Citrus Sinensis ID: 024287

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
MGSLCQLIEKHIFKLESVQVLVIDEVDFLFNSSKQVSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEELTLQTQC
cccHHHHHccccccccccEEEEEEcccccccccccccHHHHHHHHcccccccCEEEEEccccHHHHHHHHHHHHHccccccEEEEEEccccccccEEEEEEEcccccHHHHHHHHHccccccEEEEEEcccccHHHHccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHHcccccEEEEEcccccccccccccEEEEcccccccccccccccccccccccccccEEEEEEcHHHHHHHHHHHHHHccccccccccccc
MGSLCQLIEKHIFKLESVQVLVIDEVDFLFNSSKQVSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEELTLQ***
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MGSLCQLIEKHIFKLESVQVLVIDEVDFLFNSSKQVSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEELTLQTQC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
DEAD-box ATP-dependent RNA helicase 58, chloroplastic probableQ0JFN7
DEAD-box ATP-dependent RNA helicase 58, chloroplastic probableQ3E9C3

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.6.-.-Acting on acid anhydrides.probable
3.6.4.-Acting on acid anhydrides; involved in cellular and subcellular movement.probable
3.6.4.13RNA helicase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3I5X, chain A
Confidence level:very confident
Coverage over the Query: 1-136,147-263
View the alignment between query and template
View the model in PyMOL