Citrus Sinensis ID: 024275


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
MATDASPKYRTPDFHPEISVNPSKTKETTIHDGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHATAGAAAGALAATLTTPLDVVKTQLQCQVRTVSNVNFCQF
ccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcEEEccHHHHHHHHHccccccccHHHHHHHHHHHHcHHHHcccHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccc
ccccHHHHcccHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccHHHHHHHHHHHcccHEEEccccHHHHHHccHHHEHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccc
matdaspkyrtpdfhpeisvnpsktkettihDGLEFWQFMISGSIagsvehmamypvdtlKTRMQVigasrplhpagVRQAFSSVLklegpagfyRGIAAMGLGAGPAHAVYFSVYELCKEFfsggvpnnsmaHAVSGVFSTvasdavitpMDMVKQRLqlksspykgvADCVKRVLVEEGIGAFYASYRTtvimnapfqavHFATYEAVKRALMefdpnsgsdeslVVHATAGAAAGALAATLTTPLDVVKTQLQCQVRTVSNVNFCQF
matdaspkyrtpdfhpeisvnpsktKETTIHDGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLqlksspykgvADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHATAGAAAGALAATLTTPLDVVKTQLQCQVRTVSNVNFCQF
MATDASPKYRTPDFHPEISVNPSKTKETTIHDGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHatagaaagalaatlttPLDVVKTQLQCQVRTVSNVNFCQF
****************************TIHDGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFD*******SLVVHATAGAAAGALAATLTTPLDVVKTQLQCQVRTVSNVNFC**
*********RTPDFHPEI***************LEFWQFMISGSIAGSVEHMAMYPVDTLKTRM***************QAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRAL***********SLVVHATAGAAAGALAATLTTPLDVVKTQLQCQVRTVS*VNFCQF
**********TPDFHPEISVNPSKTKETTIHDGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHATAGAAAGALAATLTTPLDVVKTQLQCQVRTVSNVNFCQF
MATDASPKYRTPDFHPEISVNPSKTK**TIHDGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHATAGAAAGALAATLTTPLDVVKTQLQCQVR**********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATDASPKYRTPDFHPEISVNPSKTKETTIHDGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHATAGAAAGALAATLTTPLDVVKTQLQCQVRTVSNVNFCQF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query270 2.2.26 [Sep-21-2011]
Q55DY8308 Mitoferrin OS=Dictyosteli yes no 0.825 0.724 0.424 1e-44
O14281303 Uncharacterized mitochond yes no 0.8 0.712 0.413 2e-41
Q96A46364 Mitoferrin-2 OS=Homo sapi yes no 0.874 0.648 0.404 8e-41
Q8R0Z5364 Mitoferrin-2 OS=Mus muscu yes no 0.914 0.678 0.396 9e-41
Q287T7332 Mitoferrin-1 OS=Danio rer yes no 0.792 0.644 0.441 1e-39
Q9VAY3 379 Mitoferrin OS=Drosophila yes no 0.785 0.559 0.415 2e-39
P10566314 Mitochondrial RNA-splicin yes no 0.774 0.665 0.390 4e-39
P23500304 Mitochondrial RNA-splicin no no 0.774 0.687 0.392 5e-39
Q7T292376 Mitoferrin-2 OS=Danio rer no no 0.781 0.561 0.408 3e-38
Q9NYZ2338 Mitoferrin-1 OS=Homo sapi no no 0.774 0.618 0.405 1e-37
>sp|Q55DY8|MFRN_DICDI Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=3 SV=1 Back     alignment and function desciption
 Score =  179 bits (455), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/233 (42%), Positives = 147/233 (63%), Gaps = 10/233 (4%)

Query: 32  DGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVI--GASRPLHPAGVRQAFSSVLKLE 89
           +G  F+  +I+G+ AG  EH  MYP+DT+KT +Q I  GA +        Q    +++  
Sbjct: 12  EGGSFYVHLIAGAAAGFAEHCGMYPIDTIKTHIQAIKPGAMQ----TSSLQITKHIIQQH 67

Query: 90  GPAGFYRGIAAMGLGAGPAHAVYFSVYELCK-EFFSGGVPNNSMAHAVSGVFSTVASDAV 148
           G  G +RG+ A+  GA P+HAV+FS+YEL K +F      ++ +   ++G  +T+ S+AV
Sbjct: 68  GITGLFRGLTAVAAGAAPSHAVHFSIYELLKFKFIGSDEDHHPIKVGIAGAIATMTSEAV 127

Query: 149 ITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYE 208
            +PMD+VKQRLQL+ + YKG+ DC KR+ V+EGI  FY+ Y TT++MN P+  V+FA+YE
Sbjct: 128 ASPMDVVKQRLQLQITDYKGLTDCTKRIWVKEGIRGFYSGYTTTLVMNVPYNIVYFASYE 187

Query: 209 AVKRALMEFDPNSGSDE---SLVVHATAGAAAGALAATLTTPLDVVKTQLQCQ 258
           ++K+ +  +  N   +E    L+ H  AG  AG LAA  T P DVVKT+LQ Q
Sbjct: 188 SLKKIIQPWFNNKNPEERSYQLIDHLVAGGGAGMLAAAFTNPFDVVKTRLQTQ 240




Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane. Mitochondrial iron transporter that mediates iron uptake. Probably required for heme synthesis of hemoproteins and Fe-S cluster assembly.
Dictyostelium discoideum (taxid: 44689)
>sp|O14281|YETC_SCHPO Uncharacterized mitochondrial carrier C8C9.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC8C9.12c PE=3 SV=1 Back     alignment and function description
>sp|Q96A46|MFRN2_HUMAN Mitoferrin-2 OS=Homo sapiens GN=SLC25A28 PE=2 SV=1 Back     alignment and function description
>sp|Q8R0Z5|MFRN2_MOUSE Mitoferrin-2 OS=Mus musculus GN=Slc25a28 PE=2 SV=1 Back     alignment and function description
>sp|Q287T7|MFRN1_DANRE Mitoferrin-1 OS=Danio rerio GN=slc25a37 PE=1 SV=1 Back     alignment and function description
>sp|Q9VAY3|MFRN_DROME Mitoferrin OS=Drosophila melanogaster GN=mfrn PE=2 SV=1 Back     alignment and function description
>sp|P10566|MRS3_YEAST Mitochondrial RNA-splicing protein MRS3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRS3 PE=1 SV=4 Back     alignment and function description
>sp|P23500|MRS4_YEAST Mitochondrial RNA-splicing protein MRS4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRS4 PE=1 SV=1 Back     alignment and function description
>sp|Q7T292|MFRN2_DANRE Mitoferrin-2 OS=Danio rerio GN=slc25a28 PE=2 SV=1 Back     alignment and function description
>sp|Q9NYZ2|MFRN1_HUMAN Mitoferrin-1 OS=Homo sapiens GN=SLC25A37 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query270
147841926263 hypothetical protein VITISV_043146 [Viti 0.929 0.954 0.782 1e-106
359481209265 PREDICTED: mitoferrin-like isoform 2 [Vi 0.929 0.947 0.778 1e-106
225439526327 PREDICTED: mitoferrin-like isoform 1 [Vi 0.922 0.761 0.784 1e-105
224139256329 predicted protein [Populus trichocarpa] 0.937 0.768 0.756 1e-101
255571447323 mitochondrial carrier protein, putative 0.925 0.773 0.753 5e-98
255550607326 mitochondrial carrier protein, putative 0.922 0.763 0.712 5e-96
449450840331 PREDICTED: mitoferrin-like [Cucumis sati 0.922 0.752 0.7 2e-95
359478542327 PREDICTED: mitoferrin-like [Vitis vinife 0.922 0.761 0.701 1e-93
449461753311 PREDICTED: mitoferrin-like [Cucumis sati 0.907 0.787 0.717 4e-92
356553114324 PREDICTED: mitochondrial RNA-splicing pr 0.937 0.780 0.701 6e-92
>gi|147841926|emb|CAN63136.1| hypothetical protein VITISV_043146 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/262 (78%), Positives = 222/262 (84%), Gaps = 11/262 (4%)

Query: 3   TDASPKYR----TPDFHPEISVNPSKTKETTIHDGLEFWQFMISGSIAGSVEHMAMYPVD 58
           TDASPK+R      D+ PEI+VN S       HDGLEFWQFMI+GSIAGSVEHMAM+PVD
Sbjct: 6   TDASPKFRHVPQPSDYRPEITVNSS-------HDGLEFWQFMIAGSIAGSVEHMAMFPVD 58

Query: 59  TLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYEL 118
           TLKTRMQVIG S P    G+RQ   S+LK+EGPAG YRGIAAMGLGAGP+HAVYFSVYEL
Sbjct: 59  TLKTRMQVIGGSYPAPSIGLRQVLGSILKMEGPAGLYRGIAAMGLGAGPSHAVYFSVYEL 118

Query: 119 CKEFFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLV 178
           CK+FFS G PNNS AHAVSGVF+TVASDAVITPMDMVKQRLQLKSSPYKGV DCVKRVL+
Sbjct: 119 CKDFFSAGNPNNSAAHAVSGVFATVASDAVITPMDMVKQRLQLKSSPYKGVMDCVKRVLM 178

Query: 179 EEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHATAGAAAG 238
           EEGI AFYASYRTTV+MNAPF AVHFATYEA KR LME  P +  DE+LVVHATAGA AG
Sbjct: 179 EEGIQAFYASYRTTVVMNAPFTAVHFATYEAAKRGLMEVSPENADDENLVVHATAGAVAG 238

Query: 239 ALAATLTTPLDVVKTQLQCQVR 260
           ALAA +TTPLDVVKTQLQCQV+
Sbjct: 239 ALAAAVTTPLDVVKTQLQCQVK 260




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481209|ref|XP_003632593.1| PREDICTED: mitoferrin-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225439526|ref|XP_002262844.1| PREDICTED: mitoferrin-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224139256|ref|XP_002323023.1| predicted protein [Populus trichocarpa] gi|222867653|gb|EEF04784.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255571447|ref|XP_002526671.1| mitochondrial carrier protein, putative [Ricinus communis] gi|223533971|gb|EEF35693.1| mitochondrial carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255550607|ref|XP_002516353.1| mitochondrial carrier protein, putative [Ricinus communis] gi|223544519|gb|EEF46037.1| mitochondrial carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449450840|ref|XP_004143170.1| PREDICTED: mitoferrin-like [Cucumis sativus] gi|449505169|ref|XP_004162396.1| PREDICTED: mitoferrin-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359478542|ref|XP_003632130.1| PREDICTED: mitoferrin-like [Vitis vinifera] gi|297745824|emb|CBI15880.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449461753|ref|XP_004148606.1| PREDICTED: mitoferrin-like [Cucumis sativus] gi|449526567|ref|XP_004170285.1| PREDICTED: mitoferrin-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356553114|ref|XP_003544903.1| PREDICTED: mitochondrial RNA-splicing protein MRS3-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query270
TAIR|locus:2007387326 AT1G07030 [Arabidopsis thalian 0.944 0.782 0.632 5e-83
TAIR|locus:2060811331 AT2G30160 [Arabidopsis thalian 0.918 0.749 0.603 7.9e-78
DICTYBASE|DDB_G0269470308 mcfF "putative mitoferrin" [Di 0.833 0.730 0.385 1.2e-42
UNIPROTKB|E1BJE6364 SLC25A28 "Uncharacterized prot 0.911 0.675 0.372 1.3e-38
MGI|MGI:2180509364 Slc25a28 "solute carrier famil 0.918 0.681 0.361 2.6e-38
UNIPROTKB|E2R570364 SLC25A28 "Uncharacterized prot 0.911 0.675 0.368 3.4e-38
UNIPROTKB|F1S8W4364 SLC25A28 "Uncharacterized prot 0.911 0.675 0.368 3.4e-38
UNIPROTKB|Q96A46364 SLC25A28 "Mitoferrin-2" [Homo 0.881 0.653 0.372 8.9e-38
UNIPROTKB|F1NS09325 SLC25A37 "Uncharacterized prot 0.888 0.738 0.379 1.1e-37
ZFIN|ZDB-GENE-031118-202332 slc25a37 "solute carrier famil 0.792 0.644 0.400 3e-37
TAIR|locus:2007387 AT1G07030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
 Identities = 165/261 (63%), Positives = 195/261 (74%)

Query:     1 MATDAS--PKYRTPDFHPEISVNPSKTKETTIHDGLEFWQFMISGSIAGSVEHMAMYPVD 58
             MAT+A+  PK++ PD   ++S  P    E   HDGL+FWQFMI+GSIAGSVEHMAM+PVD
Sbjct:     1 MATEATTVPKFQEPDLR-QVSQTPDFKPEIA-HDGLKFWQFMIAGSIAGSVEHMAMFPVD 58

Query:    59 TLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYEL 118
             T+KT MQ +    PL P G+R+AF S+++ EGP+  YRGI AMGLGAGPAHAVYFS YE+
Sbjct:    59 TIKTHMQALRPC-PLKPVGIREAFRSIIQKEGPSALYRGIWAMGLGAGPAHAVYFSFYEV 117

Query:   119 CKEFFSGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLV 178
              K++ S G  NNS+AHA+SGVF+T++SDAV TPMDMVKQRLQ+    YKGV DCVKRVL 
Sbjct:   118 SKKYLSAGDQNNSVAHAMSGVFATISSDAVFTPMDMVKQRLQMGEGTYKGVWDCVKRVLR 177

Query:   179 EEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDES-LVVHXXXXXXX 237
             EEGIGAFYASYRTTV+MNAPF AVHFATYEA K+ LMEF P+  SDE   +VH       
Sbjct:   178 EEGIGAFYASYRTTVLMNAPFTAVHFATYEAAKKGLMEFSPDRISDEEGWLVHATAGAAA 237

Query:   238 XXXXXXXXXPLDVVKTQLQCQ 258
                      PLDVVKTQLQCQ
Sbjct:   238 GGLAAAVTTPLDVVKTQLQCQ 258


GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0015824 "proline transport" evidence=RCA
TAIR|locus:2060811 AT2G30160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269470 mcfF "putative mitoferrin" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|E1BJE6 SLC25A28 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2180509 Slc25a28 "solute carrier family 25, member 28" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2R570 SLC25A28 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1S8W4 SLC25A28 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q96A46 SLC25A28 "Mitoferrin-2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NS09 SLC25A37 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-031118-202 slc25a37 "solute carrier family 25, member 37" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query270
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-27
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-23
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 1e-18
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-12
PTZ00169 300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 4e-11
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 6e-08
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score =  100 bits (252), Expect = 3e-27
 Identities = 31/94 (32%), Positives = 45/94 (47%)

Query: 32  DGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGP 91
             L F   +++G IAG++     YP+D +KTR+Q   A       G+   F  + K EG 
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGI 60

Query: 92  AGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSG 125
            G Y+G+    L   PA A+YF  YE  K+    
Sbjct: 61  RGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLK 94


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 270
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.98
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.97
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.96
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.96
KOG0765333 consensus Predicted mitochondrial carrier protein 99.96
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.95
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.95
KOG0766297 consensus Predicted mitochondrial carrier protein 99.95
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.95
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.95
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.94
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.94
KOG0770353 consensus Predicted mitochondrial carrier protein 99.94
KOG0036463 consensus Predicted mitochondrial carrier protein 99.94
KOG0769308 consensus Predicted mitochondrial carrier protein 99.9
KOG2745321 consensus Mitochondrial carrier protein [General f 99.84
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.84
KOG1519297 consensus Predicted mitochondrial carrier protein 99.79
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.78
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.74
KOG2954427 consensus Mitochondrial carrier protein [General f 99.68
KOG1519297 consensus Predicted mitochondrial carrier protein 99.66
KOG2745321 consensus Mitochondrial carrier protein [General f 99.34
KOG2954427 consensus Mitochondrial carrier protein [General f 98.55
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=3.5e-49  Score=328.32  Aligned_cols=227  Identities=28%  Similarity=0.454  Sum_probs=204.1

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhchHHHHHHHHHhcCCC-CCCCCCcHHHHHHHHHhhhCccccccchhhhhhchhhhhhHH
Q 024275           34 LEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGAS-RPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVY  112 (270)
Q Consensus        34 ~~~~~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~-~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~  112 (270)
                      ...++.+++|++||+++..++.|||++|+|+|++.+. ...++.++.+.+++|+++||++|||||..+++++.+|+.+++
T Consensus        25 ~~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avq  104 (320)
T KOG0752|consen   25 ITGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEPSKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQ  104 (320)
T ss_pred             HHHHHHHhcchHHHHHHHHhcCchhHceEEEEeccccccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecchhh
Confidence            3778999999999999999999999999999999864 345678899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCC---CCCchHHHHHHHHHHHHhhhhhcccHHHHHHHHhcCCC--CCCCHHHHHHHHHHhhChhhhcc
Q 024275          113 FSVYELCKEFFSGG---VPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSS--PYKGVADCVKRVLVEEGIGAFYA  187 (270)
Q Consensus       113 ~~~~~~~~~~~~~~---~~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~r~q~~~~--~~~~~~~~~~~i~~~~G~~gly~  187 (270)
                      |..||..+++....   ...++..++++|++||+++.+++||||++|+|+.++..  .|+++.+.+++|+++||++||||
T Consensus       105 f~aye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~~a~~~I~~~eGi~gfYr  184 (320)
T KOG0752|consen  105 FSAYEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLLHAFKTIYREEGIRGFYR  184 (320)
T ss_pred             hhHHHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHHHHHHHHHHhcchhhhhc
Confidence            99999999854333   25678899999999999999999999999999977655  69999999999999999999999


Q ss_pred             hhHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHhhcCcHHHHHHHHhccccc
Q 024275          188 SYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHATAGAAAGALAATLTTPLDVVKTQLQCQVRT  261 (270)
Q Consensus       188 G~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~t~Pld~vr~r~q~~~~~  261 (270)
                      |+.|++++.+|+.++.|..||.+|++.+. ...+.++.+.+..+++|++||++++.++||||+||+|||+.+..
T Consensus       185 Gl~ptllgi~Pyag~~F~~Yd~lk~~~~~-~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~  257 (320)
T KOG0752|consen  185 GLGPTLLGIAPYAGINFFAYDTLKKWQYL-KSSGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLK  257 (320)
T ss_pred             CcchhhheehhhhhhHHHHHHHHHHhhcc-cccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCcc
Confidence            99999999999999999999999996222 22223556788899999999999999999999999999999864



>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query270
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 4e-12
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 9e-10
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 19/231 (8%) Query: 38 QFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPL-------HPAGVRQAFSSVLKLEG 90 +F+ +G+ A + + +P+DT K R+Q+ G S+ L GV ++++ EG Sbjct: 4 KFLGAGT-AACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEG 62 Query: 91 PAGFYRGIAAMGLGAGPAHA-VYFSVYELCKEFFSGGVPNNSM-AHAVSGVFSTVASDAV 148 P Y G+ A GL + A V +Y+ K+F++ G + + + ++G + + AV Sbjct: 63 PRSLYNGLVA-GLQRQMSFASVRIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAV 121 Query: 149 ITPMDMVKQRLQLKSSP-----YKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVH 203 P D+VK R Q ++ Y+ + K + EEGI + V NA Sbjct: 122 AQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAE 181 Query: 204 FATYEAVKRALMEFDPNSGSDESLVVHXXXXXXXXXXXXXXXXPLDVVKTQ 254 TY+ +K L++ N +D+ L H P+DVVKT+ Sbjct: 182 LVTYDLIKDTLLK--ANLMTDD-LPCHFTSAFGAGFCTTVIASPVDVVKTR 229
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query270
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-49
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-36
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 7e-27
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 5e-48
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 7e-34
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 2e-21
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-11
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 4e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  163 bits (415), Expect = 3e-49
 Identities = 50/241 (20%), Positives = 101/241 (41%), Gaps = 21/241 (8%)

Query: 34  LEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPA----GVRQAFSSVLKLE 89
           L F +  ++G +A ++   A+ P++ +K  +QV  AS+ +       G+      + K +
Sbjct: 5   LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQ 64

Query: 90  GPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHA------VSGVFSTV 143
           G   F+RG  A  +   P  A+ F+  +  K+ F GGV  +            SG  +  
Sbjct: 65  GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGA 124

Query: 144 ASDAVITPMDMVKQRLQLKSSP------YKGVADCVKRVLVEEGIGAFYASYRTTVIMNA 197
            S   + P+D  + RL            + G+ +C+ ++   +G+   Y  +  +V    
Sbjct: 125 TSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGII 184

Query: 198 PFQAVHFATYEAVKRALMEFDPNSGSDESLVVHATAGAAAGALAATLTTPLDVVKTQLQC 257
            ++A +F  Y+  K  L +       +  ++V         A+A  ++ P D V+ ++  
Sbjct: 185 IYRAAYFGVYDTAKGMLPD-----PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 239

Query: 258 Q 258
           Q
Sbjct: 240 Q 240


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query270
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=3.8e-46  Score=317.38  Aligned_cols=223  Identities=22%  Similarity=0.383  Sum_probs=196.7

Q ss_pred             ChhHHHHHHHHHHHHHHHhhhhchHHHHHHHHHhcCCCC----CCCCCcHHHHHHHHHhhhCccccccchhhhhhchhhh
Q 024275           33 GLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASR----PLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPA  108 (270)
Q Consensus        33 ~~~~~~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~~----~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~  108 (270)
                      ..+.+..+++|++|++++.++++|+|++|+|+|++....    ...+++.++++++++++||++|||||+.+++++.++.
T Consensus         4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~   83 (297)
T 1okc_A            4 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   83 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHH
Confidence            456788999999999999999999999999999986421    2357899999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHhh-cCCCC-C----chHHHHHHHHHHHHhhhhhcccHHHHHHHHhcCC------CCCCCHHHHHHHH
Q 024275          109 HAVYFSVYELCKEFF-SGGVP-N----NSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKS------SPYKGVADCVKRV  176 (270)
Q Consensus       109 ~~~~~~~~~~~~~~~-~~~~~-~----~~~~~~~~g~~a~~~~~~i~~Pld~ik~r~q~~~------~~~~~~~~~~~~i  176 (270)
                      .+++|.+||.+++.+ ..... .    +....+++|++||++++++++|+|++|+|+|++.      .+|.+.++++++|
T Consensus        84 ~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i  163 (297)
T 1okc_A           84 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKI  163 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHH
Confidence            999999999999954 33221 1    2356789999999999999999999999999874      3689999999999


Q ss_pred             HHhhChhhhcchhHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHhhcCcHHHHHHHHh
Q 024275          177 LVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHATAGAAAGALAATLTTPLDVVKTQLQ  256 (270)
Q Consensus       177 ~~~~G~~gly~G~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~t~Pld~vr~r~q  256 (270)
                      +++||++|||||+.+++++.+++.+++|.+||.+++.+.+..     +.+....+++|++||++++++++|+|+||+|||
T Consensus       164 ~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~-----~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q  238 (297)
T 1okc_A          164 FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK-----NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMM  238 (297)
T ss_dssp             HHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG-----CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC-----CccHHHHHHHHHHHHHHHHHhcChHHHHHHHHh
Confidence            999999999999999999999999999999999999764321     245677889999999999999999999999999


Q ss_pred             cccc
Q 024275          257 CQVR  260 (270)
Q Consensus       257 ~~~~  260 (270)
                      ++..
T Consensus       239 ~~~~  242 (297)
T 1okc_A          239 MQSG  242 (297)
T ss_dssp             TTTT
T ss_pred             hcCC
Confidence            9864



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 270
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-17
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-16
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-11
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 78.2 bits (191), Expect = 1e-17
 Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 9/183 (4%)

Query: 36  FWQFMISGSIAGSVEHMAMYPVDTLKTRM--QVIGASRPLHPAGVRQAFSSVLKLEGPAG 93
           F   + SG  AG+     +YP+D  +TR+   V   +      G+    + + K +G  G
Sbjct: 111 FAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRG 170

Query: 94  FYRGIAAMGLGAGPAHAVYFSVYELCKEFFSGGVPNNSMAHAVSGVFSTVASDAVITPMD 153
            Y+G      G     A YF VY+  K         + +   +     T  +  V  P D
Sbjct: 171 LYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFD 230

Query: 154 MVKQRLQLKSS------PYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATY 207
            V++R+ ++S        Y G  DC +++  +EG  AF+    + V+      A     Y
Sbjct: 231 TVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLY 289

Query: 208 EAV 210
           + +
Sbjct: 290 DEI 292


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query270
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.98
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=8.5e-42  Score=287.65  Aligned_cols=226  Identities=22%  Similarity=0.396  Sum_probs=200.5

Q ss_pred             CChhHHHHHHHHHHHHHHHhhhhchHHHHHHHHHhcCCCC----CCCCCcHHHHHHHHHhhhCccccccchhhhhhchhh
Q 024275           32 DGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASR----PLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGP  107 (270)
Q Consensus        32 ~~~~~~~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~~----~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~  107 (270)
                      .+.+++..+++|++|++++.+++||||++|+|+|++....    ...+++.++++++++++||+++||+|+.+.+++..+
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~   81 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   81 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhc
Confidence            3578899999999999999999999999999999987532    235689999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHhhcCCCC--C----chHHHHHHHHHHHHhhhhhcccHHHHHHHHhcCC------CCCCCHHHHHHH
Q 024275          108 AHAVYFSVYELCKEFFSGGVP--N----NSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKS------SPYKGVADCVKR  175 (270)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~g~~a~~~~~~i~~Pld~ik~r~q~~~------~~~~~~~~~~~~  175 (270)
                      ...++|.+|+.+++.+.+...  .    .....+++|.+|++++.++++|+|++|+|+|.+.      ..|.+..+++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~  161 (292)
T d1okca_          82 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITK  161 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHH
Confidence            999999999999998876521  1    1245678999999999999999999999999874      357889999999


Q ss_pred             HHHhhChhhhcchhHHHHHHHhhHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHhhcCcHHHHHHHH
Q 024275          176 VLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHATAGAAAGALAATLTTPLDVVKTQL  255 (270)
Q Consensus       176 i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~t~Pld~vr~r~  255 (270)
                      ++++||+++||+|+.+.+++.+++.+++|..||.+|+.+.+.     ........++++++++.++++++|||||||+||
T Consensus       162 ~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~  236 (292)
T d1okca_         162 IFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP-----KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRM  236 (292)
T ss_dssp             HHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG-----GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc-----cccchHHHHHHHHHHHHHHhhccccHHHHHHHH
Confidence            999999999999999999999999999999999999876443     334567788999999999999999999999999


Q ss_pred             hcccccc
Q 024275          256 QCQVRTV  262 (270)
Q Consensus       256 q~~~~~~  262 (270)
                      |.+..+.
T Consensus       237 q~~~~~~  243 (292)
T d1okca_         237 MMQSGRK  243 (292)
T ss_dssp             HTTTTCC
T ss_pred             HhcCCCC
Confidence            9998654



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure