Citrus Sinensis ID: 024179

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-
MEKGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWIKVHIVYARKTLISSCEIRVMYRIAGICCKRSPKVSHRELQENITAIGF
ccccEEEEEEEcccccccHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccEEcccccccccccEEEEccccccEEEEEEEcccEEcccEEEEcccccccHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccccEEEEEcccccccEEEEEEEcccccEEEEEEEcccccccccEEEEEEEEEccccccccccccHHHHHHHHHHccc
ccccEEEEEEEcccccccHHHHHHHHHHccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccHccEEEEEccccccEcccccccccccccEEEEEccccEEEEEEcccccEEEEEEEccccccccHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccEEEEEccccccccEEEEEEcccccEEEEEEEcccccccccEEEEEcHHHHHHHccccccccHHHHHHHHHEccc
MEKGVQRWVVdiskwdptphdfsfalyllpqrhhssiIKYVKLEDRKRALVSLLLQYALVHQvlgipfeeitinrtiegkpylesdkagmdfpnfnfnvshhgdyvaiaseplclvgldivsctiplretIPEFVQNFSSYFssfewdnilnagtsdeILIEFYRYWCLKEAYVKAIGIGVAygldkvefhhtgwgnisvkidgETMTEWKFWLFELGKRHWIKVHIVYARKTLISSCEIRVMYRIAGicckrspkvshrELQENITAIGF
MEKGVQRWVVdiskwdptpHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWIKVHIVYARKTLISSCEIRVMYRIAGIcckrspkvshrelqenitaigf
MEKGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWIKVHIVYARKTLISSCEIRVMYRIAGICCKRSPKVSHRELQENITAIGF
*****QRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWIKVHIVYARKTLISSCEIRVMYRIAGICCKR******************
**KGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWIKVHIVYARKTLISSCEIRVMYRIAGICCKRSPKVSHRELQENITAI**
MEKGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWIKVHIVYARKTLISSCEIRVMYRIAGICCKRSPKVSHRELQENITAIGF
**KGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWIKVHIVYARKTLISSCEIRVMYRIAGICCKRSPKVSHRELQENITAIGF
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEKGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWIKVHIVYARKTLISSCEIRVMYRIAGICCKRSPKVSHRELQENITAIGF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query271 2.2.26 [Sep-21-2011]
B2RYJ4309 L-aminoadipate-semialdehy yes no 0.675 0.592 0.375 2e-32
Q9CQF6309 L-aminoadipate-semialdehy yes no 0.675 0.592 0.375 8e-32
Q5NVE1309 L-aminoadipate-semialdehy yes no 0.667 0.585 0.381 6e-31
Q9NRN7309 L-aminoadipate-semialdehy yes no 0.675 0.592 0.369 7e-31
Q6DJH2302 L-aminoadipate-semialdehy N/A no 0.690 0.619 0.335 1e-28
Q10474258 L-aminoadipate-semialdehy yes no 0.645 0.678 0.298 2e-11
P55810233 4'-phosphopantetheinyl tr no no 0.520 0.605 0.281 7e-11
P40683237 4'-phosphopantetheinyl tr N/A no 0.516 0.590 0.293 1e-09
P50113272 L-aminoadipate-semialdehy yes no 0.638 0.636 0.3 7e-09
P39144224 4'-phosphopantetheinyl tr yes no 0.542 0.656 0.253 3e-08
>sp|B2RYJ4|ADPPT_RAT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Rattus norvegicus GN=Aasdhppt PE=2 SV=1 Back     alignment and function desciption
 Score =  139 bits (350), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 1/184 (0%)

Query: 7   RWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGI 66
           RW      W P+P ++  A+  +       I ++V   D K AL   L+   LV + L I
Sbjct: 18  RWAFSCGTWLPSPAEWLLAVRSIQPEEKERIGQFVFARDAKAALAGRLMIRKLVAEKLNI 77

Query: 67  PFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIP 126
           P++ I + RT +GKP L  D     +PNFNFN+SH GDY  +A+EP   VG+DI+  + P
Sbjct: 78  PWDHIRLQRTSKGKPILAKDTLN-PYPNFNFNISHQGDYTVLAAEPELQVGIDIMKTSFP 136

Query: 127 LRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLD 186
            R +IPEF       F++ EW+ I +       L  FYR+W LKE+++KAIG+G+ + + 
Sbjct: 137 GRGSIPEFFHIMKRKFTNKEWETIRSFNDEWSQLDMFYRHWALKESFIKAIGVGLGFEMQ 196

Query: 187 KVEF 190
           ++EF
Sbjct: 197 RLEF 200
Catalyzes the post-translational modification of target proteins by phosphopantetheine. Can transfer the 4'-phosphopantetheine moiety from coenzyme A to a serine residue of a broad range of acceptors, such as the acyl carrier domain of FASN.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 7EC: .EC: 8EC: .EC: -
>sp|Q9CQF6|ADPPT_MOUSE L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Mus musculus GN=Aasdhppt PE=2 SV=1 Back     alignment and function description
>sp|Q5NVE1|ADPPT_PONAB L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Pongo abelii GN=AASDHPPT PE=2 SV=1 Back     alignment and function description
>sp|Q9NRN7|ADPPT_HUMAN L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Homo sapiens GN=AASDHPPT PE=1 SV=2 Back     alignment and function description
>sp|Q6DJH2|ADPPT_XENLA L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Xenopus laevis GN=aasdhppt PE=2 SV=1 Back     alignment and function description
>sp|Q10474|LYS5_SCHPO L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lys7 PE=1 SV=1 Back     alignment and function description
>sp|P55810|PSF1_BACPU 4'-phosphopantetheinyl transferase psf-1 OS=Bacillus pumilus GN=psf-1 PE=1 SV=1 Back     alignment and function description
>sp|P40683|GSP_ANEMI 4'-phosphopantetheinyl transferase gsp OS=Aneurinibacillus migulanus GN=gsp PE=3 SV=2 Back     alignment and function description
>sp|P50113|LYS5_YEAST L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LYS5 PE=1 SV=1 Back     alignment and function description
>sp|P39144|LP14_BACIU 4'-phosphopantetheinyl transferase OS=Bacillus subtilis GN=lpa-14 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query271
224110170281 predicted protein [Populus trichocarpa] 0.830 0.800 0.724 1e-100
255568044 405 aminoadipate-semialdehyde dehydrogenase, 0.830 0.555 0.706 5e-95
225450250314 PREDICTED: L-aminoadipate-semialdehyde d 0.830 0.716 0.733 1e-94
296080991300 unnamed protein product [Vitis vinifera] 0.830 0.75 0.733 3e-94
356555754281 PREDICTED: L-aminoadipate-semialdehyde d 0.845 0.814 0.691 5e-90
356500323280 PREDICTED: L-aminoadipate-semialdehyde d 0.845 0.817 0.681 4e-89
449434500276 PREDICTED: L-aminoadipate-semialdehyde d 0.830 0.815 0.662 4e-85
413924804276 hypothetical protein ZEAMMB73_017831 [Ze 0.804 0.789 0.609 9e-75
413924805275 hypothetical protein ZEAMMB73_017831 [Ze 0.800 0.789 0.613 2e-74
115484057283 Os11g0136500 [Oryza sativa Japonica Grou 0.785 0.752 0.581 3e-72
>gi|224110170|ref|XP_002315436.1| predicted protein [Populus trichocarpa] gi|222864476|gb|EEF01607.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 163/225 (72%), Positives = 199/225 (88%)

Query: 1   MEKGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALV 60
           MEKGV+RW+VD SKW+PTPHDFS AL++LPQ   SSI +++++EDRK+ALVS LLQYAL+
Sbjct: 1   MEKGVKRWLVDTSKWNPTPHDFSSALFVLPQHERSSITRFLRMEDRKQALVSRLLQYALI 60

Query: 61  HQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDI 120
           H+VLGIP+ EI I RT EGKPYLE  K G++FPNFNFNVSHHGD+VAIASEPLCLVG+D+
Sbjct: 61  HEVLGIPYNEIVIKRTFEGKPYLECSKVGVEFPNFNFNVSHHGDHVAIASEPLCLVGVDV 120

Query: 121 VSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIG 180
           V C  P +E++PEF++NFSSYFSS EWDNI+N GTSDEIL++FYRYWCLKEA+VKA+G G
Sbjct: 121 VCCIKPEKESVPEFIENFSSYFSSLEWDNIINTGTSDEILVDFYRYWCLKEAFVKAVGSG 180

Query: 181 VAYGLDKVEFHHTGWGNISVKIDGETMTEWKFWLFELGKRHWIKV 225
           VAYG+DKVEFHHT W NISVK+DGE +TEW+FWLF+L +RHW+ V
Sbjct: 181 VAYGVDKVEFHHTNWTNISVKVDGEPLTEWRFWLFKLPERHWVAV 225

