~l~ 268 (291)
T 1e7w_A 233 VDDMPPAVWEGHRSKVPLY-----QRDSSAAEVSDVVIFLC 268 (291)
T ss_dssp GGGSCHHHHHHHHTTCTTT-----TSCBCHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHhhCCCC-----CCCCCHHHHHHHHHHHh
Confidence 430 01111122111111 03678999999987654
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.14 E-value=2.6e-09 Score=92.79 Aligned_cols=176 Identities=10% Similarity=0.009 Sum_probs=103.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-cchhh----hhhC--CceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE----LINM--GITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~~~----l~~~--~i~~~~~d~---~-----------~ 139 (272)
+..+++||||+ |.||++++++|.++ |++|++++++. +..+. +... .+..+..|. + .
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRL--GAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45578999996 99999999999999 99999987753 32222 2222 244444443 1 1
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHHHH-------HHH---H-HhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGDVR-------LAA---L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~~-------~l~---~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
...+|++||+|+...... +.+.+. .+. . ......++|++||...... +..+
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~ 163 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF----------SVPK 163 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC----------CCTT
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC----------CCCC
Confidence 347999999999754221 111111 111 0 1112459999999652110 1112
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHH-HcC---------cccCCCCcccccccHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWL-QKG---------TVDSRPDHILNLIHYE 261 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l-~~g---------~~~~~~~~~~~~I~v~ 261 (272)
. ..|+.+|...|.+.+.+ + +..++||.+..+......... ..+ ...........+.+.+
T Consensus 164 ~--~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 241 (270)
T 3is3_A 164 H--SLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQ 241 (270)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHH
T ss_pred C--chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHH
Confidence 2 68999999999877653 3 578999999876421100000 000 0000011223367899
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|++++..+
T Consensus 242 dvA~~v~~L~ 251 (270)
T 3is3_A 242 DVANVVGFLV 251 (270)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 9999987654
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.14 E-value=8e-10 Score=94.35 Aligned_cols=165 Identities=13% Similarity=0.013 Sum_probs=101.2
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h---CCceeeccCc-----c----------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N---MGITPSLKWT-----E---------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~---~~i~~~~~d~-----~---------- 138 (272)
+..++++|||+ |.||++++++|.++ |++|++++|++++.+.+. . ........|. +
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAH--GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence 45578999997 99999999999999 999999999876654432 1 1222332221 1
Q ss_pred -ccCCCCEEEEecCCCCC-C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCC
Q 024143 139 -ATQKFPYVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDED 195 (272)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~-~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (272)
...++|+|||+|+.... . + +.+.+ +.++ +...+.+++|++||...+...
T Consensus 90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------- 161 (247)
T 3i1j_A 90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR-------- 161 (247)
T ss_dssp HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCC--------
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCC--------
Confidence 13489999999996421 1 1 11111 1111 123456799999997654211
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc--------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHH
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF--------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTL 265 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~--------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ 265 (272)
.+ ...|+.+|...|.+.+.+ + +..++||.+.. ++...... ......+...+|+|+
T Consensus 162 ---~~--~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t----~~~~~~~~------~~~~~~~~~p~dva~ 226 (247)
T 3i1j_A 162 ---AN--WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRT----GMRAQAYP------DENPLNNPAPEDIMP 226 (247)
T ss_dssp ---TT--CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSS----HHHHHHST------TSCGGGSCCGGGGTH
T ss_pred ---CC--cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC----ccchhccc------ccCccCCCCHHHHHH
Confidence 11 258999999998876542 2 45788887743 22211111 112233566788888
Q ss_pred HHHHHh
Q 024143 266 VLFIAS 271 (272)
Q Consensus 266 ai~~a~ 271 (272)
+++..+
T Consensus 227 ~~~~l~ 232 (247)
T 3i1j_A 227 VYLYLM 232 (247)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 877654
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=5.3e-10 Score=95.44 Aligned_cols=159 Identities=10% Similarity=-0.000 Sum_probs=100.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----------cc--CCCCEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------AT--QKFPYV 146 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----------~~--~~~D~V 146 (272)
++++||||+ |.||++++++|.++ |++|++++|++++... ....+..|. + .. .++|+|
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l 80 (241)
T 1dhr_A 7 ARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEEAS----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI 80 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTTSS----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCChhhccC----CcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 468999996 99999999999999 9999999998765421 122333342 1 12 479999
Q ss_pred EEecCCCCC----CC-----hHHHHH-H------HHH---Hh-cCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 147 IFCAPPSRS----LD-----YPGDVR-L------AAL---SW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 147 i~~a~~~~~----~~-----~~~~~~-~------l~~---~~-~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
||+|+.... .+ +.+.+. + +.. .. ...+++|++||...+... .+. ..|
T Consensus 81 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y 147 (241)
T 1dhr_A 81 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT-----------PGM--IGY 147 (241)
T ss_dssp EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------TTB--HHH
T ss_pred EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC-----------CCc--hHH
Confidence 999986431 11 111110 1 110 11 113699999998765321 112 589
Q ss_pred HHHHHHHHHHHHHc---------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 207 TDVLLKAEKVILEF---------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 207 ~~sk~~aE~~l~~~---------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+|...|.+.+.+ + +.+++|+.+-.+ +...... ......++..+|+|++++..+
T Consensus 148 ~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~----~~~~~~~------~~~~~~~~~~~~vA~~v~~l~ 213 (241)
T 1dhr_A 148 GMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP----MNRKSMP------EADFSSWTPLEFLVETFHDWI 213 (241)
T ss_dssp HHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH----HHHHHST------TSCGGGSEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc----cccccCc------chhhccCCCHHHHHHHHHHHh
Confidence 99999999887642 2 578999987543 2111111 112234678899999987665
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.13 E-value=6.2e-11 Score=100.09 Aligned_cols=156 Identities=12% Similarity=-0.003 Sum_probs=98.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCC-
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSR- 154 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~- 154 (272)
.+++||||+ |.||++++++|.++ |++|++++|+++ ....|. +.+.++|++||+|+...
T Consensus 6 ~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~-----------~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~ 72 (223)
T 3uce_A 6 KTVYVVLGGTSGIGAELAKQLESE--HTIVHVASRQTG-----------LDISDEKSVYHYFETIGAFDHLIVTAGSYAP 72 (223)
T ss_dssp CEEEEEETTTSHHHHHHHHHHCST--TEEEEEESGGGT-----------CCTTCHHHHHHHHHHHCSEEEEEECCCCCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEecCCcc-----------cCCCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 467999996 99999999999999 999999998754 011111 12357899999999642
Q ss_pred CC---C-----hHHHHH-H------HHH-Hh---cCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024143 155 SL---D-----YPGDVR-L------AAL-SW---NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEK 215 (272)
Q Consensus 155 ~~---~-----~~~~~~-~------l~~-~~---~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~ 215 (272)
.. + +.+.+. + +.. .. ....++|++||...+... .+. ..|+.+|...|.
T Consensus 73 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~--~~Y~asK~a~~~ 139 (223)
T 3uce_A 73 AGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV-----------ANT--YVKAAINAAIEA 139 (223)
T ss_dssp CSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC-----------TTC--HHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC-----------CCc--hHHHHHHHHHHH
Confidence 11 1 111111 1 111 11 113489999998765321 122 589999999998
Q ss_pred HHHHc----C---eeEEeeCceecCCCcH----H----HHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 216 VILEF----G---GCVLRLAGLYKADRGA----H----VYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 216 ~l~~~----~---~~IlRp~~iyG~~~~~----~----~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+.+ + +..++|+.+..+.... . ...+.+.. ....+.+.+|+|++++.++
T Consensus 140 ~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dvA~~~~~l~ 204 (223)
T 3uce_A 140 TTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHL------PVGKVGEASDIAMAYLFAI 204 (223)
T ss_dssp HHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHS------TTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcC------CCCCccCHHHHHHHHHHHc
Confidence 77654 2 5678999998763211 0 11111111 1234778999999987654
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=6.8e-10 Score=95.29 Aligned_cols=170 Identities=9% Similarity=0.046 Sum_probs=106.2
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~ 143 (272)
+..+++||||+ |.||++++++|.++ |++|++++|++++...+.. ..+..+..|. + ...++
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 81 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAAD--GATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGI 81 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence 34578999996 99999999999999 9999999998766544322 2344444443 1 13479
Q ss_pred CEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
|++||+|+...... +.+.+ +.++ +...+ ..++|++||...+.... +.
T Consensus 82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~ 150 (247)
T 3rwb_A 82 DILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP-----------NM 150 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT-----------TC
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC-----------Cc
Confidence 99999999643221 11111 1111 12334 67999999987654211 12
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH----HHHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~----~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
..|+.+|...+.+.+.+ + +..++||.+..+.... ....+.... .....+...+|+|++++
T Consensus 151 --~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~-----~~~~r~~~pedva~~v~ 223 (247)
T 3rwb_A 151 --AAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML-----QAMKGKGQPEHIADVVS 223 (247)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH-----SSSCSCBCHHHHHHHHH
T ss_pred --hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc-----cccCCCcCHHHHHHHHH
Confidence 58999999888776643 3 6789999987642110 000011100 11223567899999887
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 224 ~L~ 226 (247)
T 3rwb_A 224 FLA 226 (247)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.3e-09 Score=94.95 Aligned_cols=169 Identities=9% Similarity=0.047 Sum_probs=104.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c----------ccCCCCE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E----------ATQKFPY 145 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~----------~~~~~D~ 145 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. ..+..+..|. + ...++|+
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~ 106 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHAD--GLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRY 106 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCe
Confidence 3467999997 99999999999999 9999999998776554432 2344555553 1 1236899
Q ss_pred EEEec-CCCCCC--------C-----hHHHHH-------HHH------HHh------cCCCeEEEEecceeecCCCCCCC
Q 024143 146 VIFCA-PPSRSL--------D-----YPGDVR-------LAA------LSW------NGEGSFLFTSSSAIYDCSDNGAC 192 (272)
Q Consensus 146 Vi~~a-~~~~~~--------~-----~~~~~~-------~l~------~~~------~gvkr~V~~SS~~vYg~~~~~~~ 192 (272)
+||++ +..... + +.+.+. .+. ... .+..++|++||...+...
T Consensus 107 lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 181 (281)
T 3ppi_A 107 AVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ----- 181 (281)
T ss_dssp EEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC-----
T ss_pred EEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC-----
Confidence 99994 432110 1 111111 111 011 245699999998765321
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCccccccc
Q 024143 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIH 259 (272)
Q Consensus 193 ~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~ 259 (272)
.+. ..|+.+|...+.+.+.+ + +..++||.+..+-.. .....+....+. ...+++
T Consensus 182 ------~~~--~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 248 (281)
T 3ppi_A 182 ------IGQ--TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPF-----PKRLGT 248 (281)
T ss_dssp ------TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCS-----SSSCBC
T ss_pred ------CCC--cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCC-----CCCCCC
Confidence 112 68999999888776543 3 678999998754210 111112222211 134789
Q ss_pred HHHHHHHHHHHh
Q 024143 260 YEVNTLVLFIAS 271 (272)
Q Consensus 260 v~Dva~ai~~a~ 271 (272)
.+|+|++++.++
T Consensus 249 pedvA~~v~~l~ 260 (281)
T 3ppi_A 249 PDEFADAAAFLL 260 (281)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.11 E-value=1e-09 Score=96.28 Aligned_cols=168 Identities=13% Similarity=0.046 Sum_probs=102.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh-----------hhhhC--CceeeccCc---c------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----------ELINM--GITPSLKWT---E------ 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~-----------~l~~~--~i~~~~~d~---~------ 138 (272)
+..+++||||+ |.||++++++|.++ |++|++++|+.++.+ .+... .+..+..|. +
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAAD--GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 34578999996 99999999999999 999999999876321 12222 233444443 1
Q ss_pred -----ccCCCCEEEEecCCCCCCC--------hHHHHH-H------HHH------HhcCCCeEEEEecceeecCCCCCCC
Q 024143 139 -----ATQKFPYVIFCAPPSRSLD--------YPGDVR-L------AAL------SWNGEGSFLFTSSSAIYDCSDNGAC 192 (272)
Q Consensus 139 -----~~~~~D~Vi~~a~~~~~~~--------~~~~~~-~------l~~------~~~gvkr~V~~SS~~vYg~~~~~~~ 192 (272)
...++|++||+|+...... +.+.+. | +.. ...+.+++|++||...+...
T Consensus 85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----- 159 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK----- 159 (285)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC-----
Confidence 1348999999999643211 111111 1 110 12356799999997654221
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHH
Q 024143 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVN 263 (272)
Q Consensus 193 ~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dv 263 (272)
..+ ...|+.+|...+.+.+.+ + +..++|+.+.. .+.......... ....+...+|+
T Consensus 160 -----~~~--~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~---t~~~~~~~~~~~-----~~~r~~~pedv 224 (285)
T 3sc4_A 160 -----WLR--PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVA---TAAVQNLLGGDE-----AMARSRKPEVY 224 (285)
T ss_dssp -----GSC--SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBC---CHHHHHHHTSCC-----CCTTCBCTHHH
T ss_pred -----CCC--CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccc---cHHHHhhccccc-----cccCCCCHHHH
Confidence 011 158999999998877643 2 57789985332 222222221111 12235677999
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
|++++.++
T Consensus 225 A~~~~~l~ 232 (285)
T 3sc4_A 225 ADAAYVVL 232 (285)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 98887654
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.1e-09 Score=95.18 Aligned_cols=167 Identities=8% Similarity=-0.084 Sum_probs=100.1
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec-CCcchhhh----hhC--CceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~~~l----~~~--~i~~~~~d~---~-----------~~~ 141 (272)
.+++||||+ |.||++++++|.++ |++|++..+ +.+..+.+ ... .+..+..|. + ...
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASD--GFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHH--TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 367999996 99999999999999 999998855 44333322 222 233444443 1 134
Q ss_pred CCCEEEEecCCCCCCC--------hHHHHH-H------HHH----HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDVR-L------AAL----SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~~-~------l~~----~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
++|++||+|+...... +.+.+. + +.. ......++|++||...+.... +
T Consensus 105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~-- 171 (267)
T 3u5t_A 105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP-----------S-- 171 (267)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT-----------T--
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC-----------C--
Confidence 7999999998643221 111111 1 110 111235899999987654211 1
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH-----HHHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-----HVYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~-----~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
...|+.+|...|.+.+.+ + +..++||.+..+.... ....+.+. .....+...+|+|++++
T Consensus 172 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~------~p~~r~~~pedvA~~v~ 245 (267)
T 3u5t_A 172 YGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKL------APLERLGTPQDIAGAVA 245 (267)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTS------STTCSCBCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhc------CCCCCCcCHHHHHHHHH
Confidence 258999999999877653 2 5789999987653211 01112221 12234678999999987
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 246 ~L~ 248 (267)
T 3u5t_A 246 FLA 248 (267)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=3.1e-10 Score=98.90 Aligned_cols=167 Identities=8% Similarity=-0.057 Sum_probs=102.7
Q ss_pred CCeEEEEc-C--cHHHHHHHHHHHhcCCCCeEEEEecCCc---chhhhhh--CCceeeccCc---c-----------ccC
Q 024143 84 ENDLLIVG-P--GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN--MGITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 84 ~~~IlItG-a--GfiG~~l~~~L~~~~~g~~V~~~~R~~~---~~~~l~~--~~i~~~~~d~---~-----------~~~ 141 (272)
.++++||| + |.||++++++|.++ |++|++++|+++ ..+.+.. ..+..+..|. + ...
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46899998 4 79999999999999 999999999875 2223322 1234444443 1 134
Q ss_pred CCCEEEEecCCCCC----C---C-----hHHHH-------HHHHH-Hhc---CCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRS----L---D-----YPGDV-------RLAAL-SWN---GEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~----~---~-----~~~~~-------~~l~~-~~~---gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
++|+|||+|+.... . + +...+ ..+.. ... ...++|++||...+...
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------- 152 (275)
T 2pd4_A 84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM----------- 152 (275)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----------
T ss_pred CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC-----------
Confidence 78999999986431 1 1 11111 11111 111 12699999997653211
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEVN 263 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~Dv 263 (272)
.+. ..|+.+|...|.+.+.+ + +.+++||.+..+.... ....+....+. ..+...+|+
T Consensus 153 ~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~~~~~p~dv 224 (275)
T 2pd4_A 153 AHY--NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL------RKNVSLEEV 224 (275)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT------SSCCCHHHH
T ss_pred CCc--hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc------CCCCCHHHH
Confidence 112 57999999999877653 3 6789999998874221 11111111111 125688999
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
|++++.++
T Consensus 225 a~~~~~l~ 232 (275)
T 2pd4_A 225 GNAGMYLL 232 (275)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99987654
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.1e-09 Score=94.72 Aligned_cols=174 Identities=10% Similarity=-0.013 Sum_probs=98.6
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec-CCcchhh----hhhC--CceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDE----LINM--GITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~~~----l~~~--~i~~~~~d~---~-----------~ 139 (272)
+..+++||||+ |.||++++++|.++ |++|+++.+ +.+.... +... .+..+..|. + .
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQE--GANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34578999996 99999999999999 999999844 4433222 2222 234444443 1 1
Q ss_pred cCCCCEEEEecCCC-CCC---C-----hHHHHH-------HHHH-Hhc---CCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPS-RSL---D-----YPGDVR-------LAAL-SWN---GEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~-~~~---~-----~~~~~~-------~l~~-~~~---gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
..++|++||+|+.. ... + +.+.+. .+.. ... ...++|++||...+... ..
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~ 153 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG----------GP 153 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC----------ST
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC----------CC
Confidence 34799999999854 111 1 111111 1111 111 13489999998766211 01
Q ss_pred CCCCChHHHHHHHHHHHHHHc----C----eeEEeeCceecCCCcHHHH-HHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYKADRGAHVY-WLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~----~----~~IlRp~~iyG~~~~~~~~-~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
+. ..|+.+|...|.+.+.+ + +..+.||.+..+....... ... ...........+.+.+|+|++++..
T Consensus 154 ~~--~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~--~~~~~~~p~~r~~~pedva~~v~~L 229 (259)
T 3edm_A 154 GA--LAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVR--ERVAGATSLKREGSSEDVAGLVAFL 229 (259)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC------------------------CCBCHHHHHHHHHHH
T ss_pred Cc--HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHH--HHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 12 58999999999877653 2 5678999987654221110 000 0011122334577899999998765
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 230 ~ 230 (259)
T 3edm_A 230 A 230 (259)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.09 E-value=8.3e-10 Score=97.01 Aligned_cols=69 Identities=13% Similarity=0.050 Sum_probs=50.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhhC---CceeeccCc----c-----------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINM---GITPSLKWT----E-----------A 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~~---~i~~~~~d~----~-----------~ 139 (272)
..+++||||+ |.||++++++|.++ |++|++++|+.++... +... .+..+..|. + .
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 3468999997 99999999999999 9999999998765433 2221 244444442 1 1
Q ss_pred cCCCCEEEEecCCC
Q 024143 140 TQKFPYVIFCAPPS 153 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~ 153 (272)
...+|+|||+|+..
T Consensus 89 ~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 89 FGKLDILVNNAGVA 102 (311)
T ss_dssp HSSCCEEEECCCCC
T ss_pred CCCCCEEEECCccc
Confidence 24899999999964
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=1.3e-09 Score=102.73 Aligned_cols=167 Identities=14% Similarity=0.015 Sum_probs=101.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCe-EEEEecCCcc---h----hhhhhCC--ceeeccCc---c----cc----
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTADH---H----DELINMG--ITPSLKWT---E----AT---- 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~-V~~~~R~~~~---~----~~l~~~~--i~~~~~d~---~----~~---- 140 (272)
..+++||||+ |+||+++++.|.++ |++ |+.+.|++.. . ..+...+ +..+.+|. + .+
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~ 302 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG 302 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc--CCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 3468999996 99999999999999 995 9999997642 1 2233333 33444553 1 12
Q ss_pred --CCCCEEEEecCCCCCCC--------hH-------HHHHHHHH--HhcCCCeEEEEeccee-ecCCCCCCCCCCCCCCC
Q 024143 141 --QKFPYVIFCAPPSRSLD--------YP-------GDVRLAAL--SWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVP 200 (272)
Q Consensus 141 --~~~D~Vi~~a~~~~~~~--------~~-------~~~~~l~~--~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~p~~p 200 (272)
..+|+|||+|+...... +. ....++.. ...+.++||++||... +|.. .
T Consensus 303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~------------g 370 (486)
T 2fr1_A 303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP------------G 370 (486)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT------------T
T ss_pred hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCC------------C
Confidence 24699999999654321 11 11122221 2346789999999754 4421 1
Q ss_pred CCCChHHHHHHHHHHHHHH---cC--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 201 IGRSPRTDVLLKAEKVILE---FG--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~---~~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
...|+.+|...|.+..+ .+ +++++|+.+++++...- ...... ......+++.+|+++++..++
T Consensus 371 --~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~---~~~~~~---~~~g~~~i~~e~~a~~l~~~l 438 (486)
T 2fr1_A 371 --LGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEG---PVADRF---RRHGVIEMPPETACRALQNAL 438 (486)
T ss_dssp --CTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---------------C---TTTTEECBCHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccch---hHHHHH---HhcCCCCCCHHHHHHHHHHHH
Confidence 15789999888876554 34 78999999987642110 000111 112346799999999988765
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.5e-09 Score=94.80 Aligned_cols=136 Identities=9% Similarity=-0.012 Sum_probs=90.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C--CceeeccCc---c----c------cCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--GITPSLKWT---E----A------TQK 142 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~--~i~~~~~d~---~----~------~~~ 142 (272)
..++++|||+ |.||++++++|.++ |++|++++|++++...+.. . .+..+..|. + . ..+
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGA--GAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 3478999996 99999999999999 9999999998776544321 1 234444442 1 1 147
Q ss_pred CCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|++||+|+...... +.+.+ +.++ +...+..++|++||...+.. ..+.
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-----------~~~~ 178 (275)
T 4imr_A 110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRP-----------KSVV 178 (275)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTB
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-----------CCCc
Confidence 999999999643211 11111 1111 12346689999999875431 1122
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
..|+.+|...+.+.+.+ + +..++||.+..+
T Consensus 179 --~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 217 (275)
T 4imr_A 179 --TAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTD 217 (275)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred --hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCc
Confidence 57999999998877653 3 577999999765
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.6e-09 Score=94.29 Aligned_cols=168 Identities=13% Similarity=0.029 Sum_probs=102.7
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh-----------hhhhCC--ceeeccCc---c------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----------ELINMG--ITPSLKWT---E------ 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~-----------~l~~~~--i~~~~~d~---~------ 138 (272)
+..+++||||+ |.||++++++|.++ |++|++++|+.++.+ .+...+ +..+..|. +
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKD--GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHC--CCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 44578999997 99999999999999 999999999876421 122222 33333443 1
Q ss_pred -----ccCCCCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCC
Q 024143 139 -----ATQKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGAC 192 (272)
Q Consensus 139 -----~~~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~ 192 (272)
...++|+|||+|+..... + +.+.+ +.++ +...+..++|++||...+... +
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~---~- 196 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV---W- 196 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG---G-
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC---C-
Confidence 134899999999964321 1 11111 1111 123456899999998765321 0
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHc------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHH
Q 024143 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNT 264 (272)
Q Consensus 193 ~E~~p~~p~~~~~y~~sk~~aE~~l~~~------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva 264 (272)
..+. ..|+.+|...+.+.+.+ + +..+.|+.+.. ......+... .....+...+|+|
T Consensus 197 -----~~~~--~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~---T~~~~~~~~~------~~~~r~~~pedvA 260 (346)
T 3kvo_A 197 -----FKQH--CAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIH---TAAMDMLGGP------GIESQCRKVDIIA 260 (346)
T ss_dssp -----TSSS--HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBC---CHHHHHHCC--------CGGGCBCTHHHH
T ss_pred -----CCCc--hHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccc---cHHHHhhccc------cccccCCCHHHHH
Confidence 1112 68999999988776643 2 56788885332 2222222111 1123356789999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
++++..+
T Consensus 261 ~~v~~L~ 267 (346)
T 3kvo_A 261 DAAYSIF 267 (346)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887765
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=2.4e-09 Score=93.69 Aligned_cols=136 Identities=18% Similarity=0.087 Sum_probs=89.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D 144 (272)
..+++||||+ |.||++++++|.++ |++|++++|++++...+.. ..+..+..|. + ....+|
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAE--GARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKID 81 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 3478999996 99999999999999 9999999998776655432 2344444443 1 234799
Q ss_pred EEEEecCCCCCC--------C-----hHHHH-----------HHHHH-HhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSL--------D-----YPGDV-----------RLAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 145 ~Vi~~a~~~~~~--------~-----~~~~~-----------~~l~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
++||+|+..... + +.+.+ +.++. ......++|++||...+... .
T Consensus 82 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 150 (281)
T 3zv4_A 82 TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPN-----------G 150 (281)
T ss_dssp EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSS-----------S
T ss_pred EEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCC-----------C
Confidence 999999863210 1 11111 01110 01123799999998754211 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc----C----eeEEeeCceecC
Q 024143 200 PIGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYKA 233 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~----~----~~IlRp~~iyG~ 233 (272)
+ ...|+.+|...+.+.+.+ + +..+.||.+..+
T Consensus 151 ~--~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~ 190 (281)
T 3zv4_A 151 G--GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTD 190 (281)
T ss_dssp S--CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC-
T ss_pred C--CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCC
Confidence 1 257999999999877654 2 567899998765
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.7e-09 Score=93.38 Aligned_cols=135 Identities=14% Similarity=0.078 Sum_probs=89.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C--CceeeccCc---c--------c----cC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--GITPSLKWT---E--------A----TQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~--~i~~~~~d~---~--------~----~~ 141 (272)
.+++||||+ |.||++++++|.++ |++|++++|++++.+.+.. . .+..+..|. + . ..
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 82 (260)
T 2qq5_A 5 GQVCVVTGASRGIGRGIALQLCKA--GATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG 82 (260)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 468999996 99999999999999 9999999998765543321 1 233444442 1 1 35
Q ss_pred CCCEEEEecCC----------CCC-----CChHHH-------H----HHHH--HHhcCCCeEEEEecceeecCCCCCCCC
Q 024143 142 KFPYVIFCAPP----------SRS-----LDYPGD-------V----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACD 193 (272)
Q Consensus 142 ~~D~Vi~~a~~----------~~~-----~~~~~~-------~----~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~ 193 (272)
.+|++||+|+. ... +++.+. . +.++ +...+.+++|++||...+..
T Consensus 83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------- 155 (260)
T 2qq5_A 83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY------- 155 (260)
T ss_dssp CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC-------
T ss_pred CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC-------
Confidence 78999999941 111 111111 1 1111 12346789999999875431
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 194 E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
.+. ..|+.+|...|.+.+.+ + +.+++||.+..+-
T Consensus 156 -----~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 156 -----MFN--VPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp -----CSS--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred -----CCC--CchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 122 58999999999877643 3 6889999998764
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.06 E-value=2.8e-09 Score=92.84 Aligned_cols=167 Identities=11% Similarity=-0.039 Sum_probs=99.9
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh-------hh----hhC--CceeeccCc---c------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-------EL----INM--GITPSLKWT---E------ 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~-------~l----~~~--~i~~~~~d~---~------ 138 (272)
+..++++|||+ |.||++++++|.++ |++|++++|+.++.+ .. ... .+..+..|. +
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARD--GANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 34578999997 99999999999999 999999999865421 11 111 233344442 1
Q ss_pred -----ccCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCC
Q 024143 139 -----ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGAC 192 (272)
Q Consensus 139 -----~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~ 192 (272)
....+|++||+|+...... +.+.+ +.++ +...+..++|++||...+....
T Consensus 82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---- 157 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW---- 157 (274)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH----
T ss_pred HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC----
Confidence 1348999999999643221 11111 1111 1234568999999987543210
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHH
Q 024143 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVN 263 (272)
Q Consensus 193 ~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dv 263 (272)
..+ ...|+.+|...+.+.+.+ + +..++||.+.... +... ..+ .....+...+|+
T Consensus 158 -----~~~--~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~---~~~~-~~~------~~~~~~~~pedv 220 (274)
T 3e03_A 158 -----WGA--HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD---AINM-LPG------VDAAACRRPEIM 220 (274)
T ss_dssp -----HHH--CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------C------CCGGGSBCTHHH
T ss_pred -----CCC--CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc---hhhh-ccc------ccccccCCHHHH
Confidence 001 157999999998877653 2 5778998543221 1111 111 112235678898
Q ss_pred HHHHHHHh
Q 024143 264 TLVLFIAS 271 (272)
Q Consensus 264 a~ai~~a~ 271 (272)
|++++..+
T Consensus 221 A~~v~~l~ 228 (274)
T 3e03_A 221 ADAAHAVL 228 (274)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88877654
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.04 E-value=3.5e-10 Score=97.01 Aligned_cols=168 Identities=11% Similarity=-0.018 Sum_probs=100.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE-ecCCcchhh----hhhCC--ceeeccCc---c----c-------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDE----LINMG--ITPSLKWT---E----A-------T 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~-~R~~~~~~~----l~~~~--i~~~~~d~---~----~-------~ 140 (272)
..++++|||+ |.||++++++|.++ |++|+++ .|+.++... +...+ +..+..|. + . .
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 3478999996 99999999999999 9999986 444443332 22222 22333332 1 0 1
Q ss_pred ------CCCCEEEEecCCCCCCC--------hHHHHH-H------HHHH-h---cCCCeEEEEecceeecCCCCCCCCCC
Q 024143 141 ------QKFPYVIFCAPPSRSLD--------YPGDVR-L------AALS-W---NGEGSFLFTSSSAIYDCSDNGACDED 195 (272)
Q Consensus 141 ------~~~D~Vi~~a~~~~~~~--------~~~~~~-~------l~~~-~---~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (272)
..+|++||+|+...... +.+.+. + +... . .+..++|++||...+...
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-------- 155 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL-------- 155 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC--------
T ss_pred cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC--------
Confidence 23899999999643221 111111 1 1111 1 124589999998764321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccH
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHY 260 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v 260 (272)
.. ...|+.+|...+.+.+.+ + +..++||.+..+-... ......... ....+...
T Consensus 156 ---~~--~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 224 (255)
T 3icc_A 156 ---PD--FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTIS------AFNRLGEV 224 (255)
T ss_dssp ---TT--BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTS------TTSSCBCH
T ss_pred ---CC--cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccC------CcCCCCCH
Confidence 11 258999999998876543 3 6789999998764221 111122211 12346789
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|++++..+
T Consensus 225 ~dva~~~~~l~ 235 (255)
T 3icc_A 225 EDIADTAAFLA 235 (255)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999887654
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.04 E-value=1.1e-09 Score=98.14 Aligned_cols=135 Identities=13% Similarity=0.009 Sum_probs=87.0
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hh--------CCceeeccCc---c----cc----
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN--------MGITPSLKWT---E----AT---- 140 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~--------~~i~~~~~d~---~----~~---- 140 (272)
++|||||+ |.||++++++|.++ |++|+.+.|+..+...+ .. ..+..+..|. + .+
T Consensus 3 k~vlVTGas~GIG~ala~~L~~~--G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 3 TVVLITGCSSGIGLHLAVRLASD--PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTC--TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 57999997 99999999999999 99998888765443221 11 2344444553 1 11
Q ss_pred -CCCCEEEEecCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 141 -QKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 141 -~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
..+|+|||+|+...... +.+.+ ..+. +...+.+++|++||...+...
T Consensus 81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~----------- 149 (327)
T 1jtv_A 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL----------- 149 (327)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC-----------
Confidence 25999999998643211 11111 1111 123467899999998754311
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
| ....|+.+|...|.+.+.+ + +++++|+.+..+-
T Consensus 150 -~-~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 150 -P-FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp -T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred -C-CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 1 1258999999999877643 3 6889999987653
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.03 E-value=5.3e-09 Score=99.21 Aligned_cols=165 Identities=16% Similarity=0.108 Sum_probs=103.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCC-eEEEEecCCcc---h----hhhhhCC--ceeeccCc---c----cc--CC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADH---H----DELINMG--ITPSLKWT---E----AT--QK 142 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~-~V~~~~R~~~~---~----~~l~~~~--i~~~~~d~---~----~~--~~ 142 (272)
..+++||||+ |+||.++++.|.++ |+ +|+.+.|+... . ..+...+ +..+.+|. + .+ ..
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ 335 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAE--GAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYP 335 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC--CCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence 3468999996 99999999999999 99 58888997532 1 2233334 34444553 1 23 35
Q ss_pred CCEEEEecCCCCCCC--------hHH-------HHHHHHH--Hhc-CCCeEEEEecce-eecCCCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAAL--SWN-GEGSFLFTSSSA-IYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~~--~~~-gvkr~V~~SS~~-vYg~~~~~~~~E~~p~~p~~~ 203 (272)
+|+|||+|+...... +.. ...++.. ... +.++||++||.. +||.. . .
T Consensus 336 ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~------------g--~ 401 (511)
T 2z5l_A 336 PNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA------------G--Q 401 (511)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT------------T--B
T ss_pred CcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC------------C--C
Confidence 999999999754321 111 1111221 122 578999999974 44421 1 1
Q ss_pred ChHHHHHHHHHHHHHHc---C--eeEEeeCceecCCC--cHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 204 SPRTDVLLKAEKVILEF---G--GCVLRLAGLYKADR--GAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~---~--~~IlRp~~iyG~~~--~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..|+.+|...|.+.++. + +++++|+.+.+.+. ......+.+ ....+++.+|+++++..++
T Consensus 402 ~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~~~~~~~--------~g~~~l~~e~~a~~l~~al 468 (511)
T 2z5l_A 402 GAYAAANAALDALAERRRAAGLPATSVAWGLWGGGGMAAGAGEESLSR--------RGLRAMDPDAAVDALLGAM 468 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHHHHHHHH--------HTBCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCcccccccHHHHHh--------cCCCCCCHHHHHHHHHHHH
Confidence 58999999999877653 3 78999998743221 111111211 1134688999999888765
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.02 E-value=1.4e-08 Score=87.62 Aligned_cols=170 Identities=9% Similarity=-0.050 Sum_probs=104.4
Q ss_pred CCCeEEEEc-C--cHHHHHHHHHHHhcCCCCeEEEEecCCcch-----hhhhh---CCceeeccCc---c----------
Q 024143 83 GENDLLIVG-P--GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-----DELIN---MGITPSLKWT---E---------- 138 (272)
Q Consensus 83 ~~~~IlItG-a--GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~-----~~l~~---~~i~~~~~d~---~---------- 138 (272)
..++++||| + |.||++++++|.++ |++|++++|+..+. ..+.. ..+..+..|. +
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEM--GAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHT--SCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence 447899998 4 59999999999999 99999998876543 12211 1233444442 1
Q ss_pred -ccCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 139 -ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
....+|+|||+|+...... +.+.+ +.++ ....+..++|++||...+....
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 168 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF-------- 168 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCS--------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCC--------
Confidence 2357899999998643211 11111 1111 1234578999999977542210
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc----C----eeEEeeCceecCCCcH----HHHHHHcCcccCCCCcccccccHHHHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYEVNT 264 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~----~----~~IlRp~~iyG~~~~~----~~~~l~~g~~~~~~~~~~~~I~v~Dva 264 (272)
+.....|+.+|...|.+.+.+ + ...+.||.+..+-... ....+.... ....+.+.+|+|
T Consensus 169 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~------~~~r~~~~~dva 239 (267)
T 3gdg_A 169 ---PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMI------PMGRDGLAKELK 239 (267)
T ss_dssp ---SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTTS------TTSSCEETHHHH
T ss_pred ---CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHhcC------CCCCCcCHHHHH
Confidence 111268999999999877653 2 5678899887653221 111122221 223467889999
Q ss_pred HHHHHHh
Q 024143 265 LVLFIAS 271 (272)
Q Consensus 265 ~ai~~a~ 271 (272)
++++..+
T Consensus 240 ~~~~~l~ 246 (267)
T 3gdg_A 240 GAYVYFA 246 (267)
T ss_dssp HHHHHHH
T ss_pred hHhheee
Confidence 9987654
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.4e-09 Score=95.50 Aligned_cols=168 Identities=13% Similarity=0.081 Sum_probs=98.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC----------Ccchhh----hhhCC--ceeeccCc---c----
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT----------ADHHDE----LINMG--ITPSLKWT---E---- 138 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~----------~~~~~~----l~~~~--i~~~~~d~---~---- 138 (272)
..+++||||+ |.||++++++|.++ |++|++++|+ .+..+. +...+ +..+..|. +
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 3468999996 99999999999999 9999999986 333322 22222 33344443 1
Q ss_pred -------ccCCCCEEEEecCCCCCCC--------hHHHHH-H------HH------HH---hcC---CCeEEEEecceee
Q 024143 139 -------ATQKFPYVIFCAPPSRSLD--------YPGDVR-L------AA------LS---WNG---EGSFLFTSSSAIY 184 (272)
Q Consensus 139 -------~~~~~D~Vi~~a~~~~~~~--------~~~~~~-~------l~------~~---~~g---vkr~V~~SS~~vY 184 (272)
...++|++||+|+...... +.+.+. + +. .. ..+ -.++|++||...+
T Consensus 104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~ 183 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL 183 (322)
T ss_dssp HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence 1248999999999654221 111110 0 11 01 111 2599999998765
Q ss_pred cCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCccc
Q 024143 185 DCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHIL 255 (272)
Q Consensus 185 g~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~ 255 (272)
.... +. ..|+.+|...|.+.+.+ + +..++|+ +..+...... . .....+....
T Consensus 184 ~~~~-----------~~--~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~----~-~~~~~~~~~~ 244 (322)
T 3qlj_A 184 QGSV-----------GQ--GNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVF----A-EMMATQDQDF 244 (322)
T ss_dssp HCBT-----------TC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSC----C-C--------C
T ss_pred cCCC-----------CC--ccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhh----h-hhhhcccccc
Confidence 3211 12 58999999999877653 3 5778998 5433211100 0 0011122234
Q ss_pred ccccHHHHHHHHHHHh
Q 024143 256 NLIHYEVNTLVLFIAS 271 (272)
Q Consensus 256 ~~I~v~Dva~ai~~a~ 271 (272)
.++..+|+|++++..+
T Consensus 245 ~~~~pedva~~v~~L~ 260 (322)
T 3qlj_A 245 DAMAPENVSPLVVWLG 260 (322)
T ss_dssp CTTCGGGTHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHh
Confidence 5678899999887654
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=3.3e-08 Score=85.19 Aligned_cols=164 Identities=9% Similarity=0.035 Sum_probs=101.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCC--ceeeccCc--------------cccCCCCEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG--ITPSLKWT--------------EATQKFPYVI 147 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~--i~~~~~d~--------------~~~~~~D~Vi 147 (272)
|+|||||+ +-||+.++++|.++ |++|+..+|++++...+...+ +..+.+|. +.+.++|++|
T Consensus 3 K~vlVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV 80 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEA--GDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV 80 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 67999996 89999999999999 999999999987766655433 33444442 1346899999
Q ss_pred EecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 148 FCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 148 ~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
|+|+...... |.+.+ +.++ +.+. -.++|++||...+... |. ...|
T Consensus 81 NNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~------------~~-~~~Y 146 (247)
T 3ged_A 81 NNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSE------------PD-SEAY 146 (247)
T ss_dssp ECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCC------------TT-CHHH
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCC------------CC-CHHH
Confidence 9998644321 21111 1111 1222 3799999997643211 11 2589
Q ss_pred HHHHHHHHHHHHHc----C----eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 207 TDVLLKAEKVILEF----G----GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 207 ~~sk~~aE~~l~~~----~----~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
+.+|...+.+.+.. + +-.+-||.+--+....+.....+..|.++ +...+|+|.+++..
T Consensus 147 ~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~~~~~~~Pl~R------~g~pediA~~v~fL 212 (247)
T 3ged_A 147 ASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQEDCAAIPAGK------VGTPKDISNMVLFL 212 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CCHHHHHTSTTSS------CBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHHHHHHhcCCCCC------CcCHHHHHHHHHHH
Confidence 99999888766543 2 45688998865432221112222222221 45578888877643
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.9e-09 Score=93.31 Aligned_cols=171 Identities=12% Similarity=0.027 Sum_probs=95.3
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch---hh----hhhCC--ceeeccCc---c----------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH---DE----LINMG--ITPSLKWT---E---------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~---~~----l~~~~--i~~~~~d~---~---------- 138 (272)
+..+++||||+ |.||++++++|.++ |++|+++.|..... +. +...+ +..+..|. +
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALE--SVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTS--SCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 34478999996 99999999999999 99999998764332 22 22222 33344443 1
Q ss_pred -ccCCCCEEEEecCCCCCCC--------hHHHHH-HH------HH-Hh---cCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 139 -ATQKFPYVIFCAPPSRSLD--------YPGDVR-LA------AL-SW---NGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~~--------~~~~~~-~l------~~-~~---~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
...++|++||+|+...... +.+.+. ++ .. .. .+..++|++||...+....
T Consensus 87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~---------- 156 (262)
T 3ksu_A 87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG---------- 156 (262)
T ss_dssp HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC----------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC----------
Confidence 1347999999999643221 111111 11 11 11 1346899999987664321
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCc---ccCCCCcccccccHHHHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGT---VDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~---~~~~~~~~~~~I~v~Dva~a 266 (272)
.. ..|+.+|...+.+.+.+ + +..++||.+..+. ........ ..........+...+|+|++
T Consensus 157 -~~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~----~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~ 229 (262)
T 3ksu_A 157 -FY--STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSF----FYGQETKESTAFHKSQAMGNQLTKIEDIAPI 229 (262)
T ss_dssp -CC--CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHH----HHTCC------------CCCCSCCGGGTHHH
T ss_pred -CC--chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc----ccccCchHHHHHHHhcCcccCCCCHHHHHHH
Confidence 11 47899999888776643 2 5778999885431 10000000 00111122346778999998
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 230 v~~L~ 234 (262)
T 3ksu_A 230 IKFLT 234 (262)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 87654
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.1e-08 Score=88.12 Aligned_cols=170 Identities=9% Similarity=-0.054 Sum_probs=100.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHh---cCCCCeEEEEecCCcchhhhhh--------CCceeeccCc---c--------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQ---EHPGCQIYGQTMTADHHDELIN--------MGITPSLKWT---E--------A 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~---~~~g~~V~~~~R~~~~~~~l~~--------~~i~~~~~d~---~--------~ 139 (272)
..++++|||+ |.||++++++|.+ + |++|++++|++++.+.+.. ..+..+..|. + .
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSP--GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCT--TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcC--CCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence 3468999996 9999999999999 8 9999999998765543321 1234444442 1 1
Q ss_pred c-----CCCC--EEEEecCCCCC--------CC---hHHHHH-------HHHH------Hhc--CCCeEEEEecceeecC
Q 024143 140 T-----QKFP--YVIFCAPPSRS--------LD---YPGDVR-------LAAL------SWN--GEGSFLFTSSSAIYDC 186 (272)
Q Consensus 140 ~-----~~~D--~Vi~~a~~~~~--------~~---~~~~~~-------~l~~------~~~--gvkr~V~~SS~~vYg~ 186 (272)
. ..+| ++||+|+.... .. +.+.+. .+.. ... +..++|++||...|..
T Consensus 83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 162 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP 162 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence 1 2568 99999986321 11 111111 1110 112 3468999999876532
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc----C---eeEEeeCceecCCCcHHHHHHHc---Cc-c---cCCCC
Q 024143 187 SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G---GCVLRLAGLYKADRGAHVYWLQK---GT-V---DSRPD 252 (272)
Q Consensus 187 ~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~----~---~~IlRp~~iyG~~~~~~~~~l~~---g~-~---~~~~~ 252 (272)
. .+. ..|+.+|...|.+.+.+ + +..+.||.+-.+ +...+.. .. . .....
T Consensus 163 ~-----------~~~--~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~----~~~~~~~~~~~~~~~~~~~~~~ 225 (259)
T 1oaa_A 163 Y-----------KGW--GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND----MQQLARETSKDPELRSKLQKLK 225 (259)
T ss_dssp C-----------TTC--HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH----HHHHHHHHCSCHHHHHHHHHHH
T ss_pred C-----------CCc--cHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc----hHHHHhhccCChhHHHHHHHhh
Confidence 1 112 58999999999887654 2 466788876432 1111110 00 0 00000
Q ss_pred cccccccHHHHHHHHHHHh
Q 024143 253 HILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 253 ~~~~~I~v~Dva~ai~~a~ 271 (272)
....+...+|+|++++.++
T Consensus 226 p~~~~~~p~dvA~~v~~l~ 244 (259)
T 1oaa_A 226 SDGALVDCGTSAQKLLGLL 244 (259)
T ss_dssp HTTCSBCHHHHHHHHHHHH
T ss_pred hcCCcCCHHHHHHHHHHHH
Confidence 1123678999999987654
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.5e-07 Score=80.73 Aligned_cols=167 Identities=15% Similarity=0.047 Sum_probs=104.3
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc----------cccCCCCEEEEec
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----------EATQKFPYVIFCA 150 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~----------~~~~~~D~Vi~~a 150 (272)
+.-|++||||+ +-||+.++++|.++ |.+|++.+|++++........+.....|. +.+.+.|++||+|
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~--Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNA 86 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAEL--GAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNA 86 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECC
Confidence 34578999996 89999999999999 99999999998776543333444444443 2466899999999
Q ss_pred CCCCCC-C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHH
Q 024143 151 PPSRSL-D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLL 211 (272)
Q Consensus 151 ~~~~~~-~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~ 211 (272)
+..... + |.+.+ +.++ +.+. -.++|.+||...+-.. | ....|+.+|.
T Consensus 87 Gi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~------------~-~~~~Y~asKa 152 (242)
T 4b79_A 87 GISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGS------------A-DRPAYSASKG 152 (242)
T ss_dssp CCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCC------------S-SCHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCC------------C-CCHHHHHHHH
Confidence 964321 1 21111 1111 1222 3799999997642111 1 1258999999
Q ss_pred HHHHHHHHc-------C--eeEEeeCceecCCCc------HHHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 212 KAEKVILEF-------G--GCVLRLAGLYKADRG------AHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 212 ~aE~~l~~~-------~--~~IlRp~~iyG~~~~------~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
..+.+.+.. + +-.+-||.+.-|-.. .....+.+..|.++ +-..+|+|.+++..
T Consensus 153 av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR------~g~peeiA~~v~fL 220 (242)
T 4b79_A 153 AIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR------WGEAPEVASAAAFL 220 (242)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCS------CBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCC------CcCHHHHHHHHHHH
Confidence 988776543 2 456889988654211 11222333333222 45678998887654
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=2e-08 Score=89.59 Aligned_cols=133 Identities=17% Similarity=0.139 Sum_probs=84.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec---------CCcchhh----hhhCCce--eeccCcc-------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM---------TADHHDE----LINMGIT--PSLKWTE------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R---------~~~~~~~----l~~~~i~--~~~~d~~------- 138 (272)
+..++++|||+ |.||++++++|.++ |++|++.+| +.++.+. +...+.. ....+.+
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~--Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~ 84 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK 84 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHH
Confidence 34478999997 99999999999999 999999765 3333222 2222211 1222221
Q ss_pred ----ccCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecce-eecCCCCCCC
Q 024143 139 ----ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSA-IYDCSDNGAC 192 (272)
Q Consensus 139 ----~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~-vYg~~~~~~~ 192 (272)
...++|+|||+|+...... +...+ +.++ +...+.+++|++||.. .|+..
T Consensus 85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~----- 159 (319)
T 1gz6_A 85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF----- 159 (319)
T ss_dssp HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC-----
Confidence 2347999999998643221 11111 1111 1234678999999974 34421
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCce
Q 024143 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGL 230 (272)
Q Consensus 193 ~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~i 230 (272)
+. ..|+.+|+..+.+.+.+ + +.+++|+.+
T Consensus 160 -------~~--~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 160 -------GQ--ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 197 (319)
T ss_dssp -------TC--HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred -------CC--HHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence 12 58999999998876643 3 678999986
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.80 E-value=9.6e-09 Score=77.12 Aligned_cols=68 Identities=21% Similarity=0.242 Sum_probs=55.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~ 152 (272)
+|++|+|+|+|++|+.+++.|.+. | ++|++++|++++.+.+...++.....|. +.+.++|+||++++.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~ 79 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTS--SNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPF 79 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHC--SSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCG
T ss_pred CcCeEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCc
Confidence 357899999999999999999999 9 9999999998887776656666655543 246799999999964
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.78 E-value=2.9e-08 Score=86.03 Aligned_cols=134 Identities=13% Similarity=-0.020 Sum_probs=84.9
Q ss_pred CCeEEEEc---CcHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhhhhhC---CceeeccCc---c-----------ccC-
Q 024143 84 ENDLLIVG---PGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINM---GITPSLKWT---E-----------ATQ- 141 (272)
Q Consensus 84 ~~~IlItG---aGfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~l~~~---~i~~~~~d~---~-----------~~~- 141 (272)
.++++||| +|.||++++++|.++ |++|++++|++++ .+.+... .+..+..|. + ...
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 84 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 46899998 489999999999999 9999999998754 2333221 233444442 1 123
Q ss_pred --CCCEEEEecCCCC-----CCC--------hHHHHH-------HHHH-Hh---cCCCeEEEEecceeecCCCCCCCCCC
Q 024143 142 --KFPYVIFCAPPSR-----SLD--------YPGDVR-------LAAL-SW---NGEGSFLFTSSSAIYDCSDNGACDED 195 (272)
Q Consensus 142 --~~D~Vi~~a~~~~-----~~~--------~~~~~~-------~l~~-~~---~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (272)
++|++||+|+... ... +.+.+. .+.. .. ....++|++||...++.
T Consensus 85 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~--------- 155 (269)
T 2h7i_A 85 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM--------- 155 (269)
T ss_dssp TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC---------
T ss_pred CCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccccc---------
Confidence 7999999998643 111 111111 1111 11 11258999998654221
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
.. ...|+.+|...|.+.+.+ + +..++||.+..+
T Consensus 156 ---~~--~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (269)
T 2h7i_A 156 ---PA--YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL 197 (269)
T ss_dssp ---TT--THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred ---Cc--hHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence 11 258999999998776643 3 678999988643
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.74 E-value=1.5e-07 Score=87.93 Aligned_cols=172 Identities=10% Similarity=-0.016 Sum_probs=99.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc--hhh-hhhCCceeeccCc---c-----------ccCC-C
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDE-LINMGITPSLKWT---E-----------ATQK-F 143 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~--~~~-l~~~~i~~~~~d~---~-----------~~~~-~ 143 (272)
..+++||||+ |.||+++++.|.++ |++|++++|+... ... ....++..+.+|. + ...+ +
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~--Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~i 289 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARD--GATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKV 289 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCc
Confidence 4568999996 99999999999999 9999999986432 111 1223445554442 1 1224 9
Q ss_pred CEEEEecCCCCCCC--------hHHHH-------HHHHH------HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSLD--------YPGDV-------RLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-------~~l~~------~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
|+|||+|+...... +.+.+ .++.. ...+..+||++||...+-... .
T Consensus 290 d~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~-----------g-- 356 (454)
T 3u0b_A 290 DILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR-----------G-- 356 (454)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT-----------T--
T ss_pred eEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC-----------C--
Confidence 99999999754321 11111 11111 112567999999987543211 1
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
...|+.+|...+.+.+.+ + +..+.||.+..+........ .............+...+|+|++++..+
T Consensus 357 ~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~l~r~g~pedvA~~v~fL~ 432 (454)
T 3u0b_A 357 QTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA--TREVGRRLNSLFQGGQPVDVAELIAYFA 432 (454)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------------CHHHHHSBTTSSCBCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh--hHHHHHhhccccCCCCHHHHHHHHHHHh
Confidence 258999999777665542 3 67899999976532211100 0000000011122457889999887553
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.73 E-value=2.1e-07 Score=80.44 Aligned_cols=136 Identities=16% Similarity=0.095 Sum_probs=89.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhhCC--ceeeccCc--------------cccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG--ITPSLKWT--------------EATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~~~--i~~~~~d~--------------~~~~ 141 (272)
..|+++|||+ +-||+.++++|.++ |.+|+..+|++++.++ +...+ +..+..|. +.+.
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAA--GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 4478999996 89999999999999 9999999998766543 33333 33334442 1345
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-----------HHHH---HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~---~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
++|++||+|+...... |.+.+ +.++ ..+.+-.++|.+||...+...
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~------------ 153 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR------------ 153 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC------------
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC------------
Confidence 8999999998654321 21111 1111 123456799999998743211
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
|. ...|+.+|...+.+.+.. + +-.+-||.+.-+
T Consensus 154 ~~-~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~ 195 (255)
T 4g81_D 154 PT-VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTD 195 (255)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCG
T ss_pred CC-chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 11 258999999888776643 2 456889988654
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.67 E-value=6.3e-07 Score=77.21 Aligned_cols=168 Identities=10% Similarity=-0.081 Sum_probs=99.8
Q ss_pred cCCCeEEEEcC-c--HHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-------CCceeeccCc---c----------
Q 024143 82 VGENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPSLKWT---E---------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-G--fiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-------~~i~~~~~d~---~---------- 138 (272)
+..|+++|||+ | =||+.++++|.++ |++|+..+|+++..+++.. ..+..+..|. +
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 34578999996 5 5999999999999 9999999998766544321 1234444442 1
Q ss_pred -ccCCCCEEEEecCCCCCC-------C-hHHHHH-----HH----HH------HhcCCCeEEEEecceeecCCCCCCCCC
Q 024143 139 -ATQKFPYVIFCAPPSRSL-------D-YPGDVR-----LA----AL------SWNGEGSFLFTSSSAIYDCSDNGACDE 194 (272)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~-------~-~~~~~~-----~l----~~------~~~gvkr~V~~SS~~vYg~~~~~~~~E 194 (272)
.+..+|++||+|+..... + ..+... ++ .. ...+-.++|++||....-.
T Consensus 82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~-------- 153 (256)
T 4fs3_A 82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA-------- 153 (256)
T ss_dssp HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC--------
T ss_pred HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC--------
Confidence 245899999999853211 1 111111 10 00 1112358999999763211
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc------HHHHHHHcCcccCCCCccccccc
Q 024143 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG------AHVYWLQKGTVDSRPDHILNLIH 259 (272)
Q Consensus 195 ~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~------~~~~~l~~g~~~~~~~~~~~~I~ 259 (272)
.| ....|+.+|...+.+.+.. + +-.+.||.+--+... .....+.+..|.++ +..
T Consensus 154 ----~~-~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R------~g~ 222 (256)
T 4fs3_A 154 ----VQ-NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKR------NVD 222 (256)
T ss_dssp ----CT-TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSS------CCC
T ss_pred ----cc-cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCC------CcC
Confidence 01 1258999999888766543 2 567889987543211 11122222223222 345
Q ss_pred HHHHHHHHHHH
Q 024143 260 YEVNTLVLFIA 270 (272)
Q Consensus 260 v~Dva~ai~~a 270 (272)
.+|+|.+++..
T Consensus 223 peevA~~v~fL 233 (256)
T 4fs3_A 223 QVEVGKTAAYL 233 (256)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 78888887644
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=1.3e-06 Score=76.55 Aligned_cols=169 Identities=11% Similarity=-0.041 Sum_probs=95.7
Q ss_pred CCCeEEEEcC---cHHHHHHHHHHHhcCCCCeEEEEecCC-----------cchhhhhhC--C-----ceeec-------
Q 024143 83 GENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTA-----------DHHDELINM--G-----ITPSL------- 134 (272)
Q Consensus 83 ~~~~IlItGa---GfiG~~l~~~L~~~~~g~~V~~~~R~~-----------~~~~~l~~~--~-----i~~~~------- 134 (272)
..+++||||+ |.||++++++|.++ |++|++++|++ ++.+.+... + .....
T Consensus 7 ~~k~~lVTGas~~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (297)
T 1d7o_A 7 RGKRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN 84 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence 3468999984 79999999999999 99999987532 222211110 0 01000
Q ss_pred -----c---C--------cc-----------ccCCCCEEEEecCCCC--CC---C-----hHHHHH-H------HHH-Hh
Q 024143 135 -----K---W--------TE-----------ATQKFPYVIFCAPPSR--SL---D-----YPGDVR-L------AAL-SW 169 (272)
Q Consensus 135 -----~---d--------~~-----------~~~~~D~Vi~~a~~~~--~~---~-----~~~~~~-~------l~~-~~ 169 (272)
. | .+ ...++|++||+|+... .. + +.+.+. | +.. ..
T Consensus 85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 164 (297)
T 1d7o_A 85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL 164 (297)
T ss_dssp GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 0 0 11 1347899999997431 11 1 111111 1 111 11
Q ss_pred c---CCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH--------cC--eeEEeeCceecCCCc
Q 024143 170 N---GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE--------FG--GCVLRLAGLYKADRG 236 (272)
Q Consensus 170 ~---gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~--------~~--~~IlRp~~iyG~~~~ 236 (272)
. ..+++|++||...+... |.....|+.+|...+.+.+. .+ +..++|+.++.+...
T Consensus 165 ~~m~~~g~iv~isS~~~~~~~------------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~ 232 (297)
T 1d7o_A 165 PIMNPGGASISLTYIASERII------------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAK 232 (297)
T ss_dssp GGEEEEEEEEEEECGGGTSCC------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSS
T ss_pred HHhccCceEEEEeccccccCC------------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhh
Confidence 1 12689999997654211 11013799999988876542 34 678999999987532
Q ss_pred H------HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 237 A------HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 237 ~------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
. ....+....+. ..+...+|+|++++..+
T Consensus 233 ~~~~~~~~~~~~~~~~p~------~r~~~pedvA~~v~~l~ 267 (297)
T 1d7o_A 233 AIGFIDTMIEYSYNNAPI------QKTLTADEVGNAAAFLV 267 (297)
T ss_dssp CCSHHHHHHHHHHHHSSS------CCCBCHHHHHHHHHHHT
T ss_pred hccccHHHHHHhhccCCC------CCCCCHHHHHHHHHHHh
Confidence 1 11111111111 12568899999987654
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.2e-06 Score=76.33 Aligned_cols=137 Identities=15% Similarity=0.105 Sum_probs=86.9
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-C--CceeeccCc---c-----------ccCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M--GITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~--~i~~~~~d~---~-----------~~~~~ 143 (272)
+..|.+||||+ +-||+.++++|.++ |.+|++.+|++++++.... . ....+..|. + .+.++
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 33467999996 88999999999999 9999999999877654322 1 233344442 1 24579
Q ss_pred CEEEEecCCCCCC---C-----hHHHHH-HH---H-HH------hcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSL---D-----YPGDVR-LA---A-LS------WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~~~-~l---~-~~------~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
|++|++|+..... + |.+.+. ++ + .+ ...-.++|.+||...+-.. |. ..
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~------------~~-~~ 171 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT------------PA-FS 171 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC------------TT-CH
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC------------CC-ch
Confidence 9999999864321 1 222111 11 1 01 0123589999987643211 11 25
Q ss_pred hHHHHHHHHHHHHHHc----C-----eeEEeeCceecC
Q 024143 205 PRTDVLLKAEKVILEF----G-----GCVLRLAGLYKA 233 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~----~-----~~IlRp~~iyG~ 233 (272)
.|+.+|...+.+.+.. + +-.+-||.+.-+
T Consensus 172 ~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~ 209 (273)
T 4fgs_A 172 VYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETT 209 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC-
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCh
Confidence 8999999988776543 2 456889988654
|
| >2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.3e-09 Score=82.00 Aligned_cols=60 Identities=10% Similarity=0.020 Sum_probs=48.7
Q ss_pred CcceeeecccCcc--cccccccccCCcchhhhcc-cccccccc---ccccceeccccccccccccc
Q 024143 1 MGTISCTNTVSLN--GACTRFFAADSLSSKASSV-FFNNRTWK---LKLRPLVASSSSSSMATNFQ 60 (272)
Q Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 60 (272)
|+.||+.++.+.. ...++||++||||++|-+| -+||+.++ +++..+|.++|...|+..+.
T Consensus 30 La~iW~~vL~~~~~i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~ 95 (110)
T 2cq8_A 30 VRSVWQRILPKVLEVEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLV 95 (110)
T ss_dssp HHHHHHHHCSSCSCCCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCCCHHhcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHH
Confidence 4679999997222 2229999999999999999 99999875 55669999999999987663
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=4.9e-06 Score=71.94 Aligned_cols=135 Identities=12% Similarity=0.026 Sum_probs=87.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh---hhC--CceeeccCc--------------cccCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL---INM--GITPSLKWT--------------EATQK 142 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l---~~~--~i~~~~~d~--------------~~~~~ 142 (272)
..|++||||+ +-||+.++++|.++ |.+|++.+|+.++...+ ... ....+..|. +.+.+
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~--Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~ 83 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEE--RAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGR 83 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 4478999996 89999999999999 99999999987654322 222 233344442 12468
Q ss_pred CCEEEEecCCCCCC--C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSL--D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~--~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
.|++||+|+..... + |.+.+ +..+ +.. +-.++|.+||...+... | .
T Consensus 84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~-~~G~IVnisS~~~~~~~------------~-~ 149 (258)
T 4gkb_A 84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKA-TRGAIVNISSKTAVTGQ------------G-N 149 (258)
T ss_dssp CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCTHHHHCC------------S-S
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCeEEEEeehhhccCC------------C-C
Confidence 99999999864321 1 21111 1111 112 23799999998754321 1 1
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
...|+.+|...+.+.+.. + +-.+-||.+.-+
T Consensus 150 ~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~ 189 (258)
T 4gkb_A 150 TSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTP 189 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCS
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCh
Confidence 158999999988776543 2 467889988654
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.2e-06 Score=75.73 Aligned_cols=137 Identities=12% Similarity=0.129 Sum_probs=89.4
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC--ceeeccCc---c-----------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------AT 140 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~--i~~~~~d~---~-----------~~ 140 (272)
+..|.++|||+ +-||+.++++|.++ |.+|+..+|++++.+++ ...+ +..+..|. + .+
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34578999996 88999999999999 99999999987765443 2333 33344442 1 24
Q ss_pred CCCCEEEEecCCCCC-C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~-~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.+.|++||+|+.... . + |.+.+ +.++ +.+.+-.++|++||..-+-..
T Consensus 83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~----------- 151 (254)
T 4fn4_A 83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG----------- 151 (254)
T ss_dssp SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS-----------
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC-----------
Confidence 689999999985321 1 1 21111 1111 134456799999997642111
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
| ....|+.+|.....+.+.. + +-.+-||.+--+
T Consensus 152 -~-~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~ 193 (254)
T 4fn4_A 152 -F-AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTN 193 (254)
T ss_dssp -S-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred -C-CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCc
Confidence 1 1258999999888766543 2 456889988544
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=8.1e-07 Score=83.85 Aligned_cols=134 Identities=17% Similarity=0.164 Sum_probs=86.0
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCC-eEEEEecCCcc---hh----hhhhCC--ceeeccCc---c----c---c---
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADH---HD----ELINMG--ITPSLKWT---E----A---T--- 140 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~-~V~~~~R~~~~---~~----~l~~~~--i~~~~~d~---~----~---~--- 140 (272)
+++||||+ |.||.++++.|.++ |+ +|+.+.|+... .. .+...+ +..+.+|. + . +
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~--Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 317 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQ--GAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED 317 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred CEEEEECCCCchHHHHHHHHHHC--CCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 68999986 99999999999999 98 78888886322 22 233334 33444443 1 1 1
Q ss_pred CCCCEEEEecCCC-CCC---C-hHHHH-----------HHHHH--HhcCCCeEEEEecceee-cCCCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPS-RSL---D-YPGDV-----------RLAAL--SWNGEGSFLFTSSSAIY-DCSDNGACDEDSPVVPI 201 (272)
Q Consensus 141 ~~~D~Vi~~a~~~-~~~---~-~~~~~-----------~~l~~--~~~gvkr~V~~SS~~vY-g~~~~~~~~E~~p~~p~ 201 (272)
..+|+|||+|+.. ... + -.+.+ .++.. ...+.++||++||...+ |..
T Consensus 318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~-------------- 383 (496)
T 3mje_A 318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSG-------------- 383 (496)
T ss_dssp SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCT--------------
T ss_pred CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCC--------------
Confidence 2589999999965 221 1 01111 11211 23357899999997643 321
Q ss_pred CCChHHHHHHHHHHHHHHc---C--eeEEeeCceecCC
Q 024143 202 GRSPRTDVLLKAEKVILEF---G--GCVLRLAGLYKAD 234 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~---~--~~IlRp~~iyG~~ 234 (272)
+...|+.+|...+.+.++. + ++.+.|+.+.+.+
T Consensus 384 g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~g 421 (496)
T 3mje_A 384 GQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVG 421 (496)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSC
T ss_pred CcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCc
Confidence 1258999999888776653 4 7889999887654
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=1.1e-06 Score=76.07 Aligned_cols=135 Identities=10% Similarity=0.029 Sum_probs=84.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-----------cccCCCCEEEEec
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----------EATQKFPYVIFCA 150 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-----------~~~~~~D~Vi~~a 150 (272)
.-|++||||+ +-||+.++++|.++ |++|++.+|+..+... ....+.....|. +.+.++|++||+|
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnA 86 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLEL--GAQVLTTARARPEGLP-EELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHML 86 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHT--TCEEEEEESSCCTTSC-TTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECC
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHc--CCEEEEEECCchhCCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3478999996 89999999999999 9999999997543210 011122222222 1356899999999
Q ss_pred CCCCC--C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 151 PPSRS--L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 151 ~~~~~--~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
+.... . + |.+.+ +.++ +.+.+-.++|++||...+-. .|.....|+
T Consensus 87 G~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~------------~~~~~~~Y~ 154 (261)
T 4h15_A 87 GGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP------------LPESTTAYA 154 (261)
T ss_dssp CCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------CTTTCHHHH
T ss_pred CCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC------------CCCccHHHH
Confidence 85321 1 1 21111 1111 13456679999999764211 111125799
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCceec
Q 024143 208 DVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (272)
Q Consensus 208 ~sk~~aE~~l~~~-------~--~~IlRp~~iyG 232 (272)
.+|...+.+.+.. + +-.+.||.+--
T Consensus 155 asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T 188 (261)
T 4h15_A 155 AAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIET 188 (261)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCC
Confidence 9999888776543 2 46688988853
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.51 E-value=2.7e-07 Score=71.92 Aligned_cols=67 Identities=10% Similarity=0.223 Sum_probs=56.1
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----ccCCCCEEEEecC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAP 151 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----~~~~~D~Vi~~a~ 151 (272)
.|++|+|+|+|++|+.+++.|.++ |++|+++++++++.+.+...+...+.+|. + ...++|+||.+.+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 467899999999999999999999 99999999999888777777777766664 1 2468999998877
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=4.6e-07 Score=70.07 Aligned_cols=96 Identities=9% Similarity=0.170 Sum_probs=65.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c----c-cCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----A-TQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~----~-~~~~D~Vi~~a~~~~ 154 (272)
.|++|+|+|+|.+|+.+++.|.+. |++|++++|++++.+.+...+.....+|. + + ..++|+||++++...
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 82 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI 82 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT--TCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCch
Confidence 457899999999999999999999 99999999987776655444555444442 1 1 568999999987531
Q ss_pred CCChHHHHHH-HHHHhcCCCeEEEEecceee
Q 024143 155 SLDYPGDVRL-AALSWNGEGSFLFTSSSAIY 184 (272)
Q Consensus 155 ~~~~~~~~~~-l~~~~~gvkr~V~~SS~~vY 184 (272)
...... ......+++++|..++...|
T Consensus 83 ----~~~~~~~~~~~~~~~~~ii~~~~~~~~ 109 (144)
T 2hmt_A 83 ----QASTLTTLLLKELDIPNIWVKAQNYYH 109 (144)
T ss_dssp ----HHHHHHHHHHHHTTCSEEEEECCSHHH
T ss_pred ----HHHHHHHHHHHHcCCCeEEEEeCCHHH
Confidence 111111 11234567777777765544
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.43 E-value=8.5e-07 Score=85.85 Aligned_cols=134 Identities=13% Similarity=0.044 Sum_probs=76.4
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec---------CCcchhh----hhhCCce--eeccCcc-------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM---------TADHHDE----LINMGIT--PSLKWTE------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R---------~~~~~~~----l~~~~i~--~~~~d~~------- 138 (272)
+..++++|||+ |.||++++++|.++ |++|++++| +.++.+. +...+.. ....|.+
T Consensus 17 l~gk~~lVTGas~GIG~aiA~~La~~--Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~ 94 (613)
T 3oml_A 17 YDGRVAVVTGAGAGLGREYALLFAER--GAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIE 94 (613)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHH
Confidence 45578999997 99999999999999 999999987 3333332 2222221 1222221
Q ss_pred ----ccCCCCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCC
Q 024143 139 ----ATQKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACD 193 (272)
Q Consensus 139 ----~~~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~ 193 (272)
....+|++||+|+..... + +...+ +.++ +...+..++|++||...+-...
T Consensus 95 ~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~----- 169 (613)
T 3oml_A 95 TAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF----- 169 (613)
T ss_dssp ----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT-----
T ss_pred HHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC-----
Confidence 234789999999964321 1 11111 1111 1344567999999976432110
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCce
Q 024143 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGL 230 (272)
Q Consensus 194 E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~i 230 (272)
. ...|+.+|...+.+.+.+ + +..+.|+.+
T Consensus 170 ------~--~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~ 207 (613)
T 3oml_A 170 ------G--QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA 207 (613)
T ss_dssp ------T--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred ------C--ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence 1 258999999998877653 2 567888754
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.42 E-value=5e-06 Score=71.41 Aligned_cols=168 Identities=15% Similarity=0.062 Sum_probs=100.4
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc--hhhhhhCC--ceeeccCc---c------ccCCCCEEE
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMG--ITPSLKWT---E------ATQKFPYVI 147 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~--~~~l~~~~--i~~~~~d~---~------~~~~~D~Vi 147 (272)
+.-|+++|||+ +-||+.+++.|.++ |.+|++.+|+..+ .+.+...+ ...+..|. + ...+.|++|
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV 84 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAA--GAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILV 84 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 45578999996 89999999999999 9999999997532 23333333 23333442 1 123689999
Q ss_pred EecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCh
Q 024143 148 FCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (272)
Q Consensus 148 ~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~ 205 (272)
|+|+...... |.+.+ +.++ +...+ -.++|.+||...+-.. | ....
T Consensus 85 NNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~------------~-~~~~ 151 (247)
T 4hp8_A 85 NNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG------------I-RVPS 151 (247)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------S-SCHH
T ss_pred ECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC------------C-CChH
Confidence 9998644321 21111 1111 11233 5799999997643211 1 1158
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 206 y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
|+.+|.....+.+.. + +-.+-||.+--|.... ....+.+..|.++ +-..+|+|.+++..
T Consensus 152 Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR------~g~peeiA~~v~fL 225 (247)
T 4hp8_A 152 YTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGR------WGHSEDIAGAAVFL 225 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSS------CBCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCC------CcCHHHHHHHHHHH
Confidence 999999888776543 2 4568899886443211 1112233233221 34568888887644
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.41 E-value=1.9e-06 Score=66.25 Aligned_cols=66 Identities=14% Similarity=0.088 Sum_probs=52.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc---c-----ccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~---~-----~~~~~D~Vi~~a~~ 152 (272)
|+|+|+|+|++|+.+++.|.+. |++|++++|++++.+.+.. .++..+.+|. + .+.++|+||++.+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~ 79 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGK 79 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCC
Confidence 6899999999999999999999 9999999998877666543 3665554442 1 25689999999764
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=2.8e-06 Score=67.31 Aligned_cols=95 Identities=14% Similarity=0.041 Sum_probs=64.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-hCCceeeccCc---c----c-cCCCCEEEEecCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWT---E----A-TQKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-~~~i~~~~~d~---~----~-~~~~D~Vi~~a~~~ 153 (272)
..++|+|+|+|.+|+.+++.|.+. |++|++++|++++.+.+. ..+...+.+|. + + +.++|+||.+.+..
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~--g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~ 95 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS--GHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD 95 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence 447899999999999999999999 999999999988877665 45665554442 1 2 56899999998742
Q ss_pred CCCChHHHHHHHHHHhcCCCeEEEEecce
Q 024143 154 RSLDYPGDVRLAALSWNGEGSFLFTSSSA 182 (272)
Q Consensus 154 ~~~~~~~~~~~l~~~~~gvkr~V~~SS~~ 182 (272)
. ....+..++....+..+++...+..
T Consensus 96 ~---~~~~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 96 S---TNFFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp H---HHHHHHHHHHHTSCCSEEEEECSSG
T ss_pred H---HHHHHHHHHHHHCCCCeEEEEECCH
Confidence 1 1111122222225666666665543
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.36 E-value=4.9e-06 Score=79.08 Aligned_cols=164 Identities=15% Similarity=0.054 Sum_probs=94.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCe-EEEE-ecCC-------------cch----hhhhhCC--ceeeccCc---c
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQ-TMTA-------------DHH----DELINMG--ITPSLKWT---E 138 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~-V~~~-~R~~-------------~~~----~~l~~~~--i~~~~~d~---~ 138 (272)
.+++||||+ |.||.++++.|.++ |++ |+.+ .|++ +.. ..+...+ +..+.+|. +
T Consensus 251 ~~~vLITGgsgGIG~~lA~~La~~--G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 328 (525)
T 3qp9_A 251 DGTVLVTGAEEPAAAEAARRLARD--GAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE 328 (525)
T ss_dssp TSEEEESSTTSHHHHHHHHHHHHH--TCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHc--CCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence 467999986 99999999999999 998 5555 6763 222 2232233 33444443 1
Q ss_pred ----c------cCCCCEEEEecCCCCCCC--------hHHHH-------HHHHH------HhcC-CCeEEEEecceeecC
Q 024143 139 ----A------TQKFPYVIFCAPPSRSLD--------YPGDV-------RLAAL------SWNG-EGSFLFTSSSAIYDC 186 (272)
Q Consensus 139 ----~------~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~~------~~~g-vkr~V~~SS~~vYg~ 186 (272)
. ...+|.|||+|+...... +.+.+ .++.. ...+ ..+||++||...+-.
T Consensus 329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g 408 (525)
T 3qp9_A 329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG 408 (525)
T ss_dssp HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence 1 235799999999643211 11111 11111 1122 679999999764321
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC-----eeEEeeCceecCCCc---HHHHHHHcCcccCCCCcccccc
Q 024143 187 SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-----GCVLRLAGLYKADRG---AHVYWLQKGTVDSRPDHILNLI 258 (272)
Q Consensus 187 ~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~-----~~IlRp~~iyG~~~~---~~~~~l~~g~~~~~~~~~~~~I 258 (272)
. + +...|+.+|...+.+..+.. ++.+.|+.+ +.+.. .....+.+. ....+
T Consensus 409 ~------------~-g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~-~tgm~~~~~~~~~~~~~--------g~~~l 466 (525)
T 3qp9_A 409 G------------A-GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW-EGSRVTEGATGERLRRL--------GLRPL 466 (525)
T ss_dssp C------------T-TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB-TTSGGGSSHHHHHHHHT--------TBCCB
T ss_pred C------------C-CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc-ccccccchhhHHHHHhc--------CCCCC
Confidence 1 1 12689999999998876653 688999988 32211 111112110 12346
Q ss_pred cHHHHHHHHHHHh
Q 024143 259 HYEVNTLVLFIAS 271 (272)
Q Consensus 259 ~v~Dva~ai~~a~ 271 (272)
..+++++++..++
T Consensus 467 ~pee~a~~l~~~l 479 (525)
T 3qp9_A 467 APATALTALDTAL 479 (525)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 6777777776654
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.25 E-value=2.8e-06 Score=66.20 Aligned_cols=67 Identities=24% Similarity=0.308 Sum_probs=56.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----ccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----~~~~~D~Vi~~a~~ 152 (272)
+++|+|+|+|.+|+.+++.|.+. |++|+++++++++.+.+...++..+.+|. + ...++|+||.+.+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCC
Confidence 36899999999999999999999 99999999999988888777888777764 1 24689999888764
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.22 E-value=3.6e-06 Score=75.22 Aligned_cols=96 Identities=16% Similarity=0.080 Sum_probs=61.0
Q ss_pred CCCeEEEEc-CcHHHHHHHHHHHhcCCC--CeEEEEecCCcc--hhhhhhCCc----eeecc--Cc-cccCCCCEEEEec
Q 024143 83 GENDLLIVG-PGVLGRLVAEQWRQEHPG--CQIYGQTMTADH--HDELINMGI----TPSLK--WT-EATQKFPYVIFCA 150 (272)
Q Consensus 83 ~~~~IlItG-aGfiG~~l~~~L~~~~~g--~~V~~~~R~~~~--~~~l~~~~i----~~~~~--d~-~~~~~~D~Vi~~a 150 (272)
+++||+|+| +|++|+.++..|.++ | ++|+.+++++++ ...+..... ..+.. |. ++++++|+|||++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~--g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~a 84 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMN--PLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPA 84 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHC--TTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcC
Confidence 346999999 599999999999998 7 899999987652 112322211 11111 22 4689999999999
Q ss_pred CCCCC-C----Ch----HHHHHHHHH--HhcCCCeEEEEec
Q 024143 151 PPSRS-L----DY----PGDVRLAAL--SWNGEGSFLFTSS 180 (272)
Q Consensus 151 ~~~~~-~----~~----~~~~~~l~~--~~~gvkr~V~~SS 180 (272)
+.... . ++ ...+++++. ...+++.+|+++|
T Consensus 85 g~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S 125 (326)
T 1smk_A 85 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS 125 (326)
T ss_dssp CCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 85432 1 11 122333331 3446788888876
|
| >4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus} | Back alignment and structure |
|---|
Probab=98.18 E-value=3.7e-08 Score=71.84 Aligned_cols=59 Identities=15% Similarity=0.079 Sum_probs=48.3
Q ss_pred cceeeecccCccccc-ccccccCCcchhhhcc-ccccccc--cccccceeccccccccccccc
Q 024143 2 GTISCTNTVSLNGAC-TRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNFQ 60 (272)
Q Consensus 2 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 60 (272)
..||+.++..-.-.. ++||++||||++|-|| -.+++.+ .+++..+|..+|...++..+.
T Consensus 22 ~~i~~~vL~~~~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~ 84 (93)
T 4i4d_A 22 AAIWAETLGRDSVGPHEDFAALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVH 84 (93)
T ss_dssp HHHHHHHHTCSCCCTTCCTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCCHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHH
Confidence 568999987511111 8999999999999999 9999987 888999999999888876654
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=2.5e-05 Score=68.99 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=29.6
Q ss_pred CCeEEEEcC---cHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 84 ~~~IlItGa---GfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
.++++|||+ |.||++++++|.++ |++|++++|+
T Consensus 9 gk~~lVTGa~~s~GIG~aia~~la~~--G~~Vv~~~r~ 44 (315)
T 2o2s_A 9 GQTAFVAGVADSHGYGWAIAKHLASA--GARVALGTWP 44 (315)
T ss_dssp TCEEEEECCSSSSSHHHHHHHHHHTT--TCEEEEEECH
T ss_pred CCEEEEeCCCCCCChHHHHHHHHHHC--CCEEEEEecc
Confidence 468999985 89999999999999 9999999864
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.13 E-value=2e-05 Score=69.59 Aligned_cols=95 Identities=13% Similarity=0.038 Sum_probs=60.1
Q ss_pred CeEEEEc-CcHHHHHHHHHHHhcCCCC--eEEEEec--CCcchhh----hhh-----CCceeeccCccccCCCCEEEEec
Q 024143 85 NDLLIVG-PGVLGRLVAEQWRQEHPGC--QIYGQTM--TADHHDE----LIN-----MGITPSLKWTEATQKFPYVIFCA 150 (272)
Q Consensus 85 ~~IlItG-aGfiG~~l~~~L~~~~~g~--~V~~~~R--~~~~~~~----l~~-----~~i~~~~~d~~~~~~~D~Vi~~a 150 (272)
+||+||| +|++|++++..|+.+ ++ ++..+++ .+++.+. +.. ..+.....+.++++++|+|||++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~--~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~a 78 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR--DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITA 78 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcC
Confidence 5899999 699999999999988 65 6888888 5443321 111 11222223446789999999999
Q ss_pred CCCCC-CC----h----HHHHHHHHH--HhcCCCeEEEEecc
Q 024143 151 PPSRS-LD----Y----PGDVRLAAL--SWNGEGSFLFTSSS 181 (272)
Q Consensus 151 ~~~~~-~~----~----~~~~~~l~~--~~~gvkr~V~~SS~ 181 (272)
+.... .. + ...+++++. .+.+++.+|+++|-
T Consensus 79 g~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN 120 (303)
T 1o6z_A 79 GIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN 120 (303)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 86432 11 1 122333331 34567888888754
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.08 E-value=4.1e-06 Score=74.16 Aligned_cols=70 Identities=20% Similarity=0.278 Sum_probs=57.4
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
...|++|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...++.......+++.++|+||.|.+.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~ 87 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN--GFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSD 87 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCC
Confidence 35678999999999999999999999 99999999999988887777765432222466789999988864
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=4.5e-06 Score=69.98 Aligned_cols=68 Identities=13% Similarity=0.168 Sum_probs=54.1
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
.+++|.|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+...++... +. +.++++|+||.+..+..
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~--~~~~~~~~~DvVi~av~~~~ 95 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGS--GFKVVVGSRNPKRTARLFPSAAQVT--FQEEAVSSPEVIFVAVFREH 95 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESSHHHHHHHSBTTSEEE--EHHHHTTSCSEEEECSCGGG
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCcee--cHHHHHhCCCEEEECCChHH
Confidence 357899999999999999999999 9999999999877766655565543 32 46789999999998643
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=1.8e-05 Score=70.24 Aligned_cols=94 Identities=13% Similarity=0.064 Sum_probs=58.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCC--eEEEEec--CCcchhh----hhh----C--CceeeccC---ccccCCCCEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTM--TADHHDE----LIN----M--GITPSLKW---TEATQKFPYV 146 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~--~V~~~~R--~~~~~~~----l~~----~--~i~~~~~d---~~~~~~~D~V 146 (272)
+||+|||+ |++|++++..|+.+ ++ ++..+++ .+++.+. +.. . .++....+ .++++++|+|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~--~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~V 78 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKE--PFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVV 78 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTC--TTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEE
T ss_pred CEEEEECCCChhHHHHHHHHHhC--CCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEE
Confidence 48999998 99999999999988 64 6777887 4432221 111 1 11222222 3578999999
Q ss_pred EEecCCCCC-CC----h----HHHHHHHH--HHhcCCCeEEEEecc
Q 024143 147 IFCAPPSRS-LD----Y----PGDVRLAA--LSWNGEGSFLFTSSS 181 (272)
Q Consensus 147 i~~a~~~~~-~~----~----~~~~~~l~--~~~~gvkr~V~~SS~ 181 (272)
||+|+.... .. + ...+++++ ..+.+ +++|+++|-
T Consensus 79 i~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN 123 (313)
T 1hye_A 79 IITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN 123 (313)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence 999986432 11 1 12223333 13446 778888774
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.03 E-value=5.5e-06 Score=69.67 Aligned_cols=69 Identities=14% Similarity=0.200 Sum_probs=54.7
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEE-EecCCcchhhhhh-CCceeeccCccccCCCCEEEEecCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYG-QTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~-~~R~~~~~~~l~~-~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
..|+||.|+|+|.+|+.+++.|.+. |++|++ .+|++++.+.+.. .++.....+.+.+.++|+||.+..+
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~--g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~ 91 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAA--QIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY 91 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHT--TCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh
Confidence 3468999999999999999999999 999999 8898888776543 3444433333567889999999864
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.1e-05 Score=71.07 Aligned_cols=67 Identities=16% Similarity=0.201 Sum_probs=56.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC-ccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW-TEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d-~~~~~~~D~Vi~~a~~ 152 (272)
++||.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...+......+ .++++++|+||.|.+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~ 74 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVN 74 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCC
Confidence 46899999999999999999999 9999999999988887777776552223 2567899999999875
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=98.01 E-value=3.8e-06 Score=73.34 Aligned_cols=67 Identities=13% Similarity=0.149 Sum_probs=55.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|+||.|+|+|.+|..+++.|.+. ||+|++.+|++++.+.+...++.......++.+++|+||.|.+.
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~ 67 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA--GFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLAD 67 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH--TCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSS
T ss_pred CCeEEEEccCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCC
Confidence 67999999999999999999999 99999999999988877766665432222456788999998875
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.9e-05 Score=69.90 Aligned_cols=33 Identities=15% Similarity=0.261 Sum_probs=29.3
Q ss_pred CCeEEEEcC---cHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 84 ~~~IlItGa---GfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
.+++||||+ |.||++++++|.++ |++|++++|+
T Consensus 9 ~k~~lVTGa~~s~GIG~aia~~la~~--G~~Vv~~~r~ 44 (319)
T 2ptg_A 9 GKTAFVAGVADSNGYGWAICKLLRAA--GARVLVGTWP 44 (319)
T ss_dssp TCEEEEECCCCTTSHHHHHHHHHHHT--TCEEEEEECH
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEEEecc
Confidence 467999984 89999999999999 9999999864
|
| >1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A | Back alignment and structure |
|---|
Probab=98.00 E-value=2.2e-07 Score=67.49 Aligned_cols=58 Identities=22% Similarity=0.162 Sum_probs=46.6
Q ss_pred cceeeecccCcccc-cccccccCCcchhhhcc-ccccccc--cccccceecccccccccccc
Q 024143 2 GTISCTNTVSLNGA-CTRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNF 59 (272)
Q Consensus 2 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 59 (272)
+.+|+.++..-.-. .++||++||+|++|-++ -.+++.+ ++|...+|..++...++..+
T Consensus 20 ~~i~~~vL~~~~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i 81 (91)
T 1dny_A 20 AEIWERVLGVSGIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYV 81 (91)
T ss_dssp HHHHHHHHTCSSCCSSCCTTSSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCCHHHcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHH
Confidence 56899988652111 28999999999999999 9999997 78888999999888776554
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.00 E-value=1.4e-05 Score=71.37 Aligned_cols=68 Identities=7% Similarity=0.028 Sum_probs=47.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCC-------eEEEEecC----Ccchh----hhhhC--Ccee--ec-cC-ccccCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMT----ADHHD----ELINM--GITP--SL-KW-TEATQK 142 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~-------~V~~~~R~----~~~~~----~l~~~--~i~~--~~-~d-~~~~~~ 142 (272)
+||+|||+ |++|++++..|..+ ++ +|+.+++. +++.. .+... .... .. .| .+++++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~--~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANG--DMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKD 83 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTT
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCC
Confidence 68999997 99999999999988 75 89999887 43232 12221 1111 11 22 247899
Q ss_pred CCEEEEecCCCC
Q 024143 143 FPYVIFCAPPSR 154 (272)
Q Consensus 143 ~D~Vi~~a~~~~ 154 (272)
+|+|||+|+...
T Consensus 84 aD~Vi~~ag~~~ 95 (329)
T 1b8p_A 84 ADVALLVGARPR 95 (329)
T ss_dssp CSEEEECCCCCC
T ss_pred CCEEEEeCCCCC
Confidence 999999998644
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=98.00 E-value=1e-05 Score=71.63 Aligned_cols=70 Identities=13% Similarity=0.159 Sum_probs=53.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecC--CcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMT--ADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~--~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
.|+||.|+|+|.+|..+++.|.+. |+ +|++.+|+ +++.+.+...++.......++++++|+||.|.++..
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~ 95 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQA--GAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQA 95 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHH--SCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTT
T ss_pred CCCEEEEECccHHHHHHHHHHHHC--CCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchh
Confidence 467999999999999999999999 99 99999997 466666666666543222246778999999988643
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.99 E-value=9.9e-06 Score=71.18 Aligned_cols=66 Identities=12% Similarity=0.076 Sum_probs=54.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
++||.|+|+|.+|..+++.|.+. ||+|++.+|++++.+.+...++.......++.+ +|+||.|.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~ 80 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW--PGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLD 80 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS--TTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCC
Confidence 36899999999999999999999 999999999999988887777654322124566 9999999874
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=97.99 E-value=8e-06 Score=76.14 Aligned_cols=68 Identities=19% Similarity=0.199 Sum_probs=51.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC--CceeeccCc-------cccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSLKWT-------EATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~--~i~~~~~d~-------~~~~~~D~Vi~~a~~~ 153 (272)
+++|+|+|+|++|+++++.|.+. |++|++.+|++++.+.+... ++.....|. +++.++|+||||++..
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~--G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTT--TCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--cCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 57899999999999999999998 99999999987766554321 233333332 2467899999999864
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.98 E-value=2.3e-05 Score=61.76 Aligned_cols=67 Identities=10% Similarity=0.081 Sum_probs=51.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC-cchhhhh---hCCceeeccCc-------c-ccCCCCEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELI---NMGITPSLKWT-------E-ATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~~~l~---~~~i~~~~~d~-------~-~~~~~D~Vi~~a~ 151 (272)
.++|+|+|+|.+|+.+++.|.+. |++|+++++++ ++.+.+. ..++..+.+|. + .+.++|+||.+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~--g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR--GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence 35899999999999999999999 99999999974 4333332 34677776663 1 2678999998876
Q ss_pred C
Q 024143 152 P 152 (272)
Q Consensus 152 ~ 152 (272)
.
T Consensus 81 ~ 81 (153)
T 1id1_A 81 N 81 (153)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=3.5e-05 Score=68.39 Aligned_cols=69 Identities=23% Similarity=0.469 Sum_probs=55.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhhhhhCCce-eeccCc-c-ccCCCCEEEEecCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGIT-PSLKWT-E-ATQKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~l~~~~i~-~~~~d~-~-~~~~~D~Vi~~a~~~ 153 (272)
.++||.|+|+|.+|+.+++.|.+. |+ +|++.+|++++.+.....|+. ....+. + ++.++|+||.|.++.
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~--G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~ 105 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR 105 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGG
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--CCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHH
Confidence 347999999999999999999999 99 999999998877766666652 122233 4 678999999998864
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.9e-05 Score=70.15 Aligned_cols=67 Identities=7% Similarity=0.032 Sum_probs=51.7
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCC-CeEEEEecCC-------cchhhhhhCCceeec-cCccccCCCCEEEEecCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTA-------DHHDELINMGITPSL-KWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g-~~V~~~~R~~-------~~~~~l~~~~i~~~~-~d~~~~~~~D~Vi~~a~~~ 153 (272)
++++|.|+|+|.+|..+++.|.+. | ++|++.+|++ +..+.+...++ .. ...++++++|+||.|.++.
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp~~ 98 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGR--NAARLAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVVGA 98 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT--TCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCCGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHc--CCCeEEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecCCH
Confidence 357899999999999999999999 9 9999999987 23333444565 22 2225678899999998764
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.94 E-value=1e-05 Score=71.91 Aligned_cols=68 Identities=16% Similarity=0.162 Sum_probs=56.5
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
.+++|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...++.......++++++|+||.|.+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~ 97 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLEN 97 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCC
Confidence 457999999999999999999999 99999999999888877766765543222567899999998874
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.93 E-value=2.7e-05 Score=63.07 Aligned_cols=69 Identities=19% Similarity=0.250 Sum_probs=54.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cc--cCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EA--TQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~--~~~~D~Vi~~a~~ 152 (272)
..++|+|+|+|.+|..+++.|.+.. |++|+++++++++.+.+...++..+.+|. ++ +.++|+||.+.+.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARY-GKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 3468999999999999999998731 68999999999888777767777665543 23 5689999988764
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.2e-05 Score=72.74 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=53.9
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccC---CCCEEEEecCCC
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQ---KFPYVIFCAPPS 153 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~---~~D~Vi~~a~~~ 153 (272)
...+++|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...++.......+++. .+|+||.|.+..
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~ 92 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA 92 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH
Confidence 34457999999999999999999999 999999999998888777666554321113333 449999998764
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.92 E-value=5.2e-05 Score=70.61 Aligned_cols=66 Identities=17% Similarity=0.235 Sum_probs=52.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCcee--------------------eccCc-cccCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP--------------------SLKWT-EATQKF 143 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~--------------------~~~d~-~~~~~~ 143 (272)
|||.|+|+|++|..++..|.+. |++|++++|++++.+.+.. +... ...|. ++++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~-g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNS-GTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA 79 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH-TCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHc-CCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence 6999999999999999999999 9999999999888776654 2111 11222 357789
Q ss_pred CEEEEecCCC
Q 024143 144 PYVIFCAPPS 153 (272)
Q Consensus 144 D~Vi~~a~~~ 153 (272)
|+||.|++..
T Consensus 80 DvViiaVptp 89 (450)
T 3gg2_A 80 DIIFIAVGTP 89 (450)
T ss_dssp SEEEECCCCC
T ss_pred CEEEEEcCCC
Confidence 9999999754
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.92 E-value=1.9e-05 Score=69.22 Aligned_cols=68 Identities=15% Similarity=0.211 Sum_probs=51.5
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec------------cCcccc---CCCCEEE
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL------------KWTEAT---QKFPYVI 147 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~------------~d~~~~---~~~D~Vi 147 (272)
+||||.|+|+|.+|+.++..|.+. |++|++++|++++.+.+...++.... .+.+.. +++|+||
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLII 79 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEE
T ss_pred CCCeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEE
Confidence 357999999999999999999999 99999999998877766655543321 111223 3899999
Q ss_pred EecCC
Q 024143 148 FCAPP 152 (272)
Q Consensus 148 ~~a~~ 152 (272)
.|..+
T Consensus 80 ~~v~~ 84 (316)
T 2ew2_A 80 ALTKA 84 (316)
T ss_dssp ECSCH
T ss_pred EEecc
Confidence 99875
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.91 E-value=2.2e-05 Score=65.61 Aligned_cols=66 Identities=14% Similarity=0.094 Sum_probs=53.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc---c-----ccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~---~-----~~~~~D~Vi~~a~~ 152 (272)
|+|+|+|+|.+|+++++.|.++ |++|+++++++++.+.+.. .+...+.+|. + .+.++|+||.+.+.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR--KYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence 5799999999999999999999 9999999999888776543 4677776664 1 26789999877654
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.2e-05 Score=70.13 Aligned_cols=66 Identities=17% Similarity=0.323 Sum_probs=54.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|||.|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+...++.......+++.++|+||.|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~ 67 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA--GCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLAD 67 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCC
Confidence 6899999999999999999999 99999999999988887776765432222456789999988873
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=1.2e-05 Score=71.10 Aligned_cols=68 Identities=19% Similarity=0.240 Sum_probs=58.3
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
.|+||-++|.|..|+.+++.|++. ||+|++.+|++++.+.+...|......-.++.+.+|+||-|.+.
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~--G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~ 69 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPA 69 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSC
T ss_pred CcCEEEEeeehHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCc
Confidence 478999999999999999999999 99999999999999888877776543323578899999999874
|
| >4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=1.5e-06 Score=84.09 Aligned_cols=62 Identities=18% Similarity=0.064 Sum_probs=0.0
Q ss_pred CcceeeecccCcccc-cccccccCCcchhhhcc-ccccc-cc--cccccceeccccccccccccccc
Q 024143 1 MGTISCTNTVSLNGA-CTRFFAADSLSSKASSV-FFNNR-TW--KLKLRPLVASSSSSSMATNFQVT 62 (272)
Q Consensus 1 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~ 62 (272)
+++||+.++..-.-. .++||++|||||+|-|| -.+|+ .+ +++++.+|+++|...++..+...
T Consensus 529 l~~iw~~vL~~~~~~~~d~Ff~lGGdSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~la~~l~~~ 595 (620)
T 4dg8_A 529 CAQLWSELLGCEVGAADQDFFLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSH 595 (620)
T ss_dssp -------------------------------------------------------------------
T ss_pred HHHHHHHHhCCCCCCCCCChhhccCcHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHHHHHHHHhc
Confidence 468999998752222 28999999999999999 99998 55 88999999999999998877543
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=97.89 E-value=2.1e-06 Score=76.32 Aligned_cols=59 Identities=15% Similarity=0.059 Sum_probs=47.5
Q ss_pred CcceeeecccCcc-cccccccccCCcchhhhcc-ccccccc--cccccceecccccccccccc
Q 024143 1 MGTISCTNTVSLN-GACTRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNF 59 (272)
Q Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 59 (272)
++.||+.++.--. ...++||++||||++|-|+ -++++.+ +++++.+|..+|...++..+
T Consensus 16 l~~~~~~~l~~~~i~~~~~ff~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~ 78 (329)
T 3tej_A 16 IAAAFSSLLGCDVQDADADFFALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATII 78 (329)
T ss_dssp HHHHHHHHHTC-CCSTTCBTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHH
Confidence 3578999886422 1229999999999999999 9999987 88899999999988877654
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.8e-05 Score=69.64 Aligned_cols=66 Identities=21% Similarity=0.209 Sum_probs=50.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
+||-++|.|.+|..+++.|++. ||+|++.+|++++.+.+...|........++.+.+|+||-|.+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~ 71 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA--GYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLAD 71 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSS
T ss_pred CcEEEEecHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccc
Confidence 5899999999999999999999 99999999999998888777776654334678899999999875
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.7e-05 Score=71.76 Aligned_cols=67 Identities=22% Similarity=0.297 Sum_probs=50.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC---c----cccCCCCEEEEecCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW---T----EATQKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d---~----~~~~~~D~Vi~~a~~~ 153 (272)
++|||+|+|+|++|+.+++.|.+ .++|.+.+|+.++.+.+.. .......| . +.++++|+||+|+++.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~---~~~v~~~~~~~~~~~~~~~-~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD---EFDVYIGDVNNENLEKVKE-FATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT---TSEEEEEESCHHHHHHHTT-TSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CccEEEEECCCHHHHHHHHHHhc---CCCeEEEEcCHHHHHHHhc-cCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 45799999999999999998854 5899999998877766543 23333333 2 2568999999999874
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.88 E-value=2.4e-05 Score=68.32 Aligned_cols=67 Identities=15% Similarity=0.258 Sum_probs=55.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCC---eEEEEecCCcchhhhhhC-CceeeccCccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC---QIYGQTMTADHHDELINM-GITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~---~V~~~~R~~~~~~~l~~~-~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
++||.|+|+|.+|+.+++.|.+. |+ +|++.+|++++.+.+... ++.......++++++|+||.+..+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~--g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p 73 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN--GYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP 73 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT--TCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG
T ss_pred CCEEEEEcccHHHHHHHHHHHHC--CCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH
Confidence 47899999999999999999999 88 999999999888777654 666543333577899999999965
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=3.3e-05 Score=71.60 Aligned_cols=67 Identities=15% Similarity=0.177 Sum_probs=51.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCce-------------------eeccCc-cccCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT-------------------PSLKWT-EATQKFP 144 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~-------------------~~~~d~-~~~~~~D 144 (272)
|||.|+|+|++|..++..|.+. |++|++++|++++.+.+...+.. ....+. +++.++|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD 78 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence 4899999999999999999999 99999999998887766542110 111222 2567899
Q ss_pred EEEEecCCC
Q 024143 145 YVIFCAPPS 153 (272)
Q Consensus 145 ~Vi~~a~~~ 153 (272)
+||.|.+..
T Consensus 79 vviiaVptp 87 (436)
T 1mv8_A 79 VSFICVGTP 87 (436)
T ss_dssp EEEECCCCC
T ss_pred EEEEEcCCC
Confidence 999999753
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.86 E-value=1.2e-05 Score=73.83 Aligned_cols=68 Identities=19% Similarity=0.163 Sum_probs=50.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCC---CeEEEEecCCcchhhhhhC-------CceeeccCc-------cccCC--CC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPG---CQIYGQTMTADHHDELINM-------GITPSLKWT-------EATQK--FP 144 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g---~~V~~~~R~~~~~~~l~~~-------~i~~~~~d~-------~~~~~--~D 144 (272)
|++|+|+|+|++|+.+++.|.+. | .+|++.+|++++.+.+... .+.....|. +.+++ +|
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~--g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~D 78 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN--REVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQ 78 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC--TTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCC
Confidence 67999999999999999999998 6 3899999998776554321 244444442 13444 89
Q ss_pred EEEEecCCC
Q 024143 145 YVIFCAPPS 153 (272)
Q Consensus 145 ~Vi~~a~~~ 153 (272)
+||||+++.
T Consensus 79 vVin~ag~~ 87 (405)
T 4ina_A 79 IVLNIALPY 87 (405)
T ss_dssp EEEECSCGG
T ss_pred EEEECCCcc
Confidence 999999863
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.84 E-value=2.7e-05 Score=67.86 Aligned_cols=67 Identities=16% Similarity=0.311 Sum_probs=53.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|++|.|+|+ |.+|+.+++.|.+. |++|++.+|++++.+.+...++... ...+.+.++|+||.|.++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~aDvVi~av~~~ 78 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGMGIPLT-DGDGWIDEADVVVLALPDN 78 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHTTCCCC-CSSGGGGTCSEEEECSCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhcCCCcC-CHHHHhcCCCEEEEcCCch
Confidence 579999999 99999999999999 9999999999877766655554332 1224677999999998763
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.83 E-value=5.5e-05 Score=65.57 Aligned_cols=68 Identities=24% Similarity=0.490 Sum_probs=53.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhhhhhCCcee-eccCc-cccC-CCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITP-SLKWT-EATQ-KFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~l~~~~i~~-~~~d~-~~~~-~~D~Vi~~a~~~ 153 (272)
|++|.|+|+|.+|+.+++.|.+. |+ +|++.+|++++.+.+...++.. ...+. +.+. ++|+||.|.++.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~--g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~ 73 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR 73 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH
T ss_pred CcEEEEEecCHHHHHHHHHHHhc--CCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH
Confidence 57999999999999999999999 98 9999999887776665556532 12233 4677 899999998764
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00014 Score=64.58 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=29.0
Q ss_pred CCeEEEEcCc---HHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 84 ENDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 84 ~~~IlItGaG---fiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
.++++|||+| -||.+++++|.++ |++|++..|++
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~--G~~Vv~~~~~~ 38 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKR--NVKIIFGIWPP 38 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEECHH
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEecCc
Confidence 3679999973 7999999999999 99999777553
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.2e-05 Score=71.09 Aligned_cols=68 Identities=19% Similarity=0.233 Sum_probs=55.0
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
.+++|.|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+...++.......++++++|+||.|.+.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~ 75 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ--GKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLD 75 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCC
Confidence 457899999999999999999999 99999999999888777666664432222456789999988874
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=97.80 E-value=4.9e-05 Score=71.28 Aligned_cols=71 Identities=11% Similarity=0.067 Sum_probs=53.5
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCc----chhhhhhCC---------------------ceeecc
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTAD----HHDELINMG---------------------ITPSLK 135 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~----~~~~l~~~~---------------------i~~~~~ 135 (272)
..+|||.|+|+|++|..++..|.+. +|| +|++++|+++ +.+.+.... --....
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~-~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~tt 94 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADA-PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTP 94 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHS-TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEES
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHh-CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeC
Confidence 3467999999999999999999887 489 9999999998 766654311 011112
Q ss_pred CccccCCCCEEEEecCCC
Q 024143 136 WTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 136 d~~~~~~~D~Vi~~a~~~ 153 (272)
|.+++.++|+||.|++..
T Consensus 95 d~ea~~~aDvViiaVptp 112 (478)
T 3g79_A 95 DFSRISELDAVTLAIQTP 112 (478)
T ss_dssp CGGGGGGCSEEEECCCCC
T ss_pred cHHHHhcCCEEEEecCCc
Confidence 335678999999999754
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=97.79 E-value=1.7e-05 Score=67.72 Aligned_cols=67 Identities=15% Similarity=0.255 Sum_probs=53.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCC----eEEEEecCCcchhhhhh-CCceeeccCccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC----QIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~----~V~~~~R~~~~~~~l~~-~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|+||.|+|+|.+|+.+++.|.+. |+ +|++.+|++++.+.+.. .++.......++++++|+||.|..+
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~--g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~ 73 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINK--NIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKP 73 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCT
T ss_pred CCeEEEECccHHHHHHHHHHHhC--CCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCH
Confidence 47899999999999999999999 98 99999999888776643 3655432222456789999999954
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=3.7e-05 Score=67.16 Aligned_cols=69 Identities=13% Similarity=0.142 Sum_probs=50.7
Q ss_pred CCCeEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccC---c----cccCCCCEEEEe
Q 024143 83 GENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKW---T----EATQKFPYVIFC 149 (272)
Q Consensus 83 ~~~~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d---~----~~~~~~D~Vi~~ 149 (272)
..++++||| +|.+|+++++.|.++ |++|++++|++++.+.+.. .++.....| . +.++++|+|||+
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~--G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ 195 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGE--GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA 195 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence 447899999 699999999999999 9999999998766544321 122222222 2 246789999999
Q ss_pred cCCC
Q 024143 150 APPS 153 (272)
Q Consensus 150 a~~~ 153 (272)
++..
T Consensus 196 ag~g 199 (287)
T 1lu9_A 196 GAIG 199 (287)
T ss_dssp CCTT
T ss_pred CCcc
Confidence 9854
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.77 E-value=3.9e-05 Score=65.98 Aligned_cols=68 Identities=16% Similarity=0.208 Sum_probs=53.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCe-EEEEecCCcchhhhhhC-CceeeccCccccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELINM-GITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~-V~~~~R~~~~~~~l~~~-~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
+++|.|+|+|.+|+.+++.|.+. |++ |.+.+|++++.+.+... ++.......+.+.++|+||.+.++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~ 79 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS 79 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH
Confidence 46899999999999999999999 998 88999988777665443 5554322224667899999998764
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=1.2e-05 Score=66.62 Aligned_cols=64 Identities=17% Similarity=0.183 Sum_probs=48.8
Q ss_pred CeEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-C-------ceeeccCc-cccCCCCEEEEecCC
Q 024143 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-G-------ITPSLKWT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~-------i~~~~~d~-~~~~~~D~Vi~~a~~ 152 (272)
|||+|+| +|.+|+.+++.|.+. |++|++++|++++.+.+... + +. ..+. ++++++|+||++.++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~Vi~~~~~ 74 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAKAAEYRRIAGDASIT--GMKNEDAAEACDIAVLTIPW 74 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHHHHHHHHHHSSCCEE--EEEHHHHHHHCSEEEECSCH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhccccccCCCC--hhhHHHHHhcCCEEEEeCCh
Confidence 4799999 799999999999999 99999999987766544321 1 22 1121 356789999999875
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00026 Score=68.33 Aligned_cols=132 Identities=14% Similarity=0.089 Sum_probs=80.6
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-c-hhhhhhCCc--eeeccCc-c-----------ccCCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-H-HDELINMGI--TPSLKWT-E-----------ATQKFP 144 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-~-~~~l~~~~i--~~~~~d~-~-----------~~~~~D 144 (272)
+..+.++|||+ +-||+.++++|.++ |++|++.+|... . .+.+...+. .....|. + .+..+|
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~--Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iD 397 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKY--GAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTID 397 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCC
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHC--CCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCC
Confidence 34467999997 89999999999999 999999886421 1 123332232 2233343 1 245799
Q ss_pred EEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
++||+|+..... + +...+ +.++ +...+-.++|++||..-+-.. | ..
T Consensus 398 iLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~------------~-~~ 464 (604)
T 2et6_A 398 ILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN------------F-GQ 464 (604)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC------------T-TB
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC------------C-CC
Confidence 999999964321 1 11111 1111 123455799999997532111 1 11
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeC
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLA 228 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~ 228 (272)
..|+.+|...+.+.+.. + +..+.|+
T Consensus 465 ~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG 498 (604)
T 2et6_A 465 ANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH 498 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred hhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCC
Confidence 57999999887765542 3 4667887
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=3.6e-05 Score=68.37 Aligned_cols=69 Identities=19% Similarity=0.278 Sum_probs=53.1
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCC----CeEEEEecCCc--chhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTAD--HHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g----~~V~~~~R~~~--~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
..+|+|.|+|+|.+|..++..|.+. | ++|++.+|+++ +.+.+...|+.......++..++|+||.|..+
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~--G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~~ 94 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAA--GVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKP 94 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHT--TSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC--CCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeCH
Confidence 4457899999999999999999999 8 89999999876 66666555665432222456789999999874
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.75 E-value=1.8e-05 Score=69.24 Aligned_cols=65 Identities=12% Similarity=0.267 Sum_probs=52.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~ 152 (272)
|+|.|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+...++... .+. +.+.++|+||.|.+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~D~vi~~v~~ 71 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAAGAETA-STAKAIAEQCDVIITMLPN 71 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEEC-SSHHHHHHHCSEEEECCSS
T ss_pred ceEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHCCCeec-CCHHHHHhCCCEEEEECCC
Confidence 5899999999999999999999 9999999999888777666665543 222 456689999999874
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00017 Score=69.66 Aligned_cols=131 Identities=15% Similarity=0.114 Sum_probs=78.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC---------cchhh----hhhCCce--eeccCc---------
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA---------DHHDE----LINMGIT--PSLKWT--------- 137 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~---------~~~~~----l~~~~i~--~~~~d~--------- 137 (272)
..+.++|||+ +-||+.++++|.++ |++|++.+|+. +..+. +...+.. ....|.
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~--Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~ 84 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKL--GAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVET 84 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHH
Confidence 3467999997 88999999999999 99999988754 33222 2222322 222222
Q ss_pred --cccCCCCEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCC
Q 024143 138 --EATQKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDE 194 (272)
Q Consensus 138 --~~~~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E 194 (272)
+.+..+|++||+|+..... + |...+ +.++ +...+-.++|++||..-+-..
T Consensus 85 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~------- 157 (604)
T 2et6_A 85 AVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN------- 157 (604)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-------
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC-------
Confidence 1245799999999964321 1 11111 1111 123455799999997542211
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeC
Q 024143 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLA 228 (272)
Q Consensus 195 ~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~ 228 (272)
| ....|+.+|...+.+.+.. + +..+.|+
T Consensus 158 -----~-~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 158 -----F-GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp -----T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred -----C-CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 1 1157999999888766543 3 4567885
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00024 Score=63.31 Aligned_cols=69 Identities=17% Similarity=0.219 Sum_probs=52.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhh----hhhC------CceeeccCccccCCCCEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM------GITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~----l~~~------~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
++||.|+|+|.+|+.++..|... |+ +|+.+++++++.+. +... .+.....+.++++++|+||.+++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~--~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ--GITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAG 82 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecc
Confidence 46899999999999999999999 76 99999998766543 3221 23333344568899999999998
Q ss_pred CCC
Q 024143 152 PSR 154 (272)
Q Consensus 152 ~~~ 154 (272)
...
T Consensus 83 ~p~ 85 (326)
T 3pqe_A 83 ANQ 85 (326)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
|
| >1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=5.5e-05 Score=64.78 Aligned_cols=65 Identities=22% Similarity=0.327 Sum_probs=52.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhhC-CceeeccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINM-GITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~~-~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|||.|+|+|.+|+.+++.|.+. | ++|++.+|++++.+.+... ++.......+.+ ++|+||.|.++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~~ 67 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ--GGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVKP 67 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeCc
Confidence 4799999999999999999999 9 9999999998887766543 665432222456 89999998873
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=97.73 E-value=2e-05 Score=67.47 Aligned_cols=66 Identities=12% Similarity=0.197 Sum_probs=52.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-CceeeccCc-cccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i~~~~~d~-~~~~~~D~Vi~~a~~ 152 (272)
|++|.|+|+|.+|+.+++.|.+. |++|.+.+|++++.+.+... ++... .+. +.+.++|+||.|.++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~D~Vi~~v~~ 70 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT--PHELIISGSSLERSKEIAEQLALPYA-MSHQDLIDQVDLVILGIKP 70 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS--SCEEEEECSSHHHHHHHHHHHTCCBC-SSHHHHHHTCSEEEECSCG
T ss_pred ccEEEEECCCHHHHHHHHHHHhC--CCeEEEECCCHHHHHHHHHHcCCEee-CCHHHHHhcCCEEEEEeCc
Confidence 57999999999999999999999 99999999998777665432 54432 222 456689999999874
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.71 E-value=4.3e-05 Score=67.40 Aligned_cols=66 Identities=17% Similarity=0.234 Sum_probs=52.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
+++|.|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+...++.......+.+.++|+||.|.+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKM--GHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVS 95 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCS
T ss_pred CCeEEEEcccHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCC
Confidence 36899999999999999999999 9999999999888777766665432211245668899998887
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=97.70 E-value=2.4e-05 Score=68.46 Aligned_cols=67 Identities=13% Similarity=0.252 Sum_probs=53.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
+++|.|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+...++.......+.+.++|+||.|.+.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~ 70 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE--GVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPN 70 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCC
Confidence 46899999999999999999999 99999999998877776655655332112456679999998864
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00012 Score=67.94 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=54.8
Q ss_pred CCCcCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceee--------------------ccCc-
Q 024143 79 SGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS--------------------LKWT- 137 (272)
Q Consensus 79 ~~~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~--------------------~~d~- 137 (272)
|+...|.+|.|+|.||+|..++..|.+. ||+|++++.++++.+.+.+ |..++ ..|.
T Consensus 16 p~~~~m~~IaViGlGYVGLp~A~~~A~~--G~~V~g~Did~~kV~~ln~-G~~pi~Epgl~ell~~~~~~g~l~~tt~~~ 92 (444)
T 3vtf_A 16 PRGSHMASLSVLGLGYVGVVHAVGFALL--GHRVVGYDVNPSIVERLRA-GRPHIYEPGLEEALGRALSSGRLSFAESAE 92 (444)
T ss_dssp CTTCCCCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHT-TCCSSCCTTHHHHHHHHHHTTCEEECSSHH
T ss_pred CCCCCCCEEEEEccCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHC-CCCCCCCCCHHHHHHHHHHcCCeeEEcCHH
Confidence 4445788999999999999999999999 9999999999888877753 21111 1121
Q ss_pred cccCCCCEEEEecCC
Q 024143 138 EATQKFPYVIFCAPP 152 (272)
Q Consensus 138 ~~~~~~D~Vi~~a~~ 152 (272)
+++..+|++|.|.+.
T Consensus 93 ~ai~~ad~~~I~VpT 107 (444)
T 3vtf_A 93 EAVAATDATFIAVGT 107 (444)
T ss_dssp HHHHTSSEEEECCCC
T ss_pred HHHhcCCceEEEecC
Confidence 246789999999974
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.69 E-value=2.9e-05 Score=72.63 Aligned_cols=71 Identities=14% Similarity=0.111 Sum_probs=52.3
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-CceeeccC---c----cccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKW---T----EATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i~~~~~d---~----~~~~~~D~Vi~~a~~~ 153 (272)
..+++|+|+|+|.+|+.+++.|.+. ++++|++.+|++++.+.+... ++.....| . +++.++|+||+|++..
T Consensus 21 l~~k~VlIiGAGgiG~aia~~L~~~-~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~ 99 (467)
T 2axq_A 21 HMGKNVLLLGSGFVAQPVIDTLAAN-DDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYT 99 (467)
T ss_dssp --CEEEEEECCSTTHHHHHHHHHTS-TTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGG
T ss_pred CCCCEEEEECChHHHHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchh
Confidence 3467899999999999999999986 257999999998776665432 44433333 1 2456899999999864
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00037 Score=62.07 Aligned_cols=73 Identities=14% Similarity=0.168 Sum_probs=52.8
Q ss_pred CCCcCCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhh----hhh------CCceee-ccCccccCCCCEE
Q 024143 79 SGGVGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDE----LIN------MGITPS-LKWTEATQKFPYV 146 (272)
Q Consensus 79 ~~~~~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~----l~~------~~i~~~-~~d~~~~~~~D~V 146 (272)
|.++.++||.|+|+|.+|..++..|... |+ +|+.+++++++.+. +.. ...... ..|.++++++|+|
T Consensus 2 ~~~m~~~kI~viGaG~vG~~~a~~l~~~--~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~~a~~~aDiV 79 (324)
T 3gvi_A 2 PGSMARNKIALIGSGMIGGTLAHLAGLK--ELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAAIEGADVV 79 (324)
T ss_dssp ----CCCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSGGGGTTCSEE
T ss_pred CCCCcCCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCHHHHCCCCEE
Confidence 3445678999999999999999999999 88 99999998876531 211 122222 2455789999999
Q ss_pred EEecCCC
Q 024143 147 IFCAPPS 153 (272)
Q Consensus 147 i~~a~~~ 153 (272)
|.+++..
T Consensus 80 Iiaag~p 86 (324)
T 3gvi_A 80 IVTAGVP 86 (324)
T ss_dssp EECCSCC
T ss_pred EEccCcC
Confidence 9999854
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00021 Score=66.49 Aligned_cols=67 Identities=12% Similarity=0.114 Sum_probs=52.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCC-------ce------------eeccCc-cccCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG-------IT------------PSLKWT-EATQKFP 144 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~-------i~------------~~~~d~-~~~~~~D 144 (272)
-+|.|+|+|++|..++..|.+. ||+|++++|++++.+.+.... ++ ....|. ++++++|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred eEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 5899999999999999999999 999999999999888775421 00 111233 4678999
Q ss_pred EEEEecCCC
Q 024143 145 YVIFCAPPS 153 (272)
Q Consensus 145 ~Vi~~a~~~ 153 (272)
+||.|.+..
T Consensus 87 vvii~Vptp 95 (446)
T 4a7p_A 87 AVFIAVGTP 95 (446)
T ss_dssp EEEECCCCC
T ss_pred EEEEEcCCC
Confidence 999998643
|
| >3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A | Back alignment and structure |
|---|
Probab=97.67 E-value=8.5e-05 Score=64.62 Aligned_cols=70 Identities=21% Similarity=0.316 Sum_probs=53.1
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCce-eeccCc-cccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT-PSLKWT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~-~~~~d~-~~~~~~D~Vi~~a~~ 152 (272)
.|++|.|+|+|.+|+.+++.|.+...+++|++.+|++++.+.+...++. ....+. +.+.++|+||.|.++
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~ 76 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPI 76 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCH
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCH
Confidence 4679999999999999999999873357999999988777666555542 122232 456789999999875
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.67 E-value=9.9e-05 Score=63.78 Aligned_cols=66 Identities=17% Similarity=0.297 Sum_probs=52.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCcee-eccCc-cccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-SLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~-~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
|+|.|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+...++.. ...+. +. .++|+||.|.++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~ 68 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQ 68 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHH
Confidence 4799999999999999999999 999999999988777665555531 12233 35 8899999998753
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=3e-05 Score=67.59 Aligned_cols=66 Identities=17% Similarity=0.197 Sum_probs=52.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|+|.|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+...++.......+++.++|+||.|.+.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~ 66 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH--GYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPT 66 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT--TCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSS
T ss_pred CeEEEEeccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCC
Confidence 4799999999999999999999 99999999998887777666655432112446678999888753
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.65 E-value=3.2e-05 Score=67.33 Aligned_cols=66 Identities=21% Similarity=0.283 Sum_probs=50.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|++|.|+|+|.+|+.+++.|.+. |++|++.+ ++++.+.+...++.......+.+.++|+||.|.+.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~ 68 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA--GHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPD 68 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT--TCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC--CCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCC
Confidence 57999999999999999999999 99999988 87777776655554321111356689999988854
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.63 E-value=4.3e-05 Score=65.16 Aligned_cols=71 Identities=11% Similarity=0.151 Sum_probs=50.8
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcc--------------hhhhhh-CCceeeccCccccCCCCEE
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH--------------HDELIN-MGITPSLKWTEATQKFPYV 146 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~--------------~~~l~~-~~i~~~~~d~~~~~~~D~V 146 (272)
..++||.|+|+|.+|+.+++.|.+. |++|++.+|++++ ...+.. .+........++++++|+|
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvV 94 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADL--GHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAELV 94 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCEE
Confidence 4568999999999999999999999 9999999998775 222221 1221111112466789999
Q ss_pred EEecCCCC
Q 024143 147 IFCAPPSR 154 (272)
Q Consensus 147 i~~a~~~~ 154 (272)
|.|.++..
T Consensus 95 ilavp~~~ 102 (245)
T 3dtt_A 95 VNATEGAS 102 (245)
T ss_dssp EECSCGGG
T ss_pred EEccCcHH
Confidence 99998753
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.60 E-value=4.1e-05 Score=59.66 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=52.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccC-c-cccCCCCEEEEecCCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKW-T-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d-~-~~~~~~D~Vi~~a~~~~ 154 (272)
.++|+|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+.. .+......+ . +.+.++|+||.+.+...
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~--g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~ 92 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP--QYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKT 92 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT--TCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCC
Confidence 46899999999999999999998 9999999999877665432 343332222 2 35678999999987653
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00045 Score=73.72 Aligned_cols=133 Identities=11% Similarity=-0.008 Sum_probs=81.1
Q ss_pred CCCeEEEEcC-cH-HHHHHHHHHHhcCCCCeEEEE-ecCCcchhh----hhh----CC--ceeeccCc---c--------
Q 024143 83 GENDLLIVGP-GV-LGRLVAEQWRQEHPGCQIYGQ-TMTADHHDE----LIN----MG--ITPSLKWT---E-------- 138 (272)
Q Consensus 83 ~~~~IlItGa-Gf-iG~~l~~~L~~~~~g~~V~~~-~R~~~~~~~----l~~----~~--i~~~~~d~---~-------- 138 (272)
..+++||||+ |. ||+++++.|.++ |++|+++ .|+.++... +.. .+ +..+.+|. +
T Consensus 674 ~gKvaLVTGASsGgIG~aIA~~La~~--GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~ 751 (1887)
T 2uv8_A 674 KDKYVLITGAGKGSIGAEVLQGLLQG--GAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 751 (1887)
T ss_dssp TTCEEEEESCCSSSHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence 4468999996 77 999999999999 9999998 466554322 211 12 33344442 1
Q ss_pred ---c-----cC-CCCEEEEecCCCCCC-C---h---HHHHHH-----H------HH-H--hc-----CCCeEEEEeccee
Q 024143 139 ---A-----TQ-KFPYVIFCAPPSRSL-D---Y---PGDVRL-----A------AL-S--WN-----GEGSFLFTSSSAI 183 (272)
Q Consensus 139 ---~-----~~-~~D~Vi~~a~~~~~~-~---~---~~~~~~-----l------~~-~--~~-----gvkr~V~~SS~~v 183 (272)
. +. .+|++||+|+..... . . .+.... + .. . .. +..+||++||...
T Consensus 752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag 831 (1887)
T 2uv8_A 752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 831 (1887)
T ss_dssp HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence 1 12 589999999964322 1 1 111111 1 11 1 11 1258999999753
Q ss_pred ecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH-HHH----cC----eeEEeeCceec
Q 024143 184 YDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKV-ILE----FG----GCVLRLAGLYK 232 (272)
Q Consensus 184 Yg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~-l~~----~~----~~IlRp~~iyG 232 (272)
+.. . ...|+.+|...+.+ .+. ++ +..+.||++.+
T Consensus 832 ~~g-------------g--~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 832 TFG-------------G--DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp CSS-------------C--BTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred ccC-------------C--CchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 211 1 15799999998887 222 22 56789999874
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=97.60 E-value=8.6e-05 Score=69.41 Aligned_cols=68 Identities=9% Similarity=0.080 Sum_probs=50.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-------------------CceeeccCc-cccCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------------------GITPSLKWT-EATQKF 143 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-------------------~i~~~~~d~-~~~~~~ 143 (272)
||||.|+|+|++|..++..|.+..+|++|++++|++++.+.+... ++.. ..+. +++.++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~~~a 83 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAIKEA 83 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHHHC
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHHhcC
Confidence 579999999999999999999884468999999998777665321 1111 1222 356789
Q ss_pred CEEEEecCC
Q 024143 144 PYVIFCAPP 152 (272)
Q Consensus 144 D~Vi~~a~~ 152 (272)
|+||.|.+.
T Consensus 84 DvViiaVpt 92 (467)
T 2q3e_A 84 DLVFISVNT 92 (467)
T ss_dssp SEEEECCCC
T ss_pred CEEEEEcCC
Confidence 999999864
|
| >3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00012 Score=64.58 Aligned_cols=66 Identities=17% Similarity=0.131 Sum_probs=51.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC----------ccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW----------TEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d----------~~~~~~~D~Vi~~a~~ 152 (272)
+|||+|+|+|-+|..++..|. . |++|+.++|++++.+.+...|+.....+ .+....+|+||.+..+
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~--g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~ 77 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L--YHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQ 77 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCG
T ss_pred CCEEEEECCCHHHHHHHHHHh-c--CCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCH
Confidence 479999999999999999999 8 9999999999877666665565443111 1245678999998865
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00017 Score=63.65 Aligned_cols=69 Identities=14% Similarity=-0.025 Sum_probs=52.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCC--CeEEEEecCCcchhhhhh----------CCceeeccCccccCCCCEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELIN----------MGITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g--~~V~~~~R~~~~~~~l~~----------~~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
|+||.|+|+|.+|..++..|.+. | ++|+.++|++++.+.+.. ..+.....|.++++++|+||.+++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~--g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~aDvViiav~ 78 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ--GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLG 78 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCHHHhCCCCEEEEecC
Confidence 57999999999999999999999 8 899999998766544321 012322345567889999999998
Q ss_pred CCC
Q 024143 152 PSR 154 (272)
Q Consensus 152 ~~~ 154 (272)
...
T Consensus 79 ~~~ 81 (309)
T 1hyh_A 79 NIK 81 (309)
T ss_dssp CGG
T ss_pred Ccc
Confidence 643
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00012 Score=67.34 Aligned_cols=67 Identities=16% Similarity=0.221 Sum_probs=57.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----ccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----~~~~~D~Vi~~a~~ 152 (272)
.++|+|+|+|.+|+.+++.|.+. |++|+++++++++.+.+...++..+.+|. + -+.++|+||.+.+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~ 78 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD 78 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCC
Confidence 36899999999999999999999 99999999999998888878888887774 1 25689999888763
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=6.7e-05 Score=65.04 Aligned_cols=65 Identities=12% Similarity=0.089 Sum_probs=50.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|++|.|+|+|.+|+.+++.|.+ |++|++.+|++++.+.+...++.... ..+.+.++|+||.|.+.
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~---g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~ 65 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR---RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPT 65 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT---TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSS
T ss_pred CCeEEEEcccHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCC
Confidence 5789999999999999999875 78999999998877666544544433 33456789999998874
|
| >2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00021 Score=67.00 Aligned_cols=70 Identities=11% Similarity=0.077 Sum_probs=52.0
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCce------------------eeccCc-cccCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT------------------PSLKWT-EATQKF 143 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~------------------~~~~d~-~~~~~~ 143 (272)
+||||.|+|+|++|..++..|.+..+|++|++++|++++.+.+...... ....|. +++.++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~a 87 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEA 87 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcC
Confidence 3579999999999999999999884468999999998887766532110 011222 346689
Q ss_pred CEEEEecCC
Q 024143 144 PYVIFCAPP 152 (272)
Q Consensus 144 D~Vi~~a~~ 152 (272)
|+||.|++.
T Consensus 88 Dvvii~Vpt 96 (481)
T 2o3j_A 88 DLIFISVNT 96 (481)
T ss_dssp SEEEECCCC
T ss_pred CEEEEecCC
Confidence 999999864
|
| >3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00038 Score=61.60 Aligned_cols=68 Identities=13% Similarity=0.247 Sum_probs=49.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec--------------cCccc-cCCCCEEEE
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--------------KWTEA-TQKFPYVIF 148 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~--------------~d~~~-~~~~D~Vi~ 148 (272)
+|||+|+|+|-+|..++..|.+. |++|+.++|++ .+.+...|+.... .+.+. .+.+|+||.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVil 77 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKT--GHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLL 77 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHT--TCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEE
Confidence 47999999999999999999999 99999999976 2445444432211 12223 348999999
Q ss_pred ecCCCCC
Q 024143 149 CAPPSRS 155 (272)
Q Consensus 149 ~a~~~~~ 155 (272)
+..+...
T Consensus 78 avK~~~~ 84 (320)
T 3i83_A 78 CIKVVEG 84 (320)
T ss_dssp CCCCCTT
T ss_pred ecCCCCh
Confidence 9987553
|
| >1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00013 Score=65.06 Aligned_cols=67 Identities=15% Similarity=0.191 Sum_probs=51.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCce----------eeccCccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT----------PSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~----------~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
.+||.|+|+|.+|+.++..|.+. |++|++.+|++++.+.+...+.. ....+.+...++|+||.|..+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~--G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~aDvVil~vk~ 90 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN--GEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEEIKKEDILVIAIPV 90 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGGCCTTEEEEECSCG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHHhcCCCEEEEECCH
Confidence 47999999999999999999999 99999999998877766654421 111232226788999998875
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00094 Score=58.95 Aligned_cols=69 Identities=12% Similarity=0.133 Sum_probs=50.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhh----hh------CCceeec-cCccccCCCCEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL----IN------MGITPSL-KWTEATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l----~~------~~i~~~~-~d~~~~~~~D~Vi~~a~ 151 (272)
|+||.|+|+|.+|..++..|... |+ +|+.+++++++.+.. .. ....... .|.++++++|+||.+++
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~--g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~~aD~Vi~a~g 79 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAK--ELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSG 79 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCHHHHCCCCEEEEcCC
Confidence 46999999999999999999998 87 899999887655331 11 0112221 35567899999999997
Q ss_pred CCC
Q 024143 152 PSR 154 (272)
Q Consensus 152 ~~~ 154 (272)
...
T Consensus 80 ~p~ 82 (309)
T 1ur5_A 80 APR 82 (309)
T ss_dssp C--
T ss_pred CCC
Confidence 543
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00011 Score=63.93 Aligned_cols=67 Identities=25% Similarity=0.282 Sum_probs=51.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-------------C------------ceeeccCc-
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------------G------------ITPSLKWT- 137 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-------------~------------i~~~~~d~- 137 (272)
++||.|+|+|.+|+.+++.|.+. |++|++.+|++++.+..... + +.. ..+.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 57899999999999999999999 99999999998765543321 1 111 1232
Q ss_pred cccCCCCEEEEecCCC
Q 024143 138 EATQKFPYVIFCAPPS 153 (272)
Q Consensus 138 ~~~~~~D~Vi~~a~~~ 153 (272)
+++.++|+||.+++..
T Consensus 81 ~~~~~aDlVi~av~~~ 96 (283)
T 4e12_A 81 QAVKDADLVIEAVPES 96 (283)
T ss_dssp HHTTTCSEEEECCCSC
T ss_pred HHhccCCEEEEeccCc
Confidence 3578999999998764
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00061 Score=60.71 Aligned_cols=69 Identities=16% Similarity=0.127 Sum_probs=52.0
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhh----hhh-----CCceeeccCccccCCCCEEEEecC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN-----MGITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~----l~~-----~~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
.++||.|+|+|.+|+.++..|... +. +|+.+++++++.+. +.. ..+.....+.++++++|+||++++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAG 85 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCC
Confidence 457999999999999999999998 76 89999998765442 221 122333344568999999999998
Q ss_pred CC
Q 024143 152 PS 153 (272)
Q Consensus 152 ~~ 153 (272)
..
T Consensus 86 ~~ 87 (326)
T 3vku_A 86 AP 87 (326)
T ss_dssp CC
T ss_pred CC
Confidence 54
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00011 Score=62.01 Aligned_cols=64 Identities=11% Similarity=-0.082 Sum_probs=53.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----ccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----~~~~~D~Vi~~a~~ 152 (272)
++|+|+|+|.+|+.+++.|.+. |+ |+++++++++.+.+. .++..+.+|. + .+.++|.||.+.+.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~--g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS--EV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLES 81 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS--EE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSC
T ss_pred CEEEEECCChHHHHHHHHHHhC--Ce-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCC
Confidence 6899999999999999999999 99 999999988877666 6777777664 1 26789999887653
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0011 Score=58.85 Aligned_cols=70 Identities=14% Similarity=0.132 Sum_probs=52.5
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhh----hhhC------Cceee-ccCccccCCCCEEEEec
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDE----LINM------GITPS-LKWTEATQKFPYVIFCA 150 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~----l~~~------~i~~~-~~d~~~~~~~D~Vi~~a 150 (272)
.++||.|+|+|.+|..++..|... +. +|+.+++++++.+. +... ..... ..|.++++++|+||.++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~--~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~a 81 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIK--QLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTA 81 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcC
Confidence 457999999999999999999998 77 99999998876532 2211 22222 23557899999999999
Q ss_pred CCCC
Q 024143 151 PPSR 154 (272)
Q Consensus 151 ~~~~ 154 (272)
+...
T Consensus 82 g~p~ 85 (321)
T 3p7m_A 82 GVPR 85 (321)
T ss_dssp SCCC
T ss_pred CcCC
Confidence 8543
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00012 Score=65.35 Aligned_cols=67 Identities=15% Similarity=0.184 Sum_probs=51.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-Ccee-------------eccCc-cccCCCCEEEE
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITP-------------SLKWT-EATQKFPYVIF 148 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i~~-------------~~~d~-~~~~~~D~Vi~ 148 (272)
++||.|+|+|.+|+.++..|.+. |++|++++|++++.+.+... ++.. ...+. +++.++|+||.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~ 81 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 81 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEE
Confidence 46899999999999999999999 99999999988777666543 3211 11222 34678999999
Q ss_pred ecCC
Q 024143 149 CAPP 152 (272)
Q Consensus 149 ~a~~ 152 (272)
|.+.
T Consensus 82 ~v~~ 85 (359)
T 1bg6_A 82 VVPA 85 (359)
T ss_dssp CSCG
T ss_pred eCCc
Confidence 9875
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00027 Score=62.03 Aligned_cols=70 Identities=17% Similarity=0.289 Sum_probs=54.7
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeecc-Cc-cccCCCCEEEEecCC
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK-WT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~-d~-~~~~~~D~Vi~~a~~ 152 (272)
....++|+|+|+|-+|+.+++.|... |++|++.+|++++...+...+++.... +. +.+.++|+||.+.+.
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~ 225 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAAL--GANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS 225 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh
Confidence 34567999999999999999999999 999999999877655444455554321 22 467899999999886
|
| >3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00019 Score=63.59 Aligned_cols=69 Identities=17% Similarity=0.272 Sum_probs=51.4
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec------------cCccccCCCCEEEEe
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL------------KWTEATQKFPYVIFC 149 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~------------~d~~~~~~~D~Vi~~ 149 (272)
+.++||.|+|+|.+|..++..|.+. |++|+.+ +++++.+.+...++.... .+.+...++|+||.+
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~vila 93 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARA--GHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSAVQGADLVLFC 93 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHT--TCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGGGTTCSEEEEC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHC--CCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHcCCCCEEEEE
Confidence 3568999999999999999999999 9999999 777777666655543321 222345789999999
Q ss_pred cCCC
Q 024143 150 APPS 153 (272)
Q Consensus 150 a~~~ 153 (272)
....
T Consensus 94 vk~~ 97 (318)
T 3hwr_A 94 VKST 97 (318)
T ss_dssp CCGG
T ss_pred cccc
Confidence 8753
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00039 Score=74.07 Aligned_cols=132 Identities=13% Similarity=0.016 Sum_probs=80.3
Q ss_pred CCCeEEEEcC-cH-HHHHHHHHHHhcCCCCeEEEEe-cCCcchh----hh----hhCC--ceeeccCc---c--------
Q 024143 83 GENDLLIVGP-GV-LGRLVAEQWRQEHPGCQIYGQT-MTADHHD----EL----INMG--ITPSLKWT---E-------- 138 (272)
Q Consensus 83 ~~~~IlItGa-Gf-iG~~l~~~L~~~~~g~~V~~~~-R~~~~~~----~l----~~~~--i~~~~~d~---~-------- 138 (272)
..+++||||+ |. ||+++++.|.++ |++|++++ |++++.. .+ ...+ +..+.+|. +
T Consensus 651 ~gKvaLVTGASgGgIG~aIAr~LA~~--GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~ 728 (1878)
T 2uv9_A 651 QGKHALMTGAGAGSIGAEVLQGLLSG--GAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY 728 (1878)
T ss_dssp TTCEEEEESCCTTSHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence 3468999996 87 999999999999 99999985 5444332 12 1112 33344443 1
Q ss_pred ---c---cC-CCCEEEEecCCCCCC----Ch---HHHHHH-----------HH-H--H-----hcCCCeEEEEecceeec
Q 024143 139 ---A---TQ-KFPYVIFCAPPSRSL----DY---PGDVRL-----------AA-L--S-----WNGEGSFLFTSSSAIYD 185 (272)
Q Consensus 139 ---~---~~-~~D~Vi~~a~~~~~~----~~---~~~~~~-----------l~-~--~-----~~gvkr~V~~SS~~vYg 185 (272)
. .. .+|+|||+|+..... +. .+.... +. . . ..+..+||++||...+-
T Consensus 729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~ 808 (1878)
T 2uv9_A 729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF 808 (1878)
T ss_dssp HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence 1 22 589999999864321 11 111111 11 0 0 11235899999975321
Q ss_pred CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH-----cC----eeEEeeCcee
Q 024143 186 CSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE-----FG----GCVLRLAGLY 231 (272)
Q Consensus 186 ~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~-----~~----~~IlRp~~iy 231 (272)
. .. ..|+.+|...+.+.+. ++ +..+.||++-
T Consensus 809 g-------------g~--~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 809 G-------------ND--GLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp S-------------CC--SSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred C-------------Cc--hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence 1 01 5799999998876542 22 5678899887
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00035 Score=65.53 Aligned_cols=68 Identities=18% Similarity=0.195 Sum_probs=52.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCC-------ce------------eeccCc-cccCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG-------IT------------PSLKWT-EATQK 142 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~-------i~------------~~~~d~-~~~~~ 142 (272)
+.|||.|+|+|++|..++..|.+. |++|++++|++++.+.+...+ ++ ....|. +++.+
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~ 84 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAH 84 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhc
Confidence 357999999999999999999999 999999999988877765432 11 111222 24678
Q ss_pred CCEEEEecCC
Q 024143 143 FPYVIFCAPP 152 (272)
Q Consensus 143 ~D~Vi~~a~~ 152 (272)
+|+||.|.+.
T Consensus 85 aDvviiaVpt 94 (478)
T 2y0c_A 85 GDVQFIAVGT 94 (478)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEEEeCC
Confidence 9999999875
|
| >1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=9.5e-05 Score=63.92 Aligned_cols=67 Identities=10% Similarity=0.084 Sum_probs=49.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCC---c----eeeccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---I----TPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~---i----~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|||.|+|+|.+|+.++..|.+. |++|++++|++++.+.+...+ . .....+.+...++|+||.|..+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~ 74 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ--GHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW 74 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH
Confidence 4899999999999999999999 999999999887655443221 1 01112224566899999999864
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00033 Score=64.80 Aligned_cols=69 Identities=17% Similarity=0.189 Sum_probs=51.1
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCC------------------ceeeccCc-cccC
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG------------------ITPSLKWT-EATQ 141 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~------------------i~~~~~d~-~~~~ 141 (272)
...+|||.|+|+|++|..++..|. + |++|++++|++++.+.+.... +. ...|. +++.
T Consensus 33 ~~~~mkIaVIGlG~mG~~lA~~La-~--G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~-~ttd~~ea~~ 108 (432)
T 3pid_A 33 GSEFMKITISGTGYVGLSNGVLIA-Q--NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFR-ATTDKHDAYR 108 (432)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEE-EESCHHHHHT
T ss_pred ccCCCEEEEECcCHHHHHHHHHHH-c--CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeE-EEcCHHHHHh
Confidence 346789999999999999999765 6 899999999988877665311 11 11232 4678
Q ss_pred CCCEEEEecCCC
Q 024143 142 KFPYVIFCAPPS 153 (272)
Q Consensus 142 ~~D~Vi~~a~~~ 153 (272)
++|+||.|.+..
T Consensus 109 ~aDvViiaVPt~ 120 (432)
T 3pid_A 109 NADYVIIATPTD 120 (432)
T ss_dssp TCSEEEECCCCE
T ss_pred CCCEEEEeCCCc
Confidence 999999998753
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00013 Score=65.88 Aligned_cols=68 Identities=18% Similarity=0.266 Sum_probs=52.1
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCcee-------------eccCc-cccCCCCEEEE
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-------------SLKWT-EATQKFPYVIF 148 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~-------------~~~d~-~~~~~~D~Vi~ 148 (272)
.+|||.|+|+|.+|..++..|.+. |++|+..+|++++.+.+...+... ...|. +++.++|+||.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVil 105 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARK--GQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILI 105 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEE
T ss_pred cCCeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEE
Confidence 347899999999999999999999 999999999987766665433211 11232 36789999998
Q ss_pred ecCC
Q 024143 149 CAPP 152 (272)
Q Consensus 149 ~a~~ 152 (272)
+.++
T Consensus 106 aVp~ 109 (356)
T 3k96_A 106 VVPS 109 (356)
T ss_dssp CCCH
T ss_pred CCCH
Confidence 8865
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00013 Score=64.58 Aligned_cols=67 Identities=9% Similarity=0.060 Sum_probs=51.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEec--CCcchhhhhhCCce----------eecc--Cc-cccCCCCEEEEe
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM--TADHHDELINMGIT----------PSLK--WT-EATQKFPYVIFC 149 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R--~~~~~~~l~~~~i~----------~~~~--d~-~~~~~~D~Vi~~ 149 (272)
|||.|+|+|.+|+.++..|.+. |++|++++| ++++.+.+...+.. .... +. ++..++|+||.|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~ 78 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG 78 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEc
Confidence 4899999999999999999999 999999999 77777666554421 1111 22 356789999999
Q ss_pred cCCC
Q 024143 150 APPS 153 (272)
Q Consensus 150 a~~~ 153 (272)
..+.
T Consensus 79 v~~~ 82 (335)
T 1txg_A 79 VSTD 82 (335)
T ss_dssp SCGG
T ss_pred CChH
Confidence 9864
|
| >3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00017 Score=64.31 Aligned_cols=66 Identities=18% Similarity=0.171 Sum_probs=50.3
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec------------cCccccCCCCEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL------------KWTEATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~------------~d~~~~~~~D~Vi~~a~ 151 (272)
+|||.|+|+|.+|..++..|.+. |++|+.++|+ +..+.+...++.... .+.+...++|+||.|..
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~--g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vilavk 79 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA--GEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAALGEQDVVIVAVK 79 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT--TCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHHHCCCSEEEECCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHHcCCCCEEEEeCC
Confidence 47999999999999999999999 9999999996 455555555554321 12234578999998886
Q ss_pred C
Q 024143 152 P 152 (272)
Q Consensus 152 ~ 152 (272)
.
T Consensus 80 ~ 80 (335)
T 3ghy_A 80 A 80 (335)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00082 Score=66.86 Aligned_cols=135 Identities=14% Similarity=0.047 Sum_probs=83.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHH-hcCCCC-eEEEEecCCc---chh----hhhhCCc--eeeccCc---c-------cc-
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWR-QEHPGC-QIYGQTMTAD---HHD----ELINMGI--TPSLKWT---E-------AT- 140 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~-~~~~g~-~V~~~~R~~~---~~~----~l~~~~i--~~~~~d~---~-------~~- 140 (272)
.++++|||+ |-||+.+++.|. ++ |. +|+.++|+.. +.. ++...|. ..+.+|. + .+
T Consensus 530 ~~~~lItGg~~GlG~aiA~~la~~~--Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~ 607 (795)
T 3slk_A 530 AGTVLVTGGTGALGAEVARHLVIER--GVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP 607 (795)
T ss_dssp TSEEEEETTTSHHHHHHHHHHHHTS--SCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred ccceeeccCCCCcHHHHHHHHHHHc--CCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 367999986 999999999998 78 98 5888999832 222 2333343 3344443 1 11
Q ss_pred --CCCCEEEEecCCCCCCCh----HHHHHHHH-----------HHh-cCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 141 --QKFPYVIFCAPPSRSLDY----PGDVRLAA-----------LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 141 --~~~D~Vi~~a~~~~~~~~----~~~~~~l~-----------~~~-~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
..+|.|||+|+......+ .+..+..+ ... ... +||++||...+-.. | +
T Consensus 608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~g~------------~-g 673 (795)
T 3slk_A 608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVLGS------------G-G 673 (795)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHHTC------------S-S
T ss_pred HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcCCC------------C-C
Confidence 268999999997543221 12222221 111 123 89999998643221 1 1
Q ss_pred CChHHHHHHHHHHHHHHc---C--eeEEeeCceecCC
Q 024143 203 RSPRTDVLLKAEKVILEF---G--GCVLRLAGLYKAD 234 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~---~--~~IlRp~~iyG~~ 234 (272)
...|+.+|...+.+.++. | ...+-||.+-.++
T Consensus 674 ~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g 710 (795)
T 3slk_A 674 QGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHG 710 (795)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcch
Confidence 257999998777665543 4 6788899876544
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0003 Score=61.55 Aligned_cols=69 Identities=17% Similarity=0.282 Sum_probs=53.9
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeecc-Cc-cccCCCCEEEEecCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK-WT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~-d~-~~~~~~D~Vi~~a~~ 152 (272)
...++|+|+|+|-+|+.+++.|... |.+|++.+|++++.+.+...+.+.... +. +.+.++|+|+.+.+.
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~ 223 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAAL--GAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA 223 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh
Confidence 4567999999999999999999999 999999999876655444456554322 22 457899999999865
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00023 Score=62.45 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=35.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhh
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE 124 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~ 124 (272)
.|++|.|+|+|.+|..++..|.+. |++|++.+|++++.+.
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~~~~~~ 53 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTEDILAK 53 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHH
Confidence 467899999999999999999999 9999999998776543
|
| >3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00045 Score=63.87 Aligned_cols=68 Identities=19% Similarity=0.286 Sum_probs=51.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeecc-------------Cc---cccCCCCEEEE
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK-------------WT---EATQKFPYVIF 148 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~-------------d~---~~~~~~D~Vi~ 148 (272)
.|+-|+|+|++|..++..|.+. ||+|++++|++++.+.+.+........ .. ...+++|+||.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~--G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvii 89 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH--GVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFII 89 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEEE
T ss_pred CccEEEeeCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEEE
Confidence 5789999999999999999999 999999999999888876432111100 00 12458999999
Q ss_pred ecCCCC
Q 024143 149 CAPPSR 154 (272)
Q Consensus 149 ~a~~~~ 154 (272)
|.+...
T Consensus 90 ~VpTp~ 95 (431)
T 3ojo_A 90 AVPTPN 95 (431)
T ss_dssp CCCCCB
T ss_pred EeCCCc
Confidence 998643
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00025 Score=63.30 Aligned_cols=69 Identities=16% Similarity=0.225 Sum_probs=54.2
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|+|.+|+.+++.|... |++|++.+|++++.+.....++... +. +.+.++|+|+.+++...
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~~--~l~e~l~~aDvVi~~vp~~~ 222 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPF--GVQRFLYTGRQPRPEEAAEFQAEFV--STPELAAQSDFIVVACSLTP 222 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGG--TCCEEEEESSSCCHHHHHTTTCEEC--CHHHHHHHCSEEEECCCCCT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcchhHHHhcCceeC--CHHHHHhhCCEEEEeCCCCh
Confidence 4557999999999999999999999 9999999998766554444455443 33 45778999999988653
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00028 Score=73.50 Aligned_cols=133 Identities=11% Similarity=0.000 Sum_probs=79.2
Q ss_pred CCCeEEEEcC-cH-HHHHHHHHHHhcCCCCeEEEE-ecCCcchhh----hhh----CC--ceeeccCc---c--------
Q 024143 83 GENDLLIVGP-GV-LGRLVAEQWRQEHPGCQIYGQ-TMTADHHDE----LIN----MG--ITPSLKWT---E-------- 138 (272)
Q Consensus 83 ~~~~IlItGa-Gf-iG~~l~~~L~~~~~g~~V~~~-~R~~~~~~~----l~~----~~--i~~~~~d~---~-------- 138 (272)
..+++||||+ |. ||+++++.|.++ |++|+++ .|++++... +.. .+ +..+.+|. +
T Consensus 475 ~GKvALVTGASgGGIGrAIAr~LA~~--GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~ 552 (1688)
T 2pff_A 475 KDKYVLITGAGKGSIGAEVLQGLLQG--GAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 552 (1688)
T ss_dssp CSCCEEECSCSSSSTHHHHHHHHHHH--TCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHHC--cCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 3467999996 77 999999999999 9999998 565544332 211 12 23333442 1
Q ss_pred ---c-----cC-CCCEEEEecCCCCCC----Ch---HHHHHH-----------HHH-H-------hcCCCeEEEEeccee
Q 024143 139 ---A-----TQ-KFPYVIFCAPPSRSL----DY---PGDVRL-----------AAL-S-------WNGEGSFLFTSSSAI 183 (272)
Q Consensus 139 ---~-----~~-~~D~Vi~~a~~~~~~----~~---~~~~~~-----------l~~-~-------~~gvkr~V~~SS~~v 183 (272)
. .. .+|+|||+|+..... +. .+.... +.. . ..+..+||++||...
T Consensus 553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG 632 (1688)
T 2pff_A 553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 632 (1688)
T ss_dssp HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHh
Confidence 1 22 589999999864322 11 111111 110 1 112258999998643
Q ss_pred ecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-----C----eeEEeeCceec
Q 024143 184 YDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-----G----GCVLRLAGLYK 232 (272)
Q Consensus 184 Yg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-----~----~~IlRp~~iyG 232 (272)
+.. .. ..|+.+|+..+.+.... + +..+.||++.+
T Consensus 633 ~~G-------------g~--saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 633 TFG-------------GD--GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp TSS-------------CB--TTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred ccC-------------Cc--hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 210 11 57999999999873321 2 35577888874
|
| >1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00012 Score=62.71 Aligned_cols=64 Identities=19% Similarity=0.305 Sum_probs=49.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEec--CCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM--TADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R--~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
|||.|+|+|.+|+.+++.|.+. |++|++.+| +++..+.+...++. .+. +++.++|+||.|.++.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~--g~~V~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~aDvvi~~v~~~ 67 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR--GVEVVTSLEGRSPSTIERARTVGVT---ETSEEDVYSCPVVISAVTPG 67 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEECCTTCCHHHHHHHHHHTCE---ECCHHHHHTSSEEEECSCGG
T ss_pred CeEEEEechHHHHHHHHHHHHC--CCeEEEeCCccCHHHHHHHHHCCCc---CCHHHHHhcCCEEEEECCCH
Confidence 4799999999999999999999 999999877 33444445444554 232 4567899999998864
|
| >1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00025 Score=64.12 Aligned_cols=67 Identities=15% Similarity=0.100 Sum_probs=50.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCC-------CeEEEEecCCc-----chhhhhhCC--------------ceeeccC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-------CQIYGQTMTAD-----HHDELINMG--------------ITPSLKW 136 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g-------~~V~~~~R~~~-----~~~~l~~~~--------------i~~~~~d 136 (272)
+|+||.|+|+|.+|+.++..|.+. | ++|++.+|+++ +.+.+...+ +.. ..|
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~--G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~-~~~ 96 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTN--AKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVA-HSD 96 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHH--HHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEE-ESS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHc--CCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEE-ECC
Confidence 356899999999999999999999 9 99999999887 665554321 111 122
Q ss_pred c-cccCCCCEEEEecCC
Q 024143 137 T-EATQKFPYVIFCAPP 152 (272)
Q Consensus 137 ~-~~~~~~D~Vi~~a~~ 152 (272)
. ++..++|+||.+..+
T Consensus 97 ~~ea~~~aDvVilav~~ 113 (375)
T 1yj8_A 97 LASVINDADLLIFIVPC 113 (375)
T ss_dssp THHHHTTCSEEEECCCH
T ss_pred HHHHHcCCCEEEEcCCH
Confidence 2 356789999999875
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00082 Score=59.52 Aligned_cols=68 Identities=12% Similarity=0.160 Sum_probs=47.7
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCC--CeEEEEecCCcchh--hhhhCC----ceeecc--Cc-cccCCCCEEEEecCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHD--ELINMG----ITPSLK--WT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g--~~V~~~~R~~~~~~--~l~~~~----i~~~~~--d~-~~~~~~D~Vi~~a~~ 152 (272)
|||.|+|+ |++|..++..|... + ++|+.+++++.+.. .+.... +..... |. ++++++|+||++++.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~--~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~ 78 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS--PLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV 78 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC--TTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCc
Confidence 48999997 99999999999988 7 79999999762111 222211 122111 33 368999999999985
Q ss_pred CC
Q 024143 153 SR 154 (272)
Q Consensus 153 ~~ 154 (272)
..
T Consensus 79 ~~ 80 (314)
T 1mld_A 79 PR 80 (314)
T ss_dssp CC
T ss_pred CC
Confidence 43
|
| >1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.001 Score=62.10 Aligned_cols=68 Identities=13% Similarity=0.107 Sum_probs=50.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----------CC----------ceeeccCccccC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----------MG----------ITPSLKWTEATQ 141 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----------~~----------i~~~~~d~~~~~ 141 (272)
.+++|.|+|+|.+|..++..|.+. |++|++.+++++..+.... .+ ......+.+.+.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 113 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELS 113 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGGGT
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHHHC
Confidence 457899999999999999999999 9999999998765443211 01 011123445678
Q ss_pred CCCEEEEecCC
Q 024143 142 KFPYVIFCAPP 152 (272)
Q Consensus 142 ~~D~Vi~~a~~ 152 (272)
++|+||-+++.
T Consensus 114 ~aDlVIeaVpe 124 (463)
T 1zcj_A 114 TVDLVVEAVFE 124 (463)
T ss_dssp TCSEEEECCCS
T ss_pred CCCEEEEcCCC
Confidence 99999999964
|
| >3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00027 Score=62.37 Aligned_cols=67 Identities=15% Similarity=0.139 Sum_probs=49.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec-------------cCccccCCCCEEEEec
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-------------KWTEATQKFPYVIFCA 150 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~-------------~d~~~~~~~D~Vi~~a 150 (272)
+|||.|+|+|-+|..++..|.+. |++|+.++|++ .+.+...|+.... .+.+....+|+||.+.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~vilav 77 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRS--GEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPMDLVLVGL 77 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHT--SCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHHHCCCSEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCCCEEEEec
Confidence 46899999999999999999999 99999999976 3555555543321 1223456899999998
Q ss_pred CCCC
Q 024143 151 PPSR 154 (272)
Q Consensus 151 ~~~~ 154 (272)
.+..
T Consensus 78 k~~~ 81 (312)
T 3hn2_A 78 KTFA 81 (312)
T ss_dssp CGGG
T ss_pred CCCC
Confidence 7543
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00032 Score=60.88 Aligned_cols=69 Identities=17% Similarity=0.203 Sum_probs=53.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-CceeeccCc-cccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
..++|+|+|+|-+|+.+++.|.+. |++|++.+|++++.+.+... ++.... +. +.+.++|+||.|.+...
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~--g~~V~v~~r~~~~~~~l~~~~g~~~~~-~~~~~~~~aDiVi~atp~~~ 198 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKE--GAKVFLWNRTKEKAIKLAQKFPLEVVN-SPEEVIDKVQVIVNTTSVGL 198 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSHHHHHHHTTTSCEEECS-CGGGTGGGCSEEEECSSTTS
T ss_pred CCCEEEEECchHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHcCCeeeh-hHHhhhcCCCEEEEeCCCCC
Confidence 347899999999999999999999 99999999998776655432 443321 32 45678999999998754
|
| >1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=8.4e-05 Score=66.97 Aligned_cols=66 Identities=14% Similarity=0.171 Sum_probs=50.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCce------------ee-ccCc-cccCCCCEEEEec
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT------------PS-LKWT-EATQKFPYVIFCA 150 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~------------~~-~~d~-~~~~~~D~Vi~~a 150 (272)
+||.|+|+|.+|..++..|.+. |++|++.+|++++.+.+...+.. .. ..+. ++..++|+||.|.
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav 93 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKK--CREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVI 93 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTT--EEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECC
Confidence 3899999999999999999999 99999999998776665433210 11 1222 3567899999998
Q ss_pred CC
Q 024143 151 PP 152 (272)
Q Consensus 151 ~~ 152 (272)
.+
T Consensus 94 ~~ 95 (366)
T 1evy_A 94 PT 95 (366)
T ss_dssp CH
T ss_pred Ch
Confidence 75
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00016 Score=64.84 Aligned_cols=66 Identities=12% Similarity=0.259 Sum_probs=52.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-ccc----CCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EAT----QKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~----~~~D~Vi~~a~~ 152 (272)
+++|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.....|+... .+. +++ .++|+||.|.++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~--G~~V~~~dr~~~~~~~a~~~G~~~~-~~~~e~~~~a~~~aDlVilavP~ 78 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA--NHSVFGYNRSRSGAKSAVDEGFDVS-ADLEATLQRAAAEDALIVLAVPM 78 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHTTCCEE-SCHHHHHHHHHHTTCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeee-CCHHHHHHhcccCCCEEEEeCCH
Confidence 36899999999999999999999 9999999999887776666676432 222 222 358999999885
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00044 Score=59.85 Aligned_cols=70 Identities=16% Similarity=0.181 Sum_probs=50.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-Cc--eeeccCcccc--CCCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GI--TPSLKWTEAT--QKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i--~~~~~d~~~~--~~~D~Vi~~a~~~~ 154 (272)
..++++|+|+|-+|+.+++.|.+. |.+|++..|++++.+.+... +. .....+.+.+ .++|+||++++...
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~--G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~ 192 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSL--DCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGI 192 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCC
Confidence 457899999999999999999999 99999999998776554321 11 1111222223 48999999998643
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00093 Score=57.89 Aligned_cols=66 Identities=18% Similarity=0.234 Sum_probs=53.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
.++++|+|+|-.|+.++..|.+. |.+|++..|++++.+.+...++.....+ .+.++|+||++.+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~--G~~v~V~nRt~~ka~~la~~~~~~~~~~--~l~~~DiVInaTp~G 183 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ--GLQVSVLNRSSRGLDFFQRLGCDCFMEP--PKSAFDLIINATSAS 183 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCTTHHHHHHHTCEEESSC--CSSCCSEEEECCTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHCCCeEecHH--HhccCCEEEEcccCC
Confidence 57999999999999999999999 9999999999998877654454443322 234899999998754
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00054 Score=61.66 Aligned_cols=71 Identities=15% Similarity=0.237 Sum_probs=54.7
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|..- |++|++.+|++...+.....++.....-.+.++.+|+|+.+.+...
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~ 232 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPF--GCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTE 232 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGG--CCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCT
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHC--CCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCH
Confidence 5568999999999999999999999 9999999998765544444565543111257889999999888643
|
| >2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00023 Score=60.85 Aligned_cols=61 Identities=11% Similarity=0.169 Sum_probs=47.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCC----CeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g----~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
++||.|+|+|.+|+.+++.|.+. | ++|++.+|++++ .++... .+. +...++|+||.|..+.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~--g~~~~~~v~~~~~~~~~------~g~~~~-~~~~~~~~~~D~vi~~v~~~ 69 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA--NIIKKENLFYYGPSKKN------TTLNYM-SSNEELARHCDIIVCAVKPD 69 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH--TSSCGGGEEEECSSCCS------SSSEEC-SCHHHHHHHCSEEEECSCTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCCCCCeEEEEeCCccc------CceEEe-CCHHHHHhcCCEEEEEeCHH
Confidence 46899999999999999999999 8 799999998766 244332 222 4566889999998753
|
| >1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00032 Score=62.72 Aligned_cols=67 Identities=15% Similarity=0.165 Sum_probs=52.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhhhhhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
.+++|.|+|+|.+|+.+++.|.+. |++|++.+|++++ .+.....|+... +. +++.++|+||.+.++.
T Consensus 15 ~~~~I~IIG~G~mG~alA~~L~~~--G~~V~~~~~~~~~~~~~a~~~G~~~~--~~~e~~~~aDvVilavp~~ 83 (338)
T 1np3_A 15 QGKKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEAHGLKVA--DVKTAVAAADVVMILTPDE 83 (338)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHTTCEEE--CHHHHHHTCSEEEECSCHH
T ss_pred cCCEEEEECchHHHHHHHHHHHHC--cCEEEEEECChHHHHHHHHHCCCEEc--cHHHHHhcCCEEEEeCCcH
Confidence 346899999999999999999999 9999999998765 333444566543 33 4677899999998764
|
| >2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.40 E-value=3.6e-05 Score=63.89 Aligned_cols=68 Identities=15% Similarity=0.214 Sum_probs=51.1
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
..++|.|+|+|.+|+.+++.|.+. |++|++.+|+++ .+.+...++... ...+++.++|+||.+..+..
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~~-~~~~~~~g~~~~-~~~~~~~~aDvVilav~~~~ 85 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQC--GYSVVFGSRNPQ-VSSLLPRGAEVL-CYSEAASRSDVIVLAVHREH 85 (201)
Confidence 346899999999999999999999 999999999876 333333344332 12246778999999988643
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00056 Score=60.24 Aligned_cols=69 Identities=20% Similarity=0.271 Sum_probs=50.0
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchh--hhh-hCC------ceeecc-CccccCCCCEEEEec
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHD--ELI-NMG------ITPSLK-WTEATQKFPYVIFCA 150 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~--~l~-~~~------i~~~~~-d~~~~~~~D~Vi~~a 150 (272)
+++||.|+|+|.+|..++..|... |+ +|+.++|++++.+ .+. ..+ ...... +.+.+.++|+||.++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~--g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v 83 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQR--GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITA 83 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECC
Confidence 357999999999999999999999 98 9999999875543 111 111 122112 445678999999999
Q ss_pred CCC
Q 024143 151 PPS 153 (272)
Q Consensus 151 ~~~ 153 (272)
+..
T Consensus 84 ~~~ 86 (319)
T 1lld_A 84 GPR 86 (319)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00059 Score=60.49 Aligned_cols=68 Identities=15% Similarity=0.000 Sum_probs=51.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhhhhh---C------CceeeccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELIN---M------GITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~l~~---~------~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|||.|+|+|.+|..++..|.+. |+ +|+.+++++++.+.+.. . .......|.++++++|+||.+++..
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~--g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~aDvViiav~~~ 78 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK--GFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVP 78 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCCHHHhCCCCEEEEccCCC
Confidence 4899999999999999999999 99 99999998765544321 0 1122223446788999999999864
Q ss_pred C
Q 024143 154 R 154 (272)
Q Consensus 154 ~ 154 (272)
.
T Consensus 79 ~ 79 (319)
T 1a5z_A 79 Q 79 (319)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00021 Score=66.69 Aligned_cols=64 Identities=19% Similarity=0.229 Sum_probs=52.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc---c-----ccCCCCEEEEe
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-----ATQKFPYVIFC 149 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~---~-----~~~~~D~Vi~~ 149 (272)
.|||+|.|+|-+|++|++.|.++ ||+|+++++++++...+.. .++..+.+|. + -.+++|.+|-+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~--~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE--NNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAV 75 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST--TEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred cCEEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence 47999999999999999999999 9999999999988877653 5777777764 1 25789988643
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00058 Score=56.71 Aligned_cols=50 Identities=20% Similarity=0.306 Sum_probs=39.8
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
..+++|.|+|+|.+|+.+++.|.+. |++|++.+|+++ .+.++|+||.+..
T Consensus 17 ~~~~~I~iiG~G~mG~~la~~l~~~--g~~V~~~~~~~~------------------~~~~aD~vi~av~ 66 (209)
T 2raf_A 17 FQGMEITIFGKGNMGQAIGHNFEIA--GHEVTYYGSKDQ------------------ATTLGEIVIMAVP 66 (209)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTCC------------------CSSCCSEEEECSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHH------------------HhccCCEEEEcCC
Confidence 3467999999999999999999999 999999998755 2346677777665
|
| >1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00038 Score=61.12 Aligned_cols=67 Identities=13% Similarity=0.150 Sum_probs=52.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-------CceeeccCccccCCCCEEEEecCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------GITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-------~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
..++|.|+|+|.+|+.++..|. . |++|++.+|++++.+..... ++... .+.+.+.++|+||-|.+..
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~-~~~~~~~~aDlVieavpe~ 84 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVSEKALEAAREQIPEELLSKIEFT-TTLEKVKDCDIVMEAVFED 84 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHSCGGGGGGEEEE-SSCTTGGGCSEEEECCCSC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECCHHHHHHHHHHHHHHHhCCeEEe-CCHHHHcCCCEEEEcCcCC
Confidence 3478999999999999999999 9 99999999998877655443 33322 2333478999999998754
|
| >1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00042 Score=63.49 Aligned_cols=66 Identities=14% Similarity=0.117 Sum_probs=50.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCce-----------------eeccCc-cccCCCCEE
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT-----------------PSLKWT-EATQKFPYV 146 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~-----------------~~~~d~-~~~~~~D~V 146 (272)
|||.|+|+|++|..++..|.+ |++|++++|++++.+.+...+.. ....+. +++.++|+|
T Consensus 1 MkI~VIG~G~vG~~~A~~La~---G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvv 77 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL---QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELV 77 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEE
T ss_pred CEEEEECCCHHHHHHHHHHhC---CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEE
Confidence 489999999999999999874 79999999998887777554431 111222 346689999
Q ss_pred EEecCCC
Q 024143 147 IFCAPPS 153 (272)
Q Consensus 147 i~~a~~~ 153 (272)
|.|.+..
T Consensus 78 iiavpt~ 84 (402)
T 1dlj_A 78 IIATPTN 84 (402)
T ss_dssp EECCCCC
T ss_pred EEecCCC
Confidence 9998865
|
| >3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.25 E-value=2e-05 Score=75.91 Aligned_cols=58 Identities=3% Similarity=-0.095 Sum_probs=47.0
Q ss_pred cceeeecccCcccc--cccccccCCcchhhhcc-ccccccc-cccccceecccccccccccc
Q 024143 2 GTISCTNTVSLNGA--CTRFFAADSLSSKASSV-FFNNRTW-KLKLRPLVASSSSSSMATNF 59 (272)
Q Consensus 2 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 59 (272)
..+|+.++.....- .++||++|||||+|-|| -++|+.. +++++.+|.++|...++..+
T Consensus 551 ~~~~~~~l~~~~~~~~~d~Ff~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~pti~~la~~l 612 (617)
T 3rg2_A 551 REVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAWWKLL 612 (617)
T ss_dssp HHHHGGGSCTTCCCCTTSCGGGGTCCHHHHHHHHHHHHTTSTTCCHHHHHHSCCHHHHHHHH
T ss_pred HHHHHHHhccCCCCCCCCChhhcCccHHHHHHHHHHHHHhcCCCCHHHHhcCCCHHHHHHHH
Confidence 45788888643222 28999999999999999 8898864 99999999999998887654
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00056 Score=57.91 Aligned_cols=67 Identities=19% Similarity=0.264 Sum_probs=47.3
Q ss_pred CeEEEE-c----------------CcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---------c
Q 024143 85 NDLLIV-G----------------PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---------E 138 (272)
Q Consensus 85 ~~IlIt-G----------------aGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---------~ 138 (272)
++|||| | +|.+|..+++++.++ |++|+.+.|....... ...+++...... +
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~--Ga~V~lv~~~~~~~~~-~~~~~~~~~v~s~~em~~~v~~ 80 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSA--GYEVCLITTKRALKPE-PHPNLSIREITNTKDLLIEMQE 80 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHT--TCEEEEEECTTSCCCC-CCTTEEEEECCSHHHHHHHHHH
T ss_pred CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHC--CCEEEEEeCCcccccc-CCCCeEEEEHhHHHHHHHHHHH
Confidence 689999 4 589999999999999 9999999997532210 012344332221 1
Q ss_pred ccCCCCEEEEecCCCC
Q 024143 139 ATQKFPYVIFCAPPSR 154 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~ 154 (272)
.+.++|++|++|+...
T Consensus 81 ~~~~~Dili~aAAvsD 96 (232)
T 2gk4_A 81 RVQDYQVLIHSMAVSD 96 (232)
T ss_dssp HGGGCSEEEECSBCCS
T ss_pred hcCCCCEEEEcCcccc
Confidence 3568999999999754
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00037 Score=62.29 Aligned_cols=68 Identities=16% Similarity=0.206 Sum_probs=52.9
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|+|.+|+.+++.|... |++|++.+|++++ +.....++... +. +++.++|+|+.+.+...
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~-~~~~~~g~~~~--~l~~~l~~aDvVil~vp~~~ 216 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGF--NMRILYYSRTRKE-EVERELNAEFK--PLEDLLRESDFVVLAVPLTR 216 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCH-HHHHHHCCEEC--CHHHHHHHCSEEEECCCCCT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhC--CCEEEEECCCcch-hhHhhcCcccC--CHHHHHhhCCEEEECCCCCh
Confidence 4567999999999999999999999 9999999998766 33333454432 32 45778999999988754
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0025 Score=56.37 Aligned_cols=68 Identities=15% Similarity=0.153 Sum_probs=50.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhh----hhh------CCceee-ccCccccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN------MGITPS-LKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~----l~~------~~i~~~-~~d~~~~~~~D~Vi~~a~ 151 (272)
|||.|+|+|.+|+.++..|... +. +|+.+++++++.+. +.. ...... ..+.++++++|+||.+++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag 78 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ--DVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAG 78 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCC
Confidence 5899999999999999999998 76 99999998876432 221 122222 234578999999999998
Q ss_pred CCC
Q 024143 152 PSR 154 (272)
Q Consensus 152 ~~~ 154 (272)
...
T Consensus 79 ~~~ 81 (314)
T 3nep_X 79 LPR 81 (314)
T ss_dssp C--
T ss_pred CCC
Confidence 643
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0025 Score=55.90 Aligned_cols=68 Identities=16% Similarity=-0.042 Sum_probs=50.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhh----hhh------CCceee-ccCccccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN------MGITPS-LKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~----l~~------~~i~~~-~~d~~~~~~~D~Vi~~a~ 151 (272)
|||.|+|+|.+|..++..|... |+ +|..+++++++.+. +.. ...... ..|.++++++|+||.+++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~--~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~~aDiVViaag 78 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAG 78 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCCHHHhCCCCEEEECCC
Confidence 5899999999999999999999 87 99999998766531 111 111222 134568999999999998
Q ss_pred CCC
Q 024143 152 PSR 154 (272)
Q Consensus 152 ~~~ 154 (272)
...
T Consensus 79 ~~~ 81 (294)
T 1oju_A 79 LAR 81 (294)
T ss_dssp CCC
T ss_pred CCC
Confidence 643
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0028 Score=56.47 Aligned_cols=67 Identities=12% Similarity=0.090 Sum_probs=49.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhh----hh----CC--ceee-ccCcc-ccCCCCEEEEec
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL----IN----MG--ITPS-LKWTE-ATQKFPYVIFCA 150 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l----~~----~~--i~~~-~~d~~-~~~~~D~Vi~~a 150 (272)
++||.|+|+|.+|..++..|... |+ +|+.+++++++.+.. .. .. .... ..|.+ +++++|+||.++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~--g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALR--ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA 86 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEcc
Confidence 46899999999999999999999 98 999999988765441 11 11 1111 13443 789999999999
Q ss_pred CC
Q 024143 151 PP 152 (272)
Q Consensus 151 ~~ 152 (272)
+.
T Consensus 87 g~ 88 (331)
T 1pzg_A 87 GL 88 (331)
T ss_dssp SC
T ss_pred CC
Confidence 64
|
| >2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00062 Score=63.87 Aligned_cols=67 Identities=16% Similarity=0.233 Sum_probs=52.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC----CceeeccCc-cccC---CCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPSLKWT-EATQ---KFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~----~i~~~~~d~-~~~~---~~D~Vi~~a~~~ 153 (272)
+++|.|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+... ++... .+. ++.. .+|+||.+.+..
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~--G~~V~v~~r~~~~~~~l~~~~~~~gi~~~-~s~~e~v~~l~~aDvVil~Vp~~ 89 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR--GYTVSIFNRSREKTEEVIAENPGKKLVPY-YTVKEFVESLETPRRILLMVKAG 89 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHSTTSCEEEC-SSHHHHHHTBCSSCEEEECSCSS
T ss_pred CCeEEEEccHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHhhCCCCCeEEe-CCHHHHHhCCCCCCEEEEECCCH
Confidence 46899999999999999999999 99999999998887766543 44432 222 3333 499999998864
|
| >2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} | Back alignment and structure |
|---|
Probab=97.21 E-value=1.7e-05 Score=74.51 Aligned_cols=59 Identities=19% Similarity=0.142 Sum_probs=48.2
Q ss_pred CcceeeecccCccc-ccccccccCCcchhhhcc-ccccccc--cccccceecccccccccccc
Q 024143 1 MGTISCTNTVSLNG-ACTRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNF 59 (272)
Q Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 59 (272)
|+.||+.++.--.- ..++||++|||||+|-|+ -.+|+.+ ++++..+|..++...++..+
T Consensus 15 l~~iw~~vL~~~~i~~~d~ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~~ 77 (520)
T 2jgp_A 15 LAQVWEQVLNVPQVGALDDFFALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFI 77 (520)
T ss_dssp HHHHHHHHHTCSCCCTTCBTTTTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCccHHHhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHH
Confidence 35789998875221 128999999999999999 8899986 88899999999998887654
|
| >2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00079 Score=63.12 Aligned_cols=66 Identities=15% Similarity=0.244 Sum_probs=52.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc-cc---cCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT-EA---TQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~-~~---~~~~D~Vi~~a~~~ 153 (272)
++|.|+|+|.+|+.++..|.+. |++|++.+|++++.+.+.. .++... .+. +. ++++|+||.|.+..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~-~~~~e~v~~l~~aDvVilaVp~~ 77 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAKGTKVLGA-HSLEEMVSKLKKPRRIILLVKAG 77 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTTTSSCEEC-SSHHHHHHHBCSSCEEEECSCTT
T ss_pred CeEEEEChHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhccccCCCeEEe-CCHHHHHhhccCCCEEEEeCCCh
Confidence 5899999999999999999999 9999999999888777665 344332 232 23 35899999998764
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00069 Score=60.55 Aligned_cols=67 Identities=15% Similarity=0.122 Sum_probs=45.1
Q ss_pred CeEEEEc-CcHHHHHHHHHHHhcCCCC--e-----EEEEecCCc--chh----hhhhCC---ceee-c--cCccccCCCC
Q 024143 85 NDLLIVG-PGVLGRLVAEQWRQEHPGC--Q-----IYGQTMTAD--HHD----ELINMG---ITPS-L--KWTEATQKFP 144 (272)
Q Consensus 85 ~~IlItG-aGfiG~~l~~~L~~~~~g~--~-----V~~~~R~~~--~~~----~l~~~~---i~~~-~--~d~~~~~~~D 144 (272)
+||+||| +|+||++++..|... +. + ++.+++.+. +.. .+.... ...+ . .+.++++++|
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~--~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daD 81 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNG--SVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD 81 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCS
T ss_pred eEEEEECCCCHHHHHHHHHHHhC--CCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCC
Confidence 5899999 599999999999887 55 4 888888642 221 222211 1111 1 1225789999
Q ss_pred EEEEecCCC
Q 024143 145 YVIFCAPPS 153 (272)
Q Consensus 145 ~Vi~~a~~~ 153 (272)
+||++|+..
T Consensus 82 vVvitAg~p 90 (333)
T 5mdh_A 82 VAILVGSMP 90 (333)
T ss_dssp EEEECCSCC
T ss_pred EEEEeCCCC
Confidence 999999854
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00052 Score=61.68 Aligned_cols=71 Identities=14% Similarity=0.114 Sum_probs=54.2
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHH-hcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWR-QEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~-~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
....++|.|+|.|.||+.+++.|. .. |++|++.+|++.+.+.....++... .+. +.+.++|+|+.+++...
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~~--G~~V~~~d~~~~~~~~~~~~g~~~~-~~l~ell~~aDvVil~vp~~~ 232 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHGL--GMKLVYYDVAPADAETEKALGAERV-DSLEELARRSDCVSVSVPYMK 232 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHHHTCEEC-SSHHHHHHHCSEEEECCCCSG
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHhc--CCEEEEECCCCcchhhHhhcCcEEe-CCHHHHhccCCEEEEeCCCCh
Confidence 355679999999999999999999 88 9999999998766544333455443 232 45778999999988753
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00056 Score=60.40 Aligned_cols=68 Identities=15% Similarity=0.058 Sum_probs=53.1
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|... |++|++.+|++++ ......+++.. +. +.+.++|+|+.+.+...
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~-~~~~~~g~~~~--~l~ell~~aDvV~l~~p~~~ 208 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANAL--GMNILLYDPYPNE-ERAKEVNGKFV--DLETLLKESDVVTIHVPLVE 208 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCH-HHHHHTTCEEC--CHHHHHHHCSEEEECCCCST
T ss_pred cCCceEEEEccCHHHHHHHHHHHHC--CCEEEEECCCCCh-hhHhhcCcccc--CHHHHHhhCCEEEEecCCCh
Confidence 4557999999999999999999999 9999999998765 33334565443 32 46778999999887644
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00082 Score=60.80 Aligned_cols=71 Identities=17% Similarity=0.133 Sum_probs=54.6
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHHhcCCCCe-EEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~-V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
....++|.|+|.|.||+.+++.|... |++ |++.+|++...+.....++... .+. +.+.++|+|+.+++...
T Consensus 161 ~l~g~tvgIIG~G~IG~~vA~~l~~~--G~~~V~~~d~~~~~~~~~~~~g~~~~-~~l~ell~~aDvV~l~~P~t~ 233 (364)
T 2j6i_A 161 DIEGKTIATIGAGRIGYRVLERLVPF--NPKELLYYDYQALPKDAEEKVGARRV-ENIEELVAQADIVTVNAPLHA 233 (364)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGG--CCSEEEEECSSCCCHHHHHHTTEEEC-SSHHHHHHTCSEEEECCCCST
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhC--CCcEEEEECCCccchhHHHhcCcEec-CCHHHHHhcCCEEEECCCCCh
Confidence 35567999999999999999999999 997 9999998766554444565543 122 46779999999888653
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00053 Score=61.28 Aligned_cols=68 Identities=18% Similarity=0.185 Sum_probs=52.6
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
....++|.|+|.|.+|+.+++.|... |++|++.+|++++ ......++... +. +.+.++|+|+.+++..
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~--G~~V~~~d~~~~~-~~~~~~g~~~~--~l~e~l~~aDiVil~vp~~ 211 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPF--GVKLYYWSRHRKV-NVEKELKARYM--DIDELLEKSDIVILALPLT 211 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCH-HHHHHHTEEEC--CHHHHHHHCSEEEECCCCC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcch-hhhhhcCceec--CHHHHHhhCCEEEEcCCCC
Confidence 35567999999999999999999999 9999999998765 32223354432 33 4567899999998875
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0013 Score=58.38 Aligned_cols=69 Identities=10% Similarity=0.080 Sum_probs=47.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhh----hhhC-----CceeeccCccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-----GITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~----l~~~-----~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
++||.|+|+|++|..++..|... ++ +|+.++.++++.+. +... .+.....+.++++++|+||.+++.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~--~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~ 84 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR--QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGA 84 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCC
Confidence 36899999999999999999998 77 99999998765432 2111 111222344678999999999986
Q ss_pred CC
Q 024143 153 SR 154 (272)
Q Consensus 153 ~~ 154 (272)
..
T Consensus 85 p~ 86 (318)
T 1y6j_A 85 NR 86 (318)
T ss_dssp --
T ss_pred CC
Confidence 43
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0029 Score=56.46 Aligned_cols=72 Identities=19% Similarity=0.113 Sum_probs=52.3
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhh----hhhC-----Cceee-ccCccccCCCCEEEE
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-----GITPS-LKWTEATQKFPYVIF 148 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~----l~~~-----~i~~~-~~d~~~~~~~D~Vi~ 148 (272)
...++||.|+|+|.+|..++..|..+ |. +|+.+++++++.+. +... ..... ..|.+.++++|+||.
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~~~~aDiVvi 93 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK--DLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSVTANSKLVII 93 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGGGTTEEEEEE
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHHhCCCCEEEE
Confidence 34567999999999999999999998 76 89999998665433 2211 11111 235567999999999
Q ss_pred ecCCCC
Q 024143 149 CAPPSR 154 (272)
Q Consensus 149 ~a~~~~ 154 (272)
+++...
T Consensus 94 ~aG~~~ 99 (331)
T 4aj2_A 94 TAGARQ 99 (331)
T ss_dssp CCSCCC
T ss_pred ccCCCC
Confidence 998643
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0037 Score=55.31 Aligned_cols=69 Identities=13% Similarity=0.202 Sum_probs=50.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCC--CeEEEEecCCcchhh----hhh------CCceeeccCccccCCCCEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDE----LIN------MGITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g--~~V~~~~R~~~~~~~----l~~------~~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
++||.|+|+|.+|..++..|..+ + .+|..+++++++.+. +.. ..+.....+.++++++|+||.+++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~--~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag 83 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQ--SIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAG 83 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--CSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCC
Confidence 46999999999999999999988 6 489999987654432 111 122222233467999999999998
Q ss_pred CCC
Q 024143 152 PSR 154 (272)
Q Consensus 152 ~~~ 154 (272)
...
T Consensus 84 ~~~ 86 (317)
T 3d0o_A 84 AAQ 86 (317)
T ss_dssp CCC
T ss_pred CCC
Confidence 643
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00066 Score=59.18 Aligned_cols=69 Identities=16% Similarity=0.177 Sum_probs=50.5
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-------C--ceeeccC-ccccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------G--ITPSLKW-TEATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-------~--i~~~~~d-~~~~~~~D~Vi~~a~~ 152 (272)
..++++|+|+|-+|+.+++.|.+. | +|++..|++++.+.+... . +.....+ .+.+.++|+||++++.
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~--G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~ 203 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKD--N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI 203 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSS--S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--C-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCC
Confidence 457899999999999999999999 9 999999987765544211 0 0111122 2456789999999986
Q ss_pred CC
Q 024143 153 SR 154 (272)
Q Consensus 153 ~~ 154 (272)
..
T Consensus 204 ~~ 205 (287)
T 1nvt_A 204 GM 205 (287)
T ss_dssp TC
T ss_pred CC
Confidence 54
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00048 Score=61.50 Aligned_cols=68 Identities=13% Similarity=0.221 Sum_probs=52.2
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
...++|.|+|.|.||+.+++.|... |++|++.+|++.+.......++... +. +.++.+|+|+.+.+..
T Consensus 143 l~g~tvGIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~~--~l~ell~~aDvV~l~~P~t 211 (330)
T 4e5n_A 143 LDNATVGFLGMGAIGLAMADRLQGW--GATLQYHEAKALDTQTEQRLGLRQV--ACSELFASSDFILLALPLN 211 (330)
T ss_dssp STTCEEEEECCSHHHHHHHHHTTTS--CCEEEEECSSCCCHHHHHHHTEEEC--CHHHHHHHCSEEEECCCCS
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCCCCcHhHHHhcCceeC--CHHHHHhhCCEEEEcCCCC
Confidence 4568999999999999999999988 9999999998754433333455433 22 4677899999888754
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0011 Score=62.12 Aligned_cols=69 Identities=14% Similarity=0.214 Sum_probs=52.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCC---ceee-ccCc-cc---cCCCCEEEEecCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---ITPS-LKWT-EA---TQKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~---i~~~-~~d~-~~---~~~~D~Vi~~a~~~ 153 (272)
.|++|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...+ .... ..+. ++ ++++|+||.+.+..
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~ 79 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAG 79 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred CCCEEEEEChhHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCCh
Confidence 357899999999999999999999 999999999998887765442 2211 1222 22 34799999998764
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00084 Score=58.09 Aligned_cols=70 Identities=17% Similarity=0.084 Sum_probs=50.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-Cc--eeeccCcccc-C-CCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GI--TPSLKWTEAT-Q-KFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i--~~~~~d~~~~-~-~~D~Vi~~a~~~~ 154 (272)
..++++|+|+|-+|+.++..|.+. |.+|++..|++++.+.+... +. .....+.+.+ . ++|+||++.+...
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~--G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQA--QQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 192 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCC
Confidence 457899999999999999999999 99999999998776655321 10 1111222233 3 8999999998654
|
| >2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0011 Score=62.36 Aligned_cols=66 Identities=14% Similarity=0.192 Sum_probs=51.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc-cccC---CCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT-EATQ---KFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~-~~~~---~~D~Vi~~a~~~ 153 (272)
++|.|+|+|.+|+.++..|.+. |++|++.+|++++.+.+.. .++... .+. ++.. ++|+||.+.+..
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~-~s~~e~v~~l~~aDvVil~Vp~~ 85 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH--GFTVCAYNRTQSKVDHFLANEAKGKSIIGA-TSIEDFISKLKRPRKVMLLVKAG 85 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSHHHHHHHHTTTTTSSEECC-SSHHHHHHTSCSSCEEEECCCSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHcccccCCCeEEe-CCHHHHHhcCCCCCEEEEEcCCh
Confidence 5899999999999999999999 9999999999988877765 344332 222 2333 499999998763
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0011 Score=60.16 Aligned_cols=68 Identities=22% Similarity=0.238 Sum_probs=54.5
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC-------------------------
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW------------------------- 136 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d------------------------- 136 (272)
....||+|+|+|-+|..+++.+... |.+|++++|++++.+.+...|.++...+
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l 259 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL 259 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence 3557999999999999999999999 9999999999988777766665543210
Q ss_pred ccccCCCCEEEEecC
Q 024143 137 TEATQKFPYVIFCAP 151 (272)
Q Consensus 137 ~~~~~~~D~Vi~~a~ 151 (272)
.+.+.++|+||.++.
T Consensus 260 ~e~l~~aDIVI~tv~ 274 (381)
T 3p2y_A 260 EDAITKFDIVITTAL 274 (381)
T ss_dssp HHHHTTCSEEEECCC
T ss_pred HHHHhcCCEEEECCC
Confidence 035789999999874
|
| >2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00089 Score=62.65 Aligned_cols=67 Identities=16% Similarity=0.216 Sum_probs=51.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC----CceeeccCc-ccc---CCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPSLKWT-EAT---QKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~----~i~~~~~d~-~~~---~~~D~Vi~~a~~~ 153 (272)
+++|.|+|+|.+|+.+++.|.+. |++|.+.+|++++.+.+... ++... .+. +.. +++|+||.|.+..
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~gi~~~-~s~~e~v~~l~~aDvVilavp~~ 79 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR--GYTVAIYNRTTSKTEEVFKEHQDKNLVFT-KTLEEFVGSLEKPRRIMLMVQAG 79 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTSCEEEC-SSHHHHHHTBCSSCEEEECCCTT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHhCcCCCeEEe-CCHHHHHhhccCCCEEEEEccCc
Confidence 35899999999999999999999 99999999998877766543 44332 232 333 3599999998764
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0018 Score=57.47 Aligned_cols=67 Identities=15% Similarity=0.115 Sum_probs=50.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhh----hh------CCceeec-cCccccCCCCEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL----IN------MGITPSL-KWTEATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l----~~------~~i~~~~-~d~~~~~~~D~Vi~~a~ 151 (272)
++||.|+|+|.+|..++..|... |+ +|+.+++++++.+.. .. ....... .|.++++++|+||.+++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~--g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQK--NLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAG 81 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCHHHhCCCCEEEEeCC
Confidence 46999999999999999999999 88 999999987765421 11 1111221 34567899999999996
Q ss_pred C
Q 024143 152 P 152 (272)
Q Consensus 152 ~ 152 (272)
.
T Consensus 82 ~ 82 (322)
T 1t2d_A 82 F 82 (322)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0032 Score=56.02 Aligned_cols=70 Identities=17% Similarity=0.147 Sum_probs=50.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhh----hhhC-----CceeeccCccccCCCCEEEEecC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-----GITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~----l~~~-----~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
.++||.|+|+|.+|..++..|... +. +|+.+++++++.+. +... .+.....+.++++++|+||.+++
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~--~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag 85 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAG 85 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCC
Confidence 346999999999999999999888 65 89999997665432 2111 12222233467899999999998
Q ss_pred CCC
Q 024143 152 PSR 154 (272)
Q Consensus 152 ~~~ 154 (272)
...
T Consensus 86 ~~~ 88 (326)
T 2zqz_A 86 APQ 88 (326)
T ss_dssp CC-
T ss_pred CCC
Confidence 643
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0011 Score=59.25 Aligned_cols=68 Identities=19% Similarity=0.209 Sum_probs=52.9
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|... |++|++.+|.+.+. .....+++.. +. +.++++|+|+.+.+...
T Consensus 163 l~g~tvgIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~-~~~~~g~~~~--~l~ell~~aDvV~l~~P~t~ 231 (335)
T 2g76_A 163 LNGKTLGILGLGRIGREVATRMQSF--GMKTIGYDPIISPE-VSASFGVQQL--PLEEIWPLCDFITVHTPLLP 231 (335)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSSCHH-HHHHTTCEEC--CHHHHGGGCSEEEECCCCCT
T ss_pred CCcCEEEEEeECHHHHHHHHHHHHC--CCEEEEECCCcchh-hhhhcCceeC--CHHHHHhcCCEEEEecCCCH
Confidence 4557999999999999999999988 99999999986653 2334555432 32 56789999999888654
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0013 Score=60.08 Aligned_cols=70 Identities=10% Similarity=-0.000 Sum_probs=52.8
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
...++|.|+|.|.||+.+++.|... |++|++.+|++.+.......++.....-.+.+.++|+|+.+++..
T Consensus 189 l~gktvGIIGlG~IG~~vA~~l~a~--G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt 258 (393)
T 2nac_A 189 LEAMHVGTVAAGRIGLAVLRRLAPF--DVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLH 258 (393)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCC
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhC--CCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCc
Confidence 4567999999999999999999999 999999999865544333345543211125678999999888754
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00062 Score=61.60 Aligned_cols=96 Identities=14% Similarity=0.041 Sum_probs=59.6
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCcee--eccCc----cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITP--SLKWT----EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~--~~~d~----~~~~~~D~Vi~~a~~~~ 154 (272)
...++|+|+|+|.+|..+++.+... |++|++++|++++.+.+.. .+... ...+. +.+.++|+||+|++...
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPG 241 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence 4457999999999999999999999 9999999999877655433 33321 11121 24568999999998542
Q ss_pred -CC-ChHHHHHHHHHHhcCCCeEEEEecc
Q 024143 155 -SL-DYPGDVRLAALSWNGEGSFLFTSSS 181 (272)
Q Consensus 155 -~~-~~~~~~~~l~~~~~gvkr~V~~SS~ 181 (272)
.. .+. .+..+.....-..+|.+|+.
T Consensus 242 ~~~~~li--~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 242 AKAPKLV--TRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp ----CCS--CHHHHTTSCTTCEEEECC--
T ss_pred cccchhH--HHHHHHhhcCCCEEEEEecC
Confidence 11 110 12222111223578888864
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0018 Score=54.67 Aligned_cols=67 Identities=13% Similarity=0.096 Sum_probs=46.4
Q ss_pred cCCCeEEEEcC-----------------cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec-cCc------
Q 024143 82 VGENDLLIVGP-----------------GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-KWT------ 137 (272)
Q Consensus 82 ~~~~~IlItGa-----------------GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~-~d~------ 137 (272)
+..++|||||. |.+|..++++|.++ |++|+.+.+... ... ..+++... .+.
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~--Ga~V~l~~~~~~-l~~--~~g~~~~dv~~~~~~~~~ 80 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARR--GANVTLVSGPVS-LPT--PPFVKRVDVMTALEMEAA 80 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHT--TCEEEEEECSCC-CCC--CTTEEEEECCSHHHHHHH
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHC--CCEEEEEECCcc-ccc--CCCCeEEccCcHHHHHHH
Confidence 34578999965 89999999999999 999999887542 111 12333221 111
Q ss_pred --cccCCCCEEEEecCCC
Q 024143 138 --EATQKFPYVIFCAPPS 153 (272)
Q Consensus 138 --~~~~~~D~Vi~~a~~~ 153 (272)
+.+.++|++|++|+..
T Consensus 81 v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 81 VNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp HHHHGGGCSEEEECCBCC
T ss_pred HHHhcCCCCEEEECCccc
Confidence 1345799999999864
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0006 Score=61.15 Aligned_cols=68 Identities=19% Similarity=0.149 Sum_probs=48.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCC--CeEEEEecCCcchhh----hhhC-----CceeeccCc-cccCCCCEEEEe
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDE----LINM-----GITPSLKWT-EATQKFPYVIFC 149 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g--~~V~~~~R~~~~~~~----l~~~-----~i~~~~~d~-~~~~~~D~Vi~~ 149 (272)
.++||.|+|+ |++|+.++..+... | .+|+.+++.+++.+. +... .+. ...|. ++++++|+||++
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~--g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-~t~d~~~al~dADvVvit 83 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMM--RLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-FTSDIKEALTDAKYIVSS 83 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHT--TCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-EESCHHHHHTTEEEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhc--CCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-EcCCHHHHhCCCCEEEEc
Confidence 3579999997 99999999999988 6 589999998765432 2221 111 11233 468999999999
Q ss_pred cCCC
Q 024143 150 APPS 153 (272)
Q Consensus 150 a~~~ 153 (272)
++..
T Consensus 84 aG~p 87 (343)
T 3fi9_A 84 GGAP 87 (343)
T ss_dssp CC--
T ss_pred cCCC
Confidence 9854
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0056 Score=53.92 Aligned_cols=69 Identities=12% Similarity=0.046 Sum_probs=50.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC------Cceeec-cCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM------GITPSL-KWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~------~i~~~~-~d~~~~~~~D~Vi~~a~~~ 153 (272)
|||.|+|+|.+|..++..|.+...+++|+.+++++++.+.+. .. ...... .|.+.++++|+||.+++..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~l~~aDvViiav~~p 80 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAGLP 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEECCSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHHHCCCCEEEEeCCCC
Confidence 489999999999999999988522799999999987665432 10 111111 3444588999999999754
|
| >3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00041 Score=60.59 Aligned_cols=69 Identities=16% Similarity=0.125 Sum_probs=48.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCce--eeccCc-ccc-CCCCEEEEecCCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT--PSLKWT-EAT-QKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~--~~~~d~-~~~-~~~D~Vi~~a~~~~ 154 (272)
+|||+|+|+|-+|..++..|.+. |++|+.++|+++........+.. ....+. +.. ..+|+||.+..+..
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~~ 74 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQS--LPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQ 74 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHH--CTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGGG
T ss_pred CcEEEEECCCHHHHHHHHHHHHC--CCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCccC
Confidence 47999999999999999999999 99999999986654322112211 111122 333 68899999887653
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00066 Score=59.50 Aligned_cols=55 Identities=25% Similarity=0.211 Sum_probs=42.7
Q ss_pred CCeEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 84 ENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|++|.|+| +|.+|+.+++.|.+. |++|++.+|+++.. ..+++.++|+||.|.++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~~~~-------------~~~~~~~aDvVilavp~~ 76 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWAV-------------AESILANADVVIVSVPIN 76 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGGG-------------HHHHHTTCSEEEECSCGG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCcccC-------------HHHHhcCCCEEEEeCCHH
Confidence 46899999 999999999999999 99999999876421 113455677777777653
|
| >3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0033 Score=58.49 Aligned_cols=68 Identities=10% Similarity=0.098 Sum_probs=50.3
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchh--------hhhhCCc-e-----------eeccCccccCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--------ELINMGI-T-----------PSLKWTEATQK 142 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~--------~l~~~~i-~-----------~~~~d~~~~~~ 142 (272)
.++||.|+|+|.+|+.++..|.+. |++|++.++++++.. .+...+. . ....|.+++.+
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~al~~ 130 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLA--GIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHKLSN 130 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGGCTT
T ss_pred cCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHHHcc
Confidence 457999999999999999999999 999999999876321 1212221 0 11233456889
Q ss_pred CCEEEEecCC
Q 024143 143 FPYVIFCAPP 152 (272)
Q Consensus 143 ~D~Vi~~a~~ 152 (272)
+|+||-++..
T Consensus 131 aDlVIeAVpe 140 (460)
T 3k6j_A 131 CDLIVESVIE 140 (460)
T ss_dssp CSEEEECCCS
T ss_pred CCEEEEcCCC
Confidence 9999999875
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0022 Score=56.70 Aligned_cols=68 Identities=10% Similarity=0.024 Sum_probs=51.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhh----h------CCceeec-cCccccCCCCEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELI----N------MGITPSL-KWTEATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~----~------~~i~~~~-~d~~~~~~~D~Vi~~a~ 151 (272)
++||.|+|+|.+|..++..|... |+ +|+.+++++++.+... . ....... .|.++++++|+||.+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~--g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~a~~~aDiVi~avg 81 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKD--NLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDYADISGSDVVIITAS 81 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCHHHhCCCCEEEEeCC
Confidence 46899999999999999999999 98 9999999887654421 0 0111211 34467889999999997
Q ss_pred CC
Q 024143 152 PS 153 (272)
Q Consensus 152 ~~ 153 (272)
..
T Consensus 82 ~p 83 (317)
T 2ewd_A 82 IP 83 (317)
T ss_dssp CS
T ss_pred CC
Confidence 53
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0005 Score=60.42 Aligned_cols=70 Identities=11% Similarity=0.071 Sum_probs=52.3
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhC-Cc---eeecc-Cc-cccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM-GI---TPSLK-WT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~-~i---~~~~~-d~-~~~~~~D~Vi~~a~~~~ 154 (272)
..++++|+|+|-+|+.++..|.+. |+ +|++..|++++.+.+... +. ..... +. +.+.++|+||+|.+...
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~--G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLST--AAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT--TCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTC
T ss_pred CCCEEEEECcHHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCC
Confidence 457899999999999999999999 98 999999998776655432 21 22111 11 35678999999998654
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0013 Score=57.87 Aligned_cols=66 Identities=17% Similarity=0.107 Sum_probs=47.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhhh----hhC-----CceeeccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDEL----INM-----GITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~l----~~~-----~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
+||.|+|+|.+|..++..|... |+ +|+.+++++++.... ... .......+.++++++|+||.+++.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~--g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~ 77 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR--GSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGA 77 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC--
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCC
Confidence 4899999999999999999999 88 999999987644321 111 111211344678999999999964
|
| >2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00046 Score=60.44 Aligned_cols=70 Identities=13% Similarity=0.224 Sum_probs=51.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcC--C-C-CeEEEEecCCcchhhhhh-CCceeec-------------cCccccCCCCE
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEH--P-G-CQIYGQTMTADHHDELIN-MGITPSL-------------KWTEATQKFPY 145 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~--~-g-~~V~~~~R~~~~~~~l~~-~~i~~~~-------------~d~~~~~~~D~ 145 (272)
+|||.|+|+|.+|..++..|.+.+ + | ++|++++| +++.+.+.. .++.... .+.+...++|+
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDY 86 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCE
Confidence 368999999999999999998750 1 5 89999999 666666666 5655432 12234568999
Q ss_pred EEEecCCCC
Q 024143 146 VIFCAPPSR 154 (272)
Q Consensus 146 Vi~~a~~~~ 154 (272)
||.|..+..
T Consensus 87 vil~vk~~~ 95 (317)
T 2qyt_A 87 ILFCTKDYD 95 (317)
T ss_dssp EEECCSSSC
T ss_pred EEEecCccc
Confidence 999988654
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.001 Score=58.87 Aligned_cols=69 Identities=13% Similarity=0.108 Sum_probs=53.4
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
....++|.|+|.|.||+.+++.|... |++|++.+|++++. .....++... +. +.+.++|+|+.+.+...
T Consensus 139 ~l~g~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~-~~~~~g~~~~--~l~ell~~aDvVvl~~P~~~ 208 (313)
T 2ekl_A 139 ELAGKTIGIVGFGRIGTKVGIIANAM--GMKVLAYDILDIRE-KAEKINAKAV--SLEELLKNSDVISLHVTVSK 208 (313)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSCCHH-HHHHTTCEEC--CHHHHHHHCSEEEECCCCCT
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCCcchh-HHHhcCceec--CHHHHHhhCCEEEEeccCCh
Confidence 34567999999999999999999999 99999999987654 2334565532 32 46778999999887644
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0057 Score=54.12 Aligned_cols=69 Identities=13% Similarity=0.128 Sum_probs=49.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecC--Ccchhh----hhh------CCceee-ccCccccCCCCEEEEe
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMT--ADHHDE----LIN------MGITPS-LKWTEATQKFPYVIFC 149 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~--~~~~~~----l~~------~~i~~~-~~d~~~~~~~D~Vi~~ 149 (272)
++||.|+|+|.+|..++..|... |+ +|+.++++ +++.+. +.. ...... ..|.++++++|+||.+
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~--g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIia 85 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQK--ELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVIT 85 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEe
Confidence 46899999999999999999999 99 99999998 333321 111 111111 1244689999999999
Q ss_pred cCCCC
Q 024143 150 APPSR 154 (272)
Q Consensus 150 a~~~~ 154 (272)
++...
T Consensus 86 ag~p~ 90 (315)
T 3tl2_A 86 AGIAR 90 (315)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 98643
|
| >1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00063 Score=60.74 Aligned_cols=67 Identities=16% Similarity=0.183 Sum_probs=49.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCC-------CeEEEEecCCc-----chhhhhhCC--------c----eee-ccCc-
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPG-------CQIYGQTMTAD-----HHDELINMG--------I----TPS-LKWT- 137 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g-------~~V~~~~R~~~-----~~~~l~~~~--------i----~~~-~~d~- 137 (272)
++||.|+|+|.+|..++..|.+. | ++|++.+|+++ +.+.+...+ . ... ..+.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~--g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN--AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVV 85 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH--HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhc--CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHH
Confidence 36899999999999999999999 8 99999999877 555443211 0 011 1222
Q ss_pred cccCCCCEEEEecCC
Q 024143 138 EATQKFPYVIFCAPP 152 (272)
Q Consensus 138 ~~~~~~D~Vi~~a~~ 152 (272)
++..++|+||.|..+
T Consensus 86 ~~~~~aD~Vilav~~ 100 (354)
T 1x0v_A 86 QAAEDADILIFVVPH 100 (354)
T ss_dssp HHHTTCSEEEECCCG
T ss_pred HHHcCCCEEEEeCCH
Confidence 356789999999875
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00051 Score=59.80 Aligned_cols=68 Identities=15% Similarity=0.137 Sum_probs=50.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhCCceeeccC-c-cccCCCCEEEEecCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLKW-T-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~~i~~~~~d-~-~~~~~~D~Vi~~a~~~ 153 (272)
..++++|+|+|-+|+.++..|.+. |. +|++..|++++.+.+.. .+.....+ . +.+.++|+||++.+..
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~-~~~~~~~~~~~~~~~~aDiVInaTp~G 186 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKI--VRPTLTVANRTMSRFNNWSL-NINKINLSHAESHLDEFDIIINTTPAG 186 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTT--CCSCCEEECSCGGGGTTCCS-CCEEECHHHHHHTGGGCSEEEECCC--
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHH-hcccccHhhHHHHhcCCCEEEECccCC
Confidence 457899999999999999999999 98 99999999888766542 23322221 1 3467899999988753
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.01 E-value=5.7e-05 Score=78.98 Aligned_cols=61 Identities=13% Similarity=0.107 Sum_probs=50.1
Q ss_pred CcceeeecccCcccc-cccccccCCcchhhhcc-ccccccc--cccccceecccccccccccccc
Q 024143 1 MGTISCTNTVSLNGA-CTRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNFQV 61 (272)
Q Consensus 1 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 61 (272)
|+.||+.++..-.-. .++||++|||||+|-|| -++|+.+ +++...+|..+|...++..+..
T Consensus 977 l~~~~~~vL~~~~i~~~~~ff~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~~~ 1041 (1304)
T 2vsq_A 977 IAQIWSEVLGRKQIGIHDDFFALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKN 1041 (1304)
T ss_dssp HHHHHHHHHTCSCCCTTCCTTTTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCCCCHHHhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHh
Confidence 357899998642211 29999999999999999 9999987 8899999999999998876643
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.007 Score=53.89 Aligned_cols=70 Identities=14% Similarity=0.016 Sum_probs=51.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhh----hhhC-----Cceee-ccCccccCCCCEEEEec
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-----GITPS-LKWTEATQKFPYVIFCA 150 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~----l~~~-----~i~~~-~~d~~~~~~~D~Vi~~a 150 (272)
+++||.|+|+|.+|..++..|... |. +|+.+++++++.+. +... ..... ..|.+.++++|+||.++
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~--g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~~~daDiVIita 97 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK--DLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSVSAGSKLVVITA 97 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH--CCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCSCSSCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHHhCCCCEEEEeC
Confidence 457999999999999999999999 86 99999997765432 1111 11111 23445689999999999
Q ss_pred CCCC
Q 024143 151 PPSR 154 (272)
Q Consensus 151 ~~~~ 154 (272)
+...
T Consensus 98 G~p~ 101 (330)
T 3ldh_A 98 GARQ 101 (330)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 8643
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0017 Score=55.42 Aligned_cols=60 Identities=18% Similarity=0.240 Sum_probs=41.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEE-EecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYG-QTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~-~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~ 152 (272)
|+||.|+|+|.+|+.+++.+.++ ++++++ ++|++.. ..++..+ .|. +.. ++|+||+++.|
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~--~~eLva~~d~~~~~-----~~gv~v~-~dl~~l~-~~DVvIDft~p 64 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK--GHEIVGVIENTPKA-----TTPYQQY-QHIADVK-GADVAIDFSNP 64 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEECSSCC-------CCSCBC-SCTTTCT-TCSEEEECSCH
T ss_pred ceEEEEECcCHHHHHHHHHHHhC--CCEEEEEEecCccc-----cCCCcee-CCHHHHh-CCCEEEEeCCh
Confidence 68999999999999999999988 558776 4555442 1233322 222 234 88888887764
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0024 Score=56.50 Aligned_cols=70 Identities=13% Similarity=0.137 Sum_probs=50.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhhh----hhC------CceeeccCccccCCCCEEEEec
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDEL----INM------GITPSLKWTEATQKFPYVIFCA 150 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~l----~~~------~i~~~~~d~~~~~~~D~Vi~~a 150 (272)
.++||.|+|+|.+|..++..|... +. +|+.+++++++.... ... .+.....+.++++++|+||.++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~--~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~ 82 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQ--GIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICA 82 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC--CCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcC
Confidence 346999999999999999999888 54 899999987543321 110 1222222346789999999999
Q ss_pred CCCC
Q 024143 151 PPSR 154 (272)
Q Consensus 151 ~~~~ 154 (272)
+...
T Consensus 83 ~~~~ 86 (316)
T 1ldn_A 83 GANQ 86 (316)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 8644
|
| >3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0014 Score=58.48 Aligned_cols=65 Identities=18% Similarity=0.186 Sum_probs=50.6
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
....++|.|+|+|.+|+.+++.|... |++|++.+|++++.. ++... .+. ++++++|+|+.+.+..
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~--G~~V~~~dr~~~~~~-----g~~~~-~~l~ell~~aDvVil~vP~~ 226 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAF--DCPISYFSRSKKPNT-----NYTYY-GSVVELASNSDILVVACPLT 226 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCCTTC-----CSEEE-SCHHHHHHTCSEEEECSCCC
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCchhcc-----Cceec-CCHHHHHhcCCEEEEecCCC
Confidence 34567899999999999999999998 999999999876532 33322 222 4678999999998875
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0021 Score=57.26 Aligned_cols=68 Identities=13% Similarity=0.243 Sum_probs=55.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccc-cCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEA-TQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~-~~~~D~Vi~~a~~~ 153 (272)
..+|||+|+|-+|...++.+... |.+|+++++++++.+.+...|.+.+..+.+. .+++|+||.+++..
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~ 245 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTH 245 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcH
Confidence 36899999999999999988888 9999999999999888777777654433332 33899999998854
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0012 Score=59.19 Aligned_cols=67 Identities=12% Similarity=0.115 Sum_probs=38.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhc-CCCCeEEEEec--CCcchhhhhhCCceeeccCccccCCCCEEEEecC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTM--TADHHDELINMGITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~-~~g~~V~~~~R--~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
+||+|+|+ |++|+.+++.|.++ +|..+++++.. +..+.-.+....+.....+++.+.++|+||.|.+
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~~i~~~~~~~~~~~~~DvV~~a~g 77 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDFSSVGLAFFAAA 77 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCCGGGCSEEEECSC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCcceEEecCCHHHhcCCCEEEEcCC
Confidence 68999996 99999999999864 34456666642 2212111111111111112233557888887765
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0051 Score=54.47 Aligned_cols=67 Identities=16% Similarity=0.146 Sum_probs=49.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhh----hhh-----CCceeeccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN-----MGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~----l~~-----~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
+||.|+|+|.+|..++..|... +. +|+.+++++++.+. +.. ..+.....+.++++++|+||.+++..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~ 83 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ--GIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAP 83 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCC
Confidence 6899999999999999999988 65 89999997665442 111 12222223346899999999999864
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0012 Score=58.57 Aligned_cols=69 Identities=16% Similarity=0.102 Sum_probs=52.0
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEec-CCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|... |++|++.+| ++++. .....++... .+. +.+.++|+|+.+.+...
T Consensus 144 l~g~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~-~~~~~g~~~~-~~l~ell~~aDvVil~~p~~~ 214 (320)
T 1gdh_A 144 LDNKTLGIYGFGSIGQALAKRAQGF--DMDIDYFDTHRASSS-DEASYQATFH-DSLDSLLSVSQFFSLNAPSTP 214 (320)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCCHH-HHHHHTCEEC-SSHHHHHHHCSEEEECCCCCT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcChh-hhhhcCcEEc-CCHHHHHhhCCEEEEeccCch
Confidence 4557999999999999999999998 999999999 77653 2223455432 122 46778999999887643
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0012 Score=53.78 Aligned_cols=90 Identities=14% Similarity=0.168 Sum_probs=59.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceee--ccCcc-------cc--CCCCEEEEecC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS--LKWTE-------AT--QKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~--~~d~~-------~~--~~~D~Vi~~a~ 151 (272)
.++|+|+|+ |-+|..+++.+... |.+|++++|++++.+.+...+.... ..+.+ .. .++|+||++++
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 116 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA 116 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence 368999995 99999999999999 9999999998777665555554322 11211 11 36899999986
Q ss_pred CCCCCChHHHHHHHHHHhcCCCeEEEEecce
Q 024143 152 PSRSLDYPGDVRLAALSWNGEGSFLFTSSSA 182 (272)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~~gvkr~V~~SS~~ 182 (272)
. ..+...+.....-.++|.+++..
T Consensus 117 ~-------~~~~~~~~~l~~~G~~v~~g~~~ 140 (198)
T 1pqw_A 117 G-------EAIQRGVQILAPGGRFIELGKKD 140 (198)
T ss_dssp T-------HHHHHHHHTEEEEEEEEECSCGG
T ss_pred h-------HHHHHHHHHhccCCEEEEEcCCC
Confidence 3 12333332222235888887654
|
| >1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0012 Score=61.79 Aligned_cols=66 Identities=17% Similarity=0.226 Sum_probs=50.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-C-------ceeeccCc-ccc---CCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-G-------ITPSLKWT-EAT---QKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~-------i~~~~~d~-~~~---~~~D~Vi~~a~~ 152 (272)
|+|.|+|+|.+|+.++..|.+. |++|++.+|++++.+.+... + +.. ..+. +.. +++|+||.|.+.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~-~~~~~e~v~~l~~aDvVilaVp~ 78 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK--GFKVAVFNRTYSKSEEFMKANASAPFAGNLKA-FETMEAFAASLKKPRKALILVQA 78 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE-CSCHHHHHHHBCSSCEEEECCCC
T ss_pred CEEEEEChHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEE-ECCHHHHHhcccCCCEEEEecCC
Confidence 4799999999999999999999 99999999998877666542 3 221 1222 222 369999999886
Q ss_pred C
Q 024143 153 S 153 (272)
Q Consensus 153 ~ 153 (272)
.
T Consensus 79 ~ 79 (478)
T 1pgj_A 79 G 79 (478)
T ss_dssp S
T ss_pred h
Confidence 4
|
| >2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A | Back alignment and structure |
|---|
Probab=96.91 E-value=3.8e-05 Score=55.47 Aligned_cols=57 Identities=18% Similarity=-0.011 Sum_probs=43.6
Q ss_pred cceeeecccCcccc----cccccccCCcchhhhcc-ccccccc--cccccceeccccccccccc
Q 024143 2 GTISCTNTVSLNGA----CTRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATN 58 (272)
Q Consensus 2 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~ 58 (272)
..+|+.++.-.... .++||++|++|+++-++ -.+++.+ ++|...+|..++...++..
T Consensus 26 ~~~~~~~l~~~~~~~i~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~ 89 (95)
T 2ju1_A 26 RTSTATVLGHDDPKAVRATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGF 89 (95)
T ss_dssp HHHHHHHTTCCCGGGCCSSSCHHHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHH
T ss_pred HHHHHHHHCCCChhhCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHH
Confidence 35788877633222 18999999999999999 9999998 7788888988877665543
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00099 Score=59.96 Aligned_cols=69 Identities=14% Similarity=0.113 Sum_probs=42.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCC-----CCeEEEEecCC--cc-hhh----hhh-CCceeeccCccccCCCCEEEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHP-----GCQIYGQTMTA--DH-HDE----LIN-MGITPSLKWTEATQKFPYVIF 148 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~-----g~~V~~~~R~~--~~-~~~----l~~-~~i~~~~~d~~~~~~~D~Vi~ 148 (272)
.|+||.|+|+ |++|+.|++.|.++ + ..+|+.+.+.. .+ ... +.. ..+.....+.+.+.++|+||.
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~-~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~ 86 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGH-PAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAVFL 86 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTC-HHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHHHTTCSEEEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcC-CCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHHHhcCCCEEEE
Confidence 3579999996 99999999999877 3 35788776432 12 221 111 112211123234558888888
Q ss_pred ecCC
Q 024143 149 CAPP 152 (272)
Q Consensus 149 ~a~~ 152 (272)
|.+.
T Consensus 87 alg~ 90 (352)
T 2nqt_A 87 ALPH 90 (352)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 8764
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00088 Score=59.90 Aligned_cols=34 Identities=18% Similarity=0.357 Sum_probs=27.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcC-CCCeEEEEec
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEH-PGCQIYGQTM 117 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~-~g~~V~~~~R 117 (272)
|+||.|.|+ |++|+.+++.|.++. |..+++++..
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s 38 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLAS 38 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEEC
Confidence 579999995 999999999988752 4678887763
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0018 Score=58.54 Aligned_cols=69 Identities=17% Similarity=0.177 Sum_probs=51.9
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|..- |++|++.+|.... ......++.....+ +.+..+|+|+.+.+...
T Consensus 174 l~gktvGIIGlG~IG~~vA~~l~~f--G~~V~~~d~~~~~-~~~~~~g~~~~~l~-ell~~aDvV~l~~Plt~ 242 (365)
T 4hy3_A 174 IAGSEIGIVGFGDLGKALRRVLSGF--RARIRVFDPWLPR-SMLEENGVEPASLE-DVLTKSDFIFVVAAVTS 242 (365)
T ss_dssp SSSSEEEEECCSHHHHHHHHHHTTS--CCEEEEECSSSCH-HHHHHTTCEECCHH-HHHHSCSEEEECSCSSC
T ss_pred cCCCEEEEecCCcccHHHHHhhhhC--CCEEEEECCCCCH-HHHhhcCeeeCCHH-HHHhcCCEEEEcCcCCH
Confidence 4567999999999999999999988 9999999987533 22334565532111 56789999998887643
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0041 Score=48.24 Aligned_cols=87 Identities=15% Similarity=0.203 Sum_probs=56.5
Q ss_pred cCCCeEEEEcC----cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCCCCC
Q 024143 82 VGENDLLIVGP----GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLD 157 (272)
Q Consensus 82 ~~~~~IlItGa----GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~~~~ 157 (272)
+..++|.|+|+ |.+|..+++.|++. |++|+.+++..+.. .|+..+..-.+....+|+++.+.++..
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~--G~~V~~vnp~~~~i-----~G~~~~~s~~el~~~vDlvii~vp~~~--- 81 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNYDEI-----EGLKCYRSVRELPKDVDVIVFVVPPKV--- 81 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE-----TTEECBSSGGGSCTTCCEEEECSCHHH---
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHC--CCEEEEeCCCCCeE-----CCeeecCCHHHhCCCCCEEEEEeCHHH---
Confidence 34568999998 99999999999999 99988877654332 355444211134567999999887421
Q ss_pred hHHHHHHHHHHhcCCCeEEEEec
Q 024143 158 YPGDVRLAALSWNGEGSFLFTSS 180 (272)
Q Consensus 158 ~~~~~~~l~~~~~gvkr~V~~SS 180 (272)
..+.++.+. ..|++.++..++
T Consensus 82 v~~v~~~~~--~~g~~~i~~~~~ 102 (138)
T 1y81_A 82 GLQVAKEAV--EAGFKKLWFQPG 102 (138)
T ss_dssp HHHHHHHHH--HTTCCEEEECTT
T ss_pred HHHHHHHHH--HcCCCEEEEcCc
Confidence 222333332 357777666553
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0079 Score=52.68 Aligned_cols=70 Identities=16% Similarity=-0.010 Sum_probs=48.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhh----CC--ceee-ccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN----MG--ITPS-LKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~----~~--i~~~-~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|||.|+|+|.||+.++-.|..++---++..++..+++.+. |.. .+ .... ..|.+.++++|+||.+|+..
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~p 80 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCC
Confidence 6899999999999999999888212389999987654321 211 11 1111 13456899999999999965
Q ss_pred C
Q 024143 154 R 154 (272)
Q Consensus 154 ~ 154 (272)
+
T Consensus 81 r 81 (294)
T 2x0j_A 81 R 81 (294)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0031 Score=57.65 Aligned_cols=70 Identities=19% Similarity=0.260 Sum_probs=51.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhh-hCCceeecc-Cc-cccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELI-NMGITPSLK-WT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~-~~~i~~~~~-d~-~~~~~~D~Vi~~a~~~~ 154 (272)
..++|+|+|+|-+|+.+++.|... |. +|++.+|++++...+. ..+.+.+.. +. +.+.++|+||.+.+...
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~--G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~ 239 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDR--GVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPH 239 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSS
T ss_pred cCCEEEEEChHHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCC
Confidence 347899999999999999999999 98 9999999887654332 235443222 21 34578999999986543
|
| >3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0036 Score=58.66 Aligned_cols=68 Identities=22% Similarity=0.235 Sum_probs=51.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----------CCc-e-----------eeccCcccc
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----------MGI-T-----------PSLKWTEAT 140 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----------~~i-~-----------~~~~d~~~~ 140 (272)
++||.|+|+|.+|+.++..|.+. |++|++.+|++++.+.... .+. . ....|.+.+
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH--GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHAL 82 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHh
Confidence 46899999999999999999999 9999999999876654321 221 0 011233567
Q ss_pred CCCCEEEEecCCC
Q 024143 141 QKFPYVIFCAPPS 153 (272)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (272)
.++|+||-+....
T Consensus 83 ~~aDlVIeAVpe~ 95 (483)
T 3mog_A 83 AAADLVIEAASER 95 (483)
T ss_dssp GGCSEEEECCCCC
T ss_pred cCCCEEEEcCCCc
Confidence 8999999998653
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0015 Score=56.04 Aligned_cols=64 Identities=20% Similarity=0.259 Sum_probs=49.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
+|+|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+.. .+.. . .+. +. .++|+||.|.+...
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~--g~~v~v~~r~~~~~~~l~~~~~~~-~-~~~~~~-~~~Divi~~tp~~~ 183 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA--GLEVWVWNRTPQRALALAEEFGLR-A-VPLEKA-REARLLVNATRVGL 183 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHHTCE-E-CCGGGG-GGCSEEEECSSTTT
T ss_pred eEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhccc-h-hhHhhc-cCCCEEEEccCCCC
Confidence 899999999999999999999 8999999998776655432 2333 1 222 45 78999999998754
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0011 Score=58.97 Aligned_cols=68 Identities=22% Similarity=0.345 Sum_probs=50.5
Q ss_pred CcCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 81 ~~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
....++|.|+|.|.||+.+++.|..- |++|++.+|++...+.+.. .....+. +.++++|+|+.+.+..
T Consensus 134 ~l~gktvGIiGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~~---~~~~~~l~ell~~aDvV~l~lPlt 202 (324)
T 3evt_A 134 TLTGQQLLIYGTGQIGQSLAAKASAL--GMHVIGVNTTGHPADHFHE---TVAFTATADALATANFIVNALPLT 202 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSCCCCTTCSE---EEEGGGCHHHHHHCSEEEECCCCC
T ss_pred cccCCeEEEECcCHHHHHHHHHHHhC--CCEEEEECCCcchhHhHhh---ccccCCHHHHHhhCCEEEEcCCCc
Confidence 34568999999999999999999999 9999999998765432211 1111122 4677899999888754
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.002 Score=57.85 Aligned_cols=67 Identities=22% Similarity=0.147 Sum_probs=51.0
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
...++|.|+|.|.||+.+++.|..- |++|++.+|.+...... .+.... .+. +.++++|+|+.+.+..
T Consensus 171 l~gktvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~--~g~~~~-~~l~ell~~sDvV~l~~Plt 238 (345)
T 4g2n_A 171 LTGRRLGIFGMGRIGRAIATRARGF--GLAIHYHNRTRLSHALE--EGAIYH-DTLDSLLGASDIFLIAAPGR 238 (345)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHH--TTCEEC-SSHHHHHHTCSEEEECSCCC
T ss_pred cCCCEEEEEEeChhHHHHHHHHHHC--CCEEEEECCCCcchhhh--cCCeEe-CCHHHHHhhCCEEEEecCCC
Confidence 4557999999999999999999998 99999999986543322 244432 122 4678999999888754
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0014 Score=57.48 Aligned_cols=65 Identities=18% Similarity=0.201 Sum_probs=50.2
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|... |++|++.+|++.+.+. .+. ..+. +.++++|+|+.+.+...
T Consensus 120 l~g~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~-----~~~-~~~l~ell~~aDiV~l~~P~t~ 185 (290)
T 3gvx_A 120 LYGKALGILGYGGIGRRVAHLAKAF--GMRVIAYTRSSVDQNV-----DVI-SESPADLFRQSDFVLIAIPLTD 185 (290)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSCCCTTC-----SEE-CSSHHHHHHHCSEEEECCCCCT
T ss_pred eecchheeeccCchhHHHHHHHHhh--CcEEEEEecccccccc-----ccc-cCChHHHhhccCeEEEEeeccc
Confidence 4557999999999999999999999 9999999998765432 221 1122 46778999999888643
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0022 Score=57.91 Aligned_cols=68 Identities=10% Similarity=0.117 Sum_probs=50.5
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-CceeeccCcccc-CCCCEEEEecCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWTEAT-QKFPYVIFCAPP 152 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i~~~~~d~~~~-~~~D~Vi~~a~~ 152 (272)
+..++|+|+|+|.+|+++++.|.+. |++|++.++++++...+... +.+....+ +.+ ..+|+++-|+..
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~--GakVvv~D~~~~~l~~~a~~~ga~~v~~~-~ll~~~~DIvip~a~~ 240 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTE--GAKLVVTDVNKAAVSAAVAEEGADAVAPN-AIYGVTCDIFAPCALG 240 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCCEECCGG-GTTTCCCSEEEECSCS
T ss_pred CCcCEEEEECchHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHcCCEEEChH-HHhccCCcEeeccchH
Confidence 4557999999999999999999999 99999999887766544332 44433222 333 389999988744
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0011 Score=59.58 Aligned_cols=97 Identities=14% Similarity=0.065 Sum_probs=62.9
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCCCCC-hH
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRSLD-YP 159 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~~~~-~~ 159 (272)
...++|.|+|.|.||+.+++.|... |++|++.+|++.. ......+++.. .+. +.++++|+|+.+.+...... ..
T Consensus 158 l~g~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~-~~~~~~g~~~~-~~l~ell~~aDiV~l~~Plt~~t~~li 233 (352)
T 3gg9_A 158 LKGQTLGIFGYGKIGQLVAGYGRAF--GMNVLVWGRENSK-ERARADGFAVA-ESKDALFEQSDVLSVHLRLNDETRSII 233 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSHHHH-HHHHHTTCEEC-SSHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhC--CCEEEEECCCCCH-HHHHhcCceEe-CCHHHHHhhCCEEEEeccCcHHHHHhh
Confidence 4557999999999999999999999 9999999987532 22334566543 122 46788999998887654221 11
Q ss_pred HHHHHHHHHhcCCCeEEEEecceee
Q 024143 160 GDVRLAALSWNGEGSFLFTSSSAIY 184 (272)
Q Consensus 160 ~~~~~l~~~~~gvkr~V~~SS~~vY 184 (272)
. ...+.....-.-||.+|...+.
T Consensus 234 ~--~~~l~~mk~gailIN~aRg~~v 256 (352)
T 3gg9_A 234 T--VADLTRMKPTALFVNTSRAELV 256 (352)
T ss_dssp C--HHHHTTSCTTCEEEECSCGGGB
T ss_pred C--HHHHhhCCCCcEEEECCCchhh
Confidence 1 1122111223467777765553
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0025 Score=59.63 Aligned_cols=67 Identities=10% Similarity=0.098 Sum_probs=47.5
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
+..++++|+|+|-||+.+++.|... |.+|++.++++.+.......+.+....+ +....+|+|+.+.+
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~--GA~Viv~D~~~~~a~~Aa~~g~dv~~le-e~~~~aDvVi~atG 329 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQA--GARVIVTEIDPICALQATMEGLQVLTLE-DVVSEADIFVTTTG 329 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEECCGG-GTTTTCSEEEECSS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhCCccCCHH-HHHHhcCEEEeCCC
Confidence 3457899999999999999999999 9999999998766544333444322111 34556676665544
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0032 Score=55.98 Aligned_cols=66 Identities=18% Similarity=0.101 Sum_probs=49.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhh----hh------CCceeec-cCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL----IN------MGITPSL-KWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l----~~------~~i~~~~-~d~~~~~~~D~Vi~~a~~ 152 (272)
+||.|+|+|.+|..++..|... |+ +|+..++++++.+.. .. ....... .|.++++++|+||.+++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~--g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al~~aD~VI~avg~ 92 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK--DLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNYEYLQNSDVVIITAGV 92 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCHHHHCCCCEEEEcCCC
Confidence 5899999999999999999999 98 999999987765431 11 0111111 345678999999999964
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0011 Score=56.78 Aligned_cols=65 Identities=18% Similarity=0.109 Sum_probs=49.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhCCceeecc-Cc-cccCCCCEEEEecCCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLK-WT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~~i~~~~~-d~-~~~~~~D~Vi~~a~~~ 153 (272)
+++|+|+|-.|+.++..|.+. |. +|++..|++++.+.+... ...... +. +.+.++|+||++.+..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~--G~~~I~v~nR~~~ka~~la~~-~~~~~~~~~~~~~~~aDiVInatp~g 177 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM--GVKDIWVVNRTIERAKALDFP-VKIFSLDQLDEVVKKAKSLFNTTSVG 177 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCCEEEEESCHHHHHTCCSS-CEEEEGGGHHHHHHTCSEEEECSSTT
T ss_pred eEEEECcHHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHH-cccCCHHHHHhhhcCCCEEEECCCCC
Confidence 899999999999999999999 98 999999998877665432 221112 21 3467899999988653
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0021 Score=58.78 Aligned_cols=47 Identities=15% Similarity=0.350 Sum_probs=40.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCce
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT 131 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~ 131 (272)
...||+|+|+|-+|...++.+... |.+|++.++++.+.+.+...+..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~~G~~ 235 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVASLGAK 235 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHHTTCE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHcCCc
Confidence 457999999999999999999999 99999999998887766655554
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.001 Score=59.15 Aligned_cols=63 Identities=10% Similarity=-0.058 Sum_probs=53.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----ccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----~~~~~D~Vi~~a~ 151 (272)
++|+|.|+|.+|+.+++.|.++ |+ |+++++++++.+ +...++..+.+|. + .++++|.||.+.+
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~--g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS--EV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS--CE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred CCEEEECCcHHHHHHHHHHHhC--Cc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence 5799999999999999999999 99 999999998888 7777888887774 1 2668899887765
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0033 Score=57.11 Aligned_cols=49 Identities=18% Similarity=0.285 Sum_probs=40.6
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCcee
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP 132 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~ 132 (272)
...++|+|+|+|-+|..+++.+... |.+|++++|++.+.+.....+...
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~~~~~~~~~Ga~~ 218 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVESLGGKF 218 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHHTTCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeE
Confidence 3457999999999999999999999 999999999988776655555443
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0022 Score=55.83 Aligned_cols=70 Identities=16% Similarity=0.173 Sum_probs=51.4
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhC-----CceeeccCccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM-----GITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~-----~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
...++++|+|+|-+|+.++..|.+. |. +|++..|++++.+.+... .+.....+ +...++|+||++.+...
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~-~l~~~aDiIInaTp~gm 199 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQ--QPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE-QLKQSYDVIINSTSASL 199 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--CCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG-GCCSCEEEEEECSCCCC
T ss_pred ccCCEEEEECchHHHHHHHHHHHhc--CCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH-HhcCCCCEEEEcCcCCC
Confidence 3457899999999999999999999 96 999999998776654321 12222222 23368999999887643
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0016 Score=61.24 Aligned_cols=67 Identities=19% Similarity=0.207 Sum_probs=52.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
..++|+|+|+|.||..+++.+... |.+|++.++++.+.......|.+....+ +.+.++|+||.+.+.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~-e~l~~aDvVi~atgt 339 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMMEGFDVVTVE-EAIGDADIVVTATGN 339 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEECCHH-HHGGGCSEEEECSSS
T ss_pred CcCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCEEecHH-HHHhCCCEEEECCCC
Confidence 447899999999999999999999 9999999998877554445666532111 457789999988754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 272 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.95 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.95 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.95 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.94 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.94 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.92 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.92 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.92 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.91 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.91 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.91 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.9 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.9 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.89 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.89 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.88 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.88 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.88 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.87 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.87 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.85 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.85 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.83 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.82 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.8 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.8 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.79 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.76 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.76 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.56 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.07 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.04 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.04 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.03 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.97 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.97 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.97 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.96 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.94 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.94 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 98.93 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.89 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.89 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.89 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.88 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.85 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.85 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.84 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.83 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.83 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.8 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.8 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.79 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.79 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.76 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.76 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.76 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.75 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 98.74 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.74 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.73 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.69 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.65 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.65 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.65 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.64 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.64 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 98.61 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.61 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.6 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.59 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.58 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.57 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.55 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.55 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.53 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.52 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.52 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.51 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 98.5 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 98.5 | |
| d2gdwa1 | 76 | Peptidyl carrier protein (PCP), thioester domain { | 98.42 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.4 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.39 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.31 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.3 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.3 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.29 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.23 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 98.23 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 98.17 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 98.16 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 98.13 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.12 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 98.08 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.04 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.02 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.02 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 98.0 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 97.95 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.95 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.94 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.93 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.93 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 97.91 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 97.89 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 97.88 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.88 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 97.85 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.83 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 97.77 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.72 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.71 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.69 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.63 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.6 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.6 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.57 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.56 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.54 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.53 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 97.5 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.5 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.49 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.47 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 97.44 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.36 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.31 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.31 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 97.3 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 97.29 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.28 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 97.28 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.27 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.25 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 97.21 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 97.18 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.15 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 97.13 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.12 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 97.12 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.11 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.08 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.06 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.06 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.05 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 97.0 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.99 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.99 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.98 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.97 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.92 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 96.89 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 96.86 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.86 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.86 | |
| d2pnga1 | 76 | Type I fatty acid synthase ACP domain {Rat (Rattus | 96.79 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.78 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.76 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 96.75 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.73 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.73 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.69 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.69 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 96.68 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.66 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 96.66 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 96.61 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 96.58 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 96.58 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.57 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.56 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.51 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 96.51 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.48 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 96.47 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.43 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 96.43 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 96.43 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 96.4 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 96.4 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 96.39 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 96.36 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 96.36 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 96.36 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 96.33 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 96.31 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.28 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 96.28 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 96.26 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 96.26 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.25 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 96.22 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 96.21 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 96.21 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 96.15 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.15 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.13 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 96.1 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 96.04 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 96.04 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 96.02 | |
| d2jq4a1 | 83 | Hypothetical protein Atu2571 {Agrobacterium tumefa | 96.01 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 95.96 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 95.95 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 95.95 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 95.93 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 95.93 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 95.91 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 95.89 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.88 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 95.85 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 95.84 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 95.8 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 95.79 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.75 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 95.74 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.7 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 95.65 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 95.64 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 95.63 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 95.62 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 95.62 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 95.61 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 95.59 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 95.55 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 95.54 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 95.48 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 95.45 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 95.44 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 95.4 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 95.36 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.33 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 95.31 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.28 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 95.24 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 95.17 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 95.06 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 94.96 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 94.88 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 94.87 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 94.81 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 94.78 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 94.68 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 94.58 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 94.54 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 94.53 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.28 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 94.13 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 94.11 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 94.04 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 93.93 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 93.91 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 93.87 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 93.83 | |
| d2af8a_ | 86 | Actinorhodin polyketide synthase acyl carrier prot | 93.8 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 93.76 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 93.62 | |
| d1vkua_ | 85 | Acyl carrier protein {Thermotoga maritima [TaxId: | 93.61 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 93.57 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 93.49 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 93.36 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 93.34 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 93.34 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 93.34 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 93.28 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 93.2 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 92.98 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 92.92 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 92.85 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 92.82 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 92.79 | |
| d1dv5a_ | 80 | apo-D-alanyl carrier protein {Lactobacillus casei | 92.65 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 92.53 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 92.35 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 92.31 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 92.24 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 92.09 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 91.89 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 91.83 | |
| d1nq4a_ | 95 | Oxytetracycline polyketide synthase acyl carrier { | 91.53 | |
| d1or5a_ | 82 | Frenolicin polyketide synthase acyl carrier protei | 91.48 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 91.46 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 91.31 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 91.05 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 90.77 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 90.64 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 90.57 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 90.47 | |
| d1klpa_ | 115 | Acyl carrier protein {Mycobacterium tuberculosis [ | 90.4 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 90.21 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 90.2 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 90.19 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 89.54 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 89.31 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 89.06 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 88.88 | |
| d1m6ia1 | 213 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 88.55 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 88.15 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 88.06 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 87.76 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 87.59 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 87.43 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 87.4 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 87.26 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 87.05 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 86.96 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 86.89 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 86.79 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 86.77 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 86.62 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 86.47 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 86.37 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 85.98 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 85.58 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.44 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 85.25 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 84.21 | |
| d1qmga2 | 226 | Class II ketol-acid reductoisomerase (KARI) {Spina | 83.98 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 83.64 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 83.32 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 83.25 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 82.87 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 82.32 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 81.45 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 81.37 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 81.33 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 80.43 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=1.3e-27 Score=215.14 Aligned_cols=183 Identities=18% Similarity=0.134 Sum_probs=131.3
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-----chhhh------hhCCceeeccCc---c----ccC--CC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-----HHDEL------INMGITPSLKWT---E----ATQ--KF 143 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-----~~~~l------~~~~i~~~~~d~---~----~~~--~~ 143 (272)
|++||||+ ||||++|+++|+++ |++|++++|... +...+ ....++.+.+|. + .++ ++
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP 79 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCC
Confidence 67899996 99999999999999 999999999543 21111 112445555553 1 233 67
Q ss_pred CEEEEecCCCCCC----C---h----HHHHHHHHH--Hhc---CCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 144 PYVIFCAPPSRSL----D---Y----PGDVRLAAL--SWN---GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 144 D~Vi~~a~~~~~~----~---~----~~~~~~l~~--~~~---gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
|+|||+|+..... + + ..++.+++. ... +++||||+||..|||.....+++|++|+.|. ++|+
T Consensus 80 d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~--~~Y~ 157 (357)
T d1db3a_ 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR--SPYA 157 (357)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCC--SHHH
T ss_pred CEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCC--ChHH
Confidence 9999999874421 1 1 223445542 223 3458999999999998767799999999887 8999
Q ss_pred HHHHHHHHHHHHc----C--eeEEeeCceecCCCcH------H---HHHHHcCcc----cCCCCcccccccHHHHHHHHH
Q 024143 208 DVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------H---VYWLQKGTV----DSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 208 ~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~------~---~~~l~~g~~----~~~~~~~~~~I~v~Dva~ai~ 268 (272)
.+|+.+|++++.+ + ++++||+++|||+... + ..++..+.. ++++++.++|+|++|+|++++
T Consensus 158 ~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~ 237 (357)
T d1db3a_ 158 VAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 237 (357)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHH
Confidence 9999999999875 3 8999999999996431 1 112333332 378899999999999999998
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
.++
T Consensus 238 ~~~ 240 (357)
T d1db3a_ 238 MML 240 (357)
T ss_dssp HTT
T ss_pred HHH
Confidence 876
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.5e-27 Score=211.07 Aligned_cols=183 Identities=13% Similarity=0.093 Sum_probs=129.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-cchhhhhh----CCceeeccCc--cccCCCCEEEEecCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELIN----MGITPSLKWT--EATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~~~l~~----~~i~~~~~d~--~~~~~~D~Vi~~a~~~~~ 155 (272)
+|||||||+ ||||++|+++|+++ |++|++++|.. .....+.. ..++....|. ..+.++|+|||+|+....
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~ 78 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASP 78 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEECcccCCc
Confidence 379999996 99999999999999 99999998742 22222211 1122222222 245689999999986442
Q ss_pred ----CC---h----HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCC-----CCCCCCCCChHHHHHHHHHHHH
Q 024143 156 ----LD---Y----PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDED-----SPVVPIGRSPRTDVLLKAEKVI 217 (272)
Q Consensus 156 ----~~---~----~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~-----~p~~p~~~~~y~~sk~~aE~~l 217 (272)
.+ + +..+.+++. ...++ |+||+||..||+.....+++|+ +|..|. ++|+.+|.++|.++
T Consensus 79 ~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~--~~Y~~sK~~~E~~~ 155 (312)
T d2b69a1 79 PNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPR--ACYDEGKRVAETMC 155 (312)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTT--HHHHHHHHHHHHHH
T ss_pred hhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCc--cHHHHHHHHHHHHH
Confidence 11 1 223344442 23344 8999999999997655566655 455665 79999999999999
Q ss_pred HHc----C--eeEEeeCceecCCCcH--------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 218 LEF----G--GCVLRLAGLYKADRGA--------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 218 ~~~----~--~~IlRp~~iyG~~~~~--------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+ + ++++||+++|||+... +...+..|+. +++|++.++|||++|++++++.++
T Consensus 156 ~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~ 226 (312)
T d2b69a1 156 YAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM 226 (312)
T ss_dssp HHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHH
Confidence 764 3 7999999999987431 2233455654 378899999999999999998876
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.95 E-value=3.4e-27 Score=209.15 Aligned_cols=183 Identities=16% Similarity=0.136 Sum_probs=134.9
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEE------EecC--Ccc---hhhhh-hCCceeeccCc-------cccCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYG------QTMT--ADH---HDELI-NMGITPSLKWT-------EATQKFP 144 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~------~~R~--~~~---~~~l~-~~~i~~~~~d~-------~~~~~~D 144 (272)
|||||||+ ||||++|+++|+++ |++|.+ +++. ... ...+. ...++.+..|. .....+|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~--g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d 78 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAG--AYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVD 78 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--SCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccc
Confidence 58999996 99999999999999 886544 3332 111 11111 12455555553 2467999
Q ss_pred EEEEecCCCCCC----Ch-------HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHH
Q 024143 145 YVIFCAPPSRSL----DY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLL 211 (272)
Q Consensus 145 ~Vi~~a~~~~~~----~~-------~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~ 211 (272)
.|+|+|+..... .. ...+.+++. ...++++|||+||+.+||.....+++|++|..|. ++||.+|.
T Consensus 79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~--~~Y~~sK~ 156 (322)
T d1r6da_ 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPN--SPYAASKA 156 (322)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCC--SHHHHHHH
T ss_pred eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCC--CHHHHHHH
Confidence 999999875421 11 122334442 3467999999999999998777789999999987 89999999
Q ss_pred HHHHHHHHc----C--eeEEeeCceecCCCcH------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 212 KAEKVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 212 ~aE~~l~~~----~--~~IlRp~~iyG~~~~~------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.+|.+++.+ + ++++||+++|||+... +..++.+|++ .++|++.++|+|++|+|+++..++
T Consensus 157 ~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~ 231 (322)
T d1r6da_ 157 GSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVL 231 (322)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHH
Confidence 999998765 3 8999999999997542 2234555654 378899999999999999999876
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.94 E-value=3.5e-26 Score=203.95 Aligned_cols=185 Identities=18% Similarity=0.112 Sum_probs=138.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-ch---hhh-------hhCCceeeccCc-------cccCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HH---DEL-------INMGITPSLKWT-------EATQKF 143 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-~~---~~l-------~~~~i~~~~~d~-------~~~~~~ 143 (272)
.+|+|||||+ ||||++|+++|+++ ||+|++++|... .. ..+ ....++.+.+|. ......
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~ 92 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 92 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccc
Confidence 4579999996 99999999999999 999999987432 11 111 112345555553 145688
Q ss_pred CEEEEecCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHH
Q 024143 144 PYVIFCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (272)
Q Consensus 144 D~Vi~~a~~~~~~----~-------~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk 210 (272)
+.|+|+++..... + .+....+++ ....++++|||+||..|||.....+++|++|..|. +.|+.+|
T Consensus 93 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK 170 (341)
T d1sb8a_ 93 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPL--SPYAVTK 170 (341)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC--SHHHHHH
T ss_pred cccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCC--CcchHHH
Confidence 9999999865421 1 123334444 24567999999999999998777889999999987 8999999
Q ss_pred HHHHHHHHHcC------eeEEeeCceecCCCc------H----HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 211 LKAEKVILEFG------GCVLRLAGLYKADRG------A----HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 211 ~~aE~~l~~~~------~~IlRp~~iyG~~~~------~----~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..+|++++.+. ++|+||+++||++.. . +...+..|++ .++|++.++|+|++|+|+++..++
T Consensus 171 ~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~ 250 (341)
T d1sb8a_ 171 YVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA 250 (341)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhh
Confidence 99999987642 899999999998642 1 1123455654 478899999999999999987765
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=5.7e-26 Score=202.39 Aligned_cols=183 Identities=17% Similarity=0.077 Sum_probs=131.6
Q ss_pred CeE-EEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-----hhhhh-------hCCceeeccCc---c----c--cC
Q 024143 85 NDL-LIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI-------NMGITPSLKWT---E----A--TQ 141 (272)
Q Consensus 85 ~~I-lItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-----~~~l~-------~~~i~~~~~d~---~----~--~~ 141 (272)
||| ||||+ ||||++|+++|+++ ||+|++++|.+.. .+.+. ...++.+.+|. + + -.
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~--g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 78 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV 78 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc
Confidence 578 99996 99999999999999 9999999996432 12111 12345555553 1 2 23
Q ss_pred CCCEEEEecCCCCCC----C---h----HHHHHHHHH--HhcC---CCeEEEEecceeecCCCCCCCCCCCCCCCCCCCh
Q 024143 142 KFPYVIFCAPPSRSL----D---Y----PGDVRLAAL--SWNG---EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~----~---~----~~~~~~l~~--~~~g---vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~ 205 (272)
++++|+|+++..... + + ...+.+++. ...+ .++|||+||..|||.....+++|++|+.|. ++
T Consensus 79 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~--~~ 156 (347)
T d1t2aa_ 79 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPR--SP 156 (347)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCC--SH
T ss_pred ccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCC--CH
Confidence 788999999865421 1 1 112233331 2333 458999999999998767789999999887 89
Q ss_pred HHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH------HH----HHHHcCc-c--cCCCCcccccccHHHHHHH
Q 024143 206 RTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------HV----YWLQKGT-V--DSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 206 y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~------~~----~~l~~g~-~--~~~~~~~~~~I~v~Dva~a 266 (272)
||.+|.++|++++.+ + ++++||+++|||.... .. ..+..+. + .+++++.++|+|++|++++
T Consensus 157 Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a 236 (347)
T d1t2aa_ 157 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEA 236 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHH
Confidence 999999999999875 3 7999999999996431 11 1122222 2 4788999999999999999
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
+..++
T Consensus 237 ~~~~~ 241 (347)
T d1t2aa_ 237 MWLML 241 (347)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98875
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.92 E-value=8.6e-25 Score=196.29 Aligned_cols=184 Identities=14% Similarity=0.064 Sum_probs=130.5
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~~ 155 (272)
.|||||||+ ||||++|+++|+++ ||+|++++|.............+....|. +.++++|+|||+|+....
T Consensus 15 nMKILVTGgsGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~ 92 (363)
T d2c5aa1 15 NLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGG 92 (363)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeeccccccc
Confidence 478999996 99999999999999 99999998764432221223344444443 246799999999976542
Q ss_pred -----CC-------hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCC-------CCCCCCCCCCCCChHHHHHHHHH
Q 024143 156 -----LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGA-------CDEDSPVVPIGRSPRTDVLLKAE 214 (272)
Q Consensus 156 -----~~-------~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~-------~~E~~p~~p~~~~~y~~sk~~aE 214 (272)
.. ......+++ ....+++||||+||..+|+.....+ .+|.+|..|. ++||.+|.++|
T Consensus 93 ~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~--~~Yg~sK~~~E 170 (363)
T d2c5aa1 93 MGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ--DAFGLEKLATE 170 (363)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCS--SHHHHHHHHHH
T ss_pred ccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCC--CHHHHHHHHHH
Confidence 11 112223333 2467899999999999998643333 3345566676 89999999999
Q ss_pred HHHHHc----C--eeEEeeCceecCCCc-------HHHHH----HHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 215 KVILEF----G--GCVLRLAGLYKADRG-------AHVYW----LQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 215 ~~l~~~----~--~~IlRp~~iyG~~~~-------~~~~~----l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++++++ + ++++||+++||++.. ..... ...... +++|.+.++|||++|++++++.++
T Consensus 171 ~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~ 247 (363)
T d2c5aa1 171 ELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 247 (363)
T ss_dssp HHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHH
Confidence 998864 3 899999999998642 11111 112221 477889999999999999988765
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.92 E-value=1.2e-24 Score=194.32 Aligned_cols=185 Identities=10% Similarity=0.105 Sum_probs=130.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-------cchhhhhhCCceeeccCc-------cccCCCCEEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-------DHHDELINMGITPSLKWT-------EATQKFPYVI 147 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-------~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi 147 (272)
.||||||||+ ||||++|+++|+++ |++|.++.++. .....+...+++.+.+|. .++.+.|.|+
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~--g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~ 78 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNN--HPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIV 78 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHH--CTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHC--CCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhh
Confidence 3899999996 99999999999999 88766554421 112223334566666664 2567899999
Q ss_pred EecCCCCCC----C---h----HHHHHHHHH-HhcCCCeEEEEecceeecCC------------CCCCCCCCCCCCCCCC
Q 024143 148 FCAPPSRSL----D---Y----PGDVRLAAL-SWNGEGSFLFTSSSAIYDCS------------DNGACDEDSPVVPIGR 203 (272)
Q Consensus 148 ~~a~~~~~~----~---~----~~~~~~l~~-~~~gvkr~V~~SS~~vYg~~------------~~~~~~E~~p~~p~~~ 203 (272)
|+|+..... + + ...+.+++. +.....++|++||..+||.. .....+|+++..|.
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~-- 156 (346)
T d1oc2a_ 79 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS-- 156 (346)
T ss_dssp ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC--
T ss_pred hhhhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCC--
Confidence 999875421 1 1 122334442 22223689999999999741 12356778888787
Q ss_pred ChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCc---HH---HHHHHcCcc---cCCCCcccccccHHHHHHHHH
Q 024143 204 SPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG---AH---VYWLQKGTV---DSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~---~~---~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~ 268 (272)
+.||.+|+++|++++.+ + ++++||+++|||... .+ ..++..+.. ++++++.++|||++|+|++++
T Consensus 157 s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~ 236 (346)
T d1oc2a_ 157 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVW 236 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHH
Confidence 89999999999998764 3 799999999998643 11 223344443 478999999999999999998
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
.++
T Consensus 237 ~~~ 239 (346)
T d1oc2a_ 237 AIL 239 (346)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.92 E-value=1.1e-24 Score=196.37 Aligned_cols=183 Identities=14% Similarity=0.083 Sum_probs=126.7
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEE-EecCC--cchhhhh----hCCceeeccCc---c----cc--CCCCEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYG-QTMTA--DHHDELI----NMGITPSLKWT---E----AT--QKFPYVI 147 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~-~~R~~--~~~~~l~----~~~i~~~~~d~---~----~~--~~~D~Vi 147 (272)
|||||||+ ||||++|+++|+++ |++|++ +++.. .....+. ..+++...+|. + .+ .++|+||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~--g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKN--TQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVM 78 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHH--CSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 58999996 99999999999999 998654 44421 1111111 12456655553 1 22 2689999
Q ss_pred EecCCCCCC----C---h----HHHHHHHHH-H----------hcCCCeEEEEecceeecCCCCC----------CCCCC
Q 024143 148 FCAPPSRSL----D---Y----PGDVRLAAL-S----------WNGEGSFLFTSSSAIYDCSDNG----------ACDED 195 (272)
Q Consensus 148 ~~a~~~~~~----~---~----~~~~~~l~~-~----------~~gvkr~V~~SS~~vYg~~~~~----------~~~E~ 195 (272)
|||+..... + + ...+.+++. + ..++++|||+||..|||..... ...|.
T Consensus 79 hlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~ 158 (361)
T d1kewa_ 79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET 158 (361)
T ss_dssp ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred ECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccC
Confidence 999975421 1 1 112233331 1 1246799999999999864322 23456
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCc------HHHHHHHcCcc---cCCCCcccccccH
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG------AHVYWLQKGTV---DSRPDHILNLIHY 260 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~------~~~~~l~~g~~---~~~~~~~~~~I~v 260 (272)
++..|. +.||.+|.++|++++.+ + ++++||+++|||+.. .+...+.+|++ .++|++.++|+|+
T Consensus 159 ~~~~p~--s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v 236 (361)
T d1kewa_ 159 TAYAPS--SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236 (361)
T ss_dssp SCCCCC--SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEH
T ss_pred CCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEH
Confidence 666676 89999999999999874 3 799999999999753 12234555664 3788999999999
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|++++.++
T Consensus 237 ~D~a~ai~~~~ 247 (361)
T d1kewa_ 237 EDHARALHMVV 247 (361)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999876
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.91 E-value=6.4e-24 Score=188.16 Aligned_cols=184 Identities=14% Similarity=0.059 Sum_probs=128.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-----hhhh-------hhCCceeeccCc---c----c--cC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDEL-------INMGITPSLKWT---E----A--TQ 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-----~~~l-------~~~~i~~~~~d~---~----~--~~ 141 (272)
+|++||||+ ||||++|+++|+++ ||+|++++|..+. ...+ ....++...+|. + . ..
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 78 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI 78 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHC--cCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh
Confidence 378999997 99999999999999 9999999996432 1111 112233444553 1 1 24
Q ss_pred CCCEEEEecCCCCCC----C----h---HHHHHHHH----H---HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSL----D----Y---PGDVRLAA----L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~----~----~---~~~~~~l~----~---~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
++|+|||+|+..... + + ...+.+++ . +.....++++.||..+|+.. ..+++|++|..|.
T Consensus 79 ~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~~~~E~~~~~p~-- 155 (339)
T d1n7ha_ 79 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSETTPFHPR-- 155 (339)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CSSBCTTSCCCCC--
T ss_pred ccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CCCCCCCCCCCCc--
Confidence 789999999975421 1 0 11112221 1 12345678888888888764 4678999999887
Q ss_pred ChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH------HHH---HHHcC-c-c--cCCCCcccccccHHHHH
Q 024143 204 SPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------HVY---WLQKG-T-V--DSRPDHILNLIHYEVNT 264 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~------~~~---~l~~g-~-~--~~~~~~~~~~I~v~Dva 264 (272)
+.|+.+|+.+|+++..+ + ++++||+++|||.... +.. ....+ . . .+++.+.++|+|++|+|
T Consensus 156 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a 235 (339)
T d1n7ha_ 156 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYV 235 (339)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHH
Confidence 89999999999998764 3 7999999999996431 111 12222 2 2 36788999999999999
Q ss_pred HHHHHHhC
Q 024143 265 LVLFIAST 272 (272)
Q Consensus 265 ~ai~~a~~ 272 (272)
+++..++.
T Consensus 236 ~~~~~~~~ 243 (339)
T d1n7ha_ 236 EAMWLMLQ 243 (339)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99998763
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.91 E-value=6e-24 Score=187.15 Aligned_cols=183 Identities=16% Similarity=0.059 Sum_probs=132.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc--hhhhhh----CCceeeccCc---c------ccCCCCEEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELIN----MGITPSLKWT---E------ATQKFPYVIF 148 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~--~~~l~~----~~i~~~~~d~---~------~~~~~D~Vi~ 148 (272)
|+|||||+ ||||++|+++|+++ ||+|++++|.... ...+.. .+++....|. + .....++++|
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~ 78 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN 78 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccc
Confidence 58999996 99999999999999 9999999996432 233322 2344555553 1 1235778888
Q ss_pred ecCCCCC----CCh-------HHHHHHHHH--HhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 024143 149 CAPPSRS----LDY-------PGDVRLAAL--SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (272)
Q Consensus 149 ~a~~~~~----~~~-------~~~~~~l~~--~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE 214 (272)
++..... .+. ...+.+++. ...+ .++|++.||..+|+.....+.+|++|..|. ++|+.+|.++|
T Consensus 79 ~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~--~~Y~~sK~~~E 156 (321)
T d1rpna_ 79 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR--SPYGVAKLYGH 156 (321)
T ss_dssp CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHHH
T ss_pred ccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCcccc--ChhHHHHHHHH
Confidence 8876432 111 122334442 2345 568999999999988767788999999887 89999999999
Q ss_pred HHHHHc----C--eeEEeeCceecCCCc-H-----HH---HHHHcCc--c--cCCCCcccccccHHHHHHHHHHHh
Q 024143 215 KVILEF----G--GCVLRLAGLYKADRG-A-----HV---YWLQKGT--V--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 215 ~~l~~~----~--~~IlRp~~iyG~~~~-~-----~~---~~l~~g~--~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++++++ + .+++||+++|||... . +. .++..+. . +++|++.++|+|++|+|++++.++
T Consensus 157 ~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~ 232 (321)
T d1rpna_ 157 WITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLML 232 (321)
T ss_dssp HHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHH
Confidence 998765 3 799999999999632 1 11 1223332 2 478899999999999999999876
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=8.8e-24 Score=175.76 Aligned_cols=172 Identities=13% Similarity=0.011 Sum_probs=131.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~~~ 154 (272)
.|+||+|+|+ |+||++++++|+++ ||+|++++|++++.+.....+++.+.+|. ++++++|+|||+++...
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~ 79 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN 79 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccCC
Confidence 5789999996 99999999999999 99999999998887666566788887774 26889999999998754
Q ss_pred CCC----hHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEe
Q 024143 155 SLD----YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLR 226 (272)
Q Consensus 155 ~~~----~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlR 226 (272)
... +.+..++++ +...+++|||++||.++|++... . +.....|...|..+|+.+++.+ +||+|
T Consensus 80 ~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~------~---~~~~~~~~~~~~~~e~~l~~~~~~~tiir 150 (205)
T d1hdoa_ 80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK------V---PPRLQAVTDDHIRMHKVLRESGLKYVAVM 150 (205)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC------S---CGGGHHHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred chhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcc------c---cccccccchHHHHHHHHHHhcCCceEEEe
Confidence 321 344445554 35678999999999998865321 1 1111468889999999999988 89999
Q ss_pred eCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 227 LAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 227 p~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|+.+++..... ......++.....+|+++|+|++++.++
T Consensus 151 p~~~~~~~~~~------~~~~~~~~~~~~~~i~~~DvA~~~~~~l 189 (205)
T d1hdoa_ 151 PPHIGDQPLTG------AYTVTLDGRGPSRVISKHDLGHFMLRCL 189 (205)
T ss_dssp CSEEECCCCCS------CCEEESSSCSSCSEEEHHHHHHHHHHTT
T ss_pred cceecCCCCcc------cEEEeeCCCCCCCcCCHHHHHHHHHHHh
Confidence 99998754310 1112345666778999999999999876
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=4.6e-24 Score=187.57 Aligned_cols=181 Identities=15% Similarity=0.090 Sum_probs=123.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCCCC-----C
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSL-----D 157 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~~~-----~ 157 (272)
++||||||+ ||||++|+++|+++ |+.|+++++..+ .+......+..+ -....+|.|+|+|+..... +
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~--g~~vi~~~~~~~-~~~~~~~~~~~~----~~~~~~d~v~~~a~~~~~~~~~~~~ 74 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRDE-LNLLDSRAVHDF----FASERIDQVYLAAAKVGGIVANNTY 74 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTTT-CCTTCHHHHHHH----HHHHCCSEEEECCCCCCCHHHHHHC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--cCEEEEecCchh-ccccCHHHHHHH----HhhcCCCEEEEcchhccccccchhh
Confidence 468999996 99999999999999 999987765322 110000000000 0123689999999764321 1
Q ss_pred ---h----HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC---CChHHHHHHHHHHHHHHc----C
Q 024143 158 ---Y----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG---RSPRTDVLLKAEKVILEF----G 221 (272)
Q Consensus 158 ---~----~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~---~~~y~~sk~~aE~~l~~~----~ 221 (272)
+ +..+.+++ +...+++||||+||.+|||.....+++|+.+..... .++|+.+|.++|++++.+ +
T Consensus 75 ~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g 154 (315)
T d1e6ua_ 75 PADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYG 154 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1 12233444 235689999999999999987667888887654221 247999999999999864 3
Q ss_pred --eeEEeeCceecCCCcH------H---------HHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 222 --GCVLRLAGLYKADRGA------H---------VYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 --~~IlRp~~iyG~~~~~------~---------~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++|+||+++|||+... . .....++.. .+++.+.++|+|++|+++++..++
T Consensus 155 l~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~ 224 (315)
T d1e6ua_ 155 RDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVM 224 (315)
T ss_dssp CEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHH
T ss_pred CCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhh
Confidence 7999999999986421 0 011223332 367888999999999999988764
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=1.9e-23 Score=186.08 Aligned_cols=182 Identities=16% Similarity=0.086 Sum_probs=126.9
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc----ch---hhhhhCCceeeccCc---c----ccC--CCCEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD----HH---DELINMGITPSLKWT---E----ATQ--KFPYVI 147 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~----~~---~~l~~~~i~~~~~d~---~----~~~--~~D~Vi 147 (272)
|||||||+ ||||++|++.|+++ |++|++++|-.. .. +.....+++.+.+|. + .++ ++|+||
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence 57999996 99999999999999 999999987321 11 122334677777664 1 333 799999
Q ss_pred EecCCCCCC----C-------hHHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCC-CCCCCCChHHHHHHHH
Q 024143 148 FCAPPSRSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSP-VVPIGRSPRTDVLLKA 213 (272)
Q Consensus 148 ~~a~~~~~~----~-------~~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p-~~p~~~~~y~~sk~~a 213 (272)
|+|+..... + .+..+.+++. ...++++||++||..||+.....+..|+++ ..|. ++|+.+|..+
T Consensus 79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~--~~Y~~sK~~~ 156 (338)
T d1udca_ 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQ--SPYGKSKLMV 156 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS--SHHHHHHHHH
T ss_pred ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCc--chHHHHHhhh
Confidence 999965321 1 1223344442 356899999999999998765555555554 4455 8999999999
Q ss_pred HHHHHHc-----C--eeEEeeCceecCCCc------------HHHHH----HH-cCcc---------cCCCCcccccccH
Q 024143 214 EKVILEF-----G--GCVLRLAGLYKADRG------------AHVYW----LQ-KGTV---------DSRPDHILNLIHY 260 (272)
Q Consensus 214 E~~l~~~-----~--~~IlRp~~iyG~~~~------------~~~~~----l~-~g~~---------~~~~~~~~~~I~v 260 (272)
|+++.+. + ++++||+++||+... .+... +. .+.+ ..+|.+.++|+|+
T Consensus 157 e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v 236 (338)
T d1udca_ 157 EQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV 236 (338)
T ss_dssp HHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEH
T ss_pred hHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEE
Confidence 9998753 2 789999999998531 11111 11 1222 1346788999999
Q ss_pred HHHHHHHHHH
Q 024143 261 EVNTLVLFIA 270 (272)
Q Consensus 261 ~Dva~ai~~a 270 (272)
+|++.++..+
T Consensus 237 ~D~~~~~~~~ 246 (338)
T d1udca_ 237 MDLADGHVVA 246 (338)
T ss_dssp HHHHHHHHHH
T ss_pred eehhhhcccc
Confidence 9999877654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=6e-23 Score=182.50 Aligned_cols=185 Identities=15% Similarity=0.131 Sum_probs=130.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhh-hCCceeeccCc-------c-ccCCCCEEEEecCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELI-NMGITPSLKWT-------E-ATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~-~~~i~~~~~d~-------~-~~~~~D~Vi~~a~~~ 153 (272)
|||||||+ ||||++|+++|+++ |+ +|+++++.......+. ...++.+.+|. + ..+++|+|||+|+..
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~--g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~ 78 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLRE--DHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA 78 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHS--TTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccc
Confidence 58999996 99999999999999 84 8999998765544332 24566666653 1 355899999999975
Q ss_pred CCCC-----------hHHHHHHHHH-HhcCCCeEEEEecceeecCCCCCCCCCCCCCCC-----CCCChHHHHHHHHHHH
Q 024143 154 RSLD-----------YPGDVRLAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP-----IGRSPRTDVLLKAEKV 216 (272)
Q Consensus 154 ~~~~-----------~~~~~~~l~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p-----~~~~~y~~sk~~aE~~ 216 (272)
.... ......+++. +.....+++|.||..+|+.......+|..+..+ .+.+.|+.+|..+|++
T Consensus 79 ~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~ 158 (342)
T d2blla1 79 TPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV 158 (342)
T ss_dssp CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHH
T ss_pred cccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccchhhh
Confidence 4211 1222334442 233345778999999998765555554433211 1126899999999999
Q ss_pred HHHc----C--eeEEeeCceecCCCc--------------HHHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 217 ILEF----G--GCVLRLAGLYKADRG--------------AHVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 217 l~~~----~--~~IlRp~~iyG~~~~--------------~~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++.+ + .+++||+.+||+... .+...+.+|++ +++|++.++|+|++|+|+++..++
T Consensus 159 ~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~ 236 (342)
T d2blla1 159 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII 236 (342)
T ss_dssp HHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHH
T ss_pred hhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeeh
Confidence 9865 3 799999999998532 12234555654 478899999999999999998876
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.5e-22 Score=171.43 Aligned_cols=172 Identities=16% Similarity=0.072 Sum_probs=119.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCC--CeEEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g--~~V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~ 152 (272)
.+++|||||+ ||||++|+++|+++ | ++|++++|++.+........++....|. +++.++|+||||++.
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~--g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~ 90 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQ--GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT 90 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHH--TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhC--CCCCEEEEEecChhhhcccccceeeeeeecccccccccccccccccccccccc
Confidence 3468999997 99999999999999 7 4899999987554332223445444442 357899999999986
Q ss_pred CCCC----ChH----HHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC-
Q 024143 153 SRSL----DYP----GDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (272)
Q Consensus 153 ~~~~----~~~----~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~- 221 (272)
.... .+. ....+++ ....++++|||+||..+|+.. . +.|+++|.++|+.+++++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~-------------~--~~Y~~~K~~~E~~l~~~~~ 155 (232)
T d2bkaa1 91 TRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS-------------N--FLYLQVKGEVEAKVEELKF 155 (232)
T ss_dssp CHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC-------------S--SHHHHHHHHHHHHHHTTCC
T ss_pred cccccchhhhhhhcccccceeeecccccCccccccCCccccccCc-------------c--chhHHHHHHhhhccccccc
Confidence 4321 111 1222333 245789999999998876432 1 689999999999999986
Q ss_pred --eeEEeeCceecCCCcH-HHHHHHcCc--ccCCCCcccccccHHHHHHHHHHHh
Q 024143 222 --GCVLRLAGLYKADRGA-HVYWLQKGT--VDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 --~~IlRp~~iyG~~~~~-~~~~l~~g~--~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++|+||+.+||++... ...++.... ....+......||++|+|++++.++
T Consensus 156 ~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~ 210 (232)
T d2bkaa1 156 DRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNV 210 (232)
T ss_dssp SEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHH
T ss_pred cceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHH
Confidence 7999999999986432 111111111 1123334455799999999988765
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.88 E-value=3.3e-22 Score=178.37 Aligned_cols=183 Identities=16% Similarity=0.112 Sum_probs=127.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-------hhhhhhCCceeeccCc---c----c--cCCCCEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-------HDELINMGITPSLKWT---E----A--TQKFPYVI 147 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-------~~~l~~~~i~~~~~d~---~----~--~~~~D~Vi 147 (272)
|.|||||+ ||||++|+++|+++ |++|+++++-... .+.+...+++.+..|. + . ..++|+||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 79 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 79 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--cCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence 56999996 99999999999999 9999999863221 1223345666666664 1 1 23899999
Q ss_pred EecCCCCCCC-------h----HHHHHHHH--HHhcCCCeEEEEecceeecCCC----CCCCCCCCCCCCCCCChHHHHH
Q 024143 148 FCAPPSRSLD-------Y----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSD----NGACDEDSPVVPIGRSPRTDVL 210 (272)
Q Consensus 148 ~~a~~~~~~~-------~----~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~----~~~~~E~~p~~p~~~~~y~~sk 210 (272)
|+|+...... + .....+++ ....+++||||+||..|||... ..+++|+.+..|. ++|+.+|
T Consensus 80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~--~~Y~~sK 157 (347)
T d1z45a2 80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT--NPYGHTK 157 (347)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC--SHHHHHH
T ss_pred EccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCC--ChhHhHH
Confidence 9999754211 1 12223333 2356899999999999998642 3568899888887 8999999
Q ss_pred HHHHHHHHHc------C--eeEEeeCceecCCCc------------HHH---HHH--HcCcc---cC------CCCcccc
Q 024143 211 LKAEKVILEF------G--GCVLRLAGLYKADRG------------AHV---YWL--QKGTV---DS------RPDHILN 256 (272)
Q Consensus 211 ~~aE~~l~~~------~--~~IlRp~~iyG~~~~------------~~~---~~l--~~g~~---~~------~~~~~~~ 256 (272)
..+|++++++ + ++++||+++||+... .+. ... .++++ .+ ++.+.++
T Consensus 158 ~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d 237 (347)
T d1z45a2 158 YAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRD 237 (347)
T ss_dssp HHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEEC
T ss_pred HHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeee
Confidence 9999988764 2 799999999987421 111 111 12232 12 3456778
Q ss_pred cccHHHHHHHHHHHh
Q 024143 257 LIHYEVNTLVLFIAS 271 (272)
Q Consensus 257 ~I~v~Dva~ai~~a~ 271 (272)
++++.|.+.+++.++
T Consensus 238 ~~~~~~~~~~~~~~~ 252 (347)
T d1z45a2 238 YIHVVDLAKGHIAAL 252 (347)
T ss_dssp EEEHHHHHHHHHHHH
T ss_pred eeeeecccccccccc
Confidence 889999988887764
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.88 E-value=6.9e-22 Score=178.59 Aligned_cols=184 Identities=15% Similarity=0.150 Sum_probs=124.9
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec---CC------cchhh----hh----------hCCceeeccCc---
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM---TA------DHHDE----LI----------NMGITPSLKWT--- 137 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R---~~------~~~~~----l~----------~~~i~~~~~d~--- 137 (272)
|||||||+ ||||++|+++|+++ .|++|+++++ .. ..... +. ...+..+.+|.
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~-~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRD-TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHh-CCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 59999996 99999999999863 1899999974 11 11110 00 11234444543
Q ss_pred c-------ccCCCCEEEEecCCCCCCC-------h----HHHHHHHH--HHhcCCCeEEEEecceeecCCC-------CC
Q 024143 138 E-------ATQKFPYVIFCAPPSRSLD-------Y----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSD-------NG 190 (272)
Q Consensus 138 ~-------~~~~~D~Vi~~a~~~~~~~-------~----~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~-------~~ 190 (272)
+ ...++|+|||+|+...... + ...+.+++ ....++++++++||..+|+... ..
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 161 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence 1 2357899999999754221 1 12223333 2456899999999999997542 23
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH---------------HHHHH-------
Q 024143 191 ACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA---------------HVYWL------- 242 (272)
Q Consensus 191 ~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~---------------~~~~l------- 242 (272)
++.|+++..|. ++|+.+|+.+|++++++ + ++++||+++|||+... +...+
T Consensus 162 ~~~e~~~~~p~--~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~ 239 (383)
T d1gy8a_ 162 PIDINAKKSPE--SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPD 239 (383)
T ss_dssp CBCTTSCCBCS--SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC
T ss_pred ccccccCCCCC--CHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccc
Confidence 67788888887 89999999999999875 3 7999999999997531 00111
Q ss_pred ---------HcCcc---------cCCCCcccccccHHHHHHHHHHHh
Q 024143 243 ---------QKGTV---------DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 243 ---------~~g~~---------~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..+++ .++|.+.++|+|++|+|++++.++
T Consensus 240 ~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~ 286 (383)
T d1gy8a_ 240 QRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILAL 286 (383)
T ss_dssp -----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHH
T ss_pred ccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHH
Confidence 11111 134678899999999999998765
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.88 E-value=4.1e-22 Score=177.71 Aligned_cols=184 Identities=16% Similarity=0.021 Sum_probs=124.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-------CCc-eeeccCc-------cccCCCCEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGI-TPSLKWT-------EATQKFPYVI 147 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-------~~i-~~~~~d~-------~~~~~~D~Vi 147 (272)
.++|||||+ ||||++|+++|+++ |++|++++|+..+...+.. ... ..+.+|. +++.++|+|+
T Consensus 11 gk~VlVTG~sGfIGs~l~~~Ll~~--G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~ 88 (342)
T d1y1pa1 11 GSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred cCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence 379999996 99999999999999 9999999998765543321 111 1233332 3678999999
Q ss_pred EecCCCCCCC----h----HHHHHHHHH--Hh-cCCCeEEEEecceeecCCC----CCC----------------CCCCC
Q 024143 148 FCAPPSRSLD----Y----PGDVRLAAL--SW-NGEGSFLFTSSSAIYDCSD----NGA----------------CDEDS 196 (272)
Q Consensus 148 ~~a~~~~~~~----~----~~~~~~l~~--~~-~gvkr~V~~SS~~vYg~~~----~~~----------------~~E~~ 196 (272)
|+++...... + ...+.+++. .. .++++|||+||..+++... +.. ..|+.
T Consensus 89 ~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~ 168 (342)
T d1y1pa1 89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESD 168 (342)
T ss_dssp ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTS
T ss_pred hhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccC
Confidence 9999755332 1 223344442 23 3699999999986542211 112 23444
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc----C----eeEEeeCceecCCCc------H---HHHHHHcCcc--cCCCCccccc
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYKADRG------A---HVYWLQKGTV--DSRPDHILNL 257 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~----~----~~IlRp~~iyG~~~~------~---~~~~l~~g~~--~~~~~~~~~~ 257 (272)
+..|. ++|+.+|..+|++++.+ + .+++||+.+|||... . +...+.+|+. ...++..++|
T Consensus 169 ~~~p~--~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~ 246 (342)
T d1y1pa1 169 PQKSL--WVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYY 246 (342)
T ss_dssp TTHHH--HHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEE
T ss_pred CCCCc--CcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceee
Confidence 44444 68999999999987654 2 578899999998532 1 2223555553 2345667899
Q ss_pred ccHHHHHHHHHHHh
Q 024143 258 IHYEVNTLVLFIAS 271 (272)
Q Consensus 258 I~v~Dva~ai~~a~ 271 (272)
||++|+|+++++++
T Consensus 247 v~v~Dva~~~i~~l 260 (342)
T d1y1pa1 247 VSAVDIGLLHLGCL 260 (342)
T ss_dssp EEHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHhh
Confidence 99999999988775
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.87 E-value=2.8e-22 Score=172.65 Aligned_cols=175 Identities=17% Similarity=0.157 Sum_probs=128.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCcccc--CCCCEEEEecCCCCCCC----
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEAT--QKFPYVIFCAPPSRSLD---- 157 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~--~~~D~Vi~~a~~~~~~~---- 157 (272)
|||||||+ ||||++|+++|.++ ||+|++++|..-....... ++ +.+ .++|+|||+++......
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~--g~~Vi~~~r~~~D~~d~~~--~~------~~l~~~~~d~vih~a~~~~~~~~~~~ 71 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGK--NVEVIPTDVQDLDITNVLA--VN------KFFNEKKPNVVINCAAHTAVDKCEEQ 71 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTTCCTTCHHH--HH------HHHHHHCCSEEEECCCCCCHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEeechhccCCCHHH--HH------HHHHHcCCCEEEeecccccccccccc
Confidence 57999997 99999999999999 9999999986532211000 00 122 26799999998754211
Q ss_pred hHHH-------HHHHH-HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEee
Q 024143 158 YPGD-------VRLAA-LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRL 227 (272)
Q Consensus 158 ~~~~-------~~~l~-~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlRp 227 (272)
.... ...+. .+.....+++++||..+|+.....+.+|+++..|. +.|+++|..+|+++++.+ .+|+||
T Consensus 72 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~--~~~~~~k~~~e~~~~~~~~~~~i~R~ 149 (281)
T d1vl0a_ 72 YDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQ--SAYGKTKLEGENFVKALNPKYYIVRT 149 (281)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred chhhcccccccccccccccccccccccccccceeeeccccccccccccccch--hhhhhhhhHHHHHHHHhCCCccccce
Confidence 0001 11111 12334678999999999988777889999988877 899999999999999987 899999
Q ss_pred CceecCCCcHHH---HHHHcCcc-cCCCCcccccccHHHHHHHHHHHh
Q 024143 228 AGLYKADRGAHV---YWLQKGTV-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 228 ~~iyG~~~~~~~---~~l~~g~~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+++||++..... ..+.++.. ...+++.++++|++|+++++..++
T Consensus 150 ~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~ 197 (281)
T d1vl0a_ 150 AWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVI 197 (281)
T ss_dssp CSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHH
T ss_pred eEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhh
Confidence 999999876432 23334443 344678999999999999998875
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.87 E-value=6e-22 Score=179.43 Aligned_cols=182 Identities=12% Similarity=0.046 Sum_probs=122.6
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC---------------C-cc-h------hhhhhCCceeeccCc---
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT---------------A-DH-H------DELINMGITPSLKWT--- 137 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~---------------~-~~-~------~~l~~~~i~~~~~d~--- 137 (272)
|||||||+ ||||++|+++|+++ ||+|++++.- + .. . ..+....++.+.+|.
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~--g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~ 79 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF 79 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--cCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCH
Confidence 78999996 99999999999999 9999998621 0 00 0 111224566666664
Q ss_pred c----ccC--CCCEEEEecCCCCC----CC----------hHHHHHHHHH--HhcC-CCeEEEEecceeecCCCCCCCC-
Q 024143 138 E----ATQ--KFPYVIFCAPPSRS----LD----------YPGDVRLAAL--SWNG-EGSFLFTSSSAIYDCSDNGACD- 193 (272)
Q Consensus 138 ~----~~~--~~D~Vi~~a~~~~~----~~----------~~~~~~~l~~--~~~g-vkr~V~~SS~~vYg~~~~~~~~- 193 (272)
+ ++. ++|+|||+|+.... .+ .+..+.+++. ...+ .+++++.||..+|+... .+..
T Consensus 80 ~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~-~~~~~ 158 (393)
T d1i24a_ 80 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIEE 158 (393)
T ss_dssp HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBCS
T ss_pred HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccc-ccccc
Confidence 1 232 67999999986431 11 1222334442 2334 45788888888886532 1111
Q ss_pred -------------CCCCCCCCCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCcH-----------------
Q 024143 194 -------------EDSPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA----------------- 237 (272)
Q Consensus 194 -------------E~~p~~p~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~~----------------- 237 (272)
|..|..|. ++|+.+|+.+|.+++.+ + .+++||+++|||+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~p~--~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~ 236 (393)
T d1i24a_ 159 GYITITHNGRTDTLPYPKQAS--SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVF 236 (393)
T ss_dssp SEEEEEETTEEEEEECCCCCC--SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTT
T ss_pred ccccccccccccccccccccc--cHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccc
Confidence 12244554 79999999999998754 3 7999999999986421
Q ss_pred ------HHHHHHcCcc---cCCCCcccccccHHHHHHHHHHHh
Q 024143 238 ------HVYWLQKGTV---DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 238 ------~~~~l~~g~~---~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+...+..|++ ++++.+.++|+|++|++++++.++
T Consensus 237 ~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~ 279 (393)
T d1i24a_ 237 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAI 279 (393)
T ss_dssp CCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred ccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHH
Confidence 1122344543 378899999999999999999876
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=7.7e-21 Score=169.09 Aligned_cols=183 Identities=16% Similarity=0.102 Sum_probs=122.6
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc------c----h---hhhhhCCceeeccCc---c----c--cC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD------H----H---DELINMGITPSLKWT---E----A--TQ 141 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~------~----~---~~l~~~~i~~~~~d~---~----~--~~ 141 (272)
+||||||+ ||||++|+++|+++ |++|++++|... . . ..+....+..+.+|. + . -.
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~--g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 80 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CeEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc
Confidence 68999996 99999999999999 999999975211 1 1 122234456666653 1 1 24
Q ss_pred CCCEEEEecCCCCCCC--------h---HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCC-CCCCCCChHH
Q 024143 142 KFPYVIFCAPPSRSLD--------Y---PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP-VVPIGRSPRT 207 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~---~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p-~~p~~~~~y~ 207 (272)
++|+|+|+|+...... + +....+++ ....++++|+|+||..+|+........++.+ ..|. ++|+
T Consensus 81 ~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~--~~Y~ 158 (346)
T d1ek6a_ 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCT--NPYG 158 (346)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS--SHHH
T ss_pred ccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccC--ChHH
Confidence 6678999999754211 1 12223333 2456899999999999998764333333332 3344 7999
Q ss_pred HHHHHHHHHHHHc-----C--eeEEeeCceecCCCc------------HHHH---H--HHcCcc---------cCCCCcc
Q 024143 208 DVLLKAEKVILEF-----G--GCVLRLAGLYKADRG------------AHVY---W--LQKGTV---------DSRPDHI 254 (272)
Q Consensus 208 ~sk~~aE~~l~~~-----~--~~IlRp~~iyG~~~~------------~~~~---~--l~~g~~---------~~~~~~~ 254 (272)
.+|..+|+.+.++ + .+++||+.+||+... .+.. . +.++.+ ...+.+.
T Consensus 159 ~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~ 238 (346)
T d1ek6a_ 159 KSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238 (346)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCE
T ss_pred HHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCee
Confidence 9999999988763 2 799999999998531 0111 1 222222 2346788
Q ss_pred cccccHHHHHHHHHHHh
Q 024143 255 LNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 255 ~~~I~v~Dva~ai~~a~ 271 (272)
++|+|++|+|.++..++
T Consensus 239 Rdfi~v~D~a~~~~~~~ 255 (346)
T d1ek6a_ 239 RDYIHVVDLAKGHIAAL 255 (346)
T ss_dssp ECEEEHHHHHHHHHHHH
T ss_pred EeEEEEEeccchhhhhc
Confidence 99999999999887653
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.85 E-value=2e-21 Score=161.73 Aligned_cols=167 Identities=11% Similarity=0.023 Sum_probs=110.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCC--eEEEEecCCcchhhhhhCCceeeccCc-----cccCCCCEEEEecCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPSLKWT-----EATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~l~~~~i~~~~~d~-----~~~~~~D~Vi~~a~~~~~ 155 (272)
.|||||||+ ||||++|+++|+++ |+ +|++++|++.... ..++....|. .....+|+||||++....
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~--~~~~~v~~~~r~~~~~~----~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~~~ 75 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSE--PTLAKVIAPARKALAEH----PRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIK 75 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHC--TTCCEEECCBSSCCCCC----TTEECCBSCHHHHGGGCCSCCSEEEECCCCCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEEEeCCchhhc----ccccccccchhhhhhccccchheeeeeeeeecc
Confidence 379999997 99999999999999 87 6777777643311 1122222221 234578999999976421
Q ss_pred --CC---h----HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC---
Q 024143 156 --LD---Y----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--- 221 (272)
Q Consensus 156 --~~---~----~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--- 221 (272)
.. + .....+++ ....++++|+|+||.++|+.. . +.|+++|..+|+.+++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~-------------~--~~y~~~K~~~E~~l~~~~~~~ 140 (212)
T d2a35a1 76 EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS-------------S--IFYNRVKGELEQALQEQGWPQ 140 (212)
T ss_dssp HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC-------------S--SHHHHHHHHHHHHHTTSCCSE
T ss_pred ccccccccccchhhhhhhccccccccccccccccccccccccc-------------c--cchhHHHHHHhhhcccccccc
Confidence 11 1 11222333 246789999999998876432 1 689999999999999876
Q ss_pred eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 222 GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 ~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++|+||+.+||+......................++||++|+|++++.++
T Consensus 141 ~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~ 190 (212)
T d2a35a1 141 LTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLA 190 (212)
T ss_dssp EEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHH
T ss_pred ceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHH
Confidence 89999999999975421111111111111123356799999999998875
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.83 E-value=5.2e-20 Score=163.74 Aligned_cols=185 Identities=14% Similarity=0.088 Sum_probs=129.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-----hCCceeeccCc---c----c--cCCCCEEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----NMGITPSLKWT---E----A--TQKFPYVI 147 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-----~~~i~~~~~d~---~----~--~~~~D~Vi 147 (272)
..|||||||+ ||||++|+++|+++ |++|++++|.+.....+. ..+++.+.+|. + + ...+|+|+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~ 84 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVF 84 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhh
Confidence 3489999996 99999999999999 999999999866543321 13577777764 1 2 23789999
Q ss_pred EecCCCCCCC-----------hHHHHHHHHH--Hh-cCCCeEEEEecceeecCCC-CCCCCCCCCCCCCCCChHHHHHHH
Q 024143 148 FCAPPSRSLD-----------YPGDVRLAAL--SW-NGEGSFLFTSSSAIYDCSD-NGACDEDSPVVPIGRSPRTDVLLK 212 (272)
Q Consensus 148 ~~a~~~~~~~-----------~~~~~~~l~~--~~-~gvkr~V~~SS~~vYg~~~-~~~~~E~~p~~p~~~~~y~~sk~~ 212 (272)
|+|+...... ....+.+++. .. .+.+.+++.|+..+|.... ..+.+|+.+..|. ++|+.+|..
T Consensus 85 ~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~--~~y~~~k~~ 162 (356)
T d1rkxa_ 85 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY--DPYSNSKGC 162 (356)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS--SHHHHHHHH
T ss_pred hhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCC--Ccccccccc
Confidence 9998754211 1122334432 22 3456666666665554432 3567788887787 899999999
Q ss_pred HHHHHHHc-------------C--eeEEeeCceecCCCc---HH----HHHHHcCcc--cCCCCcccccccHHHHHHHHH
Q 024143 213 AEKVILEF-------------G--GCVLRLAGLYKADRG---AH----VYWLQKGTV--DSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 213 aE~~l~~~-------------~--~~IlRp~~iyG~~~~---~~----~~~l~~g~~--~~~~~~~~~~I~v~Dva~ai~ 268 (272)
.|..+..+ + ++++||+++|||+.. .+ ...+..+.+ ++.+.+.++++|++|+++++.
T Consensus 163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~ 242 (356)
T d1rkxa_ 163 AELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYL 242 (356)
T ss_dssp HHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHH
T ss_pred chhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhh
Confidence 99877642 2 689999999999752 11 223444444 477889999999999999988
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
.++
T Consensus 243 ~~~ 245 (356)
T d1rkxa_ 243 LLA 245 (356)
T ss_dssp HHH
T ss_pred hhh
Confidence 765
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=2.9e-19 Score=154.64 Aligned_cols=180 Identities=13% Similarity=0.109 Sum_probs=114.1
Q ss_pred EEEEcC-cHHHHHHHHHHHhcCCCC-eEEEEecCCc--chhhhhhCCceeec--cCc-------cccCCCCEEEEecCCC
Q 024143 87 LLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTAD--HHDELINMGITPSL--KWT-------EATQKFPYVIFCAPPS 153 (272)
Q Consensus 87 IlItGa-GfiG~~l~~~L~~~~~g~-~V~~~~R~~~--~~~~l~~~~i~~~~--~d~-------~~~~~~D~Vi~~a~~~ 153 (272)
|||||+ ||||++|+++|+++ |+ +|+++++-.. +...+....+.... .+. .....+++|+|+|+..
T Consensus 2 ILITGgsGfIGs~lv~~L~~~--g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~ 79 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS 79 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTT--TCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred EEEecCccHHHHHHHHHHHhC--CCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhhhhcccchhhhhhhcccc
Confidence 899996 99999999999999 95 7999874322 22223322222111 110 2456789999999854
Q ss_pred CCCC-----h----HHHHHHHHH--HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC-
Q 024143 154 RSLD-----Y----PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (272)
Q Consensus 154 ~~~~-----~----~~~~~~l~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~- 221 (272)
.... + .....+++. ...++ ++++.||..+|+.......+|+.+..|. +.|+.+|..+|.+++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~--~~Y~~~K~~~e~~~~~~~~ 156 (307)
T d1eq2a_ 80 STTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL--NVYGYSKFLFDEYVRQILP 156 (307)
T ss_dssp CTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS--SHHHHHHHHHHHHHHHHGG
T ss_pred cccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc--cccccccchhhhhcccccc
Confidence 4221 1 122222321 23345 5777777777765544555666555565 899999999999998752
Q ss_pred -----eeEEeeCceecCCCcH----------HHHHHHcCcc----cCCCCcccccccHHHHHHHHHHHh
Q 024143 222 -----GCVLRLAGLYKADRGA----------HVYWLQKGTV----DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 222 -----~~IlRp~~iyG~~~~~----------~~~~l~~g~~----~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++++||+++|||+... +...+..++. .+.+...++|+|++|+++++..++
T Consensus 157 ~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~ 225 (307)
T d1eq2a_ 157 EANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL 225 (307)
T ss_dssp GCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHH
T ss_pred ccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHh
Confidence 7999999999997531 1223455543 256778899999999999988764
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.80 E-value=3.6e-19 Score=156.43 Aligned_cols=182 Identities=16% Similarity=0.077 Sum_probs=119.8
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC--cchh---hhh-hCCceeeccCc---c----ccC--CCCEEEEe
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA--DHHD---ELI-NMGITPSLKWT---E----ATQ--KFPYVIFC 149 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~--~~~~---~l~-~~~i~~~~~d~---~----~~~--~~D~Vi~~ 149 (272)
||||||+ ||||++|+++|+++ ||+|+++++-. .... .+. ..+++.+.+|. + +++ ++|+|||+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~--g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~ 79 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 79 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEee
Confidence 7999996 99999999999999 99999997532 1212 121 13566666664 1 232 57999999
Q ss_pred cCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEecceee-cCCCC----------------CCCCCCCCCC
Q 024143 150 APPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIY-DCSDN----------------GACDEDSPVV 199 (272)
Q Consensus 150 a~~~~~~----~-------~~~~~~~l~--~~~~gvkr~V~~SS~~vY-g~~~~----------------~~~~E~~p~~ 199 (272)
|+..... + .+..+.+++ ....+++++|+.||++++ +.... ....+.++..
T Consensus 80 aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T d1orra_ 80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD 159 (338)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred cccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccc
Confidence 9975421 1 123344554 234577766666665544 32211 1223444555
Q ss_pred CCCCChHHHHHHHHHHHHHHc----C--eeEEeeCceecCCCc---------HHHHHH---H--cCcc---cCCCCcccc
Q 024143 200 PIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG---------AHVYWL---Q--KGTV---DSRPDHILN 256 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~----~--~~IlRp~~iyG~~~~---------~~~~~l---~--~g~~---~~~~~~~~~ 256 (272)
|. +.|+.+|...|.++... + .+++|+..+|++... .+...+ . .+++ +++|++.++
T Consensus 160 ~~--~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~ 237 (338)
T d1orra_ 160 FH--SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 237 (338)
T ss_dssp CC--HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEE
T ss_pred cc--cccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEe
Confidence 55 78999999999887654 3 788999999976431 111111 1 2332 478899999
Q ss_pred cccHHHHHHHHHHHh
Q 024143 257 LIHYEVNTLVLFIAS 271 (272)
Q Consensus 257 ~I~v~Dva~ai~~a~ 271 (272)
|+|++|++++++.++
T Consensus 238 ~~~v~D~~~~~~~~l 252 (338)
T d1orra_ 238 VLHAEDMISLYFTAL 252 (338)
T ss_dssp CEEHHHHHHHHHHHH
T ss_pred eecccchhhHHHHHH
Confidence 999999999998875
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.80 E-value=3.6e-19 Score=153.55 Aligned_cols=174 Identities=12% Similarity=0.088 Sum_probs=117.7
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc----cccC--CCCEEEEecCCCCC--
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRS-- 155 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~----~~~~--~~D~Vi~~a~~~~~-- 155 (272)
|||||||+ ||||++|++.|.++ |+.| ++++...... ....|. +.++ ++|+|||||+....
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~--g~~v-~~~~~~~~~~--------~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~~ 69 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPV--GNLI-ALDVHSKEFC--------GDFSNPKGVAETVRKLRPDVIVNAAAHTAVDK 69 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTT--SEEE-EECTTCSSSC--------CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEE-EEECCCcccc--------CcCCCHHHHHHHHHHcCCCEEEEecccccccc
Confidence 68999996 99999999999998 7644 4555432210 111121 1222 67999999986532
Q ss_pred --CC-------hHHHHHHHH-HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--ee
Q 024143 156 --LD-------YPGDVRLAA-LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (272)
Q Consensus 156 --~~-------~~~~~~~l~-~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~ 223 (272)
.. ......+++ .+.....+++++||+.+|+...+.+++|++++.|. +.|+++|..+|+.++++. ..
T Consensus 70 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~--~~y~~~k~~~e~~~~~~~~~~~ 147 (298)
T d1n2sa_ 70 AESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPL--NVYGKTKLAGEKALQDNCPKHL 147 (298)
T ss_dssp HTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCS--SHHHHHHHHHHHHHHHHCSSEE
T ss_pred cccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCC--chHhhhhhhhhhhHHhhhcccc
Confidence 11 112223333 23344578999999999987767789999998887 899999999999998865 66
Q ss_pred EEeeCcee-cCCCcHHH---HHHHcCcc-cCCCCcccccccHHHHHHHHHHHh
Q 024143 224 VLRLAGLY-KADRGAHV---YWLQKGTV-DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 224 IlRp~~iy-G~~~~~~~---~~l~~g~~-~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++|++..| |++..... ..+..+.. ...++...+++|++|+++++..++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i 200 (298)
T d1n2sa_ 148 IFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAI 200 (298)
T ss_dssp EEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHH
T ss_pred cccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHH
Confidence 66666665 44444321 22333333 344677889999999999987664
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.79 E-value=3.4e-19 Score=154.56 Aligned_cols=178 Identities=11% Similarity=-0.055 Sum_probs=125.0
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch--------hhhhhCCceeeccCc-------cccCCCCEEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH--------DELINMGITPSLKWT-------EATQKFPYVI 147 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~--------~~l~~~~i~~~~~d~-------~~~~~~D~Vi 147 (272)
++||||||+ ||||++|+++|+++ ||+|++++|++... ..+...+++.+.+|. +.+.++++++
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~ 80 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI 80 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhh
Confidence 468999996 99999999999999 99999999975432 123345677776653 2578999999
Q ss_pred EecCCCCCCChHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--ee
Q 024143 148 FCAPPSRSLDYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (272)
Q Consensus 148 ~~a~~~~~~~~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~ 223 (272)
++++............+++ .+..+..++++.||.++++.. +..+..|. ..|...+..+|+...+.+ ++
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 152 (312)
T d1qyda_ 81 SALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI------MEHALQPG--SITFIDKRKVRRAIEAASIPYT 152 (312)
T ss_dssp ECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS------CCCCCSST--THHHHHHHHHHHHHHHTTCCBC
T ss_pred hhhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCC------cccccchh--hhhhHHHHHHHHhhcccccceE
Confidence 9998654322111222222 245667888888887665432 22333343 678888999999988887 89
Q ss_pred EEeeCceecCCCcHHH----HHHHc-Ccc--cCCCCcccccccHHHHHHHHHHHh
Q 024143 224 VLRLAGLYKADRGAHV----YWLQK-GTV--DSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 224 IlRp~~iyG~~~~~~~----~~l~~-g~~--~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
++||+.+||+...... ..... +.+ ++.|+..+++||++|+|++++.++
T Consensus 153 i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l 207 (312)
T d1qyda_ 153 YVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI 207 (312)
T ss_dssp EEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHT
T ss_pred EeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHh
Confidence 9999999997433211 01111 222 477899999999999999998876
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.76 E-value=1.4e-18 Score=144.72 Aligned_cols=177 Identities=14% Similarity=0.080 Sum_probs=117.1
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCe--EEEEecCCcchhhhhhCCceeeccCc-------cccCCCCEEEEecCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQ--IYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~--V~~~~R~~~~~~~l~~~~i~~~~~d~-------~~~~~~D~Vi~~a~~ 152 (272)
.|++|||||+ ||||++++++|+++ |++ |++++|++++...+. .+++.+.+|. ++++++|+|||+++.
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~--g~~v~v~~~~R~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~ 78 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEG--SDKFVAKGLVRSAQGKEKIG-GEADVFIGDITDADSINPAFQGIDALVILTSA 78 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHT--TTTCEEEEEESCHHHHHHTT-CCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC--CCcEEEEEEcCCHHHHHhcc-CCcEEEEeeeccccccccccccceeeEEEEee
Confidence 4789999996 99999999999999 864 677888877665543 4566666553 257899999999975
Q ss_pred CCC------------C-----C---h----HHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChH
Q 024143 153 SRS------------L-----D---Y----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (272)
Q Consensus 153 ~~~------------~-----~---~----~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y 206 (272)
... . . . .....+++ ......+++.+.|+...+.... +........|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~--------~~~~~~~~~~ 150 (252)
T d2q46a1 79 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH--------PLNKLGNGNI 150 (252)
T ss_dssp CCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC--------GGGGGGGCCH
T ss_pred ccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCc--------ccccccccch
Confidence 321 0 0 0 12233333 2345688899988876654221 1111111456
Q ss_pred HHHHHHHHHHHHHcC--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHhC
Q 024143 207 TDVLLKAEKVILEFG--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAST 272 (272)
Q Consensus 207 ~~sk~~aE~~l~~~~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~~ 272 (272)
...+...+.+..+.+ ++++||+++||+...........+.. ......++||++|+|++++.+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~--~~~~~~~~i~~~Dva~a~~~~l~ 216 (252)
T d2q46a1 151 LVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDE--LLQTDTKTVPRADVAEVCIQALL 216 (252)
T ss_dssp HHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSCEEEESTTG--GGGSSCCEEEHHHHHHHHHHHTT
T ss_pred hhhhhhhhhhhhcccccceeecceEEECCCcchhhhhhccCcc--cccCCCCeEEHHHHHHHHHHHhC
Confidence 777888888888877 89999999999975321100111111 12344679999999999998863
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.76 E-value=1.2e-18 Score=149.88 Aligned_cols=175 Identities=14% Similarity=0.025 Sum_probs=120.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh---------hhhhCCceeeccCc-------cccCCCCEE
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---------ELINMGITPSLKWT-------EATQKFPYV 146 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~---------~l~~~~i~~~~~d~-------~~~~~~D~V 146 (272)
++||||||+ ||||++++++|+++ ||+|++++|++.... .+...+++.+.+|. ..+.+++.|
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v 80 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV 80 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceee
Confidence 579999997 99999999999999 999999999765432 22334566666653 246789999
Q ss_pred EEecCCCCCCChHHHHHHHHHHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeE
Q 024143 147 IFCAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCV 224 (272)
Q Consensus 147 i~~a~~~~~~~~~~~~~~l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~I 224 (272)
+|+++..........++. ....+++++++.|+...+.. +..+..+. ..+...+...|..+.+.+ ++|
T Consensus 81 i~~~~~~~~~~~~~~~~a--~~~~~~~~~~~~s~~~~~~~-------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i 149 (307)
T d1qyca_ 81 ISTVGSLQIESQVNIIKA--IKEVGTVKRFFPSEFGNDVD-------NVHAVEPA--KSVFEVKAKVRRAIEAEGIPYTY 149 (307)
T ss_dssp EECCCGGGSGGGHHHHHH--HHHHCCCSEEECSCCSSCTT-------SCCCCTTH--HHHHHHHHHHHHHHHHHTCCBEE
T ss_pred eecccccccchhhHHHHH--HHHhccccceeeeccccccc-------cccccccc--cccccccccccchhhccCCCcee
Confidence 999876443211111111 23457888999888654332 11121122 356667788888888877 899
Q ss_pred EeeCceecCCCcHHHHH---HHcCc---ccCCCCcccccccHHHHHHHHHHHh
Q 024143 225 LRLAGLYKADRGAHVYW---LQKGT---VDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 225 lRp~~iyG~~~~~~~~~---l~~g~---~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+||+.+||+....+... ..++. +++.+++.++|||++|+|++++.++
T Consensus 150 ~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 202 (307)
T d1qyca_ 150 VSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAV 202 (307)
T ss_dssp EECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTS
T ss_pred cccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHh
Confidence 99999999764332211 12222 1467899999999999999998776
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.56 E-value=1.9e-14 Score=127.38 Aligned_cols=174 Identities=13% Similarity=0.004 Sum_probs=117.0
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh--hhhh-CCceeeccCc--------cccCCCCEEEEecC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--ELIN-MGITPSLKWT--------EATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~--~l~~-~~i~~~~~d~--------~~~~~~D~Vi~~a~ 151 (272)
+|+|+|||+ ||||++|+++|+++ ||+|++++|++.+.. .+.. .+++.+.+|. .++.++|.+++...
T Consensus 3 kktIlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~ 80 (350)
T d1xgka_ 3 KKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT 80 (350)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCChHHHHHHHHHHHhC--CCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence 478999996 99999999999999 999999999876643 2222 4677777663 15678898887766
Q ss_pred CCCCCChHHHHHHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHcC--eeEEee
Q 024143 152 PSRSLDYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRL 227 (272)
Q Consensus 152 ~~~~~~~~~~~~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~~--~~IlRp 227 (272)
..... ......+++ ....|++++++.||...+.... ..+. .+|..+|...|+++.+.+ ++++||
T Consensus 81 ~~~~~-~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~---------~~~~--~~~~~~k~~~~~~~~~~~~~~~~vr~ 148 (350)
T d1xgka_ 81 SQAGD-EIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG---------PWPA--VPMWAPKFTVENYVRQLGLPSTFVYA 148 (350)
T ss_dssp STTSC-HHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS---------SCCC--CTTTHHHHHHHHHHHTSSSCEEEEEE
T ss_pred cccch-hhhhhhHHHHHHHHhCCCceEEEeeccccccCC---------cccc--hhhhhhHHHHHHHHHhhccCceeeee
Confidence 54332 233334444 2456888999999866433211 0111 345678999999998876 899999
Q ss_pred CceecCCCc---HHH--HHHHcCcc----cCCCCcccccccH-HHHHHHHHHHh
Q 024143 228 AGLYKADRG---AHV--YWLQKGTV----DSRPDHILNLIHY-EVNTLVLFIAS 271 (272)
Q Consensus 228 ~~iyG~~~~---~~~--~~l~~g~~----~~~~~~~~~~I~v-~Dva~ai~~a~ 271 (272)
+.+++.... +.. .....+.. ...++..+.++++ +|+++++..++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l 202 (350)
T d1xgka_ 149 GIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIF 202 (350)
T ss_dssp CEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHH
T ss_pred ceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHH
Confidence 998875321 100 01122322 2456778888886 79999887765
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=4.6e-09 Score=88.23 Aligned_cols=167 Identities=11% Similarity=0.062 Sum_probs=105.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--CCceeeccCc----------cccCCCCEEEEe
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT----------EATQKFPYVIFC 149 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--~~i~~~~~d~----------~~~~~~D~Vi~~ 149 (272)
..|++||||+ +-||+.++++|.++ |++|++++|++++++++.. .++..+..|. +.+..+|++||+
T Consensus 6 ~GK~~lITGas~GIG~aia~~la~~--G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn 83 (244)
T d1pr9a_ 6 AGRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence 3478999996 99999999999999 9999999999877665543 2445554443 135689999999
Q ss_pred cCCCCCCC--------hHHHH-----------HHHH---HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 150 APPSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 150 a~~~~~~~--------~~~~~-----------~~l~---~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
|+...... |.+.+ +.++ ..+.+..++|++||...+... |. ...|+
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~------------~~-~~~Y~ 150 (244)
T d1pr9a_ 84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV------------TN-HSVYC 150 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------TT-BHHHH
T ss_pred cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc------------cc-hhhhh
Confidence 98654321 11111 1111 123456799999997643211 11 25899
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCceecCC------CcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKAD------RGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 208 ~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~------~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
.+|...+.+.+.. + +-.+.||.+.-+- .......+.+..|.+ -+...+|+|++++..
T Consensus 151 asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~peevA~~v~fL 222 (244)
T d1pr9a_ 151 STKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLG------KFAEVEHVVNAILFL 222 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTC------SCBCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCC------CCcCHHHHHHHHHHH
Confidence 9999998877654 2 5678898875331 001111222222221 256788998887654
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.04 E-value=3.1e-09 Score=88.96 Aligned_cols=167 Identities=10% Similarity=-0.008 Sum_probs=101.6
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCcc-----------ccCCCCEEEEe
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFC 149 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~-----------~~~~~D~Vi~~ 149 (272)
+..|++||||+ +-||+.++++|.++ |++|++++|+.+..+.+. .+.....|.+ ....+|++||+
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn 80 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSGAPKGLF--GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 80 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSCCCTTSE--EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcchhcCce--EEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence 56689999997 89999999999999 999999999877654321 2222223321 24589999999
Q ss_pred cCCCCCCC--------hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHH
Q 024143 150 APPSRSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (272)
Q Consensus 150 a~~~~~~~--------~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (272)
|+...... |.+.++ .++ +...+..++|++||...+... | ....|+.
T Consensus 81 AG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~------------~-~~~~Y~a 147 (237)
T d1uzma1 81 AGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI------------G-NQANYAA 147 (237)
T ss_dssp CSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------------------CCHHHHH
T ss_pred ecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC------------c-ccHHHHH
Confidence 98643211 211111 111 234566799999997653211 1 1158999
Q ss_pred HHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 209 VLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 209 sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+|...+.+.+.. + +-.+.||.+.-+-.. .....+.+..+.+ -+...+|+|.+++..+
T Consensus 148 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~------R~~~pedvA~~v~fL~ 217 (237)
T d1uzma1 148 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAK------RVGTPAEVAGVVSFLA 217 (237)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTC------SCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCC------CCcCHHHHHHHHHHHh
Confidence 999998877653 2 456899988533110 1111112111111 2566789998876543
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.04 E-value=6.1e-09 Score=87.73 Aligned_cols=135 Identities=12% Similarity=0.056 Sum_probs=91.4
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc--------------cccCCCCEE
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------------EATQKFPYV 146 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~--------------~~~~~~D~V 146 (272)
+..|++||||+ +-||+.++++|.++ |++|+..+|+++..+..+..+...+..|. +.+..+|++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL 80 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVL 80 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeE
Confidence 34578999996 99999999999999 99999999987765544444555555543 124689999
Q ss_pred EEecCCCCCCC--------hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCh
Q 024143 147 IFCAPPSRSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (272)
Q Consensus 147 i~~a~~~~~~~--------~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~ 205 (272)
||+|+...... |.+.+. .++ +.+.+-.++|++||...+... | ....
T Consensus 81 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~------------~-~~~~ 147 (248)
T d2d1ya1 81 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE------------Q-ENAA 147 (248)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC------------T-TBHH
T ss_pred EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc------------c-ccch
Confidence 99998643211 211111 111 134456799999998753211 1 1258
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCcee
Q 024143 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (272)
Q Consensus 206 y~~sk~~aE~~l~~~-------~--~~IlRp~~iy 231 (272)
|+.+|...+.+.+.. + +-.+.||.+-
T Consensus 148 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~ 182 (248)
T d2d1ya1 148 YNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIA 182 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCC
Confidence 999999998876653 2 4568888874
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.03 E-value=5.9e-09 Score=87.46 Aligned_cols=167 Identities=12% Similarity=0.016 Sum_probs=104.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--CCceeeccCc----------cccCCCCEEEEe
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT----------EATQKFPYVIFC 149 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--~~i~~~~~d~----------~~~~~~D~Vi~~ 149 (272)
..|++||||+ +-||+.++++|.++ |++|++.+|++++..++.. .++..+..|. +.+.++|++||+
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn 81 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN 81 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence 3478999996 89999999999999 9999999999877665533 2455555553 135689999999
Q ss_pred cCCCCCCC--------hHHHH-----------HHHH---HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 150 APPSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 150 a~~~~~~~--------~~~~~-----------~~l~---~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
|+...... |.+.+ +.++ ..+.+..++|++||...+... |. ...|+
T Consensus 82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------~~-~~~Y~ 148 (242)
T d1cyda_ 82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF------------PN-LITYS 148 (242)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------TT-BHHHH
T ss_pred CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccC------------Cc-ccccc
Confidence 98644321 11111 1111 123345689999997643211 11 25899
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCceecCCC------cHHHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKADR------GAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 208 ~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~------~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
.+|...+.+.+.. + +-.+-||.+.-+-. ......+.+..+. .-+...+|+|++++..
T Consensus 149 asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl------~R~~~peeva~~v~fL 220 (242)
T d1cyda_ 149 STKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL------RKFAEVEDVVNSILFL 220 (242)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTT------SSCBCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCC------CCCcCHHHHHHHHHHH
Confidence 9999998877654 2 46688988753210 0111112211111 1256678999887654
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.00 E-value=5.6e-09 Score=87.66 Aligned_cols=168 Identities=10% Similarity=0.001 Sum_probs=105.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D 144 (272)
..|+++|||+ +-||+.++++|.++ |++|+..+|++++.+.+.+ .....+..|. + ...++|
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~--G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAAR--GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVD 80 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcc
Confidence 3478999996 99999999999999 9999999999877665432 1233444442 1 245899
Q ss_pred EEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
++||+|+...... |.+.+ +.++ +.+.+-.++|++||...+-.. | ..
T Consensus 81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~------------~-~~ 147 (243)
T d1q7ba_ 81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGN------------G-GQ 147 (243)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC------------T-TC
T ss_pred eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCC------------C-CC
Confidence 9999998654322 21111 1111 123456799999998754221 1 12
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC----CcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD----RGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~----~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
..|+.+|...+.+.+.. + +..+.||.+--+- .......+.+..+. .-+...+|+|.++...
T Consensus 148 ~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl------~R~~~pedvA~~v~fL 221 (243)
T d1q7ba_ 148 ANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPA------GRLGGAQEIANAVAFL 221 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTT------SSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCC------CCCCCHHHHHHHHHHH
Confidence 58999999998877653 2 5678998874321 00111122222222 1256788999887654
Q ss_pred h
Q 024143 271 S 271 (272)
Q Consensus 271 ~ 271 (272)
+
T Consensus 222 ~ 222 (243)
T d1q7ba_ 222 A 222 (243)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.97 E-value=1.1e-08 Score=85.19 Aligned_cols=164 Identities=10% Similarity=0.037 Sum_probs=103.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc--------cccCCCCEEEEecCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~--------~~~~~~D~Vi~~a~~~~ 154 (272)
.|++||||+ +-||+.++++|.++ |++|+..+|+++..++ .+.+.+..|. +.+.++|++||+|+...
T Consensus 4 gK~~lVTGas~GIG~aia~~l~~~--Ga~V~~~~r~~~~l~~---~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~ 78 (234)
T d1o5ia_ 4 DKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNEELLKR---SGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPK 78 (234)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHH---TCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHh---cCCcEEEcchHHHHHHHHHHhCCCcEEEecccccC
Confidence 478999996 89999999999999 9999999998765543 4445555553 24568999999998543
Q ss_pred CCC--------hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 024143 155 SLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKA 213 (272)
Q Consensus 155 ~~~--------~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~sk~~a 213 (272)
... |.+.+. .++ +.+.+..++|++||...+... .. ...|+.+|...
T Consensus 79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~-----------~~--~~~Y~asKaal 145 (234)
T d1o5ia_ 79 AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI-----------EN--LYTSNSARMAL 145 (234)
T ss_dssp CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TT--BHHHHHHHHHH
T ss_pred CcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc-----------cc--cccchhHHHHH
Confidence 221 211111 111 123456789999987643211 11 15788999998
Q ss_pred HHHHHHc-------C--eeEEeeCceecCCCcH-----HHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 214 EKVILEF-------G--GCVLRLAGLYKADRGA-----HVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 214 E~~l~~~-------~--~~IlRp~~iyG~~~~~-----~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
+.+.+.. + +-.+.||.+--+.... ....+.+..+.+ -+...+|+|.+++..+
T Consensus 146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~------R~~~pediA~~v~fL~ 211 (234)
T d1o5ia_ 146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMR------RMAKPEEIASVVAFLC 211 (234)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTS------SCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCC------CCcCHHHHHHHHHHHh
Confidence 8776653 2 4568899886543211 111222222222 2567889998876543
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.97 E-value=2.5e-08 Score=83.50 Aligned_cols=166 Identities=15% Similarity=0.094 Sum_probs=104.0
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc---c-----------ccCCCCEE
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-----------ATQKFPYV 146 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~---~-----------~~~~~D~V 146 (272)
..|++||||+ +-||+.++++|.++ |++|+..+|++++.+++.+ .+.+.+.+|. + ....+|++
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~--G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 81 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKE--GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV 81 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence 3478999996 88999999999999 9999999999877665433 3555555553 1 24579999
Q ss_pred EEecCCCCCCC--------hHHHHH-H----------HH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCCh
Q 024143 147 IFCAPPSRSLD--------YPGDVR-L----------AA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (272)
Q Consensus 147 i~~a~~~~~~~--------~~~~~~-~----------l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~ 205 (272)
||+|+...... |.+.+. + ++ +.+.+...++.+||....+. | ....
T Consensus 82 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~-------------~-~~~~ 147 (242)
T d1ulsa_ 82 VHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN-------------L-GQAN 147 (242)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC-------------T-TCHH
T ss_pred EECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCC-------------C-CCcc
Confidence 99998654321 222111 1 11 12344566777777542221 1 1258
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHHHHHHH
Q 024143 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIA 270 (272)
Q Consensus 206 y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a 270 (272)
|+.+|...+.+.+.. + +-.+.||.+--+-.. .....+.+..+.++ +...+|+|.+++..
T Consensus 148 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R------~~~pedia~~v~fL 219 (242)
T d1ulsa_ 148 YAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGR------AGKPLEVAYAALFL 219 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCS------CBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCC------CCCHHHHHHHHHHH
Confidence 999999998877653 2 567899998654321 12222333222221 45678888887654
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.97 E-value=1.7e-08 Score=85.20 Aligned_cols=131 Identities=11% Similarity=0.023 Sum_probs=85.6
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC--ceeeccCc---c-----------ccCCCC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~--i~~~~~d~---~-----------~~~~~D 144 (272)
.+||||+ +-||+.++++|.++ |++|+..+|++++.+.+ ...+ +..+.+|. + .+..+|
T Consensus 3 ValITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (255)
T d1gega_ 3 VALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 80 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEcCCccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 3589997 89999999999999 99999999998765543 2333 33344553 1 246899
Q ss_pred EEEEecCCCCCCC--------hHHHH-----------HHHH--HHhc-CCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWN-GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~-gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
++||+|+...... |.+.+ +.++ .... ...++|++||...+... | .
T Consensus 81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~------------~-~ 147 (255)
T d1gega_ 81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN------------P-E 147 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------T-T
T ss_pred EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccC------------c-c
Confidence 9999998644221 21111 1111 1223 35679999987643211 1 1
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCcee
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iy 231 (272)
...|+.+|...+.+.+.. + +-.+.||.+-
T Consensus 148 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~ 185 (255)
T d1gega_ 148 LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVK 185 (255)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCccc
Confidence 258999999998877653 2 4678898874
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.96 E-value=1.3e-08 Score=85.37 Aligned_cols=168 Identities=10% Similarity=0.005 Sum_probs=104.9
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---CceeeccCc---c-----------ccCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~i~~~~~d~---~-----------~~~~~ 143 (272)
+..|++||||+ +-||+.++++|.++ |++|+..+|++++.+.+... ....+.+|. + ....+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 81 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL 81 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 45588999996 89999999999999 99999999998776554321 233344442 1 24589
Q ss_pred CEEEEecCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
|++||+|+..... + |.+.+ +.++ +.+.+-.++|++||...+... | .
T Consensus 82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~------------~-~ 148 (244)
T d1nffa_ 82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT------------V-A 148 (244)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------T-T
T ss_pred eEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc------------c-c
Confidence 9999999864421 1 22111 1111 123456799999997753211 1 1
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
...|+.+|...+.+.+.. + +-.+-||.+.-+-.. ++.. .... ....-+...+|+|++++..+
T Consensus 149 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~----~~~~-~~~~--~pl~R~~~p~diA~~v~fL~ 219 (244)
T d1nffa_ 149 CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD----WVPE-DIFQ--TALGRAAEPVEVSNLVVYLA 219 (244)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT----TSCT-TCSC--CSSSSCBCHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHh----hhhH-HHHh--ccccCCCCHHHHHHHHHHHh
Confidence 258999999998877653 2 456889887543211 1111 0000 11122678899999876543
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.94 E-value=2.1e-08 Score=84.49 Aligned_cols=167 Identities=10% Similarity=-0.006 Sum_probs=104.0
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC--ceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~--i~~~~~d~---~-----------~~~ 141 (272)
..|.+||||+ +-||+.++++|.++ |++|+..+|++++.+.+ ...+ +..+..|. + ...
T Consensus 9 enKvalITGas~GIG~a~a~~la~~--Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g 86 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK 86 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 4467899996 88999999999999 99999999987765433 2233 33444442 1 246
Q ss_pred CCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
..|++||+|+...... |.+.+ +.++ +.+.+-.++|++||...+-.. |
T Consensus 87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~------------~ 154 (251)
T d2c07a1 87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN------------V 154 (251)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------T
T ss_pred CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC------------C
Confidence 8999999998643221 21111 1111 134456799999997754221 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc----HHHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~----~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
....|+.+|...+.+.+.. + +-.+.||.+--+-.. .....+.+..+.+ -+...+|+|+++
T Consensus 155 -~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~------R~~~pedvA~~v 227 (251)
T d2c07a1 155 -GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAG------RMGTPEEVANLA 227 (251)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTS------SCBCHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCC------CCcCHHHHHHHH
Confidence 1158999999999877654 2 567899988654321 1112233322222 156678999887
Q ss_pred HHH
Q 024143 268 FIA 270 (272)
Q Consensus 268 ~~a 270 (272)
+..
T Consensus 228 ~fL 230 (251)
T d2c07a1 228 CFL 230 (251)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.94 E-value=2.2e-08 Score=83.98 Aligned_cols=138 Identities=12% Similarity=0.106 Sum_probs=93.4
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc----------cccCCCCEEEEe
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT----------EATQKFPYVIFC 149 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~----------~~~~~~D~Vi~~ 149 (272)
+..|++||||+ +-||+.+++.|.++ |++|++.+|++++++++.+ .+++....|. +.+...|++||+
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~--G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ 81 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFARE--GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV 81 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEec
Confidence 34578999996 99999999999999 9999999999887766554 3455555443 135689999999
Q ss_pred cCCCCCCC--------hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHH
Q 024143 150 APPSRSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (272)
Q Consensus 150 a~~~~~~~--------~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (272)
++.....+ |...+. .++ ....+..++|++||... .. .+... ...|+.
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~--~~--------~~~~~--~~~Y~~ 149 (245)
T d2ag5a1 82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS--SV--------KGVVN--RCVYST 149 (245)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT--TT--------BCCTT--BHHHHH
T ss_pred ccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhh--cc--------CCccc--hhHHHH
Confidence 98654322 211111 111 13445679999998652 00 01111 158999
Q ss_pred HHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 209 VLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 209 sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
+|...|.+.+.. + +-.+.||.+-.+
T Consensus 150 sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~ 183 (245)
T d2ag5a1 150 TKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTP 183 (245)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECH
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEeeceeech
Confidence 999999887754 2 467899988643
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=98.93 E-value=2.3e-08 Score=83.96 Aligned_cols=137 Identities=13% Similarity=0.103 Sum_probs=88.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch--hhhhhCC--ceeeccCc---c-----------ccCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH--DELINMG--ITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~--~~l~~~~--i~~~~~d~---~-----------~~~~ 142 (272)
+..|.++|||+ +-||+.+++.|.++ |++|++.+|++.+. ..+...+ +..+..|. + .+.+
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~ 80 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGR 80 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 44578999996 99999999999999 99999999976532 1222333 33444443 1 2458
Q ss_pred CCEEEEecCCCCCCC--------hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|++||+|+...... |.+.+. .++ +.+.+-.++|++||....... |
T Consensus 81 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~------------~- 147 (247)
T d2ew8a1 81 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI------------E- 147 (247)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC------------S-
T ss_pred CCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC------------c-
Confidence 999999999754322 211111 111 134566799999997643211 1
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
....|+.+|...+.+.+.. + +-.+.||.+.-+
T Consensus 148 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~ 188 (247)
T d2ew8a1 148 AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTA 188 (247)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---
T ss_pred ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 1258999999988776653 2 466889988644
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.89 E-value=3.5e-08 Score=83.02 Aligned_cols=138 Identities=16% Similarity=0.096 Sum_probs=90.0
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h-CC--ceeeccCc---c-----------cc
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N-MG--ITPSLKWT---E-----------AT 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~-~~--i~~~~~d~---~-----------~~ 140 (272)
..|++||||+ +-||+.++++|.++ |++|+.++|++++..+.. . .+ +..+..|. + .+
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF 81 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4578999996 99999999999999 999999999876654322 1 12 33444553 1 24
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|++||+|+...... |.+.+. .++ +.+.+-.++|++||....... .
T Consensus 82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~-----------~ 150 (251)
T d1vl8a_ 82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT-----------M 150 (251)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC-----------S
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcccc-----------C
Confidence 58999999998644322 211111 111 123456799999986531100 0
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
+ ....|+.+|...+.+.+.. + +-.+.||.+--+.
T Consensus 151 ~-~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~ 193 (251)
T d1vl8a_ 151 P-NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM 193 (251)
T ss_dssp S-SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred c-cccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHH
Confidence 1 1258999999998877653 2 5678999886553
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.89 E-value=3.4e-08 Score=83.14 Aligned_cols=134 Identities=12% Similarity=0.069 Sum_probs=90.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC--CceeeccCc---c-----------ccCCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~--~i~~~~~d~---~-----------~~~~~D 144 (272)
+.-|++||||+ +-||+.+++.|.++ |++|+..+|++++.+.+... +...+.+|. + .+.++|
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLD 81 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 44578999996 89999999999999 99999999998877665442 344444553 1 245899
Q ss_pred EEEEecCCCCC-C---C-----hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRS-L---D-----YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 145 ~Vi~~a~~~~~-~---~-----~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
++||+|+.... . + |.+.+. .++ +.+. -.++|++||...+-.. | .
T Consensus 82 ilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~------------~-~ 147 (250)
T d1ydea1 82 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQ------------A-Q 147 (250)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCC------------T-T
T ss_pred EEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccc------------c-C
Confidence 99999985321 1 1 211111 111 1222 3699999998754321 1 1
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCcee
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iy 231 (272)
...|+.+|...+.+.+.. + +..+.||.+-
T Consensus 148 ~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~ 185 (250)
T d1ydea1 148 AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIW 185 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred cchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence 258999999988876653 2 5678999884
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.89 E-value=3.3e-08 Score=83.39 Aligned_cols=137 Identities=12% Similarity=0.006 Sum_probs=90.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc---c-----------ccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~---~-----------~~~~~D 144 (272)
..|++||||+ +-||+.++++|.++ |++|++.+|++++.+.+.. ..+..+..|. + ....+|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iD 81 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVRE--GARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSID 81 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHT--TEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 3468999996 99999999999999 9999999999877655432 1233444443 1 245899
Q ss_pred EEEEecCCCCCCC--------hHHHH-----------HHHH---HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~l~---~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~ 202 (272)
++||+|+...... |.+.+ +.++ .......++|++||...+-.. | .
T Consensus 82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------------~-~ 148 (256)
T d1k2wa_ 82 ILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE------------A-L 148 (256)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------T-T
T ss_pred EEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc------------c-c
Confidence 9999999654321 11111 1111 122345799999997743211 1 1
Q ss_pred CChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC
Q 024143 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (272)
Q Consensus 203 ~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~ 234 (272)
...|+.+|...+.+.+.. + +-.+.||.+-.+.
T Consensus 149 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~ 189 (256)
T d1k2wa_ 149 VGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH 189 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred ccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh
Confidence 258999999998877653 2 4678898876553
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.88 E-value=1.8e-08 Score=85.25 Aligned_cols=137 Identities=13% Similarity=0.051 Sum_probs=90.9
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC--ceeeccCc---c-----------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------AT 140 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~--i~~~~~d~---~-----------~~ 140 (272)
+.-|++||||+ +-||+.+++.|.++ |++|+.++|++++.+.+ ...+ +..+.+|. + ..
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF 80 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45578999996 99999999999999 99999999987765543 2233 33444542 1 24
Q ss_pred CCCCEEEEecCCCCC-CC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRS-LD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~-~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
..+|++||+|+.... .. |.+.+ +.++ +...+-.++|++||...+...
T Consensus 81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~----------- 149 (260)
T d1zema1 81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP----------- 149 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----------
T ss_pred CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC-----------
Confidence 589999999986432 11 21111 1111 123456799999997754211
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
| ....|+.+|...+.+.+.. + +..+.||.+--+
T Consensus 150 -~-~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 191 (260)
T d1zema1 150 -P-NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 191 (260)
T ss_dssp -T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred -c-chHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence 1 1258999999998877653 2 567889987543
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.85 E-value=4.7e-08 Score=82.40 Aligned_cols=168 Identities=13% Similarity=0.069 Sum_probs=103.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC--ceeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~--i~~~~~d~---~-----------~~~ 141 (272)
..|++||||+ +-||+.++++|.++ |++|+..+|++++.+++ ...+ +..+.+|. + .+.
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g 87 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3478999996 99999999999999 99999999987765443 3333 33444543 1 245
Q ss_pred CCCEEEEecCCCCCCC-------hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD-------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~-------~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
.+|++||+|+...... |.+.+. .++ ..+.+-.++|++||...+... |
T Consensus 88 ~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~------------~- 154 (255)
T d1fmca_ 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN------------I- 154 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC------------T-
T ss_pred CCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc------------c-
Confidence 8999999998643221 211111 111 123456689999987643211 1
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC----Cc-HHHHHHHcCcccCCCCcccccccHHHHHHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD----RG-AHVYWLQKGTVDSRPDHILNLIHYEVNTLVL 267 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~----~~-~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai 267 (272)
....|+.+|...+.+.+.. + +-.+-||.+.-+. .. .....+.+..+.+ -+...+|+|.++
T Consensus 155 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~------R~g~pedvA~~v 228 (255)
T d1fmca_ 155 NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR------RLGQPQDIANAA 228 (255)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSC------SCBCHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCC------CCcCHHHHHHHH
Confidence 1258999999988776653 2 4678899885331 01 1111222222222 145678998887
Q ss_pred HHHh
Q 024143 268 FIAS 271 (272)
Q Consensus 268 ~~a~ 271 (272)
+..+
T Consensus 229 ~fL~ 232 (255)
T d1fmca_ 229 LFLC 232 (255)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6543
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.85 E-value=1.2e-07 Score=81.20 Aligned_cols=172 Identities=11% Similarity=-0.051 Sum_probs=101.9
Q ss_pred CCCcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h---CCceeeccCc---c---------
Q 024143 79 SGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N---MGITPSLKWT---E--------- 138 (272)
Q Consensus 79 ~~~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~---~~i~~~~~d~---~--------- 138 (272)
+..+..|++||||+ |-||+.++++|.++ |++|++++|+.++..... . ..+..+..|. +
T Consensus 20 ~~~l~gK~alITGas~GIG~aiA~~la~~--Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~ 97 (294)
T d1w6ua_ 20 PNSFQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL 97 (294)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhh
Confidence 34566689999996 99999999999999 999999999976644322 1 1233333442 1
Q ss_pred --ccCCCCEEEEecCCCCCCC--------hHHHHH-H------H----H---HHhcCCCeEEEEecceeecCCCCCCCCC
Q 024143 139 --ATQKFPYVIFCAPPSRSLD--------YPGDVR-L------A----A---LSWNGEGSFLFTSSSAIYDCSDNGACDE 194 (272)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~~~--------~~~~~~-~------l----~---~~~~gvkr~V~~SS~~vYg~~~~~~~~E 194 (272)
....+|++||+|+...... +.+... + + . ....+...++.+||.......
T Consensus 98 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~------- 170 (294)
T d1w6ua_ 98 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS------- 170 (294)
T ss_dssp HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-------
T ss_pred hhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc-------
Confidence 2468999999998754322 111110 0 0 0 112334566777665432211
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc-------HHHHHHHcCcccCCCCcccccc
Q 024143 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-------AHVYWLQKGTVDSRPDHILNLI 258 (272)
Q Consensus 195 ~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~-------~~~~~l~~g~~~~~~~~~~~~I 258 (272)
| ....|+.+|...+.+.+.. + +-.+.||.+--+... .....+.+..+.+ -+.
T Consensus 171 -----~-~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~------R~~ 238 (294)
T d1w6ua_ 171 -----G-FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG------RLG 238 (294)
T ss_dssp -----T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS------SCB
T ss_pred -----c-ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC------CCC
Confidence 1 1157999999999887754 2 457899988543211 1111222222222 245
Q ss_pred cHHHHHHHHHHHh
Q 024143 259 HYEVNTLVLFIAS 271 (272)
Q Consensus 259 ~v~Dva~ai~~a~ 271 (272)
..+|+|.++...+
T Consensus 239 ~pediA~~v~fL~ 251 (294)
T d1w6ua_ 239 TVEELANLAAFLC 251 (294)
T ss_dssp CHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHh
Confidence 6799998876543
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.84 E-value=6.9e-08 Score=81.51 Aligned_cols=168 Identities=14% Similarity=0.056 Sum_probs=102.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCCc--eeeccCc---c-----------cc-
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMGI--TPSLKWT---E-----------AT- 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~i--~~~~~d~---~-----------~~- 140 (272)
..|++||||+ +-||+.++++|.++ |++|+.++|++++.+++ ...+. ..+..|. + ..
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~--G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~ 82 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 82 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 4578999996 99999999999999 99999999997665443 22332 2334442 1 22
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
...|++||+|+...... |.+.+ +.+. ....+..++|++||.......
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~------------ 150 (258)
T d1ae1a_ 83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL------------ 150 (258)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC------------
T ss_pred CCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc------------
Confidence 25899999998644321 21111 1111 134467799999998753211
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH----------HHHHHHcCcccCCCCcccccccH
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----------HVYWLQKGTVDSRPDHILNLIHY 260 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~----------~~~~l~~g~~~~~~~~~~~~I~v 260 (272)
| ....|+.+|...+.+.+.. + +-.+.||.+.-+.... ....+....+. .-+...
T Consensus 151 ~-~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl------gR~~~p 223 (258)
T d1ae1a_ 151 P-SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM------GRAGKP 223 (258)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT------CSCBCH
T ss_pred c-cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC------CCCcCH
Confidence 1 1258999999998877654 2 4578999987543111 11111111111 126788
Q ss_pred HHHHHHHHHHh
Q 024143 261 EVNTLVLFIAS 271 (272)
Q Consensus 261 ~Dva~ai~~a~ 271 (272)
+|+|.+++..+
T Consensus 224 ediA~~v~fL~ 234 (258)
T d1ae1a_ 224 QEVSALIAFLC 234 (258)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999876544
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.83 E-value=6.6e-08 Score=81.47 Aligned_cols=132 Identities=10% Similarity=-0.001 Sum_probs=86.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC--ceeeccCc---c-----------ccCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~--i~~~~~d~---~-----------~~~~~ 143 (272)
|.+||||+ +-||+.++++|.++ |++|++.+|++++.+++ ...+ +..+..|. + .+..+
T Consensus 3 KValITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i 80 (257)
T d2rhca1 3 EVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 80 (257)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 45689996 89999999999999 99999999997765543 2333 33344442 1 24589
Q ss_pred CEEEEecCCCCCCC--------hHHHH-----------HHHH----HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA----LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~l~----~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
|++||+|+...... |.+.+ +.++ +...+..++|++||...+-.. |
T Consensus 81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~------------~ 148 (257)
T d2rhca1 81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV------------V 148 (257)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC------------T
T ss_pred CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc------------c
Confidence 99999998654321 21111 1111 122345689999987643211 1
Q ss_pred CCCChHHHHHHHHHHHHHHc----C-----eeEEeeCcee
Q 024143 201 IGRSPRTDVLLKAEKVILEF----G-----GCVLRLAGLY 231 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~----~-----~~IlRp~~iy 231 (272)
....|+.+|...+.+.+.. + +-.+.||.+-
T Consensus 149 -~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~ 187 (257)
T d2rhca1 149 -HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVE 187 (257)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBC
T ss_pred -cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCC
Confidence 1258999999988877653 2 4568898874
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.83 E-value=4.3e-08 Score=82.79 Aligned_cols=135 Identities=13% Similarity=0.062 Sum_probs=88.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC----CceeeccCc---c-----------c
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM----GITPSLKWT---E-----------A 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~----~i~~~~~d~---~-----------~ 139 (272)
..|++||||+ +-||+.++++|.++ |++|+..+|++++.+... .. .+..+.+|. + .
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 80 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 4478999996 89999999999999 999999999877654332 11 233344442 1 2
Q ss_pred cCCCCEEEEecCCCCC-C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~-~---~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
+..+|++||+|+.... . + |.+.+ +.++ +...+-.++|++||...+-..
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------- 150 (258)
T d1iy8a_ 81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI---------- 150 (258)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC----------
T ss_pred hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC----------
Confidence 4589999999985421 1 1 21111 1111 134467799999997643211
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceec
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG 232 (272)
| ....|+.+|...+.+.+.. + +..+.||.+.-
T Consensus 151 --~-~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T 191 (258)
T d1iy8a_ 151 --G-NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWT 191 (258)
T ss_dssp --S-SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred --C-CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccC
Confidence 1 1258999999988776543 2 56689998853
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.80 E-value=3.6e-08 Score=83.18 Aligned_cols=134 Identities=14% Similarity=-0.014 Sum_probs=90.0
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---CceeeccCc---c-----------ccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT---E-----------ATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~i~~~~~d~---~-----------~~~~~D 144 (272)
..|++||||+ +-||+.++++|.++ |++|+..+|++++...+.+. .+..+..|. + .+..+|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCcc
Confidence 3478999996 88999999999999 99999999998776554322 233444442 1 245899
Q ss_pred EEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
++||+|+...... |.+.+ +.++ +...+-.++|++||...+... | ..
T Consensus 82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~------------~-~~ 148 (254)
T d1hdca_ 82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL------------A-LT 148 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------T-TC
T ss_pred EEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc------------c-ch
Confidence 9999998654321 21111 1111 124456799999997743211 1 12
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCcee
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iy 231 (272)
..|+.+|...+.+.+.. + +-.+-||.+.
T Consensus 149 ~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~ 185 (254)
T d1hdca_ 149 SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTY 185 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCccc
Confidence 58999999998877653 2 4668888874
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.80 E-value=8e-08 Score=80.76 Aligned_cols=172 Identities=9% Similarity=-0.031 Sum_probs=100.9
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCceeeccCc---c-----------ccC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~---~-----------~~~ 141 (272)
+..|++||||+ +-||+.++++|.++ |++|+..+|++++.+.+.+ ..+..+..|. + .+.
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG 81 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 45578999996 99999999999999 9999999998776654332 1244444553 1 245
Q ss_pred CCCEEEEecCCCCCCC--------hHHHHH-----------HHH--HHhcCC-CeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSLD--------YPGDVR-----------LAA--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~~-----------~l~--~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
++|++||+|+...... |.+.+. .++ +.+.+. .++|++||...+-. .
T Consensus 82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~------------~ 149 (251)
T d1zk4a1 82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG------------D 149 (251)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC------------C
T ss_pred CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc------------C
Confidence 8999999998654321 221111 111 123343 48899999764211 0
Q ss_pred CCCCChHHHHHHHHHHHHHH---------cC--eeEEeeCceecCCCc--HHHHHHHcCcccCCCCcccccccHHHHHHH
Q 024143 200 PIGRSPRTDVLLKAEKVILE---------FG--GCVLRLAGLYKADRG--AHVYWLQKGTVDSRPDHILNLIHYEVNTLV 266 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~---------~~--~~IlRp~~iyG~~~~--~~~~~l~~g~~~~~~~~~~~~I~v~Dva~a 266 (272)
|. ...|+.+|...+.+.+. .+ +-.+.||.+.-+-.. +......... ......-+...+|+|.+
T Consensus 150 ~~-~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~---~~~pl~R~~~pedvA~~ 225 (251)
T d1zk4a1 150 PS-LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQR---TKTPMGHIGEPNDIAYI 225 (251)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTST---TTCTTSSCBCHHHHHHH
T ss_pred CC-chhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHH---hCCCCCCCcCHHHHHHH
Confidence 11 25899999887765432 23 456889988532100 0000011100 00111125678999998
Q ss_pred HHHHh
Q 024143 267 LFIAS 271 (272)
Q Consensus 267 i~~a~ 271 (272)
++..+
T Consensus 226 v~fL~ 230 (251)
T d1zk4a1 226 CVYLA 230 (251)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76543
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.79 E-value=7.4e-08 Score=81.35 Aligned_cols=134 Identities=14% Similarity=0.056 Sum_probs=88.1
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCCc--eeeccCc---c-----------ccC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMGI--TPSLKWT---E-----------ATQ 141 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~i--~~~~~d~---~-----------~~~ 141 (272)
..|++||||+ +-||+.++++|.++ |++|+..+|++++.+++ ...+. ..+..|. + .+.
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 84 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 3578999996 89999999999999 99999999987766543 22232 3334442 1 233
Q ss_pred -CCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 142 -KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 142 -~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.+|++||+|+...... |.+.+ +.++ +.+.+-.++|++||.......
T Consensus 85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~------------ 152 (259)
T d2ae2a_ 85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV------------ 152 (259)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC------------
T ss_pred CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccc------------
Confidence 5899999998644321 21111 1111 133456799999997642110
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCcee
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iy 231 (272)
| ....|+.+|...+.+.+.. + +-.+.||.+-
T Consensus 153 ~-~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~ 192 (259)
T d2ae2a_ 153 P-YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIA 192 (259)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBC
T ss_pred c-cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCccc
Confidence 1 1258999999988877653 2 4568898875
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.79 E-value=3.6e-08 Score=83.23 Aligned_cols=172 Identities=15% Similarity=0.103 Sum_probs=99.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC----ceeeccCc---c-----------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG----ITPSLKWT---E----------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~----i~~~~~d~---~----------- 138 (272)
+..|.+||||+ +-||+++++.|.++ |++|+..+|++++.+++ ...+ +..+.+|. +
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~ 85 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 85 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 34578999997 99999999999999 99999999998776543 3222 23344543 1
Q ss_pred ccCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhc--CCCeEEEEecceeecCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWN--GEGSFLFTSSSAIYDCSDNGACDED 195 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~--gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (272)
...++|++||+|+...... |.+.+ +.++ .... +..++|++||..-+...
T Consensus 86 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~-------- 157 (257)
T d1xg5a_ 86 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL-------- 157 (257)
T ss_dssp HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC--------
T ss_pred hcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC--------
Confidence 2468999999998643221 11111 1111 1122 35799999997743211
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc---------C--eeEEeeCceecCCCcHHHHHHHcCcc--cCCCCcccccccHHH
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF---------G--GCVLRLAGLYKADRGAHVYWLQKGTV--DSRPDHILNLIHYEV 262 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~---------~--~~IlRp~~iyG~~~~~~~~~l~~g~~--~~~~~~~~~~I~v~D 262 (272)
|... ...|+.+|...+.+.+.+ + +..+-|+.+=.+ +...+..... .........++..+|
T Consensus 158 -p~~~--~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~----~~~~~~~~~~~~~~~~~~~~r~~~ped 230 (257)
T d1xg5a_ 158 -PLSV--THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ----FAFKLHDKDPEKAAATYEQMKCLKPED 230 (257)
T ss_dssp -SCGG--GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS----HHHHHTTTCHHHHHHHHC---CBCHHH
T ss_pred -CCcc--cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCCh----hhhhcChhhHHHHHhcCCCCCCcCHHH
Confidence 1101 146999999888765422 2 356677765321 1111111111 000001122567889
Q ss_pred HHHHHHHH
Q 024143 263 NTLVLFIA 270 (272)
Q Consensus 263 va~ai~~a 270 (272)
+|++++..
T Consensus 231 vA~~v~fL 238 (257)
T d1xg5a_ 231 VAEAVIYV 238 (257)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887654
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.76 E-value=3.9e-08 Score=82.68 Aligned_cols=133 Identities=14% Similarity=0.036 Sum_probs=87.7
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCc---eeeccCc-----------cccCCCCEEEEec
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI---TPSLKWT-----------EATQKFPYVIFCA 150 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i---~~~~~d~-----------~~~~~~D~Vi~~a 150 (272)
+.||||+ +-||+.++++|.++ |++|++.+|+.++.+++..... .....+. +.+.++|++||+|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNA 79 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND 79 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 6899997 89999999999999 9999999998877766543221 1122221 1345899999999
Q ss_pred CCCC-CCC--------hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHH
Q 024143 151 PPSR-SLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (272)
Q Consensus 151 ~~~~-~~~--------~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (272)
+... ... |.+.+. .++ +.+.+-.++|++||...+... |. ...|+.
T Consensus 80 g~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~------------~~-~~~Y~a 146 (252)
T d1zmta1 80 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW------------KE-LSTYTS 146 (252)
T ss_dssp CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC------------TT-CHHHHH
T ss_pred cCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc------------cc-cccccc
Confidence 7532 111 222111 111 134456799999997643211 11 258999
Q ss_pred HHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 209 VLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 209 sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
+|...+.+.+.. + +-.+.||.+-.+
T Consensus 147 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~ 180 (252)
T d1zmta1 147 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSE 180 (252)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCB
T ss_pred ccccHHHHHHHHHHHhcccCcEEEEEecCCCcCc
Confidence 999988877653 2 567899988654
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.76 E-value=1.1e-07 Score=80.12 Aligned_cols=135 Identities=10% Similarity=0.021 Sum_probs=87.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC-cchhhhh----h---CCceeeccCc---c-----------cc
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELI----N---MGITPSLKWT---E-----------AT 140 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~-~~~~~l~----~---~~i~~~~~d~---~-----------~~ 140 (272)
.|++||||+ +-||+.++++|.++ |++|+...|+. +..+.+. . ..+..+..|. + ..
T Consensus 4 gK~alITGas~GIG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 4 GKVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 467899996 89999999999999 99999999974 3333221 1 1234444443 1 24
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
.++|++||+|+...... |.+.+ +.++ +.+.+-.++|++||...+...
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~------------ 149 (260)
T d1x1ta1 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS------------ 149 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------
T ss_pred CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceecc------------
Confidence 58999999999654321 21111 1111 133456799999998743211
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
| ....|+.+|...+.+.+.. + +..+.||.+--+
T Consensus 150 ~-~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 191 (260)
T d1x1ta1 150 A-NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTP 191 (260)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred C-CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCCh
Confidence 1 1258999999998877653 2 567899988544
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.76 E-value=5.9e-08 Score=83.64 Aligned_cols=139 Identities=9% Similarity=0.054 Sum_probs=88.3
Q ss_pred CCCcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hh-------CCceeeccCc---c-----
Q 024143 79 SGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN-------MGITPSLKWT---E----- 138 (272)
Q Consensus 79 ~~~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~-------~~i~~~~~d~---~----- 138 (272)
|..+..|++||||+ +-||+.++++|.++ |++|++.+|++++.+.. .. ..+..+.+|. +
T Consensus 7 ~g~L~gKvalITGas~GIG~aia~~la~~--Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~ 84 (297)
T d1yxma1 7 PGLLQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL 84 (297)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHH
Confidence 44566789999996 89999999999999 99999999987665432 21 1233344443 1
Q ss_pred ------ccCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCC
Q 024143 139 ------ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGA 191 (272)
Q Consensus 139 ------~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~ 191 (272)
....+|++||+|+...... |...+ +.++ +...+-.++|.+|+....+.
T Consensus 85 ~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~----- 159 (297)
T d1yxma1 85 VKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF----- 159 (297)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC-----
T ss_pred HHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc-----
Confidence 2458999999998643321 11111 1111 12334567887765432110
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 192 CDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 192 ~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
|. ...|+.+|...+.+.+.. + +-.+.||.+.-+
T Consensus 160 --------~~-~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 201 (297)
T d1yxma1 160 --------PL-AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQ 201 (297)
T ss_dssp --------TT-CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred --------cc-cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCc
Confidence 11 258999999998877653 2 467899988654
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.75 E-value=1.6e-07 Score=78.29 Aligned_cols=159 Identities=13% Similarity=0.067 Sum_probs=98.8
Q ss_pred EEEEcC-cHHHHHHHHHHHhcCCCCe-------EEEEecCCcchhhhh----hCCc--eeeccCc---c-----------
Q 024143 87 LLIVGP-GVLGRLVAEQWRQEHPGCQ-------IYGQTMTADHHDELI----NMGI--TPSLKWT---E----------- 138 (272)
Q Consensus 87 IlItGa-GfiG~~l~~~L~~~~~g~~-------V~~~~R~~~~~~~l~----~~~i--~~~~~d~---~----------- 138 (272)
|||||+ +-||+.++++|.++ |++ |+...|++++.+.+. ..+. ..+.+|. +
T Consensus 4 vlITGas~GIG~aia~~la~~--G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 4 LLITGAGKGIGRAIALEFARA--ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEETTTSHHHHHHHHHHHHH--TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEccCCCHHHHHHHHHHHHh--CccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 789996 88999999999999 987 888999877665442 2332 3334442 1
Q ss_pred ccCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
....+|++||+|+...... |.+.+ +.++ +.+.+-.++|++||...+...
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------- 151 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF---------- 151 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC----------
Confidence 2458999999998654321 21111 1111 134456799999998743211
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
| ....|+.+|...+.+.+.. + +..+.||.+--+-. + .. ..+....+...+|+|++++
T Consensus 152 --~-~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~--------~-~~--~~~~~~~~~~PedvA~~v~ 217 (240)
T d2bd0a1 152 --R-HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMW--------G-KV--DDEMQALMMMPEDIAAPVV 217 (240)
T ss_dssp --T-TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTT--------C-CC--CSTTGGGSBCHHHHHHHHH
T ss_pred --C-CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchh--------h-hc--CHhhHhcCCCHHHHHHHHH
Confidence 1 1258999999888766543 2 56788988753321 0 11 0111122455789998887
Q ss_pred HHh
Q 024143 269 IAS 271 (272)
Q Consensus 269 ~a~ 271 (272)
..+
T Consensus 218 ~l~ 220 (240)
T d2bd0a1 218 QAY 220 (240)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=98.74 E-value=2.4e-07 Score=78.19 Aligned_cols=167 Identities=13% Similarity=0.008 Sum_probs=100.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCc-chh----hhhhCCc--eeeccCc---c-----------cc
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHD----ELINMGI--TPSLKWT---E-----------AT 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~-~~~----~l~~~~i--~~~~~d~---~-----------~~ 140 (272)
..|+++|||+ +-||+.++++|.++ |++|++..|+.+ ..+ .+...+. ..+..|. + ..
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3478999996 89999999999999 999999999754 222 2333333 3334442 1 24
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.++|++||+|+...... |.+.+ +.++ +.+.+ -..+|++||...+-.
T Consensus 84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~------------ 151 (261)
T d1geea_ 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP------------ 151 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC------------
T ss_pred CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc------------
Confidence 58999999998654321 21111 1111 12344 446889998763211
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHHHH
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYEVN 263 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~Dv 263 (272)
.|. ...|+.+|...+.+.+.. + +..+.||.+.-+-... ....+.+..+.+ -+...+|+
T Consensus 152 ~~~-~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~pedi 224 (261)
T d1geea_ 152 WPL-FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG------YIGEPEEI 224 (261)
T ss_dssp CTT-CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS------SCBCHHHH
T ss_pred Ccc-ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC------CCCCHHHH
Confidence 111 258999999998877653 2 5678999886442111 111122222221 14567899
Q ss_pred HHHHHHH
Q 024143 264 TLVLFIA 270 (272)
Q Consensus 264 a~ai~~a 270 (272)
|++++..
T Consensus 225 A~~v~fL 231 (261)
T d1geea_ 225 AAVAAWL 231 (261)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887654
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.74 E-value=3.8e-07 Score=77.11 Aligned_cols=138 Identities=15% Similarity=0.138 Sum_probs=89.9
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C-CceeeccCc---c-----------ccC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-GITPSLKWT---E-----------ATQ 141 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~-~i~~~~~d~---~-----------~~~ 141 (272)
+..|++||||+ +-||+.++++|.++ |++|+.++|++++.+++.. . .+..+..|. + ...
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG 81 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 44578999996 88999999999999 9999999998776654432 1 233344442 1 245
Q ss_pred CCCEEEEecCCCCCC-----C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 142 KFPYVIFCAPPSRSL-----D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 142 ~~D~Vi~~a~~~~~~-----~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
.+|++||+|+..... + |...+ +.++ +...+-.++|++||...+-...
T Consensus 82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~---------- 151 (268)
T d2bgka1 82 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE---------- 151 (268)
T ss_dssp CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------
T ss_pred CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc----------
Confidence 899999999853211 1 11111 1111 1234567999999876432110
Q ss_pred CCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
+. ...|+.+|...+.+.+.. + +-.+.||.+..+
T Consensus 152 -~~-~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 193 (268)
T d2bgka1 152 -GV-SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASP 193 (268)
T ss_dssp -TS-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCC
T ss_pred -cc-ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccCh
Confidence 11 137999999998877653 2 567899988655
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.73 E-value=4.2e-08 Score=82.27 Aligned_cols=135 Identities=15% Similarity=0.080 Sum_probs=88.3
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----C--CceeeccCc---c-----------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--GITPSLKWT---E-----------AT 140 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~--~i~~~~~d~---~-----------~~ 140 (272)
+..+.++|||+ +-||++++++|.++ |++|+..+|++++++.+.. . .+..+.+|. + ..
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~--G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 82 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 82 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 34478999997 89999999999999 9999999999877654432 2 233444553 1 34
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
..+|++||+|+...... +.+.+ +.++ +.+.+-.++|++||...+-..
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~------------ 150 (244)
T d1yb1a_ 83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV------------ 150 (244)
T ss_dssp CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH------------
T ss_pred CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC------------
Confidence 57999999999754321 11111 1111 134567799999998753211
Q ss_pred CCCCChHHHHHHHHHHHHHHc----------C--eeEEeeCcee
Q 024143 200 PIGRSPRTDVLLKAEKVILEF----------G--GCVLRLAGLY 231 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~----------~--~~IlRp~~iy 231 (272)
|. ...|+.+|.+.+.+.+.. | +..+.||++-
T Consensus 151 ~~-~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~ 193 (244)
T d1yb1a_ 151 PF-LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVN 193 (244)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHH
T ss_pred CC-cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCC
Confidence 11 157999998876554431 2 5678888763
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.69 E-value=1.2e-07 Score=80.09 Aligned_cols=136 Identities=19% Similarity=0.150 Sum_probs=83.2
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hC--CceeeccCc---c-----------cc-
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------AT- 140 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~--~i~~~~~d~---~-----------~~- 140 (272)
..|++||||+ +-||+.++++|.++ |++|+.++|++++++++. .. .+..+..|. + .+
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 84 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 4578999996 99999999999999 999999999977665432 22 233444442 1 12
Q ss_pred CCCCEEEEecCCCCCC---C-----hHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSL---D-----YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
..+|++||+|+..... + |.+.+. .++ +...+-.++|++||....-..
T Consensus 85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~------------ 152 (259)
T d1xq1a_ 85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA------------ 152 (259)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------
T ss_pred CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc------------
Confidence 3589999999864321 1 211111 111 134566799999997643211
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
| ....|+.+|...+.+.+.. + +-.+-||.+--+
T Consensus 153 ~-~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~ 194 (259)
T d1xq1a_ 153 S-VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATP 194 (259)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--
T ss_pred c-ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCH
Confidence 1 1258999999998877653 2 457889887544
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.65 E-value=4.1e-07 Score=75.95 Aligned_cols=164 Identities=11% Similarity=-0.021 Sum_probs=98.2
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEec-CCcchhhh----hhCC--ceeeccCc---c-----------ccCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDEL----INMG--ITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~~~l----~~~~--i~~~~~d~---~-----------~~~~ 142 (272)
|-+||||+ +-||+.++++|.++ |++|+..++ +++..+.+ ...+ +..+..|. + ...+
T Consensus 2 pV~lITGas~GIG~a~a~~la~~--Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 79 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 35889996 89999999999999 999988754 44443332 2223 23334442 1 2458
Q ss_pred CCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCC
Q 024143 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (272)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~ 201 (272)
+|++||+|+...... |.+.+ +.++ +.+.+-.++|++||...+-.. |
T Consensus 80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~------------~- 146 (244)
T d1edoa_ 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN------------I- 146 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------T-
T ss_pred CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCC------------C-
Confidence 999999998654321 21111 1111 133466799999998754221 1
Q ss_pred CCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCC----CcHHHHHHHcCcccCCCCcccccccHHHHHHHHH
Q 024143 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD----RGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLF 268 (272)
Q Consensus 202 ~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~----~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~ 268 (272)
....|+.+|...+.+.+.. + +..+.||.+--+- .......+.+..+.+ -+...+|+|++++
T Consensus 147 ~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~------R~~~p~dvA~~v~ 220 (244)
T d1edoa_ 147 GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLG------RTGQPENVAGLVE 220 (244)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTC------SCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCC------CCcCHHHHHHHHH
Confidence 1158999999998877653 3 5678898874321 001111222222221 2566789998876
Q ss_pred H
Q 024143 269 I 269 (272)
Q Consensus 269 ~ 269 (272)
.
T Consensus 221 f 221 (244)
T d1edoa_ 221 F 221 (244)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.65 E-value=2.4e-07 Score=78.84 Aligned_cols=134 Identities=18% Similarity=0.137 Sum_probs=86.4
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---CceeeccCc--------------cccCCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT--------------EATQKFP 144 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~i~~~~~d~--------------~~~~~~D 144 (272)
.-|++||||+ +-||+.++++|.++ |++|+.++|++++++++... .+..+..|. +....+|
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 81 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAE--GAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKID 81 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcc
Confidence 3478999996 99999999999999 99999999998776654321 233444442 1245899
Q ss_pred EEEEecCCCCCC--------C-----hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCC
Q 024143 145 YVIFCAPPSRSL--------D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (272)
Q Consensus 145 ~Vi~~a~~~~~~--------~-----~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~ 198 (272)
++||+|+..... + |.+.+ +.++ +.+.+ .++|++||...+-..
T Consensus 82 ilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~----------- 149 (276)
T d1bdba_ 82 TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPN----------- 149 (276)
T ss_dssp EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTT-----------
T ss_pred cccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCC-----------
Confidence 999999853211 1 11111 0111 11223 688998886532110
Q ss_pred CCCCCChHHHHHHHHHHHHHHc----C----eeEEeeCceec
Q 024143 199 VPIGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYK 232 (272)
Q Consensus 199 ~p~~~~~y~~sk~~aE~~l~~~----~----~~IlRp~~iyG 232 (272)
| ....|+.+|...+.+.+.. + +-.+.||.+--
T Consensus 150 -~-~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T 189 (276)
T d1bdba_ 150 -G-GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINS 189 (276)
T ss_dssp -S-SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCS
T ss_pred -C-CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEec
Confidence 1 1257999999988876653 2 45688988743
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.65 E-value=2.2e-07 Score=78.34 Aligned_cols=144 Identities=13% Similarity=0.021 Sum_probs=87.8
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-----h--CCceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----N--MGITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-----~--~~i~~~~~d~---~-----------~ 139 (272)
+..|++||||+ +-||+.++++|.++ |++|+.++|+.++..++. . ..+..+.+|. + .
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD 84 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 34578999996 99999999999999 999999999987654332 1 1234444553 1 2
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH---HHhcCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~---~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
+..+|++||+|+...... |.+.+ +.++ ....+..+++..||...+...... +. +
T Consensus 85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~-~~---~ 160 (260)
T d1h5qa_ 85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-LN---G 160 (260)
T ss_dssp SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-TT---E
T ss_pred hCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc-cc---c
Confidence 458999999998643321 21111 1111 123345566666665543211000 00 0
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
.| ....|+.+|...+.+.+.. + +-.+.||.+--+
T Consensus 161 -~~-~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~ 203 (260)
T d1h5qa_ 161 -SL-TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTD 203 (260)
T ss_dssp -EC-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCG
T ss_pred -Cc-cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCc
Confidence 01 1257999999998876653 2 466889988543
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.64 E-value=2.7e-07 Score=77.91 Aligned_cols=137 Identities=15% Similarity=0.102 Sum_probs=83.4
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC-----ceeeccCc---c----------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWT---E---------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~-----i~~~~~d~---~---------- 138 (272)
+..|.+||||+ +-||+.++++|.++ |++|+..+|++++.+++. ..+ +..+..|. +
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~ 80 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL 80 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence 34578899996 99999999999999 999999999977655432 222 44445553 1
Q ss_pred -ccCCCCEEEEecCCCCCC------------ChHHHHH-----------HHHH-HhcCCCeEEEEeccee-ecCCCCCCC
Q 024143 139 -ATQKFPYVIFCAPPSRSL------------DYPGDVR-----------LAAL-SWNGEGSFLFTSSSAI-YDCSDNGAC 192 (272)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~------------~~~~~~~-----------~l~~-~~~gvkr~V~~SS~~v-Yg~~~~~~~ 192 (272)
...++|++||+|+..... +|.+.+. .++. -..+..++|.++|... +..
T Consensus 81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~------ 154 (264)
T d1spxa_ 81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA------ 154 (264)
T ss_dssp HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC------
T ss_pred HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccccc------
Confidence 245899999999853210 0211111 1110 1122346666665432 111
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecC
Q 024143 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (272)
Q Consensus 193 ~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~ 233 (272)
.|. ...|+.+|...+.+.+.. + +..+.||.+--+
T Consensus 155 ------~~~-~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~ 197 (264)
T d1spxa_ 155 ------TPD-FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATG 197 (264)
T ss_dssp ------CTT-SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCC
T ss_pred ------CCC-chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 011 147999999988777653 2 567899988543
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.64 E-value=3.2e-07 Score=77.07 Aligned_cols=135 Identities=8% Similarity=-0.007 Sum_probs=88.9
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-------CCceeeccCc---------------cc
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPSLKWT---------------EA 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-------~~i~~~~~d~---------------~~ 139 (272)
..|+|||||+ +-||..++++|.++ |++|+++.|..++...+.+ .++.....|. +.
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~--G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence 4578999996 89999999999999 9999999887766543321 1233333332 02
Q ss_pred cCCCCEEEEecCCCCCCChHHHH-----------HHHH--H--Hhc-CCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLDYPGDV-----------RLAA--L--SWN-GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~~~~~~-----------~~l~--~--~~~-gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
...+|++|++|+....+++.+.+ +.++ + .+. ...++|++||...+... | ..
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~------------~-~~ 148 (254)
T d1sbya1 82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI------------H-QV 148 (254)
T ss_dssp HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------------T-TS
T ss_pred cCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC------------C-CC
Confidence 45899999999976655432221 1111 1 122 24689999987753211 1 12
Q ss_pred ChHHHHHHHHHHHHHHc-------C--eeEEeeCceec
Q 024143 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG 232 (272)
..|+.+|.....+.+.+ + +..+.||.+.-
T Consensus 149 ~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T 186 (254)
T d1sbya1 149 PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRT 186 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEES
T ss_pred HHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcC
Confidence 58999999888766543 3 56789999864
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.61 E-value=5.2e-07 Score=75.28 Aligned_cols=137 Identities=12% Similarity=0.003 Sum_probs=85.5
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHh---cCCCCeEEEEecCCcchhhhhh-----CCceeeccCc---c------------
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQ---EHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E------------ 138 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~---~~~g~~V~~~~R~~~~~~~l~~-----~~i~~~~~d~---~------------ 138 (272)
+||+|||||+ +-||+.++++|++ + |++|++..|++++.+.+.+ ..+..+..|. +
T Consensus 1 ~MKtilITGas~GIG~a~a~~l~~~a~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 78 (248)
T d1snya_ 1 HMNSILITGCNRGLGLGLVKALLNLPQP--PQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV 78 (248)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSC--CSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence 4899999997 8899999999974 5 9999999999887765532 2344454442 1
Q ss_pred -ccCCCCEEEEecCCCCCC----C-----hHHHH-----------HHHH---HHh----------cCCCeEEEEecceee
Q 024143 139 -ATQKFPYVIFCAPPSRSL----D-----YPGDV-----------RLAA---LSW----------NGEGSFLFTSSSAIY 184 (272)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~----~-----~~~~~-----------~~l~---~~~----------~gvkr~V~~SS~~vY 184 (272)
....+|++||+|+..... + +.+.+ +.++ .+. .+..++|.+||..
T Consensus 79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~-- 156 (248)
T d1snya_ 79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL-- 156 (248)
T ss_dssp HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG--
T ss_pred hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccc--
Confidence 124699999999853321 1 11111 1111 110 1356899999864
Q ss_pred cCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCcee
Q 024143 185 DCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (272)
Q Consensus 185 g~~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iy 231 (272)
+.... .+ .| ....|+.+|.....+.+.. + +..+.||.+-
T Consensus 157 g~~~~------~~-~~-~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~ 204 (248)
T d1snya_ 157 GSIQG------NT-DG-GMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK 204 (248)
T ss_dssp GCSTT------CC-SC-CCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred cccCC------CC-CC-ChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCccc
Confidence 21110 01 11 1248999999887765543 3 5678898874
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.61 E-value=2.1e-07 Score=77.60 Aligned_cols=168 Identities=13% Similarity=0.029 Sum_probs=99.1
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CC--ceeeccCc---c-----------ccCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MG--ITPSLKWT---E-----------ATQKF 143 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~--i~~~~~d~---~-----------~~~~~ 143 (272)
+..|++||||+ +-||+.++++|.++ |++|+...|+.++...+.. .+ +..+..|. + .+.++
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i 80 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRL 80 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 44578999997 99999999999999 9999999999877654432 23 33444553 1 24689
Q ss_pred CEEEEecCCCCCCC--------hHHHHHH-----------HHHHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSLD--------YPGDVRL-----------AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~~~-----------l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
|++||+|+...... |.+.+.. .+....+.+.++.+||.+.... | ...
T Consensus 81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~-------------~-~~~ 146 (241)
T d2a4ka1 81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-------------F-GLA 146 (241)
T ss_dssp CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-------------H-HHH
T ss_pred cEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc-------------c-Ccc
Confidence 99999997543221 2221111 0111223344555554332110 1 124
Q ss_pred hHHHHHHHHHHHHHHc----C-----eeEEeeCceecCCC---c-HHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 205 PRTDVLLKAEKVILEF----G-----GCVLRLAGLYKADR---G-AHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~~----~-----~~IlRp~~iyG~~~---~-~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
.|+.+|...|.+.+.. + +-.+.||.+--+-. . .....+.+..+.+ -+...+|+|++++..+
T Consensus 147 ~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~------r~~~p~dva~~v~fL~ 220 (241)
T d2a4ka1 147 HYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLG------RAGRPEEVAQAALFLL 220 (241)
T ss_dssp HHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTC------SCBCHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCC------CCcCHHHHHHHHHHHh
Confidence 7999999999877654 2 46788998843311 1 1111222222221 2557899999877543
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.60 E-value=7.8e-07 Score=74.42 Aligned_cols=166 Identities=14% Similarity=0.023 Sum_probs=95.0
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCC-eEEEEecCCcc---hh----hhhhCC--ceeeccCc---c-------c---c
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADH---HD----ELINMG--ITPSLKWT---E-------A---T 140 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~-~V~~~~R~~~~---~~----~l~~~~--i~~~~~d~---~-------~---~ 140 (272)
.++||||+ |-||..++++|.++ |+ +|+.+.|+..+ .. ++...+ +..+.+|. + . .
T Consensus 10 gt~lVTGgs~GIG~a~a~~la~~--Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~ 87 (259)
T d2fr1a1 10 GTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 87 (259)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence 47999996 99999999999999 98 57777886322 22 223334 33344442 1 1 2
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
...|.|||+++...... +...+ ..+. ....+..++|++||....-... ..
T Consensus 88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~-------------~~ 154 (259)
T d2fr1a1 88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP-------------GL 154 (259)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT-------------TC
T ss_pred ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCc-------------cc
Confidence 25789999998754322 11111 1111 1233567899999987532111 11
Q ss_pred ChHHHHHHHHHHHHHHc---C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 204 SPRTDVLLKAEKVILEF---G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~---~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
..|+.+|...|.+.++. | ++.+.||.+.+++...- .+. ...-..| ...+..+++++++..++
T Consensus 155 ~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~--~~~-~~~~~~G---~~~~~~~~~~~~l~~~l 221 (259)
T d2fr1a1 155 GGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEG--PVA-DRFRRHG---VIEMPPETACRALQNAL 221 (259)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---------------CTTTT---EECBCHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCccccc--hHH-HHHHhcC---CCCCCHHHHHHHHHHHH
Confidence 57899998888766554 3 68899998876652110 000 1110111 23466788888776654
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.59 E-value=3.3e-07 Score=76.95 Aligned_cols=133 Identities=11% Similarity=-0.026 Sum_probs=86.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh--------CCceeeccCc---c-----------cc
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWT---E-----------AT 140 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~--------~~i~~~~~d~---~-----------~~ 140 (272)
.|++||||+ +-||+.++++|.++ |++|+.++|++++.++... ..+..+..|. + ..
T Consensus 3 GKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (254)
T d2gdza1 3 GKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 80 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 478999996 89999999999999 9999999998766543221 1233334442 1 24
Q ss_pred CCCCEEEEecCCCCCCChHHHHH-----------HHH--H--HhcC-CCeEEEEecceeecCCCCCCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLDYPGDVR-----------LAA--L--SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~~~~~~~-----------~l~--~--~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~ 204 (272)
..+|++||+|+.....++.+.+. ..+ + ...+ ..++|++||...+-.. |. ..
T Consensus 81 G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~------------~~-~~ 147 (254)
T d2gdza1 81 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV------------AQ-QP 147 (254)
T ss_dssp SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------------TT-CH
T ss_pred CCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC------------CC-cc
Confidence 58999999999876655433221 111 1 1122 3579999997643211 11 25
Q ss_pred hHHHHHHHHHHHHHH---------cC--eeEEeeCcee
Q 024143 205 PRTDVLLKAEKVILE---------FG--GCVLRLAGLY 231 (272)
Q Consensus 205 ~y~~sk~~aE~~l~~---------~~--~~IlRp~~iy 231 (272)
.|+.+|...+.+.+. .+ +..+.||.+-
T Consensus 148 ~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~ 185 (254)
T d2gdza1 148 VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVN 185 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBS
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCC
Confidence 799999988776542 12 4668898873
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.58 E-value=2.7e-07 Score=77.55 Aligned_cols=135 Identities=10% Similarity=0.001 Sum_probs=86.5
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh---CCceeeccCc--------------cccCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT--------------EATQKF 143 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~---~~i~~~~~d~--------------~~~~~~ 143 (272)
+..|++||||+ +-||+.++++|.++ |++|+..+|++++.+.+.. .....+..|. +.+..+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 81 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTL 81 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 44578999996 89999999999999 9999999998877655432 1233333442 124689
Q ss_pred CEEEEecCCCCCCC--------hHHHHH-----------HHHH-HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCC
Q 024143 144 PYVIFCAPPSRSLD--------YPGDVR-----------LAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (272)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~~-----------~l~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~ 203 (272)
|++||+|+...... |.+.+. .++. -...-.++|++||...+-.. | ..
T Consensus 82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~------------~-~~ 148 (253)
T d1hxha_ 82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPI------------E-QY 148 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCC------------T-TB
T ss_pred CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCc------------c-cc
Confidence 99999998643211 221111 1110 11234789999997643110 1 12
Q ss_pred ChHHHHHHHHHHHHHHc---------C--eeEEeeCcee
Q 024143 204 SPRTDVLLKAEKVILEF---------G--GCVLRLAGLY 231 (272)
Q Consensus 204 ~~y~~sk~~aE~~l~~~---------~--~~IlRp~~iy 231 (272)
..|+.+|...+.+.+.. + +-.+-||.+.
T Consensus 149 ~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~ 187 (253)
T d1hxha_ 149 AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIY 187 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEEC
T ss_pred ccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCc
Confidence 58999999888766532 2 3457888774
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.57 E-value=3.4e-07 Score=77.75 Aligned_cols=135 Identities=15% Similarity=0.081 Sum_probs=86.6
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCC-----ceeeccCc---c-----------
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWT---E----------- 138 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~-----i~~~~~d~---~----------- 138 (272)
..|+++|||+ +-||+.++++|.++ |++|++.+|++++++.+ ...+ +..+.+|. +
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 80 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence 4578999996 88999999999999 99999999987765443 2222 33444552 1
Q ss_pred ccCCCCEEEEecCCCCCC----------ChHHHHH-----------HHH--HHhcCCCeEEEEecceeecCCCCCCCCCC
Q 024143 139 ATQKFPYVIFCAPPSRSL----------DYPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDED 195 (272)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~----------~~~~~~~-----------~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (272)
.+..+|++||+|+..... +|.+.+. .++ +...+-.+++++||...+...
T Consensus 81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~-------- 152 (274)
T d1xhla_ 81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH-------- 152 (274)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC--------
T ss_pred HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccC--------
Confidence 245899999999853211 0211111 111 123455678888775532111
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceec
Q 024143 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (272)
Q Consensus 196 ~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG 232 (272)
| ....|+.+|...+.+.+.. + +..+.||.+--
T Consensus 153 ----~-~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T 193 (274)
T d1xhla_ 153 ----S-GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVAT 193 (274)
T ss_dssp ----T-TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCS
T ss_pred ----C-CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcC
Confidence 1 1257999999988877643 2 56789998854
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.55 E-value=2.8e-07 Score=79.48 Aligned_cols=138 Identities=15% Similarity=0.102 Sum_probs=86.8
Q ss_pred CCCcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc---------hhhh----hhCCc--eeeccCc-----
Q 024143 79 SGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH---------HDEL----INMGI--TPSLKWT----- 137 (272)
Q Consensus 79 ~~~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~---------~~~l----~~~~i--~~~~~d~----- 137 (272)
|..+..|++||||+ +-||+.++++|.++ |++|++.+|+.+. .+.+ ...+. .....|.
T Consensus 2 Pm~l~gKvalITGas~GIG~aiA~~la~~--Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 79 (302)
T d1gz6a_ 2 PLRFDGRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEK 79 (302)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHH
T ss_pred CcCcCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHH
Confidence 44566688999997 88999999999999 9999999876432 1111 11221 1222222
Q ss_pred ------cccCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCC
Q 024143 138 ------EATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNG 190 (272)
Q Consensus 138 ------~~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~ 190 (272)
+.+.++|++||+|+...... |.+.+ +.++ +.+.+-.++|++||...+-..
T Consensus 80 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~--- 156 (302)
T d1gz6a_ 80 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN--- 156 (302)
T ss_dssp HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---
T ss_pred HHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC---
Confidence 13458999999999654322 21111 1111 134466799999998753211
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCcee
Q 024143 191 ACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (272)
Q Consensus 191 ~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iy 231 (272)
| ....|+.+|...+.+.+.. + +..+-|+.+-
T Consensus 157 ---------~-~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~ 196 (302)
T d1gz6a_ 157 ---------F-GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGS 196 (302)
T ss_dssp ---------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCS
T ss_pred ---------C-CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCC
Confidence 1 1258999999988776543 2 4567887653
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.55 E-value=1.6e-06 Score=71.73 Aligned_cols=162 Identities=11% Similarity=0.047 Sum_probs=93.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-----------cc--cCCCCEEEEe
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----------EA--TQKFPYVIFC 149 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-----------~~--~~~~D~Vi~~ 149 (272)
.|+|||||+ |-||+.++++|.++ |++|..+++.+...... .........+. +. ..++|++||+
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~--G~~V~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInn 78 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEEASA-SVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCV 78 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTTSSE-EEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCccccccc-cceeecccCcHHHHHHHHHHHHHHhCCCCceEEEEC
Confidence 478999997 99999999999999 99999998865442110 00000000000 01 2358999999
Q ss_pred cCCCCC----CC-hHHHHHH-----H---H-------HHhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHHHH
Q 024143 150 APPSRS----LD-YPGDVRL-----A---A-------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (272)
Q Consensus 150 a~~~~~----~~-~~~~~~~-----l---~-------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~~s 209 (272)
|+.... .+ ..+..+. + + ....+-.++|++||...+... |. ...|+.+
T Consensus 79 AG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~------------~~-~~~Y~as 145 (236)
T d1dhra_ 79 AGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT------------PG-MIGYGMA 145 (236)
T ss_dssp CCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------TT-BHHHHHH
T ss_pred CcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc------------cC-CcccHHH
Confidence 984221 11 1111111 1 0 011223689999997643211 11 2589999
Q ss_pred HHHHHHHHHHc---------C--eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHHHh
Q 024143 210 LLKAEKVILEF---------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFIAS 271 (272)
Q Consensus 210 k~~aE~~l~~~---------~--~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~a~ 271 (272)
|...+.+.+.. + +..+.|+.+.- ++...... ....-.++..+|+|+.+...+
T Consensus 146 Kaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T----~~~~~~~~------~~~~~~~~~pe~va~~~~~l~ 208 (236)
T d1dhra_ 146 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDT----PMNRKSMP------EADFSSWTPLEFLVETFHDWI 208 (236)
T ss_dssp HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEEC----HHHHHHST------TSCGGGSEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcC----CcchhhCc------cchhhcCCCHHHHHHHHHHHh
Confidence 99999887753 2 46688888753 22211111 111223566788888877554
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.53 E-value=3.9e-07 Score=77.07 Aligned_cols=135 Identities=12% Similarity=0.094 Sum_probs=85.0
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CC--ceeeccCc--------------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MG--ITPSLKWT--------------EA 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~--i~~~~~d~--------------~~ 139 (272)
+..|++||||+ +-||++++++|.++ |++|+++.|++++++++.. .+ ...+..|. +.
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~--G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 89 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 44588999997 88999999999999 9999999999877655432 12 22222331 12
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHHH-----------HHHH-HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA-LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~-~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
....|+++++++...... +.+.+ +.++ .-..+-.++|++||...+-..
T Consensus 90 ~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~------------ 157 (269)
T d1xu9a_ 90 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY------------ 157 (269)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC------------
T ss_pred hCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCC------------
Confidence 457899999998643211 11111 1111 011234789999997643211
Q ss_pred CCCCChHHHHHHHHHHHHHHc---------C--eeEEeeCcee
Q 024143 200 PIGRSPRTDVLLKAEKVILEF---------G--GCVLRLAGLY 231 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~---------~--~~IlRp~~iy 231 (272)
|. ...|+.+|...+.+.+.. + +..+.||.+-
T Consensus 158 p~-~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~ 199 (269)
T d1xu9a_ 158 PM-VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLID 199 (269)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBC
T ss_pred CC-chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCC
Confidence 11 258999999888665432 2 3468888773
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.52 E-value=3.9e-07 Score=76.34 Aligned_cols=167 Identities=13% Similarity=0.034 Sum_probs=95.1
Q ss_pred CCCeEEEEcC-c--HHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh---h-C-CceeeccCc---c-----------cc
Q 024143 83 GENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---N-M-GITPSLKWT---E-----------AT 140 (272)
Q Consensus 83 ~~~~IlItGa-G--fiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~---~-~-~i~~~~~d~---~-----------~~ 140 (272)
..|++||||+ | =||+.++++|.++ |++|+...|+++..+... . . ....+..|. + ..
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~--Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence 3478999996 6 4999999999999 999999888765433221 1 1 233333442 1 24
Q ss_pred CCCCEEEEecCCCCC----C---C-----hHHHHH-HH---H---HHh----cCCCeEEEEecceeecCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRS----L---D-----YPGDVR-LA---A---LSW----NGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~----~---~-----~~~~~~-~l---~---~~~----~gvkr~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
.++|++||+|+.... . + +...+. ++ + ... ..-.++|++||.......
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~---------- 154 (256)
T d1ulua_ 85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV---------- 154 (256)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC----------
T ss_pred CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC----------
Confidence 579999999985321 0 1 111111 10 0 111 112579999987643211
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc------HHHHHHHcCcccCCCCcccccccHHH
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG------AHVYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~------~~~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
| ....|+.+|...+.+.+.. + +-.+.|+.+.-+... .....+.+..|.++ +...+|
T Consensus 155 --~-~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R------~~~ped 225 (256)
T d1ulua_ 155 --P-KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRR------NITQEE 225 (256)
T ss_dssp --T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSS------CCCHHH
T ss_pred --C-CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCC------CcCHHH
Confidence 1 1258999999999877653 2 457889988654321 11112222222221 456789
Q ss_pred HHHHHHHH
Q 024143 263 NTLVLFIA 270 (272)
Q Consensus 263 va~ai~~a 270 (272)
+|.+++..
T Consensus 226 vA~~v~fL 233 (256)
T d1ulua_ 226 VGNLGLFL 233 (256)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887654
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.52 E-value=3.3e-07 Score=75.90 Aligned_cols=156 Identities=11% Similarity=0.051 Sum_probs=92.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc--------------c--ccCCCCEEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------------E--ATQKFPYVI 147 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~--------------~--~~~~~D~Vi 147 (272)
.||||||+ |-||+.++++|.++ |++|++++|++..... . .....++. . .....|++|
T Consensus 3 gkVlITGas~GIG~aia~~l~~~--G~~V~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~li 76 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQAD---S-NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF 76 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTTSS---E-EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCchhccc---c-cceeccccCchhHHHHHHHHHHHHhcCCCeeEEE
Confidence 48999997 99999999999999 9999999998654321 0 00111110 0 124689999
Q ss_pred EecCCCCC-----CChHHHHHH-----HH---------H-HhcCCCeEEEEecceeecCCCCCCCCCCCCCCCCCCChHH
Q 024143 148 FCAPPSRS-----LDYPGDVRL-----AA---------L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (272)
Q Consensus 148 ~~a~~~~~-----~~~~~~~~~-----l~---------~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p~~~~~y~ 207 (272)
|+|+.... .+..+..+. +. . ...+-.++|++||...+... | ....|+
T Consensus 77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~------------~-~~~~Y~ 143 (235)
T d1ooea_ 77 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT------------P-SMIGYG 143 (235)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------T-TBHHHH
T ss_pred ECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc------------c-cccchH
Confidence 99985321 111111111 10 0 11123689999997643211 1 125899
Q ss_pred HHHHHHHHHHHHc-------C----eeEEeeCceecCCCcHHHHHHHcCcccCCCCcccccccHHHHHHHHHH
Q 024143 208 DVLLKAEKVILEF-------G----GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEVNTLVLFI 269 (272)
Q Consensus 208 ~sk~~aE~~l~~~-------~----~~IlRp~~iyG~~~~~~~~~l~~g~~~~~~~~~~~~I~v~Dva~ai~~ 269 (272)
.+|...+.+.+.+ + ...+.|+.+- .++...... ......++..+|+++.++.
T Consensus 144 asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~----T~~~~~~~~------~~~~~~~~~~~~va~~~~~ 206 (235)
T d1ooea_ 144 MAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLD----TPMNRKWMP------NADHSSWTPLSFISEHLLK 206 (235)
T ss_dssp HHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBC----CHHHHHHST------TCCGGGCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCc----CcchhhhCc------CCccccCCCHHHHHHHHHH
Confidence 9999999887653 1 3446888763 232211111 1123346778888887653
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.51 E-value=4.9e-07 Score=76.62 Aligned_cols=70 Identities=17% Similarity=0.252 Sum_probs=52.7
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----hCC-----ceeeccCc---c----------
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWT---E---------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~~~-----i~~~~~d~---~---------- 138 (272)
+..|++||||+ +-||+.++++|.++ |++|+..+|++++++++. +.+ +..+.+|. +
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 80 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL 80 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence 45588999996 99999999999999 999999999987655432 222 33444542 1
Q ss_pred -ccCCCCEEEEecCCC
Q 024143 139 -ATQKFPYVIFCAPPS 153 (272)
Q Consensus 139 -~~~~~D~Vi~~a~~~ 153 (272)
...++|++||+|+..
T Consensus 81 ~~~g~iDilvnnAG~~ 96 (272)
T d1xkqa_ 81 KQFGKIDVLVNNAGAA 96 (272)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHhCCceEEEeCCccc
Confidence 245899999999864
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.50 E-value=1.5e-07 Score=73.74 Aligned_cols=66 Identities=17% Similarity=0.306 Sum_probs=53.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCce-eeccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT-PSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~-~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|||.|+|+|.+|+.+++.|.+. ||+|++.+|+++..+.....++. ....+.++++++|+||.+.++
T Consensus 1 MkI~iIG~G~mG~~lA~~l~~~--g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilavp~ 67 (165)
T d2f1ka2 1 MKIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPI 67 (165)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccCcH
Confidence 6899999999999999999999 99999999998777665555542 333344678999999988764
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=98.50 E-value=1.3e-06 Score=72.88 Aligned_cols=168 Identities=11% Similarity=-0.007 Sum_probs=97.3
Q ss_pred CCCeEEEEcC-c--HHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh----CC-ceeeccCc--------------ccc
Q 024143 83 GENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG-ITPSLKWT--------------EAT 140 (272)
Q Consensus 83 ~~~~IlItGa-G--fiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~----~~-i~~~~~d~--------------~~~ 140 (272)
..|++||||+ | -||+.+++.|.++ |++|+...|+++..+.+.+ .+ ......|. +..
T Consensus 4 ~gK~~lITGass~~GIG~aiA~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (258)
T d1qsga_ 4 SGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 81 (258)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCchhHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence 4578999996 6 5899999999999 9999999998654433221 11 12222221 134
Q ss_pred CCCCEEEEecCCCCCCC---------hHHHHHHH-----------HH----HhcCCCeEEEEecceeecCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD---------YPGDVRLA-----------AL----SWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~---------~~~~~~~l-----------~~----~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (272)
...|++||+++...... ..+..... .. ...+-+.+|++||......
T Consensus 82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~---------- 151 (258)
T d1qsga_ 82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA---------- 151 (258)
T ss_dssp SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----------
T ss_pred cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC----------
Confidence 57799999997643211 01111110 00 0122346888888663111
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcH------HHHHHHcCcccCCCCcccccccHH
Q 024143 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYE 261 (272)
Q Consensus 197 p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~------~~~~l~~g~~~~~~~~~~~~I~v~ 261 (272)
.|. ...|+.+|...+.+.+.. + +-.++||.+.-+.... ....+.+..+.+ -+...+
T Consensus 152 --~~~-~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~pe 222 (258)
T d1qsga_ 152 --IPN-YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR------RTVTIE 222 (258)
T ss_dssp --CTT-TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS------SCCCHH
T ss_pred --CCC-cHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCC------CCcCHH
Confidence 111 258999999999887764 2 5678999997553211 111122212221 145678
Q ss_pred HHHHHHHHHh
Q 024143 262 VNTLVLFIAS 271 (272)
Q Consensus 262 Dva~ai~~a~ 271 (272)
|+|.++...+
T Consensus 223 eia~~v~fL~ 232 (258)
T d1qsga_ 223 DVGNSAAFLC 232 (258)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9998876543
|
| >d2gdwa1 a.28.1.2 (A:8-83) Peptidyl carrier protein (PCP), thioester domain {Bacillus brevis [TaxId: 1393]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Peptidyl carrier domain domain: Peptidyl carrier protein (PCP), thioester domain species: Bacillus brevis [TaxId: 1393]
Probab=98.42 E-value=3.9e-09 Score=72.65 Aligned_cols=58 Identities=22% Similarity=0.164 Sum_probs=47.7
Q ss_pred cceeeecccCccccc-ccccccCCcchhhhcc-ccccccc--cccccceecccccccccccc
Q 024143 2 GTISCTNTVSLNGAC-TRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNF 59 (272)
Q Consensus 2 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 59 (272)
..||+.+++.-.-.. ++||++||||+++-|+ -+++++| ++++..+|..++...++..+
T Consensus 13 ~~i~~~vL~~~~i~~~~~f~~lG~dSl~a~~l~~~i~~~~~~~l~~~~l~~~pTi~~LA~~i 74 (76)
T d2gdwa1 13 AEIWERVLGVSGIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYV 74 (76)
T ss_dssp HHHHHHHTTSSCCCTTTTSSTTTCTTHHHHHHHHHHHHTTSSCCTTHHHHHSCSHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCHHHcCCChHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHh
Confidence 578999987522122 9999999999999999 9999998 88899999999888876543
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.40 E-value=6.5e-06 Score=68.18 Aligned_cols=169 Identities=12% Similarity=0.007 Sum_probs=97.9
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---CceeeccCc--------------cccCCC
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT--------------EATQKF 143 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~i~~~~~d~--------------~~~~~~ 143 (272)
+..|.+||||+ +-||+.++++|.++ |++|++++|+.++.+.+... .......+. ......
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV 80 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccc
Confidence 45678999996 88999999999999 99999999998876654321 122222221 123567
Q ss_pred CEEEEecCCCCC------CC--------hHHHHH-----------HHHH--H------hcCCCeEEEEecceeecCCCCC
Q 024143 144 PYVIFCAPPSRS------LD--------YPGDVR-----------LAAL--S------WNGEGSFLFTSSSAIYDCSDNG 190 (272)
Q Consensus 144 D~Vi~~a~~~~~------~~--------~~~~~~-----------~l~~--~------~~gvkr~V~~SS~~vYg~~~~~ 190 (272)
|.+++++..... .+ +.+.+. .+.. . ..+..++|++||...+-..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~--- 157 (248)
T d2o23a1 81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ--- 157 (248)
T ss_dssp CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC---
T ss_pred cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC---
Confidence 888887653221 00 111111 1110 0 1123479999998754321
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCcHHH----HHHHcCcccCCCCccccc
Q 024143 191 ACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV----YWLQKGTVDSRPDHILNL 257 (272)
Q Consensus 191 ~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~~~~----~~l~~g~~~~~~~~~~~~ 257 (272)
| ....|+.+|...+.+.+.. + +..+.||.+.-+....+. ..+.+..+. . .-+
T Consensus 158 ---------~-~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl-~----~R~ 222 (248)
T d2o23a1 158 ---------V-GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPF-P----SRL 222 (248)
T ss_dssp ---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSS-S----CSC
T ss_pred ---------C-CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCC-C----CCC
Confidence 1 1258999999999887754 2 467889988644321111 011111111 0 114
Q ss_pred ccHHHHHHHHHHH
Q 024143 258 IHYEVNTLVLFIA 270 (272)
Q Consensus 258 I~v~Dva~ai~~a 270 (272)
...+|+|++++..
T Consensus 223 g~peevA~~v~fL 235 (248)
T d2o23a1 223 GDPAEYAHLVQAI 235 (248)
T ss_dssp BCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHH
Confidence 5778999887643
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.39 E-value=1.7e-06 Score=72.55 Aligned_cols=135 Identities=16% Similarity=0.140 Sum_probs=81.2
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-hh----hhhhCC--ceeeccCc---c-----------c
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HD----ELINMG--ITPSLKWT---E-----------A 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~----~l~~~~--i~~~~~d~---~-----------~ 139 (272)
+.-|++||||+ +-||++++++|.++ |++|+...|+.++ .+ .+...+ +..+.+|. + .
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~--G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 81 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence 44578999996 99999999999999 9999987665332 22 233333 33444443 1 2
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHHHH-----------HHHHHhcCCCeEEEEecce-eecCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGDVR-----------LAALSWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVV 199 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~~-----------~l~~~~~gvkr~V~~SS~~-vYg~~~~~~~~E~~p~~ 199 (272)
....|++||+|+...... |.+.+. .++.....-++.+.++|.. .+.. .
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~------------~ 149 (259)
T d1ja9a_ 82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG------------I 149 (259)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS------------C
T ss_pred cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccC------------C
Confidence 457999999999654322 111111 1110111224566665543 2211 0
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCcee
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iy 231 (272)
|. ...|+.+|...+.+.+.. + +-.+.||++-
T Consensus 150 ~~-~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~ 189 (259)
T d1ja9a_ 150 PN-HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVK 189 (259)
T ss_dssp CS-CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred CC-chhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCcc
Confidence 11 257999999998877654 2 5678999874
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.31 E-value=3.6e-06 Score=70.08 Aligned_cols=68 Identities=12% Similarity=0.116 Sum_probs=51.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCC--eEEEEecCCcchhhhhhC---CceeeccCc---c-----------cc--C
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINM---GITPSLKWT---E-----------AT--Q 141 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~l~~~---~i~~~~~d~---~-----------~~--~ 141 (272)
+++|||||+ +-||..++++|.++ |+ .|++..|++++.+++.+. .+..+..|. + .+ .
T Consensus 3 ~KtilITGassGIG~a~a~~la~~--G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 80 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKD--KNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTC--TTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence 368999997 99999999999999 85 788889998887766542 345555553 1 11 2
Q ss_pred CCCEEEEecCCC
Q 024143 142 KFPYVIFCAPPS 153 (272)
Q Consensus 142 ~~D~Vi~~a~~~ 153 (272)
..|++||+|+..
T Consensus 81 ~idilinnAG~~ 92 (250)
T d1yo6a1 81 GLSLLINNAGVL 92 (250)
T ss_dssp CCCEEEECCCCC
T ss_pred CeEEEEEcCccc
Confidence 489999999853
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.30 E-value=4.7e-06 Score=70.21 Aligned_cols=136 Identities=13% Similarity=0.076 Sum_probs=84.2
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc-hh----hhhhCC--ceeeccCc--------------cc
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HD----ELINMG--ITPSLKWT--------------EA 139 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~----~l~~~~--i~~~~~d~--------------~~ 139 (272)
+.-|++||||+ +-||+.++++|.++ |++|++++|+.++ .+ .+...+ +..+..|. +.
T Consensus 16 L~gK~~lITGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 93 (272)
T d1g0oa_ 16 LEGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 93 (272)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence 55589999996 99999999999999 9999999887432 22 223333 33333442 13
Q ss_pred cCCCCEEEEecCCCCCCC--------hHHHHH-----------HHHHHhcCCCeEEEEecceeecCCCCCCCCCCCCCCC
Q 024143 140 TQKFPYVIFCAPPSRSLD--------YPGDVR-----------LAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (272)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~~-----------~l~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~p 200 (272)
..+.|++||+++...... +.+.+. .++.....-++.++++|... ... +. +
T Consensus 94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~--~~~--------~~-~ 162 (272)
T d1g0oa_ 94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG--QAK--------AV-P 162 (272)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG--TCS--------SC-S
T ss_pred hCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccc--ccc--------cc-c
Confidence 458999999998654321 111111 01111123457788876542 110 00 1
Q ss_pred CCCChHHHHHHHHHHHHHHc-------C--eeEEeeCcee
Q 024143 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (272)
Q Consensus 201 ~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iy 231 (272)
....|+.+|...+.+.+.. + +-.+.||.+-
T Consensus 163 -~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~ 201 (272)
T d1g0oa_ 163 -KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIK 201 (272)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred -chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcC
Confidence 1257999999998887643 2 5678999874
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.30 E-value=1.5e-06 Score=65.29 Aligned_cols=86 Identities=12% Similarity=0.039 Sum_probs=61.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc---c-----ccCCCCEEEEecCCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-----ATQKFPYVIFCAPPSRS 155 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~---~-----~~~~~D~Vi~~a~~~~~ 155 (272)
|+|+|+|+|.+|+.+++.|.+. |++|+++++++++...+.. .+...+.+|. + -++++|.++-+....
T Consensus 1 M~IvI~G~G~~G~~la~~L~~~--g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d-- 76 (132)
T d1lssa_ 1 MYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE-- 76 (132)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH--
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcH--
Confidence 6899999999999999999999 9999999999988877654 3677777664 1 256889887754321
Q ss_pred CChHHHH-HHHHHHhcCCCeEEE
Q 024143 156 LDYPGDV-RLAALSWNGEGSFLF 177 (272)
Q Consensus 156 ~~~~~~~-~~l~~~~~gvkr~V~ 177 (272)
..++ ..+..+..+++++|-
T Consensus 77 ---~~N~~~~~~~k~~~~~~iI~ 96 (132)
T d1lssa_ 77 ---EVNLMSSLLAKSYGINKTIA 96 (132)
T ss_dssp ---HHHHHHHHHHHHTTCCCEEE
T ss_pred ---HHHHHHHHHHHHcCCceEEE
Confidence 1122 222234556777664
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.29 E-value=6.5e-06 Score=69.07 Aligned_cols=168 Identities=8% Similarity=-0.063 Sum_probs=93.9
Q ss_pred CCCeEEEEcC-c--HHHHHHHHHHHhcCCCCeEEEEecCCcchhh---hhhCC--ceeeccCc--------------ccc
Q 024143 83 GENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDE---LINMG--ITPSLKWT--------------EAT 140 (272)
Q Consensus 83 ~~~~IlItGa-G--fiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~---l~~~~--i~~~~~d~--------------~~~ 140 (272)
.-|++||||+ | -||..++++|.++ |++|+.+.|+++..+. +.+.+ ......|. +.+
T Consensus 4 ~gK~alITGaag~~GIG~AiA~~la~~--Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (274)
T d2pd4a1 4 KGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 81 (274)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence 3478999996 7 5999999999999 9999999998643322 22222 22222221 135
Q ss_pred CCCCEEEEecCCCCC----CC----hHHHHHH-----------HH---HHhcCCCe-EEEEecceeecCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRS----LD----YPGDVRL-----------AA---LSWNGEGS-FLFTSSSAIYDCSDNGACDEDSP 197 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~----~~----~~~~~~~-----------l~---~~~~gvkr-~V~~SS~~vYg~~~~~~~~E~~p 197 (272)
..+|++||+++.... .+ ....... .. ....+... ++.+|+.+.....
T Consensus 82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~---------- 151 (274)
T d2pd4a1 82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM---------- 151 (274)
T ss_dssp SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----------
T ss_pred CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc----------
Confidence 689999999986432 11 1111100 00 01122223 4445544432211
Q ss_pred CCCCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCceecCCCc------HHHHHHHcCcccCCCCcccccccHHH
Q 024143 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG------AHVYWLQKGTVDSRPDHILNLIHYEV 262 (272)
Q Consensus 198 ~~p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iyG~~~~------~~~~~l~~g~~~~~~~~~~~~I~v~D 262 (272)
.. ...|+.+|...+.+.+.. + +-.+.|+.+.-+... ..........+. .-+...+|
T Consensus 152 -~~--~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~ped 222 (274)
T d2pd4a1 152 -AH--YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL------RKNVSLEE 222 (274)
T ss_dssp -TT--CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT------SSCCCHHH
T ss_pred -cc--chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc------cCCcCHHH
Confidence 11 157999999998887653 2 567889987654321 111111111111 22567889
Q ss_pred HHHHHHHHh
Q 024143 263 NTLVLFIAS 271 (272)
Q Consensus 263 va~ai~~a~ 271 (272)
+|.+++..+
T Consensus 223 IA~~v~fL~ 231 (274)
T d2pd4a1 223 VGNAGMYLL 231 (274)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 988876543
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.23 E-value=1e-06 Score=70.69 Aligned_cols=71 Identities=14% Similarity=0.137 Sum_probs=53.6
Q ss_pred CcCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-----CCcee---eccCc----cccCCCCEEE
Q 024143 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITP---SLKWT----EATQKFPYVI 147 (272)
Q Consensus 81 ~~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-----~~i~~---~~~d~----~~~~~~D~Vi 147 (272)
.+..|+|+|||+ |.||+.+++.|.++ |.+|+.+.|++++.+.+.. ..+.. ...|. +.+.++|+||
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDili 97 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGE--GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF 97 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhh--ccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeee
Confidence 356689999996 99999999999999 9999999999877654432 12222 22332 2578999999
Q ss_pred EecCCC
Q 024143 148 FCAPPS 153 (272)
Q Consensus 148 ~~a~~~ 153 (272)
|+++..
T Consensus 98 n~Ag~g 103 (191)
T d1luaa1 98 TAGAIG 103 (191)
T ss_dssp ECCCTT
T ss_pred ecCccc
Confidence 999864
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.23 E-value=7.9e-06 Score=69.44 Aligned_cols=131 Identities=12% Similarity=0.064 Sum_probs=79.6
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEE---ecCCcchhhhhh-------C--CceeeccCc---c--------c-c
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ---TMTADHHDELIN-------M--GITPSLKWT---E--------A-T 140 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~---~R~~~~~~~l~~-------~--~i~~~~~d~---~--------~-~ 140 (272)
-|||||+ +-||+.+++.|.++ |.+|+.+ .|+.+....+.+ . .+..+..|. + . .
T Consensus 4 VvlITGassGIG~a~A~~la~~--Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASD--PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTC--TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred EEEEccCCCHHHHHHHHHHHHC--CCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 3577896 99999999999999 8875544 444433332211 1 233444442 1 1 2
Q ss_pred CCCCEEEEecCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEecceeecCCCCCCCCCCCCCC
Q 024143 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (272)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~p~~ 199 (272)
..+|+++++++...... +.+.+ +.++ +.+.+-.++|++||....-. .
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~------------~ 149 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG------------L 149 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC------------C
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCC------------C
Confidence 46899999998654321 11111 1111 23456789999999764211 1
Q ss_pred CCCCChHHHHHHHHHHHHHHc-------C--eeEEeeCcee
Q 024143 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (272)
Q Consensus 200 p~~~~~y~~sk~~aE~~l~~~-------~--~~IlRp~~iy 231 (272)
|. ...|+.+|...+.+.+.. + +..+.||.+-
T Consensus 150 ~~-~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~ 189 (285)
T d1jtva_ 150 PF-NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVH 189 (285)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred CC-chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCC
Confidence 11 258999999888766543 3 6778999874
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=98.17 E-value=3.2e-06 Score=66.03 Aligned_cols=70 Identities=21% Similarity=0.379 Sum_probs=51.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCce-eeccCc--cccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT-PSLKWT--EATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~-~~~~d~--~~~~~~D~Vi~~a~~~ 153 (272)
|++|+|+|+|.+|..+++.|.+.+...+|++.+|+++..+.....+.. ....+. .....+|.||.|.++.
T Consensus 1 Mk~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p~~ 73 (171)
T d2g5ca2 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR 73 (171)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccCCch
Confidence 788999999999999999999992224899999998777666555542 222222 2345789999988863
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.16 E-value=1.1e-06 Score=68.54 Aligned_cols=68 Identities=21% Similarity=0.258 Sum_probs=56.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|+||.|+|.|.+|+.+++.|.++ ||+|.+.+|++++.+.+...+........+....+|+|+-|....
T Consensus 1 M~kIg~IGlG~MG~~iA~~L~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~ 68 (162)
T d3cuma2 1 MKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPAS 68 (162)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCH
T ss_pred CCEEEEEEEHHHHHHHHHHHHHC--CCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccch
Confidence 78999999999999999999999 999999999988887776666554332235788999999998753
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=98.13 E-value=7.8e-07 Score=69.37 Aligned_cols=66 Identities=12% Similarity=0.249 Sum_probs=55.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|||-|+|.|.+|+.+++.|++. ||+|++.+|++++.+.+...+........+..+++|+||-|.+.
T Consensus 1 MkIgiIGlG~MG~~~A~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~ 66 (161)
T d1vpda2 1 MKVGFIGLGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPN 66 (161)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSS
T ss_pred CEEEEEehhHHHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCC
Confidence 5899999999999999999999 99999999999988888776665433222567899999999875
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.12 E-value=5.3e-06 Score=62.17 Aligned_cols=66 Identities=12% Similarity=0.333 Sum_probs=55.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----ccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----~~~~~D~Vi~~a~~ 152 (272)
|+++|+|+|.+|+.+++.|.++ |++|++++.++++.+.+...+...+.+|. + -+.++|.||-+.+.
T Consensus 1 k~~iIiG~G~~G~~la~~L~~~--g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~ 74 (134)
T d2hmva1 1 KQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGA 74 (134)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCc
Confidence 5789999999999999999999 99999999999998888777777777763 1 25688988777664
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=98.08 E-value=2.5e-06 Score=65.69 Aligned_cols=65 Identities=20% Similarity=0.291 Sum_probs=53.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhhC-CceeeccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINM-GITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~~-~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|||.++|+|.+|+++++.|++. | ++|++.+|++++.+.+.+. ++.... +.+.+.++|+||.+..|
T Consensus 1 MkI~fIG~G~MG~ai~~~l~~~--~~~~i~v~~r~~~~~~~l~~~~~~~~~~-~~~~v~~~Div~lavkP 67 (152)
T d1yqga2 1 MNVYFLGGGNMAAAVAGGLVKQ--GGYRIYIANRGAEKRERLEKELGVETSA-TLPELHSDDVLILAVKP 67 (152)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CSCEEEEECSSHHHHHHHHHHTCCEEES-SCCCCCTTSEEEECSCH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC--CCCcEEEEeCChhHHHHhhhhccccccc-ccccccccceEEEecCH
Confidence 6899999999999999999988 6 9999999999888777653 555443 33567789999988865
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.04 E-value=1.2e-05 Score=67.06 Aligned_cols=135 Identities=10% Similarity=-0.069 Sum_probs=82.3
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHh---cCCCCeEEEEecCCcchhhhhh------CC--ceeeccCc---c----c----
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQ---EHPGCQIYGQTMTADHHDELIN------MG--ITPSLKWT---E----A---- 139 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~---~~~g~~V~~~~R~~~~~~~l~~------~~--i~~~~~d~---~----~---- 139 (272)
..|.++|||+ +-||+.++++|.+ + |++|+.+.|++++++.+.+ .+ +..+.+|. + .
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~ 82 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSP--GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCT--TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccC--CCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 3456788897 8999999999975 6 9999999999877655432 12 33344442 1 0
Q ss_pred -------cCCCCEEEEecCCCCC---C---C-----hHHHHH-H----------HHH--HhcC--CCeEEEEecceeecC
Q 024143 140 -------TQKFPYVIFCAPPSRS---L---D-----YPGDVR-L----------AAL--SWNG--EGSFLFTSSSAIYDC 186 (272)
Q Consensus 140 -------~~~~D~Vi~~a~~~~~---~---~-----~~~~~~-~----------l~~--~~~g--vkr~V~~SS~~vYg~ 186 (272)
....|++|++|+.... . + |.+.+. + ++. .+.+ ..++|++||...+..
T Consensus 83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~ 162 (259)
T d1oaaa_ 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP 162 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence 1245788999875321 1 1 211111 1 110 1122 358999999764321
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHc-----C--eeEEeeCceec
Q 024143 187 SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-----G--GCVLRLAGLYK 232 (272)
Q Consensus 187 ~~~~~~~E~~p~~p~~~~~y~~sk~~aE~~l~~~-----~--~~IlRp~~iyG 232 (272)
. | ....|+.+|...+.+.+.+ + +..+.||.+-.
T Consensus 163 ~------------~-~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T 202 (259)
T d1oaaa_ 163 Y------------K-GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDN 202 (259)
T ss_dssp C------------T-TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSS
T ss_pred C------------c-cchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCC
Confidence 1 1 1258999999988776654 2 56678887753
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.02 E-value=2.4e-05 Score=59.81 Aligned_cols=71 Identities=14% Similarity=0.091 Sum_probs=50.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhh-----CCceeeccCccccCCCCEEEEecCCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN-----MGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~-----~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
.+||.|+|+|++|+.++..|..+.-..+|+.+++++++... +.. ........|.+.+.++|+||.+++...
T Consensus 5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~~~adivvitag~~~ 84 (146)
T d1ez4a1 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ 84 (146)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHHhccccEEEEeccccc
Confidence 46999999999999999999998212599999998755332 111 112233456678899999999998643
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.02 E-value=0.00015 Score=59.86 Aligned_cols=35 Identities=17% Similarity=0.272 Sum_probs=31.3
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~ 121 (272)
+..||||+ +-||+.++++|.++ |++|+.++|+.++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~--G~~Vvi~~r~~~~ 37 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEG 37 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchH
Confidence 46799997 88999999999999 9999999998654
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=98.00 E-value=1.5e-06 Score=67.27 Aligned_cols=67 Identities=10% Similarity=0.086 Sum_probs=49.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCcee-------eccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-------SLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~-------~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|||+|+|+|.+|+.++..|.+. ||+|+.++|++.+...+...+.+. ...+.+....+|+||.+....
T Consensus 1 MkI~IiGaG~iG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vka~ 74 (167)
T d1ks9a2 1 MKITVLGCGALGQLWLTALCKQ--GHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW 74 (167)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeeccc
Confidence 6999999999999999999999 999999999877654332211110 011223567899999998864
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.95 E-value=1.2e-05 Score=64.69 Aligned_cols=67 Identities=15% Similarity=0.148 Sum_probs=50.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec-------------------cCc-cccCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-------------------KWT-EATQKFP 144 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~-------------------~d~-~~~~~~D 144 (272)
|||.|+|+||+|..++..|.+. ||+|++++.++++.+.+.+....... .|. ++.+++|
T Consensus 1 MkI~ViGlG~vGl~~a~~la~~--g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d 78 (202)
T d1mv8a2 1 MRISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (202)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred CEEEEECCCHhHHHHHHHHHhC--CCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCC
Confidence 6899999999999999999999 99999999988877766532211111 111 2467899
Q ss_pred EEEEecCCC
Q 024143 145 YVIFCAPPS 153 (272)
Q Consensus 145 ~Vi~~a~~~ 153 (272)
+++.|.+..
T Consensus 79 ~i~i~VpTP 87 (202)
T d1mv8a2 79 VSFICVGTP 87 (202)
T ss_dssp EEEECCCCC
T ss_pred EEEEecCcc
Confidence 999999853
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.95 E-value=2.5e-06 Score=65.83 Aligned_cols=66 Identities=12% Similarity=0.252 Sum_probs=53.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|||.|+|+|.+|+.+++.|.+. |++|++..|++++...+.. .++.......+..+++|+||.|..|
T Consensus 1 MkIg~IG~G~mG~al~~~l~~~--~~~i~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~~dvIilavkp 67 (152)
T d2ahra2 1 MKIGIIGVGKMASAIIKGLKQT--PHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKP 67 (152)
T ss_dssp CEEEEECCSHHHHHHHHHHTTS--SCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSCG
T ss_pred CEEEEEeccHHHHHHHHHHHhC--CCeEEEEcChHHhHHhhccccceeeechhhhhhhccceeeeecch
Confidence 5899999999999999999999 9999999999887776643 3555443223567899999999865
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.94 E-value=5.3e-06 Score=64.54 Aligned_cols=66 Identities=17% Similarity=0.201 Sum_probs=49.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-Cceeecc-C--c-----cccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLK-W--T-----EATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i~~~~~-d--~-----~~~~~~D~Vi~~a~~ 152 (272)
++|+|+|+|.+|+++++.|.++ ||+|++.+|+.++...+... +...... + . +.+...|.++.+.+.
T Consensus 3 K~IliiGaG~~G~~~a~~L~~~--g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~ 77 (182)
T d1e5qa1 3 KSVLMLGSGFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPY 77 (182)
T ss_dssp CEEEEECCSTTHHHHHHHHHTT--TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccc
Confidence 7899999999999999999999 99999999999888776543 2111111 1 1 246678888866643
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.93 E-value=2.4e-05 Score=60.68 Aligned_cols=96 Identities=19% Similarity=0.227 Sum_probs=64.4
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhh-CCceeeccCc--cccCCCCEEEEecCCCCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN-MGITPSLKWT--EATQKFPYVIFCAPPSRSLD 157 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~-~~i~~~~~d~--~~~~~~D~Vi~~a~~~~~~~ 157 (272)
...++|+|+|+|-+|+.+++.|.+. |. +|++..|+.++...+.. .+.....++. +.+.++|+||.|.+...+--
T Consensus 22 l~~~~ilviGaG~~g~~v~~~L~~~--g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~Divi~atss~~~ii 99 (159)
T d1gpja2 22 LHDKTVLVVGAGEMGKTVAKSLVDR--GVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVI 99 (159)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCB
T ss_pred cccCeEEEECCCHHHHHHHHHHHhc--CCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccCCEEEEecCCCCccc
Confidence 4568999999999999999999999 87 69999998777765543 3444443332 46779999999987544321
Q ss_pred hHHHHHHHHHHhcCCCeEEEEe
Q 024143 158 YPGDVRLAALSWNGEGSFLFTS 179 (272)
Q Consensus 158 ~~~~~~~l~~~~~gvkr~V~~S 179 (272)
-.+.++..+.....-+.++++-
T Consensus 100 ~~~~i~~~~~~r~~~~~~~iiD 121 (159)
T d1gpja2 100 HVDDVREALRKRDRRSPILIID 121 (159)
T ss_dssp CHHHHHHHHHHCSSCCCEEEEE
T ss_pred cHhhhHHHHHhcccCCCeEEEe
Confidence 1344454443222234444444
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.93 E-value=2.4e-05 Score=61.17 Aligned_cols=67 Identities=15% Similarity=0.175 Sum_probs=52.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec--------------cCc-cccCCCCEEEEe
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--------------KWT-EATQKFPYVIFC 149 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~--------------~d~-~~~~~~D~Vi~~ 149 (272)
+||.|+|+|.+|..++..|.++ ||+|++++|++++.+.+...+..... .|. ++++++|+||.+
T Consensus 2 k~iaIiGaG~~G~~~A~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~ 79 (184)
T d1bg6a2 2 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 79 (184)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence 6899999999999999999999 99999999998877766544322211 111 357899999998
Q ss_pred cCCC
Q 024143 150 APPS 153 (272)
Q Consensus 150 a~~~ 153 (272)
....
T Consensus 80 v~~~ 83 (184)
T d1bg6a2 80 VPAI 83 (184)
T ss_dssp SCGG
T ss_pred Echh
Confidence 7643
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=97.91 E-value=5.3e-05 Score=62.90 Aligned_cols=70 Identities=13% Similarity=0.063 Sum_probs=48.3
Q ss_pred cCCCeEEEEcC-cH--HHHHHHHHHHhcCCCCeEEEEecCCcch-hhhhh-CC--ceeeccCc---c-------------
Q 024143 82 VGENDLLIVGP-GV--LGRLVAEQWRQEHPGCQIYGQTMTADHH-DELIN-MG--ITPSLKWT---E------------- 138 (272)
Q Consensus 82 ~~~~~IlItGa-Gf--iG~~l~~~L~~~~~g~~V~~~~R~~~~~-~~l~~-~~--i~~~~~d~---~------------- 138 (272)
+..|++||||+ |- ||++++++|.++ |++|+...|+..+. +.+.+ .+ ...+..|. +
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~--Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~ 81 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI 81 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHc--CCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcc
Confidence 34578999996 65 999999999999 99999999986654 22322 11 22333332 0
Q ss_pred -ccCCCCEEEEecCCC
Q 024143 139 -ATQKFPYVIFCAPPS 153 (272)
Q Consensus 139 -~~~~~D~Vi~~a~~~ 153 (272)
.....|+++|+++..
T Consensus 82 ~~~~~ld~~i~~ag~~ 97 (268)
T d2h7ma1 82 GAGNKLDGVVHSIGFM 97 (268)
T ss_dssp CTTCCEEEEEECCCCC
T ss_pred ccCCCcceeeeccccc
Confidence 134679999999853
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.89 E-value=6.8e-05 Score=61.08 Aligned_cols=36 Identities=19% Similarity=0.307 Sum_probs=32.6
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~ 122 (272)
|++||||+ +-||+.++++|.++ |++|++++|+++..
T Consensus 2 K~alITGas~GIG~aiA~~la~~--Ga~V~i~~~~~~~~ 38 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKAR--GYRVVVLDLRREGE 38 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCCSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcccc
Confidence 68999996 89999999999999 99999999987654
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.88 E-value=1.6e-05 Score=66.87 Aligned_cols=69 Identities=7% Similarity=-0.059 Sum_probs=49.3
Q ss_pred CeE-EEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhhC--CceeeccCc---c-----------ccCC
Q 024143 85 NDL-LIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINM--GITPSLKWT---E-----------ATQK 142 (272)
Q Consensus 85 ~~I-lItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~~--~i~~~~~d~---~-----------~~~~ 142 (272)
++| ||||+ +-||..++++|.+++ |++|+...|++++.+. +... .+..+..|. + ....
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCRLF-SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHS-SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CeEEEECCCCCHHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 455 78896 899999999998741 7899999999876543 3322 244445553 1 2357
Q ss_pred CCEEEEecCCCC
Q 024143 143 FPYVIFCAPPSR 154 (272)
Q Consensus 143 ~D~Vi~~a~~~~ 154 (272)
+|++||+|+...
T Consensus 82 iDiLVnNAGi~~ 93 (275)
T d1wmaa1 82 LDVLVNNAGIAF 93 (275)
T ss_dssp EEEEEECCCCCC
T ss_pred cEEEEEcCCcCC
Confidence 999999999643
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.88 E-value=4.3e-06 Score=64.29 Aligned_cols=67 Identities=15% Similarity=0.139 Sum_probs=51.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|||-|+|.|.+|+.+++.|+++ |++|++.++.+.+.......+........++.+++|+||.|.++.
T Consensus 1 MkIgiIG~G~mG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~diIi~~v~~~ 67 (152)
T d1i36a2 1 LRVGFIGFGEVAQTLASRLRSR--GVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPG 67 (152)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCGG
T ss_pred CEEEEEcHHHHHHHHHHHHHHC--CCeEEEEcCchhHHHHHhhhcccccccHHHHHhhcCeEEEEecCc
Confidence 5899999999999999999999 999999988776655444333333222225778999999998753
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.85 E-value=9.6e-05 Score=62.22 Aligned_cols=36 Identities=22% Similarity=0.243 Sum_probs=31.4
Q ss_pred cCCCeEEEEcC-c--HHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 82 VGENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 82 ~~~~~IlItGa-G--fiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
+..|++||||+ | =||+.++++|.++ |.+|+...|++
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la~~--Ga~Vvi~~~~~ 44 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWVP 44 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCch
Confidence 45589999997 5 5999999999999 99999988853
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.83 E-value=0.00011 Score=56.09 Aligned_cols=69 Identities=12% Similarity=0.146 Sum_probs=51.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhh----hhh------CCceeeccCccccCCCCEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN------MGITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~----l~~------~~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
.+||.|+|+|.+|++++..|..+ +. +++.+++.+++... +.. ..+.....|.+.+.++|+||.+++
T Consensus 6 ~~KI~IiGaG~vG~~~a~~l~~~--~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~daDvvvitag 83 (148)
T d1ldna1 6 GARVVVIGAGFVGASYVFALMNQ--GIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAG 83 (148)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCS
T ss_pred CCeEEEECcCHHHHHHHHHHHhc--CCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccceeEEEecc
Confidence 36899999999999999999998 64 89999988765322 211 122233345578999999999998
Q ss_pred CCC
Q 024143 152 PSR 154 (272)
Q Consensus 152 ~~~ 154 (272)
...
T Consensus 84 ~~~ 86 (148)
T d1ldna1 84 ANQ 86 (148)
T ss_dssp CCC
T ss_pred ccc
Confidence 644
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=97.77 E-value=0.00014 Score=60.77 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=29.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
|+-+||||+ +-||+.++++|.++ |++|+...|+.
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~--Ga~V~i~~~~~ 36 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRS 36 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCC
Confidence 567889996 89999999999999 99999887754
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.72 E-value=4.1e-05 Score=60.04 Aligned_cols=67 Identities=13% Similarity=0.208 Sum_probs=52.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceee----ccC----ccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS----LKW----TEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~----~~d----~~~~~~~D~Vi~~a~~~ 153 (272)
.+|-|+|.|.+|+.+++.|++. ||+|++.+|++++.+.+...+.... ... .+....+|.+|.+....
T Consensus 3 ~nIg~IGlG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~ 77 (176)
T d2pgda2 3 ADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAG 77 (176)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTT
T ss_pred CcEEEEeEhHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCch
Confidence 5799999999999999999999 9999999999998887765443211 011 13577889999988653
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.71 E-value=6.2e-05 Score=57.39 Aligned_cols=41 Identities=29% Similarity=0.265 Sum_probs=35.9
Q ss_pred cCCCeEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCCcchhh
Q 024143 82 VGENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE 124 (272)
Q Consensus 82 ~~~~~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~ 124 (272)
..|+||.|+| .|.+|+.+++.|.+. ||+|.+.+|++.....
T Consensus 7 ~~~~kI~iIGg~G~mG~~la~~L~~~--G~~V~~~d~~~~~~~~ 48 (152)
T d2pv7a2 7 SDIHKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWAVAE 48 (152)
T ss_dssp TTCCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGGGHH
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHc--CCCcEecccccccccc
Confidence 3578999999 799999999999999 9999999998765443
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.69 E-value=9.4e-06 Score=64.89 Aligned_cols=69 Identities=13% Similarity=0.123 Sum_probs=52.1
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCcee-------------eccCc-cccCCCCEEE
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-------------SLKWT-EATQKFPYVI 147 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~-------------~~~d~-~~~~~~D~Vi 147 (272)
+.|+||.|+|+|..|.+++..|.+. ||+|+...|+++..+.+...+... ...|. ++++++|+||
T Consensus 5 ~~m~KI~ViGaG~wGtAlA~~La~~--g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~ii 82 (189)
T d1n1ea2 5 LYLNKAVVFGSGAFGTALAMVLSKK--CREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIIL 82 (189)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHTT--EEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEE
T ss_pred ceeceEEEECCCHHHHHHHHHHHHc--CCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEE
Confidence 4567899999999999999999999 999999999887766554322111 11122 4678999999
Q ss_pred EecCC
Q 024143 148 FCAPP 152 (272)
Q Consensus 148 ~~a~~ 152 (272)
.+.+.
T Consensus 83 iavPs 87 (189)
T d1n1ea2 83 FVIPT 87 (189)
T ss_dssp ECSCH
T ss_pred EcCcH
Confidence 88764
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.63 E-value=0.00028 Score=53.33 Aligned_cols=70 Identities=10% Similarity=0.084 Sum_probs=46.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhhC-----CceeeccCccccCCCCEEEEecCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINM-----GITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~~-----~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
+||.|+|+|.+|+.++-.|..+.-..+++.+++.+++... +... ......+|.+.+.++|+|+.+|+...
T Consensus 2 ~KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~~ 80 (142)
T d1y6ja1 2 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 80 (142)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCCceEEEeccccc
Confidence 6899999999999999999988222389999988765322 2111 11122234567899999999998654
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.60 E-value=0.00041 Score=52.26 Aligned_cols=70 Identities=13% Similarity=-0.042 Sum_probs=49.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h-----CCceeeccCccccCCCCEEEEecCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N-----MGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~-----~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
|||.|+|+|.+|+.++..|..+.-..++..+++++++..... . ........|.++++++|+||.+++...
T Consensus 1 mKI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~~ 79 (140)
T d1a5za1 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVPQ 79 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCCCEEEEeccccc
Confidence 589999999999999999988822348999998865543211 1 112222344567999999999998654
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.60 E-value=0.0006 Score=51.35 Aligned_cols=70 Identities=13% Similarity=0.093 Sum_probs=50.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h------CCceee-ccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N------MGITPS-LKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~------~~i~~~-~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|||.|+|+|.+|+.++..|.......++..+++++++..... . ...... ..|.+++.++|+|+.+++..
T Consensus 1 mKI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~dadvvvitag~~ 80 (142)
T d1guza1 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAGLP 80 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCCeEEEEEEecC
Confidence 589999999999999999998822259999999876543211 1 112222 23446789999999999864
Q ss_pred C
Q 024143 154 R 154 (272)
Q Consensus 154 ~ 154 (272)
.
T Consensus 81 ~ 81 (142)
T d1guza1 81 R 81 (142)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.57 E-value=0.00063 Score=52.39 Aligned_cols=70 Identities=17% Similarity=0.074 Sum_probs=51.0
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhh----hhhC----C--ceeeccCccccCCCCEEEEec
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM----G--ITPSLKWTEATQKFPYVIFCA 150 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~----l~~~----~--i~~~~~d~~~~~~~D~Vi~~a 150 (272)
..+||.|+|+|.+|+.++-.|..+ |. ++..+++++++... +... + ......|.+.+.++|+||.+|
T Consensus 19 ~~~KV~IIGaG~VG~~~A~~l~~~--~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~adiVVitA 96 (160)
T d1i0za1 19 PNNKITVVGVGQVGMACAISILGK--SLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTA 96 (160)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCSEEEECC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc--CCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccccEEEEec
Confidence 446999999999999999999999 76 89999987655421 2111 1 111223456789999999999
Q ss_pred CCCC
Q 024143 151 PPSR 154 (272)
Q Consensus 151 ~~~~ 154 (272)
+...
T Consensus 97 g~~~ 100 (160)
T d1i0za1 97 GVRQ 100 (160)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 8644
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.56 E-value=0.0001 Score=56.16 Aligned_cols=68 Identities=13% Similarity=-0.004 Sum_probs=49.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhh----C--CceeeccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN----M--GITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~----~--~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
+||.|+|+|.+|+.++-.|..+.--.+++.+++++++... +.. . .......|.+.++++|+||.+|+.
T Consensus 2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~adiVVitaG~ 79 (146)
T d1hyha1 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGN 79 (146)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccccEEEEeccc
Confidence 6899999999999999999988212489999988765422 111 1 122333455689999999999985
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.54 E-value=0.00049 Score=51.96 Aligned_cols=68 Identities=16% Similarity=-0.003 Sum_probs=49.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchhh----hhh----CC--ceee-ccCccccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN----MG--ITPS-LKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~----l~~----~~--i~~~-~~d~~~~~~~D~Vi~~a~ 151 (272)
|||.|+|+|.+|++++-.|..+ +. ++..+++++++... +.. .. .... ..|.+.+.++|+||.+++
T Consensus 1 MKI~IIGaG~VG~~~a~~l~~~--~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~~~adiVvitag 78 (142)
T d1ojua1 1 MKLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAG 78 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHhccccEEEEecc
Confidence 6899999999999999999988 54 79999988765422 111 11 1222 235578999999999998
Q ss_pred CCC
Q 024143 152 PSR 154 (272)
Q Consensus 152 ~~~ 154 (272)
...
T Consensus 79 ~~~ 81 (142)
T d1ojua1 79 LAR 81 (142)
T ss_dssp CCC
T ss_pred ccC
Confidence 543
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.53 E-value=3.6e-05 Score=59.98 Aligned_cols=40 Identities=18% Similarity=0.243 Sum_probs=35.1
Q ss_pred CeEEEE-cCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh
Q 024143 85 NDLLIV-GPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI 126 (272)
Q Consensus 85 ~~IlIt-GaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~ 126 (272)
|||.|+ |+|.+|+.|++.|.+. ||+|+..+|++++.+.+.
T Consensus 1 Mki~vigGaG~iG~alA~~la~~--G~~V~l~~R~~e~~~~l~ 41 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAKA 41 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH
Confidence 578888 6899999999999999 999999999988766543
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.50 E-value=8.3e-05 Score=61.21 Aligned_cols=71 Identities=15% Similarity=0.200 Sum_probs=47.2
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchh-hhhh-CCceeeccC--ccccCCCCEEEEecCCCCCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-ELIN-MGITPSLKW--TEATQKFPYVIFCAPPSRSL 156 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~-~l~~-~~i~~~~~d--~~~~~~~D~Vi~~a~~~~~~ 156 (272)
||.|||||+ +-||+.++++|.++ |++|++++|+..+.. .+.. .+......+ .+.....|+++++|+.....
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~--Ga~V~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~ 76 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT 76 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECChHHHHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCcH
Confidence 677899996 89999999999999 999999998754321 1110 000000001 12345689999999865543
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.50 E-value=0.00073 Score=51.05 Aligned_cols=70 Identities=16% Similarity=0.207 Sum_probs=49.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhh----hhhC----C-ceee-ccCccccCCCCEEEEecCCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINM----G-ITPS-LKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~----l~~~----~-i~~~-~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
.||.|+|+|.+|++++..|..+.-..+++.+++++++... +... + .... ..+.+.+.++|+||.+++...
T Consensus 2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~daDvVVitaG~~~ 81 (143)
T d1llda1 2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPRQ 81 (143)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCCcEEEEeccccc
Confidence 5899999999999999999988222389999988765432 2211 1 1121 123467889999999999754
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.49 E-value=6.3e-05 Score=57.39 Aligned_cols=69 Identities=12% Similarity=0.070 Sum_probs=43.9
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcC--CCCeEEEEecCCcchhhhh--hCCcee-eccCccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEH--PGCQIYGQTMTADHHDELI--NMGITP-SLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~--~g~~V~~~~R~~~~~~~l~--~~~i~~-~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|+||.|+|+ |++|+.+++.|++++ |-.+++.+.++......+. ...... ...+.+.+.++|++|.|++.
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~~~~~~DivF~a~~~ 75 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEALKALDIIVTCQGG 75 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHHHHTCSEEEECSCH
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchhhhhcCcEEEEecCc
Confidence 789999997 999999999888753 3457777766533221111 111111 11222356799999999864
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.47 E-value=0.00093 Score=50.31 Aligned_cols=68 Identities=12% Similarity=0.146 Sum_probs=48.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhh----h------hCCceee-ccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL----I------NMGITPS-LKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l----~------~~~i~~~-~~d~~~~~~~D~Vi~~a~~ 152 (272)
+||.|+|+|.+|+.++-.|..+ +. ++..++..+++.... . ....... ..|.+.+.++|+||.+|+.
T Consensus 2 ~KI~IIGaG~VG~~~A~~l~~~--~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~~advvvitag~ 79 (142)
T d1uxja1 2 KKISIIGAGFVGSTTAHWLAAK--ELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGA 79 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhcCCCEEEEeeec
Confidence 6899999999999999999888 54 889999877654321 1 1111222 2345678999999999986
Q ss_pred CC
Q 024143 153 SR 154 (272)
Q Consensus 153 ~~ 154 (272)
..
T Consensus 80 ~~ 81 (142)
T d1uxja1 80 PR 81 (142)
T ss_dssp C-
T ss_pred cC
Confidence 43
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=97.44 E-value=0.00032 Score=49.42 Aligned_cols=73 Identities=19% Similarity=0.210 Sum_probs=55.9
Q ss_pred CCCcCCCeEEEEcCcHHH-HHHHHHHHhcCCCCeEEEEecCCc-chhhhhhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 79 SGGVGENDLLIVGPGVLG-RLVAEQWRQEHPGCQIYGQTMTAD-HHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 79 ~~~~~~~~IlItGaGfiG-~~l~~~L~~~~~g~~V~~~~R~~~-~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
|....+++|.++|.|-+| +.||+.|+++ |++|.+.++... ....+...|+....+.. +.+.++|.||...+..
T Consensus 3 ~~~~~~~~ihfiGigG~GMs~LA~~L~~~--G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~i~~~d~vV~S~AI~ 78 (96)
T d1p3da1 3 PEMRRVQQIHFIGIGGAGMSGIAEILLNE--GYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSSAIK 78 (96)
T ss_dssp CCCTTCCEEEEETTTSTTHHHHHHHHHHH--TCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGGTTCSEEEECTTSC
T ss_pred ccchhCCEEEEEEECHHHHHHHHHHHHhC--CCEEEEEeCCCChhhhHHHHCCCeEEECCccccCCCCCEEEECCCcC
Confidence 334556899999976666 6789999999 999999998743 34566678888776543 4578899999887754
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.36 E-value=0.00034 Score=53.59 Aligned_cols=70 Identities=10% Similarity=0.047 Sum_probs=48.6
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhh----h----CCce--ee-ccCc-cccCCCCEEEE
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELI----N----MGIT--PS-LKWT-EATQKFPYVIF 148 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~----~----~~i~--~~-~~d~-~~~~~~D~Vi~ 148 (272)
.+++||.|+|+|.+|+.++..|... +. +++.++.++++..... . .+.. .. ..+. ++++++|+|+.
T Consensus 5 ~k~~KI~IIGaG~VG~~lA~~l~~~--~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvi 82 (154)
T d1pzga1 5 QRRKKVAMIGSGMIGGTMGYLCALR--ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIV 82 (154)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC--CCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEE
Confidence 3457999999999999999988887 64 8999988876543221 1 1111 11 1122 46889999999
Q ss_pred ecCCC
Q 024143 149 CAPPS 153 (272)
Q Consensus 149 ~a~~~ 153 (272)
+++..
T Consensus 83 tag~~ 87 (154)
T d1pzga1 83 TAGLT 87 (154)
T ss_dssp CCSCS
T ss_pred ecccc
Confidence 99753
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.31 E-value=0.00094 Score=51.30 Aligned_cols=87 Identities=13% Similarity=0.155 Sum_probs=60.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec-cCc-----c---------ccCCCCEEEEe
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-KWT-----E---------ATQKFPYVIFC 149 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~-~d~-----~---------~~~~~D~Vi~~ 149 (272)
.+|+|+|+|.+|...++.++.. |.+|+++++++++.+..++.+..... .+. . .-.++|+||.|
T Consensus 28 ~~vlV~G~G~vG~~~~~~ak~~--Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~ 105 (170)
T d1e3ja2 28 TTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 105 (170)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CEEEEEcccccchhhHhhHhhh--cccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeeec
Confidence 5899999999999999888888 99999999999888777666654322 111 0 13579999999
Q ss_pred cCCCCCCChHHHHHHHHHHhcCCCeEEEEe
Q 024143 150 APPSRSLDYPGDVRLAALSWNGEGSFLFTS 179 (272)
Q Consensus 150 a~~~~~~~~~~~~~~l~~~~~gvkr~V~~S 179 (272)
++.. ..+...+.....-.++++++
T Consensus 106 ~g~~------~~~~~a~~~~~~~G~iv~~G 129 (170)
T d1e3ja2 106 SGNE------KCITIGINITRTGGTLMLVG 129 (170)
T ss_dssp SCCH------HHHHHHHHHSCTTCEEEECS
T ss_pred CCCh------HHHHHHHHHHhcCCceEEEe
Confidence 8742 23344332223345777665
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.31 E-value=0.0013 Score=49.79 Aligned_cols=68 Identities=13% Similarity=0.099 Sum_probs=47.6
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCC--CeEEEEecCCcc--hh----hhhh------CCceeec---cCccccCCCCEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADH--HD----ELIN------MGITPSL---KWTEATQKFPYV 146 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g--~~V~~~~R~~~~--~~----~l~~------~~i~~~~---~d~~~~~~~D~V 146 (272)
|||.|+|+ |.+|+.++..|..+ + .++..+++.++. .+ .+.. ...+... .|.+.++++|+|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~--~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvV 78 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKE--PFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVV 78 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTC--TTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEE
Confidence 58999996 99999999999988 6 499999987532 11 1211 1122221 134678899999
Q ss_pred EEecCCCC
Q 024143 147 IFCAPPSR 154 (272)
Q Consensus 147 i~~a~~~~ 154 (272)
|.+|+...
T Consensus 79 VitAG~~~ 86 (145)
T d1hyea1 79 IITSGVPR 86 (145)
T ss_dssp EECCSCCC
T ss_pred EEeccccc
Confidence 99998644
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.30 E-value=0.00025 Score=56.23 Aligned_cols=65 Identities=17% Similarity=0.251 Sum_probs=46.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeecc------------------C-ccccCCCCE
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK------------------W-TEATQKFPY 145 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~------------------d-~~~~~~~D~ 145 (272)
|||.|+|.||+|..++..| ++ |++|++++-++.+.+.+.+ +..+... + .....++|+
T Consensus 1 MkI~ViGlG~vGl~~a~~~-a~--g~~V~g~Din~~~v~~l~~-g~~p~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~i 76 (196)
T d1dlja2 1 MKIAVAGSGYVGLSLGVLL-SL--QNEVTIVDILPSKVDKINN-GLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAEL 76 (196)
T ss_dssp CEEEEECCSHHHHHHHHHH-TT--TSEEEEECSCHHHHHHHHT-TCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSE
T ss_pred CEEEEECCChhHHHHHHHH-HC--CCcEEEEECCHHHHHHHhh-cccccchhhHHHHhhhhhhhhhccchhhhhhhcccc
Confidence 6899999999999998644 78 9999999999888776653 3222110 0 013457898
Q ss_pred EEEecCCC
Q 024143 146 VIFCAPPS 153 (272)
Q Consensus 146 Vi~~a~~~ 153 (272)
++.|.+..
T Consensus 77 i~v~vpt~ 84 (196)
T d1dlja2 77 VIIATPTN 84 (196)
T ss_dssp EEECCCCC
T ss_pred ccccCCcc
Confidence 88887753
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.00022 Score=56.67 Aligned_cols=38 Identities=18% Similarity=0.212 Sum_probs=34.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcch
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~ 122 (272)
..+||.|+|+|.+|+.++..+... |++|+..+++++..
T Consensus 3 ~IkkvaViGaG~mG~~iA~~~a~~--G~~V~l~D~~~~~l 40 (192)
T d1f0ya2 3 IVKHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTEDIL 40 (192)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHH
T ss_pred eeEEEEEECcCHHHHHHHHHHHhC--CCcEEEEECChHHH
Confidence 457999999999999999999999 99999999987643
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.28 E-value=0.0012 Score=50.80 Aligned_cols=70 Identities=17% Similarity=0.100 Sum_probs=50.0
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCC--eEEEEecCCcchh----hhhhC----Cc--eeeccCccccCCCCEEEEe
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHD----ELINM----GI--TPSLKWTEATQKFPYVIFC 149 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~----~l~~~----~i--~~~~~d~~~~~~~D~Vi~~ 149 (272)
..+.||.|+|+|.+|+.++..|..+ +. +++.+++++++.. .+... +. .....|.+.+.++|+||.+
T Consensus 17 ~~~~KI~IIGaG~VG~~~A~~l~~~--~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~adivvit 94 (159)
T d2ldxa1 17 LSRCKITVVGVGDVGMACAISILLK--GLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSKLVIIT 94 (159)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTT--TSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTEEEEEEC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccccEEEEe
Confidence 3446899999999999999999998 54 8999998865532 22211 11 1112344678999999999
Q ss_pred cCCC
Q 024143 150 APPS 153 (272)
Q Consensus 150 a~~~ 153 (272)
++..
T Consensus 95 ag~~ 98 (159)
T d2ldxa1 95 AGAR 98 (159)
T ss_dssp CSCC
T ss_pred cccc
Confidence 9864
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.28 E-value=0.0011 Score=56.81 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=28.2
Q ss_pred CeEEEEcCc---HHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 85 NDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 85 ~~IlItGaG---fiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
+..||||+| =||+.+++.|.++ |.+|+...+..
T Consensus 3 kVAlITGaa~s~GIG~aiA~~la~~--GA~V~i~~~~~ 38 (329)
T d1uh5a_ 3 DICFIAGIGDTNGYGWGIAKELSKR--NVKIIFGIWPP 38 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEECGG
T ss_pred cEEEEeCCCCCChHHHHHHHHHHHc--CCEEEEEeCch
Confidence 567899964 6999999999999 99999887654
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.27 E-value=0.0003 Score=54.35 Aligned_cols=69 Identities=17% Similarity=0.306 Sum_probs=53.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec--c-Ccc----ccCCCCEEEEecCCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--K-WTE----ATQKFPYVIFCAPPSR 154 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~--~-d~~----~~~~~D~Vi~~a~~~~ 154 (272)
..+|+|+|+|.+|...++.++.. |.+|+++++++++.+..++.|.+.+. . +.+ ...++|+|+.|.+...
T Consensus 28 g~~vlI~GaG~vG~~a~q~ak~~--G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~~~~~~ 103 (168)
T d1piwa2 28 GKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLT 103 (168)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCST
T ss_pred CCEEEEECCCCcchhHHHHhhhc--cccccccccchhHHHHhhccCCcEEeeccchHHHHHhhhcccceEEEEecCCc
Confidence 36899999999999998888888 99999999999998877777765432 1 111 3457899999977543
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.25 E-value=0.00066 Score=51.34 Aligned_cols=67 Identities=12% Similarity=0.069 Sum_probs=46.1
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCC--eEEEEecCCcchhhhhhCCc------eeec-cC--ccccCCCCEEEEecCCC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGI------TPSL-KW--TEATQKFPYVIFCAPPS 153 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~--~V~~~~R~~~~~~~l~~~~i------~~~~-~d--~~~~~~~D~Vi~~a~~~ 153 (272)
||.|+|| |.+|++++..|..+ +. +++.++.++.+...+.-... .... .+ .+.++++|+||.+++..
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~--~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~ 79 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNS--PLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP 79 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTC--TTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred eEEEECCCChHHHHHHHHHHhC--CccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcC
Confidence 7999996 99999999999888 64 78888887654332211111 1111 11 24689999999999854
Q ss_pred C
Q 024143 154 R 154 (272)
Q Consensus 154 ~ 154 (272)
.
T Consensus 80 ~ 80 (144)
T d1mlda1 80 R 80 (144)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=97.21 E-value=0.00042 Score=54.64 Aligned_cols=38 Identities=18% Similarity=0.320 Sum_probs=34.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchh
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD 123 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~ 123 (272)
.+||.|+|+|.+|+.++..+... |++|+.++++++..+
T Consensus 4 I~~vaViGaG~mG~~iA~~~a~~--G~~V~l~D~~~~~l~ 41 (186)
T d1wdka3 4 VKQAAVLGAGIMGGGIAYQSASK--GTPILMKDINEHGIE 41 (186)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT--TCCEEEECSSHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHh
Confidence 46899999999999999999999 999999999876543
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=97.18 E-value=0.0012 Score=45.63 Aligned_cols=68 Identities=21% Similarity=0.219 Sum_probs=53.2
Q ss_pred CeEEEEcCcHHH-HHHHHHHHhcCCCCeEEEEecCCc-chhhhhhCCceeecc-CccccCCCCEEEEecCCCC
Q 024143 85 NDLLIVGPGVLG-RLVAEQWRQEHPGCQIYGQTMTAD-HHDELINMGITPSLK-WTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 85 ~~IlItGaGfiG-~~l~~~L~~~~~g~~V~~~~R~~~-~~~~l~~~~i~~~~~-d~~~~~~~D~Vi~~a~~~~ 154 (272)
|||.++|-|=+| +.|++.|+++ |++|.+.++.+. ..+.|+..|+....+ +.+.+.++|.||...+...
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~--G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i~~~d~vV~SsAI~~ 72 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSN--GNDVYGSNIEETERTAYLRKLGIPIFVPHSADNWYDPDLVIKTPAVRD 72 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSCCCCSEEEECTTCCT
T ss_pred cEEEEEeECHHHHHHHHHHHHhC--CCeEEEEeCCCChhHHHHHHCCCeEEeeecccccCCCCEEEEecCcCC
Confidence 689999975555 4689999999 999999999753 356788889887765 3456789999999888643
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.15 E-value=0.00043 Score=52.38 Aligned_cols=69 Identities=10% Similarity=0.086 Sum_probs=43.3
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHh-cCCCCeEEEEecCCcchhhhhhCCceeec--cCccccCCCCEEEEecCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQ-EHPGCQIYGQTMTADHHDELINMGITPSL--KWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~-~~~g~~V~~~~R~~~~~~~l~~~~i~~~~--~d~~~~~~~D~Vi~~a~~ 152 (272)
.++|.|+|+ |++|+.+++.|.+ .||..++..+..+...-..+....-+... .+.+...++|++|.+++.
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~~~~~~~d~vf~a~p~ 74 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDFSSVGLAFFAAAA 74 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCCGGGCSEEEECSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchhhhhccceEEEecCCc
Confidence 368999997 9999999998875 46677888775543222111111111111 122356789999888764
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=97.13 E-value=7.1e-05 Score=56.98 Aligned_cols=64 Identities=19% Similarity=0.132 Sum_probs=42.5
Q ss_pred EEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 87 IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|-++|+|.+|+++++.|.+. ++.+.+..|++++.+.+.+.+........++.+.+|+||.|.++
T Consensus 2 IgfIG~G~mg~~l~~~L~~~--~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~d 65 (153)
T d2i76a2 2 LNFVGTGTLTRFFLECLKDR--YEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPD 65 (153)
T ss_dssp CEEESCCHHHHHHHHTTC------CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCT
T ss_pred EEEEeCcHHHHHHHHHHHhC--CCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEeccc
Confidence 45789999999999988665 55446789999888887665433332233578899999999875
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.12 E-value=0.00057 Score=52.94 Aligned_cols=69 Identities=17% Similarity=0.187 Sum_probs=51.4
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-----CceeeccCccccCCCCEEEEecCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----GITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-----~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
..++|+|+|+|-.++.++..|.+. |.+|+.+.|+.++.+.+... .++....+......+|+||+|.+..
T Consensus 17 ~~k~vlIlGaGGaarai~~al~~~--g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~dliIN~Tp~G 90 (170)
T d1nyta1 17 PGLRILLIGAGGASRGVLLPLLSL--DCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSG 90 (170)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCG
T ss_pred CCCEEEEECCcHHHHHHHHHhccc--ceEEEeccchHHHHHHHHHHHhhcccccccccccccccccceeecccccC
Confidence 347899999999999999999999 99999999998877665432 1222222222345789999998754
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=97.12 E-value=0.00015 Score=56.68 Aligned_cols=42 Identities=24% Similarity=0.337 Sum_probs=38.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM 128 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~ 128 (272)
|||-|+|.|.+|..+++.|++. ||+|.+.+|++++.+.+.+.
T Consensus 2 MkIGvIGlG~MG~~ma~~L~~~--G~~V~~~dr~~~~~~~l~~~ 43 (178)
T d1pgja2 2 MDVGVVGLGVMGANLALNIAEK--GFKVAVFNRTYSKSEEFMKA 43 (178)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHH
T ss_pred CEEEEEeehHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHc
Confidence 5899999999999999999999 99999999999888776544
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.11 E-value=0.00082 Score=50.89 Aligned_cols=66 Identities=8% Similarity=0.093 Sum_probs=51.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcch----hhhhhCCceeeccCc---c-----ccCCCCEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH----DELINMGITPSLKWT---E-----ATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~----~~l~~~~i~~~~~d~---~-----~~~~~D~Vi~~a~ 151 (272)
+.+|+|.|.|-+|..+++.|.++ |++|++++.++++. ..+...++..+.+|. + -++.+|.||-+..
T Consensus 3 knHiII~G~g~~g~~l~~~L~~~--~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 3 KDHFIVCGHSILAINTILQLNQR--GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHc--CCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence 35799999999999999999999 99999999887542 333345777877764 1 3568999987765
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.08 E-value=0.00033 Score=54.94 Aligned_cols=67 Identities=10% Similarity=0.059 Sum_probs=47.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcc--hhhhhhCCce-----------eec-cCc-cccCCCCEEEEe
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMGIT-----------PSL-KWT-EATQKFPYVIFC 149 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~--~~~l~~~~i~-----------~~~-~d~-~~~~~~D~Vi~~ 149 (272)
|||.|+|+|..|..++..|.+. |++|+...|..+. ...+...... ... .|. ++++++|+||.+
T Consensus 1 MkI~ViGaG~~GtalA~~la~~--g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~a 78 (180)
T d1txga2 1 MIVSILGAGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG 78 (180)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcc
Confidence 6899999999999999999999 9999999885432 3333221111 111 111 367899999998
Q ss_pred cCCC
Q 024143 150 APPS 153 (272)
Q Consensus 150 a~~~ 153 (272)
.+..
T Consensus 79 vps~ 82 (180)
T d1txga2 79 VSTD 82 (180)
T ss_dssp SCGG
T ss_pred cchh
Confidence 8753
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.06 E-value=0.00051 Score=53.24 Aligned_cols=65 Identities=14% Similarity=0.185 Sum_probs=52.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeecc--Cc----cccCCCCEEEEecC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK--WT----EATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~--d~----~~~~~~D~Vi~~a~ 151 (272)
.+|||.|+ |-+|...++.++.. |.+|+++++++++.+.+++.|.+.... +. ....++|+||.+.+
T Consensus 29 ~~VlI~ga~G~vG~~aiqlak~~--G~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~G 100 (171)
T d1iz0a2 29 EKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRG 100 (171)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEECSC
T ss_pred CEEEEEeccccchhhhhhhhccc--ccccccccccccccccccccccceeeehhhhhhhhhccccccccccccc
Confidence 68999996 99999999988888 999999999988888887777755431 11 13568999999876
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.06 E-value=0.00087 Score=46.53 Aligned_cols=69 Identities=12% Similarity=0.094 Sum_probs=49.3
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcc--hhhhhhCCceeeccC--ccccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMGITPSLKW--TEATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~--~~~l~~~~i~~~~~d--~~~~~~~D~Vi~~a~~~ 153 (272)
+..+||+|+|.|-.|..+++.|.++ |++|++.+.++.. ...+ ..++...... .+.+.++|.||..-+..
T Consensus 3 ~~~K~v~ViGlG~sG~s~a~~L~~~--g~~v~~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi~SPGi~ 75 (93)
T d2jfga1 3 YQGKNVVIIGLGLTGLSCVDFFLAR--GVTPRVMDTRMTPPGLDKL-PEAVERHTGSLNDEWLMAADLIVASPGIA 75 (93)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHT--TCCCEEEESSSSCTTGGGS-CTTSCEEESBCCHHHHHHCSEEEECTTSC
T ss_pred cCCCEEEEEeECHHHHHHHHHHHHC--CCEEEEeeCCcCchhHHHH-hhccceeecccchhhhccCCEEEECCCCC
Confidence 3457899999999999999999999 9999999986542 2222 2333333322 23567889998876654
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.05 E-value=0.00062 Score=52.45 Aligned_cols=68 Identities=13% Similarity=0.249 Sum_probs=52.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec--cCc----cccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT----EATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~--~d~----~~~~~~D~Vi~~a~~~ 153 (272)
..+|+|.|+|-+|...++.++.. |.+++++++++++.+..+..|.+.+. .+. ...+++|+||.+.+..
T Consensus 31 G~~VlI~GaG~vG~~a~qlak~~--Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~~~~~~~~~~~D~vid~~g~~ 104 (168)
T d1uufa2 31 GKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAP 104 (168)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSC
T ss_pred CCEEEEeccchHHHHHHHHhhcc--cccchhhccchhHHHHHhccCCcEEEECchhhHHHHhcCCCceeeeeeecc
Confidence 36899999999999999888888 99999999988887766666665433 111 2456899999998753
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=97.00 E-value=0.0011 Score=53.06 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=54.4
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
+..++|.|-|.|.+|+++++.|.+. |.+|++.+.++.........+.+....+.-...++|+++-||....
T Consensus 25 L~gk~v~IqG~G~VG~~~A~~L~~~--Gakvvv~d~d~~~~~~~~~~g~~~~~~~~~~~~~~DI~iPcA~~~~ 95 (201)
T d1c1da1 25 LDGLTVLVQGLGAVGGSLASLAAEA--GAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAMGGV 95 (201)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECSCSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEecchHHHHHHHHhhcccccCccccccccceeeeccccccc
Confidence 4557999999999999999999999 9999999888777666555555554333223458999998886543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.99 E-value=0.0029 Score=48.58 Aligned_cols=87 Identities=16% Similarity=0.260 Sum_probs=60.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhCCceeecc----Cc-c--------ccCCCCEEEEec
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLK----WT-E--------ATQKFPYVIFCA 150 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~~i~~~~~----d~-~--------~~~~~D~Vi~~a 150 (272)
.+|+|+|+|.+|...+..+... |. +|++.++++++.+..++.|.+.... +. + .-.++|+||.|.
T Consensus 28 d~VlI~G~G~iG~~~~~~a~~~--G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~ 105 (171)
T d1pl8a2 28 HKVLVCGAGPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 105 (171)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CEEEEECCCccHHHHHHHHHHc--CCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEecc
Confidence 5899999999999999988888 88 7999999998887777777654432 11 0 124799999999
Q ss_pred CCCCCCChHHHHHHHHHHhcCCCeEEEEe
Q 024143 151 PPSRSLDYPGDVRLAALSWNGEGSFLFTS 179 (272)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~~gvkr~V~~S 179 (272)
+.. ..++..+.....-.++++++
T Consensus 106 G~~------~~~~~a~~~~~~gG~iv~~G 128 (171)
T d1pl8a2 106 GAE------ASIQAGIYATRSGGTLVLVG 128 (171)
T ss_dssp CCH------HHHHHHHHHSCTTCEEEECS
T ss_pred CCc------hhHHHHHHHhcCCCEEEEEe
Confidence 852 12333332223345777765
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.99 E-value=0.0017 Score=49.28 Aligned_cols=67 Identities=15% Similarity=0.122 Sum_probs=47.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhh----h------CCceeec-cCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELI----N------MGITPSL-KWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~----~------~~i~~~~-~d~~~~~~~D~Vi~~a~~ 152 (272)
+||.|+|+|.+|++++..|..+ +. ++..+++.+++..... . ....... .+.+.++++|+||.+++.
T Consensus 4 ~KI~IIGaG~VG~~~a~~l~~~--~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvitag~ 81 (150)
T d1t2da1 4 AKIVLVGSGMIGGVMATLIVQK--NLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGF 81 (150)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEEeccc
Confidence 6999999999999999877776 43 8888998776543211 1 1111211 234678999999999985
Q ss_pred C
Q 024143 153 S 153 (272)
Q Consensus 153 ~ 153 (272)
.
T Consensus 82 ~ 82 (150)
T d1t2da1 82 T 82 (150)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.98 E-value=0.00047 Score=52.41 Aligned_cols=68 Identities=13% Similarity=0.066 Sum_probs=41.0
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhc--CCCCeEEEEecCCc--chhhhhhCC-ceeeccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQE--HPGCQIYGQTMTAD--HHDELINMG-ITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~--~~g~~V~~~~R~~~--~~~~l~~~~-i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
|||.|+|+ ||+|+.|++.|++. ||..++..++.+.. +........ ......+.+.+.++|+||.|.+.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~~~~~~~~DvvF~alp~ 74 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIESLKQLDAVITCQGG 74 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTCHHHHTTCSEEEECSCH
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccchhhhccccEEEEecCc
Confidence 58999997 99999999988763 34457766554322 111111000 11111222457899999998874
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.97 E-value=0.00083 Score=52.17 Aligned_cols=70 Identities=20% Similarity=0.114 Sum_probs=51.7
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-----CceeeccCccccCCCCEEEEecCCCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----GITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-----~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
..++|+|+|+|-.++.++..|.+. +-+|+.+.|+.++.+.+... .+.....+......+|+||+|.+...
T Consensus 17 ~~k~vlIlGaGGaarai~~aL~~~--~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~diiIN~tp~g~ 91 (171)
T d1p77a1 17 PNQHVLILGAGGATKGVLLPLLQA--QQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 91 (171)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred CCCEEEEECCcHHHHHHHHHHccc--CceeeeccchHHHHHHHHHHHhhccccchhhhccccccccceeeecccccc
Confidence 447899999999999999999987 78999999998877655331 22233333234678999999987643
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.92 E-value=0.00069 Score=52.85 Aligned_cols=66 Identities=17% Similarity=0.191 Sum_probs=51.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhCCceeec--cCc---c---------ccCCCCEEEEe
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL--KWT---E---------ATQKFPYVIFC 149 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~~i~~~~--~d~---~---------~~~~~D~Vi~~ 149 (272)
.+|+|+|+|-+|...++.++.. |. +|+++++++++.+..++.|.+.+. .+. + .-.++|+||.|
T Consensus 30 ~~VlV~GaG~iG~~~~~~ak~~--Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid~ 107 (182)
T d1vj0a2 30 KTVVIQGAGPLGLFGVVIARSL--GAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEA 107 (182)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred CEEEEECCCccchhheeccccc--ccccccccccccccccccccccceEEEeccccchHHHHHHHHHhhCCCCceEEeec
Confidence 6899999999999999988888 97 799999999888777777754432 111 0 12468999999
Q ss_pred cCC
Q 024143 150 APP 152 (272)
Q Consensus 150 a~~ 152 (272)
++.
T Consensus 108 vG~ 110 (182)
T d1vj0a2 108 TGD 110 (182)
T ss_dssp SSC
T ss_pred CCc
Confidence 875
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=96.89 E-value=0.0016 Score=51.32 Aligned_cols=71 Identities=10% Similarity=-0.004 Sum_probs=50.8
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|..- |.+|.+.+|...........++.....-.+.++.+|+|+.+.+...
T Consensus 42 l~~~~vgiiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~ 112 (188)
T d2naca1 42 LEAMHVGTVAAGRIGLAVLRRLAPF--DVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHP 112 (188)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCT
T ss_pred ccccceeeccccccchhhhhhhhcc--CceEEEEeeccccccccccccccccCCHHHHHHhccchhhcccccc
Confidence 4457999999999999999999998 9999999987554433222333332211256788999977776543
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=96.86 E-value=0.00067 Score=52.98 Aligned_cols=93 Identities=14% Similarity=0.279 Sum_probs=64.4
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec--cCc---c------ccCCCCEEEEecC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT---E------ATQKFPYVIFCAP 151 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~--~d~---~------~~~~~D~Vi~~a~ 151 (272)
-.+|||+|+ |-+|...++..... |.+|+++++++++.+.++..+..... .+. + .-.++|+||.+.+
T Consensus 30 G~~VlV~ga~ggvG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG 107 (182)
T d1v3va2 30 GETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG 107 (182)
T ss_dssp SCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCEEEEEeCCCchhHHHHHHHHcc--CCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecC
Confidence 368999997 99999999988888 99999999998888888777765433 221 1 2357999999987
Q ss_pred CCCCCChHHHHHHHHHHhcCCCeEEEEecceeec
Q 024143 152 PSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIYD 185 (272)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~~gvkr~V~~SS~~vYg 185 (272)
.. .....+.+...-.+++.++..+.|+
T Consensus 108 ~~-------~~~~~~~~l~~~G~~v~~G~~~~~~ 134 (182)
T d1v3va2 108 GE-------FLNTVLSQMKDFGKIAICGAISVYN 134 (182)
T ss_dssp HH-------HHHHHGGGEEEEEEEEECCCGGGTT
T ss_pred ch-------hhhhhhhhccCCCeEEeecceeecc
Confidence 31 2233332222235677666555544
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.86 E-value=0.00071 Score=52.31 Aligned_cols=66 Identities=11% Similarity=0.173 Sum_probs=49.5
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhC-CceeeccCccccCCCCEEEEecCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM-GITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~-~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
.++|+|+|+|-.++.++..|.+. |. +|..+.|++++.+.+... +...... ....++|+||+|-+..
T Consensus 17 ~~~vlIlGaGGaarai~~aL~~~--g~~~I~I~nR~~~ka~~L~~~~~~~~~~~--~~~~~~DliINaTpiG 84 (167)
T d1npya1 17 NAKVIVHGSGGMAKAVVAAFKNS--GFEKLKIYARNVKTGQYLAALYGYAYINS--LENQQADILVNVTSIG 84 (167)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHT--TCCCEEEECSCHHHHHHHHHHHTCEEESC--CTTCCCSEEEECSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEecccHHHHHHHHHhhhhhhhhc--ccccchhhheeccccC
Confidence 36899999999999999999999 86 899999998887766432 3322211 1235789999987753
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.86 E-value=0.0059 Score=45.75 Aligned_cols=69 Identities=14% Similarity=0.078 Sum_probs=45.9
Q ss_pred eEEEEc-CcHHHHHHHHHHHhcCCCCeEEEEecCC--cchh----hhhh-----CCceeeccCccccCCCCEEEEecCCC
Q 024143 86 DLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTA--DHHD----ELIN-----MGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 86 ~IlItG-aGfiG~~l~~~L~~~~~g~~V~~~~R~~--~~~~----~l~~-----~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
||.|+| +|.+|++++..|..++---++..++... ++.. .+.. ........+.+.+.++|+|+.+|+..
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~~~aDiVvitaG~~ 81 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGIP 81 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHHhhhcCEEEEecccc
Confidence 799999 5999999999999982223788887532 2211 1211 11222334556789999999999854
Q ss_pred C
Q 024143 154 R 154 (272)
Q Consensus 154 ~ 154 (272)
.
T Consensus 82 ~ 82 (142)
T d1o6za1 82 R 82 (142)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Type I fatty acid synthase ACP domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.79 E-value=3e-05 Score=52.47 Aligned_cols=47 Identities=11% Similarity=-0.071 Sum_probs=35.9
Q ss_pred cceeeecccCcc-ccc---ccccccCCcchhhhcc-ccccccc--cccccceec
Q 024143 2 GTISCTNTVSLN-GAC---TRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVA 48 (272)
Q Consensus 2 ~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~ 48 (272)
..+||.++.--. ++. ++|||+|++|++|.+| -.+++.| ++|.+.+|.
T Consensus 10 ~~~va~~Lgi~~~~~I~~~~~f~~lG~DSl~a~el~~~i~~~~g~~l~~~~l~~ 63 (76)
T d2pnga1 10 VKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREVRQ 63 (76)
T ss_dssp GGTHHHHHTCSSCTTSCSSSCHHHHTCSSHHHHHHHHHHHHHTCCCCCHHHHTT
T ss_pred HHHHHHHhccCCHhhCCCCCCHHHhCCcHHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 456777775322 222 9999999999999999 9999998 777777664
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.78 E-value=0.005 Score=46.32 Aligned_cols=70 Identities=17% Similarity=0.189 Sum_probs=44.8
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhc-CCCCeEEEEecCCcchh---hhhhCC----ceeecc--CccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTMTADHHD---ELINMG----ITPSLK--WTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~-~~g~~V~~~~R~~~~~~---~l~~~~----i~~~~~--d~~~~~~~D~Vi~~a~~~ 153 (272)
|||.|+|+ |.+|++++-.|..+ .-..++..++..+.... .+.... ...+.+ +.++++++|+||.+++..
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~~ 80 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVR 80 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSCC
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCcc
Confidence 68999995 99999999887543 12568998887542211 122211 111111 224688999999999864
Q ss_pred C
Q 024143 154 R 154 (272)
Q Consensus 154 ~ 154 (272)
.
T Consensus 81 ~ 81 (145)
T d2cmda1 81 R 81 (145)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.76 E-value=0.0012 Score=50.75 Aligned_cols=68 Identities=15% Similarity=0.077 Sum_probs=50.1
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
+.-|+++|+|.|.+|+-+++.++.. |.+|++..++|.+.-+-.-.+......+ +++...|+||-+.+.
T Consensus 22 l~Gk~v~V~GyG~iG~g~A~~~rg~--G~~V~v~e~dp~~al~A~~dG~~v~~~~-~a~~~adivvtaTGn 89 (163)
T d1li4a1 22 IAGKVAVVAGYGDVGKGCAQALRGF--GARVIITEIDPINALQAAMEGYEVTTMD-EACQEGNIFVTTTGC 89 (163)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEECCHH-HHTTTCSEEEECSSC
T ss_pred ecCCEEEEeccccccHHHHHHHHhC--CCeeEeeecccchhHHhhcCceEeeehh-hhhhhccEEEecCCC
Confidence 3458999999999999999999999 9999999998755322222344443322 567788888766664
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=96.75 E-value=0.0015 Score=50.40 Aligned_cols=64 Identities=19% Similarity=0.272 Sum_probs=42.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEe-cCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~-R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~ 153 (272)
.||.|+|+|++|+.+++.|.+. ++.+++++. |+++... ..+... ..+. +...++|+|+.|.++.
T Consensus 4 irvgiiG~G~ig~~~~~~l~~~-~~~elvav~~~~~~~~~---~~~~~~-~~~~~~~~~~~D~Vvi~tp~~ 69 (170)
T d1f06a1 4 IRVAIVGYGNLGRSVEKLIAKQ-PDMDLVGIFSRRATLDT---KTPVFD-VADVDKHADDVDVLFLCMGSA 69 (170)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-SSEEEEEEEESSSCCSS---SSCEEE-GGGGGGTTTTCSEEEECSCTT
T ss_pred ceEEEECChHHHHHHHHHHHhC-CCcEEEEEEeccccccc---cccccc-chhhhhhccccceEEEeCCCc
Confidence 4789999999999999988774 588888664 4433321 112221 1222 3567899999887764
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.73 E-value=0.0011 Score=51.29 Aligned_cols=66 Identities=15% Similarity=0.245 Sum_probs=52.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeecc--C--cc-----ccCCCCEEEEecCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK--W--TE-----ATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~--d--~~-----~~~~~D~Vi~~a~~ 152 (272)
.+|||.|+ |-+|...++..+.. |.+|+++++++++.+.+...|.+.+.. + .+ .-+++|+||.+.+.
T Consensus 25 ~~VLV~gaaGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~~~~~~~~~~gvd~vid~vgg 100 (167)
T d1tt7a2 25 GSVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG 100 (167)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT
T ss_pred CEEEEeCCcchHHHHHHHHHHHc--CCceEEEecCHHHHHHHHhhcccceEeccchhchhhhcccCCCceEEEecCcH
Confidence 46999996 99999999988888 999999999999998888877665431 1 11 23478999999864
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.73 E-value=0.0011 Score=52.14 Aligned_cols=70 Identities=16% Similarity=0.228 Sum_probs=41.8
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh-------hCCceeec-cCccccCCCCEEEEecCCC
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSL-KWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~-------~~~i~~~~-~d~~~~~~~D~Vi~~a~~~ 153 (272)
.+.||.|+|+ ||+|+.|++.|.+ ||..++..+......-..+. ........ .+.+...++|+||.+.+..
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~-HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp~~ 82 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLAN-HPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLPHG 82 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTT-CSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCSSS
T ss_pred CccEEEEECcccHHHHHHHHHHHh-CCCceEEEEeccccCCCccccccccccccccccchhhhhhhhcccceeeeccccc
Confidence 4458999997 9999999997765 67888887754322111111 00110111 1113456899998877653
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.69 E-value=0.001 Score=44.71 Aligned_cols=44 Identities=18% Similarity=0.409 Sum_probs=37.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG 129 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~ 129 (272)
..+|||.|+ |-+|...++.+... |++|+++++++++.+.+++.|
T Consensus 32 ~~~vlI~gasGgVG~~aiQlak~~--G~~Vi~~t~s~~k~~~~~~lG 76 (77)
T d1o8ca2 32 DGEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRESTHEYLKSLG 76 (77)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHHHT
T ss_pred CCcEEEEeCCCcHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHHCC
Confidence 357999986 99999999988888 999999999999987776544
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=96.69 E-value=0.00085 Score=52.48 Aligned_cols=68 Identities=16% Similarity=0.104 Sum_probs=41.8
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh------CCceeeccCcc-ccCCCCEEEEecCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWTE-ATQKFPYVIFCAPP 152 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~------~~i~~~~~d~~-~~~~~D~Vi~~a~~ 152 (272)
|+||.|+|+ |++|+.|++.|. +||..++..+..+...-..+.. ........+.+ ..+++|+|+.+.+.
T Consensus 1 MikVaIvGATGyvG~eLirlL~-~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~~~~~~dvvf~a~p~ 76 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLK-NHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPA 76 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHH-HCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCST
T ss_pred CeEEEEECCCcHHHHHHHHHHH-hCCCceEEEeeccccCCCcccccCchhhccccccccCHhHhccccceEEEcccc
Confidence 789999997 999999999665 5678898887644222111110 01111112222 33579999877765
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=96.68 E-value=0.0026 Score=49.74 Aligned_cols=64 Identities=17% Similarity=0.209 Sum_probs=48.6
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.+..- |.+|++.+|.+..... . ...+. +.+..+|+|+.+.+...
T Consensus 40 l~gk~vgIiG~G~IG~~va~~l~~~--g~~v~~~d~~~~~~~~------~-~~~~l~ell~~sDiv~~~~pl~~ 104 (181)
T d1qp8a1 40 IQGEKVAVLGLGEIGTRVGKILAAL--GAQVRGFSRTPKEGPW------R-FTNSLEEALREARAAVCALPLNK 104 (181)
T ss_dssp CTTCEEEEESCSTHHHHHHHHHHHT--TCEEEEECSSCCCSSS------C-CBSCSHHHHTTCSEEEECCCCST
T ss_pred ccCceEEEeccccccccceeeeecc--ccccccccccccccce------e-eeechhhhhhccchhhccccccc
Confidence 4557999999999999999999999 9999999987644211 1 11122 57889999988887643
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.66 E-value=0.0017 Score=50.60 Aligned_cols=32 Identities=31% Similarity=0.377 Sum_probs=26.7
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEe
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT 116 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~ 116 (272)
|+||.|+|+ ||+|..|++.|.+ ||..++..+.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~-HP~~ei~~l~ 33 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNR-HPHMTITALT 33 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHH-CTTEEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHh-CCCCceEeeE
Confidence 789999997 9999999996655 5788887664
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.66 E-value=0.0013 Score=50.76 Aligned_cols=65 Identities=17% Similarity=0.255 Sum_probs=50.6
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec--cCcc---------ccCCCCEEEEecC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWTE---------ATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~--~d~~---------~~~~~D~Vi~~a~ 151 (272)
.+|||+|+ |-+|...++.++.. |.+|+++++++++.+.+.+.|.+.+. .+.+ .-.++|+||.+.+
T Consensus 30 ~~VlV~Ga~G~vG~~aiq~a~~~--G~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~g 106 (174)
T d1yb5a2 30 ESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLA 106 (174)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred CEEEEEecccccccccccccccc--CcccccccccccccccccccCcccccccccccHHHHhhhhhccCCceEEeeccc
Confidence 58999996 99999999988888 99999999988877777777765443 2211 1346899999876
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=96.61 E-value=0.0022 Score=50.77 Aligned_cols=70 Identities=16% Similarity=0.116 Sum_probs=48.6
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|-||+.+++.|..- |.+|.+.++....... ...++.....-.+.+..+|+|+.+.+...
T Consensus 47 L~gktvgIiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~-~~~~~~~~~~l~~ll~~sD~i~~~~plt~ 116 (193)
T d1mx3a1 47 IRGETLGIIGLGRVGQAVALRAKAF--GFNVLFYDPYLSDGVE-RALGLQRVSTLQDLLFHSDCVTLHCGLNE 116 (193)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCTTHH-HHHTCEECSSHHHHHHHCSEEEECCCCCT
T ss_pred eeCceEEEeccccccccceeeeecc--ccceeeccCcccccch-hhhccccccchhhccccCCEEEEeecccc
Confidence 4557999999999999999999988 9999999987544321 12233322111145677888877776543
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=96.58 E-value=0.0021 Score=47.14 Aligned_cols=63 Identities=11% Similarity=0.075 Sum_probs=50.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---c-----ccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---~-----~~~~~D~Vi~~a~ 151 (272)
++|+|.|.|-+|+.+++.|. +++|.+++.+++....+...++..+.+|. + -+.+++.+|-+..
T Consensus 1 kHivI~G~g~~g~~l~~~L~----~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~ 71 (129)
T d2fy8a1 1 RHVVICGWSESTLECLRELR----GSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLE 71 (129)
T ss_dssp CCEEEESCCHHHHHHHHTSC----GGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHc----CCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEecc
Confidence 47899999999999999984 45678889988888888778888888875 1 3668899887654
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=96.58 E-value=0.0017 Score=47.31 Aligned_cols=34 Identities=32% Similarity=0.424 Sum_probs=31.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
++|+|+|+|++|..++..|.++ |.+|+.+.+.+.
T Consensus 31 ~~vvIIGgG~iG~E~A~~l~~~--g~~Vtli~~~~~ 64 (121)
T d1d7ya2 31 SRLLIVGGGVIGLELAATARTA--GVHVSLVETQPR 64 (121)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred CeEEEECcchhHHHHHHHhhcc--cceEEEEeeccc
Confidence 6899999999999999999999 999999998754
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.57 E-value=0.0011 Score=52.64 Aligned_cols=68 Identities=13% Similarity=0.158 Sum_probs=48.0
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|..- |.+|++.++....... ..+......+ +.++.+|+|+.+++...
T Consensus 41 l~gk~vgIiG~G~IG~~va~~l~~f--g~~V~~~d~~~~~~~~--~~~~~~~~l~-~~l~~sDii~~~~plt~ 108 (197)
T d1j4aa1 41 VRDQVVGVVGTGHIGQVFMQIMEGF--GAKVITYDIFRNPELE--KKGYYVDSLD-DLYKQADVISLHVPDVP 108 (197)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHHHH--HTTCBCSCHH-HHHHHCSEEEECSCCCG
T ss_pred ccCCeEEEecccccchhHHHhHhhh--cccccccCcccccccc--cceeeecccc-ccccccccccccCCccc
Confidence 3447999999999999999999888 9999999876543222 2222221111 46778899988877543
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.56 E-value=0.0047 Score=44.11 Aligned_cols=66 Identities=18% Similarity=0.060 Sum_probs=46.7
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhhhhh-CCceeeccC--ccccCCCCEEEEec
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELIN-MGITPSLKW--TEATQKFPYVIFCA 150 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~l~~-~~i~~~~~d--~~~~~~~D~Vi~~a 150 (272)
..++|+|+|.|.+|..-++.|++. |.+|++++..... ...+.. ..+++.... .+.+.+++.|+.+.
T Consensus 11 ~~k~vlVvG~G~va~~ka~~ll~~--ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at 80 (113)
T d1pjqa1 11 RDRDCLIVGGGDVAERKARLLLEA--GARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAAT 80 (113)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHT--TBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHhCCCcEEeecC
Confidence 457999999999999999999999 9999998875433 222222 234444322 24577888887554
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.51 E-value=0.0019 Score=46.54 Aligned_cols=34 Identities=15% Similarity=0.327 Sum_probs=31.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
++|+|+|+|++|..++..|.+. |.+|+.+.|.+.
T Consensus 23 ~~v~IiGgG~ig~E~A~~l~~~--G~~Vtlve~~~~ 56 (117)
T d1ebda2 23 KSLVVIGGGYIGIELGTAYANF--GTKVTILEGAGE 56 (117)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred CeEEEECCCccceeeeeeeccc--ccEEEEEEecce
Confidence 6899999999999999999999 999999998754
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.51 E-value=0.0018 Score=50.79 Aligned_cols=69 Identities=16% Similarity=0.189 Sum_probs=50.0
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
...+++.|+|.|.||+.+++.+..- |.+|++.++...+.... ..+++....+ +.++.+|+|+.+.+.+.
T Consensus 42 l~~k~vgiiG~G~IG~~va~~~~~f--g~~v~~~d~~~~~~~~~-~~~~~~~~l~-ell~~sDiv~~~~Plt~ 110 (184)
T d1ygya1 42 IFGKTVGVVGLGRIGQLVAQRIAAF--GAYVVAYDPYVSPARAA-QLGIELLSLD-DLLARADFISVHLPKTP 110 (184)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCHHHHH-HHTCEECCHH-HHHHHCSEEEECCCCST
T ss_pred ccceeeeeccccchhHHHHHHhhhc--cceEEeecCCCChhHHh-hcCceeccHH-HHHhhCCEEEEcCCCCc
Confidence 3457899999999999999999888 99999999876543322 2334332222 56778999987777544
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.48 E-value=0.0017 Score=50.36 Aligned_cols=67 Identities=19% Similarity=0.216 Sum_probs=50.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhCCceeec--cCc---c----c--cCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL--KWT---E----A--TQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~~i~~~~--~d~---~----~--~~~~D~Vi~~a~~ 152 (272)
.+|+|+|+|-+|...++.++.. |. +|+++++++.+.+..++.|.+... .+. + . -.++|+||.|++.
T Consensus 29 ~~VlI~GaG~vGl~~~q~ak~~--Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g~ 106 (174)
T d1jqba2 29 SSVVVIGIGAVGLMGIAGAKLR--GAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGG 106 (174)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--TCSCEEEECCCHHHHHHHHHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECSSC
T ss_pred CEEEEEcCCcchhhhhhhhhcc--cccccccccchhhhHHHHHhhCccccccccchhHHHHHHHHhhccCcceEEEccCC
Confidence 5899999999999988888888 86 799999998887776667754332 111 1 1 2469999999985
Q ss_pred C
Q 024143 153 S 153 (272)
Q Consensus 153 ~ 153 (272)
.
T Consensus 107 ~ 107 (174)
T d1jqba2 107 S 107 (174)
T ss_dssp T
T ss_pred H
Confidence 3
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=96.47 E-value=0.0024 Score=50.44 Aligned_cols=70 Identities=14% Similarity=0.085 Sum_probs=48.5
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc-cccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~-~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.+..- |.+|.+.++................ .+. +.+..+|+|+.+.+...
T Consensus 45 l~g~tvgIiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~~~~~~~~~~-~~l~~ll~~sD~v~l~~plt~ 115 (191)
T d1gdha1 45 LDNKTLGIYGFGSIGQALAKRAQGF--DMDIDYFDTHRASSSDEASYQATFH-DSLDSLLSVSQFFSLNAPSTP 115 (191)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHHHHHTCEEC-SSHHHHHHHCSEEEECCCCCT
T ss_pred ecccceEEeecccchHHHHHHHHhh--ccccccccccccccchhhccccccc-CCHHHHHhhCCeEEecCCCCc
Confidence 3457999999999999999999888 9999999886554332222121111 111 46778899877776543
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.43 E-value=0.0026 Score=49.06 Aligned_cols=68 Identities=16% Similarity=0.132 Sum_probs=53.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC---CceeeccCc----cccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT----EATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~---~i~~~~~d~----~~~~~~D~Vi~~a~~ 152 (272)
+.-||+|+|+|..|..-++....- |.+|++++.++++++.++.. .++....+. +.++++|+||-++-.
T Consensus 31 ~pa~V~ViGaGvaG~~A~~~A~~l--GA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aali 105 (168)
T d1pjca1 31 KPGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLV 105 (168)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCcEEEEECCChHHHHHHHHHhhC--CCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeec
Confidence 346999999999999999999999 99999999998887766543 234333332 357799999999864
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.43 E-value=0.0029 Score=49.22 Aligned_cols=89 Identities=18% Similarity=0.210 Sum_probs=61.3
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeecc--C--cc-----ccCCCCEEEEecCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK--W--TE-----ATQKFPYVIFCAPPSR 154 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~--d--~~-----~~~~~D~Vi~~a~~~~ 154 (272)
.+|||.|+ |-+|...++..... |.+|+++++++++.+.+...|.+.+.. + .+ .-+++|+||.+.+...
T Consensus 33 ~~VLI~gaaGGVG~~aiQlak~~--Ga~Viat~~s~~k~~~~~~lGa~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg~~ 110 (176)
T d1xa0a2 33 GPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRT 110 (176)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTTT
T ss_pred CEEEEEeccchHHHHHHHHHHHc--CCceEEecCchHHHHHHHhcccceeeecchhHHHHHHHhhccCcCEEEEcCCchh
Confidence 57999996 99999999988888 999999999999988887777654431 1 11 1347999999987432
Q ss_pred CCChHHHHHHHHHHhcCCCeEEEEecce
Q 024143 155 SLDYPGDVRLAALSWNGEGSFLFTSSSA 182 (272)
Q Consensus 155 ~~~~~~~~~~l~~~~~gvkr~V~~SS~~ 182 (272)
+...+.+...-.|++.++...
T Consensus 111 -------~~~~l~~l~~~Griv~~G~~~ 131 (176)
T d1xa0a2 111 -------LATVLSRMRYGGAVAVSGLTG 131 (176)
T ss_dssp -------HHHHHHTEEEEEEEEECSCCS
T ss_pred -------HHHHHHHhCCCceEEEeeccc
Confidence 222222222335777666543
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=96.43 E-value=0.002 Score=46.52 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=31.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
++|+|+|+|++|..++..|.+. |++|+.+.|.+.
T Consensus 22 ~~vvIiGgG~ig~E~A~~l~~~--G~~Vtlve~~~~ 55 (116)
T d1gesa2 22 ERVAVVGAGYIGVELGGVINGL--GAKTHLFEMFDA 55 (116)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CEEEEECCChhhHHHHHHhhcc--ccEEEEEeecch
Confidence 6899999999999999999999 999999998754
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=96.40 E-value=0.003 Score=42.41 Aligned_cols=37 Identities=19% Similarity=0.399 Sum_probs=33.1
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcch
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~ 122 (272)
||+|.|+|+|.+|+-++.+-..- |++|.+++-+++..
T Consensus 1 ~k~vgIlG~GQLgrMl~~Aa~~L--G~~v~vldp~~~~p 37 (78)
T d3etja2 1 MKQVCVLGNGQLGRMLRQAGEPL--GIAVWPVGLDAEPA 37 (78)
T ss_dssp CEEEEEEBCSHHHHHHHHHHGGG--TEEEEEECTTSCGG
T ss_pred CCEEEEEcCCHHHHHHHHHHHHc--CCEEEEEcCCCCCc
Confidence 67999999999999999999999 99999999765543
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.40 E-value=0.0022 Score=49.64 Aligned_cols=89 Identities=13% Similarity=0.155 Sum_probs=61.7
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec--cCcc-------c--cCCCCEEEEecCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWTE-------A--TQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~--~d~~-------~--~~~~D~Vi~~a~~ 152 (272)
.+|||+|+ |-+|...++.++.. |.+|+++++++++.+.+.+.|.+... .+.+ . -.++|+||.+.+.
T Consensus 27 ~~VlI~ga~g~vG~~~iqla~~~--g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~g~ 104 (183)
T d1pqwa_ 27 ERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAG 104 (183)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCT
T ss_pred CEEEEECCCCCcccccchhhccc--cccceeeecccccccccccccccccccCCccCHHHHHHHHhCCCCEEEEEecccc
Confidence 58999985 99999999999889 99999999998888877777765443 2221 1 2579999999873
Q ss_pred CCCCChHHHHHHHHHHhcCCCeEEEEecce
Q 024143 153 SRSLDYPGDVRLAALSWNGEGSFLFTSSSA 182 (272)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~gvkr~V~~SS~~ 182 (272)
. .+...+.+...-.++|.++...
T Consensus 105 ~-------~~~~~~~~l~~~G~~v~~G~~~ 127 (183)
T d1pqwa_ 105 E-------AIQRGVQILAPGGRFIELGKKD 127 (183)
T ss_dssp H-------HHHHHHHTEEEEEEEEECSCGG
T ss_pred h-------HHHHHHHHhcCCCEEEEEccCC
Confidence 1 2333332222235777765443
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=96.39 E-value=0.0028 Score=48.53 Aligned_cols=69 Identities=17% Similarity=0.208 Sum_probs=51.5
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
+.-|+++|.|.|++|+-++++|... |.+|+++..+|-+.-+-.-.|.+....+ ++++..|++|-+-+-.
T Consensus 21 laGk~vvV~GYG~vGrG~A~~~rg~--Ga~V~V~E~DPi~alqA~mdGf~v~~~~-~a~~~aDi~vTaTGn~ 89 (163)
T d1v8ba1 21 ISGKIVVICGYGDVGKGCASSMKGL--GARVYITEIDPICAIQAVMEGFNVVTLD-EIVDKGDFFITCTGNV 89 (163)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTTCEECCHH-HHTTTCSEEEECCSSS
T ss_pred ecCCEEEEecccccchhHHHHHHhC--CCEEEEEecCchhhHHHHhcCCccCchh-HccccCcEEEEcCCCC
Confidence 4458999999999999999999999 9999999988754322222455554333 5788889887776643
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.36 E-value=0.0024 Score=46.57 Aligned_cols=34 Identities=18% Similarity=0.394 Sum_probs=31.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
++++|+|+|++|..++..|.+. |.+|+.+.|.+.
T Consensus 24 ~~~vIiG~G~ig~E~A~~l~~l--G~~Vtii~~~~~ 57 (122)
T d1v59a2 24 KRLTIIGGGIIGLEMGSVYSRL--GSKVTVVEFQPQ 57 (122)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CeEEEECCCchHHHHHHHHHhh--CcceeEEEeccc
Confidence 6899999999999999999999 999999988654
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=96.36 E-value=0.0022 Score=46.37 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=31.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
++|+|+|+|++|-.++..|.+. |.+|+.+.|.+.
T Consensus 23 ~~v~IiGgG~iG~E~A~~l~~~--g~~Vtlv~~~~~ 56 (117)
T d1onfa2 23 KKIGIVGSGYIAVELINVIKRL--GIDSYIFARGNR 56 (117)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSSS
T ss_pred CEEEEECCchHHHHHHHHHHhc--cccceeeehhcc
Confidence 6899999999999999999999 999999998643
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=96.36 E-value=0.0021 Score=51.08 Aligned_cols=67 Identities=10% Similarity=0.165 Sum_probs=47.8
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.|..- |.+|++.++.+.+... ........+ +.++.+|+|+.+.+...
T Consensus 43 l~~ktvgIiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~---~~~~~~~l~-~l~~~~D~v~~~~plt~ 109 (199)
T d1dxya1 43 LGQQTVGVMGTGHIGQVAIKLFKGF--GAKVIAYDPYPMKGDH---PDFDYVSLE-DLFKQSDVIDLHVPGIE 109 (199)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSSCC---TTCEECCHH-HHHHHCSEEEECCCCCG
T ss_pred ccceeeeeeeccccccccccccccc--ceeeeccCCccchhhh---cchhHHHHH-HHHHhcccceeeecccc
Confidence 4457999999999999999999988 9999999986544221 122222111 45678899887776543
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.33 E-value=0.0036 Score=47.52 Aligned_cols=68 Identities=10% Similarity=0.061 Sum_probs=40.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCC----e-E--EEEe--cCCcchhhh----hhC---Cceee---ccCccccCCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC----Q-I--YGQT--MTADHHDEL----INM---GITPS---LKWTEATQKFP 144 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~----~-V--~~~~--R~~~~~~~l----~~~---~i~~~---~~d~~~~~~~D 144 (272)
+||.|+|| |++|++++..|... +. + + ..+. +..++...+ ... ..... ..+.++++++|
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~--~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 82 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAG--EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDAD 82 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhc--cccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhccccc
Confidence 59999997 99999999999876 42 1 1 1111 112222111 111 11111 12235789999
Q ss_pred EEEEecCCCC
Q 024143 145 YVIFCAPPSR 154 (272)
Q Consensus 145 ~Vi~~a~~~~ 154 (272)
+||.+++...
T Consensus 83 vViitaG~~~ 92 (154)
T d1y7ta1 83 YALLVGAAPR 92 (154)
T ss_dssp EEEECCCCCC
T ss_pred EEEeecCcCC
Confidence 9999998654
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=96.31 E-value=0.011 Score=45.85 Aligned_cols=69 Identities=20% Similarity=0.219 Sum_probs=48.7
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchh-----------------------hhhhCCceeeccC---
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----------------------ELINMGITPSLKW--- 136 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~-----------------------~l~~~~i~~~~~d--- 136 (272)
..++|+|+|+|.-|-..+..|.++ ||+|+.+.+.+.--. .++..+++.....
T Consensus 42 ~~k~V~IIGaGPAGL~AA~~la~~--G~~Vtl~E~~~~~GG~l~~~~~~p~~~~~~~~~~~~~~~~~~~gV~i~l~~~Vt 119 (179)
T d1ps9a3 42 QKKNLAVVGAGPAGLAFAINAAAR--GHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVT 119 (179)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCC
T ss_pred CCcEEEEECccHHHHHHHHHHHhh--ccceEEEeccCccCceEEEEEeCcccchHHHHHHHHHHhhhcCCeEEEeCCEEc
Confidence 457999999999999999999999 999999998643100 0112345543321
Q ss_pred ccccCCCCEEEEecCCC
Q 024143 137 TEATQKFPYVIFCAPPS 153 (272)
Q Consensus 137 ~~~~~~~D~Vi~~a~~~ 153 (272)
.+...+.|.||.+.+..
T Consensus 120 ~~~~~~~d~vilAtG~~ 136 (179)
T d1ps9a3 120 ADQLQAFDETILASGIP 136 (179)
T ss_dssp SSSSCCSSEEEECCCEE
T ss_pred ccccccceeEEEeecCC
Confidence 13456889998887753
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.28 E-value=0.0045 Score=44.42 Aligned_cols=39 Identities=23% Similarity=0.404 Sum_probs=34.6
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchh
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD 123 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~ 123 (272)
...||.|+|+|.||+-++....+. |++|++++.+++...
T Consensus 10 ~~~kigIlGgGQL~rMla~aA~~l--G~~v~v~d~~~~~PA 48 (111)
T d1kjqa2 10 AATRVMLLGSGELGKEVAIECQRL--GVEVIAVDRYADAPA 48 (111)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTT--TCEEEEEESSTTCGG
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHC--CCEEEEEcCCCCCch
Confidence 446899999999999999999999 999999999876543
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.28 E-value=0.0033 Score=45.76 Aligned_cols=35 Identities=20% Similarity=0.410 Sum_probs=31.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
.++|+|+|+|++|..++..|.+. |.+|+.+.+.+.
T Consensus 30 ~k~vvViGgG~iG~E~A~~l~~~--g~~Vtlie~~~~ 64 (123)
T d1nhpa2 30 VNNVVVIGSGYIGIEAAEAFAKA--GKKVTVIDILDR 64 (123)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred CCEEEEECChHHHHHHHHHhhcc--ceEEEEEEecCc
Confidence 36899999999999999999999 999999988643
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=96.26 E-value=0.0026 Score=49.06 Aligned_cols=66 Identities=15% Similarity=0.201 Sum_probs=51.7
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeec--cCcc-------c--cCCCCEEEEecCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWTE-------A--TQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~--~d~~-------~--~~~~D~Vi~~a~~ 152 (272)
.+|+|+|+ |-+|..+++.++.. |.+|+++++++++.+.+...|.+.+. .+.+ . -.++|+|+.+++.
T Consensus 30 ~~Vlv~ga~g~vG~~~iqlak~~--Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g~ 107 (179)
T d1qora2 30 EQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGR 107 (179)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCG
T ss_pred CEEEEEccccccchHHHHHHHHh--CCeEeecccchHHHHHHHhcCCeEEEECCCCCHHHHHHHHhCCCCeEEEEeCccH
Confidence 58999986 99999999988888 99999999999988887777765443 2221 1 2468999998874
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=96.26 E-value=0.0031 Score=44.75 Aligned_cols=35 Identities=11% Similarity=0.066 Sum_probs=28.3
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
+..++|+|+|+|.-|..++..|.+. .-+|+...|.
T Consensus 30 f~gK~VlVVG~g~Sa~dia~~l~~~--ak~v~~~~~r 64 (107)
T d2gv8a2 30 FVGESVLVVGGASSANDLVRHLTPV--AKHPIYQSLL 64 (107)
T ss_dssp GTTCCEEEECSSHHHHHHHHHHTTT--SCSSEEEECT
T ss_pred cCCCeEEEECCCCCHHHHHHHHHHh--cCEEEEEEec
Confidence 5568999999999999999999877 6565555554
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.25 E-value=0.0043 Score=48.36 Aligned_cols=33 Identities=21% Similarity=0.416 Sum_probs=28.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEec
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R 117 (272)
|-||.|.|.|.||+.++|.|.++ ++.+|+++..
T Consensus 1 MIKVaINGfGRIGR~v~Ral~~~-~dievVaInd 33 (178)
T d1b7go1 1 MVNVAVNGYGTIGKRVADAIIKQ-PDMKLVGVAK 33 (178)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-TTEEEEEEEC
T ss_pred CeEEEEECCCHHHHHHHHHHHhC-CCCEEEEEEC
Confidence 56899999999999999999887 4789998754
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=96.22 E-value=0.0035 Score=45.34 Aligned_cols=34 Identities=21% Similarity=0.444 Sum_probs=31.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
++++|+|+|+||-.++..|.+. |.+|+.+.|...
T Consensus 23 ~~i~IiG~G~ig~E~A~~l~~~--G~~Vtiv~~~~~ 56 (119)
T d3lada2 23 GKLGVIGAGVIGLELGSVWARL--GAEVTVLEAMDK 56 (119)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred CeEEEECCChHHHHHHHHHHHc--CCceEEEEeecc
Confidence 6899999999999999999999 999999998653
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.21 E-value=0.003 Score=45.96 Aligned_cols=32 Identities=16% Similarity=0.110 Sum_probs=30.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
++++|+|+|+||..++..|.+. |.+|+.+.|+
T Consensus 21 ~~vvIIGgG~iG~E~A~~l~~l--G~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVGASYVALECAGFLAGI--GLDVTVMVRS 52 (122)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred CeEEEECCCccHHHHHHHHhhc--CCeEEEEEec
Confidence 5899999999999999999999 9999999886
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.21 E-value=0.0031 Score=45.27 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=31.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
++++|+|+|++|-.++..|.+. |++|+.+.|.+.
T Consensus 22 ~~vvIiGgG~~G~E~A~~l~~~--g~~Vtlve~~~~ 55 (115)
T d1lvla2 22 QHLVVVGGGYIGLELGIAYRKL--GAQVSVVEARER 55 (115)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHhhc--ccceEEEeeecc
Confidence 6899999999999999999999 999999988654
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.15 E-value=0.0031 Score=45.80 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=31.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
++++|+|+|++|-.++..|.+. |++|+.+.|.+.
T Consensus 33 ~~vvIiGgG~iG~E~A~~l~~~--g~~Vtlv~~~~~ 66 (122)
T d1xhca2 33 GEAIIIGGGFIGLELAGNLAEA--GYHVKLIHRGAM 66 (122)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT--TCEEEEECSSSC
T ss_pred CcEEEECCcHHHHHHHHHhhcc--cceEEEEecccc
Confidence 6899999999999999999999 999999998754
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.15 E-value=0.0085 Score=46.24 Aligned_cols=87 Identities=17% Similarity=0.219 Sum_probs=60.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhCCceeecc----Ccc--------ccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLK----WTE--------ATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~~i~~~~~----d~~--------~~~~~D~Vi~~a~ 151 (272)
.+|+|+|+|-||...+..+... |. +|++.++++++.+..++.|...... |.. .-.++|+||.|.+
T Consensus 30 ~~VlV~G~G~iGl~a~~~ak~~--Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G 107 (174)
T d1e3ia2 30 STCAVFGLGCVGLSAIIGCKIA--GASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 107 (174)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CEEEEECCChHHHHHHHHHHHh--CCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEecc
Confidence 5899999999999999988888 87 6888898888877666677654431 211 2358999999998
Q ss_pred CCCCCChHHHHHHHHHHh-cCCCeEEEEe
Q 024143 152 PSRSLDYPGDVRLAALSW-NGEGSFLFTS 179 (272)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~-~gvkr~V~~S 179 (272)
.. ..+...+... .+-.+++.++
T Consensus 108 ~~------~~~~~a~~~~~~g~G~~v~vG 130 (174)
T d1e3ia2 108 TA------QTLKAAVDCTVLGWGSCTVVG 130 (174)
T ss_dssp CH------HHHHHHHHTBCTTTCEEEECC
T ss_pred cc------hHHHHHHHHhhcCCeEEEecC
Confidence 52 2344443322 2235787766
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.13 E-value=0.0083 Score=46.34 Aligned_cols=88 Identities=15% Similarity=0.200 Sum_probs=61.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhCCceeecc----Cc--c------ccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLK----WT--E------ATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~~i~~~~~----d~--~------~~~~~D~Vi~~a~ 151 (272)
.+|+|+|+|-+|...++.+... |. +|+++++++++.+.-++.|.+.... +. + .-.++|+||.+.+
T Consensus 31 ~tVlI~G~GgvGl~ai~~ak~~--G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g 108 (176)
T d1d1ta2 31 STCVVFGLGGVGLSVIMGCKSA--GASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIG 108 (176)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECSC
T ss_pred CEEEEECCCchhHHHHHHHHHc--CCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEeCC
Confidence 5799999999999999999888 84 8999999999987766667654431 11 1 2358999999988
Q ss_pred CCCCCChHHHHHHHHH-HhcCCCeEEEEec
Q 024143 152 PSRSLDYPGDVRLAAL-SWNGEGSFLFTSS 180 (272)
Q Consensus 152 ~~~~~~~~~~~~~l~~-~~~gvkr~V~~SS 180 (272)
... .....+. ...+-.++|+++.
T Consensus 109 ~~~------~~~~a~~~~~~~~G~~v~vG~ 132 (176)
T d1d1ta2 109 HLE------TMIDALASCHMNYGTSVVVGV 132 (176)
T ss_dssp CHH------HHHHHHTTSCTTTCEEEECSC
T ss_pred chH------HHHHHHHHhhcCCeEEEEEEc
Confidence 532 2333332 2233467887763
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.10 E-value=0.0039 Score=45.48 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=31.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
++++|+|+|++|-.++..|.+. |.+|+.+.|.+.
T Consensus 23 k~vvIvGgG~iG~E~A~~l~~~--G~~Vtlv~~~~~ 56 (125)
T d3grsa2 23 GRSVIVGAGYIAVEMAGILSAL--GSKTSLMIRHDK 56 (125)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CEEEEEcCCccHHHHHHHHhcC--CcEEEEEeeccc
Confidence 6899999999999999999999 999999999753
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=96.04 E-value=0.013 Score=45.69 Aligned_cols=46 Identities=17% Similarity=0.317 Sum_probs=40.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCce
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT 131 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~ 131 (272)
.-+|+|+|+|..|.+-++-.+.- |.+|++++.++++.+.++..+-.
T Consensus 29 pa~VvViGaGvaG~~Aa~~A~~l--GA~V~v~D~~~~~~~~l~~l~~~ 74 (183)
T d1l7da1 29 PARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVESLGGK 74 (183)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHHTTCE
T ss_pred CcEEEEEcCcHHHHHHHHHHHHc--CCEEEEEeccHHHHHHHHHhhcc
Confidence 35899999999999999999999 99999999999988888766543
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=96.04 E-value=0.0041 Score=45.94 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=31.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
++|+|+|+|++|-.++..|.+. |.+|+.+.+.+.
T Consensus 36 k~v~VIGgG~iG~E~A~~l~~~--g~~Vtvie~~~~ 69 (133)
T d1q1ra2 36 NRLVVIGGGYIGLEVAATAIKA--NMHVTLLDTAAR 69 (133)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CEEEEECCchHHHHHHHHHHhh--Ccceeeeeeccc
Confidence 6899999999999999999999 999999998654
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=96.02 E-value=0.004 Score=49.77 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=30.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
+||+|+|+|..|...+..|.++ |++|+++.|..
T Consensus 7 ~kVvVIGaGiaGl~~A~~L~~~--G~~V~vier~~ 39 (268)
T d1c0pa1 7 KRVVVLGSGVIGLSSALILARK--GYSVHILARDL 39 (268)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CcEEEECccHHHHHHHHHHHHC--CCCEEEEeCCC
Confidence 6899999999999999999999 99999999853
|
| >d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Hypothetical protein Atu2571 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.01 E-value=0.00014 Score=49.82 Aligned_cols=43 Identities=12% Similarity=0.093 Sum_probs=33.0
Q ss_pred ccccccCCcchhhhcc-cccccccc--ccccceecc--cccccccccc
Q 024143 17 TRFFAADSLSSKASSV-FFNNRTWK--LKLRPLVAS--SSSSSMATNF 59 (272)
Q Consensus 17 ~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~--~~~~~~~~~~ 59 (272)
++|||+|++|+++-++ ..++++|+ +|...+|.. ++...++..+
T Consensus 26 ~~f~dlG~DSl~~~~l~~~le~~f~v~i~~~~l~~~~~~Ti~~la~~i 73 (83)
T d2jq4a1 26 ADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTV 73 (83)
T ss_dssp SCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHH
T ss_pred CCHHHHhCccHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhHHHHHHHH
Confidence 8999999999999999 99999995 555667754 4555554443
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.96 E-value=0.0053 Score=46.64 Aligned_cols=46 Identities=17% Similarity=0.218 Sum_probs=39.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCcee
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP 132 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~ 132 (272)
.+|+|.|+|.+|...++.++.. |.+|+++++++++.+..++.|.+.
T Consensus 29 ~~VlV~GaG~vG~~~~~~ak~~--G~~Vi~~~~~~~~~~~a~~~Ga~~ 74 (166)
T d1llua2 29 QWVAISGIGGLGHVAVQYARAM--GLHVAAIDIDDAKLELARKLGASL 74 (166)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSE
T ss_pred CEEEEeeccccHHHHHHHHHHc--CCccceecchhhHHHhhhccCccc
Confidence 5899999999999988888888 999999999988887766666543
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=95.95 E-value=0.0063 Score=47.23 Aligned_cols=65 Identities=17% Similarity=0.231 Sum_probs=50.0
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeecc--Cc---ccc--CCCCEEEEecC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK--WT---EAT--QKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~--d~---~~~--~~~D~Vi~~a~ 151 (272)
.+|||+|+ |-+|...++..... |.+|++++|++++.+.+...|.+.+.. +. +.+ ...|.||.+++
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~--Ga~Via~~~~~~k~~~~~~lGad~vi~~~~~~~~~~l~~~~~~~vvD~Vg 105 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVG 105 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTEEEEEEGGGSSSCCSSCCCCEEEEEESSC
T ss_pred CcEEEEEccccchHHHHHHHHHc--CCCeEEEecchhHHHHHHhhccccccccccHHHHHHHHhhcCCeeEEEcc
Confidence 47999986 99999999988888 999999999999988887777765432 11 112 24688888775
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=95.95 E-value=0.013 Score=44.93 Aligned_cols=67 Identities=15% Similarity=0.193 Sum_probs=50.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhhCCceeecc--Cc-c---------ccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSLK--WT-E---------ATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~~~i~~~~~--d~-~---------~~~~~D~Vi~~a~ 151 (272)
.+|+|.|+|-+|...+..+... | .+|+++++++++.+.....+...... +. + ...++|+||.+.+
T Consensus 30 dtVlV~GaGG~G~~~~~~~~~~--g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G 107 (176)
T d2jhfa2 30 STCAVFGLGGVGLSVIMGCKAA--GAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 107 (176)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEECCCCcHHHHHHHHHHc--CCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecCC
Confidence 5799999988999888888887 6 59999999999888777777654331 11 1 1348999999988
Q ss_pred CC
Q 024143 152 PS 153 (272)
Q Consensus 152 ~~ 153 (272)
..
T Consensus 108 ~~ 109 (176)
T d2jhfa2 108 RL 109 (176)
T ss_dssp CH
T ss_pred ch
Confidence 53
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.93 E-value=0.0053 Score=46.58 Aligned_cols=65 Identities=12% Similarity=0.139 Sum_probs=49.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC--cc-------ccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW--TE-------ATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d--~~-------~~~~~D~Vi~~a~ 151 (272)
.+|+|.|+|-+|...++.+... |.+|+++++++++.+..+..|.+..... .+ ...+.|.+|.+++
T Consensus 29 ~~vlv~G~G~iG~~a~~~a~~~--g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 102 (168)
T d1rjwa2 29 EWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAV 102 (168)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CEEEEeecccchhhhhHHHhcC--CCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCCCceEEeecC
Confidence 5899999999999888888888 9999999999998888777777655421 11 2346667776654
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=95.93 E-value=0.0033 Score=45.76 Aligned_cols=35 Identities=17% Similarity=0.491 Sum_probs=32.2
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~ 121 (272)
++++|+|+|++|-.++..|.+. |.+|+.+.|++..
T Consensus 26 ~~~viiG~G~iglE~A~~~~~~--G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 26 KKLVVIGAGYIGLEMGSVWGRI--GSEVTVVEFASEI 60 (123)
T ss_dssp SEEEESCCSHHHHHHHHHHHHH--TCEEEEECSSSSS
T ss_pred CeEEEEccchHHHHHHHHHHhc--CCeEEEEEEcccc
Confidence 6899999999999999999999 9999999987654
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.91 E-value=0.0038 Score=47.24 Aligned_cols=62 Identities=15% Similarity=0.134 Sum_probs=43.5
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-CceeeccCccccCCCCEEEEecCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
||-++|.|.+|+.+++.|++. |+.| ...|..++...+... +... ...+.+.++|++|.+...
T Consensus 2 kIg~IGlG~MG~~ma~~L~~~--g~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~ 64 (156)
T d2cvza2 2 KVAFIGLGAMGYPMAGHLARR--FPTL-VWNRTFEKALRHQEEFGSEA--VPLERVAEARVIFTCLPT 64 (156)
T ss_dssp CEEEECCSTTHHHHHHHHHTT--SCEE-EECSSTHHHHHHHHHHCCEE--CCGGGGGGCSEEEECCSS
T ss_pred eEEEEeHHHHHHHHHHHHHhC--CCEE-EEeCCHHHHHHHHHHcCCcc--cccccccceeEEEecccc
Confidence 799999999999999999998 8866 467766655444332 2221 122456678888877664
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=95.89 E-value=0.013 Score=44.96 Aligned_cols=87 Identities=22% Similarity=0.276 Sum_probs=60.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhCCceeec----cCc---c-----ccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL----KWT---E-----ATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~~i~~~~----~d~---~-----~~~~~D~Vi~~a~ 151 (272)
.+|+|.|+|-+|...++.+... |. +|+++++++++.+..++.|.+... .|. + .-.++|+||.+.+
T Consensus 29 ~~VlV~GaGgvGl~a~~~ak~~--G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~g 106 (174)
T d1p0fa2 29 STCAVFGLGGVGFSAIVGCKAA--GASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 106 (174)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEECCCchhHHHHHHHHHc--CCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcCC
Confidence 5899999999999999999888 86 788999999888877777766543 121 1 1247999999987
Q ss_pred CCCCCChHHHHHHHHHH-hcCCCeEEEEe
Q 024143 152 PSRSLDYPGDVRLAALS-WNGEGSFLFTS 179 (272)
Q Consensus 152 ~~~~~~~~~~~~~l~~~-~~gvkr~V~~S 179 (272)
.. ......+.. ..+-.+++.+.
T Consensus 107 ~~------~~~~~~~~~~~~~~G~~v~vG 129 (174)
T d1p0fa2 107 RI------ETMMNALQSTYCGSGVTVVLG 129 (174)
T ss_dssp CH------HHHHHHHHTBCTTTCEEEECC
T ss_pred Cc------hHHHHHHHHHHHhcCceEEEE
Confidence 52 233333322 23345677666
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.88 E-value=0.011 Score=45.04 Aligned_cols=66 Identities=18% Similarity=0.259 Sum_probs=48.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhCCceeecc--C--cc--------ccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLK--W--TE--------ATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~~i~~~~~--d--~~--------~~~~~D~Vi~~a~ 151 (272)
.+|+|.|+|-+|...++.+... |. .|++.++++++.+..++.|.+.... + .+ .-.++|+||.+.+
T Consensus 30 ~tVlI~GaGGvG~~aiq~ak~~--G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~~G 107 (176)
T d2fzwa2 30 SVCAVFGLGGVGLAVIMGCKVA--GASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 107 (176)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEecchhHHHHHHHHHHHH--hcCceEEEcccHHHHHHHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeecCC
Confidence 5899999988999999988888 85 6777778888877666667554431 1 11 1257999999987
Q ss_pred C
Q 024143 152 P 152 (272)
Q Consensus 152 ~ 152 (272)
.
T Consensus 108 ~ 108 (176)
T d2fzwa2 108 N 108 (176)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=95.85 E-value=0.0052 Score=46.39 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=30.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
+||+|+|+|+.|-.++..|.+..+..+|+.+.+.+
T Consensus 3 krivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 79999999999999999999984346888887765
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.84 E-value=0.0074 Score=47.23 Aligned_cols=67 Identities=15% Similarity=0.112 Sum_probs=46.8
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
...++|.|+|.|.||+.+++.+..- |.+|++.++....... .......-.+.++.+|+|+.+++...
T Consensus 42 l~~~~vgiiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~----~~~~~~~l~ell~~sDii~i~~plt~ 108 (188)
T d1sc6a1 42 ARGKKLGIIGYGHIGTQLGILAESL--GMYVYFYDIENKLPLG----NATQVQHLSDLLNMSDVVSLHVPENP 108 (188)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCCCCT----TCEECSCHHHHHHHCSEEEECCCSST
T ss_pred ccceEEEEeecccchhhhhhhcccc--cceEeeccccccchhh----hhhhhhhHHHHHhhccceeecccCCc
Confidence 4457999999999999999999888 9999999986443211 11111110146678899887777544
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.80 E-value=0.01 Score=46.62 Aligned_cols=66 Identities=12% Similarity=0.083 Sum_probs=50.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhCCceeeccC--cc---------ccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLKW--TE---------ATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~~i~~~~~d--~~---------~~~~~D~Vi~~a~~ 152 (272)
.+|+|.|+|.+|...+..+... |. +|+++++++++.+...+.|.+..... .+ .-.++|++|.+.+.
T Consensus 27 ~tVlV~GaG~vGl~a~~~ak~~--ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~i~~~t~g~g~D~vid~vG~ 104 (195)
T d1kola2 27 STVYVAGAGPVGLAAAASARLL--GAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGF 104 (195)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCCT
T ss_pred CEEEEECcCHHHHHHHHHHHhh--cccceeeecccchhhHhhhhccccEEEeCCCcCHHHHHHHHhCCCCcEEEEECccc
Confidence 5899999999998777777666 55 88899999888877777777665421 11 13478999999884
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=95.79 E-value=0.0061 Score=44.52 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=31.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
++++|+|+|+||-.++..|.+. |.+|+.+.+.+.
T Consensus 27 ~~vvIiGgG~IG~E~A~~~~~~--G~~Vtive~~~~ 60 (125)
T d1ojta2 27 GKLLIIGGGIIGLEMGTVYSTL--GSRLDVVEMMDG 60 (125)
T ss_dssp SEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHhhcC--CCEEEEEEeecc
Confidence 6899999999999999999999 999999988654
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.75 E-value=0.014 Score=44.04 Aligned_cols=70 Identities=14% Similarity=0.128 Sum_probs=41.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCC-C----CeEEEEecCCcc--hhhhh----hCC---cee-ec--cCccccCCCCEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHP-G----CQIYGQTMTADH--HDELI----NMG---ITP-SL--KWTEATQKFPYV 146 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~-g----~~V~~~~R~~~~--~~~l~----~~~---i~~-~~--~d~~~~~~~D~V 146 (272)
+||.|+|| |.+|++++-.|..... + .+++.++.++.+ .+.+. ... ... .. .+.++++++|+|
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvV 83 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVA 83 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSEE
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCceEE
Confidence 59999996 9999999998876510 1 134444443322 22211 111 111 11 122578999999
Q ss_pred EEecCCCC
Q 024143 147 IFCAPPSR 154 (272)
Q Consensus 147 i~~a~~~~ 154 (272)
|.+++...
T Consensus 84 Vitag~~~ 91 (154)
T d5mdha1 84 ILVGSMPR 91 (154)
T ss_dssp EECCSCCC
T ss_pred EEecccCC
Confidence 99998643
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.74 E-value=0.0062 Score=47.46 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=30.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
|||+|+|+|++|-.++..|.+..++.+|+.+.|.+
T Consensus 1 ~KVvIIGgG~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 68999999999999999999886677899888753
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.70 E-value=0.011 Score=45.29 Aligned_cols=66 Identities=11% Similarity=0.113 Sum_probs=48.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhhCCceeec-cCcc---------ccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL-KWTE---------ATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~~~i~~~~-~d~~---------~~~~~D~Vi~~a~~ 152 (272)
.+|+|.|+|.+|...++.+... |. .|++.++++++.+..++.+.+.+. .+.+ .-.++|+||.+++.
T Consensus 34 ~~vli~GaG~vG~~~~~~a~~~--g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~ 110 (172)
T d1h2ba2 34 AYVAIVGVGGLGHIAVQLLKVM--TPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGS 110 (172)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred CEEEEeCCChHHHHHHHHHHhh--cCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCc
Confidence 5799999999999988888877 64 777888888887777766654332 1111 13478999999885
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=95.65 E-value=0.0066 Score=48.87 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=31.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
+||+|+|+|.-|..++..|.++ |++|+++.|++.
T Consensus 5 ~kV~IiGaG~aGl~~A~~L~~~--G~~v~v~Er~~~ 38 (265)
T d2voua1 5 DRIAVVGGSISGLTAALMLRDA--GVDVDVYERSPQ 38 (265)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 6999999999999999999999 999999998654
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=95.64 E-value=0.0055 Score=49.91 Aligned_cols=32 Identities=16% Similarity=0.248 Sum_probs=29.8
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
.|+|+|+|..|..++.+|.++ |++|+++.+..
T Consensus 6 DvvIIGaGi~Gls~A~~La~~--G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGGGIIGSAIAYYLAKE--NKNTALFESGT 37 (276)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 399999999999999999999 99999999864
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=95.63 E-value=0.0078 Score=45.69 Aligned_cols=67 Identities=10% Similarity=0.037 Sum_probs=42.6
Q ss_pred CeEEEEcCcHHHHH-HHHHHHhcCCCCeEEEE-ecCCcchhhhhh-CCceeeccCccccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRL-VAEQWRQEHPGCQIYGQ-TMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~-l~~~L~~~~~g~~V~~~-~R~~~~~~~l~~-~~i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
+||.|+|+|.+|+. ..+.|.+ .++.+++++ ++++++...+.. .++..+....+..+++|+|+.|.++
T Consensus 2 iri~iIG~G~~g~~~~~~~l~~-~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~I~tp~ 71 (164)
T d1tlta1 2 LRIGVVGLGGIAQKAWLPVLAA-ASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSST 71 (164)
T ss_dssp EEEEEECCSTHHHHTHHHHHHS-CSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCT
T ss_pred CEEEEEcCCHHHHHHHHHHHHh-CCCcEEEEEEechhHhhhhhhhcccccccccchhhhhhcccccccccc
Confidence 58999999999976 4555544 357888865 566666554432 2343321111345789999887765
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=95.62 E-value=0.0086 Score=45.56 Aligned_cols=68 Identities=13% Similarity=0.156 Sum_probs=42.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEE-ecCCcch--hhhhhCCceeeccCc------cccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQ-TMTADHH--DELINMGITPSLKWT------EATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~-~R~~~~~--~~l~~~~i~~~~~d~------~~~~~~D~Vi~~a~~ 152 (272)
.||.|+|+|.+|+.+...+++++|..+++++ +|+++.. ..-...++....... ....++|+||.+.+.
T Consensus 5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~~d~l~~~~~~~~iDiVf~ATpa 81 (157)
T d1nvmb1 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSA 81 (157)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCH
T ss_pred cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccceeeeeecccccccCEEEEcCCc
Confidence 5899999999999765555566667788877 4554422 122334555443221 124578999887664
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=95.62 E-value=0.015 Score=46.99 Aligned_cols=71 Identities=10% Similarity=0.096 Sum_probs=51.9
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCccccCCCCEEEEecCCCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
+..++|+|-|.|.+|+++++.|.+. |.+|++.+.++.....+.. .+.+....+.-...+||+++-||-...
T Consensus 37 l~g~~v~IqG~GnVG~~~a~~L~~~--Gakvv~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~cDIl~PcA~~~~ 108 (230)
T d1leha1 37 LEGLAVSVQGLGNVAKALCKKLNTE--GAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCALGAV 108 (230)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECSCSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--CCEEEeecccHHHHHHHHHhcCCcccCCcccccccccEecccccccc
Confidence 4457999999999999999999999 9999999887666544332 343333222123458999999997654
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.61 E-value=0.014 Score=44.88 Aligned_cols=69 Identities=17% Similarity=0.187 Sum_probs=48.7
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhC-------C-ceee-ccCc-cccCCCCEEEEecC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------G-ITPS-LKWT-EATQKFPYVIFCAP 151 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~-------~-i~~~-~~d~-~~~~~~D~Vi~~a~ 151 (272)
...++|+|+|+|-.++.++..|.+. | +|+.+.|++++.+.+... . .... ..+. ......|.||+|-+
T Consensus 16 ~~~k~vlIlGaGG~arai~~aL~~~--~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp 92 (177)
T d1nvta1 16 VKDKNIVIYGAGGAARAVAFELAKD--N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATP 92 (177)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSS--S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSC
T ss_pred cCCCEEEEECCcHHHHHHHHHHccc--c-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCc
Confidence 3457899999999999999999776 6 999999998887655321 0 0111 1111 34668899999977
Q ss_pred CC
Q 024143 152 PS 153 (272)
Q Consensus 152 ~~ 153 (272)
..
T Consensus 93 ~g 94 (177)
T d1nvta1 93 IG 94 (177)
T ss_dssp TT
T ss_pred cc
Confidence 54
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=95.59 E-value=0.017 Score=44.65 Aligned_cols=69 Identities=13% Similarity=0.086 Sum_probs=48.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcchhhhhh--------CCceeec--c-Cc----cccCCCCEE
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN--------MGITPSL--K-WT----EATQKFPYV 146 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~~~~l~~--------~~i~~~~--~-d~----~~~~~~D~V 146 (272)
..++|+|+|+|-.|+.++..|.+. |. +++...|++++.+.+.. ....... . +. +.+..+|+|
T Consensus 17 ~~k~vlIlGaGGaarai~~al~~~--g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 94 (182)
T d1vi2a1 17 KGKTMVLLGAGGASTAIGAQGAIE--GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 94 (182)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred CCCEEEEECCcHHHHHHHHHHhhc--CCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence 347999999999999999999998 76 78888998776554321 1111111 1 11 235689999
Q ss_pred EEecCCC
Q 024143 147 IFCAPPS 153 (272)
Q Consensus 147 i~~a~~~ 153 (272)
|+|.+..
T Consensus 95 IN~Tp~G 101 (182)
T d1vi2a1 95 TNGTKVG 101 (182)
T ss_dssp EECSSTT
T ss_pred ccccCCc
Confidence 9998754
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.55 E-value=0.0075 Score=46.42 Aligned_cols=35 Identities=14% Similarity=0.059 Sum_probs=31.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCcc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADH 121 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~~ 121 (272)
+||+|+|+|..|-..+..|.+. |+ +|+++.|.+.-
T Consensus 5 ~kVaIIGaGpaGl~aA~~l~~~--G~~~V~v~E~~~~~ 40 (196)
T d1gtea4 5 AKIALLGAGPASISCASFLARL--GYSDITIFEKQEYV 40 (196)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSSSC
T ss_pred CEEEEECChHHHHHHHHHHHHC--CCCeEEEEEecCcc
Confidence 7999999999999999999999 98 59999887543
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=95.54 E-value=0.041 Score=42.36 Aligned_cols=70 Identities=10% Similarity=0.117 Sum_probs=41.7
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCC-C--C--eEEEEecCCcc--hhh----hhhC---Ccee-ecc-C-ccccCCCCEE
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHP-G--C--QIYGQTMTADH--HDE----LINM---GITP-SLK-W-TEATQKFPYV 146 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~-g--~--~V~~~~R~~~~--~~~----l~~~---~i~~-~~~-d-~~~~~~~D~V 146 (272)
.||.|+|| |.||++++-.|....- | . .+..++..+.. ... +... .... ... + .++++++|+|
T Consensus 25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aDvV 104 (175)
T d7mdha1 25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDWA 104 (175)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEE
T ss_pred cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCceE
Confidence 47999997 9999999999886410 1 1 44445544321 111 1111 1111 111 2 2578999999
Q ss_pred EEecCCCC
Q 024143 147 IFCAPPSR 154 (272)
Q Consensus 147 i~~a~~~~ 154 (272)
|.+++...
T Consensus 105 vi~ag~~r 112 (175)
T d7mdha1 105 LLIGAKPR 112 (175)
T ss_dssp EECCCCCC
T ss_pred EEeeccCC
Confidence 99998654
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=95.48 E-value=0.012 Score=45.12 Aligned_cols=66 Identities=12% Similarity=0.168 Sum_probs=47.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeE-EEEecCCcchhhhhhCCceeec--cCcc-------c-cCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQI-YGQTMTADHHDELINMGITPSL--KWTE-------A-TQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V-~~~~R~~~~~~~l~~~~i~~~~--~d~~-------~-~~~~D~Vi~~a~~ 152 (272)
.+|+|+|+|.+|...++.+... |.++ ++.++++++.+..++.|...+. .+.+ . -.++|+||.|.+.
T Consensus 30 ~~VlI~G~G~iG~~~~~~ak~~--g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~i~~~t~gg~D~vid~~G~ 106 (174)
T d1f8fa2 30 SSFVTWGAGAVGLSALLAAKVC--GASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGS 106 (174)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH--TCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCC
T ss_pred CEEEEeCCCHHHhhhhhccccc--ccceeeeeccHHHHHHHHHHcCCeEEEeCCCcCHHHHHHHHcCCCCcEEEEcCCc
Confidence 5899999999999999888888 7754 5667778777776666654332 1211 1 1368999999885
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=95.45 E-value=0.0096 Score=48.93 Aligned_cols=36 Identities=22% Similarity=0.264 Sum_probs=32.3
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
...+||+|+|+|.-|-..+..|.++ |++|+++.+.+
T Consensus 28 ~~pkkV~IIGaG~aGLsaA~~L~~~--G~~V~vlE~~~ 63 (370)
T d2iida1 28 SNPKHVVIVGAGMAGLSAAYVLAGA--GHQVTVLEASE 63 (370)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCC
Confidence 4557999999999999999999999 99999998753
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.44 E-value=0.0061 Score=50.14 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=30.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
+|+|+|+|..|..++..|.+. |++|.++.|.++
T Consensus 4 ~V~IvGaGp~Gl~~A~~L~~~--G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAGPSGLLLGQLLHKA--GIDNVILERQTP 36 (292)
T ss_dssp SEEEECCSHHHHHHHHHHHHH--TCCEEEECSSCH
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 799999999999999999999 999999998753
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=95.40 E-value=0.01 Score=42.54 Aligned_cols=34 Identities=12% Similarity=0.058 Sum_probs=31.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
++|+|+|+|++|..++..|... |.+|+.+.|.+.
T Consensus 23 ~~vvVvGgG~ig~E~A~~l~~~--g~~vt~i~~~~~ 56 (121)
T d1mo9a2 23 STVVVVGGSKTAVEYGCFFNAT--GRRTVMLVRTEP 56 (121)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHhc--chhheEeeccch
Confidence 6899999999999999999999 999999998754
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=95.36 E-value=0.0095 Score=50.30 Aligned_cols=34 Identities=26% Similarity=0.435 Sum_probs=31.2
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
++||+|+|||+-|...|..|.++ |++|.++.++.
T Consensus 2 ~KKI~IIGaG~sGL~aA~~L~k~--G~~V~viEk~~ 35 (314)
T d2bi7a1 2 SKKILIVGAGFSGAVIGRQLAEK--GHQVHIIDQRD 35 (314)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSS
T ss_pred CCEEEEECCcHHHHHHHHHHHhC--CCCEEEEECCC
Confidence 58999999999999999999999 99999998754
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.33 E-value=0.019 Score=44.19 Aligned_cols=69 Identities=17% Similarity=0.226 Sum_probs=45.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEec-CCcc-hhhhhhCCceeeccCc------------------cccCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM-TADH-HDELINMGITPSLKWT------------------EATQKF 143 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R-~~~~-~~~l~~~~i~~~~~d~------------------~~~~~~ 143 (272)
+.||.|-|.|.||+.+++.+.++ +..+|+++.- .++. ...+...+...+..+. +...++
T Consensus 2 ~irIaINGfGRIGR~v~Ral~~~-~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 80 (172)
T d2czca2 2 KVKVGVNGYGTIGKRVAYAVTKQ-DDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKV 80 (172)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-TTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred cEEEEEECCCHHHHHHHHHHHhC-CCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccC
Confidence 45899999999999999999876 4678887653 3322 2223333333322110 135689
Q ss_pred CEEEEecCCC
Q 024143 144 PYVIFCAPPS 153 (272)
Q Consensus 144 D~Vi~~a~~~ 153 (272)
|+||-|.+..
T Consensus 81 DvViEcTG~f 90 (172)
T d2czca2 81 DIIVDATPGG 90 (172)
T ss_dssp SEEEECCSTT
T ss_pred CEEEECCCCC
Confidence 9999999874
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.28 E-value=0.012 Score=44.34 Aligned_cols=67 Identities=18% Similarity=0.158 Sum_probs=36.3
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcC-CCCeEEEEecCCcchhhhhhCC--ceeeccCccccCCCCEEEEecCC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEH-PGCQIYGQTMTADHHDELINMG--ITPSLKWTEATQKFPYVIFCAPP 152 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~-~g~~V~~~~R~~~~~~~l~~~~--i~~~~~d~~~~~~~D~Vi~~a~~ 152 (272)
||.|+|+ ||+|..|++.|.+.+ |-.++..+..+...-..+.... ............+.|.++.+++.
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~~~~~d~~f~~~~~ 73 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGS 73 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTTTTTCSEEEECSCH
T ss_pred EEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhhhhhhhhhhhccCc
Confidence 7999997 999999998765441 3335554443221111111111 11111112356688888888764
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=95.24 E-value=0.012 Score=44.76 Aligned_cols=68 Identities=12% Similarity=0.075 Sum_probs=43.7
Q ss_pred CeEEEEcCcHHHHH-HHHHHHhcCCCCeEEEEecCCcchhhhhh-CCceeeccCc-ccc-CCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGRL-VAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT-EAT-QKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~~-l~~~L~~~~~g~~V~~~~R~~~~~~~l~~-~~i~~~~~d~-~~~-~~~D~Vi~~a~~~ 153 (272)
+||.|+|+|.+|+. ..+.|.+. ++.++.+.++++++...+.+ .++.....|. +.+ .++|+|+.|.++.
T Consensus 2 irvgiiG~G~~~~~~~~~~l~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iD~V~I~tp~~ 73 (167)
T d1xeaa1 2 LKIAMIGLGDIAQKAYLPVLAQW-PDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATD 73 (167)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTS-TTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGG
T ss_pred eEEEEEcCCHHHHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHhcccccccccHHHhcccccceeccccccc
Confidence 58999999999976 45555443 57788888887776655543 2333222332 233 3789998876653
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.17 E-value=0.017 Score=43.88 Aligned_cols=66 Identities=18% Similarity=0.261 Sum_probs=49.4
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCC-CeEEEEecCCcchhhhhhCCceeec--cCcc---------ccCCCCEEEEecC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSL--KWTE---------ATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g-~~V~~~~R~~~~~~~l~~~~i~~~~--~d~~---------~~~~~D~Vi~~a~ 151 (272)
.+|+|+|+ |-+|...++.+... | .+|++.++++++.+.+++.|.+... .+.+ .-.++|+||.|++
T Consensus 29 ~~vlV~G~~G~vG~~~~~~~~~~--g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g 106 (170)
T d1jvba2 29 KTLLVVGAGGGLGTMAVQIAKAV--SGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNN 106 (170)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred CEEEEEeccccceeeeeeccccc--ccccccccccchhhHHHHHHcCCceeeccCCcCHHHHHHHHhhcccchhhhcccc
Confidence 58999996 99999999888888 7 5899999998888777776754432 1111 1246899999887
Q ss_pred C
Q 024143 152 P 152 (272)
Q Consensus 152 ~ 152 (272)
.
T Consensus 107 ~ 107 (170)
T d1jvba2 107 S 107 (170)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=95.06 E-value=0.011 Score=47.65 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=30.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
|+|+|+|+|.-|-..+.+|.++ |++|+++.+++
T Consensus 1 m~V~IIGaG~aGL~aA~~L~~~--G~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVGGGISGLAVAHHLRSR--GTDAVLLESSA 33 (347)
T ss_dssp CCEEEECCBHHHHHHHHHHHTT--TCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCCEEEEecCC
Confidence 5899999999999999999999 99999998753
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=94.96 E-value=0.013 Score=47.12 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=30.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
|||+|+|+|.-|-..+.+|.++ |++|+++.+++
T Consensus 2 KkV~IIGaG~aGL~aA~~La~~--G~~V~vlE~~~ 34 (373)
T d1seza1 2 KRVAVIGAGVSGLAAAYKLKIH--GLNVTVFEAEG 34 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--SCEEEEECSSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCEEEEeCCC
Confidence 7899999999999999999999 99999998753
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=94.88 E-value=0.012 Score=49.24 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=31.0
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
|..|+|+|||+-|..+|+.|.+. |++|.++.++.
T Consensus 1 M~dv~IIGaG~sGl~~A~~L~~~--g~~V~iiEk~~ 34 (298)
T d1i8ta1 1 MYDYIIVGSGLFGAVCANELKKL--NKKVLVIEKRN 34 (298)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG--TCCEEEECSSS
T ss_pred CccEEEECCcHHHHHHHHHHHhC--CCcEEEEECCC
Confidence 56899999999999999999999 99999998754
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=94.87 E-value=0.053 Score=41.05 Aligned_cols=67 Identities=12% Similarity=0.187 Sum_probs=49.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeecc--Cc-----c-----ccCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK--WT-----E-----ATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~--d~-----~-----~~~~~D~Vi~~a~~ 152 (272)
.+|+|+|+|-+|...+..+... .+.+|+++++++++.+...+.|.+.... +. + .-.++|+||.+.+.
T Consensus 30 ~~VlI~G~Gg~g~~~~~~~~~~-g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~~G~ 108 (175)
T d1cdoa2 30 STCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGN 108 (175)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCC
T ss_pred CEEEEEecCCccchHHHHHHHH-hhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeeecCC
Confidence 5799999988888888877776 1447999999999988877788655431 11 0 12479999999985
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=94.81 E-value=0.015 Score=44.31 Aligned_cols=70 Identities=11% Similarity=0.052 Sum_probs=43.8
Q ss_pred CeEEEEcCcHHHHHHHHH-HHhc---CCCCeEEEEecCCcchhhhh-------hCCceeec-cC-ccccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQ-WRQE---HPGCQIYGQTMTADHHDELI-------NMGITPSL-KW-TEATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~-L~~~---~~g~~V~~~~R~~~~~~~l~-------~~~i~~~~-~d-~~~~~~~D~Vi~~a~ 151 (272)
|||.|+|+|-+|...+-. |... .+..++..++.++++..... ........ .+ .++++++|+||.+++
T Consensus 1 mKIaiIGaGs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita~ 80 (162)
T d1up7a1 1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFR 80 (162)
T ss_dssp CEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEecc
Confidence 589999998777655532 3222 12458999999877654221 11222222 22 257899999999998
Q ss_pred CCC
Q 024143 152 PSR 154 (272)
Q Consensus 152 ~~~ 154 (272)
...
T Consensus 81 ~~~ 83 (162)
T d1up7a1 81 PGG 83 (162)
T ss_dssp TTH
T ss_pred cCC
Confidence 753
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=94.78 E-value=0.017 Score=48.61 Aligned_cols=38 Identities=18% Similarity=0.123 Sum_probs=31.8
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
.||||+|+|+|.-|-..+..|+++..+++|+++.|+.+
T Consensus 3 ~~KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 3 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 47899999999999999999988722469999988753
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.68 E-value=0.029 Score=44.76 Aligned_cols=37 Identities=22% Similarity=0.299 Sum_probs=32.7
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
...++|+|+|+|+-|-..+..|.++ |++|+.+.+...
T Consensus 47 ~~~k~VvIIGaGpAGl~aA~~l~~~--G~~v~l~E~~~~ 83 (233)
T d1djqa3 47 KNKDSVLIVGAGPSGSEAARVLMES--GYTVHLTDTAEK 83 (233)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred cCCceEEEEcccHHHHHHHHHHHHh--ccceeeEeeccc
Confidence 3457999999999999999999999 999999987643
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=94.58 E-value=0.017 Score=47.62 Aligned_cols=33 Identities=21% Similarity=0.408 Sum_probs=29.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA 119 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~ 119 (272)
++|+|+|+|.+|..++.+|.++ |. +|+++.|++
T Consensus 2 ~dViIIGaGi~G~s~A~~La~~--G~~~V~liE~~~ 35 (305)
T d1pj5a2 2 PRIVIIGAGIVGTNLADELVTR--GWNNITVLDQGP 35 (305)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHc--CCCcEEEEeCCC
Confidence 5899999999999999999999 85 699998864
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=94.54 E-value=0.019 Score=44.78 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=29.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA 119 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~ 119 (272)
++|+|+|+|.-|-..+..|.++ |+ +|+++.+++
T Consensus 1 P~V~IIGaG~aGL~aA~~L~~~--G~~~V~vlE~~~ 34 (347)
T d1b5qa1 1 PRVIVVGAGMSGISAAKRLSEA--GITDLLILEATD 34 (347)
T ss_dssp CCEEEECCBHHHHHHHHHHHHT--TCCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhC--CCCcEEEEECCC
Confidence 4899999999999999999999 96 699998754
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=94.53 E-value=0.075 Score=38.63 Aligned_cols=51 Identities=20% Similarity=0.231 Sum_probs=37.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~ 153 (272)
|||.|.|+ |..|+.|.+.+.++ ++++.+-.-. ...+.+.++|+||..-.|.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~--~~~l~~~id~----------------~~~~~~~~~DVvIDFS~p~ 52 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEK--GHELVLKVDV----------------NGVEELDSPDVVIDFSSPE 52 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEET----------------TEEEECSCCSEEEECSCGG
T ss_pred CEEEEECCCCHHHHHHHHHHhcC--CCeEEEEECC----------------CcHHHhccCCEEEEecCHH
Confidence 58999997 99999999988888 9988754210 0113456789999777664
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=94.28 E-value=0.048 Score=41.79 Aligned_cols=69 Identities=20% Similarity=0.308 Sum_probs=44.6
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEec-CCcc-hhhhhhCCceeeccCc------------------cccCCC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM-TADH-HDELINMGITPSLKWT------------------EATQKF 143 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R-~~~~-~~~l~~~~i~~~~~d~------------------~~~~~~ 143 (272)
|++|.|-|.|.||+.+++.|.++ ++.+|+++.- .+.. ...+...+........ ++..++
T Consensus 1 M~~VgINGfGRIGR~v~R~l~~~-~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v 79 (171)
T d1cf2o1 1 MKAVAINGYGTVGKRVADAIAQQ-DDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA 79 (171)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTS-SSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred CeEEEEEcCcHHHHHHHHHHHhC-CCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence 67999999999999999988776 3578887653 3322 1222222322221110 134689
Q ss_pred CEEEEecCCC
Q 024143 144 PYVIFCAPPS 153 (272)
Q Consensus 144 D~Vi~~a~~~ 153 (272)
|+||-|-+..
T Consensus 80 DvViEcTG~f 89 (171)
T d1cf2o1 80 DIVIDCTPEG 89 (171)
T ss_dssp SEEEECCSTT
T ss_pred CEEEEccCCC
Confidence 9999998874
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=94.13 E-value=0.043 Score=41.98 Aligned_cols=71 Identities=11% Similarity=0.102 Sum_probs=45.2
Q ss_pred CCeEEEEcCcHHHHH--HHHHHHhc--CCCCeEEEEecCCcchhhhh--------hC--Cceeec-cCc-cccCCCCEEE
Q 024143 84 ENDLLIVGPGVLGRL--VAEQWRQE--HPGCQIYGQTMTADHHDELI--------NM--GITPSL-KWT-EATQKFPYVI 147 (272)
Q Consensus 84 ~~~IlItGaGfiG~~--l~~~L~~~--~~g~~V~~~~R~~~~~~~l~--------~~--~i~~~~-~d~-~~~~~~D~Vi 147 (272)
.+||.|+|+|.+|.. ++..|+.. ..+.+++.+++++++.+... .. ..+... .|. +++.++|+|+
T Consensus 2 ~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~Vv 81 (171)
T d1obba1 2 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 81 (171)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeEe
Confidence 379999999999865 33334332 11459999999877654311 11 122221 232 5789999999
Q ss_pred EecCCCC
Q 024143 148 FCAPPSR 154 (272)
Q Consensus 148 ~~a~~~~ 154 (272)
.++....
T Consensus 82 ~~~~~g~ 88 (171)
T d1obba1 82 NTAMVGG 88 (171)
T ss_dssp ECCCTTH
T ss_pred eeccccc
Confidence 9988754
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=94.11 E-value=0.096 Score=38.00 Aligned_cols=68 Identities=16% Similarity=0.151 Sum_probs=45.1
Q ss_pred cCCCeEEEEcCc-----------HHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccC--cc------ccCC
Q 024143 82 VGENDLLIVGPG-----------VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW--TE------ATQK 142 (272)
Q Consensus 82 ~~~~~IlItGaG-----------fiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d--~~------~~~~ 142 (272)
...+||||+|+| |-+.+.+++|++. |++++.+..+|+....-....-..+... .+ ..++
T Consensus 5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~--g~~~iliN~NP~TVstd~d~aD~lYfePlt~e~v~~Ii~~E~ 82 (127)
T d1a9xa3 5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREE--GYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKER 82 (127)
T ss_dssp SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHH--TCEEEEECSCTTCGGGCGGGSSEEECSCCCHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHc--CCeEEEecCchHhhhcChhhcceeeeecCCHHHHHHHHHHhC
Confidence 345799999986 5678999999999 9999999988876532211111222111 11 2458
Q ss_pred CCEEEEecC
Q 024143 143 FPYVIFCAP 151 (272)
Q Consensus 143 ~D~Vi~~a~ 151 (272)
+|.|+-..+
T Consensus 83 pd~il~~~G 91 (127)
T d1a9xa3 83 PDAVLPTMG 91 (127)
T ss_dssp CSEEECSSS
T ss_pred cCCeEEEee
Confidence 888876655
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=94.04 E-value=0.024 Score=42.93 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=27.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
++|+|+|+|++|-.++..|.+. |.+|..+.+.
T Consensus 4 ~~VvIIGgG~~G~e~A~~l~~~--g~~v~v~~~~ 35 (185)
T d1q1ra1 4 DNVVIVGTGLAGVEVAFGLRAS--GWEGNIRLVG 35 (185)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEEC
T ss_pred CCEEEECCcHHHHHHHHHHHHc--CCceEEEEec
Confidence 5899999999999999999999 8877665544
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=93.93 E-value=0.036 Score=43.75 Aligned_cols=36 Identities=17% Similarity=0.203 Sum_probs=31.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
+||.|+|+|.-|...+..|.++..|++|+.+.+.+.
T Consensus 2 ~kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 2 PQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CeEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 699999999999999999987655899999988654
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.91 E-value=0.037 Score=44.31 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=30.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~~~ 120 (272)
.+|+|+|+|.-|..++..|.+. |. +|+++.|++.
T Consensus 2 ~~V~IvGaG~aGl~~A~~L~~~--Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 2 IDILIAGAGIGGLSCALALHQA--GIGKVTLLESSSE 36 (288)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESSSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCeEEEEeCCCC
Confidence 5899999999999999999999 95 8999988654
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.87 E-value=0.035 Score=41.30 Aligned_cols=35 Identities=17% Similarity=0.361 Sum_probs=30.9
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
+..++|||+|+|.+|..-++.|++. |.+|+++...
T Consensus 11 l~gkrvLViGgG~va~~ka~~Ll~~--GA~VtVvap~ 45 (150)
T d1kyqa1 11 LKDKRILLIGGGEVGLTRLYKLMPT--GCKLTLVSPD 45 (150)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGG--TCEEEEEEEE
T ss_pred eCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCC
Confidence 3457999999999999999999999 9999998653
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=93.83 E-value=0.033 Score=40.47 Aligned_cols=91 Identities=14% Similarity=0.039 Sum_probs=52.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEec-CCcchhhhhhCCceeeccCc--c-ccCCCCEEEEecCCCCCCChHH
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELINMGITPSLKWT--E-ATQKFPYVIFCAPPSRSLDYPG 160 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R-~~~~~~~l~~~~i~~~~~d~--~-~~~~~D~Vi~~a~~~~~~~~~~ 160 (272)
.+|+|.|||.+|+.|++.+... .+++++++.- ++.+... .-.|+..+..+. + ..+.++.++.+.+.. ..+
T Consensus 4 ~~v~I~GaG~~G~~l~~~l~~~-~~~~iv~fiDdd~~k~G~-~I~Gi~V~~~~~l~~~~~~~i~iai~~i~~~----~~~ 77 (126)
T d2dt5a2 4 WGLCIVGMGRLGSALADYPGFG-ESFELRGFFDVDPEKVGR-PVRGGVIEHVDLLPQRVPGRIEIALLTVPRE----AAQ 77 (126)
T ss_dssp EEEEEECCSHHHHHHHHCSCCC-SSEEEEEEEESCTTTTTC-EETTEEEEEGGGHHHHSTTTCCEEEECSCHH----HHH
T ss_pred ceEEEEcCCHHHHHHHHhHhhc-CCcEEEEEEeCchHhcCC-EECCEEEecHHHHHHHHhhcccEEEEeCCHH----HHH
Confidence 3799999999999999987543 3889988754 4444322 123555553332 1 234566666665532 122
Q ss_pred HHHHHHHHhcCCCeEEEEecce
Q 024143 161 DVRLAALSWNGEGSFLFTSSSA 182 (272)
Q Consensus 161 ~~~~l~~~~~gvkr~V~~SS~~ 182 (272)
.+...+ ...|++.+.-++...
T Consensus 78 ~I~d~l-~~~gIk~I~~f~~~~ 98 (126)
T d2dt5a2 78 KAADLL-VAAGIKGILNFAPVV 98 (126)
T ss_dssp HHHHHH-HHHTCCEEEECSSSC
T ss_pred HHHHHH-HHcCCCEEeecCcee
Confidence 222222 345788776665443
|
| >d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Actinorhodin polyketide synthase acyl carrier protein, ACT ACP species: Streptomyces coelicolor, A3(2) [TaxId: 1902]
Probab=93.80 E-value=0.0012 Score=45.22 Aligned_cols=44 Identities=7% Similarity=-0.105 Sum_probs=38.1
Q ss_pred ccccccCCcchhhhcc-ccccccc--cccccceeccccccccccccc
Q 024143 17 TRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNFQ 60 (272)
Q Consensus 17 ~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 60 (272)
.+|+|+|.+|+++.++ ..+++.+ .+|...+|..+|...++..+.
T Consensus 33 ~~f~dlG~DSl~~~~l~~~l~~~~g~~l~~~~~~~~~Tv~~l~~~i~ 79 (86)
T d2af8a_ 33 LRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLIN 79 (86)
T ss_dssp SSHHHHTCSSHHHHHHHHHHHHHHTCCCCCSTTTTCCCHHHHHHHHH
T ss_pred CCHHHcCCCHHHHHHHHHHHHHHHccCcCHHHHHcCCCHHHHHHHHH
Confidence 7899999999999999 9999998 888888999998877765543
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.76 E-value=0.0053 Score=48.71 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=24.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEE
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIY 113 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~ 113 (272)
|||+|+|+|.+|...+.+|.++ |++|+
T Consensus 1 mkV~VIGaGi~GlstA~~L~~~--G~~v~ 27 (246)
T d1kifa1 1 MRVVVIGAGVIGLSTALCIHER--YHSVL 27 (246)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--HTTTS
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCCce
Confidence 5899999999999999999999 87654
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.62 E-value=0.034 Score=43.05 Aligned_cols=32 Identities=13% Similarity=0.348 Sum_probs=29.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
.|+|+|+|.-|...|.+|.++ |++|.++.+++
T Consensus 7 DviViGaG~~Gl~~A~~La~~--G~~V~vlE~~~ 38 (297)
T d2bcgg1 7 DVIVLGTGITECILSGLLSVD--GKKVLHIDKQD 38 (297)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCCEEEEcCCC
Confidence 489999999999999999999 99999998864
|
| >d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Thermotoga maritima [TaxId: 2336]
Probab=93.61 E-value=0.0026 Score=43.18 Aligned_cols=55 Identities=7% Similarity=0.034 Sum_probs=41.2
Q ss_pred ceeeecccCccccc----ccccccCCcchhhhcc-ccccccc--cccccceeccccccccccc
Q 024143 3 TISCTNTVSLNGAC----TRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATN 58 (272)
Q Consensus 3 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~ 58 (272)
.||+..+. +.+.. ++|+|+|.+|+.+-+| ..+++.+ .+|...+|..+|...++..
T Consensus 15 ~iv~~~l~-~~~~~i~~~~~~~dlG~DSl~~v~l~~~ie~~f~i~i~~~~~~~~~Tv~~l~~~ 76 (85)
T d1vkua_ 15 EIASEKMG-KDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDI 76 (85)
T ss_dssp HHHHHTTC-CCCCSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHH
T ss_pred HHHHHHHC-CCHHHCCCCCCHHHhcCcchHHHHHHHHHHHHccCCCCHHHHHHcCCHHHHHHH
Confidence 46666663 33222 8899999999988899 9999998 7777778887776665543
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=93.57 E-value=0.039 Score=41.16 Aligned_cols=30 Identities=23% Similarity=0.243 Sum_probs=26.5
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
||+|+|+|++|-.++..|. + +.+|+.+.|.
T Consensus 2 rVvIIGgG~~G~e~A~~l~-~--~~~Vtvv~~~ 31 (167)
T d1xhca1 2 KVVIVGNGPGGFELAKQLS-Q--TYEVTVIDKE 31 (167)
T ss_dssp EEEEECCSHHHHHHHHHHT-T--TSEEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHH-c--CCCEEEEecc
Confidence 8999999999999999885 5 6799998874
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=93.49 E-value=0.022 Score=43.48 Aligned_cols=31 Identities=19% Similarity=0.302 Sum_probs=25.8
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEec
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R 117 (272)
.+|+|+|+|++|-.++..|.+. |++|..+.+
T Consensus 4 a~VvIIGgG~~G~e~A~~l~~~--g~~v~i~~~ 34 (183)
T d1d7ya1 4 APVVVLGAGLASVSFVAELRQA--GYQGLITVV 34 (183)
T ss_dssp SSEEEECCSHHHHHHHHHHHHH--TCCSCEEEE
T ss_pred CCEEEECccHHHHHHHHHHHhc--CCceEEEEE
Confidence 4799999999999999999999 766555443
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=93.36 E-value=0.037 Score=44.91 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=29.2
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
.|+|+|+|..|..++.+|.++ |++|+++.+.
T Consensus 5 DvvIIGaGi~Gls~A~~La~~--G~~V~viE~~ 35 (281)
T d2gf3a1 5 DVIVVGAGSMGMAAGYQLAKQ--GVKTLLVDAF 35 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCcEEEEeCC
Confidence 499999999999999999999 9999999885
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=93.34 E-value=0.047 Score=41.69 Aligned_cols=70 Identities=11% Similarity=0.047 Sum_probs=44.1
Q ss_pred CeEEEEcCcHHHHH-HHHHHHhcCCC---CeEEEEecCCcchhhhh--------h--CCceee-ccCc-cccCCCCEEEE
Q 024143 85 NDLLIVGPGVLGRL-VAEQWRQEHPG---CQIYGQTMTADHHDELI--------N--MGITPS-LKWT-EATQKFPYVIF 148 (272)
Q Consensus 85 ~~IlItGaGfiG~~-l~~~L~~~~~g---~~V~~~~R~~~~~~~l~--------~--~~i~~~-~~d~-~~~~~~D~Vi~ 148 (272)
.||.|+|+|.+|.. ++..++...+. -+|+.++.++++++... . ...... ..|. ++++++|+||.
T Consensus 4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~Vvi 83 (167)
T d1u8xx1 4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVMA 83 (167)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEEE
T ss_pred ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEEEE
Confidence 48999999877764 33444443222 38999999887654211 0 112222 2243 57899999999
Q ss_pred ecCCCC
Q 024143 149 CAPPSR 154 (272)
Q Consensus 149 ~a~~~~ 154 (272)
+++...
T Consensus 84 tag~~~ 89 (167)
T d1u8xx1 84 HIRVGK 89 (167)
T ss_dssp CCCTTH
T ss_pred CCCcCC
Confidence 998754
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=93.34 E-value=0.051 Score=38.59 Aligned_cols=36 Identities=19% Similarity=0.143 Sum_probs=28.1
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCC-CCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHP-GCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~-g~~V~~~~R~~~ 120 (272)
++++|+|+|++|-.++..|.+... +.+|+.+.|.+.
T Consensus 21 ~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 21 RRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 689999999999999976654311 678999988654
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.34 E-value=0.059 Score=43.53 Aligned_cols=33 Identities=24% Similarity=0.346 Sum_probs=29.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
.+||+|+|+|.-|-..+.+|.++ |++|+++-.+
T Consensus 5 ~~kViVIGaG~aGL~aA~~L~~~--G~~V~VlEa~ 37 (449)
T d2dw4a2 5 TGKVIIIGSGVSGLAAARQLQSF--GMDVTLLEAR 37 (449)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHT--TCEEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCCEEEEeCC
Confidence 46899999999999999999999 9999998654
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.20 E-value=0.056 Score=39.52 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=28.5
Q ss_pred CeEEEEcCcHHHHHHHHHHH----hcCCCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWR----QEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~----~~~~g~~V~~~~R~~~ 120 (272)
++++|+|+|++|-.++..|. +. |.+|+.+.+.+.
T Consensus 38 k~i~IvGgG~~G~E~A~~l~~~~~~~--g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 38 KSITIIGGGFLGSELACALGRKARAL--GTEVIQLFPEKG 75 (137)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHH--TCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHhc--CCEEEEeccccc
Confidence 68999999999999998884 45 899999887543
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=92.98 E-value=0.06 Score=38.12 Aligned_cols=36 Identities=19% Similarity=0.091 Sum_probs=28.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcC-CCCeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEH-PGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~-~g~~V~~~~R~~~ 120 (272)
++++|+|+|++|-.++..|.+.. .|.+|+.+.|.+.
T Consensus 19 ~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 19 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CeEEEECCChHHHHHHHHhHhhcccccccceeccccc
Confidence 68999999999999997654321 1889999988654
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.92 E-value=0.094 Score=38.84 Aligned_cols=34 Identities=12% Similarity=0.099 Sum_probs=29.6
Q ss_pred CeEEEE--cCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 85 NDLLIV--GPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlIt--GaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
+.++|+ |.||+|..++..|.+. |++|+.+.+.+.
T Consensus 40 ~~vvi~d~ggg~ig~e~A~~la~~--G~~Vtlv~~~~~ 75 (156)
T d1djqa2 40 KRVVILNADTYFMAPSLAEKLATA--GHEVTIVSGVHL 75 (156)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHT--TCEEEEEESSCT
T ss_pred CceEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCc
Confidence 456666 7899999999999999 999999998754
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=92.85 E-value=0.16 Score=36.38 Aligned_cols=38 Identities=11% Similarity=0.219 Sum_probs=32.6
Q ss_pred CCeEEEEcCc-----------HHHHHHHHHHHhcCCCCeEEEEecCCcchh
Q 024143 84 ENDLLIVGPG-----------VLGRLVAEQWRQEHPGCQIYGQTMTADHHD 123 (272)
Q Consensus 84 ~~~IlItGaG-----------fiG~~l~~~L~~~~~g~~V~~~~R~~~~~~ 123 (272)
.+||||+|+| |-+.+.++.|++. |++++.+..+|+...
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~--g~~~IliN~NPeTVs 52 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALRED--GYETIMVNCNPETVS 52 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHT--TCEEEEECCCTTSST
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhc--CCeEEEEecChhhhh
Confidence 4799999986 6778999999999 999999988877653
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=92.82 E-value=0.053 Score=45.18 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=30.5
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
.|+|+|||+-|-..+..|+++ |.+|+++.+.++
T Consensus 9 dV~IIGAG~sGl~~a~~L~~~--G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 9 DVLVVGAGFSGLYALYRLREL--GRSVHVIETAGD 41 (298)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred CEEEECccHHHHHHHHHHHhC--CCCEEEEEcCCC
Confidence 699999999999999999999 999999988654
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=92.79 E-value=0.2 Score=36.20 Aligned_cols=88 Identities=10% Similarity=0.200 Sum_probs=56.2
Q ss_pred cCCCeEEEEcC----cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCCCCC
Q 024143 82 VGENDLLIVGP----GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLD 157 (272)
Q Consensus 82 ~~~~~IlItGa----GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~~~~ 157 (272)
+..++|.|+|+ |..|..+.+.|++.+ .++|+.+....+.. .|...+..=.+.-..+|.++.+.++..
T Consensus 6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~-~g~v~pVnP~~~~i-----~G~~~y~sl~dlp~~vDlvvi~vp~~~--- 76 (129)
T d2csua1 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKEEEV-----QGVKAYKSVKDIPDEIDLAIIVVPKRF--- 76 (129)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSSCSEE-----TTEECBSSTTSCSSCCSEEEECSCHHH---
T ss_pred CCCCeEEEEccCCCCCCcHHHHHHHHHHcC-CCcEEEeccCcccc-----CCeEeecchhhcCCCCceEEEecChHH---
Confidence 44578999994 789999999998761 37999886543332 344444211133457899998887532
Q ss_pred hHHHHHHHHHHhcCCCeEEEEec
Q 024143 158 YPGDVRLAALSWNGEGSFLFTSS 180 (272)
Q Consensus 158 ~~~~~~~l~~~~~gvkr~V~~SS 180 (272)
..+.++.+ .+.|++.++.+|+
T Consensus 77 ~~~~~~~~--~~~g~~~~vi~s~ 97 (129)
T d2csua1 77 VKDTLIQC--GEKGVKGVVIITA 97 (129)
T ss_dssp HHHHHHHH--HHHTCCEEEECCC
T ss_pred hHHHHHHH--HHcCCCEEEEecc
Confidence 12233333 3568888888875
|
| >d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: apo-D-alanyl carrier protein domain: apo-D-alanyl carrier protein species: Lactobacillus casei [TaxId: 1582]
Probab=92.65 E-value=0.011 Score=39.60 Aligned_cols=31 Identities=6% Similarity=0.039 Sum_probs=25.7
Q ss_pred ccccccCC-cchhhhcc-ccccccccc--ccccee
Q 024143 17 TRFFAADS-LSSKASSV-FFNNRTWKL--KLRPLV 47 (272)
Q Consensus 17 ~~~~~~~~-~~~~~~~~-~~~~~~~~~--~~~~~~ 47 (272)
++||+.|| +|+.+-++ ..++++|++ |...++
T Consensus 28 ~~l~e~gglDSl~~vel~~~ie~~fgi~i~~~~l~ 62 (80)
T d1dv5a_ 28 LNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFD 62 (80)
T ss_dssp CCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCC
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHCCCCCHHHhh
Confidence 88999987 99999899 999999955 444555
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=92.53 E-value=0.1 Score=39.78 Aligned_cols=68 Identities=21% Similarity=0.146 Sum_probs=41.6
Q ss_pred CeEEEEcCcHHHHH-HHHHHHhcCCCCeEEEE-ecCCcchhhhhh-CCceeeccCc-ccc--CCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRL-VAEQWRQEHPGCQIYGQ-TMTADHHDELIN-MGITPSLKWT-EAT--QKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~-l~~~L~~~~~g~~V~~~-~R~~~~~~~l~~-~~i~~~~~d~-~~~--~~~D~Vi~~a~~ 152 (272)
.||.|+|+|.+|+. .++.+.+.....+|+++ ++++++...+.. .+......+. +.+ .++|+|+.+.++
T Consensus 4 irigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~ell~~~~id~v~I~tp~ 77 (181)
T d1zh8a1 4 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPV 77 (181)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCG
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeeeeeccccccccceeeccccc
Confidence 37899999999986 46777664213577754 566655554432 2333333333 222 478999887664
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=92.35 E-value=0.08 Score=40.46 Aligned_cols=67 Identities=12% Similarity=0.115 Sum_probs=43.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEE-ecCCcchhhhhh-CCcee---eccCcc-c--cCCCCEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELIN-MGITP---SLKWTE-A--TQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~-~R~~~~~~~l~~-~~i~~---~~~d~~-~--~~~~D~Vi~~a~~ 152 (272)
.||.|+|+|.+|+..++.|... ++.+|+++ ++++++...+.. .++.. ...|.+ . -.++|+|+.+.++
T Consensus 2 iki~iIG~G~~g~~~~~~l~~~-~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~iD~v~I~tp~ 76 (184)
T d1ydwa1 2 IRIGVMGCADIARKVSRAIHLA-PNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPT 76 (184)
T ss_dssp EEEEEESCCTTHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCG
T ss_pred eEEEEEcCCHHHHHHHHHHHhC-CCCEEEEEEeCCccccccchhccccccceeecCcHHHhhhccccceeeecccc
Confidence 4899999999999999988765 47788865 666655444322 22211 122322 2 2578999877654
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=92.31 E-value=0.32 Score=34.38 Aligned_cols=81 Identities=16% Similarity=0.240 Sum_probs=51.6
Q ss_pred CeEEEEcC----cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCCCCChHH
Q 024143 85 NDLLIVGP----GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPG 160 (272)
Q Consensus 85 ~~IlItGa----GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~~~~~~~ 160 (272)
++|.|+|+ |..|..+.+.|++. |++|+.+....+.. .|...+..-.+.-..+|.++.+.++.. ..+
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~--g~~V~pVnP~~~~i-----~G~~~y~sl~~lp~~~D~vvi~vp~~~---~~~ 71 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNYDEI-----EGLKCYRSVRELPKDVDVIVFVVPPKV---GLQ 71 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE-----TTEECBSSGGGSCTTCCEEEECSCHHH---HHH
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHC--CCEEEEEccccccc-----cCccccccchhccccceEEEEEeCHHH---HHH
Confidence 57899993 78999999999999 99998875433222 344444221133457899988877532 122
Q ss_pred HHHHHHHHhcCCCeEEE
Q 024143 161 DVRLAALSWNGEGSFLF 177 (272)
Q Consensus 161 ~~~~l~~~~~gvkr~V~ 177 (272)
.++.++ ..|++.+++
T Consensus 72 ~l~~~~--~~g~k~v~~ 86 (116)
T d1y81a1 72 VAKEAV--EAGFKKLWF 86 (116)
T ss_dssp HHHHHH--HTTCCEEEE
T ss_pred HHHHHH--hcCCceEEe
Confidence 333332 457776644
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.09 E-value=0.18 Score=42.29 Aligned_cols=67 Identities=13% Similarity=0.189 Sum_probs=48.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhh----hhCCceeeccCccccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMGITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l----~~~~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
+++.|+|+|..++.-++.|....+=.+|++.+|++++.+.+ ...++.......++..++|+|+-|-+
T Consensus 126 ~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~~~a~~~aDiV~taT~ 196 (320)
T d1omoa_ 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEASRCDVLVTTTP 196 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHTSSSEEEECCC
T ss_pred cEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccchhhhhccccEEEEecc
Confidence 57899999999999999998875556999999998765443 23344444333356789999875544
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=91.89 E-value=0.25 Score=40.05 Aligned_cols=34 Identities=12% Similarity=0.103 Sum_probs=29.9
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEec
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R 117 (272)
...+||.|-|.|.+|+++++.|.+. |.+|++++-
T Consensus 34 l~g~~v~IQGfGnVG~~~a~~L~e~--GakvvavsD 67 (255)
T d1bgva1 34 LVGKTVALAGFGNVAWGAAKKLAEL--GAKAVTLSG 67 (255)
T ss_dssp STTCEEEECCSSHHHHHHHHHHHHH--TCEEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCeEEEEec
Confidence 3457999999999999999999999 999998753
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.83 E-value=0.18 Score=44.09 Aligned_cols=32 Identities=28% Similarity=0.373 Sum_probs=28.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMT 118 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~ 118 (272)
.||||+|+|-||+.+++.|... |. +++.++.+
T Consensus 38 ~kVlvvG~GglG~ei~k~L~~~--Gvg~i~lvD~D 70 (426)
T d1yovb1 38 CKVLVIGAGGLGCELLKNLALS--GFRQIHVIDMD 70 (426)
T ss_dssp CCEEEECSSTTHHHHHHHHHTT--TCCCEEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCCeEEEEECC
Confidence 5899999999999999999998 87 78888765
|
| >d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Oxytetracycline polyketide synthase acyl carrier species: Streptomyces rimosus [TaxId: 1927]
Probab=91.53 E-value=0.0055 Score=42.56 Aligned_cols=44 Identities=11% Similarity=-0.023 Sum_probs=38.6
Q ss_pred ccccccCCcchhhhcc-ccccccc--cccccceeccccccccccccc
Q 024143 17 TRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNFQ 60 (272)
Q Consensus 17 ~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 60 (272)
.+|+|+|..|+++-++ ..+++.+ ++|...+|..+|...++..+.
T Consensus 32 ~~f~dlG~DSl~~~el~~~le~~~gv~l~~~~~~~~~Ti~~l~~~l~ 78 (95)
T d1nq4a_ 32 VAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTN 78 (95)
T ss_dssp SCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHH
T ss_pred CCHHHcCCcHHHHHHHHHHHHHHhcCCCCHHHHhcCCCHHHHHHHHH
Confidence 7899999999999999 9999998 777888999998888876653
|
| >d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Frenolicin polyketide synthase acyl carrier protein, Fren ACP species: Streptomyces roseofulvus [TaxId: 33902]
Probab=91.48 E-value=0.0063 Score=41.08 Aligned_cols=45 Identities=9% Similarity=0.006 Sum_probs=37.5
Q ss_pred ccccccCCcchhhhcc-ccccccc--cccccceecccccccccccccc
Q 024143 17 TRFFAADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNFQV 61 (272)
Q Consensus 17 ~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 61 (272)
.+|+|+|..|+.+-++ -.+++++ .+|-..+|..+|...+...+..
T Consensus 30 ~~f~dlG~DSl~~~el~~~le~~~g~~l~~~~~~~~~Ti~~l~~~v~~ 77 (82)
T d1or5a_ 30 TPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNT 77 (82)
T ss_dssp SCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTT
T ss_pred cCHHHcCCChHhHHHHHHHHHHHHhCcCCHHHHHcCCCHHHHHHHHHh
Confidence 6799999999999899 9999998 6666788899988887765533
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=91.46 E-value=0.2 Score=36.77 Aligned_cols=82 Identities=16% Similarity=0.144 Sum_probs=52.6
Q ss_pred CCeEEEEcC----cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCCCCChH
Q 024143 84 ENDLLIVGP----GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYP 159 (272)
Q Consensus 84 ~~~IlItGa----GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~~~~~~ 159 (272)
.++|.|+|+ +-.|..+++.|++. ||+|+.+....... .|...+..-.+.-..+|.|+.+.++.. ..
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~--g~~v~pVnP~~~~i-----~G~~~~~sl~dlp~~iD~v~i~vp~~~---~~ 88 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEH--GYDVYPVNPKYEEV-----LGRKCYPSVLDIPDKIEVVDLFVKPKL---TM 88 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE-----TTEECBSSGGGCSSCCSEEEECSCHHH---HH
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHC--CCEEEEECCccccc-----CCCcccccccccCccceEEEEEeCHHH---HH
Confidence 368999994 68999999999999 99998876443222 344443221133457899988877542 12
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 024143 160 GDVRLAALSWNGEGSFLF 177 (272)
Q Consensus 160 ~~~~~l~~~~~gvkr~V~ 177 (272)
+.++.++ ..|++.+++
T Consensus 89 ~~~~e~~--~~g~k~v~~ 104 (139)
T d2d59a1 89 EYVEQAI--KKGAKVVWF 104 (139)
T ss_dssp HHHHHHH--HHTCSEEEE
T ss_pred HHHHHHH--HhCCCEEEE
Confidence 2333333 347776665
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=91.31 E-value=0.072 Score=40.37 Aligned_cols=66 Identities=21% Similarity=0.231 Sum_probs=40.1
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEe-cCCcch-----hhh---hhCCceeeccCc-cccCCCCEEEEecCC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHH-----DEL---INMGITPSLKWT-EATQKFPYVIFCAPP 152 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~-R~~~~~-----~~l---~~~~i~~~~~d~-~~~~~~D~Vi~~a~~ 152 (272)
.||.|.|+ |.+|+.|++.+.+. ++.++++.. |..... ..+ ...++... .+. ...+.+|+||....|
T Consensus 5 ikI~i~Ga~GrMG~~i~~~i~~~-~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~-~~~~~~~~~~DViIDFs~p 81 (162)
T d1diha1 5 IRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQ-SSLDAVKDDFDVFIDFTRP 81 (162)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEE-SCSTTTTTSCSEEEECSCH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecccchhccchhhhhhccccCCceee-ccHHHHhcccceEEEeccH
Confidence 58999997 99999999988876 377877554 432111 000 01111221 222 356789999877654
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.05 E-value=0.12 Score=42.34 Aligned_cols=31 Identities=19% Similarity=0.336 Sum_probs=28.5
Q ss_pred EEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 87 IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
|+|+|+|.-|-..+..|.++ |++|+++.++.
T Consensus 2 ViVIGaG~aGL~aA~~L~~~--G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGGGISGMAAAKLLHDS--GLNVVVLEARD 32 (383)
T ss_dssp EEEECCBHHHHHHHHHHHHT--TCCEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHhC--CCCEEEEecCC
Confidence 78999999999999999999 99999998643
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=90.77 E-value=0.1 Score=43.12 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=28.8
Q ss_pred eEEEEcCcHHHHHHHHHHH-----hcCCCCeEEEEecCCc
Q 024143 86 DLLIVGPGVLGRLVAEQWR-----QEHPGCQIYGQTMTAD 120 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~-----~~~~g~~V~~~~R~~~ 120 (272)
.|+|+|+|..|..++..|. ++ |++|+++.|.+.
T Consensus 9 DV~IvGaG~aGl~lA~~La~~~~~~~--G~~v~vlEr~~~ 46 (360)
T d1pn0a1 9 DVLIVGAGPAGLMAARVLSEYVRQKP--DLKVRIIDKRST 46 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHST--TCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhcccccC--CCcEEEEcCCCC
Confidence 5999999999999999995 46 999999998654
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=90.64 E-value=0.18 Score=40.24 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=28.8
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMT 118 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~ 118 (272)
..||+|+|+|-+|++++..|... |. +++.++.+
T Consensus 30 ~~~VliiG~GglGs~va~~La~~--Gvg~i~lvD~D 63 (247)
T d1jw9b_ 30 DSRVLIVGLGGLGCAASQYLASA--GVGNLTLLDFD 63 (247)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH--TCSEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHc--CCCeEEEECCc
Confidence 36899999999999999999999 87 77777654
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.57 E-value=0.25 Score=37.71 Aligned_cols=66 Identities=15% Similarity=0.150 Sum_probs=50.9
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcc-hhhhhhCCceeeccCccccCCCCEEEEecC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKWTEATQKFPYVIFCAP 151 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~-~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~ 151 (272)
..++|.|+|.|--|..=+.-|++. |.+|++--|...+ .+.-+..|.+....+ ++.+.+|+|..+.+
T Consensus 15 k~k~IaViGYGsQG~AhAlNLrDS--G~~V~VGLr~gs~s~~~A~~~Gf~v~~~~-eA~~~aDiim~L~P 81 (182)
T d1np3a2 15 QGKKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEAHGLKVADVK-TAVAAADVVMILTP 81 (182)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHTTCEEECHH-HHHHTCSEEEECSC
T ss_pred CCCEEEEEeeCcHhHHHHhhhhhc--CCCEEEEcCCCCccHHHHhhhccccccHH-HHhhhcCeeeeecc
Confidence 347999999999999999999999 9999987776443 233344577665433 67889999988876
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.47 E-value=0.12 Score=39.68 Aligned_cols=91 Identities=14% Similarity=0.187 Sum_probs=52.5
Q ss_pred CeEEEEcC-cHHHHHHHHHHHhcCCCCe-EEEEecCCcchhhhh-hCCceeec--cCcc--------ccCCCCEEEEecC
Q 024143 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELI-NMGITPSL--KWTE--------ATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGa-GfiG~~l~~~L~~~~~g~~-V~~~~R~~~~~~~l~-~~~i~~~~--~d~~--------~~~~~D~Vi~~a~ 151 (272)
.+|||.|+ |-+|+..++..... |.+ |+++++++++...+. ..+.+.+. .+.+ .-+++|+||.+.+
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~--Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~vG 109 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLL--GCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVG 109 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHT--TCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CEEEEECCCchhhHHHHHHHHHc--CCcceecccchHHHHhhhhhcccceEEeeccchhHHHHHHHHhccCceEEEecCC
Confidence 57999995 99999999888778 875 445566655544443 34544332 2211 2357999999987
Q ss_pred CCCCCChHHHHHHHHHHhcCCCeEEEEecceee
Q 024143 152 PSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIY 184 (272)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~~gvkr~V~~SS~~vY 184 (272)
. +.+...+.+...-.|++.++..+-|
T Consensus 110 g-------~~~~~~~~~l~~~G~iv~~G~~s~~ 135 (187)
T d1vj1a2 110 G-------DISNTVISQMNENSHIILCGQISQY 135 (187)
T ss_dssp H-------HHHHHHHTTEEEEEEEEEC------
T ss_pred c-------hhHHHHhhhccccccEEEecccccc
Confidence 2 1233333233334578777665544
|
| >d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=90.40 E-value=0.0068 Score=43.49 Aligned_cols=56 Identities=13% Similarity=0.095 Sum_probs=42.2
Q ss_pred ceeeecccCccccc----cccc-ccCCcchhhhcc-ccccccc--cccccceecccccccccccc
Q 024143 3 TISCTNTVSLNGAC----TRFF-AADSLSSKASSV-FFNNRTW--KLKLRPLVASSSSSSMATNF 59 (272)
Q Consensus 3 ~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 59 (272)
.||+..+ ++.... ++|| |+|.+|+++.+| .++++.| .++..-+|..+|...++..+
T Consensus 14 ~iv~~~l-~~~~~~i~~~~~~~~dlG~DSl~~~~l~~~le~~f~i~i~~~~~~~~~Tv~~l~~~l 77 (115)
T d1klpa_ 14 EIIEEVT-GIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYI 77 (115)
T ss_dssp HHHHHHT-CCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHH
T ss_pred HHHHHHH-CCCccccCcccchhhhcccchhHHHHHHHHHHHHHCCCCCHHHHHhCccHHHHHHHH
Confidence 4566665 344333 6887 799999999999 9999998 56667788888888877655
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=90.21 E-value=0.15 Score=38.11 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=29.0
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
|++|.|.|+ |-||....+-+.+.+..++|.+++-+
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~ 36 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG 36 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 789999997 99999999887765446899998754
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=90.20 E-value=0.15 Score=42.87 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=29.1
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
.|+|+|+|+-|..++.+|.++ |++|.++-+.
T Consensus 4 ~VIVVGsG~aG~v~A~rLaea--G~~VlvLEaG 34 (367)
T d1n4wa1 4 PAVVIGTGYGAAVSALRLGEA--GVQTLMLEMG 34 (367)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred eEEEeCcCHHHHHHHHHHHHC--cCeEEEEecC
Confidence 489999999999999999999 9999999885
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=90.19 E-value=0.17 Score=39.82 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=30.3
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCc
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~ 120 (272)
.|+|+|+|..|...+..|.++ |++|..+.+++.
T Consensus 4 DViIIGaG~aGl~aA~~la~~--G~~V~liEk~~~ 36 (251)
T d2i0za1 4 DVIVIGGGPSGLMAAIGAAEE--GANVLLLDKGNK 36 (251)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCC
Confidence 699999999999999999999 999999998654
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=89.54 E-value=0.45 Score=34.61 Aligned_cols=55 Identities=15% Similarity=0.149 Sum_probs=37.1
Q ss_pred eEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCccccCCCCEEEEecCCCC
Q 024143 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (272)
Q Consensus 86 ~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~~~~~~~D~Vi~~a~~~~ 154 (272)
||.|.|+ |.+|+.+++.+.+. +++++.+..-..+....+ ...++|+||....|..
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~-~~~~l~~~~d~~~~~~~~-------------~~~~~DvvIDFS~p~~ 56 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAA-DDLTLSAELDAGDPLSLL-------------TDGNTEVVIDFTHPDV 56 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-TTSEEEEEECTTCCTHHH-------------HTTTCSEEEECCCTTT
T ss_pred CEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCchhhh-------------ccccCCEEEEcccHHH
Confidence 6899997 99999999988765 378887643221211111 1246899998877653
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.31 E-value=0.53 Score=35.65 Aligned_cols=39 Identities=10% Similarity=0.193 Sum_probs=32.5
Q ss_pred cCCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcch
Q 024143 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (272)
Q Consensus 82 ~~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~~ 122 (272)
+..++|+|+|. ..+|+.|+..|.++ |..|+.........
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~--gatVt~~~~~t~~l 76 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWN--NATVTTCHSKTAHL 76 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTTCSSH
T ss_pred cccceEEEEecCCccchHHHHHHHhc--cCceEEEecccccH
Confidence 34589999996 78999999999999 99999887765443
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=89.06 E-value=0.26 Score=37.26 Aligned_cols=37 Identities=14% Similarity=0.267 Sum_probs=30.7
Q ss_pred CCCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCCcc
Q 024143 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (272)
Q Consensus 83 ~~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~~~ 121 (272)
..++|+|+|- ..+|+.|+..|.++ |..|+........
T Consensus 36 ~GK~v~VIGrS~~VG~Pla~lL~~~--gatVt~~h~~t~~ 73 (166)
T d1b0aa1 36 FGLNAVVIGASNIVGRPMSMELLLA--GCTTTVTHRFTKN 73 (166)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTT--TCEEEEECSSCSC
T ss_pred ccceEEEEeccccccHHHHHHHHHh--hccccccccccch
Confidence 4589999996 78999999999999 9999987665433
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=88.88 E-value=0.31 Score=36.82 Aligned_cols=70 Identities=13% Similarity=0.061 Sum_probs=41.0
Q ss_pred CeEEEEcCcHHH--HHHHHHHHhcCC--CCeEEEEecCCcc--hhhhh--------hCCce--eec-cCc-cccCCCCEE
Q 024143 85 NDLLIVGPGVLG--RLVAEQWRQEHP--GCQIYGQTMTADH--HDELI--------NMGIT--PSL-KWT-EATQKFPYV 146 (272)
Q Consensus 85 ~~IlItGaGfiG--~~l~~~L~~~~~--g~~V~~~~R~~~~--~~~l~--------~~~i~--~~~-~d~-~~~~~~D~V 146 (272)
+||.|+|+|-+| ..++..+...+. .-++..++.++++ .+.+. ..+.. ... .|. ++++++|+|
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDvV 81 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFV 81 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCEE
Confidence 689999998554 444444444311 1388888887654 22111 11222 111 232 468999999
Q ss_pred EEecCCCC
Q 024143 147 IFCAPPSR 154 (272)
Q Consensus 147 i~~a~~~~ 154 (272)
|.+++...
T Consensus 82 v~ta~~~~ 89 (169)
T d1s6ya1 82 TTQFRVGG 89 (169)
T ss_dssp EECCCTTH
T ss_pred EEccccCC
Confidence 99998754
|
| >d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.55 E-value=0.3 Score=37.97 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=27.4
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
+++|+|+|+.|-.++..|++..+..+|+.+++.
T Consensus 6 ~~vIvG~G~aG~~~A~~Lr~~~~~~~I~li~~e 38 (213)
T d1m6ia1 6 PFLLIGGGTAAFAAARSIRARDPGARVLIVSED 38 (213)
T ss_dssp EEEEESCSHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred CEEEECCcHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence 589999999999999999998334468888764
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=88.15 E-value=0.32 Score=39.09 Aligned_cols=34 Identities=21% Similarity=0.306 Sum_probs=30.2
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEec
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R 117 (272)
...++|+|=|.|.+|+++++.|.+. |.+|++++-
T Consensus 29 l~g~~v~IqGfGnVG~~~a~~L~~~--Gakvv~vsD 62 (242)
T d1v9la1 29 IEGKTVAIQGMGNVGRWTAYWLEKM--GAKVIAVSD 62 (242)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCeEEEeec
Confidence 3457999999999999999999999 999998764
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=88.06 E-value=0.42 Score=37.51 Aligned_cols=68 Identities=16% Similarity=0.100 Sum_probs=42.0
Q ss_pred CeEEEEcCcHHHH-HHHHHHHhcCCCCeEEEE-ecCCcchhhhhh-CCce---eec-cCc-ccc--CCCCEEEEecCCC
Q 024143 85 NDLLIVGPGVLGR-LVAEQWRQEHPGCQIYGQ-TMTADHHDELIN-MGIT---PSL-KWT-EAT--QKFPYVIFCAPPS 153 (272)
Q Consensus 85 ~~IlItGaGfiG~-~l~~~L~~~~~g~~V~~~-~R~~~~~~~l~~-~~i~---~~~-~d~-~~~--~~~D~Vi~~a~~~ 153 (272)
-+|.|+|+|.+|+ ++++.+.. .++.+|+++ +|++++.....+ .+++ ... .|. +.+ .++|+|+.+.++.
T Consensus 34 iriaiIG~G~~~~~~~~~~~~~-~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~ell~~~~iD~V~I~tp~~ 111 (221)
T d1h6da1 34 FGYAIVGLGKYALNQILPGFAG-CQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNS 111 (221)
T ss_dssp EEEEEECCSHHHHHTHHHHTTT-CSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGG
T ss_pred EEEEEEcCcHHHHHHHHHHHHh-CCCceEEEEecCCHHHHHHHHHhhccccccccccCchhhhcccccceeeeeccchh
Confidence 3799999999997 56666554 357888855 666666554332 2332 111 222 333 3789998877653
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=87.76 E-value=0.28 Score=39.01 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=31.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~ 121 (272)
..|+|+|+|.-|...+-.|.++ |++|.++.+.+..
T Consensus 5 ~DViIIGaG~aGl~aA~~la~~--G~~V~vlEk~~~~ 39 (253)
T d2gqfa1 5 SENIIIGAGAAGLFCAAQLAKL--GKSVTVFDNGKKI 39 (253)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHC--CCcEEEEecCCCC
Confidence 3699999999999999999999 9999999987643
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=87.59 E-value=0.24 Score=39.25 Aligned_cols=58 Identities=16% Similarity=0.082 Sum_probs=39.9
Q ss_pred CcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCceeeccCc---------cccCCCCEEEEecCCCC
Q 024143 92 PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---------EATQKFPYVIFCAPPSR 154 (272)
Q Consensus 92 aGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~~~~d~---------~~~~~~D~Vi~~a~~~~ 154 (272)
+|..|..|++++..+ |++|+.+........ ..++....... +.+.++|++|++|+..+
T Consensus 31 SGk~G~aiA~~~~~~--Ga~V~li~g~~~~~~---p~~~~~~~~~t~~~m~~~~~~~~~~~D~~i~aAAvsD 97 (223)
T d1u7za_ 31 SGKMGFAIAAAAARR--GANVTLVSGPVSLPT---PPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVAD 97 (223)
T ss_dssp CSHHHHHHHHHHHHT--TCEEEEEECSCCCCC---CTTEEEEECCSHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred cHHHHHHHHHHHHHc--CCchhhhhcccccCc---ccccccceehhhHHHHHHHHhhhccceeEeeeechhh
Confidence 399999999999999 999999876543211 12333322110 24578999999998654
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=87.43 E-value=0.22 Score=38.74 Aligned_cols=34 Identities=18% Similarity=0.129 Sum_probs=29.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCC-------CeEEEEecCCc
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPG-------CQIYGQTMTAD 120 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g-------~~V~~~~R~~~ 120 (272)
.||+|+|+|.-|-..+.+|.++ | ++|+++.+.+.
T Consensus 3 ~~VaVIGaGpaGL~aA~~L~~~--G~~~~~~~~~V~v~E~~~~ 43 (239)
T d1lqta2 3 YYIAIVGSGPSAFFAAASLLKA--ADTTEDLDMAVDMLEMLPT 43 (239)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--HHHSTTCCEEEEEEESSSS
T ss_pred cEEEEECcCHHHHHHHHHHHHc--CCccccCCCceEEEecCCC
Confidence 4899999999999999999998 7 57999988653
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=87.40 E-value=0.52 Score=39.77 Aligned_cols=67 Identities=15% Similarity=0.163 Sum_probs=49.4
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchhhhh----h-CCceeeccCc--cccCCCCEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N-MGITPSLKWT--EATQKFPYVIFCAP 151 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~----~-~~i~~~~~d~--~~~~~~D~Vi~~a~ 151 (272)
+++.|+|+|..+..-++.+.+..+=-+|++.+|++++.+.+. . .+++....+. +++.++|+|+-|-+
T Consensus 129 ~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Ta 202 (340)
T d1x7da_ 129 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTA 202 (340)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCC
T ss_pred ceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccc
Confidence 589999999999998888877654459999999987655432 2 3566554442 57889999886654
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=87.26 E-value=0.32 Score=37.45 Aligned_cols=31 Identities=16% Similarity=0.079 Sum_probs=28.7
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
.|+|+|+|+.|...+.++.+. |.+|..+.++
T Consensus 4 DvvVIG~G~aG~~aA~~a~~~--G~kV~iiE~~ 34 (217)
T d1gesa1 4 DYIAIGGGSGGIASINRAAMY--GQKCALIEAK 34 (217)
T ss_dssp EEEEECCSHHHHHHHHHHHTT--TCCEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCEEEEEecc
Confidence 489999999999999999999 9999999874
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=87.05 E-value=0.3 Score=39.80 Aligned_cols=32 Identities=22% Similarity=0.271 Sum_probs=29.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
.|+|+|+|..|...+..|.++ |.+|+++.+.+
T Consensus 18 DVlVIG~G~aGl~aA~~la~~--G~~V~lvEK~~ 49 (308)
T d1y0pa2 18 DVVVVGSGGAGFSAAISATDS--GAKVILIEKEP 49 (308)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCcEEEEecCC
Confidence 699999999999999999999 99999998754
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=86.96 E-value=0.44 Score=39.32 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=30.2
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEec
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R 117 (272)
+..++|.|-|.|.+|+++++.|.+. |.+|++++-
T Consensus 34 L~gktvaIqGfGnVG~~~A~~L~e~--Gakvv~vsD 67 (293)
T d1hwxa1 34 FGDKTFAVQGFGNVGLHSMRYLHRF--GAKCVAVGE 67 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEEc
Confidence 4457899999999999999999999 999998764
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=86.89 E-value=0.3 Score=40.88 Aligned_cols=31 Identities=26% Similarity=0.295 Sum_probs=28.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
.++|+|+|+-|..++.+|.+. |++|.++-+.
T Consensus 9 dvIVVGsG~aG~v~A~rLaea--G~~VlvLEaG 39 (370)
T d3coxa1 9 PALVIGSGYGGAVAALRLTQA--GIPTQIVEMG 39 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCeEEEEeCC
Confidence 589999999999999999999 9999999875
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.79 E-value=0.4 Score=37.25 Aligned_cols=33 Identities=21% Similarity=0.426 Sum_probs=29.0
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
|||++.|++..|..+.+.|+++ ||+|.++...+
T Consensus 1 MkI~~~G~~~~~~~~l~~L~~~--~~~i~~V~t~p 33 (203)
T d2bw0a2 1 MKIAVIGQSLFGQEVYCHLRKE--GHEVVGVFTVP 33 (203)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT--TCEEEEEEECC
T ss_pred CEEEEEcCCHHHHHHHHHHHHC--CCcEEEEEcCC
Confidence 6899999999999999999999 99999776433
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.77 E-value=0.53 Score=36.79 Aligned_cols=35 Identities=9% Similarity=0.056 Sum_probs=27.7
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcchh
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD 123 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~~~ 123 (272)
.+||..|||. |+ .+..|.++ |++|++++-++..++
T Consensus 47 ~rvLd~GCG~-G~-~a~~LA~~--G~~V~gvD~S~~ai~ 81 (229)
T d2bzga1 47 LRVFFPLCGK-AV-EMKWFADR--GHSVVGVEISELGIQ 81 (229)
T ss_dssp CEEEETTCTT-CT-HHHHHHHT--TCEEEEECSCHHHHH
T ss_pred CEEEEeCCCC-cH-HHHHHHhC--CCcEEEEeCCHHHHH
Confidence 5899999976 54 46667778 999999999876554
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=86.62 E-value=0.54 Score=38.70 Aligned_cols=45 Identities=20% Similarity=0.272 Sum_probs=31.0
Q ss_pred CeEEEE--cC-cHH--HHHHHHHHHhcCCCCeEEEEecCCcchhhhhhCCcee
Q 024143 85 NDLLIV--GP-GVL--GRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP 132 (272)
Q Consensus 85 ~~IlIt--Ga-Gfi--G~~l~~~L~~~~~g~~V~~~~R~~~~~~~l~~~~i~~ 132 (272)
|||||. |+ |-+ .-.|+++|.++ ||+|+.++ .++..+.+...|++.
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~--Gh~V~~~~-~~~~~~~v~~~g~~~ 50 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDL--GADVRMCA-PPDCAERLAEVGVPH 50 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHHTTCCE
T ss_pred CEEEEECCCChhHHHHHHHHHHHHHHC--CCEEEEEe-CcchHHHHHHcCCeE
Confidence 578887 55 655 45699999999 99999887 333334444455544
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.47 E-value=1.3 Score=39.43 Aligned_cols=32 Identities=6% Similarity=0.031 Sum_probs=27.9
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCC-eEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMT 118 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~-~V~~~~R~ 118 (272)
.+|+|+|+|-+|..+++.|.-. |. +++.++.+
T Consensus 26 s~VlvvG~gglG~Ei~knLvl~--GVg~itivD~d 58 (529)
T d1yova1 26 AHVCLINATATGTEILKNLVLP--GIGSFTIIDGN 58 (529)
T ss_dssp CEEEECCCSHHHHHHHHHHHTT--TCSEEEEECCS
T ss_pred CCEEEECCCHHHHHHHHHHHHh--cCCEEEEEcCC
Confidence 5899999999999999999988 86 77777654
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=86.37 E-value=0.36 Score=39.96 Aligned_cols=31 Identities=26% Similarity=0.398 Sum_probs=28.9
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
.++|+|+|.-|..++.+|.+. |++|.++-+.
T Consensus 6 DviIVGsG~aG~v~A~~La~~--G~kVlvLEaG 36 (379)
T d2f5va1 6 DVVIVGSGPIGCTYARELVGA--GYKVAMFDIG 36 (379)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSS
T ss_pred cEEEECcCHHHHHHHHHHhhC--CCeEEEEecC
Confidence 589999999999999999999 9999999875
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=85.98 E-value=0.29 Score=36.39 Aligned_cols=36 Identities=14% Similarity=0.262 Sum_probs=28.6
Q ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 84 ~~~IlItGa-GfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
|++|.|.|+ |-||....+-+.+.+..++|.+++-..
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~ 38 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR 38 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence 578999997 999999888776643368999987643
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=85.58 E-value=0.46 Score=36.40 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=29.4
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
.|+|+|+|..|...+..+.+. |.+|.++.+.+
T Consensus 5 DvvVIGgGpaGl~aA~~aa~~--G~kV~vie~~~ 36 (221)
T d1dxla1 5 DVVIIGGGPGGYVAAIKAAQL--GFKTTCIEKRG 36 (221)
T ss_dssp CEEEECCSHHHHHHHHHHHHH--TCCEEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCcEEEEEecC
Confidence 589999999999999999999 99999998754
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=85.44 E-value=0.44 Score=35.99 Aligned_cols=31 Identities=23% Similarity=0.194 Sum_probs=27.6
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEec
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R 117 (272)
+||.|=|.|.||+.+.|.|.++ +.+|+++.-
T Consensus 1 ikigINGfGRIGR~~~R~l~~~--~i~iv~INd 31 (168)
T d2g82a1 1 MKVGINGFGRIGRQVFRILHSR--GVEVALIND 31 (168)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEEC
T ss_pred CEEEEECCcHHHHHHHHHHhcC--CCEEEEECC
Confidence 4789999999999999999999 999988753
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=85.25 E-value=0.45 Score=38.30 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=29.1
Q ss_pred eEEEEcCcHHHHHHHHHHHh-cCCCCeEEEEecCCc
Q 024143 86 DLLIVGPGVLGRLVAEQWRQ-EHPGCQIYGQTMTAD 120 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~-~~~g~~V~~~~R~~~ 120 (272)
.|+|+|+|.-|-..+..|.+ . |++|.++.+.+.
T Consensus 35 DViVIGaGpaGL~aA~~LA~~~--G~~V~vlE~~~~ 68 (278)
T d1rp0a1 35 DVVVVGAGSAGLSAAYEISKNP--NVQVAIIEQSVS 68 (278)
T ss_dssp EEEEECCSHHHHHHHHHHHTST--TSCEEEEESSSS
T ss_pred CEEEECCCHHHHHHHHHHHHcc--CCeEEEEecCCC
Confidence 59999999999999999865 6 999999998653
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=84.21 E-value=0.63 Score=36.06 Aligned_cols=33 Identities=15% Similarity=0.088 Sum_probs=28.5
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
|||++.|.+-.|..+.+.|.+. |++|.++...+
T Consensus 1 Mkiv~~~~~~~g~~~l~~L~~~--g~~I~~Vvt~~ 33 (203)
T d2blna2 1 MKTVVFAYHDMGCLGIEALLAA--GYEISAIFTHT 33 (203)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT--TCEEEEEECCC
T ss_pred CeEEEEecCHHHHHHHHHHHHC--CCCEEEEEcCC
Confidence 6889999988999999999999 99998776443
|
| >d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class II ketol-acid reductoisomerase (KARI) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=83.98 E-value=0.58 Score=36.89 Aligned_cols=70 Identities=11% Similarity=0.061 Sum_probs=46.2
Q ss_pred CCCeEEEEcCcHHHHHHHHHHHhcC----CCCeEEEEecCC-cchhhhhhCCceeec---cC-ccccCCCCEEEEecCC
Q 024143 83 GENDLLIVGPGVLGRLVAEQWRQEH----PGCQIYGQTMTA-DHHDELINMGITPSL---KW-TEATQKFPYVIFCAPP 152 (272)
Q Consensus 83 ~~~~IlItGaGfiG~~l~~~L~~~~----~g~~V~~~~R~~-~~~~~l~~~~i~~~~---~d-~~~~~~~D~Vi~~a~~ 152 (272)
++++|.|+|.|--|.+=+.-|++.. .|..|++--|.. ...+.-+..|.+... .+ .++.+.+|+|..+.+.
T Consensus 43 g~KkIaViGYGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v~~~~v~~v~EAv~~ADiVmiLlPD 121 (226)
T d1qmga2 43 GIKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWETISGSDLVLLLISD 121 (226)
T ss_dssp TCSEEEEECCSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCGGGTCEEEHHHHHHTCSEEEECSCH
T ss_pred CCCEEEEEEeccHHHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHcCCccCCCcccCHHHHHhhCCEEEEecch
Confidence 4589999999999999999999950 045576555543 333333445654321 11 1577889999888764
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=83.64 E-value=0.64 Score=37.80 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=23.8
Q ss_pred CeEEEEcCc---HH--HHHHHHHHHhcCCCCeEEEEecC
Q 024143 85 NDLLIVGPG---VL--GRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 85 ~~IlItGaG---fi--G~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
|||+|+++| .+ ...|+++|.++ ||+|..++..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~--G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhC--CCEEEEEEeC
Confidence 589998544 33 34588999999 9999887654
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=83.32 E-value=1.1 Score=32.86 Aligned_cols=33 Identities=12% Similarity=0.153 Sum_probs=27.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHhcCCCCe-EEEEecC
Q 024143 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMT 118 (272)
Q Consensus 84 ~~~IlItGaGfiG~~l~~~L~~~~~g~~-V~~~~R~ 118 (272)
.++|+|+|.|..|...+..+++. |.+ |+.+.|.
T Consensus 45 ~~kVvVIGGGdtA~D~A~~a~r~--GA~~V~vi~rr 78 (153)
T d1gtea3 45 RGAVIVLGAGDTAFDCATSALRC--GARRVFLVFRK 78 (153)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT--TCSEEEEECSS
T ss_pred CCEEEEECCChhHHHHHHHHHHc--CCcceeEEEeC
Confidence 46899999999999999999998 875 6676664
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| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=83.25 E-value=0.54 Score=38.54 Aligned_cols=32 Identities=25% Similarity=0.358 Sum_probs=29.6
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
.|+|+|+|.-|...+..|.++ |++|+++.+.+
T Consensus 25 DVvVIG~G~aGl~aA~~la~~--G~~V~llEk~~ 56 (322)
T d1d4ca2 25 DVVIIGSGGAGLAAAVSARDA--GAKVILLEKEP 56 (322)
T ss_dssp SEEEECSSHHHHHHHHHHHTT--TCCEEEECSSS
T ss_pred eEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 699999999999999999999 99999998754
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| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=82.87 E-value=0.61 Score=35.88 Aligned_cols=32 Identities=28% Similarity=0.193 Sum_probs=29.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~ 118 (272)
..|+|+|+|..|...+..+.+. |.+|..+.+.
T Consensus 6 ~DlvVIG~GpaGl~aA~~aa~~--G~~V~liE~~ 37 (220)
T d1lvla1 6 TTLLIIGGGPGGYVAAIRAGQL--GIPTVLVEGQ 37 (220)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH--TCCEEEECSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC--CCcEEEEecC
Confidence 3699999999999999999999 9999998764
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| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=82.32 E-value=1 Score=34.44 Aligned_cols=38 Identities=16% Similarity=0.266 Sum_probs=33.0
Q ss_pred cCCCeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCCcc
Q 024143 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (272)
Q Consensus 82 ~~~~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~~~ 121 (272)
+..|+|+|+|+|.-|-.++.++.+. +.+++.+.|.+..
T Consensus 30 ~~gK~V~VvG~G~Sa~dia~~~~~~--~~~~~~~~~~~~~ 67 (235)
T d1w4xa2 30 FSGQRVGVIGTGSSGIQVSPQIAKQ--AAELFVFQRTPHF 67 (235)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHH--BSEEEEEESSCCC
T ss_pred CCCCEEEEECCCccHHHHHHHHHhh--hccccccccccce
Confidence 4558999999999999999999999 8998888886543
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| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=81.45 E-value=0.69 Score=37.89 Aligned_cols=32 Identities=19% Similarity=0.288 Sum_probs=29.5
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
.|+|+|+|..|...+..+.++ |.+|+++.+.+
T Consensus 21 DVvVIGaG~aGl~AA~~aa~~--G~~V~vlEK~~ 52 (317)
T d1qo8a2 21 QVLVVGAGSAGFNASLAAKKA--GANVILVDKAP 52 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHH--TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 699999999999999999999 99999998754
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| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=81.37 E-value=0.61 Score=35.28 Aligned_cols=33 Identities=18% Similarity=-0.021 Sum_probs=29.3
Q ss_pred CeEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 85 ~~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
++|+|+|+|..|..-+..|.+. |.+|+.+.+..
T Consensus 6 ~~VvIIGgGpaGl~aA~~~ar~--g~~v~vie~~~ 38 (192)
T d1vdca1 6 TRLCIVGSGPAAHTAAIYAARA--ELKPLLFEGWM 38 (192)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCCEEECCSS
T ss_pred ceEEEECCCHHHHHHHHHHHHc--CCcEEEEEeec
Confidence 5899999999999999999999 99999987643
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| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=81.33 E-value=1.1 Score=36.80 Aligned_cols=31 Identities=23% Similarity=0.147 Sum_probs=24.5
Q ss_pred CeEEEE--cC-cHH--HHHHHHHHHhcCCCCeEEEEec
Q 024143 85 NDLLIV--GP-GVL--GRLVAEQWRQEHPGCQIYGQTM 117 (272)
Q Consensus 85 ~~IlIt--Ga-Gfi--G~~l~~~L~~~~~g~~V~~~~R 117 (272)
|||||+ |+ |.| --.|+++|.++ ||+|+.++.
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~r--Gh~V~~~~~ 36 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLREL--GADARMCLP 36 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHC--CCEEEEEEC
Confidence 578886 56 655 35689999999 999998874
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| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=80.43 E-value=1 Score=34.46 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=29.2
Q ss_pred eEEEEcCcHHHHHHHHHHHhcCCCCeEEEEecCC
Q 024143 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (272)
Q Consensus 86 ~IlItGaGfiG~~l~~~L~~~~~g~~V~~~~R~~ 119 (272)
.|+|+|+|.-|...+..+.+. |.+|..+.+.+
T Consensus 7 DviVIG~GpAGl~aA~~aa~~--G~kV~lie~~~ 38 (233)
T d1v59a1 7 DVVIIGGGPAGYVAAIKAAQL--GFNTACVEKRG 38 (233)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCcEEEEEecC
Confidence 499999999999999999999 99999998754
|