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255568044|ref|XP_002524999.1| aminoadipate-semialdehyde dehydrogenase, putative [Ricinus communis] gi|223535743|gb|EEF37406.1| aminoadipate-semialdehyde dehydrogenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225450250|ref|XP_002268769.1| PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Vitis vinifera] Back     alignment and taxonomy information
>gi|296080991|emb|CBI18589.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356555754|ref|XP_003546195.1| PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Glycine max] Back     alignment and taxonomy information
>gi|356500323|ref|XP_003518982.1| PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Glycine max] Back     alignment and taxonomy information
>gi|449434500|ref|XP_004135034.1| PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Cucumis sativus] gi|449512793|ref|XP_004164141.1| PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|413924804|gb|AFW64736.1| hypothetical protein ZEAMMB73_017831 [Zea mays] Back     alignment and taxonomy information
>gi|413924805|gb|AFW64737.1| hypothetical protein ZEAMMB73_017831 [Zea mays] Back     alignment and taxonomy information
>gi|115484057|ref|NP_001065690.1| Os11g0136500 [Oryza sativa Japonica Group] gi|113644394|dbj|BAF27535.1| Os11g0136500 [Oryza sativa Japonica Group] gi|222615477|gb|EEE51609.1| hypothetical protein OsJ_32874 [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query271
RGD|1311360309 Aasdhppt "aminoadipate-semiald 0.815 0.715 0.346 1.2e-33
MGI|MGI:1914868309 Aasdhppt "aminoadipate-semiald 0.822 0.721 0.343 2e-33
UNIPROTKB|Q5NVE1309 AASDHPPT "L-aminoadipate-semia 0.808 0.708 0.351 1.1e-32
UNIPROTKB|F1SV35306 AASDHPPT "Uncharacterized prot 0.822 0.728 0.343 1.8e-32
UNIPROTKB|Q9NRN7309 AASDHPPT "L-aminoadipate-semia 0.815 0.715 0.341 2.3e-32
UNIPROTKB|F1PHM4296 AASDHPPT "Uncharacterized prot 0.815 0.746 0.341 3.7e-32
UNIPROTKB|F1MS62309 AASDHPPT "Uncharacterized prot 0.815 0.715 0.341 2.6e-31
UNIPROTKB|F1P0E9306 AASDHPPT "Uncharacterized prot 0.808 0.715 0.324 6.9e-31
UNIPROTKB|G3MZI2308 G3MZI2 "Uncharacterized protei 0.815 0.717 0.341 6.9e-31
ZFIN|ZDB-GENE-050913-36293 aasdhppt "aminoadipate-semiald 0.856 0.791 0.325 9.1e-29
RGD|1311360 Aasdhppt "aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 80/231 (34%), Positives = 125/231 (54%)

Query:     3 KGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQ 62
             +GV RW      W P+P ++  A+  +       I ++V   D K AL   L+   LV +
Sbjct:    15 EGV-RWAFSCGTWLPSPAEWLLAVRSIQPEEKERIGQFVFARDAKAALAGRLMIRKLVAE 73

Query:    63 VLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVS 122
              L IP++ I + RT +GKP L  D     +PNFNFN+SH GDY  +A+EP   VG+DI+ 
Sbjct:    74 KLNIPWDHIRLQRTSKGKPILAKDTLN-PYPNFNFNISHQGDYTVLAAEPELQVGIDIMK 132

Query:   123 CTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVA 182
              + P R +IPEF       F++ EW+ I +       L  FYR+W LKE+++KAIG+G+ 
Sbjct:   133 TSFPGRGSIPEFFHIMKRKFTNKEWETIRSFNDEWSQLDMFYRHWALKESFIKAIGVGLG 192

Query:   183 YGLDKVEFHHTGW----GNISVK----IDGETMTEWKFWLFELGKRHWIKV 225
             + + ++EF  +      G +  +    +DGE   EW F   ++ + H++ V
Sbjct:   193 FEMQRLEFDVSPLSMDIGQVYKETRLILDGEEEKEWAFEESKIDQHHFVAV 243
GO:0000287 "magnesium ion binding" evidence=IEA;ISO;ISS
GO:0005737 "cytoplasm" evidence=IEA
GO:0008897 "holo-[acyl-carrier-protein
GO:0009059 "macromolecule biosynthetic process" evidence=IEA
MGI|MGI:1914868 Aasdhppt "aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q5NVE1 AASDHPPT "L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
UNIPROTKB|F1SV35 AASDHPPT "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NRN7 AASDHPPT "L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PHM4 AASDHPPT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1MS62 AASDHPPT "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1P0E9 AASDHPPT "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|G3MZI2 G3MZI2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050913-36 aasdhppt "aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.8LOW CONFIDENCE prediction!
4th Layer2.7.8.7LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_X002292
hypothetical protein (281 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pm.C_LG_X000827
dephospho-CoA kinase (EC-2.7.1.24) (232 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
COG2091223 COG2091, Sfp, Phosphopantetheinyl transferase [Coe 1e-23
pfam01648108 pfam01648, ACPS, 4'-phosphopantetheinyl transferas 1e-11
>gnl|CDD|225002 COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism] Back     alignment and domain information 
 Score = 95.1 bits (237), Expect = 1e-23
 Identities = 60/191 (31%), Positives = 77/191 (40%), Gaps = 21/191 (10%)

Query: 3   KGVQRWVVDISKWDPTPHDFSFALYLLPQRHHS---SIIKYVKLEDRKRALVSLLLQYAL 59
                +VV I        D       LP           +Y    DR+R L S LL  AL
Sbjct: 1   MMATVFVVGI------QSDRPLIERRLPSLLSEEARRGPRYRNKRDRERFLASRLLLRAL 54

Query: 60  VHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLD 119
           +   LG+  E + I+    GKPYL       D    +FN+SH GDYVA+A      +G+D
Sbjct: 55  LSIALGLDPELLQISYGERGKPYLP------DENLLDFNISHSGDYVAVALSKEGEIGVD 108

Query: 120 IVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGI 179
           I       R         F   F   E   +      D+    FYR W LKEA +KA G 
Sbjct: 109 IEKIR--PRAGWRSLAARFFHPFEPNELAWL----DKDQDNEAFYRLWTLKEAVLKATGK 162

Query: 180 GVAYGLDKVEF 190
           G+A GL  V+ 
Sbjct: 163 GLADGLSSVDL 173

Length = 223
>gnl|CDD|216625 pfam01648, ACPS, 4'-phosphopantetheinyl transferase superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 271
KOG0945289 consensus Alpha-aminoadipic semialdehyde dehydroge 100.0
COG2091223 Sfp Phosphopantetheinyl transferase [Coenzyme meta 100.0
PRK10351187 holo-(acyl carrier protein) synthase 2; Provisiona 100.0
PRK10251207 phosphopantetheinyltransferase component of entero 99.91
PRK14659122 acpS 4'-phosphopantetheinyl transferase; Provision 99.71
PF01648115 ACPS: 4'-phosphopantetheinyl transferase superfami 99.62
PRK14656126 acpS 4'-phosphopantetheinyl transferase; Provision 99.57
TIGR00556128 pantethn_trn phosphopantethiene--protein transfera 99.51
PRK14660125 acpS 4'-phosphopantetheinyl transferase; Provision 99.5
PRK14657123 acpS 4'-phosphopantetheinyl transferase; Provision 99.49
PRK14661169 acpS 4'-phosphopantetheinyl transferase; Provision 99.46
COG2977228 EntD Phosphopantetheinyl transferase component of 99.45
COG0736127 AcpS Phosphopantetheinyl transferase (holo-ACP syn 99.42
TIGR00516121 acpS holo-[acyl-carrier-protein] synthase. Formerl 99.42
PRK14658115 acpS 4'-phosphopantetheinyl transferase; Provision 99.42
PRK00070126 acpS 4'-phosphopantetheinyl transferase; Provision 99.4
PRK14663116 acpS 4'-phosphopantetheinyl transferase; Provision 99.29
PRK14662120 acpS 4'-phosphopantetheinyl transferase; Provision 99.29
PRK00070126 acpS 4'-phosphopantetheinyl transferase; Provision 99.05
PRK14658115 acpS 4'-phosphopantetheinyl transferase; Provision 98.99
COG0736127 AcpS Phosphopantetheinyl transferase (holo-ACP syn 98.7
PRK14659122 acpS 4'-phosphopantetheinyl transferase; Provision 98.66
TIGR00516121 acpS holo-[acyl-carrier-protein] synthase. Formerl 98.61
PRK14660125 acpS 4'-phosphopantetheinyl transferase; Provision 98.6
PRK14663116 acpS 4'-phosphopantetheinyl transferase; Provision 98.48
PRK14662120 acpS 4'-phosphopantetheinyl transferase; Provision 98.43
PRK14657123 acpS 4'-phosphopantetheinyl transferase; Provision 98.33
PRK14656126 acpS 4'-phosphopantetheinyl transferase; Provision 98.3
PRK14661169 acpS 4'-phosphopantetheinyl transferase; Provision 98.09
TIGR00556128 pantethn_trn phosphopantethiene--protein transfera 97.57
PF01648115 ACPS: 4'-phosphopantetheinyl transferase superfami 96.73
PF1398647 DUF4224: Domain of unknown function (DUF4224) 86.21
>KOG0945 consensus Alpha-aminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1e-40  Score=289.97  Aligned_cols=226  Identities=29%  Similarity=0.448  Sum_probs=193.5

Q ss_pred             eEEEEEECCCCCCChhcHHHHhcCCCHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCceeEccCCCCCcEEe
Q 024179            5 VQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLE   84 (271)
Q Consensus         5 v~vw~~~~~~~~~~~~~~~~~~~~L~~~E~~r~~r~~~~~dr~~~l~~R~llr~~l~~~~g~~~~~i~~~~~~~GKP~l~   84 (271)
                      .+.|.+...+|..+.+.+..+...|+++|++|+.+|++.+|++..|+||+|.|.+++.++|++|++++|.++.+|||++-
T Consensus        17 ~~~wAf~~~~~e~s~a~f~~a~~~ls~se~erI~qfr~~~DakaaL~grLl~R~~~a~~~~~~~n~l~f~rt~~GKP~l~   96 (289)
T KOG0945|consen   17 SLQWAFVVPDFEKSLALFRHAVQSLSPSEKERILQFRFDEDAKAALAGRLLVRHLVAIYLGVPWNELRFSRTEYGKPVLW   96 (289)
T ss_pred             hhhhheecchhhhhHHHHHHHHHhCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCChhHeEeecccCCCcchh
Confidence            45688888888777778999999999999999999999999999999999999999999999999999999999999665


Q ss_pred             cCCCCCCCCceeEEeccccCeEEEEecCCcccccccccccCcccCChhhHHHHHhccCCHHHHHHHHhcCCchHHHHHHH
Q 024179           85 SDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFY  164 (271)
Q Consensus        85 ~~~~~~~~~~~~fniSHs~~~v~~a~s~~~~vGIDIE~~~~~~~~~~~~~~~~~~~~fs~~E~~~l~~~~~~~~~~~~f~  164 (271)
                      +.......++++||+||.|+++++|.....+|||||++....  ....++.++++++||+.|++.+.+.+++..+...||
T Consensus        97 qn~~~p~~~~f~fNvSH~gd~iv~at~~~~~VGIDIm~~~~r--~~~~e~l~~~kr~fS~~E~k~l~s~~~e~~~~~~Fy  174 (289)
T KOG0945|consen   97 QNYSNPFSPTFGFNVSHQGDLIVVATTVHVPVGIDIMRPKER--KTAHEELELFKRVFSEDEWKMLKSAPDEEVQRTMFY  174 (289)
T ss_pred             hcccCCCCCCccceeeeeceEEEEeccCCcccceeeeecccc--cchHHHHHHHHHhcCHHHHHHHHcCCChhhHHHHHH
Confidence            433222357899999999999999999889999999998532  245788999999999999999998877788899999


Q ss_pred             HHHHHHHHHHhhhCcCCCCCCceEEEEeCCCC----Ce----EEEEcCcccccEEEEEEecCCCeEEEEEEecCcc
Q 024179          165 RYWCLKEAYVKAIGIGVAYGLDKVEFHHTGWG----NI----SVKIDGETMTEWKFWLFELGKRHWIKVHIVYARK  232 (271)
Q Consensus       165 ~~Wt~KEA~~Ka~G~GL~~~l~~~~~~~~~~~----~~----~l~~~g~~~~~w~~~~~~~~~~~~~Ava~~~~~~  232 (271)
                      ++||+||||+||+|.||..+|+.++|...+..    ..    ....+|....+|.+....+++.|.+|||......
T Consensus       175 rlWtLKEa~lKAtGvGl~~~L~~~~F~~~p~~~~~g~s~~~T~~~~~g~~~~qw~feE~~i~~~h~vav~~~k~d~  250 (289)
T KOG0945|consen  175 RLWTLKEAILKATGVGLNTDLSLLDFSANPFNTATGQSKVETLDEVDGIFQSQWNFEESFIDEAHSVAVCMEKSDS  250 (289)
T ss_pred             HHHHHHHHHHHHhcCCcccccccccccccccccccceeeeeeeeccCCccchhhhhhhhhccccceeEEeccCCCc
Confidence            99999999999999999999999988765421    11    1234666667899999999999999998755433

>COG2091 Sfp Phosphopantetheinyl transferase [Coenzyme metabolism] Back     alignment and domain information
>PRK10351 holo-(acyl carrier protein) synthase 2; Provisional Back     alignment and domain information
>PRK10251 phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex; Provisional Back     alignment and domain information
>PRK14659 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PF01648 ACPS: 4'-phosphopantetheinyl transferase superfamily; InterPro: IPR008278 These proteins transfer the 4'-phosphopantetheine (4'-PP) moiety from coenzyme A (CoA) to the invariant serine of pp-binding Back     alignment and domain information
>PRK14656 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>TIGR00556 pantethn_trn phosphopantethiene--protein transferase domain Back     alignment and domain information
>PRK14660 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14657 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14661 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>COG2977 EntD Phosphopantetheinyl transferase component of siderophore synthetase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG0736 AcpS Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism] Back     alignment and domain information
>TIGR00516 acpS holo-[acyl-carrier-protein] synthase Back     alignment and domain information
>PRK14658 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK00070 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14663 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14662 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK00070 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14658 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>COG0736 AcpS Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism] Back     alignment and domain information
>PRK14659 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>TIGR00516 acpS holo-[acyl-carrier-protein] synthase Back     alignment and domain information
>PRK14660 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14663 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14662 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14657 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14656 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>PRK14661 acpS 4'-phosphopantetheinyl transferase; Provisional Back     alignment and domain information
>TIGR00556 pantethn_trn phosphopantethiene--protein transferase domain Back     alignment and domain information
>PF01648 ACPS: 4'-phosphopantetheinyl transferase superfamily; InterPro: IPR008278 These proteins transfer the 4'-phosphopantetheine (4'-PP) moiety from coenzyme A (CoA) to the invariant serine of pp-binding Back     alignment and domain information
>PF13986 DUF4224: Domain of unknown function (DUF4224) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
2cg5_A319 Structure Of Aminoadipate-Semialdehyde Dehydrogenas 4e-32
2byd_A323 Structure Of Aminoadipate-semialdehyde Dehydrogenas 4e-32
1qr0_A228 Crystal Structure Of The 4'-Phosphopantetheinyl Tra 2e-09
>pdb|2CG5|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase- Phosphopantetheinyl Transferase In Complex With Cytosolic Acyl Carrier Protein And Coenzyme A Length = 319 Back     alignment and structure 
Iteration: 1

 Score =  134 bits (338), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 1/184 (0%)
Query: 7   RWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGI 66
           RW      W P+  ++  A+  +       I ++V   D K A+   L+   LV + L I
Sbjct: 28  RWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEKLNI 87
Query: 67  PFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIP 126
           P+  I + RT +GKP L  D +   +PNFNFN+SH GDY  +A+EP   VG+DI+  + P
Sbjct: 88  PWNHIRLQRTAKGKPVLAKDSSN-PYPNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFP 146
Query: 127 LRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLD 186
            R +IPEF       F++ EW+ I +       L  FYR W LKE+++KAIG+G+ + L 
Sbjct: 147 GRGSIPEFFHIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALKESFIKAIGVGLGFELQ 206
Query: 187 KVEF 190
           ++EF
Sbjct: 207 RLEF 210
>pdb|2BYD|A Chain A, Structure Of Aminoadipate-semialdehyde Dehydrogenase- Phosphopantetheinyl Transferase Length = 323 Back     alignment and structure
>pdb|1QR0|A Chain A, Crystal Structure Of The 4'-Phosphopantetheinyl Transferase Sfp- Coenzyme A Complex Length = 228 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
2c43_A323 Aminoadipate-semialdehyde dehydrogenase- phosphopa 9e-62
1qr0_A228 4'-phosphopantetheinyl transferase SFP; protein-co 2e-43
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A* Length = 323 Back     alignment and structure
 Score =  196 bits (500), Expect = 9e-62
 Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 9/225 (4%)

Query: 7   RWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGI 66
           RW      W P+  ++  A+  +       I ++V   D K A+   L+   LV + L I
Sbjct: 28  RWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEKLNI 87

Query: 67  PFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIP 126
           P+  I + RT +GKP L +  +   +PNFNFN+SH GDY  +A+EP   VG+DI+  + P
Sbjct: 88  PWNHIRLQRTAKGKPVL-AKDSSNPYPNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFP 146

Query: 127 LRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLD 186
            R +IPEF       F++ EW+ I +       L  FYR W LKE+++KAIG+G+ + L 
Sbjct: 147 GRGSIPEFFHIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALKESFIKAIGVGLGFELQ 206

Query: 187 KVEFHHT--------GWGNISVKIDGETMTEWKFWLFELGKRHWI 223
           ++EF  +         +    + +DGE   EW F   ++ + H++
Sbjct: 207 RLEFDLSPLNLDIGQVYKETRLFLDGEEEKEWAFEESKIDEHHFV 251
>1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1 Length = 228 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query271
2c43_A323 Aminoadipate-semialdehyde dehydrogenase- phosphopa 100.0
1qr0_A228 4'-phosphopantetheinyl transferase SFP; protein-co 100.0
3f09_A143 Holo-[acyl-carrier-protein] synthase; structural g 99.81
1fth_A122 ACPS, acyl carrier protein synthase; bacterial fat 99.76
1f7l_A121 Holo-(acyl carrier protein) synthase; 9-strand pse 99.69
3hyk_A122 Holo-[acyl-carrier-protein] synthase; structural g 99.67
2was_A122 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FA 99.66
3h88_A129 Holo-[acyl-carrier-protein] synthase; alpha-beta s 99.62
2wds_A143 Holo-[acyl-carrier-protein] synthase; phosphopante 99.55
2qg8_A163 Acyl carrier protein synthase PY06285; malaria, 3' 99.55
3gwm_A129 Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 99.54
2bdd_A182 ACP-synthase; structural genomics, structural geno 99.54
3ota_A129 Holo-[acyl-carrier-protein] synthase; structural g 99.47
3nfd_A153 Phosphopantetheine protein transferase, PPT1P; acy 99.46
1f7l_A121 Holo-(acyl carrier protein) synthase; 9-strand pse 99.24
3f09_A143 Holo-[acyl-carrier-protein] synthase; structural g 99.13
3hyk_A122 Holo-[acyl-carrier-protein] synthase; structural g 98.89
1fth_A122 ACPS, acyl carrier protein synthase; bacterial fat 98.8
3gwm_A129 Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 98.74
3h88_A129 Holo-[acyl-carrier-protein] synthase; alpha-beta s 98.72
2was_A122 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FA 98.72
3ota_A129 Holo-[acyl-carrier-protein] synthase; structural g 98.72
2uv9_A1878 Fatty acid synthase alpha subunits; fungal, dehydr 98.7
2qg8_A163 Acyl carrier protein synthase PY06285; malaria, 3' 98.55
3nfd_A153 Phosphopantetheine protein transferase, PPT1P; acy 98.48
2bdd_A182 ACP-synthase; structural genomics, structural geno 98.48
2uv8_A1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 98.44
2wds_A143 Holo-[acyl-carrier-protein] synthase; phosphopante 98.4
1qr0_A228 4'-phosphopantetheinyl transferase SFP; protein-co 97.57
2uv8_A1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 97.27
2uv9_A1878 Fatty acid synthase alpha subunits; fungal, dehydr 97.11
2c43_A 323 Aminoadipate-semialdehyde dehydrogenase- phosphopa 95.91
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-43  Score=325.02  Aligned_cols=231  Identities=33%  Similarity=0.628  Sum_probs=198.8

Q ss_pred             CCCCeEEEEEECCCCCCChhcHHHHhcCCCHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCceeEccCCCCC
Q 024179            1 MEKGVQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGK   80 (271)
Q Consensus         1 ~~~~v~vw~~~~~~~~~~~~~~~~~~~~L~~~E~~r~~r~~~~~dr~~~l~~R~llr~~l~~~~g~~~~~i~~~~~~~GK   80 (271)
                      |......|++|+..|.+++.++..+..+|+++|++++.+|+++++|.+||+||+++|.++++++|+++.+|.|.++++||
T Consensus        22 ~~~~~~rw~~~~~~W~~~~~~~~~~~~~Ls~~E~~r~~r~~~~~~r~~~LagR~l~r~al~~~lg~~~~~i~i~~~~~GK  101 (323)
T 2c43_A           22 GHMEGVRWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEKLNIPWNHIRLQRTAKGK  101 (323)
T ss_dssp             CCCCCEEEEECGGGCCCCHHHHHHHHHTSCHHHHHHHHTCSBHHHHHHHHHHHHHHHHHHHHHSCCCGGGCCEEECTTSC
T ss_pred             ccCCceEEEEEcCCCCCCHHHHHHHHccCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHCcCHHHeeEeeCCCCC
Confidence            67778899999999999998888999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEecCCCCCCCCceeEEeccccCeEEEEecCCcccccccccccCcccCChhhHHHHHhccCCHHHHHHHHhcCCchHHH
Q 024179           81 PYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEIL  160 (271)
Q Consensus        81 P~l~~~~~~~~~~~~~fniSHs~~~v~~a~s~~~~vGIDIE~~~~~~~~~~~~~~~~~~~~fs~~E~~~l~~~~~~~~~~  160 (271)
                      |++.+... ...++++||||||++++++|++...+||||||.+.+.....+.++.++++++||+.|++++....++.++.
T Consensus       102 P~l~~~~~-~~~~~~~fSISHs~~~av~avs~~~~VGIDIE~i~~~~~~~~~~~~~~~~r~ft~~E~~~l~~~~~~~~~~  180 (323)
T 2c43_A          102 PVLAKDSS-NPYPNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSFKDEWTQL  180 (323)
T ss_dssp             EEECCC---CCSSSCEEEEEEETTEEEEEEESSSEEEEEEEECCCCSSSCHHHHHHHTGGGSCHHHHHHHTTSSSHHHHH
T ss_pred             ceeeCCcc-CCCCCceEEEEEeCCceeeeecCCCCceeeeEEeechhhhhhhhHHHHHHHhCCHHHHHHHHcCCChhHHH
Confidence            99987310 01357999999999999999998789999999998642334566778899999999999997654444667


Q ss_pred             HHHHHHHHHHHHHHhhhCcCCCCCCceEEEEeC----CCCCe----EEEEcCcccccEEEEEEecCCCeEEEEEEecCcc
Q 024179          161 IEFYRYWCLKEAYVKAIGIGVAYGLDKVEFHHT----GWGNI----SVKIDGETMTEWKFWLFELGKRHWIKVHIVYARK  232 (271)
Q Consensus       161 ~~f~~~Wt~KEA~~Ka~G~GL~~~l~~~~~~~~----~~~~~----~l~~~g~~~~~w~~~~~~~~~~~~~Ava~~~~~~  232 (271)
                      ..|+++||+||||+||+|.||+.++++++|..+    +.+.+    .+.++|.....|++..+.++++|++|||+.....
T Consensus       181 ~~f~~~WtaKEA~~KA~G~Gl~~~l~~iev~~~p~~~~~g~p~~~~~v~l~g~~~~~w~~~~~~~~~~y~~Ava~~~~~~  260 (323)
T 2c43_A          181 DMFYRNWALKESFIKAIGVGLGFELQRLEFDLSPLNLDIGQVYKETRLFLDGEEEKEWAFEESKIDEHHFVAVALRKPDG  260 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCSCCCGGGEEEECCSSCCCTTCCBCCCEEEETTEECTTEEEEEEEEETTEEEEEEEECC--
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCeEEEEeCccccccCCceecceeeecCCCCCCeEEEEEecCCCcEEEEEEEcCCc
Confidence            899999999999999999999999999999876    22322    3567776667899999999999999999988653
>1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1 Back     alignment and structure
>1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A* Back     alignment and structure
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A* Back     alignment and structure
>3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, I diseases; HET: MSE A3P; 2.31A {Bacillus anthracis} SCOP: d.150.1.0 Back     alignment and structure
>2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B Back     alignment and structure
>2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A* Back     alignment and structure
>2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SG structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii} Back     alignment and structure
>3gwm_A Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 9-stand pseudo beta barrel protein, cytoplasm, fatty acid biosynthesis; 1.70A {Mycobacterium smegmatis} PDB: 3h7q_A* 3ne3_B 3ne1_A 3hqj_A* 4hc6_A Back     alignment and structure
>2bdd_A ACP-synthase; structural genomics, structural genomics conso SGC, transferase; 2.28A {Plasmodium yoelii yoelii} Back     alignment and structure
>3nfd_A Phosphopantetheine protein transferase, PPT1P; acyl carrier protein synthase, mycobacterium tuberculosis, A carrier protein; HET: COA; 1.89A {Corynebacterium ammoniagenes} PDB: 3ne9_A* Back     alignment and structure
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A* Back     alignment and structure
>3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, I diseases; HET: MSE A3P; 2.31A {Bacillus anthracis} SCOP: d.150.1.0 Back     alignment and structure
>1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A* Back     alignment and structure
>3gwm_A Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 9-stand pseudo beta barrel protein, cytoplasm, fatty acid biosynthesis; 1.70A {Mycobacterium smegmatis} PDB: 3h7q_A* 3ne3_B 3ne1_A 3hqj_A* 4hc6_A Back     alignment and structure
>2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SG structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii} Back     alignment and structure
>3nfd_A Phosphopantetheine protein transferase, PPT1P; acyl carrier protein synthase, mycobacterium tuberculosis, A carrier protein; HET: COA; 1.89A {Corynebacterium ammoniagenes} PDB: 3ne9_A* Back     alignment and structure
>2bdd_A ACP-synthase; structural genomics, structural genomics conso SGC, transferase; 2.28A {Plasmodium yoelii yoelii} Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A* Back     alignment and structure
>1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1 Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 271
d1qr0a1101 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transfe 2e-16
d1qr0a2127 d.150.1.1 (A:102-228) 4'-Phosphopantetheinyl trans 9e-14
>d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} Length = 101 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: 4'-phosphopantetheinyl transferase
superfamily: 4'-phosphopantetheinyl transferase
family: 4'-Phosphopantetheinyl transferase SFP
domain: 4'-Phosphopantetheinyl transferase SFP
species: Bacillus subtilis [TaxId: 1423]

 Score = 71.1 bits (174), Expect = 2e-16
 Identities = 17/102 (16%), Positives = 41/102 (40%), Gaps = 7/102 (6%)

Query: 8   WVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIP 67
           + + + +   +  +    +  +         ++   ED  R L+  +L  +++ +   + 
Sbjct: 4   YGIYMDR-PLSQEENERFMTFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQYQLD 62

Query: 68  FEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIA 109
             +I  +    GKP +         P+ +FN+SH G +V  A
Sbjct: 63  KSDIRFSTQEYGKPCIPDL------PDAHFNISHSGRWVIGA 98
>d1qr0a2 d.150.1.1 (A:102-228) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} Length = 127 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query271
d1qr0a1101 4'-Phosphopantetheinyl transferase SFP {Bacillus s 99.93
d1qr0a2127 4'-Phosphopantetheinyl transferase SFP {Bacillus s 99.92
d1ftha_117 Holo-(acyl carrier protein) synthase ACPS {Strepto 99.57
d1f7la_118 Holo-(acyl carrier protein) synthase ACPS {Bacillu 99.51
d1ftha_117 Holo-(acyl carrier protein) synthase ACPS {Strepto 98.96
d1f7la_118 Holo-(acyl carrier protein) synthase ACPS {Bacillu 98.81
d1qr0a2127 4'-Phosphopantetheinyl transferase SFP {Bacillus s 96.18
d1qr0a1101 4'-Phosphopantetheinyl transferase SFP {Bacillus s 86.42
>d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: 4'-phosphopantetheinyl transferase
superfamily: 4'-phosphopantetheinyl transferase
family: 4'-Phosphopantetheinyl transferase SFP
domain: 4'-Phosphopantetheinyl transferase SFP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.93  E-value=5.1e-26  Score=172.72  Aligned_cols=101  Identities=17%  Similarity=0.312  Sum_probs=94.4

Q ss_pred             eEEEEEECCCCCCChhcHHHHhcCCCHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCceeEccCCCCCcEEe
Q 024179            5 VQRWVVDISKWDPTPHDFSFALYLLPQRHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLE   84 (271)
Q Consensus         5 v~vw~~~~~~~~~~~~~~~~~~~~L~~~E~~r~~r~~~~~dr~~~l~~R~llr~~l~~~~g~~~~~i~~~~~~~GKP~l~   84 (271)
                      +.||++.++.- .+..+++.++++|+++|++|+.+|++++||+++++||+|+|+++++++|++|.+|.|.++++|||++.
T Consensus         1 ~~i~~i~~~~~-~~~~~~~~~~~~Ls~~e~~r~~r~~~~~dr~~~l~~r~llr~~l~~~~~~~p~~i~~~~~~~GKP~l~   79 (101)
T d1qr0a1           1 MKIYGIYMDRP-LSQEENERFMTFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQYQLDKSDIRFSTQEYGKPCIP   79 (101)
T ss_dssp             CEEEEEECSSC-CCHHHHHHHHTTSCHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCEECTTSCEECT
T ss_pred             CEEEEEeCCCC-CCHHHHHHHHHHCCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHhCCCccceeEEeCCCCCcccc
Confidence            57999999974 46888999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             cCCCCCCCCceeEEeccccCeEEEEecC
Q 024179           85 SDKAGMDFPNFNFNVSHHGDYVAIASEP  112 (271)
Q Consensus        85 ~~~~~~~~~~~~fniSHs~~~v~~a~s~  112 (271)
                      +      .++++|||||||+||+||+++
T Consensus        80 ~------~~~i~FNiSHsg~~vv~avss  101 (101)
T d1qr0a1          80 D------LPDAHFNISHSGRWVIGAFDS  101 (101)
T ss_dssp             T------CTTCEEEEEEETTEEEEEEES
T ss_pred             C------CCCcEEEecccCCeEEEEEeC
Confidence            6      367999999999999999974
>d1qr0a2 d.150.1.1 (A:102-228) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ftha_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1f7la_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ftha_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1f7la_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1qr0a2 d.150.1.1 (A:102-228) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure