Citrus Sinensis ID: 024290

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
Protein Sequence
MALRSLPTQLPTRGNLHQPHPHHHMKGSLSWCHTLTPLPLLSPSANSLGKVCTQQMVVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIHGHSGYSATDIRSFTQ
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEcccccccccccccccEEEEEEccccccHHHHHccccEEEEcccccccccHHHHcHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHHHccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHcccccccccccccccccccccccccccEEccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHcccEEEEEccccHHHHHHHHccccEEEEEccccccccccEEcHHHHHHHHHHHHHccccEEEEEEEEcccccccccHHHHHHHHHHHHHHccccEEEEEccHHHHHccHHHcccHHHcccccccccccccccEEEEEHHHHcc
Coil and Loop (DISEMBL)
malrslptqlptrgnlhqphphhhmkgslswchtltplpllspsanslgkvcTQQMVVKcsagggtsgtvqavnmspgtpvrptsilvvgatgtLGRQIVRRALdegydvrclvrprpapadflrdwgatvvnadlskpetipatlVGVHTvidcatgrpeepikkvdwEGKVALIQCAKAMGIQKYVFYSIhncdkhpevplmeIKYCTEQflqdsglphviirlwpywaicstytrrevclgngctnsncihghsgysatdirsftq
Flexible Loop (DISEMBL)
malrslptqlptrgnlhqpHPHHHMKGSLSWCHTLTPLPLLSPSANSLGKVCTQQMVVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRaldegydvrcLVRPrpapadflrDWGATVVNADlskpetipatlvGVHTVIDCAtgrpeepikkvdwEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNsncihghsgysatdirsftq
Low Complexity Region (SEG)
MALRSLPTQLPTRGNLHQPHPHHHMKGSLSWCHtltplpllspsANSLGKVCTQQMVVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIHGHSGYSATDIRSFTQ
Disordered region (IsUnstruct)
***************************SLSWCHTLTPLPLLSPSANSLGKVCTQQMVVKCSAGGGTSGTVQAVN*****PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIHGHSGY**********
Disordered Region (DISOPRED)
**************************************************************************************LVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP**FLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIHGHSGYSATDIRSFTQ
Disordered Region (DISEMBL)
MALRSLPTQLPTRGNL***********SLSWCHTLTPLPLLSPSANSLGKVCTQQMVVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIHGHSGYSATDIRSFTQ
Disordered Region (DISPRO)
*****************************SWCHTLTPLPLLSPS****GKVCTQQMVVKCSA*******************RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIHGHSGYSATDIRSFTQ
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALRSLPTQLPTRGNLHQPHPHHHMKGSLSWCHTLTPLPLLSPSANSLGKVCTQQMVVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIHGHSGYSATDIRSFTQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	269	2.2.26 [Sep-21-2011]
P48279	321	Uncharacterized protein y	N/A	no	0.524	0.439	0.548	2e-40
P51238	319	Uncharacterized protein y	N/A	no	0.524	0.442	0.493	4e-37
O78472	314	Uncharacterized protein y	yes	no	0.539	0.461	0.486	1e-36
Q1XDP9	319	Uncharacterized protein y	N/A	no	0.539	0.454	0.466	6e-36
P49534	319	Uncharacterized protein y	N/A	no	0.539	0.454	0.472	5e-35
O19883	312	Uncharacterized protein y	N/A	no	0.516	0.445	0.401	1e-22
Q8H124	280	Uncharacterized protein A	no	no	0.572	0.55	0.265	4e-07
Q8KU07	286	NAD(P)H azoreductase OS=X	N/A	no	0.486	0.458	0.302	1e-06
O80934	325	Uncharacterized protein A	no	no	0.561	0.464	0.271	2e-05
Q94EG6	253	Uncharacterized protein A	no	no	0.509	0.541	0.279	6e-05

>sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1

 Score =  166 bits (420), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/144 (54%), Positives = 106/144 (73%), Gaps = 3/144 (2%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           SILV+GATGTLGRQIVR ALDEGY VRCLVR     A FL++WGA ++  DLS+PE++  
Sbjct: 2   SILVIGATGTLGRQIVRSALDEGYQVRCLVRNLRKAA-FLKEWGAKLIWGDLSQPESLLP 60

Query: 145 TLVGVHTVIDCATGRPEEP--IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
            L G+  +ID +T RP +P  + +VD +GK ALI  AKAM I+K++F+SI N +K+ +VP
Sbjct: 61  ALTGIRVIIDTSTSRPTDPAGVYQVDLKGKKALIDAAKAMKIEKFIFFSILNSEKYSQVP 120

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRL 226
           LM IK  TE+ L++SGL + I +L
Sbjct: 121 LMRIKTVTEELLKESGLNYTIFKL 144

Cyanophora paradoxa (taxid: 2762)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|P51238|YCF39_PORPU Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3 SV=1

 Score =  155 bits (391), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 71/144 (49%), Positives = 103/144 (71%), Gaps = 3/144 (2%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           ++LV+GATGTLGRQIVRRALDEGY+V+C+VR     A FL++WGA +V  DL  PE+I  
Sbjct: 2   TLLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSA-FLKEWGAELVYGDLKLPESILQ 60

Query: 145 TLVGVHTVIDCATGRPEEPI--KKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
           +  GV  VID +T RP +P   +++D +GK+ALI+ AKA  +Q+++F+SI N D++P+VP
Sbjct: 61  SFCGVTAVIDASTSRPSDPYNTEQIDLDGKIALIEAAKAAKVQRFIFFSILNADQYPKVP 120

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRL 226
           LM +K     +LQ S + + +  L
Sbjct: 121 LMNLKSQVVNYLQKSSISYTVFSL 144

Porphyra purpurea (taxid: 2787)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O78472|YCF39_GUITH Uncharacterized protein ycf39 OS=Guillardia theta GN=ycf39 PE=3 SV=1

 Score =  153 bits (387), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 72/148 (48%), Positives = 103/148 (69%), Gaps = 3/148 (2%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           S+LV+GATGTLGRQIVRRALDEGY+V CLVR     A FL++WGA ++  DLS PET+P 
Sbjct: 2   SLLVIGATGTLGRQIVRRALDEGYEVSCLVR-NLRKAYFLKEWGAELLYGDLSLPETLPT 60

Query: 145 TLVGVHTVIDCATGRPEEPIK--KVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
            L  +  +ID +T RP +P K  K+D EGK+AL++ AK  GI+++VF+S+ N   +  +P
Sbjct: 61  NLTKITAIIDASTARPSDPYKAEKIDLEGKIALVEAAKVAGIKRFVFFSVLNAQNYRHLP 120

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLWPYW 230
           L+ +K   E++LQ S L +   +L  ++
Sbjct: 121 LVNLKCRMEEYLQTSELEYTTFQLSGFF 148

Guillardia theta (taxid: 55529)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q1XDP9|YCF39_PORYE Uncharacterized protein ycf39 OS=Porphyra yezoensis GN=ycf39 PE=3 SV=1

 Score =  150 bits (380), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 105/148 (70%), Gaps = 3/148 (2%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           ++LV+GATGTLGRQIVRRALDEGY+V+C+VR     A FL++WGA ++  DL  PE+I  
Sbjct: 2   TLLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSA-FLKEWGAELIYGDLKLPESILQ 60

Query: 145 TLVGVHTVIDCATGRPEEPI--KKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
           +  GV  +ID +T R  +P   +K+D +GK+ALI+ AKA  +++++F+SI N +K+P+VP
Sbjct: 61  SFCGVTAIIDASTSRLPDPYNAEKIDLDGKIALIEAAKAAKVERFIFFSILNSEKYPDVP 120

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLWPYW 230
           LM +K     FLQ S + +++  L  ++
Sbjct: 121 LMNLKSQVVDFLQKSNVKYIVFSLGGFF 148

Porphyra yezoensis (taxid: 2788)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P49534|YCF39_ODOSI Uncharacterized protein ycf39 OS=Odontella sinensis GN=ycf39 PE=3 SV=1

 Score =  148 bits (373), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 70/148 (47%), Positives = 103/148 (69%), Gaps = 3/148 (2%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           S+L++G TGTLGRQ+V +AL +GY VRCLVR     A+FL++WGA ++  DLS+PETIP 
Sbjct: 2   SLLIIGGTGTLGRQVVLQALTKGYQVRCLVR-NFRKANFLKEWGAELIYGDLSRPETIPP 60

Query: 145 TLVGVHTVIDCATGRPEE--PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
            L G+  VID +T RP +   +K+VDW+GK ALI+ A+A  ++ +VF S  N ++   +P
Sbjct: 61  CLQGITAVIDTSTSRPSDLDTLKQVDWDGKCALIEAAQAANVKHFVFCSSQNVEQFLNIP 120

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLWPYW 230
           LME+K+  E  LQ S +P+ + RL  ++
Sbjct: 121 LMEMKFGIETKLQQSNIPYTVFRLAGFY 148

Odontella sinensis (taxid: 2839)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O19883|YCF39_CYACA Uncharacterized protein ycf39 OS=Cyanidium caldarium GN=ycf39 PE=3 SV=1

 Score =  107 bits (266), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 89/142 (62%), Gaps = 3/142 (2%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           S+LV+GAT TLGRQIV++AL +GY+V+CLVR     A FL+ WGA +V  DL  PET+P 
Sbjct: 2   SLLVIGATSTLGRQIVKKALIQGYEVKCLVRNSKKAA-FLKAWGAILVYGDLMVPETLPQ 60

Query: 145 TLVGVHTVIDCATGRPEEPIKK--VDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
             VG   +ID +T + ++      VD   K A+++ A    ++K+V +S+ N  ++ +VP
Sbjct: 61  CFVGASVIIDVSTVKVKDLNNDYTVDIYCKRAVLEAAIQAKVKKFVSFSMFNSSQYLDVP 120

Query: 203 LMEIKYCTEQFLQDSGLPHVII 224
             +IK   ++ L  SG+ ++I 
Sbjct: 121 STKIKSDFDRALIKSGINYLIF 142

Cyanidium caldarium (taxid: 2771)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1

 Score = 55.5 bits (132), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 23/177 (12%)

Query: 72  AVNMSPG---TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP-RPAPADFLRDW 127
           ++ M  G     V+   + V GATG  G++IV + L  G+ V+  VR    A   F  D 
Sbjct: 32  SIKMEKGEAENAVKTKKVFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDP 91

Query: 128 GATVVNADLSK-PETIPATLVGVHTVIDCATG-RPEEPIK---KVDWEGKVALIQCAKAM 182
              +V AD+++ P+ +   +      + CATG RP   I    KVD  G V L+   +  
Sbjct: 92  SLQIVRADVTEGPDKLAEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQ 151

Query: 183 GIQKYVFYSIHNCDK-------HPEVPLMEI-------KYCTEQFLQDSGLPHVIIR 225
           G++K+V  S    +        +P    + +       K   E++++ SG+ + I+R
Sbjct: 152 GVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVR 208

Arabidopsis thaliana (taxid: 3702)

>sp|Q8KU07|AZOB_XENAZ NAD(P)H azoreductase OS=Xenophilus azovorans GN=azoB PE=1 SV=2

 Score = 54.3 bits (129), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 11/142 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILVVG TGT+G ++VR   +     + LVR   A A  L   G      DL +P T+PA 
Sbjct: 2   ILVVGGTGTIGSEVVRLLQEAKLPFKALVR-DAAKARELNARGVQTAAGDLREPRTLPAA 60

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLME 205
           L GV  V       P++       + + ALI  AK  G++ +V  +       P+ P+  
Sbjct: 61  LGGVDKVFVVTPLVPDQ------VQMRAALITAAKTAGVKHFVMST--GIGAAPDSPVQI 112

Query: 206 IKYCTE--QFLQDSGLPHVIIR 225
            ++  E  Q +Q+SG+    ++
Sbjct: 113 GRWLGENQQQVQESGMAWTFVQ 134

Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Uses preferentially NADPH rather than NADH as an electron donor for its activity. The enzyme reductively cleaved Orange II and carboxy-Orange II, and can also reduce several sulfonated structural analogs, which carry a hydroxy group in the 2 position of the naphthol ring.

Xenophilus azovorans (taxid: 151755)

EC: 1

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2

 Score = 49.7 bits (117), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 33/184 (17%)

Query: 72  AVNMSPGTPVRPTSILVVGATGTLGRQIVRRAL---DEGYDVRCLVRPRPAPADFLRDWG 128
           +V +S      P ++LV GA G  G QIV + L    E +  R LVR + +      +  
Sbjct: 65  SVTVSAAATTEPLTVLVTGAGGRTG-QIVYKKLKERSEQFVARGLVRTKESKEKI--NGE 121

Query: 129 ATVVNADLSKPETIPATLVGVHTVIDCAT--------------GRPEEPI------KKVD 168
             V   D+    +I   + G+  ++   +              GRPE         ++VD
Sbjct: 122 DEVFIGDIRDTASIAPAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVD 181

Query: 169 WEGKVALIQCAKAMGIQKYVFY-SIHNCD-KHP-----EVPLMEIKYCTEQFLQDSGLPH 221
           W G+   I  AKA G+++ V   S+   +  HP        ++  K   EQ+L DSG+P+
Sbjct: 182 WIGQKNQIDAAKAAGVKQIVLVGSMGGTNINHPLNSIGNANILVWKRKAEQYLADSGIPY 241

Query: 222 VIIR 225
            IIR
Sbjct: 242 TIIR 245

Arabidopsis thaliana (taxid: 3702)

>sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1

 Score = 48.1 bits (113), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 35/172 (20%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYD---VRCLVRPRPAPADFLRDWGATVVNADLSKPET 141
           ++LV GA+G  G QIV + L EG D    + LVR          +  A V   D++  ++
Sbjct: 6   TVLVTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE--ADVFIGDITDADS 62

Query: 142 IPATLVGVHTVIDCAT--------------GRPEEPIK------KVDWEGKVALIQCAKA 181
           I     G+  ++   +              GRPE   +      +VDW G+   I  AK 
Sbjct: 63  INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV 122

Query: 182 MGIQKYVFYSIHNCDKHPEVPLMEI--------KYCTEQFLQDSGLPHVIIR 225
            G+ K++         +P+ PL ++        K   EQ+L DSG P+ IIR
Sbjct: 123 AGV-KHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIR 173

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
224080772	399	predicted protein [Populus trichocarpa]	0.799	0.538	0.776	6e-93
297798398	400	hypothetical protein ARALYDRAFT_491124 [	0.810	0.545	0.723	3e-87
15236930	395	Rossmann-fold NAD(P)-binding domain-cont	0.810	0.551	0.756	6e-86
255586211	404	conserved hypothetical protein [Ricinus	0.832	0.554	0.742	2e-85
225428167	397	PREDICTED: uncharacterized protein ycf39	0.788	0.534	0.729	2e-84
147784532	397	hypothetical protein VITISV_029950 [Viti	0.784	0.531	0.730	2e-84
357467621	391	hypothetical protein MTR_3g118430 [Medic	0.594	0.409	0.925	1e-83
217072508	396	unknown [Medicago truncatula]	0.594	0.404	0.925	2e-83
242079675	385	hypothetical protein SORBIDRAFT_07g02459	0.773	0.540	0.702	2e-82
326488323	386	predicted protein [Hordeum vulgare subsp	0.773	0.538	0.716	4e-82

>gi|224080772|ref|XP_002306225.1| predicted protein [Populus trichocarpa] gi|222849189|gb|EEE86736.1| predicted protein [Populus trichocarpa]

 Score =  346 bits (887), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 177/228 (77%), Positives = 186/228 (81%), Gaps = 13/228 (5%)

Query: 6   LPTQLPTRGNLHQPHPHHHMKGS-------LSWCHTLTPLPLLSPSANSLGKVCTQQMVV 58
           LP QL T G LH     HH + +       LSW  TL+P PLLS S +     C  + +V
Sbjct: 5   LPAQLATPGKLH-----HHCQFTITSAFIPLSWRRTLSPEPLLSLSTSFPSGKCNGKQLV 59

Query: 59  KCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP 118
            CSA G    T  AVN+ PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP
Sbjct: 60  TCSAIGTAEAT-GAVNLGPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP 118

Query: 119 APADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQC 178
           APADFLRDWGA VVNADLSKPETIPAT+VGVHTVIDCATGRPEEPIK VDWEGKVALIQC
Sbjct: 119 APADFLRDWGAIVVNADLSKPETIPATMVGVHTVIDCATGRPEEPIKTVDWEGKVALIQC 178

Query: 179 AKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRL 226
           AKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTE+FLQDSGLPHVIIRL
Sbjct: 179 AKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFLQDSGLPHVIIRL 226

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798398|ref|XP_002867083.1| hypothetical protein ARALYDRAFT_491124 [Arabidopsis lyrata subsp. lyrata] gi|297312919|gb|EFH43342.1| hypothetical protein ARALYDRAFT_491124 [Arabidopsis lyrata subsp. lyrata]

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 170/235 (72%), Positives = 182/235 (77%), Gaps = 17/235 (7%)

Query: 1   MALRSLPTQLPTRG-----NLHQPHPHHHMKGSLSWCHTLTPLPLLSPSANSLGKVCTQQ 55
           MA   LPTQL TRG     N           G LSW  +LTP   +S   +S      ++
Sbjct: 1   MAALRLPTQLVTRGTLDYHNSSPSSATAASSGRLSWRRSLTPENSISLFPSSSSSSLNRE 60

Query: 56  MV----VKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVR 111
            +    V CSA         AVN++PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVR
Sbjct: 61  RLIVVPVTCSAA--------AVNLAPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVR 112

Query: 112 CLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEG 171
           CLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG+HTVIDCATGRPEEPIK VDWEG
Sbjct: 113 CLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGIHTVIDCATGRPEEPIKTVDWEG 172

Query: 172 KVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRL 226
           KVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTE+FLQ+SGL H+ IRL
Sbjct: 173 KVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFLQESGLNHITIRL 227

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15236930|ref|NP_195251.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|18087583|gb|AAL58922.1|AF462834_1 AT4g35250/F23E12_190 [Arabidopsis thaliana] gi|3080425|emb|CAA18744.1| putative protein [Arabidopsis thaliana] gi|7270477|emb|CAB80242.1| putative protein [Arabidopsis thaliana] gi|22137054|gb|AAM91372.1| At4g35250/F23E12_190 [Arabidopsis thaliana] gi|332661085|gb|AEE86485.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  323 bits (827), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 174/230 (75%), Positives = 188/230 (81%), Gaps = 12/230 (5%)

Query: 1   MALRSLPTQLPTRGNLHQPHPHHHMKGSLSWCHTLTP---LPLL-SPSANSLGKVCTQQM 56
           MA   LP QL TRGNL   +      G LSW  +LTP   +PL  S S++SL +  +  +
Sbjct: 1   MASLRLPAQLVTRGNLIHHNSSSSSSGRLSWRRSLTPENTIPLFPSSSSSSLNRERSIVV 60

Query: 57  VVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP 116
            V CSA         AVN++PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP
Sbjct: 61  PVTCSAA--------AVNLAPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP 112

Query: 117 RPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALI 176
           RPAPADFLRDWGATVVNADLSKPETIPATLVG+HTVIDCATGRPEEPIK VDWEGKVALI
Sbjct: 113 RPAPADFLRDWGATVVNADLSKPETIPATLVGIHTVIDCATGRPEEPIKTVDWEGKVALI 172

Query: 177 QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRL 226
           QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTE+FLQ+SGL H+ IRL
Sbjct: 173 QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFLQESGLNHITIRL 222

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586211|ref|XP_002533763.1| conserved hypothetical protein [Ricinus communis] gi|223526320|gb|EEF28622.1| conserved hypothetical protein [Ricinus communis]

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 173/233 (74%), Positives = 182/233 (78%), Gaps = 9/233 (3%)

Query: 1   MALRSLPTQLPTRGNL-HQ----PHPHHHMKGSLSWCHTLTPLPLLSPSANSLGKVCTQQ 55
           MALR    QL T G   HQ    P        +LSW   LTP PL+S S      V T  
Sbjct: 1   MALRFSTIQLATPGKRCHQIAIPPSSSSSNSSTLSWHRNLTPHPLISLSTGKCS-VRTTA 59

Query: 56  MVVKCSAGGGTSGTV--QAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCL 113
             V C+A     GTV    VN+ PGTPVRPTSILVVG TGTLGRQIVRRALDEGYDVRCL
Sbjct: 60  AGVTCNASAA-EGTVVPGTVNLGPGTPVRPTSILVVGPTGTLGRQIVRRALDEGYDVRCL 118

Query: 114 VRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKV 173
           VRPRPAPADFLRDWGATVVNADLSKPETIPATLVG+HT+IDCATGRPEEPIK VDWEGKV
Sbjct: 119 VRPRPAPADFLRDWGATVVNADLSKPETIPATLVGIHTIIDCATGRPEEPIKTVDWEGKV 178

Query: 174 ALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRL 226
           ALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTE+FL+DSG+ HVIIRL
Sbjct: 179 ALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFLKDSGINHVIIRL 231

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428167|ref|XP_002278811.1| PREDICTED: uncharacterized protein ycf39 [Vitis vinifera] gi|297744530|emb|CBI37792.3| unnamed protein product [Vitis vinifera]

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 167/229 (72%), Positives = 178/229 (77%), Gaps = 17/229 (7%)

Query: 6   LPTQLPTRGNLHQPHPHHHMK-GSLSWCHTLT-----PLPLLSP--SANSLGKVCTQQMV 57
           LPTQL T  +L     H   K  SLSW  TL+     P PL S   S N L K      V
Sbjct: 5   LPTQLATARSLDSRGHHSKPKPSSLSWRTTLSSNGVVPSPLTSSNLSFNGLPKRSVLP-V 63

Query: 58  VKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR 117
           V+CS          AVN+ PGTPVR TS+LVVGATGTLGRQ+VRRALDEGYDVRCLVRPR
Sbjct: 64  VRCSGA--------AVNLGPGTPVRSTSVLVVGATGTLGRQVVRRALDEGYDVRCLVRPR 115

Query: 118 PAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQ 177
           PAPADFLRDWGA VVNADL+KPETIPATLVG+HTVIDCATGRPEEPIK VDWEGKVALIQ
Sbjct: 116 PAPADFLRDWGAIVVNADLTKPETIPATLVGIHTVIDCATGRPEEPIKTVDWEGKVALIQ 175

Query: 178 CAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRL 226
           CAKAMGIQKYVF+SIHNCD HPEVPLMEIKYCTE+FLQD GL H+IIRL
Sbjct: 176 CAKAMGIQKYVFFSIHNCDNHPEVPLMEIKYCTEKFLQDIGLTHIIIRL 224

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147784532|emb|CAN77228.1| hypothetical protein VITISV_029950 [Vitis vinifera]

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 168/230 (73%), Positives = 179/230 (77%), Gaps = 19/230 (8%)

Query: 6   LPTQLPTRGNLHQPHPHHHMK--GSLSWCHTLT-----PLPLLSP--SANSLGKVCTQQM 56
           LPTQL T  +L   H HH      SLSW  TL+     P PL S   S N L K      
Sbjct: 5   LPTQLATARSLDS-HGHHSKPKPSSLSWRTTLSSNGVVPSPLTSSNLSFNGLPKRSVLP- 62

Query: 57  VVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP 116
           VV+CS          AVN+ PGTPVR TS+LVVGATGTLGRQ+VRRALDEGYDVRCLVRP
Sbjct: 63  VVRCSGA--------AVNLGPGTPVRSTSVLVVGATGTLGRQVVRRALDEGYDVRCLVRP 114

Query: 117 RPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALI 176
           RPAPADFLRDWGA VVNADL+KPETIPATLVG+HTVIDCATGRPEEPIK VDWEGKVALI
Sbjct: 115 RPAPADFLRDWGAIVVNADLTKPETIPATLVGIHTVIDCATGRPEEPIKTVDWEGKVALI 174

Query: 177 QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRL 226
           QCAKAMGIQKYVF+SIHNCD HPEVPLMEIKYCTE+FLQD GL H+IIRL
Sbjct: 175 QCAKAMGIQKYVFFSIHNCDNHPEVPLMEIKYCTEKFLQDIGLXHIIIRL 224

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357467621|ref|XP_003604095.1| hypothetical protein MTR_3g118430 [Medicago truncatula] gi|355493143|gb|AES74346.1| hypothetical protein MTR_3g118430 [Medicago truncatula]

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 148/160 (92%), Positives = 154/160 (96%)

Query: 67  SGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD 126
           S + +AVN+ PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD
Sbjct: 59  SNSERAVNLGPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD 118

Query: 127 WGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQK 186
           WGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIK VDWEGKVALIQCAKAMGIQK
Sbjct: 119 WGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKTVDWEGKVALIQCAKAMGIQK 178

Query: 187 YVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRL 226
           YVFYSIHNCDKHPEVPLMEIKYCTE FL+DSGL H++IRL
Sbjct: 179 YVFYSIHNCDKHPEVPLMEIKYCTENFLRDSGLNHIVIRL 218

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072508|gb|ACJ84614.1| unknown [Medicago truncatula]

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 148/160 (92%), Positives = 154/160 (96%)

Query: 67  SGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD 126
           S + +AVN+ PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD
Sbjct: 59  SNSERAVNLGPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD 118

Query: 127 WGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQK 186
           WGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIK VDWEGKVALIQCAKAMGIQK
Sbjct: 119 WGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKTVDWEGKVALIQCAKAMGIQK 178

Query: 187 YVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRL 226
           YVFYSIHNCDKHPEVPLMEIKYCTE FL+DSGL H++IRL
Sbjct: 179 YVFYSIHNCDKHPEVPLMEIKYCTENFLRDSGLNHIVIRL 218

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242079675|ref|XP_002444606.1| hypothetical protein SORBIDRAFT_07g024590 [Sorghum bicolor] gi|241940956|gb|EES14101.1| hypothetical protein SORBIDRAFT_07g024590 [Sorghum bicolor]

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 158/225 (70%), Positives = 180/225 (80%), Gaps = 17/225 (7%)

Query: 2   ALRSLPTQLPTRGNLHQPHPHHHMKGSLSWCHTLTPLPLLSPSANSLGKVCTQQMVVKCS 61
           +L +LP+QL + G L +       + +LS   + +   LL   A   G  C  ++ V C+
Sbjct: 5   SLAALPSQLASPGRLRR-------RAALS---SASRSNLLLHRATKGGSRC--RLAVTCN 52

Query: 62  AGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA 121
           A       V   +++ GTPVRPTSILVVGATGTLGRQ+VRRALDEGYDVRCLVRPRPAPA
Sbjct: 53  AQA-----VAPTSIAQGTPVRPTSILVVGATGTLGRQVVRRALDEGYDVRCLVRPRPAPA 107

Query: 122 DFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKA 181
           DFLRDWGATVVNADLSKPETIPATLVG+HTVIDCATGRPEEPI+ VDWEGKVALIQCAKA
Sbjct: 108 DFLRDWGATVVNADLSKPETIPATLVGIHTVIDCATGRPEEPIRTVDWEGKVALIQCAKA 167

Query: 182 MGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRL 226
           MGIQKYVFYSIHNCDKHPEVPLMEIKYCTE+F+QDSGL ++IIRL
Sbjct: 168 MGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFIQDSGLDYIIIRL 212

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326488323|dbj|BAJ93830.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326510869|dbj|BAJ91782.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  310 bits (794), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 159/222 (71%), Positives = 179/222 (80%), Gaps = 14/222 (6%)

Query: 5   SLPTQLPTRGNLHQPHPHHHMKGSLSWCHTLTPLPLLSPSANSLGKVCTQQMVVKCSAGG 64
           SL   LP+R       P H  +G+LSW  T +  P  + + +S G  C  ++VV C+A  
Sbjct: 6   SLAAALPSRLT----SPGH--RGALSWA-TSSARPHPARAVSSGGPRC--RLVVTCNAQA 56

Query: 65  GTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL 124
                   +++  GTPVRPTS+LVVGATGTLGRQ+VRRALDEGYDVRCLVRPRPAPADFL
Sbjct: 57  AAP-----MSIGQGTPVRPTSVLVVGATGTLGRQVVRRALDEGYDVRCLVRPRPAPADFL 111

Query: 125 RDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGI 184
           RDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPI+ VDWEGKVALIQCAKAMGI
Sbjct: 112 RDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIRTVDWEGKVALIQCAKAMGI 171

Query: 185 QKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRL 226
           QKYVFYSIHNCDKHPEVPLMEIKYCTE+F+QD+GL + IIRL
Sbjct: 172 QKYVFYSIHNCDKHPEVPLMEIKYCTERFIQDTGLDYTIIRL 213

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
TAIR|locus:2122083	395	HCF244 "high chlorophyll fluor	0.810	0.551	0.726	3.6e-82
UNIPROTKB|Q880Y0	289	PSPTO_3020 "Uncharacterized pr	0.490	0.456	0.319	3e-09
UNIPROTKB|Q71X34	209	LMOf2365_2365 "Putative unchar	0.516	0.665	0.268	2.1e-08
TAIR|locus:2040854	280	AT2G34460 [Arabidopsis thalian	0.408	0.392	0.338	1e-06
UNIPROTKB|Q0C053	271	HNE_2194 "Putative uncharacter	0.501	0.498	0.327	1.2e-06
DICTYBASE|DDB_G0275053	305	DDB_G0275053 "nmrA-like family	0.479	0.422	0.304	1.1e-05
UNIPROTKB|F1RK56	299	NMRAL1 "Uncharacterized protei	0.527	0.474	0.307	1.4e-05
UNIPROTKB|E2R512	300	NMRAL1 "Uncharacterized protei	0.550	0.493	0.308	1.9e-05
UNIPROTKB|Q723K4	281	LMOf2365_0474 "Putative ytfG p	0.486	0.466	0.297	2.1e-05
UNIPROTKB|Q48HT9	285	PSPPH_2860 "Uncharacterized pr	0.498	0.470	0.276	2.9e-05

TAIR|locus:2122083 HCF244 "high chlorophyll fluorescence phenotype 244" [Arabidopsis thaliana (taxid:3702)]

 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 167/230 (72%), Positives = 179/230 (77%)

Query:     1 MALRSLPTQLPTRGNLHQPHPHHHMKGSLSWCHXXXXXXXX----XXXANSLGKVCTQQM 56
             MA   LP QL TRGNL   +      G LSW                 ++SL +  +  +
Sbjct:     1 MASLRLPAQLVTRGNLIHHNSSSSSSGRLSWRRSLTPENTIPLFPSSSSSSLNRERSIVV 60

Query:    57 VVKCSAGGGTSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP 116
              V CSA         AVN++PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP
Sbjct:    61 PVTCSAA--------AVNLAPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP 112

Query:   117 RPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALI 176
             RPAPADFLRDWGATVVNADLSKPETIPATLVG+HTVIDCATGRPEEPIK VDWEGKVALI
Sbjct:   113 RPAPADFLRDWGATVVNADLSKPETIPATLVGIHTVIDCATGRPEEPIKTVDWEGKVALI 172

Query:   177 QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRL 226
             QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTE+FLQ+SGL H+ IRL
Sbjct:   173 QCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFLQESGLNHITIRL 222

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0003743 "translation initiation factor activity" evidence=IMP

GO:0010207 "photosystem II assembly" evidence=IMP

UNIPROTKB|Q880Y0 PSPTO_3020 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 155 (59.6 bits), Expect = 3.0e-09, P = 3.0e-09
 Identities = 45/141 (31%), Positives = 70/141 (49%)

Query:    85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
             SILV GATGT+G  + +     G DV+ +VR +P   DF    G T V ADL+   ++  
Sbjct:     2 SILVTGATGTIGSLVTQGLASAGADVKAMVR-QPGKRDFPA--GVTEVVADLTDVSSMRV 58

Query:   145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLM 204
              L  V T+       P+E  + +     +AL   A+  GI++ V+ S+ + D    VP  
Sbjct:    59 ALSSVRTLFLLNAVTPDEVTQAL-----IAL-NLAQEAGIERIVYLSVIHADTFTNVPHF 112

Query:   205 EIKYCTEQFLQDSGLPHVIIR 225
               KY  E+ ++   +P  I+R
Sbjct:   113 TGKYTVERMIESLDIPATILR 133

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q71X34 LMOf2365_2365 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 142 (55.0 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 40/149 (26%), Positives = 74/149 (49%)

Query:    85 SILVVGATGTLGRQIVRR-ALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP 143
             ++LV+GA G +GR +V + A+++G+ VR +VR     ++ L   GA  + ADL K     
Sbjct:     2 NVLVIGANGKIGRLLVEKLAMEKGFFVRAMVRKAEQVSE-LEKLGAKPIIADLKKDFHYA 60

Query:   144 ATLVGVHTVIDCATG--RPEEPIKKVDWEGKVALIQCAKAMGIQKYVF---YSIHNCDKH 198
                +    +    +G   P      +D  G +  I+ AK  G+++++    Y   N +  
Sbjct:    61 YDEIEA-VIFTAGSGGHTPASETINIDQNGAIKAIETAKEKGVRRFIIVSSYGADNPENG 119

Query:   199 PE--VPLMEIKYCTEQFLQDSGLPHVIIR 225
             PE  +  ++ K   ++ L+ SGL + I+R
Sbjct:   120 PESLIHYLKAKQAADEELKRSGLDYTIVR 148

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2040854 AT2G34460 [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 40/118 (33%), Positives = 62/118 (52%)

Query:    81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP-RPAPADFLRDWGATVVNADLSK- 138
             V+   + V GATG  G++IV + L  G+ V+  VR    A   F  D    +V AD+++ 
Sbjct:    44 VKTKKVFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVRADVTEG 103

Query:   139 PETIPATLVGVHT-VIDCATG-RPEEPIK---KVDWEGKVALIQCAKAMGIQKYVFYS 191
             P+ + A ++G  +  + CATG RP   I    KVD  G V L+   +  G++K+V  S
Sbjct:   104 PDKL-AEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVEKFVLVS 160

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

UNIPROTKB|Q0C053 HNE_2194 "Putative uncharacterized protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 133 (51.9 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 52/159 (32%), Positives = 72/159 (45%)

Query:    85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRP-RPAPADFLRDWGATVVNADLSKPETIP 143
             ++LV GATG +G +++ R  D G + R L+R    APA      GA  V ADL  PE++P
Sbjct:     2 TVLVTGATGLVGARLLPRLSDAGVNCRALLRSGSKAPA------GAEAVEADLLNPESLP 55

Query:   144 ATLVGVHTVIDCAT---GRPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHN----- 194
               + GV  +I  A       E+ I K + EG   LI  A+A     +++  S  N     
Sbjct:    56 KAVAGVSAIIHLAAVFRTADEDLIWKSNLEGTRNLIAAAEAHAPDARFILASTSNVYDAD 115

Query:   195 -----CDKHPEVPLMEI---KYCTEQFLQDSGLPHVIIR 225
                  C+     P       K   EQ LQ+SGL   I R
Sbjct:   116 TVRPGCEDDAAEPRQAYPASKLAAEQALQESGLTWSIHR 154

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0275053 DDB_G0275053 "nmrA-like family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 42/138 (30%), Positives = 67/138 (48%)

Query:    84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADFLRDWGATVVNADLSKP-ET 141
             T + V G+TG+ G  + R  L +G+ VR L R P    A  L+  GA +V  D + P E 
Sbjct:     2 TVVTVFGSTGSQGGSVARALLKDGFKVRALTRNPESENAKKLQKEGAEIVKCDDADPKEV 61

Query:   142 IPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK---- 197
             I   L G  +V  C T       K++++   +A    A A G++ +VF  +  C+K    
Sbjct:    62 IEKALKGSDSVF-CVTNFWAYFGKELEYGLNIA--HAALAAGVKHFVFSGLAPCNKISGG 118

Query:   198 HPEVPLMEIKYCTEQFLQ 215
                VP  ++K+  E+ L+
Sbjct:   119 RYNVPHFDLKHKIEEELR 136

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1RK56 NMRAL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 125 (49.1 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 47/153 (30%), Positives = 73/153 (47%)

Query:    86 ILVVGATGTLGRQIVRRALDEG-YDVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIP 143
             ++V GATG  G  + +  L++G + VR + R PR   A  LR  GA VV  D     ++ 
Sbjct:     7 VVVFGATGAQGGSVAQTLLEDGTFRVRVVTRNPRQRAAKELRLQGAEVVQGDQDDEASME 66

Query:   144 ATLVGVHTVIDCATGRPEEPIKKVDW-EGKVALIQCAKAMGIQKYVFYS-IHNCDKHPEV 201
               L G H      T   E   ++ +  +GK+ L   AK +G+ +YV YS + N  K    
Sbjct:    67 GALTGAHAAF-IVTNYWENCSQEQEVKQGKL-LADLAKRLGL-RYVVYSGLENVKKLTAG 123

Query:   202 PL----MEIKYCTEQFLQDSGLPHVIIRLWPYW 230
              L     + K   E++ +D G+P   +RL  Y+
Sbjct:   124 RLAAGHFDGKGEVEEYFRDIGVPMTSVRLPCYF 156

GO:0005730 "nucleolus" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2R512 NMRAL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 124 (48.7 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 49/159 (30%), Positives = 73/159 (45%)

Query:    86 ILVVGATGTLGRQIVRRALDEG-YDVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIP 143
             ++V GATG  G  + R  L++G + VR + R P    A  LR  GA VV  D     ++ 
Sbjct:     8 VVVFGATGAQGGSVARTLLEDGTFRVRVVTRNPGQKAAKELRLQGAEVVQGDQDDEASME 67

Query:   144 ATLVGVHTVIDCATGRPEEPIKKVDW-EGKVALIQCAKAMGIQKYVFYS-IHNCDKHPEV 201
               L G H      T   E   ++ +  +GK+ L   AK +G+  YV YS + N  K    
Sbjct:    68 LALTGAHAAF-IVTNYWENCSQEQEVKQGKL-LANVAKRLGLH-YVVYSGLENIKKLTAG 124

Query:   202 PL----MEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTY 236
              L     + K   EQ+ +D G+P   +RL  Y+    +Y
Sbjct:   125 RLAAGHFDGKGEVEQYFRDIGVPMTSVRLSCYFENLLSY 163

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q723K4 LMOf2365_0474 "Putative ytfG protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 123 (48.4 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 42/141 (29%), Positives = 65/141 (46%)

Query:    87 LVVGATGTLGRQIVR--RALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
             LV GATG LG   +   + L    D+  LVR     AD L+  G  +   D S  E++  
Sbjct:     4 LVTGATGGLGGYALNYLKELVPMSDIYALVRSEEKGAD-LKAAGFNIRVGDYSDAESMKQ 62

Query:   145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLM 204
               VG+  V+   +G P    ++V+ E    ++  AKA G+    + S    DK     L 
Sbjct:    63 AFVGIDRVL-FVSGAPGN--RQVEHEN---VVNAAKAAGVSYIAYTSFAGADKSTSA-LA 115

Query:   205 EIKYCTEQFLQDSGLPHVIIR 225
             E  + TE+ ++ SG+ H  +R
Sbjct:   116 EDHFFTEKVIEKSGIAHTFLR 136

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q48HT9 PSPPH_2860 "Uncharacterized protein" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)]

 Score = 122 (48.0 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 39/141 (27%), Positives = 70/141 (49%)

Query:    86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPR-PAPADFLRDWGATVVNADLSKPETIPA 144
             I+V GATG LGR ++ + L      + +   R P  A+ L   G  V +AD S+P T+ +
Sbjct:     2 IVVTGATGQLGRIVIEQLLTRVPAGQIIAAVRSPEKANDLSAKGIQVRHADYSQPLTLDS 61

Query:   145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLM 204
                G   V+  ++    + + +       A++  AK +G++   + S+ + D    + L 
Sbjct:    62 AFAGADKVLLISSSEVGQRLPQ-----HKAVVDAAKRVGVKLLAYTSVLHADASV-LGLA 115

Query:   205 EIKYCTEQFLQDSGLPHVIIR 225
                  TE +L+ SGLP+V++R
Sbjct:   116 REHRETEDYLRASGLPYVLLR 136

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	269
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	3e-70
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	1e-55
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	2e-22
pfam05368	232	pfam05368, NmrA, NmrA-like family	8e-21
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	3e-20
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	3e-18
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	4e-17
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	9e-17
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	3e-14
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	1e-13
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	3e-13
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	5e-12
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	5e-12
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	3e-11
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	6e-11
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	2e-10
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	2e-10
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	3e-10
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	7e-10
cd05250	214	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical	2e-08
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	3e-08
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	7e-08
cd08946	200	cd08946, SDR_e, extended (e) SDRs	2e-07
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	6e-07
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	1e-06
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	2e-06
PRK05865	854	PRK05865, PRK05865, hypothetical protein; Provisio	3e-06
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	9e-06
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	1e-05
COG2910	211	COG2910, COG2910, Putative NADH-flavin reductase [	1e-05
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	6e-05
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	6e-05
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	7e-05
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	8e-05
pfam08659	181	pfam08659, KR, KR domain	9e-05
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	1e-04
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	2e-04
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-04
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	3e-04
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	3e-04
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	3e-04
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	3e-04
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	4e-04
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	5e-04
pfam02254	116	pfam02254, TrkA_N, TrkA-N domain	5e-04
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	6e-04
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	8e-04
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.001
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	0.001
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	0.001
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	0.002
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	0.002
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	0.002
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	0.002
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	0.003
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	0.004
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	0.004
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	0.004

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score =  218 bits (558), Expect = 3e-70
 Identities = 78/144 (54%), Positives = 108/144 (75%), Gaps = 3/144 (2%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           S+LV+GATGTLGRQIVR+ALDEGY VRCLVR     A FL++WGA +V  DLS PET+P 
Sbjct: 2   SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK-ASFLKEWGAELVYGDLSLPETLPP 60

Query: 145 TLVGVHTVIDCATGRPEEP--IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
           +  GV  +ID +T RP +    K++DW+GK+ALI+ AKA  I++++F+SI N +++P +P
Sbjct: 61  SFKGVTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYPYIP 120

Query: 203 LMEIKYCTEQFLQDSGLPHVIIRL 226
           LM++K   EQ L+ SG+P+ I RL
Sbjct: 121 LMKLKSDIEQKLKKSGIPYTIFRL 144

Length = 317

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score =  177 bits (451), Expect = 1e-55
 Identities = 57/148 (38%), Positives = 81/148 (54%), Gaps = 8/148 (5%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
            +LVVGATG +GR +VR  LD GY VR LVR  P+ A+ L   GA VV  DL+  E++ A
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRD-PSQAEKLEAAGAEVVVGDLTDAESLAA 59

Query: 145 TLVGVHTVIDCATGRPEEP--IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPE-- 200
            L G+  VI  A    +     + VD++G + LI  AK  G++++V  S    DK     
Sbjct: 60  ALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHPL 119

Query: 201 ---VPLMEIKYCTEQFLQDSGLPHVIIR 225
               P ++ K   E +L+ SGL + I+R
Sbjct: 120 EALGPYLDAKRKAEDYLRASGLDYTIVR 147

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 55/147 (37%), Positives = 75/147 (51%), Gaps = 11/147 (7%)

Query: 86  ILVVGATGTLGRQIVRRAL-DEGYDVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIP 143
           ILV GATG  G  +VR  L D G+ VR L R P    A  L   G  VV  DL  PE++ 
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGVEVVQGDLDDPESLE 60

Query: 144 ATLVGVHTV---IDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-HP 199
           A L GV+ V    D      E+ I     +GK  ++  AK  G+Q +VF S+ + +K   
Sbjct: 61  AALKGVYGVFLVTDFWEAGGEDEI----AQGK-NVVDAAKRAGVQHFVFSSVPDVEKLTL 115

Query: 200 EVPLMEIKYCTEQFLQDSGLPHVIIRL 226
            VP  + K   E++++ SGLP  I+R 
Sbjct: 116 AVPHFDSKAEVEEYIRASGLPATILRP 142

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 87.7 bits (218), Expect = 8e-21
 Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 17/149 (11%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIPA 144
           ILV GATG  G  +VR +L  G+ VR LVR P+   A  L+  G  +V  DL   E++  
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVELVEGDLDDHESLVE 60

Query: 145 TLVGVHTVIDCATG---RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH--- 198
            L GV  V    TG     E    K        L   AK  G++ ++     N       
Sbjct: 61  ALKGVDVVF-SVTGFWLSKEIEDGK-------KLADAAKEAGVKHFIPSEFGNDVDRSNG 112

Query: 199 --PEVPLMEIKYCTEQFLQDSGLPHVIIR 225
             P VP  + K   E++++  G+P+  + 
Sbjct: 113 VEPAVPHFDSKAEVERYIRALGIPYTFVY 141

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 85.1 bits (211), Expect = 3e-20
 Identities = 43/151 (28%), Positives = 61/151 (40%), Gaps = 21/151 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I V+GATG  GR++V+  L  G+ V  L R            G T V  DL     +   
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAPAP----GVTPVQKDLFDLADLAEA 56

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI--HNCDKHPEVPL 203
           L GV  V+D    RP+      D +G   L+  A   G+++ V  S      D+     L
Sbjct: 57  LAGVDAVVDAFGARPD------DSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTFRL 110

Query: 204 MEI---------KYCTEQFLQDSGLPHVIIR 225
            +          K   E+ L+ SGL   I+R
Sbjct: 111 DDAPLFPPYARAKAAAEELLRASGLDWTIVR 141

Length = 182

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 81.5 bits (202), Expect = 3e-18
 Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIPA 144
           ILV GATG LG  +V   L +   V  LVR P  A A      G  V   D   PET+  
Sbjct: 1   ILVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAAD--GVEVRQGDYDDPETLER 58

Query: 145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLM 204
              GV  ++  +    E+ I++         I  AK  G++  V+ S    D+     L 
Sbjct: 59  AFEGVDRLLLISPSDLEDRIQQHK-----NFIDAAKQAGVKHIVYLSASGADEDSPFLLA 113

Query: 205 EIKYCTEQFLQDSGLPHVIIR 225
                TE++L+ SG+P+ I+R
Sbjct: 114 RDHGATEKYLEASGIPYTILR 134

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 76.3 bits (188), Expect = 4e-17
 Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 10/149 (6%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           IL++GATG +GR + R  L++G++V  LVR               VV  DL   +++   
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVR-NTKRLSKEDQEPVAVVEGDLRDLDSLSDA 59

Query: 146 LVGVHTVIDCATGRPE-EPIKKVDWEGKVALIQCAKAMGIQKYVFYS--------IHNCD 196
           + GV  VI  A    +     +VD EG   +++ AK  G++ ++F S            +
Sbjct: 60  VQGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAYGDLHEETE 119

Query: 197 KHPEVPLMEIKYCTEQFLQDSGLPHVIIR 225
             P  P + +K  TE  L+++ LP+ I+R
Sbjct: 120 PSPSSPYLAVKAKTEAVLREASLPYTIVR 148

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 77.6 bits (191), Expect = 9e-17
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 6/142 (4%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILV GATG +G  +VR  L  G++VR  VR  P  A  L   G  VV  DL  P+++ A 
Sbjct: 3   ILVTGATGFVGGAVVRELLARGHEVRAAVR-NPEAAAALAG-GVEVVLGDLRDPKSLVAG 60

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKA--MGIQKYVFYSIHNCDKHPEVPL 203
             GV  V+   +G  +        +   A+++ A+A   G++  V  S+   D      L
Sbjct: 61  AKGVDGVL-LISGLLDGSDAFRAVQV-TAVVRAAEAAGAGVKHGVSLSVLGADAASPSAL 118

Query: 204 MEIKYCTEQFLQDSGLPHVIIR 225
              K   E  L+ SG+P+  +R
Sbjct: 119 ARAKAAVEAALRSSGIPYTTLR 140

Length = 275

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 69.6 bits (171), Expect = 3e-14
 Identities = 41/155 (26%), Positives = 62/155 (40%), Gaps = 17/155 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I ++GATG  G  IVR AL  G++V  LVR  PA           VV  D+   E +   
Sbjct: 2   IAIIGATGRTGSAIVREALARGHEVTALVR-DPA-KLPAEHEKLKVVQGDVLDLEDVKEA 59

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVF----YSIHNCDKH--- 198
           L G   VI     R +     +  EG   ++   KA G+++ +      S+ +  K    
Sbjct: 60  LEGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGAGSLDDRPKVTLV 119

Query: 199 ---PEVP-----LMEIKYCTEQFLQDSGLPHVIIR 225
                 P     + E      + L++SGL    +R
Sbjct: 120 LDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVR 154

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 21/150 (14%)

Query: 85  SILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
            I + GATGTLG  IV  AL    G+ V  L RP    ++  +  G  VV  D +  E++
Sbjct: 1   KIAIAGATGTLGGPIVS-ALLASPGFTVTVLTRPSSTSSNEFQPSGVKVVPVDYASHESL 59

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYV---F---YSIHNCD 196
            A L GV  VI  A G      +         LI  A A G+++++   F   Y      
Sbjct: 60  VAALKGVDAVI-SALGGAAIGDQLK-------LIDAAIAAGVKRFIPSEFGVDYDRI--G 109

Query: 197 KHPEVPLMEIKYCTEQFLQDS--GLPHVII 224
             P + L + K    ++L+    GLP   +
Sbjct: 110 ALPLLDLFDEKRDVRRYLRAKNAGLPWTYV 139

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 67.7 bits (166), Expect = 3e-13
 Identities = 41/148 (27%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG----ATVVNADLSKPET 141
           + V GATG +GR +V R    G  V    R   A A  L   G       V  DL   E+
Sbjct: 3   VTVFGATGFIGRYVVNRLAKRGSQVIVPYR-CEAYARRLLVMGDLGQVLFVEFDLRDDES 61

Query: 142 IPATLVGVHTVIDCATGRPEEP----IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK 197
           I   L G   VI+   GR  E      + V  EG   L + AK  G+++ +  S    D 
Sbjct: 62  IRKALEGSDVVINLV-GRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHISALGADA 120

Query: 198 HPEVPLMEIKYCTEQFLQDSGLPHVIIR 225
           +     +  K   E+ ++++     I+R
Sbjct: 121 NSPSKYLRSKAEGEEAVREAFPEATIVR 148

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 64.6 bits (157), Expect = 5e-12
 Identities = 49/169 (28%), Positives = 70/169 (41%), Gaps = 30/169 (17%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILV G  G +G  +V R L  G+DVR L R R    D L   G   V  DL+  + +   
Sbjct: 3   ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRD-GLDPLLS-GVEFVVLDLTDRDLVDEL 60

Query: 146 LVGVH-TVIDCA---TGRPEEPIKKVDW-----EGKVALIQCAKAMGIQKYVFYSIHNC- 195
             GV   VI  A   +          ++     +G + L++ A+A G++++VF S  +  
Sbjct: 61  AKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVV 120

Query: 196 -----------DKHPEVPL---MEIKYCTEQFLQD----SGLPHVIIRL 226
                      D  P  PL      K   EQ L+      GLP VI+R 
Sbjct: 121 YGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRP 169

Length = 314

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 64.3 bits (157), Expect = 5e-12
 Identities = 30/68 (44%), Positives = 38/68 (55%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           +LV GATG +G ++V R L EG+ VR LVR     AD       TVV  DL  PE++ A 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLADRPWSERVTVVRGDLEDPESLRAA 60

Query: 146 LVGVHTVI 153
           L G+ T  
Sbjct: 61  LEGIDTAY 68

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 62.5 bits (152), Expect = 3e-11
 Identities = 48/218 (22%), Positives = 84/218 (38%), Gaps = 19/218 (8%)

Query: 25  MKGSLSWCHTLTPLPLLSPSA--NSLGKVCTQQMVVKCSAGGGTSGTVQAVNMSPGTPVR 82
              S  +          SPS    +       +     S G   +    A +     P +
Sbjct: 1   HLSSSLFSLRAAAAASSSPSNRLAASLGGALVRRAAAASRGSRATAAAAAQSFRSKEP-K 59

Query: 83  PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP------RPAPADFLRDW-GATVVNAD 135
             ++LVVGATG +G+ +VR  +  GY+V  + R       +    D  ++  GA VV  D
Sbjct: 60  DVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGD 119

Query: 136 LSKPETIPATL----VGVHTVIDCATGRP--EEPIKKVDWEGKVALIQCAKAMGIQKYVF 189
           ++  +++   L      V  V+ C   R    +   K+D++     +   + +G + +V 
Sbjct: 120 VTDADSLRKVLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVL 179

Query: 190 YSIHNCDKHPEVPLMEIKYCTEQFLQ--DSGLPHVIIR 225
            S   C + P +     K   E  LQ  DS   + I+R
Sbjct: 180 LSAI-CVQKPLLEFQRAKLKFEAELQALDSDFTYSIVR 216

Length = 390

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 61.1 bits (149), Expect = 6e-11
 Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILV GATG LG  +VR  L +GY VR LVR   + A  L      VV  DL+   ++ A 
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRS-GSDAVLLDGLPVEVVEGDLTDAASLAAA 59

Query: 146 LVGVHTVIDCA------TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
           + G   V   A          +E + + + EG   ++  A   G+++ V  S
Sbjct: 60  MKGCDRVFHLAAFTSLWAKDRKE-LYRTNVEGTRNVLDAALEAGVRRVVHTS 110

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 60.0 bits (146), Expect = 2e-10
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 8/111 (7%)

Query: 87  LVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL 146
           LV GATG +G  +VR  L++G +VR LVRP  +    L      +V  DL  P ++   +
Sbjct: 4   LVTGATGFVGSAVVRLLLEQGEEVRVLVRP-TSDRRNLEGLDVEIVEGDLRDPASLRKAV 62

Query: 147 VGVHTVIDCA------TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
            G   +   A         PEE +   + EG   L++ A   G+++ V+ S
Sbjct: 63  AGCRALFHVAADYRLWAPDPEE-MYAANVEGTRNLLRAALEAGVERVVYTS 112

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 59.1 bits (143), Expect = 2e-10
 Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 6/142 (4%)

Query: 86  ILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           I V GATG  G  ++R  L +G   VR +VR     A  L D G  V   D ++PE +  
Sbjct: 1   IAVTGATGQQGGSVIRHLLAKGASQVRAVVR-NVEKAATLADQGVEVRQGDYNQPELLQK 59

Query: 145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLM 204
              G   +        +  ++    +GK  +   A+  G+ K+++ + +   +   +PL 
Sbjct: 60  AFAGASKLFIITGPHYDNTLEIK--QGK-NVADAARRAGV-KHIYSTGYAFAEESAIPLA 115

Query: 205 EIKYCTEQFLQDSGLPHVIIRL 226
            +K   E  ++ +G+P+  +R 
Sbjct: 116 HVKLAVEYAIRTTGIPYTFLRN 137

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 58.9 bits (143), Expect = 3e-10
 Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 5/142 (3%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILV GATG +G ++    L+ G  VR LVR     A  L   GA VV  DL  P  + A 
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRPVRALVR-SDERAAALAARGAEVVVGDLDDPAVLAAA 59

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALI--QCAKAMGIQKYVFYSIHNCDKHPEVPL 203
           L GV  V   A   P    +      + A       +  G+++ V  S    D      L
Sbjct: 60  LAGVDAVFFLAPPAPTADAR--PGYVQAAEAFASALREAGVKRVVNLSSVGADPESPSGL 117

Query: 204 MEIKYCTEQFLQDSGLPHVIIR 225
           +   +  EQ L  +GLP V +R
Sbjct: 118 IRGHWLMEQVLNWAGLPVVHLR 139

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 57.3 bits (139), Expect = 7e-10
 Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 13/116 (11%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILV G TG +G  +VRR L EGY+V  L R R + +  L          DL+ P+ +   
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSES--LNTGRIRFHEGDLTDPDALERL 58

Query: 146 L--VGVHTVIDCA--------TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
           L  V    VI  A           P + I + +  G + L++ A+  G++++VF S
Sbjct: 59  LAEVQPDAVIHLAAQSGVGASFEDPADFI-RANVLGTLRLLEAARRAGVKRFVFAS 113

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 11/149 (7%)

Query: 84  TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPET 141
            + LV+GATG +G+ ++R  L   Y   V  +VR R       ++    +V       E 
Sbjct: 1   KTALVLGATGLVGKHLLRELLKSPYYSKVTAIVR-RKLTFPEAKEKLVQIVVDFERLDE- 58

Query: 142 IPATLVGVHTVIDCATGRP------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC 195
                     V  C  G        +E  +KVD +  + L + AKA G+Q ++  S    
Sbjct: 59  -YLEAFQNPDVGFCCLGTTRKKAGSQENFRKVDHDYVLKLAKLAKAAGVQHFLLVSSLGA 117

Query: 196 DKHPEVPLMEIKYCTEQFLQDSGLPHVII 224
           D       +++K   E+ LQ  G   + I
Sbjct: 118 DPKSSFLYLKVKGEVERDLQKLGFERLTI 146

Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 53.5 bits (129), Expect = 3e-08
 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 16/116 (13%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
            +LV GA G +GR +V + L  G +VR  VR     A+       +VV A+L   ++   
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVR-NAENAE------PSVVLAELPDIDSFTD 53

Query: 145 TLVGVHTVIDCA---------TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
             +GV  V+  A            P    +KV+ E    L + A   G++++VF S
Sbjct: 54  LFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVFLS 109

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 52.0 bits (125), Expect = 7e-08
 Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 36/175 (20%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP--------APADFLRDWGATVVNADLS 137
           + V G TG LGR +V+R L+ G+ V  LVR             A    D    V+  DL+
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEAD-RVRVLEGDLT 59

Query: 138 KP------ETIPATLVGVHTVIDCA----TGRPEEPIKKVDWEGKVALIQCAKAMGIQKY 187
           +P               V  VI CA       P E   + + +G   +++ A  + IQ++
Sbjct: 60  QPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQRF 119

Query: 188 VFYS-----------IHNCDKHPEVPLM----EIKYCTEQFLQDSG--LPHVIIR 225
            + S           I   + +P         + K   EQ ++ +   +P  + R
Sbjct: 120 HYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRAAATQIPLTVYR 174

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 45/159 (28%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILV G  G +G  +VRR L+ G++V  +            D    VV+          A 
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVI------------DRLDVVVHL---------AA 39

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS----------IHNC 195
           LVGV      +   P+E   + +  G + L++ A+  G++++V+ S          +   
Sbjct: 40  LVGV----PASWDNPDE-DFETNVVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPEE 94

Query: 196 DKHPEVP--------LMEIKYCTEQFLQDSGLPHVIIRL 226
           ++ P  P        L         + +  GLP VI+RL
Sbjct: 95  EETPPRPLSPYGVSKLAAEHLL-RSYGESYGLPVVILRL 132

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 49.4 bits (118), Expect = 6e-07
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 17/141 (12%)

Query: 85  SILVVGATGTLGRQIVRRALDE-GYDVRCL-VRPRPAPADFLRDWGATVVNADLSKPETI 142
           S+LV G +G  G ++V++ L+  G  VR   + P        +      +  D++    +
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEFLKGDITDRNDV 60

Query: 143 PATLVGVHTVIDCA----TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS------- 191
              L G   V   A       P +   +V+  G   ++   +  G+QK+V+ S       
Sbjct: 61  EQALSGADCVFHTAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSSSSVIFG 120

Query: 192 ---IHN-CDKHPEVPLMEIKY 208
              IHN  +  P  PL    Y
Sbjct: 121 GQNIHNGDETLPYPPLDSDMY 141

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 84  TSILVVGATGTLGRQIVRRALDEGYDVRCLVRP-RPAPADFLRDWGATVVNADLSK--PE 140
            ++ V GATG  G++IV + L +G+ V+  VR    A     +D    +V AD+++   +
Sbjct: 18  KTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDK 77

Query: 141 TIPATLVGVHTVIDCATG-RPE-EPIK--KVDWEGKVALIQCAKAMGIQKYVFYS 191
            + A       VI CATG R   +P    KVD  G V L++  +  G+ +++  S
Sbjct: 78  LVEAIGDDSDAVI-CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVS 131

Length = 251

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           + V GATG +G  +VR  +  G++V  L R   A A  L   GA V   DL   + +   
Sbjct: 3   VFVTGATGFIGSAVVRELVAAGHEVVGLAR-SDAGAAKLEAAGAQVHRGDLEDLDILRKA 61

Query: 146 LVGVHTVIDCA 156
                 VI  A
Sbjct: 62  AAEADAVIHLA 72

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|235630 PRK05865, PRK05865, hypothetical protein; Provisional

 Score = 47.7 bits (113), Expect = 3e-06
 Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 26/144 (18%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP----APADFLRDWGATVVNADLSKPET 141
           I V GA+G LGR +  R L +G++V  + R RP    + ADF        + AD+     
Sbjct: 3   IAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWPSSADF--------IAADIRDATA 54

Query: 142 IPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEV 201
           + + + G   V  CA  R       ++ +G   +++     G  + VF            
Sbjct: 55  VESAMTGADVVAHCAWVR--GRNDHINIDGTANVLKAMAETGTGRIVF---------TSS 103

Query: 202 PLMEIKYCTEQFLQDSGLPHVIIR 225
                +   EQ L D GL  V +R
Sbjct: 104 GH---QPRVEQMLADCGLEWVAVR 124

Length = 854

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 45.8 bits (109), Expect = 9e-06
 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 10/115 (8%)

Query: 87  LVVGATGTLGRQIVRRALDEG--YDVRCL-VRPRPAPADFLRDWG-ATVVNADLSKPETI 142
           LV G  G LGR IVR  L EG   +VR   +R  P   +        T +  D++  + +
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITYIEGDVTDKQDL 60

Query: 143 PATLVGVHTVI------DCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
              L G   VI      D       + I KV+ +G   ++      G++  V+ S
Sbjct: 61  RRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTS 115

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           +  V+GA+G +GR++ R     G+DVR + R     A      G  +V AD     ++ A
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLA---WLPGVEIVAADAMDASSVIA 57

Query: 145 TLVGVHTVIDCA 156
              G   +  CA
Sbjct: 58  AARGADVIYHCA 69

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 4/102 (3%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I ++GA+G  G +I++ AL  G++V  +VR     +      G T++  D+    ++ + 
Sbjct: 3   IAIIGASGKAGSRILKEALKRGHEVTAIVR---NASKLAARQGVTILQKDIFDLTSLASD 59

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKY 187
           L G   VI        +  +      + ALI+  K  G+ + 
Sbjct: 60  LAGHDAVISAFGAGASDNDELHSKSIE-ALIEALKGAGVPRL 100

Length = 211

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 26/148 (17%)

Query: 85  SILVVGATGTLGRQIVRRALDEG------YDVRCLVRPRPAPADFLRDWGATVVNADLSK 138
           S LVVG +G LGR +V + L  G      +D+R      P+ +             DL+ 
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSSSG-----RVQFHTGDLTD 55

Query: 139 PETI-PA-TLVGVHTVIDCAT---GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS-- 191
           P+ +  A    G + V   A+   G  ++   KV+ +G   +I+  +  G++K V+ S  
Sbjct: 56  PQDLEKAFNEKGPNVVFHTASPDHGSNDDLYYKVNVQGTRNVIEACRKCGVKKLVYTSSA 115

Query: 192 --------IHNCDKHPEVPLMEIKYCTE 211
                   I N D+    P        E
Sbjct: 116 SVVFNGQDIINGDESLPYPDKHQDAYNE 143

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 42.2 bits (100), Expect = 6e-05
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 19/103 (18%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLV---RPRPAP-----ADFLRDWGA--TVVNA 134
           ++L+ G TG LG  + R    EG   R LV   R  PAP        L   GA  TV   
Sbjct: 2   TVLITGGTGGLGLALARWLAAEG--ARHLVLVSRRGPAPGAAELVAELEALGAEVTVAAC 59

Query: 135 DLSKPE-------TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
           D++  +        +PA L  +  V+  A    + P++++  E
Sbjct: 60  DVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPE 102

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 42.9 bits (102), Expect = 7e-05
 Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 18/120 (15%)

Query: 88  VVGATGTLGRQIVRRALDEGYDVRCLVR--PRPAPADFLRDW-GA----TVVNADLSKPE 140
           V GA+G +G  +V+R L  GY VR  VR          L +  GA     +  ADL    
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADLLDYG 62

Query: 141 TIPATLVGVHTV------IDCATGRPEEPIKKVDWEGKVA---LIQCAKAMGIQKYVFYS 191
           +  A + G   V      +D  +  PEE +  ++   K     L  CAKA  +++ VF S
Sbjct: 63  SFDAAIDGCDGVFHVASPVDFDSEDPEEEM--IEPAVKGTLNVLEACAKAKSVKRVVFTS 120

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 9/114 (7%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
            +L+VG  G +G  +V   L+EG  VR  V  R  P   L   G   +  D      + +
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVR--VFDRSIPPYELPLGGVDYIKGDYENRADLES 58

Query: 145 TLVGVHTVIDCATG---RPEEPIKKVDWEGKV-ALIQCAKAM---GIQKYVFYS 191
            LVG+ TVI  A+            +D +  V   +Q  +A    GI K +F S
Sbjct: 59  ALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFAS 112

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 41.7 bits (99), Expect = 9e-05
 Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 20/104 (19%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLV------RPRPAPADFLRDW---GATV--VN 133
           + LV G  G LG ++ R   + G   R LV       P P     L +    GA V  V 
Sbjct: 2   TYLVTGGLGGLGLELARWLAERG--ARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVA 59

Query: 134 ADLSKPE-------TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
            D+S  +        I A    +  VI  A    +  +  +  E
Sbjct: 60  CDVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAE 103

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 32/139 (23%), Positives = 47/139 (33%), Gaps = 35/139 (25%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVR--CLVR-----------PRPAPADFLRDWGA-- 129
           ++L+ GATG LG  ++R  L      +  CLVR                   L  W    
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELE 60

Query: 130 ----TVVNADLSKP---------ETIPATLVGVHTVIDCATGR----PEEPIKKVDWEGK 172
                VV  DLSKP         + +      V  +I          P E +K  +  G 
Sbjct: 61  LSRIKVVVGDLSKPNLGLSDDDYQELAEE---VDVIIHNGANVNWVYPYEELKPANVLGT 117

Query: 173 VALIQCAKAMGIQKYVFYS 191
             L++ A    ++   F S
Sbjct: 118 KELLKLAATGKLKPLHFVS 136

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 15/120 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRP--RPAPADFLRDWGA-----TVVNADLSK 138
           +LV GA+G +   +V + L+ GY VR  VR   +    + L D  A      +  ADL+ 
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60

Query: 139 PETIPATLVG------VHTVIDCATGRPEEPIKKVDWEGKVALIQ-CAKAMGIQKYVFYS 191
            ++    + G      V T +  ++  P E IK     G +  ++  A A  ++++V  S
Sbjct: 61  EQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKP-AIGGTLNALKAAAAAKSVKRFVLTS 119

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 16/113 (14%)

Query: 87  LVVGATGTLGRQIVRRAL--DEGYDVRCLVRPRPAP--ADFLRDWGA---TVVNADLSKP 139
            V G TG +GR++V R L       V  LVR +           WGA     +  DL++P
Sbjct: 4   FVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEP 63

Query: 140 -----ETIPATLVGVHTVIDCAT----GRPEEPIKKVDWEGKVALIQCAKAMG 183
                E   A L  +  V+  A        EE  +  + +G   +++ A+ + 
Sbjct: 64  GLGLSEADIAELGDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ 116

Length = 657

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 41/192 (21%), Positives = 66/192 (34%), Gaps = 54/192 (28%)

Query: 88  VVGATGTLGRQIVRRALD--EGYDVRCLVRPRP--APAD-----------FLRDWGA--- 129
           + GATG LG+ ++ + L       + CLVR +   +  +           F R       
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 130 TVVNADLSKP------ETIPATLVG-VHTVIDCA----TGRPEEPIKKVDWEGKVALIQC 178
             V  DLS+P      E     L   V  +I  A       P   ++  +  G   +++ 
Sbjct: 61  IPVAGDLSEPNLGLSDEDF-QELAEEVDVIIHNAATVNFVEPYSDLRATNVLGTREVLRL 119

Query: 179 AKAMGIQKYVFYS--IHNCDKHPEV-----PLMEI---------------KYCTEQFLQD 216
           AK M    +   S    N ++   +      L E                K+  EQ +++
Sbjct: 120 AKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLAEQLVRE 179

Query: 217 --SGLPHVIIRL 226
              GLP VI R 
Sbjct: 180 AAGGLPVVIYRP 191

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 16/34 (47%), Positives = 21/34 (61%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA 119
           IL+ GATG LGR +VR   + GY+V    R R +
Sbjct: 2   ILITGATGMLGRALVRLLKERGYEVIGTGRSRAS 35

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 17/102 (16%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-----ADFLRDWG---ATVVNADLS 137
            LV GA+  +GR I R    EG  V    R          A  +++ G   A  V AD+S
Sbjct: 8   ALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVS 67

Query: 138 KP--------ETIPATLVGVHTVIDCA-TGRPEEPIKKVDWE 170
                              +  +++ A    P+ P++++  E
Sbjct: 68  DDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEE 109

Length = 251

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNAD 135
            IL++G T  +G+ +V   L  G+DV    R R    D     G   +  D
Sbjct: 2   KILIIGGTRFIGKALVEELLAAGHDVTVFNRGR-TKPDLPE--GVEHIVGD 49

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 41/175 (23%), Positives = 66/175 (37%), Gaps = 42/175 (24%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCL----------VRPRPAPADFLRDWGATVVNAD 135
           +LV G  G +G  +V R L+ G++V  L          +        F        +  D
Sbjct: 2   VLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEVKPNVKF--------IEGD 53

Query: 136 LSKPETIPATLVGVHTVIDCAT--GRP---EEPIKKVDWE--GKVALIQCAKAMGIQKYV 188
           +   E +     GV  V   A     P   E+PIK  +    G + L++ A+  G++++V
Sbjct: 54  IRDDELVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKRFV 113

Query: 189 FYSIHNC-DKHPEVPLME------------IKYCTEQFLQ----DSGLPHVIIRL 226
           + S  +     P +P  E             KY  E + Q      GLP V +R 
Sbjct: 114 YASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLRY 168

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 24/114 (21%), Positives = 36/114 (31%), Gaps = 7/114 (6%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA- 144
           ILV GA G LGR + RR       +      R  P           V  D+  P      
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRPP--GSPPKVEYVRLDIRDPAAADVF 58

Query: 145 TLVGVHTVIDCAT----GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN 194
                  V+  A      R      +++ +G   ++    A G+ + V  S   
Sbjct: 59  REREADAVVHLAFILDPPRDGAERHRINVDGTQNVLDACAAAGVPRVVVTSSVA 112

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|216949 pfam02254, TrkA_N, TrkA-N domain

 Score = 38.3 bits (90), Expect = 5e-04
 Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 26/139 (18%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI-PA 144
           I+++G  G +GR +     + G DV  ++   P   + LR+ G  VV  D +  E +  A
Sbjct: 1   IIIIGY-GRVGRSLAEELREGGPDVV-VIDKDPERVEELREEGVPVVVGDATDEEVLEEA 58

Query: 145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLM 204
            +     V+  ATG  E           + ++  A+ +  +  +    ++  +H      
Sbjct: 59  GIEEADAVV-AATGDDEA---------NILIVLLARELNPKLKIIARAND-PEH------ 101

Query: 205 EIKYCTEQFLQDSGLPHVI 223
                  + L+  G   VI
Sbjct: 102 ------AELLRRLGADEVI 114

This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD. Length = 116

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 24/101 (23%), Positives = 35/101 (34%), Gaps = 14/101 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADFLRDWGATVVNADLSKPE---- 140
            LV GA+  +G +I R    +GY V   +R P    A          V  D   PE    
Sbjct: 3   ALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGGDVEAVPYDARDPEDARA 62

Query: 141 ---TIPATLVGVHTVIDCA-TGRPEEPIKKVDWEGKVALIQ 177
               +      +  ++  A  GRP         EG  A ++
Sbjct: 63  LVDALRDRFGRIDVLVHNAGIGRPTTLR-----EGSDAELE 98

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDV 110
           I+V+GATGT+G  + +     G++V
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEV 25

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 23/79 (29%), Positives = 26/79 (32%), Gaps = 9/79 (11%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-RDWGAT-----VVNADLSK 138
             LV GA   LGR I  R    G DV    R     A+ L     A       V AD++ 
Sbjct: 8   VALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD 67

Query: 139 PET---IPATLVGVHTVID 154
                   A  V     ID
Sbjct: 68  KAALEAAVAAAVERFGRID 86

Length = 249

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 43/173 (24%), Positives = 64/173 (36%), Gaps = 52/173 (30%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI--- 142
           IL+ GA G LGR++V++   EG  V  L R +                 DL+ PE +   
Sbjct: 2   ILITGANGQLGRELVQQLSPEGRVVVALTRSQ----------------LDLTDPEALERL 45

Query: 143 -----PATLV--GVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQ------KYVF 189
                P  +V    +T +D A   PE+    V+      L + A   G +       YVF
Sbjct: 46  LRAIRPDAVVNTAAYTDVDGAESDPEKAFA-VNALAPQNLARAAARHGARLVHISTDYVF 104

Query: 190 YSIHNCDKHPEVPLME------------IKYCTEQFLQDSGLPHVIIRL-WPY 229
                 D   + P  E             K   EQ ++ +G   +I+R  W Y
Sbjct: 105 ------DGEGKRPYREDDATNPLNVYGQSKLAGEQAVRAAGPNALIVRTSWLY 151

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVV 132
            L+ G    +GR +V R L EG  V  L R        LR  +G  V+
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARVAVLER-SAEKLASLRQRFGDHVL 55

Length = 263

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 4/56 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADF---LRDWGATVVNADLS 137
           IL+ G TG +GR + +R    G++V  L R P P         + W     ++   
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTKWEGYKPWAGEDADSLEG 56

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR 115
           +LV GATG +   IV + L  GY VR  VR
Sbjct: 2   VLVTGATGFIASHIVEQLLKAGYKVRGTVR 31

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 24/126 (19%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPR------------PAPADFLRDWGATVV 132
           ++ V GA+G +G  +V R L+ GY VR  VR              P     L  W     
Sbjct: 7   TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLW----- 61

Query: 133 NADLSKPETIPATLVG------VHTVIDCATGRPEEPIKKVDWEGKVALIQ-CAKAMGIQ 185
            ADL+   +    + G      V T +D  +  PE  + K    G +++++ CAKA  ++
Sbjct: 62  KADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVR 121

Query: 186 KYVFYS 191
           + VF S
Sbjct: 122 RIVFTS 127

Length = 351

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 25/119 (21%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLV-----RPRPAPADFLRDWG--ATVVNADLSK 138
            L+ GA+  +G ++ ++    GY++  LV     +      +     G    V+ ADLS 
Sbjct: 9   ALITGASSGIGAELAKQLARRGYNL-ILVARREDKLEALAKELEDKTGVEVEVIPADLSD 67

Query: 139 PETIP-------ATLVGVHTVIDCA-TGRPEEPIKKVDWEGK--------VALIQCAKA 181
           PE +             +  +++ A  G    P  ++  + +        +AL +  KA
Sbjct: 68  PEALERLEDELKERGGPIDVLVNNAGFGTF-GPFLELSLDEEEEMIQLNILALTRLTKA 125

Length = 265

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           +L+VGA+  +GR+ VR+   +G+ V    R   A    L+  GA  +  D++ P ++  
Sbjct: 4   VLIVGASRGIGREFVRQYRADGWRVIATAR-DAAALAALQALGAEALALDVADPASVAG 61

Length = 222

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 5/70 (7%)

Query: 82  RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKP 139
           RPT+ L+ GA+  +G  I R  L   + +    RP     D L     GAT    DL+ P
Sbjct: 3   RPTA-LITGASRGIGAAIARE-LAPTHTLLLGGRP-AERLDELAAELPGATPFPVDLTDP 59

Query: 140 ETIPATLVGV 149
           E I A +  +
Sbjct: 60  EAIAAAVEQL 69

Length = 227

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 47/171 (27%), Positives = 63/171 (36%), Gaps = 48/171 (28%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           ILV GA G LGR++ R   + G +V  L RP                  DL+ PE + A 
Sbjct: 1   ILVTGANGQLGRELTRLLAERGVEVVALDRPE----------------LDLTDPEAVAAL 44

Query: 146 L------VGVH----TVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGI------QKYVF 189
           +      V V+    T +D A   PE     V+  G   L +   A G         YVF
Sbjct: 45  VREARPDVVVNAAAYTAVDKAESEPELAY-AVNALGPGNLAEACAARGAPLIHISTDYVF 103

Query: 190 -------YSIHNCDKHPEVPLM---EIKYCTEQFLQDSGLPHVIIRL-WPY 229
                  Y     +  P  PL      K   EQ +  +   H+I+R  W Y
Sbjct: 104 DGAKGGPY----REDDPTGPLNVYGRTKLAGEQAVLAANPRHLILRTAWVY 150

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score = 37.6 bits (87), Expect = 0.004
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 13/130 (10%)

Query: 75  MSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR-----PRPAPADFLRDWG- 128
           M+  TP    +  V+G TG L   +++  L +GY V   VR      + A    L++ G 
Sbjct: 1   MATLTPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGD 60

Query: 129 ATVVNADLSKPETIPATLVG------VHTVIDCATGRPEEPIKKVDWEGKVALIQ-CAKA 181
             +  ADL+  E+  A + G      V T ++ A+  PE  + K   +G   +++ CAKA
Sbjct: 61  LKIFGADLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKA 120

Query: 182 MGIQKYVFYS 191
             +++ +  S
Sbjct: 121 KSVKRVILTS 130

Length = 338

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	269
CHL00194	317	ycf39 Ycf39; Provisional	99.95
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.95
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.94
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.94
PLN02572	442	UDP-sulfoquinovose synthase	99.93
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.93
PLN02427	386	UDP-apiose/xylose synthase	99.93
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.92
PLN00198	338	anthocyanidin reductase; Provisional	99.92
PLN03209	576	translocon at the inner envelope of chloroplast su	99.92
PLN02214	342	cinnamoyl-CoA reductase	99.92
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.92
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.92
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.92
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.92
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.92
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.91
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.91
PLN02650	351	dihydroflavonol-4-reductase	99.91
PLN02686	367	cinnamoyl-CoA reductase	99.91
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.91
PLN02583	297	cinnamoyl-CoA reductase	99.91
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.9
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.9
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.9
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.89
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.89
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.89
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.89
PLN00016	378	RNA-binding protein; Provisional	99.89
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.89
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.88
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.88
PLN02206	442	UDP-glucuronate decarboxylase	99.88
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.88
PLN02260	668	probable rhamnose biosynthetic enzyme	99.88
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.87
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.87
PLN02240	352	UDP-glucose 4-epimerase	99.87
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.87
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.87
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.87
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.87
PLN02653	340	GDP-mannose 4,6-dehydratase	99.87
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.86
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.86
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.86
PRK05865	854	hypothetical protein; Provisional	99.86
PRK06182	273	short chain dehydrogenase; Validated	99.85
PLN02996	491	fatty acyl-CoA reductase	99.85
PRK06180	277	short chain dehydrogenase; Provisional	99.85
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.85
PRK06179	270	short chain dehydrogenase; Provisional	99.85
PRK05993	277	short chain dehydrogenase; Provisional	99.85
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.85
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.84
PRK06482	276	short chain dehydrogenase; Provisional	99.84
PRK07201	657	short chain dehydrogenase; Provisional	99.84
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.84
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.84
PRK06196	315	oxidoreductase; Provisional	99.84
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.84
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.84
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.83
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.83
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.83
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.83
PRK06523	260	short chain dehydrogenase; Provisional	99.83
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.83
PRK08263	275	short chain dehydrogenase; Provisional	99.83
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.83
PRK06914	280	short chain dehydrogenase; Provisional	99.82
PLN02253	280	xanthoxin dehydrogenase	99.82
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.82
PRK07024	257	short chain dehydrogenase; Provisional	99.82
PRK07825	273	short chain dehydrogenase; Provisional	99.82
PRK05717	255	oxidoreductase; Validated	99.82
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK09291	257	short chain dehydrogenase; Provisional	99.82
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.82
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.82
PRK07060	245	short chain dehydrogenase; Provisional	99.82
PRK06138	252	short chain dehydrogenase; Provisional	99.82
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.82
PRK07774	250	short chain dehydrogenase; Provisional	99.82
PRK07806	248	short chain dehydrogenase; Provisional	99.82
PRK06398	258	aldose dehydrogenase; Validated	99.81
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.81
PRK05875	276	short chain dehydrogenase; Provisional	99.81
PRK07067	257	sorbitol dehydrogenase; Provisional	99.81
PRK07890	258	short chain dehydrogenase; Provisional	99.81
PRK05866	293	short chain dehydrogenase; Provisional	99.81
PRK12827	249	short chain dehydrogenase; Provisional	99.81
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.81
PRK08265	261	short chain dehydrogenase; Provisional	99.81
PRK08264	238	short chain dehydrogenase; Validated	99.81
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.81
PRK12828	239	short chain dehydrogenase; Provisional	99.81
PRK06101	240	short chain dehydrogenase; Provisional	99.81
PRK08628	258	short chain dehydrogenase; Provisional	99.81
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.81
PRK05876	275	short chain dehydrogenase; Provisional	99.81
PRK07063	260	short chain dehydrogenase; Provisional	99.81
PRK08267	260	short chain dehydrogenase; Provisional	99.81
PRK06194	287	hypothetical protein; Provisional	99.8
PRK07856	252	short chain dehydrogenase; Provisional	99.8
PRK09135	249	pteridine reductase; Provisional	99.8
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.8
PRK12746	254	short chain dehydrogenase; Provisional	99.8
PRK05693	274	short chain dehydrogenase; Provisional	99.8
PRK12829	264	short chain dehydrogenase; Provisional	99.8
PRK07904	253	short chain dehydrogenase; Provisional	99.8
PRK07478	254	short chain dehydrogenase; Provisional	99.8
PRK10538	248	malonic semialdehyde reductase; Provisional	99.8
PRK06057	255	short chain dehydrogenase; Provisional	99.8
PRK07814	263	short chain dehydrogenase; Provisional	99.8
PRK12742	237	oxidoreductase; Provisional	99.8
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.8
PRK09186	256	flagellin modification protein A; Provisional	99.8
PRK07577	234	short chain dehydrogenase; Provisional	99.8
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.8
PRK06500	249	short chain dehydrogenase; Provisional	99.8
PRK08339	263	short chain dehydrogenase; Provisional	99.8
PRK06128	300	oxidoreductase; Provisional	99.8
PRK08643	256	acetoin reductase; Validated	99.79
PRK07326	237	short chain dehydrogenase; Provisional	99.79
PRK07023	243	short chain dehydrogenase; Provisional	99.79
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.79
PRK07102	243	short chain dehydrogenase; Provisional	99.79
PRK06197	306	short chain dehydrogenase; Provisional	99.79
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.79
PRK06949	258	short chain dehydrogenase; Provisional	99.79
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK07454	241	short chain dehydrogenase; Provisional	99.79
PRK07775	274	short chain dehydrogenase; Provisional	99.79
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.79
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.79
PRK08251	248	short chain dehydrogenase; Provisional	99.79
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.79
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.79
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.79
PRK08589	272	short chain dehydrogenase; Validated	99.79
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.79
PRK06114	254	short chain dehydrogenase; Provisional	99.79
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.79
PRK05884	223	short chain dehydrogenase; Provisional	99.79
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.78
PRK07035	252	short chain dehydrogenase; Provisional	99.78
PRK06483	236	dihydromonapterin reductase; Provisional	99.78
PRK12320	699	hypothetical protein; Provisional	99.78
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK09242	257	tropinone reductase; Provisional	99.78
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.78
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.78
PRK05872	296	short chain dehydrogenase; Provisional	99.78
PRK05867	253	short chain dehydrogenase; Provisional	99.78
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.78
PRK12743	256	oxidoreductase; Provisional	99.78
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.78
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.78
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.78
PRK07985	294	oxidoreductase; Provisional	99.78
PRK06841	255	short chain dehydrogenase; Provisional	99.78
PRK12939	250	short chain dehydrogenase; Provisional	99.78
PRK12747	252	short chain dehydrogenase; Provisional	99.78
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.78
PRK07074	257	short chain dehydrogenase; Provisional	99.78
PRK06139	330	short chain dehydrogenase; Provisional	99.78
PRK06181	263	short chain dehydrogenase; Provisional	99.78
PRK05854	313	short chain dehydrogenase; Provisional	99.78
PRK12367	245	short chain dehydrogenase; Provisional	99.77
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK07062	265	short chain dehydrogenase; Provisional	99.77
PRK08219	227	short chain dehydrogenase; Provisional	99.77
PRK07109	334	short chain dehydrogenase; Provisional	99.77
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK06701	290	short chain dehydrogenase; Provisional	99.77
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.77
PRK08017	256	oxidoreductase; Provisional	99.77
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.77
PRK05650	270	short chain dehydrogenase; Provisional	99.77
PRK06172	253	short chain dehydrogenase; Provisional	99.77
PRK08177	225	short chain dehydrogenase; Provisional	99.77
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK08278	273	short chain dehydrogenase; Provisional	99.76
PRK06123	248	short chain dehydrogenase; Provisional	99.76
PRK12937	245	short chain dehydrogenase; Provisional	99.76
PRK09072	263	short chain dehydrogenase; Provisional	99.76
PRK07576	264	short chain dehydrogenase; Provisional	99.76
PRK08226	263	short chain dehydrogenase; Provisional	99.76
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.76
PRK12744	257	short chain dehydrogenase; Provisional	99.75
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.75
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.75
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.75
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.75
PRK08703	239	short chain dehydrogenase; Provisional	99.75
PRK07677	252	short chain dehydrogenase; Provisional	99.75
PRK09134	258	short chain dehydrogenase; Provisional	99.74
PRK07831	262	short chain dehydrogenase; Provisional	99.74
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.74
PRK07832	272	short chain dehydrogenase; Provisional	99.74
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.74
PLN02503	605	fatty acyl-CoA reductase 2	99.74
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.74
PRK07201	657	short chain dehydrogenase; Provisional	99.74
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.74
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.74
PRK06484	520	short chain dehydrogenase; Validated	99.74
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.74
PLN02778	298	3,5-epimerase/4-reductase	99.73
PRK06125	259	short chain dehydrogenase; Provisional	99.73
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK05855	582	short chain dehydrogenase; Validated	99.73
PRK06953	222	short chain dehydrogenase; Provisional	99.73
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.73
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK07069	251	short chain dehydrogenase; Validated	99.73
PRK06940	275	short chain dehydrogenase; Provisional	99.73
COG2910	211	Putative NADH-flavin reductase [General function p	99.72
PRK06198	260	short chain dehydrogenase; Provisional	99.72
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PRK06924	251	short chain dehydrogenase; Provisional	99.72
PRK07041	230	short chain dehydrogenase; Provisional	99.72
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.72
PRK07791	286	short chain dehydrogenase; Provisional	99.72
PRK08862	227	short chain dehydrogenase; Provisional	99.72
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.72
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.71
PLN02780	320	ketoreductase/ oxidoreductase	99.71
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.71
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.71
PRK08303	305	short chain dehydrogenase; Provisional	99.71
PRK08324	681	short chain dehydrogenase; Validated	99.7
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.7
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.7
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.7
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
KOG0725	270	consensus Reductases with broad range of substrate	99.7
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.7
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.7
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK06484	520	short chain dehydrogenase; Validated	99.7
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.69
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.69
PRK07578	199	short chain dehydrogenase; Provisional	99.69
PRK05599	246	hypothetical protein; Provisional	99.69
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.69
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.69
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.68
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.68
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.66
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.66
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.66
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.65
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.65
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.65
PLN02260	668	probable rhamnose biosynthetic enzyme	99.64
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.61
PLN00015	308	protochlorophyllide reductase	99.61
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.6
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.6
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.58
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.58
COG1028	251	FabG Dehydrogenases with different specificities (	99.58
KOG1208	314	consensus Dehydrogenases with different specificit	99.57
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.57
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.54
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.51
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.5
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.48
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.47
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.47
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.44
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.4
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.4
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.38
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.35
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.34
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.18
PRK06720	169	hypothetical protein; Provisional	99.17
PRK08309	177	short chain dehydrogenase; Provisional	99.11
PTZ00325	321	malate dehydrogenase; Provisional	99.1
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.05
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.01
KOG2774	366	consensus NAD dependent epimerase [General functio	98.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.96
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.93
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.92
PLN00106	323	malate dehydrogenase	98.87
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.76
PRK09620	229	hypothetical protein; Provisional	98.73
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.64
PRK05086	312	malate dehydrogenase; Provisional	98.62
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.6
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.58
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.58
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.56
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.43
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.43
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.33
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.29
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.28
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.26
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.26
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.26
PRK14982	340	acyl-ACP reductase; Provisional	98.23
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.19
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.17
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.17
COG3268	382	Uncharacterized conserved protein [Function unknow	98.11
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	98.09
PLN00112	444	malate dehydrogenase (NADP); Provisional	98.07
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	98.06
PRK09496	453	trkA potassium transporter peripheral membrane com	98.06
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.91
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.91
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.89
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.88
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.81
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	97.81
PRK04148	134	hypothetical protein; Provisional	97.81
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.78
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.78
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.78
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.76
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.76
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.75
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.74
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.72
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.72
PRK09496	453	trkA potassium transporter peripheral membrane com	97.72
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.7
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.68
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.67
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.67
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.63
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.61
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.6
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.59
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.58
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.57
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.57
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.56
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.56
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.55
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.54
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.52
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.49
PRK05442	326	malate dehydrogenase; Provisional	97.48
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.47
PLN02383	344	aspartate semialdehyde dehydrogenase	97.45
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.44
PRK10669	558	putative cation:proton antiport protein; Provision	97.43
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.43
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.39
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.39
PTZ00117	319	malate dehydrogenase; Provisional	97.35
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.34
PRK08655	437	prephenate dehydrogenase; Provisional	97.33
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.29
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.28
PRK08223	287	hypothetical protein; Validated	97.28
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.28
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.27
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.27
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.26
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.26
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.26
PRK06719	157	precorrin-2 dehydrogenase; Validated	97.26
PLN02586	360	probable cinnamyl alcohol dehydrogenase	97.26
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.26
PRK06223	307	malate dehydrogenase; Reviewed	97.25
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.25
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.24
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.24
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.23
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	97.23
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.23
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.21
PRK08328	231	hypothetical protein; Provisional	97.2
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.2
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.2
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.2
PRK03562	621	glutathione-regulated potassium-efflux system prot	97.19
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.19
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.16
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.16
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.15
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.15
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.15
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	97.14
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.14
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.14
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.14
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.13
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	97.12
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.11
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.11
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.1
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.1
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.1
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	97.08
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.08
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	97.08
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.08
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	97.06
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.04
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	97.02
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.02
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.02
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.01
PLN02602	350	lactate dehydrogenase	97.01
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	97.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	96.99
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.99
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.99
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.99
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.99
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.99
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.99
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.97
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.95
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.94
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.94
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.94
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.94
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.94
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.93
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.93
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.92
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.9
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.89
PRK07877	722	hypothetical protein; Provisional	96.89
PRK10537	393	voltage-gated potassium channel; Provisional	96.89
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.87
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.85
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.84
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.83
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.81
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.81
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.78
PLN00203	519	glutamyl-tRNA reductase	96.78
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.78
COG4982	866	3-oxoacyl-[acyl-carrier protein]	96.77
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	96.76
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.76
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.75
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.75
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.74
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.74
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.73
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.73
PLN02928	347	oxidoreductase family protein	96.71
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.71
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.71
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.7
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.7
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.69
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.69
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.68
PRK14851	679	hypothetical protein; Provisional	96.66
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	96.64
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.64
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.63
PLN02712	667	arogenate dehydrogenase	96.63
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.62
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.62
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.61
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.6
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.6
PRK07574	385	formate dehydrogenase; Provisional	96.59
PRK02705	459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.59
PRK08818	370	prephenate dehydrogenase; Provisional	96.58
PRK07411	390	hypothetical protein; Validated	96.57
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	96.56
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.56
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.56
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.56
PRK14852	989	hypothetical protein; Provisional	96.55
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.55
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.55
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.55
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.53
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.52
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.52
PRK12480	330	D-lactate dehydrogenase; Provisional	96.52
PRK13243	333	glyoxylate reductase; Reviewed	96.51

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.95  E-value=2.3e-27  Score=210.67  Aligned_cols=149  Identities=51%  Similarity=0.869  Sum_probs=130.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC--CC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR--PE  161 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~--~~  161 (269)
                      |+|+|||||||||++++++|+++||+|++++|+.++. ..+...+++++.+|++|++++.++++++|+|||+++..  ..
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~-~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~   79 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA-SFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDL   79 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh-hhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCc
Confidence            4899999999999999999999999999999985433 22334579999999999999999999999999998743  23


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEEEEEcCcccccC
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g~~  233 (269)
                      ..+.++|+.++.+++++|+++|++|||++|+.+....+..+|..+|..+|+++++.+++++++||+.+|+++
T Consensus        80 ~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~~~~~~~~K~~~e~~l~~~~l~~tilRp~~~~~~~  151 (317)
T CHL00194         80 YNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYPYIPLMKLKSDIEQKLKKSGIPYTIFRLAGFFQGL  151 (317)
T ss_pred             cchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccCCChHHHHHHHHHHHHHHcCCCeEEEeecHHhhhh
Confidence            456778999999999999999999999999976655567889999999999999999999999999998764

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.95  E-value=5e-27  Score=204.76  Aligned_cols=151  Identities=28%  Similarity=0.443  Sum_probs=124.1

Q ss_pred             EEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCc-cccccCCCE-EEEcCCCCCCcHHHHhcCccEEEEcCCCC---
Q 024290           87 LVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPA-DFLRDWGAT-VVNADLSKPETIPATLVGVHTVIDCATGR---  159 (269)
Q Consensus        87 lVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~-~~~~~~~~~-~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~---  159 (269)
                      |||||+||||++|+++|+++|  ++|+++++.+.... ..+...+.. ++++|++|.+++.++++++|+|||+|+..   
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~   80 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW   80 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence            699999999999999999999  89999998754332 223333444 99999999999999999999999999832   


Q ss_pred             ---CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------------CCCCCcHHHHHHHHHHHHHhc
Q 024290          160 ---PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------------KHPEVPLMEIKYCTEQFLQDS  217 (269)
Q Consensus       160 ---~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------------~~~~~~y~~sK~~~e~~~~~~  217 (269)
                         +.+.++++|+.|+++++++|++.+++||||+||.++.                   ..+...|+.+|..+|+++.+.
T Consensus        81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a  160 (280)
T PF01073_consen   81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEA  160 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhh
Confidence               2445788999999999999999999999999997641                   113346999999999988542


Q ss_pred             ---------CCCEEEEEcCcccccCcccc
Q 024290          218 ---------GLPHVIIRLWPYWAICSTYT  237 (269)
Q Consensus       218 ---------gi~~~ilrp~~i~g~~~~~~  237 (269)
                               .+..++|||..|||+.+...
T Consensus       161 ~~~~~~~g~~l~t~~lRP~~IyGp~d~~~  189 (280)
T PF01073_consen  161 NGSELKNGGRLRTCALRPAGIYGPGDQRL  189 (280)
T ss_pred             cccccccccceeEEEEeccEEeCcccccc
Confidence                     27899999999999987543

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.94  E-value=4.6e-26  Score=193.60  Aligned_cols=151  Identities=23%  Similarity=0.320  Sum_probs=129.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCC---
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATG---  158 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~---  158 (269)
                      |+||||||+||||+|.+.+|++.|++|++++.-.....+.+....++++++|+.|.+.|.++|+  .+|+|||.|+.   
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V   80 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV   80 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence            5799999999999999999999999999999854433333333237899999999999999995  68999999992   


Q ss_pred             ----CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-------------CCCCCCcHHHHHHHHHHHHHh----c
Q 024290          159 ----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------------DKHPEVPLMEIKYCTEQFLQD----S  217 (269)
Q Consensus       159 ----~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-------------~~~~~~~y~~sK~~~e~~~~~----~  217 (269)
                          ..+..+++.|+.++.+|+++|++.|+++|||.||..+             +..|.+|||.+|.+.|++++.    .
T Consensus        81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~  160 (329)
T COG1087          81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKAN  160 (329)
T ss_pred             chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhC
Confidence                4566788999999999999999999999999999764             234678999999999999864    7


Q ss_pred             CCCEEEEEcCcccccCc
Q 024290          218 GLPHVIIRLWPYWAICS  234 (269)
Q Consensus       218 gi~~~ilrp~~i~g~~~  234 (269)
                      ++++++||..++-|...
T Consensus       161 ~~~~v~LRYFN~aGA~~  177 (329)
T COG1087         161 PFKVVILRYFNVAGACP  177 (329)
T ss_pred             CCcEEEEEecccccCCC
Confidence            89999999999988643

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.94  E-value=3.9e-26  Score=205.25  Aligned_cols=155  Identities=14%  Similarity=0.169  Sum_probs=127.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----------cCCCEEEEcCCCCCCcHHHHhcCc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----------DWGATVVNADLSKPETIPATLVGV  149 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----------~~~~~~i~~Dl~d~~~l~~~~~~~  149 (269)
                      -+++|+|+|||||||||++|+++|+++|++|++++|........+.          ...+.++.+|+.|.+.+.++++++
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~   91 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV   91 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence            3667899999999999999999999999999999986432211110          124778999999999999999999


Q ss_pred             cEEEEcCCCC-------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHH
Q 024290          150 HTVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYC  209 (269)
Q Consensus       150 d~vi~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~  209 (269)
                      |+|||+|+..       .+....++|+.++.+++++|++.++++|||+||..+.             ..|.++|+.+|..
T Consensus        92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~  171 (348)
T PRK15181         92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYV  171 (348)
T ss_pred             CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHH
Confidence            9999999831       2335678999999999999999999999999987431             1245689999999


Q ss_pred             HHHHHH----hcCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      .|.+++    +.+++++++||+++||+..
T Consensus       172 ~e~~~~~~~~~~~~~~~~lR~~~vyGp~~  200 (348)
T PRK15181        172 NELYADVFARSYEFNAIGLRYFNVFGRRQ  200 (348)
T ss_pred             HHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence            998764    4689999999999999864

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.93  E-value=1.6e-25  Score=207.02  Aligned_cols=156  Identities=11%  Similarity=0.098  Sum_probs=122.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC---CC----c---------ccc------ccCCCEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP---AP----A---------DFL------RDWGATVVNADLS  137 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~---~~----~---------~~~------~~~~~~~i~~Dl~  137 (269)
                      ..++|+||||||+||||++|+++|+++|++|++++|...   ..    .         +.+      ...+++++.+|++
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~  123 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC  123 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence            467789999999999999999999999999999875211   10    0         000      0125889999999


Q ss_pred             CCCcHHHHhc--CccEEEEcCCCCC----------CccchhhcHHHHHHHHHHHHHcCCC-eEEEecccCCC--------
Q 024290          138 KPETIPATLV--GVHTVIDCATGRP----------EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNCD--------  196 (269)
Q Consensus       138 d~~~l~~~~~--~~d~vi~~ag~~~----------~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~SS~~~~--------  196 (269)
                      |.+.+.++++  ++|+|||+|+...          ....+++|+.++.+++++|++.+++ +||++||..+.        
T Consensus       124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~~~  203 (442)
T PLN02572        124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDIE  203 (442)
T ss_pred             CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCCCc
Confidence            9999999987  5899999996311          1233578999999999999999986 89999987531        


Q ss_pred             ------------------CCCCCcHHHHHHHHHHHHH----hcCCCEEEEEcCcccccCcc
Q 024290          197 ------------------KHPEVPLMEIKYCTEQFLQ----DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       197 ------------------~~~~~~y~~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~~  235 (269)
                                        ..|.++|+.+|.+.|.+++    ..|++++++||+++||+...
T Consensus       204 E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~  264 (442)
T PLN02572        204 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTD  264 (442)
T ss_pred             ccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCc
Confidence                              1233579999999998774    46999999999999999743

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.93  E-value=2.2e-25  Score=198.52  Aligned_cols=154  Identities=18%  Similarity=0.229  Sum_probs=127.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCcc---ccccCCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPAD---FLRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      +++|+||||||+||||+++++.|+++|  ++|++++|+......   .+...+++++.+|++|.+.+.++++++|+|||+
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~   81 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA   81 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence            457899999999999999999999986  789999987543221   111235788999999999999999999999999


Q ss_pred             CCCCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHH-------hcCCCE
Q 024290          156 ATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQ-------DSGLPH  221 (269)
Q Consensus       156 ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~-------~~gi~~  221 (269)
                      ||...       +...+++|+.++.++++++++.++++||++||... ..|.++|+.+|.++|.+++       ..|+++
T Consensus        82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~-~~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~  160 (324)
T TIGR03589        82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA-ANPINLYGATKLASDKLFVAANNISGSKGTRF  160 (324)
T ss_pred             cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHHHHhhccccCcEE
Confidence            98421       23567899999999999999999999999999653 4567889999999998874       368999


Q ss_pred             EEEEcCcccccCcc
Q 024290          222 VIIRLWPYWAICST  235 (269)
Q Consensus       222 ~ilrp~~i~g~~~~  235 (269)
                      +++|||++||+...
T Consensus       161 ~~lR~g~v~G~~~~  174 (324)
T TIGR03589       161 SVVRYGNVVGSRGS  174 (324)
T ss_pred             EEEeecceeCCCCC
Confidence            99999999997543

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.93  E-value=6.1e-25  Score=200.11  Aligned_cols=155  Identities=13%  Similarity=0.189  Sum_probs=124.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccc------cCCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      +.+.|+|||||||||||++|++.|+++ |++|++++|+.++......      ..+++++.+|++|.+.+.++++++|+|
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~V   90 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLT   90 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEE
Confidence            456689999999999999999999998 5999999987543322111      135889999999999999999999999


Q ss_pred             EEcCCCCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC----------------------------
Q 024290          153 IDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK----------------------------  197 (269)
Q Consensus       153 i~~ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~----------------------------  197 (269)
                      ||+|+...       +...+..|+.++.+++++|++.+ ++|||+||..+..                            
T Consensus        91 iHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~  169 (386)
T PLN02427         91 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESP  169 (386)
T ss_pred             EEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccc
Confidence            99998321       12345689999999999999887 8999999864211                            


Q ss_pred             -------CCCCcHHHHHHHHHHHHHh----cCCCEEEEEcCcccccCcc
Q 024290          198 -------HPEVPLMEIKYCTEQFLQD----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       198 -------~~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~i~g~~~~  235 (269)
                             .+.++|+.+|.++|+++..    .+++++++||+++||+...
T Consensus       170 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~  218 (386)
T PLN02427        170 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD  218 (386)
T ss_pred             cccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCC
Confidence                   0124699999999998854    6899999999999999753

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.92  E-value=7.5e-25  Score=190.45  Aligned_cols=155  Identities=21%  Similarity=0.229  Sum_probs=127.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc--cccc-----CCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD--FLRD-----WGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~--~~~~-----~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      .+++|+||||+||||++|++.|+++||.|++..|++++...  .+.+     .....+.+|+.|++.+.++++|+|.|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            57899999999999999999999999999999999876322  1222     2488999999999999999999999999


Q ss_pred             cCCCCC------CccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCCCCCC--------------C----------CcH
Q 024290          155 CATGRP------EEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDKHP--------------E----------VPL  203 (269)
Q Consensus       155 ~ag~~~------~~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~~~~~--------------~----------~~y  203 (269)
                      +|....      ..+..+..+.|+.|++++|++.. |+|+||.||..+-..+              .          .-|
T Consensus        85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y  164 (327)
T KOG1502|consen   85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY  164 (327)
T ss_pred             eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence            998422      22677889999999999999988 9999999997541100              0          138


Q ss_pred             HHHHHHHHHH----HHhcCCCEEEEEcCcccccCccc
Q 024290          204 MEIKYCTEQF----LQDSGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       204 ~~sK~~~e~~----~~~~gi~~~ilrp~~i~g~~~~~  236 (269)
                      ..+|..+|+.    .++.+++.+.+.|+.++||....
T Consensus       165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~  201 (327)
T KOG1502|consen  165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQP  201 (327)
T ss_pred             HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCccc
Confidence            8899888864    46789999999999999996543

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.92  E-value=2.3e-24  Score=192.84  Aligned_cols=156  Identities=19%  Similarity=0.241  Sum_probs=126.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc-----cccc-CCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD-----FLRD-WGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~-----~~~~-~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      +++++|+|+||||+||||++|+++|+++|++|+++.|+.+....     .+.. .+++++.+|++|.+++.++++++|+|
T Consensus         5 ~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v   84 (338)
T PLN00198          5 TPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLV   84 (338)
T ss_pred             cCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEE
Confidence            45778899999999999999999999999999999987543211     1111 24788999999999999999999999


Q ss_pred             EEcCCCCC---C---ccchhhcHHHHHHHHHHHHHc-CCCeEEEecccCCCC--------------------------CC
Q 024290          153 IDCATGRP---E---EPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCDK--------------------------HP  199 (269)
Q Consensus       153 i~~ag~~~---~---~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~~~~--------------------------~~  199 (269)
                      ||+|+...   .   ..++++|+.++.++++++.+. ++++||++||..+..                          .|
T Consensus        85 ih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p  164 (338)
T PLN00198         85 FHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP  164 (338)
T ss_pred             EEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence            99998421   1   134578999999999999886 588999999964311                          13


Q ss_pred             CCcHHHHHHHHHHHHH----hcCCCEEEEEcCcccccCc
Q 024290          200 EVPLMEIKYCTEQFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       200 ~~~y~~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      .++|+.+|.+.|.+++    +.+++++++||+++||+..
T Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~  203 (338)
T PLN00198        165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSL  203 (338)
T ss_pred             cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCc
Confidence            4579999999998764    4699999999999999964

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.92  E-value=2.6e-24  Score=200.37  Aligned_cols=156  Identities=24%  Similarity=0.318  Sum_probs=128.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc--------------cCCCEEEEcCCCCCCcHHHH
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--------------DWGATVVNADLSKPETIPAT  145 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--------------~~~~~~i~~Dl~d~~~l~~~  145 (269)
                      .+.+++|+||||+|+||++++++|+++|++|++++|+.++......              ..+++++.+|+.|.+++.++
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            4667899999999999999999999999999999998665432211              12478899999999999999


Q ss_pred             hcCccEEEEcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCC--C------CCcHHHHHHHHHH
Q 024290          146 LVGVHTVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH--P------EVPLMEIKYCTEQ  212 (269)
Q Consensus       146 ~~~~d~vi~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~--~------~~~y~~sK~~~e~  212 (269)
                      ++++|+||||+|...     +...+++|+.++.++++++++.+++|||++||.++...  +      ...|...|..+|+
T Consensus       157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~  236 (576)
T PLN03209        157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEE  236 (576)
T ss_pred             hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHH
Confidence            999999999998532     23446789999999999999999999999999875311  1      1236678899999


Q ss_pred             HHHhcCCCEEEEEcCcccccCcc
Q 024290          213 FLQDSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       213 ~~~~~gi~~~ilrp~~i~g~~~~  235 (269)
                      ++++.|++|++||||+++++...
T Consensus       237 ~L~~sGIrvTIVRPG~L~tp~d~  259 (576)
T PLN03209        237 ALIASGLPYTIVRPGGMERPTDA  259 (576)
T ss_pred             HHHHcCCCEEEEECCeecCCccc
Confidence            99999999999999999877544

>PLN02214 cinnamoyl-CoA reductase

Probab=99.92  E-value=7.4e-25  Score=196.54  Aligned_cols=155  Identities=21%  Similarity=0.203  Sum_probs=126.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc----cccc--CCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~----~~~~--~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      .++|+|+||||+||||+++++.|+++|++|++++|+.+....    .+..  .+++++.+|++|.+++.++++++|+|||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            457899999999999999999999999999999997553211    1111  2477899999999999999999999999


Q ss_pred             cCCCC--CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC-CC---C-------------------CCCCcHHHHHHH
Q 024290          155 CATGR--PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN-CD---K-------------------HPEVPLMEIKYC  209 (269)
Q Consensus       155 ~ag~~--~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~-~~---~-------------------~~~~~y~~sK~~  209 (269)
                      +|+..  .+...+++|+.++.+++++|++.++++||++||.. ..   .                   .+.++|+.+|.+
T Consensus        88 ~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~  167 (342)
T PLN02214         88 TASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMV  167 (342)
T ss_pred             ecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHH
Confidence            99853  34566789999999999999999999999999853 21   0                   023469999999


Q ss_pred             HHHHHH----hcCCCEEEEEcCcccccCcc
Q 024290          210 TEQFLQ----DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       210 ~e~~~~----~~gi~~~ilrp~~i~g~~~~  235 (269)
                      .|+++.    +.+++++++||+++||+...
T Consensus       168 aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~  197 (342)
T PLN02214        168 AEQAAWETAKEKGVDLVVLNPVLVLGPPLQ  197 (342)
T ss_pred             HHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence            998874    46999999999999999643

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.92  E-value=9.4e-25  Score=193.73  Aligned_cols=152  Identities=18%  Similarity=0.213  Sum_probs=123.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---c--c--cCCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---L--R--DWGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~--~--~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      +|+||||||+||||++++++|+++|++|++++|+.......   .  .  ..+++++++|+.|++.+.++++++|+|||+
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   83 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT   83 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence            57899999999999999999999999999999975432111   1  0  135789999999999999999999999999


Q ss_pred             CCCC-----CC-ccchhhcHHHHHHHHHHHHHc-CCCeEEEecccCC--C-CC---------------C------CCcHH
Q 024290          156 ATGR-----PE-EPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNC--D-KH---------------P------EVPLM  204 (269)
Q Consensus       156 ag~~-----~~-~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~~--~-~~---------------~------~~~y~  204 (269)
                      |+..     .. +.++++|+.++.++++++++. ++++|||+||.++  . ..               +      ..+|+
T Consensus        84 A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  163 (322)
T PLN02662         84 ASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYV  163 (322)
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHH
Confidence            9842     12 256788999999999999987 8999999999641  1 10               1      14699


Q ss_pred             HHHHHHHHHHH----hcCCCEEEEEcCcccccCc
Q 024290          205 EIKYCTEQFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       205 ~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      .+|...|++++    +.+++++++||+++||+..
T Consensus       164 ~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~  197 (322)
T PLN02662        164 LSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLL  197 (322)
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCC
Confidence            99999998764    5799999999999999864

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.92  E-value=5.5e-24  Score=193.96  Aligned_cols=153  Identities=24%  Similarity=0.392  Sum_probs=128.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc------cc-ccCCCEEEEcCCCCCCcHHHHhc----Cc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD------FL-RDWGATVVNADLSKPETIPATLV----GV  149 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~------~~-~~~~~~~i~~Dl~d~~~l~~~~~----~~  149 (269)
                      ..+++|+||||||+||++++++|+++|++|++++|+..+...      .. ...+++++++|++|++++.++++    ++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            567899999999999999999999999999999997644221      11 12368999999999999999987    59


Q ss_pred             cEEEEcCCCCC--CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHh--cCCCEEEEE
Q 024290          150 HTVIDCATGRP--EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQD--SGLPHVIIR  225 (269)
Q Consensus       150 d~vi~~ag~~~--~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~--~gi~~~ilr  225 (269)
                      |+||||++...  ....+++|+.++.++++++++.|+++||++||.... .+...|..+|...|+.++.  .+++|+++|
T Consensus       138 D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~-~p~~~~~~sK~~~E~~l~~~~~gl~~tIlR  216 (390)
T PLN02657        138 DVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQ-KPLLEFQRAKLKFEAELQALDSDFTYSIVR  216 (390)
T ss_pred             cEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecccc-CcchHHHHHHHHHHHHHHhccCCCCEEEEc
Confidence            99999988432  245567899999999999999999999999998754 4566799999999999876  899999999


Q ss_pred             cCcccccCc
Q 024290          226 LWPYWAICS  234 (269)
Q Consensus       226 p~~i~g~~~  234 (269)
                      |+.+|++..
T Consensus       217 p~~~~~~~~  225 (390)
T PLN02657        217 PTAFFKSLG  225 (390)
T ss_pred             cHHHhcccH
Confidence            999998754

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.92  E-value=2.6e-24  Score=191.21  Aligned_cols=153  Identities=18%  Similarity=0.198  Sum_probs=124.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc---ccc----cCCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR----DWGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~---~~~----~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      .+|+|+||||+||||++++++|+++|++|+++.|+......   ...    ..+++++.+|++|++.+.++++++|+|||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   83 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH   83 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence            46899999999999999999999999999999997654221   111    13578899999999999999999999999


Q ss_pred             cCCCCC------CccchhhcHHHHHHHHHHHHHc-CCCeEEEecccCCC---C---------------------CCCCcH
Q 024290          155 CATGRP------EEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCD---K---------------------HPEVPL  203 (269)
Q Consensus       155 ~ag~~~------~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~~~---~---------------------~~~~~y  203 (269)
                      +|+...      ....+++|+.++.++++++++. +++|||++||.+..   .                     .+.++|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y  163 (322)
T PLN02986         84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWY  163 (322)
T ss_pred             eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccch
Confidence            998421      1235678999999999999986 78999999996421   0                     013569


Q ss_pred             HHHHHHHHHHHH----hcCCCEEEEEcCcccccCc
Q 024290          204 MEIKYCTEQFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       204 ~~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+|...|.++.    +.+++++++||+++||+..
T Consensus       164 ~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~  198 (322)
T PLN02986        164 PLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLL  198 (322)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCC
Confidence            999999997664    4799999999999999864

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.92  E-value=4.8e-24  Score=174.32  Aligned_cols=165  Identities=28%  Similarity=0.395  Sum_probs=135.4

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCCccch
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIK  165 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~  165 (269)
                      |+|+||||++|+.++++|+++|++|++++|++++..+   ..+++++++|+.|++.+.++++++|+||++++....    
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~----   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK----   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT----
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc----
Confidence            7999999999999999999999999999998775544   568999999999999999999999999999985444    


Q ss_pred             hhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCC-----------cHHHHHHHHHHHHHhcCCCEEEEEcCcccccCc
Q 024290          166 KVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEV-----------PLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       166 ~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~-----------~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g~~~  234 (269)
                        +.....++++++++.+++++|++|+.+.......           .|...|...|+++++.+++|+++||+++|++..
T Consensus        74 --~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~~  151 (183)
T PF13460_consen   74 --DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYGNPS  151 (183)
T ss_dssp             --HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTTS
T ss_pred             --cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCCC
Confidence              2778889999999999999999999887554433           588999999999999999999999999999964


Q ss_pred             ccccceeEeCCCccccccccCCCCcchhccchh
Q 024290          235 TYTRREVCLGNGCTNSNCIHGHSGYSATDIRSF  267 (269)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvrd~  267 (269)
                      .  .......      ........++..|+..+
T Consensus       152 ~--~~~~~~~------~~~~~~~~i~~~DvA~~  176 (183)
T PF13460_consen  152 R--SYRLIKE------GGPQGVNFISREDVAKA  176 (183)
T ss_dssp             S--SEEEESS------TSTTSHCEEEHHHHHHH
T ss_pred             c--ceeEEec------cCCCCcCcCCHHHHHHH
Confidence            3  2121111      12233466777777655

...

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.92  E-value=1.9e-24  Score=194.10  Aligned_cols=151  Identities=15%  Similarity=0.271  Sum_probs=122.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCC-CCCcHHHHhcCccEEEEcCCC--
Q 024290           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLS-KPETIPATLVGVHTVIDCATG--  158 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~-d~~~l~~~~~~~d~vi~~ag~--  158 (269)
                      ||+|+||||+||||++|+++|+++ |++|++++|+...........+++++.+|+. +.+.+.++++++|+|||+|+.  
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~   80 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIAT   80 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence            468999999999999999999987 6999999986543333333446889999997 667788888999999999973  


Q ss_pred             -----CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC----------C----------CCCCcHHHHHHHHHHH
Q 024290          159 -----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD----------K----------HPEVPLMEIKYCTEQF  213 (269)
Q Consensus       159 -----~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~----------~----------~~~~~y~~sK~~~e~~  213 (269)
                           ..+...+++|+.++.+++++|++.+ ++|||+||..+.          .          .|.++|+.+|.+.|++
T Consensus        81 ~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~  159 (347)
T PRK11908         81 PATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRV  159 (347)
T ss_pred             hHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHH
Confidence                 2234556789999999999999988 799999996421          1          1223699999999988


Q ss_pred             HH----hcCCCEEEEEcCcccccCc
Q 024290          214 LQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++    +.+++++++||+++||+..
T Consensus       160 ~~~~~~~~~~~~~ilR~~~v~Gp~~  184 (347)
T PRK11908        160 IWAYGMEEGLNFTLFRPFNWIGPGL  184 (347)
T ss_pred             HHHHHHHcCCCeEEEeeeeeeCCCc
Confidence            75    4789999999999999864

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.91  E-value=2.7e-24  Score=193.30  Aligned_cols=154  Identities=18%  Similarity=0.192  Sum_probs=124.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cc-cCCCEEEEcCCCCCCcHHHHhcC--ccEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR-DWGATVVNADLSKPETIPATLVG--VHTVID  154 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~-~~~~~~i~~Dl~d~~~l~~~~~~--~d~vi~  154 (269)
                      +++|+||||||+||||+++++.|+++|++|++++|+.......   +. ...++++.+|++|.+++.+++++  +|+|||
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih   81 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH   81 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence            4578999999999999999999999999999999976543221   11 12467899999999999998874  699999


Q ss_pred             cCCCC-------CCccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCCC--------------CCCCCcHHHHHHHHHH
Q 024290          155 CATGR-------PEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCD--------------KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       155 ~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~~--------------~~~~~~y~~sK~~~e~  212 (269)
                      +|+..       .+...+++|+.++.++++++++.+ +++||++||..+.              ..|.++|+.+|.+.|.
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~  161 (349)
T TIGR02622        82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAEL  161 (349)
T ss_pred             CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHH
Confidence            99831       234566799999999999998877 7899999985321              2345789999999998


Q ss_pred             HHHh-----------cCCCEEEEEcCcccccCc
Q 024290          213 FLQD-----------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~-----------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.           .+++++++||+++||+..
T Consensus       162 ~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~  194 (349)
T TIGR02622       162 VIASYRSSFFGVANFHGIKIASARAGNVIGGGD  194 (349)
T ss_pred             HHHHHHHHhhcccccCCCcEEEEccCcccCCCc
Confidence            8754           289999999999999863

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.91  E-value=1.3e-23  Score=190.30  Aligned_cols=153  Identities=19%  Similarity=0.171  Sum_probs=123.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC--
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR--  159 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~--  159 (269)
                      .+|+|+|||||||||+++++.|+++|++|++++|........ .....+++.+|++|.+.+..++.++|+|||+|+..  
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~   98 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGG   98 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEcccccCC
Confidence            568999999999999999999999999999999864321111 11235788999999988888888999999999732  


Q ss_pred             ------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------------CCCCCcHHHHHHHHHHHH
Q 024290          160 ------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------------KHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       160 ------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------------~~~~~~y~~sK~~~e~~~  214 (269)
                            ......+.|+.++.+++++|++.++++|||+||..+.                   ..|.++|+.+|.+.|+++
T Consensus        99 ~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~  178 (370)
T PLN02695         99 MGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELC  178 (370)
T ss_pred             ccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHH
Confidence                  2233456899999999999999999999999986321                   124457999999999876


Q ss_pred             H----hcCCCEEEEEcCcccccCcc
Q 024290          215 Q----DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       215 ~----~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +    ..+++++++||+++||+...
T Consensus       179 ~~~~~~~g~~~~ilR~~~vyGp~~~  203 (370)
T PLN02695        179 KHYTKDFGIECRIGRFHNIYGPFGT  203 (370)
T ss_pred             HHHHHHhCCCEEEEEECCccCCCCC
Confidence            4    37999999999999998654

>PLN02650 dihydroflavonol-4-reductase

Probab=99.91  E-value=1.1e-23  Score=189.48  Aligned_cols=153  Identities=22%  Similarity=0.248  Sum_probs=123.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---ccc----CCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD----WGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~----~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      ..|+||||||+||||++++++|+++|++|++++|+.+.....   ...    ..++++.+|++|.+.+.++++++|+|||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH   83 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH   83 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence            457899999999999999999999999999999975443211   111    1467899999999999999999999999


Q ss_pred             cCCCCC------CccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCCC-----CC-------------------CCCcH
Q 024290          155 CATGRP------EEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCD-----KH-------------------PEVPL  203 (269)
Q Consensus       155 ~ag~~~------~~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~~-----~~-------------------~~~~y  203 (269)
                      +|+...      ....+++|+.++.+++++|++.+ +++|||+||.++.     ..                   +.++|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  163 (351)
T PLN02650         84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMY  163 (351)
T ss_pred             eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchH
Confidence            998421      12567899999999999999877 7899999987421     00                   12379


Q ss_pred             HHHHHHHHHHHH----hcCCCEEEEEcCcccccCc
Q 024290          204 MEIKYCTEQFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       204 ~~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+|.+.|.+++    +++++++++||+++||+..
T Consensus       164 ~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~  198 (351)
T PLN02650        164 FVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFI  198 (351)
T ss_pred             HHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCC
Confidence            999999998764    4699999999999999964

>PLN02686 cinnamoyl-CoA reductase

Probab=99.91  E-value=7.2e-24  Score=191.88  Aligned_cols=155  Identities=20%  Similarity=0.193  Sum_probs=124.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc--cc--------cCCCEEEEcCCCCCCcHHHHhcCc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF--LR--------DWGATVVNADLSKPETIPATLVGV  149 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~--~~--------~~~~~~i~~Dl~d~~~l~~~~~~~  149 (269)
                      .+++|+||||||+||||+++++.|+++|++|+++.|+.+.....  +.        ..++.++.+|++|.+++.++++++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~  129 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC  129 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence            46789999999999999999999999999999988875432211  10        124788999999999999999999


Q ss_pred             cEEEEcCCCC-------CCccchhhcHHHHHHHHHHHHHc-CCCeEEEecccC--C-----C-C----------------
Q 024290          150 HTVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHN--C-----D-K----------------  197 (269)
Q Consensus       150 d~vi~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~--~-----~-~----------------  197 (269)
                      |.|||+++..       ....+.++|+.++.++++++++. +++||||+||..  .     . .                
T Consensus       130 d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~  209 (367)
T PLN02686        130 AGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFC  209 (367)
T ss_pred             cEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhc
Confidence            9999999832       12345678999999999999986 799999999952  1     0 0                


Q ss_pred             -CCCCcHHHHHHHHHHHHH----hcCCCEEEEEcCcccccCc
Q 024290          198 -HPEVPLMEIKYCTEQFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       198 -~~~~~y~~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                       .+..+|+.+|.+.|++++    +.|++++++||+++||+..
T Consensus       210 ~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~  251 (367)
T PLN02686        210 RDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGF  251 (367)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCC
Confidence             022469999999999874    4699999999999999964

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.91  E-value=1.1e-23  Score=203.94  Aligned_cols=153  Identities=18%  Similarity=0.242  Sum_probs=123.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCc-HHHHhcCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPET-IPATLVGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~-l~~~~~~~d~vi~~ag~  158 (269)
                      ..+|+||||||+||||++|+++|+++ ||+|++++|............+++++.+|++|.+. +.++++++|+|||+|+.
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~  392 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAI  392 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccc
Confidence            45689999999999999999999986 79999999976543333333468899999998765 57788899999999983


Q ss_pred             CC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC--------------------CCCCcHHHHHHHHH
Q 024290          159 RP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------------HPEVPLMEIKYCTE  211 (269)
Q Consensus       159 ~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~--------------------~~~~~y~~sK~~~e  211 (269)
                      ..       +...+++|+.++.+++++|++.+ ++|||+||..+..                    .+.++|+.+|.+.|
T Consensus       393 ~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E  471 (660)
T PRK08125        393 ATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLD  471 (660)
T ss_pred             cCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHH
Confidence            22       23456789999999999999988 7999999964210                    11236999999999


Q ss_pred             HHHH----hcCCCEEEEEcCcccccCc
Q 024290          212 QFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++++    ..+++++++||+++||+..
T Consensus       472 ~~~~~~~~~~g~~~~ilR~~~vyGp~~  498 (660)
T PRK08125        472 RVIWAYGEKEGLRFTLFRPFNWMGPRL  498 (660)
T ss_pred             HHHHHHHHhcCCceEEEEEceeeCCCc
Confidence            9884    4689999999999999864

>PLN02583 cinnamoyl-CoA reductase

Probab=99.91  E-value=2.7e-23  Score=182.98  Aligned_cols=154  Identities=21%  Similarity=0.222  Sum_probs=122.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC--ccccc-----cCCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--ADFLR-----DWGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~--~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      .+++|+||||+||||++++++|+++||+|++++|+.+..  .+.+.     ..+++++++|++|.+.+.+++.++|.|+|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            457899999999999999999999999999999963221  11111     12578899999999999999999999999


Q ss_pred             cCCCCC-----CccchhhcHHHHHHHHHHHHHc-CCCeEEEecccCCC--C---C----------CC---------CcHH
Q 024290          155 CATGRP-----EEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCD--K---H----------PE---------VPLM  204 (269)
Q Consensus       155 ~ag~~~-----~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~~~--~---~----------~~---------~~y~  204 (269)
                      .++...     ++.++++|+.++.++++++.+. ++++||++||..+.  .   .          +.         ..|+
T Consensus        85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  164 (297)
T PLN02583         85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA  164 (297)
T ss_pred             eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence            876321     2456789999999999999886 68999999996421  1   0          00         1599


Q ss_pred             HHHHHHHHHH----HhcCCCEEEEEcCcccccCcc
Q 024290          205 EIKYCTEQFL----QDSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       205 ~sK~~~e~~~----~~~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+|...|+++    +..++++++|||+++||+...
T Consensus       165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~  199 (297)
T PLN02583        165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLT  199 (297)
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCC
Confidence            9999999887    346999999999999998653

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.90  E-value=3.5e-23  Score=186.26  Aligned_cols=152  Identities=16%  Similarity=0.235  Sum_probs=118.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-eCCCCCC--c---cccccCCCEEEEcCCCCCCcHHHHhc--CccEEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAP--A---DFLRDWGATVVNADLSKPETIPATLV--GVHTVID  154 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~-~R~~~~~--~---~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~  154 (269)
                      ||+|||||||||||+++++.|+++|++++++ +|.....  .   .......++++.+|++|.+.+.++++  ++|+|||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            4689999999999999999999999876554 4432211  1   10111247788999999999999997  4899999


Q ss_pred             cCCCC-------CCccchhhcHHHHHHHHHHHHH---------cCCCeEEEecccCCC---------------CCCCCcH
Q 024290          155 CATGR-------PEEPIKKVDWEGKVALIQCAKA---------MGIQKYVFYSIHNCD---------------KHPEVPL  203 (269)
Q Consensus       155 ~ag~~-------~~~~~~~~n~~~~~~li~a~~~---------~~v~r~V~~SS~~~~---------------~~~~~~y  203 (269)
                      +||..       .+..+.++|+.++.+++++|++         .++++||++||..+.               ..+.++|
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y  160 (355)
T PRK10217         81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY  160 (355)
T ss_pred             CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence            99842       2345778999999999999976         356799999985421               1245679


Q ss_pred             HHHHHHHHHHHH----hcCCCEEEEEcCcccccCc
Q 024290          204 MEIKYCTEQFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       204 ~~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+|.++|.+++    +.+++++++||+++||+..
T Consensus       161 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~  195 (355)
T PRK10217        161 SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH  195 (355)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence            999999998774    4799999999999999975

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.90  E-value=6.9e-23  Score=182.22  Aligned_cols=154  Identities=16%  Similarity=0.169  Sum_probs=123.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cc----cCCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~----~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      .+|+||||||+||||+++++.|+++|++|++++|+.......   ..    ..+++++.+|++|.+.+.++++++|+|||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            368999999999999999999999999999998876543221   11    12478899999999999999999999999


Q ss_pred             cCCCC-------CCccchhhcHHHHHHHHHHHHHc-CCCeEEEecccCCCCC------------------------CCCc
Q 024290          155 CATGR-------PEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCDKH------------------------PEVP  202 (269)
Q Consensus       155 ~ag~~-------~~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~~~~~------------------------~~~~  202 (269)
                      ||+..       .+...+++|+.++.++++++.+. ++++||++||..+...                        +.++
T Consensus        84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~  163 (325)
T PLN02989         84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW  163 (325)
T ss_pred             eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence            99842       12345678999999999999885 5789999999643100                        1246


Q ss_pred             HHHHHHHHHHHHH----hcCCCEEEEEcCcccccCcc
Q 024290          203 LMEIKYCTEQFLQ----DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       203 y~~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~~  235 (269)
                      |+.+|.+.|++++    +.+++++++||+++||+...
T Consensus       164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~  200 (325)
T PLN02989        164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQ  200 (325)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCC
Confidence            9999999998874    46999999999999998653

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.90  E-value=9e-23  Score=183.69  Aligned_cols=154  Identities=19%  Similarity=0.205  Sum_probs=121.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      -.+|+||||||+||||++++++|+++|++|++++|+.+.......    ..+++++.+|++|.+.+.++++++|+|||+|
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   87 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA   87 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence            346789999999999999999999999999999997543322211    1357889999999999999999999999999


Q ss_pred             CCCC---------Ccc-----chhhcHHHHHHHHHHHHHcC-CCeEEEecccCCCC-----------------C------
Q 024290          157 TGRP---------EEP-----IKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK-----------------H------  198 (269)
Q Consensus       157 g~~~---------~~~-----~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~~~-----------------~------  198 (269)
                      +...         .+.     .++.|+.++.+++++|++.+ +++||++||..+..                 .      
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~  167 (353)
T PLN02896         88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW  167 (353)
T ss_pred             ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence            8421         111     22344689999999998875 78999999864311                 0      


Q ss_pred             ----CCCcHHHHHHHHHHHHH----hcCCCEEEEEcCcccccCc
Q 024290          199 ----PEVPLMEIKYCTEQFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       199 ----~~~~y~~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                          +..+|+.+|.+.|++++    ..+++++++||+++||+..
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~  211 (353)
T PLN02896        168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFL  211 (353)
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCc
Confidence                11379999999998764    4799999999999999964

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.89  E-value=5e-23  Score=181.44  Aligned_cols=137  Identities=23%  Similarity=0.255  Sum_probs=114.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCCC-
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP-  160 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~~-  160 (269)
                      |+||||||+||||+++++.|+++| +|++++|...            .+.+|++|.+.+.++++  ++|+|||||+... 
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~   67 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAV   67 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCc
Confidence            479999999999999999999999 7998888531            24689999999999887  5899999998432 


Q ss_pred             ------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-------------CCCCCCcHHHHHHHHHHHHHhcCCCE
Q 024290          161 ------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------------DKHPEVPLMEIKYCTEQFLQDSGLPH  221 (269)
Q Consensus       161 ------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-------------~~~~~~~y~~sK~~~e~~~~~~gi~~  221 (269)
                            ++..+.+|+.++.+|+++|++.|+ +|||+||..+             +..|.++|+.+|.+.|++++....++
T Consensus        68 ~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~~  146 (299)
T PRK09987         68 DKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHCAKH  146 (299)
T ss_pred             chhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCE
Confidence                  223456899999999999999986 8999998532             12345679999999999999888899


Q ss_pred             EEEEcCcccccCc
Q 024290          222 VIIRLWPYWAICS  234 (269)
Q Consensus       222 ~ilrp~~i~g~~~  234 (269)
                      +++|++++||+..
T Consensus       147 ~ilR~~~vyGp~~  159 (299)
T PRK09987        147 LIFRTSWVYAGKG  159 (299)
T ss_pred             EEEecceecCCCC
Confidence            9999999999853

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.89  E-value=6.1e-24  Score=179.88  Aligned_cols=148  Identities=27%  Similarity=0.376  Sum_probs=124.6

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCc--cEEEEcCCCC----
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGV--HTVIDCATGR----  159 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~--d~vi~~ag~~----  159 (269)
                      |||||||||||++++++|+++|++|+.+.|+...........+++++.+|+.|.+.+.+++++.  |+|||+|+..    
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE   80 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence            7999999999999999999999999999997654432222237899999999999999999754  9999999964    


Q ss_pred             ---CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHHHHHHHHh----cCC
Q 024290          160 ---PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQD----SGL  219 (269)
Q Consensus       160 ---~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~~e~~~~~----~gi  219 (269)
                         .....++.|+.++.++++++++.++++||++||....             ..+.++|+.+|...|++++.    .++
T Consensus        81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~  160 (236)
T PF01370_consen   81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKYGL  160 (236)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence               3456677899999999999999999999999997431             12346799999999988754    589


Q ss_pred             CEEEEEcCcccccC
Q 024290          220 PHVIIRLWPYWAIC  233 (269)
Q Consensus       220 ~~~ilrp~~i~g~~  233 (269)
                      +++++||+.+||+.
T Consensus       161 ~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  161 RVTILRPPNVYGPG  174 (236)
T ss_dssp             EEEEEEESEEESTT
T ss_pred             cccccccccccccc
Confidence            99999999999998

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.89  E-value=1.9e-22  Score=177.82  Aligned_cols=150  Identities=31%  Similarity=0.451  Sum_probs=123.9

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCc-cEEEEcCCCCC---
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGV-HTVIDCATGRP---  160 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~-d~vi~~ag~~~---  160 (269)
                      +||||||+||||++|+++|+++|++|++++|.........  .++.++.+|++|.+.+.+++++. |+|||+|+...   
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~   79 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPD   79 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--cccceeeecccchHHHHHHHhcCCCEEEEccccCchhh
Confidence            4999999999999999999999999999999765544322  56789999999998888888888 99999998421   


Q ss_pred             -----CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC---------------CCCCcHHHHHHHHHHHHHh----
Q 024290          161 -----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK---------------HPEVPLMEIKYCTEQFLQD----  216 (269)
Q Consensus       161 -----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~---------------~~~~~y~~sK~~~e~~~~~----  216 (269)
                           +..++++|+.++.+++++|++.++++|||.||.+...               .|.++|+.+|.+.|++++.    
T Consensus        80 ~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~  159 (314)
T COG0451          80 SNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARL  159 (314)
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                 1237789999999999999999999999987754211               1223599999999998865    


Q ss_pred             cCCCEEEEEcCcccccCccc
Q 024290          217 SGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       217 ~gi~~~ilrp~~i~g~~~~~  236 (269)
                      .+++++++||+++||+....
T Consensus       160 ~~~~~~ilR~~~vyGp~~~~  179 (314)
T COG0451         160 YGLPVVILRPFNVYGPGDKP  179 (314)
T ss_pred             hCCCeEEEeeeeeeCCCCCC
Confidence            46999999999999987554

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.89  E-value=3.6e-22  Score=171.60  Aligned_cols=153  Identities=24%  Similarity=0.318  Sum_probs=121.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-cCCCEEEEcCCCCC-CcHHHHh-cCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKP-ETIPATL-VGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~~~~~i~~Dl~d~-~~l~~~~-~~~d~vi~~ag  157 (269)
                      ..+|+|+||||+|+||++++++|+++|++|+++.|+.++....+. ..+++++++|++|. +.+.+.+ .++|+||+++|
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g   94 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATG   94 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCC
Confidence            456899999999999999999999999999999998655433222 23688999999984 6677777 68999999998


Q ss_pred             CCC---CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC----CC-CCc---------HHHHHHHHHHHHHhcCCC
Q 024290          158 GRP---EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK----HP-EVP---------LMEIKYCTEQFLQDSGLP  220 (269)
Q Consensus       158 ~~~---~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~----~~-~~~---------y~~sK~~~e~~~~~~gi~  220 (269)
                      ...   .....++|..++.++++++++.++++||++||.++..    .+ ...         |...|...|+++++.+++
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~  174 (251)
T PLN00141         95 FRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGIN  174 (251)
T ss_pred             CCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            532   2233467889999999999999999999999986421    11 111         234688889999999999


Q ss_pred             EEEEEcCcccccC
Q 024290          221 HVIIRLWPYWAIC  233 (269)
Q Consensus       221 ~~ilrp~~i~g~~  233 (269)
                      +++|||+++++..
T Consensus       175 ~~iirpg~~~~~~  187 (251)
T PLN00141        175 YTIVRPGGLTNDP  187 (251)
T ss_pred             EEEEECCCccCCC
Confidence            9999999999864

>PLN00016 RNA-binding protein; Provisional

Probab=99.89  E-value=1.1e-22  Score=184.90  Aligned_cols=141  Identities=20%  Similarity=0.285  Sum_probs=112.5

Q ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc----------ccccCCCEEEEcCCCCCCcHHHHh
Q 024290           81 VRPTSILVV----GATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----------FLRDWGATVVNADLSKPETIPATL  146 (269)
Q Consensus        81 ~~~~~vlVt----GatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~----------~~~~~~~~~i~~Dl~d~~~l~~~~  146 (269)
                      .++++||||    |||||||++|++.|+++||+|++++|+......          .+...+++++++|+.|   +.+++
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhh
Confidence            445789999    999999999999999999999999998653211          1123468999999987   44444


Q ss_pred             --cCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCC----------CCcHHHHHHHHHHHH
Q 024290          147 --VGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP----------EVPLMEIKYCTEQFL  214 (269)
Q Consensus       147 --~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~----------~~~y~~sK~~~e~~~  214 (269)
                        .++|+|||+++.         +..++.+++++|++.|+++|||+||.++....          ..++. +|..+|.++
T Consensus       127 ~~~~~d~Vi~~~~~---------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l  196 (378)
T PLN00016        127 AGAGFDVVYDNNGK---------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVEAYL  196 (378)
T ss_pred             ccCCccEEEeCCCC---------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHHHHH
Confidence              478999999762         35678899999999999999999998653211          12233 799999999


Q ss_pred             HhcCCCEEEEEcCcccccCc
Q 024290          215 QDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       215 ~~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+++++++||+++||+..
T Consensus       197 ~~~~l~~~ilRp~~vyG~~~  216 (378)
T PLN00016        197 QKLGVNWTSFRPQYIYGPGN  216 (378)
T ss_pred             HHcCCCeEEEeceeEECCCC
Confidence            99999999999999999864

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.89  E-value=3e-22  Score=177.29  Aligned_cols=156  Identities=21%  Similarity=0.342  Sum_probs=128.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCC--Ccccc---ccCCCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPA--PADFL---RDWGATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~--~~~~~---~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      +++.+++||||+||+|++|+++|++++  .+|++++..+..  .....   ....++++++|+.|..++.++++++ .|+
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv   80 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV   80 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence            356789999999999999999999998  899999987542  11111   1346889999999999999999999 788


Q ss_pred             EcCCC-------CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC----------------CCCCCCcHHHHHHHH
Q 024290          154 DCATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC----------------DKHPEVPLMEIKYCT  210 (269)
Q Consensus       154 ~~ag~-------~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~----------------~~~~~~~y~~sK~~~  210 (269)
                      |||+.       ...+..+++|+.||.+++++|++.|++++||+||..+                +.....+|+.+|..+
T Consensus        81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~a  160 (361)
T KOG1430|consen   81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALA  160 (361)
T ss_pred             EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHH
Confidence            87762       2356778899999999999999999999999999764                111224799999999


Q ss_pred             HHHHHhcC----CCEEEEEcCcccccCcccc
Q 024290          211 EQFLQDSG----LPHVIIRLWPYWAICSTYT  237 (269)
Q Consensus       211 e~~~~~~g----i~~~ilrp~~i~g~~~~~~  237 (269)
                      |+++++.+    +..++|||..|||+++...
T Consensus       161 E~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~  191 (361)
T KOG1430|consen  161 EKLVLEANGSDDLYTCALRPPGIYGPGDKRL  191 (361)
T ss_pred             HHHHHHhcCCCCeeEEEEccccccCCCCccc
Confidence            99997644    7899999999999987653

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.88  E-value=4.7e-22  Score=176.43  Aligned_cols=151  Identities=26%  Similarity=0.378  Sum_probs=126.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC----
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR----  159 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~----  159 (269)
                      |+|+||||+|+||+++++.|+++|++|++++|+++.... +...+++++.+|+.|.+++.++++++|+|||+++..    
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~   79 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN-LEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWA   79 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc-cccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCC
Confidence            479999999999999999999999999999997654322 333478899999999999999999999999999742    


Q ss_pred             -CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCC-----------------CCCcHHHHHHHHHHHHHh----c
Q 024290          160 -PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH-----------------PEVPLMEIKYCTEQFLQD----S  217 (269)
Q Consensus       160 -~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~-----------------~~~~y~~sK~~~e~~~~~----~  217 (269)
                       .++..+++|+.++.++++++++.++++||++||..+...                 ...+|+.+|.+.|+++++    .
T Consensus        80 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  159 (328)
T TIGR03466        80 PDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEK  159 (328)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhc
Confidence             234567789999999999999999999999998643210                 024699999999988764    5


Q ss_pred             CCCEEEEEcCcccccCcc
Q 024290          218 GLPHVIIRLWPYWAICST  235 (269)
Q Consensus       218 gi~~~ilrp~~i~g~~~~  235 (269)
                      +++++++||+.+||+...
T Consensus       160 ~~~~~ilR~~~~~G~~~~  177 (328)
T TIGR03466       160 GLPVVIVNPSTPIGPRDI  177 (328)
T ss_pred             CCCEEEEeCCccCCCCCC
Confidence            899999999999998643

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.88  E-value=2.4e-22  Score=185.32  Aligned_cols=148  Identities=18%  Similarity=0.240  Sum_probs=115.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc----cccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~----~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      -..|+|+||||+||||++|++.|+++|++|++++|......    ......+++++.+|+.+.     .+.++|+|||+|
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlA  192 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLA  192 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECc
Confidence            45579999999999999999999999999999998532211    111223577888888664     245799999999


Q ss_pred             CCC-------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC------------------CCCCcHHHHHHHHH
Q 024290          157 TGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK------------------HPEVPLMEIKYCTE  211 (269)
Q Consensus       157 g~~-------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~------------------~~~~~y~~sK~~~e  211 (269)
                      +..       +....+++|+.++.+++++|++.++ +|||+||..+..                  .+.++|+.+|.+.|
T Consensus       193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE  271 (436)
T PLN02166        193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAE  271 (436)
T ss_pred             eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHH
Confidence            832       2334567999999999999999886 899999864211                  12356999999999


Q ss_pred             HHHHh----cCCCEEEEEcCcccccCc
Q 024290          212 QFLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      ++++.    .+++++++||+++||+..
T Consensus       272 ~~~~~y~~~~~l~~~ilR~~~vYGp~~  298 (436)
T PLN02166        272 TLAMDYHRGAGVEVRIARIFNTYGPRM  298 (436)
T ss_pred             HHHHHHHHHhCCCeEEEEEccccCCCC
Confidence            88753    689999999999999864

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.88  E-value=3.5e-22  Score=184.56  Aligned_cols=148  Identities=17%  Similarity=0.233  Sum_probs=116.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc----cccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~----~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      -++|+|||||||||||++|+++|+++|++|++++|......    ..+...+++++.+|+.++     ++.++|+|||+|
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlA  191 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLA  191 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEee
Confidence            45689999999999999999999999999999987532211    112234678888898664     345799999999


Q ss_pred             CCC-------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC---------------CC---CCcHHHHHHHHH
Q 024290          157 TGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK---------------HP---EVPLMEIKYCTE  211 (269)
Q Consensus       157 g~~-------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~---------------~~---~~~y~~sK~~~e  211 (269)
                      +..       ++...+++|+.++.+|+++|++.++ +|||+||..+..               .|   .++|+.+|.+.|
T Consensus       192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE  270 (442)
T PLN02206        192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAE  270 (442)
T ss_pred             eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHH
Confidence            832       2345667999999999999999986 899999975311               12   356999999999


Q ss_pred             HHHH----hcCCCEEEEEcCcccccCc
Q 024290          212 QFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++++    ..+++++++||+++||+..
T Consensus       271 ~~~~~y~~~~g~~~~ilR~~~vyGp~~  297 (442)
T PLN02206        271 TLTMDYHRGANVEVRIARIFNTYGPRM  297 (442)
T ss_pred             HHHHHHHHHhCCCeEEEEeccccCCCC
Confidence            8774    3689999999999999863

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.88  E-value=5.5e-22  Score=168.17  Aligned_cols=151  Identities=21%  Similarity=0.261  Sum_probs=126.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCC-----CCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRP-----RPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVID  154 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~-----~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~  154 (269)
                      |++|||||+||||+++++.++++.  ++|+.++.=     .+.+.......+..++++|+.|.+.+.++++  .+|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            579999999999999999999986  457777652     2233333445589999999999999999997  5899999


Q ss_pred             cCCC-------CCCccchhhcHHHHHHHHHHHHHcCCC-eEEEecccCC---------------CCCCCCcHHHHHHHHH
Q 024290          155 CATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNC---------------DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       155 ~ag~-------~~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~SS~~~---------------~~~~~~~y~~sK~~~e  211 (269)
                      .|+.       ..+..+.++|+.||.+|++++++...+ ||+++|+-.+               +..|.+||.+||++.+
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD  160 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD  160 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence            9983       457788999999999999999998765 9999998542               3457789999999998


Q ss_pred             HHHH----hcCCCEEEEEcCcccccCc
Q 024290          212 QFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++    .+|++++|.|+++-|||..
T Consensus       161 ~lVray~~TYglp~~ItrcSNNYGPyq  187 (340)
T COG1088         161 LLVRAYVRTYGLPATITRCSNNYGPYQ  187 (340)
T ss_pred             HHHHHHHHHcCCceEEecCCCCcCCCc
Confidence            7765    5899999999999999964

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.88  E-value=6e-22  Score=192.28  Aligned_cols=154  Identities=19%  Similarity=0.302  Sum_probs=122.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCCC--CCcccc---ccCCCEEEEcCCCCCCcHHHHh--cCccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRP--APADFL---RDWGATVVNADLSKPETIPATL--VGVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~--G~~V~~~~R~~~--~~~~~~---~~~~~~~i~~Dl~d~~~l~~~~--~~~d~  151 (269)
                      .++|+|||||||||||++|++.|+++  |++|++++|...  ......   ...+++++.+|++|.+.+..++  .++|+
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~   83 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT   83 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence            45689999999999999999999998  689999987421  111111   1236889999999988887766  57999


Q ss_pred             EEEcCCCCC-------CccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCCC----------------CCCCCcHHHHH
Q 024290          152 VIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCD----------------KHPEVPLMEIK  207 (269)
Q Consensus       152 vi~~ag~~~-------~~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~~----------------~~~~~~y~~sK  207 (269)
                      |||+|+...       ...+.++|+.++.++++++++.+ +++|||+||..+.                ..|.++|+.+|
T Consensus        84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK  163 (668)
T PLN02260         84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATK  163 (668)
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHH
Confidence            999999532       23456799999999999999987 8999999996421                12456799999


Q ss_pred             HHHHHHHHh----cCCCEEEEEcCcccccCc
Q 024290          208 YCTEQFLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       208 ~~~e~~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.|++++.    .+++++++||+++||+..
T Consensus       164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~  194 (668)
T PLN02260        164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ  194 (668)
T ss_pred             HHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence            999998753    689999999999999864

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.87  E-value=5.8e-22  Score=164.87  Aligned_cols=152  Identities=12%  Similarity=0.093  Sum_probs=124.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCC---CEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG---ATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~---~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      +.+|.++||||+++||.++++.|.++|++|++..|+.++++++..+.+   +..+..|++|.+++++++       .++|
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            556899999999999999999999999999999999887766554444   788999999998866655       4699


Q ss_pred             EEEEcCCC-----------CCCccchhhcHHHHHHHHH----HHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATG-----------RPEEPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~-----------~~~~~~~~~n~~~~~~li~----a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      ++|||||.           .+|+.++++|+.|..+..+    .+.+.+.++||++||++.  .......|+.+|+++..+
T Consensus        84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~f  163 (246)
T COG4221          84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAF  163 (246)
T ss_pred             EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHH
Confidence            99999993           2366788999998776555    456667779999999875  344567799999999877


Q ss_pred             HH-------hcCCCEEEEEcCccccc
Q 024290          214 LQ-------DSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       214 ~~-------~~gi~~~ilrp~~i~g~  232 (269)
                      .+       ..+++++.+.||.+-+.
T Consensus       164 s~~LR~e~~g~~IRVt~I~PG~v~~~  189 (246)
T COG4221         164 SLGLRQELAGTGIRVTVISPGLVETT  189 (246)
T ss_pred             HHHHHHHhcCCCeeEEEecCceecce
Confidence            52       27899999999999554

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.87  E-value=1.4e-21  Score=175.17  Aligned_cols=150  Identities=19%  Similarity=0.226  Sum_probs=119.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-----ccccc------cCCCEEEEcCCCCCCcHHHHhcC--cc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-----ADFLR------DWGATVVNADLSKPETIPATLVG--VH  150 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-----~~~~~------~~~~~~i~~Dl~d~~~l~~~~~~--~d  150 (269)
                      |+||||||+||||++|+++|+++|++|++++|+.+..     .....      ..+++++.+|++|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999975421     11110      13578999999999999999974  69


Q ss_pred             EEEEcCCCCC-------CccchhhcHHHHHHHHHHHHHcCCC---eEEEecccCC-------------CCCCCCcHHHHH
Q 024290          151 TVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQ---KYVFYSIHNC-------------DKHPEVPLMEIK  207 (269)
Q Consensus       151 ~vi~~ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~---r~V~~SS~~~-------------~~~~~~~y~~sK  207 (269)
                      +|||+|+...       .....++|+.++.+++++|++.+++   +|||+||..+             +..|.++|+.+|
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  160 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK  160 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence            9999998421       2234467889999999999998864   8999998632             113557899999


Q ss_pred             HHHHHHHHh----cCCCEEEEEcCcccccC
Q 024290          208 YCTEQFLQD----SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       208 ~~~e~~~~~----~gi~~~ilrp~~i~g~~  233 (269)
                      .+.|.+++.    .++++++.|+.++||+.
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~  190 (343)
T TIGR01472       161 LYAHWITVNYREAYGLFAVNGILFNHESPR  190 (343)
T ss_pred             HHHHHHHHHHHHHhCCceEEEeecccCCCC
Confidence            999988743    68999999999999875

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02240 UDP-glucose 4-epimerase

Probab=99.87  E-value=2.8e-21  Score=173.61  Aligned_cols=154  Identities=19%  Similarity=0.231  Sum_probs=123.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc-------ccc--ccCCCEEEEcCCCCCCcHHHHhc--C
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-------DFL--RDWGATVVNADLSKPETIPATLV--G  148 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~-------~~~--~~~~~~~i~~Dl~d~~~l~~~~~--~  148 (269)
                      .|++|+|+||||+||||++|++.|+++|++|++++|......       ...  ...+++++.+|++|++++.++++  +
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~   81 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR   81 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence            467789999999999999999999999999999987532211       000  11357889999999999998885  6


Q ss_pred             ccEEEEcCCCCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHH
Q 024290          149 VHTVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKY  208 (269)
Q Consensus       149 ~d~vi~~ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~  208 (269)
                      +|+|||+|+...       +...+++|+.++.+++++|++.++++||++||..+.             ..+..+|+.+|.
T Consensus        82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~  161 (352)
T PLN02240         82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKL  161 (352)
T ss_pred             CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHH
Confidence            899999998421       234577899999999999999999999999986431             123467999999


Q ss_pred             HHHHHHHh-----cCCCEEEEEcCcccccC
Q 024290          209 CTEQFLQD-----SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       209 ~~e~~~~~-----~gi~~~ilrp~~i~g~~  233 (269)
                      ++|++++.     .+++++++|++++||+.
T Consensus       162 ~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~  191 (352)
T PLN02240        162 FIEEICRDIHASDPEWKIILLRYFNPVGAH  191 (352)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEeecCcCCCC
Confidence            99998853     46889999999999864

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.87  E-value=1.4e-21  Score=175.70  Aligned_cols=151  Identities=17%  Similarity=0.253  Sum_probs=117.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCCC-CCcccc----ccCCCEEEEcCCCCCCcHHHHhc--CccEEEEc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRP-APADFL----RDWGATVVNADLSKPETIPATLV--GVHTVIDC  155 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~-V~~~~R~~~-~~~~~~----~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~  155 (269)
                      |+||||||+||||++|+++|+++|++ |+++++... ...+.+    ....++++.+|++|.+++.++++  ++|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            47999999999999999999999976 555554321 111111    12246788999999999999986  48999999


Q ss_pred             CCCC-------CCccchhhcHHHHHHHHHHHHHc---------CCCeEEEecccCCCC----------------------
Q 024290          156 ATGR-------PEEPIKKVDWEGKVALIQCAKAM---------GIQKYVFYSIHNCDK----------------------  197 (269)
Q Consensus       156 ag~~-------~~~~~~~~n~~~~~~li~a~~~~---------~v~r~V~~SS~~~~~----------------------  197 (269)
                      |+..       ..+.+.++|+.++.+++++|++.         ++++||++||..+..                      
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~  160 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA  160 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence            9842       24567889999999999999874         467999999863211                      


Q ss_pred             -CCCCcHHHHHHHHHHHHH----hcCCCEEEEEcCcccccCc
Q 024290          198 -HPEVPLMEIKYCTEQFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       198 -~~~~~y~~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                       .|.++|+.+|.++|.+++    ..+++++++|++.+||+..
T Consensus       161 ~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~  202 (352)
T PRK10084        161 YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYH  202 (352)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCc
Confidence             234679999999998774    3689999999999999874

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.87  E-value=7.7e-22  Score=172.28  Aligned_cols=133  Identities=26%  Similarity=0.300  Sum_probs=114.0

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCc--cEEEEcCCCCC--
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGV--HTVIDCATGRP--  160 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~--d~vi~~ag~~~--  160 (269)
                      +|+||||+||||+++++.|+++|++|++++|.                .+|+.|.+++.+++++.  |+|||+++...  
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~   64 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVD   64 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------ccCCCCHHHHHHHHHhCCCCEEEECCcccccc
Confidence            58999999999999999999999999999885                47999999999999765  99999998422  


Q ss_pred             -----CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          161 -----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       161 -----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                           ....+++|+.++.++++++++.+. +||++||..+.             ..+.++|+.+|..+|++++..+.+++
T Consensus        65 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~~~~~~  143 (287)
T TIGR01214        65 GAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAAGPNAL  143 (287)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHhCCCeE
Confidence                 234567899999999999998885 89999986431             12346799999999999999999999


Q ss_pred             EEEcCcccccCc
Q 024290          223 IIRLWPYWAICS  234 (269)
Q Consensus       223 ilrp~~i~g~~~  234 (269)
                      ++||+++||+..
T Consensus       144 ilR~~~v~G~~~  155 (287)
T TIGR01214       144 IVRTSWLYGGGG  155 (287)
T ss_pred             EEEeeecccCCC
Confidence            999999999864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.87  E-value=1.4e-21  Score=172.39  Aligned_cols=150  Identities=20%  Similarity=0.279  Sum_probs=118.4

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCC-----CCccccccCCCEEEEcCCCCCCcHHHHhcC--ccEEEEc
Q 024290           85 SILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRP-----APADFLRDWGATVVNADLSKPETIPATLVG--VHTVIDC  155 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~-----~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~--~d~vi~~  155 (269)
                      +|+||||||+||++++++|+++|  ++|++++|...     .........+++++.+|++|++++.+++++  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            48999999999999999999987  78998876421     111111223578899999999999999987  8999999


Q ss_pred             CCCCC-------CccchhhcHHHHHHHHHHHHHcCCC-eEEEecccCCC--------------CCCCCcHHHHHHHHHHH
Q 024290          156 ATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNCD--------------KHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       156 ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~SS~~~~--------------~~~~~~y~~sK~~~e~~  213 (269)
                      |+...       .+.++++|+.++.++++++++.+.+ ++|++||..+.              ..+...|+.+|..+|.+
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  160 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHL  160 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHH
Confidence            98422       3345778999999999999987544 89999985421              12345799999999987


Q ss_pred             HH----hcCCCEEEEEcCcccccCc
Q 024290          214 LQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++    +.+++++++||+.+||+..
T Consensus       161 ~~~~~~~~~~~~~i~R~~~i~G~~~  185 (317)
T TIGR01181       161 VRAYHRTYGLPALITRCSNNYGPYQ  185 (317)
T ss_pred             HHHHHHHhCCCeEEEEeccccCCCC
Confidence            75    4689999999999999853

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.87  E-value=9.1e-22  Score=173.77  Aligned_cols=144  Identities=13%  Similarity=0.198  Sum_probs=107.6

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcH----HHHh-----cCccEEEEcC
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI----PATL-----VGVHTVIDCA  156 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l----~~~~-----~~~d~vi~~a  156 (269)
                      ||||||+||||++|+++|+++|++++++.|+.......     ..+.++|+.|..+.    .+++     .++|+|||+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A   76 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG   76 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence            89999999999999999999999877776654322110     12234566554332    3333     2689999999


Q ss_pred             CCC-----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHHHHHHHHh--
Q 024290          157 TGR-----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQD--  216 (269)
Q Consensus       157 g~~-----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~~e~~~~~--  216 (269)
                      +..     .....++.|+.++.+|+++|++.++ +|||+||..+.             ..|.++|+.+|.+.|+++++  
T Consensus        77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  155 (308)
T PRK11150         77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQIL  155 (308)
T ss_pred             eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            732     1223677899999999999999987 79999997431             22456799999999987764  


Q ss_pred             --cCCCEEEEEcCcccccCcc
Q 024290          217 --SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       217 --~gi~~~ilrp~~i~g~~~~  235 (269)
                        .+++++++||+++||+...
T Consensus       156 ~~~~~~~~~lR~~~vyG~~~~  176 (308)
T PRK11150        156 PEANSQICGFRYFNVYGPREG  176 (308)
T ss_pred             HHcCCCEEEEeeeeecCCCCC
Confidence              5899999999999998653

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.87  E-value=2.2e-21  Score=173.77  Aligned_cols=153  Identities=19%  Similarity=0.183  Sum_probs=121.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-----cccc-----ccCCCEEEEcCCCCCCcHHHHhcC--
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-----ADFL-----RDWGATVVNADLSKPETIPATLVG--  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-----~~~~-----~~~~~~~i~~Dl~d~~~l~~~~~~--  148 (269)
                      .++|+||||||+||||++++++|+++|++|++++|+++..     ....     ...+++++.+|++|.+++.++++.  
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   83 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK   83 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence            5678999999999999999999999999999999865421     1110     012478899999999999988874  


Q ss_pred             ccEEEEcCCCC-------CCccchhhcHHHHHHHHHHHHHcCCC-----eEEEecccCCC------------CCCCCcHH
Q 024290          149 VHTVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQ-----KYVFYSIHNCD------------KHPEVPLM  204 (269)
Q Consensus       149 ~d~vi~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v~-----r~V~~SS~~~~------------~~~~~~y~  204 (269)
                      +|+|||||+..       .+....++|+.++.++++++++.+++     +||++||..+.            ..|.++|+
T Consensus        84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~  163 (340)
T PLN02653         84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYA  163 (340)
T ss_pred             CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhH
Confidence            69999999842       22344578999999999999998875     89999886321            12456799


Q ss_pred             HHHHHHHHHHH----hcCCCEEEEEcCcccccC
Q 024290          205 EIKYCTEQFLQ----DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       205 ~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~  233 (269)
                      .+|.++|.+++    +.+++++..|+.+.||+.
T Consensus       164 ~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~  196 (340)
T PLN02653        164 VAKVAAHWYTVNYREAYGLFACNGILFNHESPR  196 (340)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEeeeccccCCC
Confidence            99999999874    368888889999999874

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.86  E-value=3.7e-21  Score=171.89  Aligned_cols=150  Identities=22%  Similarity=0.288  Sum_probs=120.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc------cccCCCEEEEcCCCCCCcHHHHhc--CccEEEEc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF------LRDWGATVVNADLSKPETIPATLV--GVHTVIDC  155 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~  155 (269)
                      |+|+||||+||||+++++.|+++|++|++++|........      +...++.++.+|++|.+.+.++++  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            4799999999999999999999999999998753322111      112346788999999999988886  68999999


Q ss_pred             CCCCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC--------------CCCCCcHHHHHHHHHHHH
Q 024290          156 ATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--------------KHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       156 ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~--------------~~~~~~y~~sK~~~e~~~  214 (269)
                      |+...       ....+++|+.++.+++++|++.++++||++||..+.              ..+..+|+.+|.++|+++
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence            98422       234567899999999999999999999999986431              134678999999999988


Q ss_pred             Hh-----cCCCEEEEEcCcccccC
Q 024290          215 QD-----SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       215 ~~-----~gi~~~ilrp~~i~g~~  233 (269)
                      ++     .+++++++|++++||+.
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~g~~  184 (338)
T PRK10675        161 TDLQKAQPDWSIALLRYFNPVGAH  184 (338)
T ss_pred             HHHHHhcCCCcEEEEEeeeecCCC
Confidence            64     37899999999999864

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.86  E-value=2.9e-20  Score=166.42  Aligned_cols=156  Identities=40%  Similarity=0.577  Sum_probs=122.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcH-HHHhc----Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETI-PATLV----GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l-~~~~~----~~d  150 (269)
                      .+++++|+|+||||.+|+.+++.|+++|+.|.++.|+.++..+.+.    +.+...+..|.....++ ..+.+    +..
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~  155 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV  155 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence            4667899999999999999999999999999999999877666554    45666677666554443 33333    345


Q ss_pred             EEEEcCCCCCCc----cchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC--CCCCcHH------HHHHHHHHHHHhcC
Q 024290          151 TVIDCATGRPEE----PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--HPEVPLM------EIKYCTEQFLQDSG  218 (269)
Q Consensus       151 ~vi~~ag~~~~~----~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~--~~~~~y~------~sK~~~e~~~~~~g  218 (269)
                      +++-++|..+.+    ....+++.|++++++||+.+|++|||++|+++...  .+.+.+.      .+|..+|+++++.|
T Consensus       156 ~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~~~Sg  235 (411)
T KOG1203|consen  156 IVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFLQDSG  235 (411)
T ss_pred             eEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHHHhcC
Confidence            777888755444    34468999999999999999999999999987632  2333333      78999999999999


Q ss_pred             CCEEEEEcCcccccCcc
Q 024290          219 LPHVIIRLWPYWAICST  235 (269)
Q Consensus       219 i~~~ilrp~~i~g~~~~  235 (269)
                      ++|+|||++.+..+...
T Consensus       236 l~ytiIR~g~~~~~~~~  252 (411)
T KOG1203|consen  236 LPYTIIRPGGLEQDTGG  252 (411)
T ss_pred             CCcEEEeccccccCCCC
Confidence            99999999999876544

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.86  E-value=6.6e-21  Score=166.55  Aligned_cols=135  Identities=19%  Similarity=0.180  Sum_probs=110.8

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh------cC-ccEEEEcCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL------VG-VHTVIDCAT  157 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~------~~-~d~vi~~ag  157 (269)
                      +|+||||||++|++++++|+++|++|++++|++++..    ..+++.+.+|+.|++.+.+++      ++ +|.|+++++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            4899999999999999999999999999999876432    246778899999999999998      67 999999987


Q ss_pred             CCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhc-CCCEEEEEcCcccccCc
Q 024290          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDS-GLPHVIIRLWPYWAICS  234 (269)
Q Consensus       158 ~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~-gi~~~ilrp~~i~g~~~  234 (269)
                      ....      ......+++++|++.|++|||++|+.+....     ...+...|+++++. +++|+++||+++|+++.
T Consensus        77 ~~~~------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-----~~~~~~~~~~l~~~~gi~~tilRp~~f~~~~~  143 (285)
T TIGR03649        77 PIPD------LAPPMIKFIDFARSKGVRRFVLLSASIIEKG-----GPAMGQVHAHLDSLGGVEYTVLRPTWFMENFS  143 (285)
T ss_pred             CCCC------hhHHHHHHHHHHHHcCCCEEEEeeccccCCC-----CchHHHHHHHHHhccCCCEEEEeccHHhhhhc
Confidence            4321      1345678999999999999999998765322     12455678888885 99999999999998863

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK05865 hypothetical protein; Provisional

Probab=99.86  E-value=2.7e-21  Score=188.54  Aligned_cols=132  Identities=27%  Similarity=0.422  Sum_probs=117.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCCcc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~  163 (269)
                      |+|+||||+||||+++++.|+++|++|++++|+.....    ..+++++.+|++|.+++.++++++|+|||||+....  
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~----~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~--   74 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSW----PSSADFIAADIRDATAVESAMTGADVVAHCAWVRGR--   74 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhc----ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc--
Confidence            47999999999999999999999999999999743211    125789999999999999999999999999985432  


Q ss_pred             chhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEEEEEcCcccccC
Q 024290          164 IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       164 ~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g~~  233 (269)
                      ..++|+.++.+++++|++.++++|||+||..            |.++|+++++++++++++||+++||+.
T Consensus        75 ~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------K~aaE~ll~~~gl~~vILRp~~VYGP~  132 (854)
T PRK05865         75 NDHINIDGTANVLKAMAETGTGRIVFTSSGH------------QPRVEQMLADCGLEWVAVRCALIFGRN  132 (854)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------HHHHHHHHHHcCCCEEEEEeceEeCCC
Confidence            5689999999999999999999999999863            899999999999999999999999985

>PRK06182 short chain dehydrogenase; Validated

Probab=99.85  E-value=8.8e-21  Score=164.67  Aligned_cols=153  Identities=18%  Similarity=0.188  Sum_probs=120.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~vi  153 (269)
                      |.+|+++||||+|+||++++++|+++|++|++++|+.++..+ +...+++++.+|++|.+++.++++       ++|+||
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li   79 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMED-LASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLV   79 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            356899999999999999999999999999999998655433 223468899999999999888774       789999


Q ss_pred             EcCCCCC-----------CccchhhcHHHH----HHHHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH-
Q 024290          154 DCATGRP-----------EEPIKKVDWEGK----VALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ-  215 (269)
Q Consensus       154 ~~ag~~~-----------~~~~~~~n~~~~----~~li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~-  215 (269)
                      ||+|...           ++..+++|+.+.    ..+++.+++.+.++||++||...  .......|+.+|.+++.+.+ 
T Consensus        80 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~  159 (273)
T PRK06182         80 NNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDA  159 (273)
T ss_pred             ECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHH
Confidence            9999532           233456788774    44555667777789999999764  23334569999999998753 


Q ss_pred             ------hcCCCEEEEEcCcccccCc
Q 024290          216 ------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ------~~gi~~~ilrp~~i~g~~~  234 (269)
                            ..|+++++++||++.+++.
T Consensus       160 l~~e~~~~gi~v~~v~Pg~v~t~~~  184 (273)
T PRK06182        160 LRLEVAPFGIDVVVIEPGGIKTEWG  184 (273)
T ss_pred             HHHHhcccCCEEEEEecCCcccccc
Confidence                  3689999999999998764

>PLN02996 fatty acyl-CoA reductase

Probab=99.85  E-value=8.5e-21  Score=177.52  Aligned_cols=156  Identities=21%  Similarity=0.178  Sum_probs=121.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeCCCCCCc-------cccc-------------------cCCCEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAPA-------DFLR-------------------DWGATV  131 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G---~~V~~~~R~~~~~~-------~~~~-------------------~~~~~~  131 (269)
                      ..+|+|+|||||||||++|++.|++.+   .+|+++.|......       +...                   ..++++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            678999999999999999999999865   36899999653211       1000                   136789


Q ss_pred             EEcCCCCC-------CcHHHHhcCccEEEEcCCCC----CCccchhhcHHHHHHHHHHHHHc-CCCeEEEecccCCCC--
Q 024290          132 VNADLSKP-------ETIPATLVGVHTVIDCATGR----PEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCDK--  197 (269)
Q Consensus       132 i~~Dl~d~-------~~l~~~~~~~d~vi~~ag~~----~~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~~~~--  197 (269)
                      +.+|++++       +.+..+++++|+|||+|+..    +.....++|+.++.+++++|++. ++++||++||..+..  
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~  168 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEK  168 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCC
Confidence            99999843       34667788999999999842    23456679999999999999986 788999999864310  


Q ss_pred             --------------------------------------------------------------CCCCcHHHHHHHHHHHHH
Q 024290          198 --------------------------------------------------------------HPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       198 --------------------------------------------------------------~~~~~y~~sK~~~e~~~~  215 (269)
                                                                                    .+.++|+.+|..+|++++
T Consensus       169 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~  248 (491)
T PLN02996        169 SGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLG  248 (491)
T ss_pred             CceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHH
Confidence                                                                          013569999999999997


Q ss_pred             h--cCCCEEEEEcCcccccCccc
Q 024290          216 D--SGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       216 ~--~gi~~~ilrp~~i~g~~~~~  236 (269)
                      +  .+++++++||+++||+....
T Consensus       249 ~~~~~lpv~i~RP~~V~G~~~~p  271 (491)
T PLN02996        249 NFKENLPLVIIRPTMITSTYKEP  271 (491)
T ss_pred             HhcCCCCEEEECCCEeccCCcCC
Confidence            6  48999999999999986543

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-20  Score=164.30  Aligned_cols=152  Identities=18%  Similarity=0.133  Sum_probs=120.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      ++|+++||||+|+||++++++|+++|++|++++|++++.......  .++.++.+|++|.+++.++++       ++|+|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            467899999999999999999999999999999986543332221  247788999999998877764       58999


Q ss_pred             EEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH
Q 024290          153 IDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       153 i~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~  215 (269)
                      |||+|...           +...+++|+.++.++++++    ++.+.++||++||...  ...+..+|+.+|.++|.+++
T Consensus        83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~  162 (277)
T PRK06180         83 VNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISE  162 (277)
T ss_pred             EECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHHHH
Confidence            99999532           1234679999999988885    3456679999999764  23456789999999987764


Q ss_pred             h-------cCCCEEEEEcCcccccC
Q 024290          216 D-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .       .|+++++++||++++++
T Consensus       163 ~la~e~~~~gi~v~~i~Pg~v~t~~  187 (277)
T PRK06180        163 SLAKEVAPFGIHVTAVEPGSFRTDW  187 (277)
T ss_pred             HHHHHhhhhCcEEEEEecCCcccCc
Confidence            3       58999999999998875

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.85  E-value=8.5e-22  Score=169.86  Aligned_cols=150  Identities=21%  Similarity=0.244  Sum_probs=113.9

Q ss_pred             EEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccc---c----ccCCCE----EEEcCCCCCCcHHHHhc--CccE
Q 024290           86 ILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADF---L----RDWGAT----VVNADLSKPETIPATLV--GVHT  151 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~---~----~~~~~~----~i~~Dl~d~~~l~~~~~--~~d~  151 (269)
                      ||||||+|.||+.|+++|++.+ ..+++++|++.+....   +    ...++.    .+.+|++|.+.+.++++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999998 6899999986543222   1    122343    35899999999999998  8999


Q ss_pred             EEEcCCC-------CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHh-------c
Q 024290          152 VIDCATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQD-------S  217 (269)
Q Consensus       152 vi~~ag~-------~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~-------~  217 (269)
                      |||.|+.       ..+.+..++|+.|+.+++++|.+.++++||++||.-+ ..|.+.||++|..+|.++..       .
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA-v~PtnvmGatKrlaE~l~~~~~~~~~~~  159 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA-VNPTNVMGATKRLAEKLVQAANQYSGNS  159 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC-SS--SHHHHHHHHHHHHHHHHCCTSSSS
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc-CCCCcHHHHHHHHHHHHHHHHhhhCCCC
Confidence            9999993       4456677899999999999999999999999999765 45789999999999999865       2


Q ss_pred             CCCEEEEEcCcccccCccc
Q 024290          218 GLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       218 gi~~~ilrp~~i~g~~~~~  236 (269)
                      +.+++++|.|++.|.-...
T Consensus       160 ~t~f~~VRFGNVlgS~GSV  178 (293)
T PF02719_consen  160 DTKFSSVRFGNVLGSRGSV  178 (293)
T ss_dssp             --EEEEEEE-EETTGTTSC
T ss_pred             CcEEEEEEecceecCCCcH
Confidence            4678999999999965443

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.2e-20  Score=161.80  Aligned_cols=151  Identities=15%  Similarity=0.139  Sum_probs=121.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVID  154 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~vi~  154 (269)
                      .+++++||||+|+||++++++|+++|++|++++|+.++...   ..+++++++|++|++++.++++       .+|+|||
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            45789999999999999999999999999999998654332   2368899999999999988874       4799999


Q ss_pred             cCCCCC-----------CccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH--
Q 024290          155 CATGRP-----------EEPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ--  215 (269)
Q Consensus       155 ~ag~~~-----------~~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~--  215 (269)
                      |+|...           .+..+++|+.++.+++++    +++.+.++||++||...  .......|+.+|.+++.+++  
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  159 (270)
T PRK06179         80 NAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESL  159 (270)
T ss_pred             CCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHHHH
Confidence            999532           134567888888877776    46678889999999754  23334679999999987754  


Q ss_pred             -----hcCCCEEEEEcCcccccCcc
Q 024290          216 -----DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       216 -----~~gi~~~ilrp~~i~g~~~~  235 (269)
                           +.|+++++++||++.+++..
T Consensus       160 ~~el~~~gi~v~~v~pg~~~t~~~~  184 (270)
T PRK06179        160 DHEVRQFGIRVSLVEPAYTKTNFDA  184 (270)
T ss_pred             HHHHhhhCcEEEEEeCCCccccccc
Confidence                 36999999999999887643

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.7e-20  Score=163.44  Aligned_cols=152  Identities=18%  Similarity=0.199  Sum_probs=121.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--------CccEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--------GVHTVI  153 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--------~~d~vi  153 (269)
                      ++|+|+||||+|+||+++++.|+++|++|++++|+++...+ +...+++++.+|++|.++++++++        ++|+||
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~-l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA-LEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            35789999999999999999999999999999998665433 333478899999999988877653        579999


Q ss_pred             EcCCCCCC-----------ccchhhcHHH----HHHHHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH-
Q 024290          154 DCATGRPE-----------EPIKKVDWEG----KVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ-  215 (269)
Q Consensus       154 ~~ag~~~~-----------~~~~~~n~~~----~~~li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~-  215 (269)
                      ||||....           +..+++|+.+    +..+++.+++.+.++||++||...  +..+..+|+.+|.+++.+++ 
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~  161 (277)
T PRK05993         82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLT  161 (277)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHH
Confidence            99984321           2346688888    556777777788889999999754  33456789999999998764 


Q ss_pred             ------hcCCCEEEEEcCcccccCc
Q 024290          216 ------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ------~~gi~~~ilrp~~i~g~~~  234 (269)
                            ..|+++++++||.+.+++.
T Consensus       162 l~~el~~~gi~v~~v~Pg~v~T~~~  186 (277)
T PRK05993        162 LRMELQGSGIHVSLIEPGPIETRFR  186 (277)
T ss_pred             HHHHhhhhCCEEEEEecCCccCchh
Confidence                  4799999999999987653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.85  E-value=6.8e-21  Score=162.42  Aligned_cols=156  Identities=15%  Similarity=0.187  Sum_probs=123.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC------CCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW------GATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~------~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++++++|||||++||.++++.|+++|++|+++.|+.+++.++..+.      .++++.+|++|++++.++..      
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            367889999999999999999999999999999999987655433221      36789999999999988763      


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHH----HHHHHHHcCCCeEEEecccCCC--CCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~----li~a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~  209 (269)
                       .+|++|||||...           .+.++++|+.+...    ++.-+.+.+-++||+++|....  .+....|+++|+.
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~  162 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAF  162 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHH
Confidence             5899999999432           23456678777544    5555567777899999998753  3334569999988


Q ss_pred             HHHHH-------HhcCCCEEEEEcCcccccCcc
Q 024290          210 TEQFL-------QDSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       210 ~e~~~-------~~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +-.+.       +..|+.++.+.||.+...+..
T Consensus       163 v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~  195 (265)
T COG0300         163 VLSFSEALREELKGTGVKVTAVCPGPTRTEFFD  195 (265)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEEecCcccccccc
Confidence            76543       448999999999999998764

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.84  E-value=3.3e-21  Score=163.68  Aligned_cols=149  Identities=36%  Similarity=0.510  Sum_probs=119.3

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-CccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCCccc
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPI  164 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~  164 (269)
                      |+|+||||.+|+.+++.|++.+++|+++.|+... ..+.+...+++++.+|+.|++.+.++|+++|+||.+.+...    
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~----   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH----   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC----
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch----
Confidence            7999999999999999999999999999998632 23345667999999999999999999999999999988543    


Q ss_pred             hhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC-----CCCCcHHHHHHHHHHHHHhcCCCEEEEEcCcccccCcccccc
Q 024290          165 KKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-----HPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRR  239 (269)
Q Consensus       165 ~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~-----~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g~~~~~~~~  239 (269)
                       ........+++++++++|+++||+.|......     .|..++...|..+|+++++.+++|++||||++++++..+...
T Consensus        77 -~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~  155 (233)
T PF05368_consen   77 -PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPFAP  155 (233)
T ss_dssp             -CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHH
T ss_pred             -hhhhhhhhhHHHhhhccccceEEEEEecccccccccccccchhhhhhhhhhhhhhhccccceeccccchhhhhhhhhcc
Confidence             23456778999999999999999765543331     123456788999999999999999999999999987654433

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.1e-20  Score=162.45  Aligned_cols=151  Identities=19%  Similarity=0.196  Sum_probs=119.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc--cCCCEEEEcCCCCCCcHHHHhc-------CccEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVHTVI  153 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--~~~~~~i~~Dl~d~~~l~~~~~-------~~d~vi  153 (269)
                      .|++|||||+|+||++++++|+++|++|+++.|+.+...+...  ..++.++++|++|.+++.++++       ++|+||
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4789999999999999999999999999999997654332221  1257889999999998877653       589999


Q ss_pred             EcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHHh
Q 024290          154 DCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       154 ~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~~  216 (269)
                      ||+|...           ++..+++|+.++.++++++    ++.+.++||++||...  ...+..+|+.+|.++|.+++.
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~  161 (276)
T PRK06482         82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEA  161 (276)
T ss_pred             ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHH
Confidence            9998422           1234568999999999887    5667789999999764  234567899999999977642


Q ss_pred             -------cCCCEEEEEcCcccccC
Q 024290          217 -------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       217 -------~gi~~~ilrp~~i~g~~  233 (269)
                             .|++++++|||.+.+++
T Consensus       162 l~~~~~~~gi~v~~v~pg~~~t~~  185 (276)
T PRK06482        162 VAQEVAPFGIEFTIVEPGPARTNF  185 (276)
T ss_pred             HHHHhhccCcEEEEEeCCccccCC
Confidence                   69999999999985554

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.4e-20  Score=182.26  Aligned_cols=150  Identities=21%  Similarity=0.286  Sum_probs=119.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHH--HCCCeEEEEeCCCCCC--cccc---ccCCCEEEEcCCCCCC------cHHHHhcCcc
Q 024290           84 TSILVVGATGTLGRQIVRRAL--DEGYDVRCLVRPRPAP--ADFL---RDWGATVVNADLSKPE------TIPATLVGVH  150 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll--~~G~~V~~~~R~~~~~--~~~~---~~~~~~~i~~Dl~d~~------~l~~~~~~~d  150 (269)
                      |+|||||||||||++|++.|+  ++|++|++++|+....  ....   ...+++++.+|++|++      .+.++ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            479999999999999999999  5799999999964321  1111   1135889999999853      34444 8899


Q ss_pred             EEEEcCCCC----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC---------------CCCCCcHHHHHHHHH
Q 024290          151 TVIDCATGR----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD---------------KHPEVPLMEIKYCTE  211 (269)
Q Consensus       151 ~vi~~ag~~----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~---------------~~~~~~y~~sK~~~e  211 (269)
                      +|||||+..    ......++|+.++.+++++|++.++++||++||..+.               ..+.++|+.+|.+.|
T Consensus        80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  159 (657)
T PRK07201         80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAE  159 (657)
T ss_pred             EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHH
Confidence            999999842    2344667899999999999999999999999987542               112357999999999


Q ss_pred             HHHH-hcCCCEEEEEcCcccccCc
Q 024290          212 QFLQ-DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~-~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++++ ..+++++++||+++||+..
T Consensus       160 ~~~~~~~g~~~~ilRp~~v~G~~~  183 (657)
T PRK07201        160 KLVREECGLPWRVYRPAVVVGDSR  183 (657)
T ss_pred             HHHHHcCCCcEEEEcCCeeeecCC
Confidence            9997 4789999999999999743

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.84  E-value=1.1e-20  Score=166.25  Aligned_cols=135  Identities=18%  Similarity=0.173  Sum_probs=110.1

Q ss_pred             EEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCC-----
Q 024290           87 LVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGR-----  159 (269)
Q Consensus        87 lVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~-----  159 (269)
                      |||||+||||++|++.|+++|++|+++.+.               ..+|++|.+++.++++  ++|+|||||+..     
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~   65 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHA   65 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccch
Confidence            699999999999999999999988866542               1479999999998886  479999999731     


Q ss_pred             ---CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC-----------------CCCC-cHHHHHHHHHHHHH---
Q 024290          160 ---PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-----------------HPEV-PLMEIKYCTEQFLQ---  215 (269)
Q Consensus       160 ---~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~-----------------~~~~-~y~~sK~~~e~~~~---  215 (269)
                         .+..+++.|+.++.+++++|++.++++||++||..+..                 .|.+ .|+.+|.+.|++++   
T Consensus        66 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~  145 (306)
T PLN02725         66 NMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYR  145 (306)
T ss_pred             hhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHH
Confidence               23456778999999999999999999999999964311                 1222 49999999997653   


Q ss_pred             -hcCCCEEEEEcCcccccCccc
Q 024290          216 -DSGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       216 -~~gi~~~ilrp~~i~g~~~~~  236 (269)
                       ..+++++++||+++||+...+
T Consensus       146 ~~~~~~~~~~R~~~vyG~~~~~  167 (306)
T PLN02725        146 IQYGWDAISGMPTNLYGPHDNF  167 (306)
T ss_pred             HHhCCCEEEEEecceeCCCCCC
Confidence             579999999999999997543

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.84  E-value=1.1e-20  Score=172.92  Aligned_cols=167  Identities=19%  Similarity=0.262  Sum_probs=136.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCcc---ccc----cCCCEEEEcCCCCCCcHHHHhcC--cc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPAD---FLR----DWGATVVNADLSKPETIPATLVG--VH  150 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~---~~~----~~~~~~i~~Dl~d~~~l~~~~~~--~d  150 (269)
                      +.+|+|+||||+|-||+.+++++++.+ .++++++|++.+...   .+.    .....++-||+.|.+.+.+++++  +|
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd  327 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD  327 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence            678999999999999999999999988 588888997654321   111    24678889999999999999988  99


Q ss_pred             EEEEcCCC-------CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhc------
Q 024290          151 TVIDCATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDS------  217 (269)
Q Consensus       151 ~vi~~ag~-------~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~------  217 (269)
                      +|||.|+.       .++.+...+|+.|+.|++++|.+.|+++||++||.-+ ..|.+.||.+|...|++++..      
T Consensus       328 ~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA-V~PtNvmGaTKr~aE~~~~a~~~~~~~  406 (588)
T COG1086         328 IVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA-VNPTNVMGATKRLAEKLFQAANRNVSG  406 (588)
T ss_pred             eEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc-cCCchHhhHHHHHHHHHHHHHhhccCC
Confidence            99999983       4456677899999999999999999999999999754 567899999999999988542      


Q ss_pred             -CCCEEEEEcCcccccCccc---ccceeEeCCCcc
Q 024290          218 -GLPHVIIRLWPYWAICSTY---TRREVCLGNGCT  248 (269)
Q Consensus       218 -gi~~~ilrp~~i~g~~~~~---~~~~~~~~~~~~  248 (269)
                       +.+++++|.|++.|.-..-   +...+..|....
T Consensus       407 ~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplT  441 (588)
T COG1086         407 TGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLT  441 (588)
T ss_pred             CCcEEEEEEecceecCCCCCHHHHHHHHHcCCCcc
Confidence             3679999999999976553   334445554433

>PRK06196 oxidoreductase; Provisional

Probab=99.84  E-value=2e-20  Score=165.99  Aligned_cols=157  Identities=18%  Similarity=0.122  Sum_probs=119.5

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      ..+.+|+|+||||+|+||++++++|+++|++|++++|+.++..+...+ .++.++++|++|.+++++++       .++|
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD  101 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRID  101 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCC
Confidence            346789999999999999999999999999999999986544332222 24788999999999887776       3689


Q ss_pred             EEEEcCCCCC---------CccchhhcHHHHHHHHH----HHHHcCCCeEEEecccCCC--------------CCCCCcH
Q 024290          151 TVIDCATGRP---------EEPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCD--------------KHPEVPL  203 (269)
Q Consensus       151 ~vi~~ag~~~---------~~~~~~~n~~~~~~li~----a~~~~~v~r~V~~SS~~~~--------------~~~~~~y  203 (269)
                      +||||||...         ++..+++|+.++..+++    .+++.+.++||++||....              ..+...|
T Consensus       102 ~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y  181 (315)
T PRK06196        102 ILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAY  181 (315)
T ss_pred             EEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHH
Confidence            9999998421         23456788888665555    4555566799999986431              1122469


Q ss_pred             HHHHHHHHHHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          204 MEIKYCTEQFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       204 ~~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+|.+.+.+.+       ..|+++++++||++++++..
T Consensus       182 ~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~  220 (315)
T PRK06196        182 GQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQR  220 (315)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccc
Confidence            999999887653       25899999999999998643

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.84  E-value=1.5e-20  Score=161.80  Aligned_cols=153  Identities=11%  Similarity=0.064  Sum_probs=119.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---cC--CCEEEEcCCCCCCcHHHHhc-------C
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---DW--GATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~~--~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      +++|+++||||+|+||+++++.|+++|++|++++|+++...+..+   +.  .+.++++|++|.+.+.++++       +
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            667899999999999999999999999999999998754332221   11  36678999999998877764       4


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHH----HHHHHHHH-HHcCCCeEEEecccCCC--CCCCCcHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEG----KVALIQCA-KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~----~~~li~a~-~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~  210 (269)
                      +|+||||+|...           ++..+++|+.+    +.++++.+ ++.+.++||++||....  ..+...|+.+|.++
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~  164 (262)
T PRK13394         85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGL  164 (262)
T ss_pred             CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHH
Confidence            899999998532           12334578888    55667777 66778899999997543  33456799999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccC
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+++.       .+++++++|||.++++.
T Consensus       165 ~~~~~~la~~~~~~~i~v~~v~pg~v~~~~  194 (262)
T PRK13394        165 LGLARVLAKEGAKHNVRSHVVCPGFVRTPL  194 (262)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCcccchh
Confidence            877642       58999999999999875

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=4e-20  Score=157.31  Aligned_cols=155  Identities=18%  Similarity=0.143  Sum_probs=119.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc----c--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----R--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~----~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +++|+|+||||+|+||++++++|+++|++|+++.|+..+..+.+    .  ..++.++.+|+.|++.+.++++       
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            56689999999999999999999999999988887654321111    1  2347889999999998887763       


Q ss_pred             CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~  210 (269)
                      ++|+|||++|....           +..+++|+.+..++++.+    ++.+.++||++||....  ......|+.+|.++
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~  163 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGL  163 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHH
Confidence            57999999994322           233557888888887776    56678899999997653  33456799999988


Q ss_pred             HHHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          211 EQFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       211 e~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+++       ..+++++++|||+++++...
T Consensus       164 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~  195 (249)
T PRK12825        164 VGLTKALARELAEYGITVNMVAPGDIDTDMKE  195 (249)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEECCccCCccc
Confidence            86653       36899999999999998644

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.84  E-value=3.1e-20  Score=159.89  Aligned_cols=153  Identities=20%  Similarity=0.116  Sum_probs=116.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---ccc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.. ..+.   +..  ..+.++.+|++|.+++.++++       
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            367899999999999999999999999999999999742 1111   111  236678999999888777653       


Q ss_pred             CccEEEEcCCCCC------------CccchhhcHHHHHH----HHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHH
Q 024290          148 GVHTVIDCATGRP------------EEPIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTE  211 (269)
Q Consensus       148 ~~d~vi~~ag~~~------------~~~~~~~n~~~~~~----li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e  211 (269)
                      ++|+||||||...            ++..+++|+.++..    +++.+++.+.++||++||......+..+|+.+|.+++
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~Y~~sK~a~~  163 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGINRVPYSAAKGGVN  163 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCCCCccHHHHHHHH
Confidence            6899999998421            11234567776654    4455556677799999998765555678999999999


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccC
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .+++.       .|+++++++||+++++.
T Consensus       164 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  192 (260)
T PRK12823        164 ALTASLAFEYAEHGIRVNAVAPGGTEAPP  192 (260)
T ss_pred             HHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence            87643       48999999999999974

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.83  E-value=4e-20  Score=158.93  Aligned_cols=149  Identities=20%  Similarity=0.273  Sum_probs=124.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc-------c-cccCCCEEEEcCCCCCCcHHHHhc--CccEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD-------F-LRDWGATVVNADLSKPETIPATLV--GVHTV  152 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~-------~-~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~v  152 (269)
                      .++||||||+||||+|.+-+|+++||.|++++.-.....+       . .+...+.++++|+.|.+.|+++|+  ++|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            4689999999999999999999999999999863322111       1 112468999999999999999996  58999


Q ss_pred             EEcCCC-------CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-------------CC-CCCCcHHHHHHHHH
Q 024290          153 IDCATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------------DK-HPEVPLMEIKYCTE  211 (269)
Q Consensus       153 i~~ag~-------~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-------------~~-~~~~~y~~sK~~~e  211 (269)
                      +|.|+.       ..+..++..|+.|+.+|++.|++.+++.+||.||..+             +. .|.++|+.+|..+|
T Consensus        82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE  161 (343)
T KOG1371|consen   82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIE  161 (343)
T ss_pred             EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHH
Confidence            999982       3456778899999999999999999999999998753             22 37789999999999


Q ss_pred             HHHHh----cCCCEEEEEcCcccc
Q 024290          212 QFLQD----SGLPHVIIRLWPYWA  231 (269)
Q Consensus       212 ~~~~~----~gi~~~ilrp~~i~g  231 (269)
                      +.+..    .++.++.||..+.+|
T Consensus       162 ~i~~d~~~~~~~~~~~LRyfn~~g  185 (343)
T KOG1371|consen  162 EIIHDYNKAYGWKVTGLRYFNVIG  185 (343)
T ss_pred             HHHHhhhccccceEEEEEeccccC
Confidence            98865    568889999999999

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.83  E-value=7.8e-20  Score=161.83  Aligned_cols=150  Identities=25%  Similarity=0.334  Sum_probs=119.5

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc----CCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD----WGATVVNADLSKPETIPATLV--GVHTVIDCATG  158 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~----~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~  158 (269)
                      +|+||||+|+||+++++.|+++|++|++++|......+.+..    .+++++.+|+.+.+.+.++++  ++|+||||+|.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            589999999999999999999999999887643221111111    146788999999999999885  69999999984


Q ss_pred             C-------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHh--
Q 024290          159 R-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQD--  216 (269)
Q Consensus       159 ~-------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~-------------~~~~~y~~sK~~~e~~~~~--  216 (269)
                      .       .....++.|+.++.++++++++.++++||++||.....             .+..+|+.+|.++|.+++.  
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~  160 (328)
T TIGR01179        81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLS  160 (328)
T ss_pred             cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHH
Confidence            2       23345678999999999999999999999999864311             2346799999999988753  


Q ss_pred             ---cCCCEEEEEcCcccccCc
Q 024290          217 ---SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 ---~gi~~~ilrp~~i~g~~~  234 (269)
                         .+++++++||+.+||+..
T Consensus       161 ~~~~~~~~~ilR~~~v~g~~~  181 (328)
T TIGR01179       161 KADPGLSYVILRYFNVAGADP  181 (328)
T ss_pred             HhccCCCEEEEecCcccCCCC
Confidence               689999999999999853

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.83  E-value=5.5e-20  Score=162.38  Aligned_cols=147  Identities=14%  Similarity=0.225  Sum_probs=114.6

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc----CccEEEEcCCCC-
Q 024290           86 ILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV----GVHTVIDCATGR-  159 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~----~~d~vi~~ag~~-  159 (269)
                      ||||||+||||+++++.|+++|+ +|++++|..... . +.......+.+|+.+.+.++.+.+    ++|+|||+|+.. 
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~   78 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSD   78 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccC
Confidence            69999999999999999999997 788887754321 1 111223456788888877777653    799999999842 


Q ss_pred             ----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHHHHHHHHh------
Q 024290          160 ----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQD------  216 (269)
Q Consensus       160 ----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~~e~~~~~------  216 (269)
                          ++...+++|+.++.+++++|++.++ +||++||..+.             ..|.++|+.+|..+|.++++      
T Consensus        79 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  157 (314)
T TIGR02197        79 TTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEA  157 (314)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhc
Confidence                2344567899999999999999887 89999996532             12556799999999998864      


Q ss_pred             cCCCEEEEEcCcccccCcc
Q 024290          217 SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       217 ~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+++++++||+.+||+...
T Consensus       158 ~~~~~~~lR~~~vyG~~~~  176 (314)
T TIGR02197       158 LSAQVVGLRYFNVYGPREY  176 (314)
T ss_pred             cCCceEEEEEeeccCCCCC
Confidence            3578999999999998754

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.83  E-value=4.5e-20  Score=165.70  Aligned_cols=148  Identities=23%  Similarity=0.298  Sum_probs=117.6

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCC------ccccc---------c-CCCEEEEcCCCCC------C
Q 024290           85 SILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAP------ADFLR---------D-WGATVVNADLSKP------E  140 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~------~~~~~---------~-~~~~~i~~Dl~d~------~  140 (269)
                      +|+|||||||||++|++.|+++|  ++|+++.|+.+..      .+.+.         . .+++++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  6799999975521      01000         0 3688999999865      3


Q ss_pred             cHHHHhcCccEEEEcCCCC----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCC------------------
Q 024290          141 TIPATLVGVHTVIDCATGR----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH------------------  198 (269)
Q Consensus       141 ~l~~~~~~~d~vi~~ag~~----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~------------------  198 (269)
                      .+..+.+++|+|||||+..    +.+.+.++|+.++.++++++.+.++++||++||.++...                  
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~  160 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPG  160 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccc
Confidence            4566668899999999843    234456789999999999999999989999999764211                  


Q ss_pred             CCCcHHHHHHHHHHHHHh---cCCCEEEEEcCccccc
Q 024290          199 PEVPLMEIKYCTEQFLQD---SGLPHVIIRLWPYWAI  232 (269)
Q Consensus       199 ~~~~y~~sK~~~e~~~~~---~gi~~~ilrp~~i~g~  232 (269)
                      +..+|+.+|...|.++++   .|++++++|||.++|+
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       161 LAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGN  197 (367)
T ss_pred             cCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeec
Confidence            124699999999998865   4999999999999996

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.7e-19  Score=155.29  Aligned_cols=152  Identities=19%  Similarity=0.163  Sum_probs=119.0

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-------cCccE
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-------VGVHT  151 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-------~~~d~  151 (269)
                      ..+++|+++||||+|+||+++++.|+++|++|++++|+.+...    ...+.++++|+.|.+++.+++       .++|+
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL----PEGVEFVAADLTTAEGCAAVARAVLERLGGVDI   80 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc----CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3577899999999999999999999999999999999754321    225778999999998877654       46899


Q ss_pred             EEEcCCCCC-------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCCCC---CCCcHHHHHHHHH
Q 024290          152 VIDCATGRP-------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDKH---PEVPLMEIKYCTE  211 (269)
Q Consensus       152 vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~~~---~~~~y~~sK~~~e  211 (269)
                      ||||+|...             ++..+++|+.++..+.+++    ++.+.++||++||......   ...+|+.+|.+++
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~  160 (260)
T PRK06523         81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALS  160 (260)
T ss_pred             EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHHH
Confidence            999998421             2334568888887665544    5556679999999765322   4678999999998


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccCc
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.       .|+++++++||++.++..
T Consensus       161 ~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~  190 (260)
T PRK06523        161 TYSKSLSKEVAPKGVRVNTVSPGWIETEAA  190 (260)
T ss_pred             HHHHHHHHHHhhcCcEEEEEecCcccCccH
Confidence            77643       589999999999998753

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.83  E-value=6.3e-20  Score=157.37  Aligned_cols=154  Identities=18%  Similarity=0.099  Sum_probs=119.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      |++++++||||+|+||++++++|+++|++|++++|++++..+...     ..++.++.+|++|++++.++++       +
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            456899999999999999999999999999999998664433221     1257789999999998887764       6


Q ss_pred             ccEEEEcCCCCCC-----------ccchhhcHHHHH----HHHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          149 VHTVIDCATGRPE-----------EPIKKVDWEGKV----ALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       149 ~d~vi~~ag~~~~-----------~~~~~~n~~~~~----~li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      +|+||||++....           +..+++|+.++.    .+++++++.+.++||++||...  +..+..+|+.+|.+.+
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~  161 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLI  161 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHH
Confidence            8999999984221           123457777744    4555556677889999998754  3445678999999988


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccCc
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.+.       .++++++++||+++++..
T Consensus       162 ~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~  191 (258)
T PRK12429        162 GLTKVVALEGATHGVTVNAICPGYVDTPLV  191 (258)
T ss_pred             HHHHHHHHHhcccCeEEEEEecCCCcchhh
Confidence            76642       589999999999998764

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4e-20  Score=160.76  Aligned_cols=154  Identities=14%  Similarity=0.112  Sum_probs=119.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc--cCCCEEEEcCCCCCCcHHHHhc-------CccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--~~~~~~i~~Dl~d~~~l~~~~~-------~~d~  151 (269)
                      |++|+|+||||+|+||++++++|+++|++|++++|+.+...+...  ...+.++++|++|.+++.++++       ++|+
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            356789999999999999999999999999999998654332222  1246788999999988877653       5799


Q ss_pred             EEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 024290          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       152 vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~  214 (269)
                      ||||+|...           ++..+++|+.++..+++++    ++.+.+++|++||...  +......|+.+|.+++.+.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~  160 (275)
T PRK08263         81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMS  160 (275)
T ss_pred             EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHH
Confidence            999999432           2345668999987777665    5667789999999754  2334567999999988765


Q ss_pred             H-------hcCCCEEEEEcCcccccCc
Q 024290          215 Q-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       215 ~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      +       ..|++++++|||.+.+++.
T Consensus       161 ~~la~e~~~~gi~v~~v~Pg~~~t~~~  187 (275)
T PRK08263        161 EALAQEVAEFGIKVTLVEPGGYSTDWA  187 (275)
T ss_pred             HHHHHHhhhhCcEEEEEecCCccCCcc
Confidence            3       3689999999999987654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=5.1e-20  Score=157.31  Aligned_cols=154  Identities=18%  Similarity=0.069  Sum_probs=119.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc----CCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD----WGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~----~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      +.+++++||||+|+||+++++.|+++|++|++++|++++..+....    ..+.++.+|+.|++++.++++       ++
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5678999999999999999999999999999999986544332221    246789999999999987764       57


Q ss_pred             cEEEEcCCCCC------------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          150 HTVIDCATGRP------------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       150 d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      |+|||++|...            ++..+++|+.++..+++.+.    +.+.++||++||...  +..+...|+.+|.+.+
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~  162 (251)
T PRK07231         83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVI  162 (251)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHH
Confidence            99999998521            12345678888776666554    466789999999765  3445567999999988


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccCc
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.       .+++++.++||++.+++.
T Consensus       163 ~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~  192 (251)
T PRK07231        163 TLTKALAAELGPDKIRVNAVAPVVVETGLL  192 (251)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEECccCCCcc
Confidence            76642       489999999999987653

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.83  E-value=2e-20  Score=160.68  Aligned_cols=145  Identities=26%  Similarity=0.369  Sum_probs=97.6

Q ss_pred             EECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCC------Ccccc------------ccCCCEEEEcCCCCC------Cc
Q 024290           88 VVGATGTLGRQIVRRALDEGY--DVRCLVRPRPA------PADFL------------RDWGATVVNADLSKP------ET  141 (269)
Q Consensus        88 VtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~------~~~~~------------~~~~~~~i~~Dl~d~------~~  141 (269)
                      |||||||+|++|+++|++++.  +|+++.|..+.      ..+.+            ...+++++.+|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  99999997532      10111            134799999999985      34


Q ss_pred             HHHHhcCccEEEEcCCC----CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC----C-----------------
Q 024290          142 IPATLVGVHTVIDCATG----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC----D-----------------  196 (269)
Q Consensus       142 l~~~~~~~d~vi~~ag~----~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~----~-----------------  196 (269)
                      +..+.+.+|+|||||+.    .+.+...++|+.|+.++++.|.+.+.++|+|+||..+    .                 
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~  160 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP  160 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred             hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence            55666789999999994    3456678899999999999999777779999999422    1                 


Q ss_pred             -CCCCCcHHHHHHHHHHHHHh----cCCCEEEEEcCccccc
Q 024290          197 -KHPEVPLMEIKYCTEQFLQD----SGLPHVIIRLWPYWAI  232 (269)
Q Consensus       197 -~~~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~i~g~  232 (269)
                       ....++|..+|+..|+++++    .|++++|+|||.++|.
T Consensus       161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGD  201 (249)
T ss_dssp             -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-S
T ss_pred             hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCccccc
Confidence             01124699999999999865    3999999999999994

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.82  E-value=4.4e-20  Score=160.69  Aligned_cols=153  Identities=16%  Similarity=0.165  Sum_probs=119.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c----cCCCEEEEcCCCCCCcHHHHh-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R----DWGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~----~~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      |++++++||||+|+||+++++.|+++|++|++++|+++...+..   .    ...++++.+|++|++++.+ +       
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            45678999999999999999999999999999999865432221   1    1357889999999988765 3       


Q ss_pred             cCccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          147 VGVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       147 ~~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      .++|+||||+|....           +..+++|+.++.++++++    ++.+.++||++||...  +..+..+|+.+|.+
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~  159 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYA  159 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHH
Confidence            457999999984221           234568888888777774    6667789999998654  34456789999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+++.       .|++++++|||.++++..
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~  191 (280)
T PRK06914        160 LEGFSESLRLELKPFGIDVALIEPGSYNTNIW  191 (280)
T ss_pred             HHHHHHHHHHHhhhhCCEEEEEecCCcccchh
Confidence            9887653       589999999999998753

>PLN02253 xanthoxin dehydrogenase

Probab=99.82  E-value=1.1e-19  Score=158.35  Aligned_cols=154  Identities=12%  Similarity=0.060  Sum_probs=120.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+...+...    ..++.++++|++|.+++.++++       +
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~   94 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT   94 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999999987543322211    1257889999999999888774       6


Q ss_pred             ccEEEEcCCCCC-------------CccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          149 VHTVIDCATGRP-------------EEPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       149 ~d~vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      +|+||||||...             ++..+++|+.++.++++++..    .+.+++|++||...  +......|+.+|.+
T Consensus        95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
T PLN02253         95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHA  174 (280)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHH
Confidence            899999998421             124567899999888877653    34468999988754  23345689999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +|.+.+.       .++++++++||.+.++.
T Consensus       175 ~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~  205 (280)
T PLN02253        175 VLGLTRSVAAELGKHGIRVNCVSPYAVPTAL  205 (280)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence            9987753       58999999999998764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.82  E-value=2.9e-20  Score=159.72  Aligned_cols=155  Identities=14%  Similarity=0.124  Sum_probs=121.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---ccc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|++++..+.   +..  ..+.++.+|++|.+++.++++       
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            36789999999999999999999999999999999976543222   112  136788999999998888764       


Q ss_pred             CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++|+||||+|....           +..+++|+.++.++++++.+    .+.++||++||...  ......+|+.+|.++
T Consensus        87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~  166 (255)
T PRK07523         87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAV  166 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHH
Confidence            48999999985321           23455888898888887754    35679999998764  334557899999999


Q ss_pred             HHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          211 EQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+++       ..|+++++++||.+.++..
T Consensus       167 ~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~  197 (255)
T PRK07523        167 GNLTKGMATDWAKHGLQCNAIAPGYFDTPLN  197 (255)
T ss_pred             HHHHHHHHHHhhHhCeEEEEEEECcccCchh
Confidence            88764       3689999999999998853

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.1e-19  Score=156.56  Aligned_cols=151  Identities=18%  Similarity=0.148  Sum_probs=117.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc---C-CCEEEEcCCCCCCcHHHHhc-------CccE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD---W-GATVVNADLSKPETIPATLV-------GVHT  151 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~---~-~~~~i~~Dl~d~~~l~~~~~-------~~d~  151 (269)
                      +|+|+||||+|+||+++++.|+++|++|++++|+.+...+..++   . ++.++.+|++|++++.++++       .+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            47899999999999999999999999999999986543322211   1 57889999999998877763       3799


Q ss_pred             EEEcCCCCC------------CccchhhcHHHHHHHHH----HHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          152 VIDCATGRP------------EEPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       152 vi~~ag~~~------------~~~~~~~n~~~~~~li~----a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      +|||+|...            ++..+++|+.++..+++    ++++.+.++||++||...  +......|+.+|.+++.+
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  161 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKY  161 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHHH
Confidence            999998421            12345688888877665    556667789999998754  234456799999999987


Q ss_pred             HH-------hcCCCEEEEEcCcccccC
Q 024290          214 LQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       214 ~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      ++       ..|+++++++||.+.++.
T Consensus       162 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~  188 (257)
T PRK07024        162 LESLRVELRPAGVRVVTIAPGYIRTPM  188 (257)
T ss_pred             HHHHHHHhhccCcEEEEEecCCCcCch
Confidence            63       368999999999998875

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.1e-19  Score=155.94  Aligned_cols=154  Identities=14%  Similarity=0.046  Sum_probs=119.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC-CCEEEEcCCCCCCcHHHHh-------cCccE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPATL-------VGVHT  151 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~-~~~~i~~Dl~d~~~l~~~~-------~~~d~  151 (269)
                      .|++++++||||+|+||+++++.|+++|++|++++|++++..+..... .+.++.+|++|++++.+++       .++|+
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            366789999999999999999999999999999999865544333222 3788999999998876665       36899


Q ss_pred             EEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 024290          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       152 vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~  214 (269)
                      +|||+|...           .+..+++|+.++..+++++    ++.+.++||++||...  +......|+.+|.+++.+.
T Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~  161 (273)
T PRK07825         82 LVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFT  161 (273)
T ss_pred             EEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHH
Confidence            999999432           1234568888877765554    5667789999999764  3344567999999887654


Q ss_pred             -------HhcCCCEEEEEcCcccccC
Q 024290          215 -------QDSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       215 -------~~~gi~~~ilrp~~i~g~~  233 (269)
                             +..|+++++++||++.+++
T Consensus       162 ~~l~~el~~~gi~v~~v~Pg~v~t~~  187 (273)
T PRK07825        162 DAARLELRGTGVHVSVVLPSFVNTEL  187 (273)
T ss_pred             HHHHHHhhccCcEEEEEeCCcCcchh
Confidence                   3469999999999997764

>PRK05717 oxidoreductase; Validated

Probab=99.82  E-value=2.5e-19  Score=153.95  Aligned_cols=154  Identities=13%  Similarity=0.033  Sum_probs=119.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...+  ..+.++++|++|.+++.+++       .++|
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   86 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLD   86 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            47789999999999999999999999999999998875443332222  24778999999998876654       3579


Q ss_pred             EEEEcCCCCCC-------------ccchhhcHHHHHHHHHHHHH---cCCCeEEEecccCCC--CCCCCcHHHHHHHHHH
Q 024290          151 TVIDCATGRPE-------------EPIKKVDWEGKVALIQCAKA---MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       151 ~vi~~ag~~~~-------------~~~~~~n~~~~~~li~a~~~---~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~  212 (269)
                      +||||+|....             +..+++|+.++.++++++.+   ...++||++||....  .....+|+.+|.+++.
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~  166 (255)
T PRK05717         87 ALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLLA  166 (255)
T ss_pred             EEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHHHHHHH
Confidence            99999995321             24567899999999999863   223689999987642  3345689999999998


Q ss_pred             HHHh------cCCCEEEEEcCcccccC
Q 024290          213 FLQD------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       213 ~~~~------~gi~~~ilrp~~i~g~~  233 (269)
                      +++.      .++++++++||++.++.
T Consensus       167 ~~~~la~~~~~~i~v~~i~Pg~i~t~~  193 (255)
T PRK05717        167 LTHALAISLGPEIRVNAVSPGWIDARD  193 (255)
T ss_pred             HHHHHHHHhcCCCEEEEEecccCcCCc
Confidence            7753      35899999999998865

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=8.9e-20  Score=156.76  Aligned_cols=154  Identities=16%  Similarity=0.091  Sum_probs=118.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      .+.+|+++||||+|+||+++++.|+++|++|+++.++.+...+.+...++.++.+|++|++++.++++       ++|+|
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   83 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVL   83 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            36679999999999999999999999999999887765433333333468899999999998887763       68999


Q ss_pred             EEcCCCCC-----------CccchhhcHHHHHHH----HHHHHHcCCCeEEEecccCCC---CCCCCcHHHHHHHHHHHH
Q 024290          153 IDCATGRP-----------EEPIKKVDWEGKVAL----IQCAKAMGIQKYVFYSIHNCD---KHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       153 i~~ag~~~-----------~~~~~~~n~~~~~~l----i~a~~~~~v~r~V~~SS~~~~---~~~~~~y~~sK~~~e~~~  214 (269)
                      |||+|...           ++..+++|+.++..+    ++.+++.+.++||++||....   ......|+.+|.+++.++
T Consensus        84 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~  163 (255)
T PRK06463         84 VNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILT  163 (255)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHH
Confidence            99998521           223456888886554    444555566799999997543   233466999999998876


Q ss_pred             Hh-------cCCCEEEEEcCcccccC
Q 024290          215 QD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       215 ~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.       .|+++++++||++..++
T Consensus       164 ~~la~e~~~~~i~v~~i~Pg~v~t~~  189 (255)
T PRK06463        164 RRLAFELGKYGIRVNAVAPGWVETDM  189 (255)
T ss_pred             HHHHHHhhhcCeEEEEEeeCCCCCch
Confidence            43       58999999999997764

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1e-19  Score=156.17  Aligned_cols=152  Identities=19%  Similarity=0.158  Sum_probs=116.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c--cCCCEEEEcCCCCCCcHHHHhc-CccEEEEcC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R--DWGATVVNADLSKPETIPATLV-GVHTVIDCA  156 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~~-~~d~vi~~a  156 (269)
                      +++++||||+|+||+++++.|+++|++|++++|+++...+..   .  ..++.++.+|++|++++.+++. ++|+||||+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            578999999999999999999999999999999754332211   1  1257889999999999988886 899999999


Q ss_pred             CCCC-----------CccchhhcHHHHHHHH----HHHHHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH----
Q 024290          157 TGRP-----------EEPIKKVDWEGKVALI----QCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ----  215 (269)
Q Consensus       157 g~~~-----------~~~~~~~n~~~~~~li----~a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~----  215 (269)
                      |...           .+..+++|+.+...+.    +.+++.+.++||++||....  ......|+.+|.++|.+.+    
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~  161 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHA  161 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHHH
Confidence            8432           1234557777766544    44556677899999987542  2335679999999987653    


Q ss_pred             ---hcCCCEEEEEcCcccccCc
Q 024290          216 ---DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ---~~gi~~~ilrp~~i~g~~~  234 (269)
                         ..|+++++||||++..++.
T Consensus       162 ~~~~~gi~~~~v~pg~~~t~~~  183 (257)
T PRK09291        162 ELKPFGIQVATVNPGPYLTGFN  183 (257)
T ss_pred             HHHhcCcEEEEEecCcccccch
Confidence               3699999999999877643

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.82  E-value=9.8e-20  Score=154.74  Aligned_cols=156  Identities=17%  Similarity=0.153  Sum_probs=120.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .|++|+|+||||+|+||+++++.|+++|++|++++|++.+.....   .  ...+.++.+|+.|++++.++++       
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            356789999999999999999999999999999999865432221   1  1246788899999998877764       


Q ss_pred             CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      .+|+|||++|....           ...++.|+.+..++++++    .+.++++||++||...  ...+..+|+.+|.+.
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~  161 (246)
T PRK05653         82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGV  161 (246)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHH
Confidence            46999999984321           234567888888887777    4567789999998753  334556799999988


Q ss_pred             HHHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          211 EQFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       211 e~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+++       ..+++++++|||.++++...
T Consensus       162 ~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~  193 (246)
T PRK05653        162 IGFTKALALELASRGITVNAVAPGFIDTDMTE  193 (246)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence            76653       25899999999999988643

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=1.3e-19  Score=155.02  Aligned_cols=154  Identities=18%  Similarity=0.140  Sum_probs=117.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-eCCCCCCccc---ccc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      |.+++++||||+|+||+++++.|+++|++|+++ .|+.++..+.   ++.  .++.++.+|++|++++.++++       
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            456899999999999999999999999998774 6654432221   111  246788999999998887764       


Q ss_pred             CccEEEEcCCCCCCc-----------cchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~~~-----------~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++|+||||+|.....           ..+++|+.++..+++++.+    .+.++||++||...  +..+...|+.+|.++
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~  161 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAAL  161 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHH
Confidence            589999999843221           2355888888887777754    45679999999754  234557899999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+++.       .++++++++||++.++..
T Consensus       162 ~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~  192 (250)
T PRK08063        162 EALTRYLAVELAPKGIAVNAVSGGAVDTDAL  192 (250)
T ss_pred             HHHHHHHHHHHhHhCeEEEeEecCcccCchh
Confidence            988743       689999999999988754

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.82  E-value=9.6e-20  Score=156.29  Aligned_cols=132  Identities=23%  Similarity=0.302  Sum_probs=114.6

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCC---
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGR---  159 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~---  159 (269)
                      +|||||++|++|.+|++.|. .+++|+.++|..                +|++|++.+.+++.  ++|+|||+|+..   
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD   64 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRAE----------------LDITDPDAVLEVIRETRPDVVINAAAYTAVD   64 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------ccccChHHHHHHHHhhCCCEEEECccccccc
Confidence            49999999999999999998 779999999962                79999999999996  579999999842   


Q ss_pred             ----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-------------CCCCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          160 ----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------------DKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       160 ----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-------------~~~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                          +++..+.+|..++.++.++|.+.|. ++||+||-.+             ...|.+.||.+|...|..+++.+-++.
T Consensus        65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~~  143 (281)
T COG1091          65 KAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRHL  143 (281)
T ss_pred             cccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhCCCEE
Confidence                2345567999999999999999997 9999998643             134556799999999999999999999


Q ss_pred             EEEcCcccccCc
Q 024290          223 IIRLWPYWAICS  234 (269)
Q Consensus       223 ilrp~~i~g~~~  234 (269)
                      |+|.+|+||...
T Consensus       144 I~Rtswv~g~~g  155 (281)
T COG1091         144 ILRTSWVYGEYG  155 (281)
T ss_pred             EEEeeeeecCCC
Confidence            999999999854

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.82  E-value=2.3e-20  Score=163.50  Aligned_cols=133  Identities=24%  Similarity=0.330  Sum_probs=105.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCC--
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGR--  159 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~--  159 (269)
                      |||||||++|+||++|.+.|.++|++|+.+.|.                ..|++|.+.+.+.++  ++|+|||||+..  
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~   64 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNV   64 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------CS-TTSHHHHHHHHHHH--SEEEE------H
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------hcCCCCHHHHHHHHHHhCCCeEeccceeecH
Confidence            689999999999999999999999999999885                568999999998885  589999999853  


Q ss_pred             -----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-------------CCCCCCcHHHHHHHHHHHHHhcCCCE
Q 024290          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------------DKHPEVPLMEIKYCTEQFLQDSGLPH  221 (269)
Q Consensus       160 -----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-------------~~~~~~~y~~sK~~~e~~~~~~gi~~  221 (269)
                           +++..+.+|+.++.+|.++|.+.|. ++||+||..+             ...|.+.||.+|.+.|+.+++..-++
T Consensus        65 ~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~  143 (286)
T PF04321_consen   65 DACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAACPNA  143 (286)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-SSE
T ss_pred             HhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhcCCE
Confidence                 3455677999999999999999986 9999999643             22345679999999999999866699


Q ss_pred             EEEEcCcccccC
Q 024290          222 VIIRLWPYWAIC  233 (269)
Q Consensus       222 ~ilrp~~i~g~~  233 (269)
                      .|+|++++||+.
T Consensus       144 ~IlR~~~~~g~~  155 (286)
T PF04321_consen  144 LILRTSWVYGPS  155 (286)
T ss_dssp             EEEEE-SEESSS
T ss_pred             EEEecceecccC
Confidence            999999999983

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.82  E-value=8.7e-20  Score=155.45  Aligned_cols=155  Identities=16%  Similarity=0.160  Sum_probs=122.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc---CccEEEEcC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---GVHTVIDCA  156 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~---~~d~vi~~a  156 (269)
                      ++++++++||||+|+||+++++.|+++|++|++++|+.++..+.....+..++.+|++|.+++.++++   ++|+||||+
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~a   85 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCA   85 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECC
Confidence            46778999999999999999999999999999999986554443333467889999999988888775   589999999


Q ss_pred             CCCC-----------CccchhhcHHHHHHHHHHHHHc----C-CCeEEEecccCC--CCCCCCcHHHHHHHHHHHHHh--
Q 024290          157 TGRP-----------EEPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQD--  216 (269)
Q Consensus       157 g~~~-----------~~~~~~~n~~~~~~li~a~~~~----~-v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~~--  216 (269)
                      |...           ++..+.+|+.++.++++++.+.    + .++||++||...  +..+..+|+.+|.++|.+++.  
T Consensus        86 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~a  165 (245)
T PRK07060         86 GIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLC  165 (245)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHHH
Confidence            8532           2233458888988888877542    2 368999998753  344567899999999987642  


Q ss_pred             -----cCCCEEEEEcCcccccCc
Q 024290          217 -----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 -----~gi~~~ilrp~~i~g~~~  234 (269)
                           .+++++.++||+++++..
T Consensus       166 ~~~~~~~i~v~~v~pg~v~~~~~  188 (245)
T PRK07060        166 VELGPHGIRVNSVNPTVTLTPMA  188 (245)
T ss_pred             HHHhhhCeEEEEEeeCCCCCchh
Confidence                 589999999999998863

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.9e-19  Score=153.99  Aligned_cols=154  Identities=14%  Similarity=0.076  Sum_probs=120.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+...+...    ...+.++++|++|++++.++++       ++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999998654332221    1246889999999999887764       68


Q ss_pred             cEEEEcCCCCCC-----------ccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          150 HTVIDCATGRPE-----------EPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       150 d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      |+||||+|....           +..+.+|+.++.++.++    +++.+.++||++||...  +.....+|+.+|.+.+.
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~  162 (252)
T PRK06138         83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIAS  162 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHH
Confidence            999999994321           22356888887665554    45667789999999754  34456789999999988


Q ss_pred             HHHh-------cCCCEEEEEcCcccccCc
Q 024290          213 FLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.       .|+++++++||+++++..
T Consensus       163 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~  191 (252)
T PRK06138        163 LTRAMALDHATDGIRVNAVAPGTIDTPYF  191 (252)
T ss_pred             HHHHHHHHHHhcCeEEEEEEECCccCcch
Confidence            7643       489999999999988753

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.82  E-value=1.4e-19  Score=154.55  Aligned_cols=154  Identities=18%  Similarity=0.099  Sum_probs=120.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---ccc--CCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      +++|+|+||||+|+||+++++.|+++|++|++++|+.++..+.   +..  ..+.++.+|+.|.+++.++++       +
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5678999999999999999999999999999999985433221   111  237789999999998888774       6


Q ss_pred             ccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC---CCCCCcHHHHHHHH
Q 024290          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD---KHPEVPLMEIKYCT  210 (269)
Q Consensus       149 ~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~---~~~~~~y~~sK~~~  210 (269)
                      +|+||||++....           +..++.|+.++.++++++    ++.+.++||++||....   .....+|+.+|.++
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~  163 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGL  163 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHH
Confidence            8999999984321           234567888888888776    45567899999987643   34456799999998


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+++.       .+++++++|||+++++..
T Consensus       164 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~  194 (251)
T PRK12826        164 VGFTRALALELAARNITVNSVHPGGVDTPMA  194 (251)
T ss_pred             HHHHHHHHHHHHHcCeEEEEEeeCCCCcchh
Confidence            877643       589999999999999854

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.3e-19  Score=154.96  Aligned_cols=153  Identities=16%  Similarity=0.089  Sum_probs=119.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---ccc--CCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+...+.   +..  .++.++.+|++|.+++.++++       +
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5678999999999999999999999999999999975433221   111  146778999999988877653       6


Q ss_pred             ccEEEEcCCCCC--------------CccchhhcHHHHHHHHHHHHHc----CCCeEEEecccCCCCCCCCcHHHHHHHH
Q 024290          149 VHTVIDCATGRP--------------EEPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCDKHPEVPLMEIKYCT  210 (269)
Q Consensus       149 ~d~vi~~ag~~~--------------~~~~~~~n~~~~~~li~a~~~~----~v~r~V~~SS~~~~~~~~~~y~~sK~~~  210 (269)
                      +|+||||+|...              ++..+++|+.++.++++++.+.    +.++||++||... ..+..+|+.+|.++
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~Y~~sK~a~  162 (250)
T PRK07774         84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA-WLYSNFYGLAKVGL  162 (250)
T ss_pred             CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc-cCCccccHHHHHHH
Confidence            899999999521              1234568999999888887643    4579999999765 34567899999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      |.+++.       .++++++++||.+.++..
T Consensus       163 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~  193 (250)
T PRK07774        163 NGLTQQLARELGGMNIRVNAIAPGPIDTEAT  193 (250)
T ss_pred             HHHHHHHHHHhCccCeEEEEEecCcccCccc
Confidence            987643       479999999999987754

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.5e-19  Score=153.08  Aligned_cols=153  Identities=20%  Similarity=0.260  Sum_probs=118.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc----cc--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LR--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      |++|+++||||+|+||+++++.|+++|++|++++|+.+...+.    ++  ..++.++++|++|++++.++++       
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            5678999999999999999999999999999999975422111    11  1246788999999998877764       


Q ss_pred             CccEEEEcCCCC-----CCccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC------C-CCCCcHHHHHHHHHHH
Q 024290          148 GVHTVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD------K-HPEVPLMEIKYCTEQF  213 (269)
Q Consensus       148 ~~d~vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~------~-~~~~~y~~sK~~~e~~  213 (269)
                      ++|+||||++..     .+...+++|+.++.++++++.+.  ..++||++||....      . ....+|+.+|.++|.+
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~  163 (248)
T PRK07806         84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDA  163 (248)
T ss_pred             CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHHHH
Confidence            589999999842     23456779999999999999864  23589999985431      1 1235799999999988


Q ss_pred             HHh-------cCCCEEEEEcCcccccC
Q 024290          214 LQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       214 ~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      ++.       .++++++++|+.+.++.
T Consensus       164 ~~~l~~~~~~~~i~v~~v~pg~~~~~~  190 (248)
T PRK07806        164 LRALRPELAEKGIGFVVVSGDMIEGTV  190 (248)
T ss_pred             HHHHHHHhhccCeEEEEeCCccccCch
Confidence            754       68999999999887764

>PRK06398 aldose dehydrogenase; Validated

Probab=99.81  E-value=3e-19  Score=154.03  Aligned_cols=149  Identities=12%  Similarity=0.102  Sum_probs=119.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.+..      ..+.++.+|++|++++.++++       ++|+|
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~l   76 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDIL   76 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46789999999999999999999999999999999975432      157789999999998877763       68999


Q ss_pred             EEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 024290          153 IDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       153 i~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~  215 (269)
                      |||||...           ++..+++|+.++..+++++.    +.+.++||++||....  ......|+.+|.+++.+.+
T Consensus        77 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~  156 (258)
T PRK06398         77 VNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTR  156 (258)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHH
Confidence            99998422           22346789999888777664    3456799999997653  3456789999999998875


Q ss_pred             h------cCCCEEEEEcCcccccCc
Q 024290          216 D------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ~------~gi~~~ilrp~~i~g~~~  234 (269)
                      .      .+++++.|+||++.+++.
T Consensus       157 ~la~e~~~~i~vn~i~PG~v~T~~~  181 (258)
T PRK06398        157 SIAVDYAPTIRCVAVCPGSIRTPLL  181 (258)
T ss_pred             HHHHHhCCCCEEEEEecCCccchHH
Confidence            3      248999999999987643

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.81  E-value=9.6e-20  Score=155.65  Aligned_cols=153  Identities=16%  Similarity=0.215  Sum_probs=119.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cc--cCCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~--~~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      +++++++||||+|+||++++++|+++|++|++++|+.+...+.   +.  ..++.++.+|++|.++++++++       +
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999999999999999999976543221   11  1257889999999998888764       5


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      +|+||||+|...           ++..+++|+.++.++++++.    +.+.++||++||...  .......|+.+|.+++
T Consensus        81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~  160 (250)
T TIGR03206        81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLV  160 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHH
Confidence            899999998421           12346688999888777664    566789999999764  3344568999999888


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccC
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .+++.       .++++++++||.+++++
T Consensus       161 ~~~~~la~~~~~~~i~v~~v~pg~~~~~~  189 (250)
T TIGR03206       161 AFSKTMAREHARHGITVNVVCPGPTDTAL  189 (250)
T ss_pred             HHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence            76642       48999999999999875

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3e-19  Score=155.11  Aligned_cols=155  Identities=15%  Similarity=0.114  Sum_probs=119.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHhc-----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      .|++|+++||||+|+||+++++.|+++|++|++++|+.++..+...       ..++.++.+|++|++++.++++     
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3667999999999999999999999999999999997544322111       1246788999999998887764     


Q ss_pred             --CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCCC--CCCCCcHHHHH
Q 024290          148 --GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIK  207 (269)
Q Consensus       148 --~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~~--~~~~~~y~~sK  207 (269)
                        ++|+||||+|...            +...+++|+.+..++++++.+    .+.++||++||....  ..+..+|+.+|
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  163 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTK  163 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHH
Confidence              6899999998421            123456788888888776643    344689999997653  23457899999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .++|.+++.       .++++++++||.+.+++.
T Consensus       164 ~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~  197 (276)
T PRK05875        164 SAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLV  197 (276)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCccCCccc
Confidence            999988753       579999999999987654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.81  E-value=8.2e-20  Score=157.08  Aligned_cols=154  Identities=16%  Similarity=0.112  Sum_probs=121.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------CccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d~  151 (269)
                      +++++++||||+|+||+++++.|+++|++|++++|+.+...+...+  ..+.++.+|++|.+++.++++       ++|+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5678999999999999999999999999999999986544332222  247788999999998887764       5899


Q ss_pred             EEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc----C-CCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       152 vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~----~-v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      +|||+|...           ++..+++|+.++.++++++...    + .++||++||...  +..+...|+.+|.+++.+
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  163 (257)
T PRK07067         84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISY  163 (257)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHH
Confidence            999998421           2234668999999999888543    1 258999998643  345667899999998887


Q ss_pred             HH-------hcCCCEEEEEcCcccccCc
Q 024290          214 LQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      .+       ..|+++++++||+++++..
T Consensus       164 ~~~la~e~~~~gi~v~~i~pg~v~t~~~  191 (257)
T PRK07067        164 TQSAALALIRHGINVNAIAPGVVDTPMW  191 (257)
T ss_pred             HHHHHHHhcccCeEEEEEeeCcccchhh
Confidence            64       3689999999999999753

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.1e-19  Score=154.42  Aligned_cols=154  Identities=16%  Similarity=0.118  Sum_probs=120.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHh-------cC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATL-------VG  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~-------~~  148 (269)
                      +++|+++||||+|+||++++++|+++|++|++++|+++...+...     ...+.++.+|++|.+++.+++       .+
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999997654332211     124688999999998887766       36


Q ss_pred             ccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          149 VHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       149 ~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      +|+||||+|...            ++..+++|+.++..+++++.+.   ..++||++||...  +..+...|+.+|.+++
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~  162 (258)
T PRK07890         83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALL  162 (258)
T ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHHH
Confidence            899999998421            1234568889999888888642   2358999999764  2344568999999998


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccCc
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.       .++++++++||+++++..
T Consensus       163 ~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~  192 (258)
T PRK07890        163 AASQSLATELGPQGIRVNSVAPGYIWGDPL  192 (258)
T ss_pred             HHHHHHHHHHhhcCcEEEEEeCCccCcHHH
Confidence            87653       589999999999999753

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4.9e-19  Score=155.58  Aligned_cols=156  Identities=15%  Similarity=0.094  Sum_probs=119.7

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c--CCCEEEEcCCCCCCcHHHHhc------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D--WGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      ..+.+|+++||||+|+||+++++.|+++|++|++++|+.+...+..+   .  ..+.++++|++|.+++.++++      
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999999999998654332211   1  236788999999998888775      


Q ss_pred             -CccEEEEcCCCCCC-------------ccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC---CCCCCcHHHH
Q 024290          148 -GVHTVIDCATGRPE-------------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD---KHPEVPLMEI  206 (269)
Q Consensus       148 -~~d~vi~~ag~~~~-------------~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~---~~~~~~y~~s  206 (269)
                       ++|+||||||....             +..+++|+.+...+++++    ++.+.++||++||.+..   ......|+.+
T Consensus       116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~as  195 (293)
T PRK05866        116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNAS  195 (293)
T ss_pred             CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHH
Confidence             78999999984321             124567888877766654    46677899999997542   2334679999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      |++++.+++.       .|+++++++||.+-+++.
T Consensus       196 Kaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~  230 (293)
T PRK05866        196 KAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMI  230 (293)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccc
Confidence            9999877543       589999999998877643

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.81  E-value=7.1e-19  Score=149.97  Aligned_cols=154  Identities=17%  Similarity=0.102  Sum_probs=119.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc-------cc--cCCCEEEEcCCCCCCcHHHHh-----
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF-------LR--DWGATVVNADLSKPETIPATL-----  146 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~--~~~~~~i~~Dl~d~~~l~~~~-----  146 (269)
                      +++|+++||||+|+||+++++.|+++|++|++++|......+.       +.  ...+.++.+|+.|.+++.+++     
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999987743221111       11  124678999999999888776     


Q ss_pred             --cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH-----HcCCCeEEEecccCC--CCCCCCcHHHH
Q 024290          147 --VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK-----AMGIQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       147 --~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~-----~~~v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                        .++|+||||+|...           +...+++|+.++.++++++.     +.+.++||++||...  +..+...|+.+
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s  163 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAAS  163 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHH
Confidence              35899999999532           12345688999999998887     456679999999764  34556789999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      |.+.+.+++.       .++++++++||++.++..
T Consensus       164 K~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~  198 (249)
T PRK12827        164 KAGLIGLTKTLANELAPRGITVNAVAPGAINTPMA  198 (249)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcc
Confidence            9988876542       589999999999998754

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.81  E-value=1.3e-19  Score=155.65  Aligned_cols=155  Identities=10%  Similarity=0.059  Sum_probs=120.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+.+|++|||||+|+||++++++|+++|++|++++|+.++..+..   ..  ..+..+.+|++|++++.++++       
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999865433221   11  245678899999998887763       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++|+||||+|...           ++..+++|+.++..+++++.+    .+.++||++||...  +.....+|+.+|.++
T Consensus        86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  165 (254)
T PRK08085         86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAV  165 (254)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHH
Confidence            5899999998422           223567888888777776643    45679999998753  344567899999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+++.       .|+++++|+||++.++..
T Consensus       166 ~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~  196 (254)
T PRK08085        166 KMLTRGMCVELARHNIQVNGIAPGYFKTEMT  196 (254)
T ss_pred             HHHHHHHHHHHHhhCeEEEEEEeCCCCCcch
Confidence            987753       589999999999998754

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.5e-19  Score=154.68  Aligned_cols=154  Identities=14%  Similarity=0.113  Sum_probs=120.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...+  ..+.++++|++|.+++.++++       .+|
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   82 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVD   82 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            36779999999999999999999999999999999986544333222  247789999999998877763       579


Q ss_pred             EEEEcCCCCC----------CccchhhcHHHHHHHHHHHHH---cCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH
Q 024290          151 TVIDCATGRP----------EEPIKKVDWEGKVALIQCAKA---MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       151 ~vi~~ag~~~----------~~~~~~~n~~~~~~li~a~~~---~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~  215 (269)
                      ++|||+|...          ++..+++|+.++..+++++..   .+.++||++||...  .......|+.+|.+++.+.+
T Consensus        83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~  162 (261)
T PRK08265         83 ILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTR  162 (261)
T ss_pred             EEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHH
Confidence            9999998421          123456788888887777643   33468999998754  23345679999999988765


Q ss_pred             h-------cCCCEEEEEcCcccccC
Q 024290          216 D-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .       .|+++++|+||++.+++
T Consensus       163 ~la~e~~~~gi~vn~v~PG~~~t~~  187 (261)
T PRK08265        163 SMAMDLAPDGIRVNSVSPGWTWSRV  187 (261)
T ss_pred             HHHHHhcccCEEEEEEccCCccChh
Confidence            3       58999999999988765

>PRK08264 short chain dehydrogenase; Validated

Probab=99.81  E-value=4.4e-19  Score=150.66  Aligned_cols=152  Identities=18%  Similarity=0.126  Sum_probs=120.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc---CccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---GVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~---~~d~vi~~  155 (269)
                      .+.+++++||||+|+||+++++.|+++|+ +|++++|+.++..+  ...++.++.+|+.|.+++.++++   .+|+|||+
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   80 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN   80 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            35678999999999999999999999998 99999998665433  22368889999999999888775   58999999


Q ss_pred             CCC-CCC-----------ccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh-
Q 024290          156 ATG-RPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD-  216 (269)
Q Consensus       156 ag~-~~~-----------~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~-  216 (269)
                      +|. ...           ...+++|+.+..++++++.    +.+.++||++||....  ..+..+|+.+|.+++.+.+. 
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l  160 (238)
T PRK08264         81 AGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQAL  160 (238)
T ss_pred             CCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHH
Confidence            996 221           2235578888888888764    4567789999987542  34556799999999877643 


Q ss_pred             ------cCCCEEEEEcCcccccC
Q 024290          217 ------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       217 ------~gi~~~ilrp~~i~g~~  233 (269)
                            .+++++++|||.+.++.
T Consensus       161 ~~~~~~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        161 RAELAPQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             HHHhhhcCeEEEEEeCCcccccc
Confidence                  58999999999998775

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=3e-19  Score=151.89  Aligned_cols=154  Identities=15%  Similarity=0.122  Sum_probs=119.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cc--cCCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~--~~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      +++++++||||+|+||.+++++|+++|++|++++|+++...+.   +.  ..++.++.+|+++++++.++++       +
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5678999999999999999999999999999999976443221   11  1247788999999998888774       6


Q ss_pred             ccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       149 ~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      +|+||||+|....           +..+++|+.++.++++++.    +.+.+++|++||...  +..+...|+.+|.+++
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~  164 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVL  164 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHH
Confidence            8999999984321           2346788888888777764    456679999998754  3344567999999888


Q ss_pred             HHHH-------hcCCCEEEEEcCcccccCc
Q 024290          212 QFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++       ..|+++++++||.+.+++.
T Consensus       165 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~  194 (239)
T PRK07666        165 GLTESLMQEVRKHNIRVTALTPSTVATDMA  194 (239)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCcccCcch
Confidence            7753       3689999999999988754

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.81  E-value=1.7e-19  Score=154.52  Aligned_cols=151  Identities=15%  Similarity=0.080  Sum_probs=115.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      +|++|||||+|+||+++++.|+++|++|++++|+.+...+...     ..++.++.+|+.|.+++.+++       .++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4689999999999999999999999999999997654322211     124778999999998665544       5689


Q ss_pred             EEEEcCCCCCC-----------ccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      +|||+++....           +..+..|+.++..+++++    ++.++++||++||...  +......|+.+|.+++.+
T Consensus        81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~  160 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGL  160 (255)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHH
Confidence            99999984221           123457888877776665    5667889999998653  233456799999998877


Q ss_pred             HHh-------cCCCEEEEEcCcccccC
Q 024290          214 LQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       214 ~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      ++.       .+++++++||++++++.
T Consensus       161 ~~~~~~~~~~~~i~v~~i~pg~v~~~~  187 (255)
T TIGR01963       161 TKVLALEVAAHGITVNAICPGYVRTPL  187 (255)
T ss_pred             HHHHHHHhhhcCeEEEEEecCccccHH
Confidence            642       48999999999999885

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4e-19  Score=150.49  Aligned_cols=154  Identities=13%  Similarity=0.063  Sum_probs=120.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cccCCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDWGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|++++..+.   +...+++++.+|+.|.+++.++++       ++
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence            36678999999999999999999999999999999976543222   223467888999999988877764       68


Q ss_pred             cEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHHH
Q 024290          150 HTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       150 d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~  212 (269)
                      |+|||++|....           ...+++|+.++.++++++.    +.+.++||++||....  ..+..+|+.+|.+.+.
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~  163 (239)
T PRK12828         84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVAR  163 (239)
T ss_pred             CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHH
Confidence            999999984321           2235578888888877764    4578899999997643  3345679999998877


Q ss_pred             HHH-------hcCCCEEEEEcCcccccC
Q 024290          213 FLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       213 ~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +++       ..+++++++|||+++++.
T Consensus       164 ~~~~~a~~~~~~~i~~~~i~pg~v~~~~  191 (239)
T PRK12828        164 LTEALAAELLDRGITVNAVLPSIIDTPP  191 (239)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence            663       358999999999999874

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.9e-19  Score=151.55  Aligned_cols=153  Identities=15%  Similarity=0.074  Sum_probs=120.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-cCCCEEEEcCCCCCCcHHHHhcC----ccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPATLVG----VHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~~~~~i~~Dl~d~~~l~~~~~~----~d~vi~~ag  157 (269)
                      +++++||||+|+||++++++|+++|++|++++|+++...+... ..++.++.+|++|.+++.++++.    +|.+|||+|
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag   80 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG   80 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence            4689999999999999999999999999999997654333222 12578899999999999888754    589999998


Q ss_pred             CCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH-------
Q 024290          158 GRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ-------  215 (269)
Q Consensus       158 ~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~-------  215 (269)
                      ...           ++..+++|+.++.++++++...  +.+++|++||...  +.....+|+.+|.+++.+.+       
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~  160 (240)
T PRK06101         81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLR  160 (240)
T ss_pred             ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHH
Confidence            321           1235779999999999988753  2358999988653  23345679999999998764       


Q ss_pred             hcCCCEEEEEcCcccccCcc
Q 024290          216 DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       216 ~~gi~~~ilrp~~i~g~~~~  235 (269)
                      ..|+++++++||++++++..
T Consensus       161 ~~gi~v~~v~pg~i~t~~~~  180 (240)
T PRK06101        161 PKGIEVVTVFPGFVATPLTD  180 (240)
T ss_pred             hcCceEEEEeCCcCCCCCcC
Confidence            46899999999999987543

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.3e-19  Score=154.29  Aligned_cols=153  Identities=12%  Similarity=0.078  Sum_probs=120.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +|++++++||||+|+||++++++|+++|++|++++|+++.. +...     ..++.++.+|+++++++.++++       
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFG   82 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            57789999999999999999999999999999999986543 2111     1257889999999998887774       


Q ss_pred             CccEEEEcCCCCC----------CccchhhcHHHHHHHHHHHHH---cCCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          148 GVHTVIDCATGRP----------EEPIKKVDWEGKVALIQCAKA---MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       148 ~~d~vi~~ag~~~----------~~~~~~~n~~~~~~li~a~~~---~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      ++|+||||+|...          ++..+++|+.+..++.+++.+   .+.++||++||...  +..+...|+.+|.+++.
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~  162 (258)
T PRK08628         83 RIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLA  162 (258)
T ss_pred             CCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHHHHHH
Confidence            5899999999422          123456788888888777643   23468999998754  23456789999999998


Q ss_pred             HHHh-------cCCCEEEEEcCcccccC
Q 024290          213 FLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       213 ~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +++.       .+++++.|+||++++++
T Consensus       163 ~~~~l~~e~~~~~i~v~~v~pg~v~t~~  190 (258)
T PRK08628        163 LTREWAVALAKDGVRVNAVIPAEVMTPL  190 (258)
T ss_pred             HHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence            7753       58999999999999985

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.81  E-value=2.4e-19  Score=159.49  Aligned_cols=152  Identities=12%  Similarity=0.102  Sum_probs=113.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+.+|+++||||+|+||.++++.|+++|++|++++|+.++..+...     ...+.++.+|++|.+++.++++       
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            3567899999999999999999999999999999997654332221     1247788999999998887764       


Q ss_pred             CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHH----cC--CCeEEEecccCCC-------------
Q 024290          148 GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKA----MG--IQKYVFYSIHNCD-------------  196 (269)
Q Consensus       148 ~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~----~~--v~r~V~~SS~~~~-------------  196 (269)
                      ++|+||||||...            ++..+++|+.++.++++++..    .+  .+|||++||....             
T Consensus        83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~  162 (322)
T PRK07453         83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP  162 (322)
T ss_pred             CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence            4899999999421            134467899998888777653    33  3599999985321             


Q ss_pred             ------------------------CCCCCcHHHHHHHHHHHH----Hh----cCCCEEEEEcCcccc
Q 024290          197 ------------------------KHPEVPLMEIKYCTEQFL----QD----SGLPHVIIRLWPYWA  231 (269)
Q Consensus       197 ------------------------~~~~~~y~~sK~~~e~~~----~~----~gi~~~ilrp~~i~g  231 (269)
                                              ..+..+|+.+|.+.+.+.    ++    .|+++++++||++++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  229 (322)
T PRK07453        163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVAD  229 (322)
T ss_pred             cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence                                    012356999998876543    32    479999999999974

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.3e-19  Score=157.75  Aligned_cols=155  Identities=14%  Similarity=0.024  Sum_probs=119.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---ccC--CCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RDW--GATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~--~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.+...+..   ...  .+.++.+|++|.+++.++++       
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            367899999999999999999999999999999999865443322   112  36778999999998887763       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcC-CCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~-v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      ++|+||||||...           ++..+++|+.++.++++++.    +.+ .++||++||...  +..+...|+.+|.+
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  162 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYG  162 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHH
Confidence            5799999999421           22345789999888888764    344 468999998754  34455779999998


Q ss_pred             HHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+       ..|+++++++||.+.+++.
T Consensus       163 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  194 (275)
T PRK05876        163 VVGLAETLAREVTADGIGVSVLCPMVVETNLV  194 (275)
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEeCccccccc
Confidence            665432       3689999999999988753

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.3e-19  Score=154.54  Aligned_cols=154  Identities=15%  Similarity=0.022  Sum_probs=119.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c----cCCCEEEEcCCCCCCcHHHHhc-----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R----DWGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~----~~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      .+.+|+++||||+|+||+++++.|+++|++|++++|+.++..+..   .    ...+.++++|++|++++.++++     
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999765433221   1    1246788999999998887764     


Q ss_pred             --CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHH
Q 024290          148 --GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (269)
Q Consensus       148 --~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~  208 (269)
                        ++|++|||+|...           ++..+++|+.++..+++++.    +.+.++||++||...  ......+|+.+|.
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  163 (260)
T PRK07063         84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKH  163 (260)
T ss_pred             hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHH
Confidence              6899999999422           22345688888887777764    345579999999754  2334567999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +++.+.+.       .|++++.|+||.+-++.
T Consensus       164 a~~~~~~~la~el~~~gIrvn~v~PG~v~t~~  195 (260)
T PRK07063        164 GLLGLTRALGIEYAARNVRVNAIAPGYIETQL  195 (260)
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEeeCCccChh
Confidence            99987753       58999999999997765

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.6e-19  Score=155.52  Aligned_cols=152  Identities=14%  Similarity=0.076  Sum_probs=118.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---cCCCEEEEcCCCCCCcHHHHhc--------CccE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---DWGATVVNADLSKPETIPATLV--------GVHT  151 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~~~~~~i~~Dl~d~~~l~~~~~--------~~d~  151 (269)
                      ||+++||||+|+||++++++|+++|++|++++|+.+...+...   ...+.++++|++|.+++.++++        ++|+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            4789999999999999999999999999999998665433222   2357899999999988877653        5699


Q ss_pred             EEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 024290          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       152 vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~  214 (269)
                      ||||+|...           .+..+++|+.++.++++++.    +.+.++||++||...  +......|+.+|.+++.+.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~  160 (260)
T PRK08267         81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLT  160 (260)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHH
Confidence            999999432           23356688998888877764    445679999998754  2344567999999988766


Q ss_pred             Hh-------cCCCEEEEEcCcccccCc
Q 024290          215 QD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       215 ~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.       .++++++++||.+.+.+.
T Consensus       161 ~~l~~~~~~~~i~v~~i~pg~~~t~~~  187 (260)
T PRK08267        161 EALDLEWRRHGIRVADVMPLFVDTAML  187 (260)
T ss_pred             HHHHHHhcccCcEEEEEecCCcCCccc
Confidence            43       589999999999987643

>PRK06194 hypothetical protein; Provisional

Probab=99.80  E-value=5.8e-19  Score=154.19  Aligned_cols=154  Identities=12%  Similarity=-0.016  Sum_probs=117.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c--CCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D--WGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      +.++++|||||+|+||++++++|+++|++|++++|+.+...+...   .  .++.++.+|++|.+++.++++       +
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999997554332211   1  246679999999999888774       5


Q ss_pred             ccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHH----HHHcCC------CeEEEecccCCC--CCCCCcHHH
Q 024290          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQC----AKAMGI------QKYVFYSIHNCD--KHPEVPLME  205 (269)
Q Consensus       149 ~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a----~~~~~v------~r~V~~SS~~~~--~~~~~~y~~  205 (269)
                      +|+||||||....           +..+++|+.++.+++++    +.+.+.      +++|++||....  .....+|+.
T Consensus        84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  163 (287)
T PRK06194         84 VHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNV  163 (287)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHH
Confidence            7999999995321           23466899988887766    455443      589999997642  344567999


Q ss_pred             HHHHHHHHHHh---------cCCCEEEEEcCcccccCc
Q 024290          206 IKYCTEQFLQD---------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       206 sK~~~e~~~~~---------~gi~~~ilrp~~i~g~~~  234 (269)
                      +|.+++.+++.         .+++++.+.||.+.+++.
T Consensus       164 sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~  201 (287)
T PRK06194        164 SKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIW  201 (287)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccc
Confidence            99999887642         357888999998877654

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.80  E-value=4.8e-19  Score=151.97  Aligned_cols=151  Identities=19%  Similarity=0.169  Sum_probs=119.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.+..   ....++.++++|+.|++++.++++       ++|+|
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET---VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh---hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46789999999999999999999999999999999976431   122357889999999988887764       56999


Q ss_pred             EEcCCCCC-----------CccchhhcHHHHHHHHHHHHH-----cCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 024290          153 IDCATGRP-----------EEPIKKVDWEGKVALIQCAKA-----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       153 i~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~-----~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~  214 (269)
                      |||+|...           ++..+++|+.++..+++++..     .+.++||++||....  ......|+.+|.+++.++
T Consensus        80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~  159 (252)
T PRK07856         80 VNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLT  159 (252)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHH
Confidence            99998422           124567899999998887753     234689999997653  344578999999999887


Q ss_pred             Hh------cCCCEEEEEcCcccccC
Q 024290          215 QD------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       215 ~~------~gi~~~ilrp~~i~g~~  233 (269)
                      +.      ..++++.++||.+.++.
T Consensus       160 ~~la~e~~~~i~v~~i~Pg~v~t~~  184 (252)
T PRK07856        160 RSLAVEWAPKVRVNAVVVGLVRTEQ  184 (252)
T ss_pred             HHHHHHhcCCeEEEEEEeccccChH
Confidence            53      23899999999998774

>PRK09135 pteridine reductase; Provisional

Probab=99.80  E-value=7.3e-19  Score=149.89  Aligned_cols=154  Identities=16%  Similarity=0.119  Sum_probs=118.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc----cc---cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LR---DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~~---~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      +++++|+||||+|+||++++++|+++|++|++++|+.+...+.    +.   ...+.++.+|++|.+++.++++      
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999864322111    11   1247789999999998887764      


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                       ++|+||||+|...           ++..+++|+.++.++++++.+.   ..+.++++++...  +..+..+|+.+|.++
T Consensus        84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~  163 (249)
T PRK09135         84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAAL  163 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHHHH
Confidence             5799999998421           1335668999999999998642   2246777766432  345667899999999


Q ss_pred             HHHHHh------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~------~gi~~~ilrp~~i~g~~~  234 (269)
                      |.+++.      .+++++++|||+++++..
T Consensus       164 ~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~  193 (249)
T PRK09135        164 EMLTRSLALELAPEVRVNAVAPGAILWPED  193 (249)
T ss_pred             HHHHHHHHHHHCCCCeEEEEEeccccCccc
Confidence            988753      369999999999999864

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.80  E-value=5.5e-19  Score=155.27  Aligned_cols=151  Identities=23%  Similarity=0.268  Sum_probs=121.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCC------Ccccc---------ccCCCEEEEcCCCCC------Cc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPA------PADFL---------RDWGATVVNADLSKP------ET  141 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~------~~~~~---------~~~~~~~i~~Dl~d~------~~  141 (269)
                      ++|++||||||+|.+++.+|+.+- .+|++++|-.+.      ..+.+         ...+++++.+|+.++      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999875 599999996542      11111         123689999999854      34


Q ss_pred             HHHHhcCccEEEEcCC----CCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC---------------------
Q 024290          142 IPATLVGVHTVIDCAT----GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD---------------------  196 (269)
Q Consensus       142 l~~~~~~~d~vi~~ag----~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~---------------------  196 (269)
                      ..++.+.+|.||||++    ..+...+...|+.|+..+++.|...+.|.+.|+||+++.                     
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~  160 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNV  160 (382)
T ss_pred             HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccc
Confidence            5666678999999998    355677888999999999999998888889999998641                     


Q ss_pred             -CCCCCcHHHHHHHHHHHHHh---cCCCEEEEEcCcccccCc
Q 024290          197 -KHPEVPLMEIKYCTEQFLQD---SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       197 -~~~~~~y~~sK~~~e~~~~~---~gi~~~ilrp~~i~g~~~  234 (269)
                       .....+|+.||+..|.++++   .|++++|+|||++.|+..
T Consensus       161 ~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         161 GQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             cCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCc
Confidence             11236799999999999975   689999999999998754

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.80  E-value=4.7e-19  Score=151.95  Aligned_cols=154  Identities=17%  Similarity=0.131  Sum_probs=117.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-eCCCCCCcccc---c--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADFL---R--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +++++++||||+|+||+++++.|+++|++|+++ .|+.++..+..   .  ...+.++.+|++|++++.++++       
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            567899999999999999999999999999875 56543322111   1  1246788999999999887764       


Q ss_pred             ------CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHH
Q 024290          148 ------GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       148 ------~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                            ++|+||||+|....           +..+++|+.++.++++++.+.  ..++||++||...  +..+...|+.+
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~~s  163 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLS  163 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchHhh
Confidence                  58999999984221           233458999999998888653  3458999998754  34456679999


Q ss_pred             HHHHHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          207 KYCTEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       207 K~~~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      |.+++.+.+       ..++++++++||+++++..
T Consensus       164 K~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~  198 (254)
T PRK12746        164 KGALNTMTLPLAKHLGERGITVNTIMPGYTKTDIN  198 (254)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcch
Confidence            999987653       2689999999999988754

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3.8e-19  Score=154.47  Aligned_cols=152  Identities=13%  Similarity=0.076  Sum_probs=118.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-------cCccEEEEc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-------VGVHTVIDC  155 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-------~~~d~vi~~  155 (269)
                      ||+++||||+|+||+++++.|+++|++|++++|+.++..+ +...++.++.+|++|.+++.+++       .++|+||||
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~   79 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINN   79 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            4789999999999999999999999999999997654333 22346788999999998887766       368999999


Q ss_pred             CCCCC-----------CccchhhcHHHHHHHHHHHHH---cCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH----
Q 024290          156 ATGRP-----------EEPIKKVDWEGKVALIQCAKA---MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ----  215 (269)
Q Consensus       156 ag~~~-----------~~~~~~~n~~~~~~li~a~~~---~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~----  215 (269)
                      +|...           ++..+++|+.++.++++++..   .+.+++|++||...  ......+|+.+|.+++.+.+    
T Consensus        80 ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~  159 (274)
T PRK05693         80 AGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRL  159 (274)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            99422           123456888898888887643   24468999998754  23345789999999887653    


Q ss_pred             ---hcCCCEEEEEcCcccccCcc
Q 024290          216 ---DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       216 ---~~gi~~~ilrp~~i~g~~~~  235 (269)
                         ..|+++++++||.+.+++..
T Consensus       160 e~~~~gi~v~~v~pg~v~t~~~~  182 (274)
T PRK05693        160 ELAPFGVQVMEVQPGAIASQFAS  182 (274)
T ss_pred             HhhhhCeEEEEEecCcccccccc
Confidence               36899999999999887543

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.80  E-value=4.9e-19  Score=152.47  Aligned_cols=155  Identities=19%  Similarity=0.190  Sum_probs=119.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---cCCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---DWGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      .+++++++||||+|+||++++++|+++|++|++++|+.+...+...   ...+.++.+|++|++++.++++       ++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            3677999999999999999999999999999999997654332211   1245889999999998877663       68


Q ss_pred             cEEEEcCCCC-C-----------CccchhhcHHHHHHHHHHH----HHcCC-CeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          150 HTVIDCATGR-P-----------EEPIKKVDWEGKVALIQCA----KAMGI-QKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       150 d~vi~~ag~~-~-----------~~~~~~~n~~~~~~li~a~----~~~~v-~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      |+|||++|.. .           +...+++|+.++.++++++    ++.+. ++|+++||...  .......|+.+|.+.
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~  167 (264)
T PRK12829         88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAV  167 (264)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHH
Confidence            9999999954 1           1344668888988887776    34445 57888887653  234456799999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      |.+++.       .+++++++|||+++++..
T Consensus       168 ~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~  198 (264)
T PRK12829        168 VGLVKSLAIELGPLGIRVNAILPGIVRGPRM  198 (264)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence            887643       589999999999998764

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.80  E-value=8.7e-19  Score=150.80  Aligned_cols=153  Identities=18%  Similarity=0.228  Sum_probs=116.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCC-Cccc---ccc---CCCEEEEcCCCCCCcHHHHhc------
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPA-PADF---LRD---WGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~-~~~~---~~~---~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+||||+|+||++++++|+++| ++|++++|+++. ..+.   +..   .+++++.+|++|.+++.++++      
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            35789999999999999999999995 999999998764 2221   111   257889999999988665542      


Q ss_pred             CccEEEEcCCCCCC-----c------cchhhcHHHHHH----HHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRPE-----E------PIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~~-----~------~~~~~n~~~~~~----li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++|++|||+|....     .      ..+++|+.++..    +++.+++.+.++||++||...  .......|+.+|.++
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~  166 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGL  166 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHH
Confidence            69999999985311     1      136788877665    667777777889999999764  223446799999988


Q ss_pred             HHHH-------HhcCCCEEEEEcCcccccCc
Q 024290          211 EQFL-------QDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~-------~~~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.       +..++++++++||++.+++.
T Consensus       167 ~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~  197 (253)
T PRK07904        167 DGFYLGLGEALREYGVRVLVVRPGQVRTRMS  197 (253)
T ss_pred             HHHHHHHHHHHhhcCCEEEEEeeCceecchh
Confidence            7553       34799999999999988753

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.80  E-value=4.7e-19  Score=152.11  Aligned_cols=155  Identities=13%  Similarity=0.031  Sum_probs=118.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+++||||+|+||.++++.|+++|++|++++|++++..+...   .  ..+.++.+|++|++++.++++       
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            3567899999999999999999999999999999998654433221   1  246788999999998887764       


Q ss_pred             CccEEEEcCCCCC------------CccchhhcHHHHHHHHH----HHHHcCCCeEEEecccCC---CCCCCCcHHHHHH
Q 024290          148 GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNC---DKHPEVPLMEIKY  208 (269)
Q Consensus       148 ~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~----a~~~~~v~r~V~~SS~~~---~~~~~~~y~~sK~  208 (269)
                      ++|+||||||...            ++..+++|+.+...+++    .+++.+.++||++||...   .......|+.+|.
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  162 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKA  162 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHH
Confidence            6899999998521            13346688877666544    445566679999998753   2344568999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+.       .|+++++|+||++.+++.
T Consensus       163 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  195 (254)
T PRK07478        163 GLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMG  195 (254)
T ss_pred             HHHHHHHHHHHHHhhcCEEEEEEeeCcccCccc
Confidence            99877642       589999999999987743

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.80  E-value=6.8e-19  Score=150.72  Aligned_cols=149  Identities=15%  Similarity=0.101  Sum_probs=115.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------CccEEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVHTVID  154 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d~vi~  154 (269)
                      |+++||||+|+||.++++.|+++|++|++++|++++..+....  .++.++.+|++|.+++.++++       ++|+|||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5799999999999999999999999999999986543332221  257789999999988877663       6899999


Q ss_pred             cCCCCC------------CccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh
Q 024290          155 CATGRP------------EEPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       155 ~ag~~~------------~~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~  216 (269)
                      ++|...            ++..+++|+.++..++++    +++.+.++||++||....  ..+...|+.+|.+++.+.+.
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~  160 (248)
T PRK10538         81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN  160 (248)
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHH
Confidence            998421            123456788886555544    456677899999997643  34456899999999887643


Q ss_pred             -------cCCCEEEEEcCccccc
Q 024290          217 -------SGLPHVIIRLWPYWAI  232 (269)
Q Consensus       217 -------~gi~~~ilrp~~i~g~  232 (269)
                             .++++++++||.+.+.
T Consensus       161 l~~~~~~~~i~v~~v~pg~i~~~  183 (248)
T PRK10538        161 LRTDLHGTAVRVTDIEPGLVGGT  183 (248)
T ss_pred             HHHHhcCCCcEEEEEeCCeeccc
Confidence                   5899999999999854

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.80  E-value=5.6e-19  Score=151.77  Aligned_cols=154  Identities=14%  Similarity=0.082  Sum_probs=117.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~vi  153 (269)
                      |++++|+||||+|+||.+++++|+++|++|++++|+.....+...+.+..++++|++|++++.++++       ++|+||
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   84 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF   84 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            6789999999999999999999999999999999976544333333344688999999998887774       579999


Q ss_pred             EcCCCCC-------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC-C-C-CCCCcHHHHHHHHHHH
Q 024290          154 DCATGRP-------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC-D-K-HPEVPLMEIKYCTEQF  213 (269)
Q Consensus       154 ~~ag~~~-------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~-~-~-~~~~~y~~sK~~~e~~  213 (269)
                      ||+|...             ++..+++|+.++..+++.+    ++.+.+++|++||... . . .+...|+.+|++++.+
T Consensus        85 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~  164 (255)
T PRK06057         85 NNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAM  164 (255)
T ss_pred             ECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHHHHH
Confidence            9998431             1234557888877666654    4455678999988643 2 2 2456799999887766


Q ss_pred             HH-------hcCCCEEEEEcCcccccCc
Q 024290          214 LQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      .+       ..|+++++++||++.++..
T Consensus       165 ~~~l~~~~~~~gi~v~~i~pg~v~t~~~  192 (255)
T PRK06057        165 SRELGVQFARQGIRVNALCPGPVNTPLL  192 (255)
T ss_pred             HHHHHHHHHhhCcEEEEEeeCCcCCchh
Confidence            54       2589999999999988753

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3.3e-19  Score=154.01  Aligned_cols=154  Identities=18%  Similarity=0.090  Sum_probs=120.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+.+++++||||+|+||.++++.|+++|++|++++|+.++..+...     ..++.++.+|+++++++.++++       
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999997654332211     1246788999999998877663       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH-----cCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA-----MGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~-----~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      ++|+||||||...           ++..+++|+.++.++.+++.+     .+.++||++||...  +..+..+|+.+|.+
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a  166 (263)
T PRK07814         87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAA  166 (263)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHH
Confidence            6899999998421           223456888999999888863     45678999999764  34556789999999


Q ss_pred             HHHHHHh------cCCCEEEEEcCcccccC
Q 024290          210 TEQFLQD------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       210 ~e~~~~~------~gi~~~ilrp~~i~g~~  233 (269)
                      ++.+++.      .+++++.++||.+.++.
T Consensus       167 ~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~  196 (263)
T PRK07814        167 LAHYTRLAALDLCPRIRVNAIAPGSILTSA  196 (263)
T ss_pred             HHHHHHHHHHHHCCCceEEEEEeCCCcCch
Confidence            9988753      35889999999997764

>PRK12742 oxidoreductase; Provisional

Probab=99.80  E-value=3.2e-19  Score=151.32  Aligned_cols=154  Identities=16%  Similarity=0.168  Sum_probs=118.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC-CCCccccccCCCEEEEcCCCCCCcHHHHhc---CccEEEEcC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR-PAPADFLRDWGATVVNADLSKPETIPATLV---GVHTVIDCA  156 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~---~~d~vi~~a  156 (269)
                      +++|+|+||||+|+||+++++.|+++|++|+++.++. +...+...+.++.++.+|++|.+++.++++   ++|++|||+
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a   83 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA   83 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence            6688999999999999999999999999998887643 222222233467888999999888877663   589999999


Q ss_pred             CCCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC---CCCCCcHHHHHHHHHHHHHh----
Q 024290          157 TGRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD---KHPEVPLMEIKYCTEQFLQD----  216 (269)
Q Consensus       157 g~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~---~~~~~~y~~sK~~~e~~~~~----  216 (269)
                      |...           ++..+++|+.++..+++.+...  +.+++|++||....   ..+..+|+.+|.+++.+++.    
T Consensus        84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~  163 (237)
T PRK12742         84 GIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARD  163 (237)
T ss_pred             CCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHH
Confidence            8421           2345668888888887666543  34699999987652   34567899999999987642    


Q ss_pred             ---cCCCEEEEEcCcccccCc
Q 024290          217 ---SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 ---~gi~~~ilrp~~i~g~~~  234 (269)
                         .|+++++|+||.+.+++.
T Consensus       164 ~~~~gi~v~~v~Pg~~~t~~~  184 (237)
T PRK12742        164 FGPRGITINVVQPGPIDTDAN  184 (237)
T ss_pred             HhhhCeEEEEEecCcccCCcc
Confidence               689999999999988753

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=4e-19  Score=152.41  Aligned_cols=152  Identities=19%  Similarity=0.133  Sum_probs=116.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-ccc---cc--cCCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADF---LR--DWGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~---~~--~~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      +|+++||||+|+||+++++.|+++|++|++++|+.... .+.   ++  ..++.++.+|++|++++.++++       .+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999999999864321 111   11  1257889999999988877653       68


Q ss_pred             cEEEEcCCCCC-------------CccchhhcHHHHHHHHHHHHHc-----C-----CCeEEEecccCC--CCCCCCcHH
Q 024290          150 HTVIDCATGRP-------------EEPIKKVDWEGKVALIQCAKAM-----G-----IQKYVFYSIHNC--DKHPEVPLM  204 (269)
Q Consensus       150 d~vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~~~~-----~-----v~r~V~~SS~~~--~~~~~~~y~  204 (269)
                      |+||||+|...             ++..+++|+.++.++++++.+.     +     .++||++||...  +..+...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            99999998421             1233568999998888877432     1     567999999764  345567899


Q ss_pred             HHHHHHHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          205 EIKYCTEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       205 ~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      .+|.++|.+++       ..|+++++++||.++++..
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~  198 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMT  198 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccc
Confidence            99999987764       3689999999999988753

>PRK09186 flagellin modification protein A; Provisional

Probab=99.80  E-value=3.5e-19  Score=152.83  Aligned_cols=153  Identities=18%  Similarity=0.170  Sum_probs=112.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      +++|+++||||+|+||+++++.|+++|++|++++|++++..+...       ...+.++.+|++|++++.++++      
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999998655332211       1235677999999999888774      


Q ss_pred             -CccEEEEcCCCCC--------------CccchhhcHHHHHH----HHHHHHHcCCCeEEEecccCCCCC----------
Q 024290          148 -GVHTVIDCATGRP--------------EEPIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCDKH----------  198 (269)
Q Consensus       148 -~~d~vi~~ag~~~--------------~~~~~~~n~~~~~~----li~a~~~~~v~r~V~~SS~~~~~~----------  198 (269)
                       ++|+|||||+...              +...+++|+.+...    +++.+++.+.++||++||......          
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  161 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS  161 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence             3899999997321              12234566666554    455555667789999998653211          


Q ss_pred             --CCCcHHHHHHHHHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          199 --PEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       199 --~~~~y~~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                        ....|+.+|.+.+.+.+       ..++++++++||.++++.
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~  205 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ  205 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC
Confidence              12369999999988764       368999999999987653

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.6e-18  Score=145.43  Aligned_cols=147  Identities=16%  Similarity=0.142  Sum_probs=115.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc------CccEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV------GVHTVID  154 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~------~~d~vi~  154 (269)
                      |.+|+++||||+|+||+++++.|+++|++|++++|+.+..      ...+++.+|++|.+++.++++      ++|+|||
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~   74 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------FPGELFACDLADIEQTAATLAQINEIHPVDAIVN   74 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEE
Confidence            3468899999999999999999999999999999976541      123678999999998887764      6899999


Q ss_pred             cCCCCCC-----------ccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCC-CCCCCCcHHHHHHHHHHHHHh--
Q 024290          155 CATGRPE-----------EPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNC-DKHPEVPLMEIKYCTEQFLQD--  216 (269)
Q Consensus       155 ~ag~~~~-----------~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~-~~~~~~~y~~sK~~~e~~~~~--  216 (269)
                      |+|....           ...+++|+.+..++.++    +++.+.++||++||... ......+|+.+|.+++.+++.  
T Consensus        75 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~Y~~sK~a~~~~~~~~a  154 (234)
T PRK07577         75 NVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALDRTSYSAAKSALVGCTRTWA  154 (234)
T ss_pred             CCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCCchHHHHHHHHHHHHHHHHH
Confidence            9995322           12455777776665544    45567789999999764 233467899999999877643  


Q ss_pred             -----cCCCEEEEEcCcccccC
Q 024290          217 -----SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       217 -----~gi~~~ilrp~~i~g~~  233 (269)
                           .|+++++++||.+.++.
T Consensus       155 ~e~~~~gi~v~~i~pg~~~t~~  176 (234)
T PRK07577        155 LELAEYGITVNAVAPGPIETEL  176 (234)
T ss_pred             HHHHhhCcEEEEEecCcccCcc
Confidence                 59999999999998875

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.80  E-value=3e-19  Score=150.60  Aligned_cols=157  Identities=20%  Similarity=0.222  Sum_probs=136.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cccC-CCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDW-GATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~-~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      +.++-.+-|.|||||+|+.++.+|.+.|-+|++-.|..+.....   ..++ .+.+...|+.|++++.++++...+|||+
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINL  137 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINL  137 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEe
Confidence            46777899999999999999999999999999999965543222   2333 3778899999999999999999999999


Q ss_pred             CCCCC---CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEEEEEcCccccc
Q 024290          156 ATGRP---EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       156 ag~~~---~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g~  232 (269)
                      .|-..   .-.+.++|..+...|.+.|+++|+.|||++|..++.....+-|-.+|++.|..+++.--+.+|+||..+||.
T Consensus       138 IGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv~s~Sr~LrsK~~gE~aVrdafPeAtIirPa~iyG~  217 (391)
T KOG2865|consen  138 IGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANVKSPSRMLRSKAAGEEAVRDAFPEATIIRPADIYGT  217 (391)
T ss_pred             eccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccccccChHHHHHhhhhhHHHHHhhCCcceeechhhhccc
Confidence            99432   346778999999999999999999999999999988778888999999999999998889999999999997


Q ss_pred             Cccc
Q 024290          233 CSTY  236 (269)
Q Consensus       233 ~~~~  236 (269)
                      .+.+
T Consensus       218 eDrf  221 (391)
T KOG2865|consen  218 EDRF  221 (391)
T ss_pred             chhH
Confidence            6554

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.80  E-value=4.1e-19  Score=151.64  Aligned_cols=154  Identities=17%  Similarity=0.095  Sum_probs=118.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC--CCEEEEcCCCCCCcHHHHh-------cCccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATL-------VGVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~--~~~~i~~Dl~d~~~l~~~~-------~~~d~  151 (269)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+...+...+.  .+.++++|++|.+++..++       .++|+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            56789999999999999999999999999999999754433322222  4678899999988776554       36899


Q ss_pred             EEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHHh
Q 024290          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       152 vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~~  216 (269)
                      ||||+|...           ++..+++|+.++.++++++...  ..+++|+++|...  +.....+|+.+|.+.|.+++.
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~  163 (249)
T PRK06500         84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKT  163 (249)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHHHHHHH
Confidence            999998422           1235678999999999999742  2357888877543  344567899999999988742


Q ss_pred             -------cCCCEEEEEcCcccccCc
Q 024290          217 -------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 -------~gi~~~ilrp~~i~g~~~  234 (269)
                             .|+++++++||.+++++.
T Consensus       164 la~e~~~~gi~v~~i~pg~~~t~~~  188 (249)
T PRK06500        164 LSGELLPRGIRVNAVSPGPVQTPLY  188 (249)
T ss_pred             HHHHhhhcCeEEEEEeeCcCCCHHH
Confidence                   489999999999998753

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.80  E-value=8.5e-19  Score=151.67  Aligned_cols=154  Identities=14%  Similarity=0.065  Sum_probs=117.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...      ..++.++.+|++|+++++++++      
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g   84 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG   84 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence            3678999999999999999999999999999999997654322211      1257789999999998888764      


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHH----HHHHHHHcCCCeEEEecccCCC--CCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~----li~a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~  210 (269)
                      ++|++|||+|...           ++..+++|+.+...    +++.+++.+.++||++||....  ......|+.+|.++
T Consensus        85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal  164 (263)
T PRK08339         85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISM  164 (263)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHH
Confidence            5899999998421           22345677766555    4455556667899999998653  22345699999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccC
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+.+.       .|++++.|.||.+.+++
T Consensus       165 ~~l~~~la~el~~~gIrVn~v~PG~v~T~~  194 (263)
T PRK08339        165 AGLVRTLAKELGPKGITVNGIMPGIIRTDR  194 (263)
T ss_pred             HHHHHHHHHHhcccCeEEEEEEeCcCccHH
Confidence            877643       68999999999998764

>PRK06128 oxidoreductase; Provisional

Probab=99.80  E-value=6e-19  Score=155.44  Aligned_cols=155  Identities=15%  Similarity=0.141  Sum_probs=120.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC--c---ccccc--CCCEEEEcCCCCCCcHHHHh------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--A---DFLRD--WGATVVNADLSKPETIPATL------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~--~---~~~~~--~~~~~i~~Dl~d~~~l~~~~------  146 (269)
                      .+++|++|||||+|+||+++++.|+++|++|++..++.+..  .   +.++.  ..+.++.+|++|.+++.+++      
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999887754321  1   11211  24678899999998887776      


Q ss_pred             -cCccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHHHHH
Q 024290          147 -VGVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (269)
Q Consensus       147 -~~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~sK~~  209 (269)
                       .++|+||||||...            ++..+++|+.++.++++++...  ..++||++||....  ......|+.+|.+
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a  211 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAA  211 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHH
Confidence             36899999998421            2345678999999999998753  23599999998653  2344679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+++.       .|+++++|+||++.+++.
T Consensus       212 ~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~  243 (300)
T PRK06128        212 IVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQ  243 (300)
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEECcCcCCCc
Confidence            9887643       689999999999999863

>PRK08643 acetoin reductase; Validated

Probab=99.79  E-value=1.4e-18  Score=149.19  Aligned_cols=151  Identities=18%  Similarity=0.191  Sum_probs=115.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c--CCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D--WGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      +|+++||||+|+||+++++.|+++|++|++++|+.+...+...   .  .++.++++|++|++.+.++++       ++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999997654322211   1  246788999999998877663       689


Q ss_pred             EEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHH----cC-CCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       151 ~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~----~~-v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      +||||+|....           +..+++|+.++..+++++.+    .+ .++||++||...  +......|+.+|.+++.
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  161 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRG  161 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHH
Confidence            99999985321           23456788887766666543    23 358999998754  23345679999999887


Q ss_pred             HHH-------hcCCCEEEEEcCcccccC
Q 024290          213 FLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       213 ~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +++       ..|++++.|+||++.++.
T Consensus       162 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~  189 (256)
T PRK08643        162 LTQTAARDLASEGITVNAYAPGIVKTPM  189 (256)
T ss_pred             HHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence            664       368999999999998875

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.3e-18  Score=147.68  Aligned_cols=154  Identities=16%  Similarity=0.107  Sum_probs=118.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc----CCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD----WGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~----~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      +++++++||||+|+||++++++|+++|++|++++|++++..+...+    .++.++++|+.|.+++.++++       ++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5568999999999999999999999999999999976543322211    357889999999988877664       68


Q ss_pred             cEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHH---cCCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          150 HTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA---MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       150 d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~---~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      |+|||++|....           +..+++|+.+...+++++.+   .+.+++|++||...  .......|..+|.+++.+
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~  163 (237)
T PRK07326         84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGF  163 (237)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHHHHH
Confidence            999999984321           23456788888888777753   34568999998754  233456799999988766


Q ss_pred             HHh-------cCCCEEEEEcCcccccCc
Q 024290          214 LQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.       .|++++++|||++.+++.
T Consensus       164 ~~~~~~~~~~~gi~v~~v~pg~~~t~~~  191 (237)
T PRK07326        164 SEAAMLDLRQYGIKVSTIMPGSVATHFN  191 (237)
T ss_pred             HHHHHHHhcccCcEEEEEeeccccCccc
Confidence            543       689999999999988754

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.79  E-value=7.4e-19  Score=149.91  Aligned_cols=151  Identities=15%  Similarity=0.058  Sum_probs=113.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-----------CccE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-----------GVHT  151 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-----------~~d~  151 (269)
                      ||+++||||+|+||++++++|+++|++|++++|+.+.........++.++++|+.|.+++.++++           .+|+
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            45899999999999999999999999999999975432111112247788999999998877432           4789


Q ss_pred             EEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          152 VIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       152 vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      +|||+|...            ++..+++|+.+...+.+.+    ++.+.++||++||...  +..+...|+.+|.++|.+
T Consensus        81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (243)
T PRK07023         81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHH  160 (243)
T ss_pred             EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHHHHH
Confidence            999998422            1344568888866555444    4445679999999764  234456799999999988


Q ss_pred             HH------hcCCCEEEEEcCcccccC
Q 024290          214 LQ------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       214 ~~------~~gi~~~ilrp~~i~g~~  233 (269)
                      ++      ..+++++.++||.+-+++
T Consensus       161 ~~~~~~~~~~~i~v~~v~pg~~~t~~  186 (243)
T PRK07023        161 ARAVALDANRALRIVSLAPGVVDTGM  186 (243)
T ss_pred             HHHHHhcCCCCcEEEEecCCccccHH
Confidence            75      258999999999987664

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.79  E-value=1.1e-18  Score=149.34  Aligned_cols=151  Identities=11%  Similarity=0.048  Sum_probs=119.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      .+.+|+++||||+|+||++++++|+++|++|++++|+..  .  .....+.++++|++|.+++.++++       .+|+|
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~--~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL--T--QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh--h--hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            467899999999999999999999999999999999751  1  112357889999999998888764       47999


Q ss_pred             EEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 024290          153 IDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       153 i~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~  215 (269)
                      |||+|...           ++..+++|+.+...+++++.    +.+.++||++||....  ..+...|+.+|.+++.+++
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~  160 (252)
T PRK08220         81 VNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAK  160 (252)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHH
Confidence            99998432           12345688888888887764    3456789999987642  3345779999999988763


Q ss_pred             -------hcCCCEEEEEcCcccccCc
Q 024290          216 -------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 -------~~gi~~~ilrp~~i~g~~~  234 (269)
                             ..|+++++++||.++++..
T Consensus       161 ~la~e~~~~~i~v~~i~pg~v~t~~~  186 (252)
T PRK08220        161 CVGLELAPYGVRCNVVSPGSTDTDMQ  186 (252)
T ss_pred             HHHHHhhHhCeEEEEEecCcCcchhh
Confidence                   2689999999999999853

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3.8e-19  Score=151.68  Aligned_cols=151  Identities=18%  Similarity=0.125  Sum_probs=117.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCCCCCCcHHHHhc----CccEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV----GVHTV  152 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl~d~~~l~~~~~----~~d~v  152 (269)
                      ||+++||||+|+||.++++.|+++|++|++++|++++..+..+      ..+++++++|++|++++.++++    .+|+|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            4789999999999999999999999999999998654332221      1257889999999999888764    46999


Q ss_pred             EEcCCCCCC-----------ccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH
Q 024290          153 IDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       153 i~~ag~~~~-----------~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~  215 (269)
                      |||+|....           ...+++|+.++.++++++.    +.+.++||++||...  +......|+.+|.+++.+.+
T Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  160 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLS  160 (243)
T ss_pred             EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHH
Confidence            999984221           1345688888888877764    346789999998754  23345679999999887654


Q ss_pred             -------hcCCCEEEEEcCcccccC
Q 024290          216 -------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 -------~~gi~~~ilrp~~i~g~~  233 (269)
                             ..|+++++++||.++++.
T Consensus       161 ~l~~el~~~gi~v~~v~pg~v~t~~  185 (243)
T PRK07102        161 GLRNRLFKSGVHVLTVKPGFVRTPM  185 (243)
T ss_pred             HHHHHhhccCcEEEEEecCcccChh
Confidence                   358999999999998874

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.79  E-value=7.7e-19  Score=155.12  Aligned_cols=155  Identities=15%  Similarity=0.038  Sum_probs=115.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cc----cCCCEEEEcCCCCCCcHHHHhc-----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~----~~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      ++++|+|+||||+|+||+++++.|+++|++|++++|+.++..+.   +.    ...+.++.+|++|.+++.++++     
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            46789999999999999999999999999999999975443211   11    1247788999999998877753     


Q ss_pred             --CccEEEEcCCCC---------CCccchhhcHHH----HHHHHHHHHHcCCCeEEEecccCCC---------------C
Q 024290          148 --GVHTVIDCATGR---------PEEPIKKVDWEG----KVALIQCAKAMGIQKYVFYSIHNCD---------------K  197 (269)
Q Consensus       148 --~~d~vi~~ag~~---------~~~~~~~~n~~~----~~~li~a~~~~~v~r~V~~SS~~~~---------------~  197 (269)
                        ++|+||||||..         ..+..+++|+.+    +..+++.+++.+.++||++||....               .
T Consensus        93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~  172 (306)
T PRK06197         93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRY  172 (306)
T ss_pred             CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCC
Confidence              589999999842         224456789888    4556666666666799999986421               1


Q ss_pred             CCCCcHHHHHHHHHHHHHh-------cCCCEEEE--EcCcccccCc
Q 024290          198 HPEVPLMEIKYCTEQFLQD-------SGLPHVII--RLWPYWAICS  234 (269)
Q Consensus       198 ~~~~~y~~sK~~~e~~~~~-------~gi~~~il--rp~~i~g~~~  234 (269)
                      .+..+|+.+|.+.+.+.+.       .+++++++  .||.+.+++.
T Consensus       173 ~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~  218 (306)
T PRK06197        173 NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA  218 (306)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence            2335799999999877642       46666554  6999987653

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.79  E-value=5.6e-19  Score=153.66  Aligned_cols=155  Identities=17%  Similarity=0.111  Sum_probs=118.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c--CCCEEEEcCCCCCCcHHHHh-------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D--WGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      .+.+|+++||||+|+||+++++.|+++|++|++++|+.+...+..+   .  .++.++++|+.|.+++.+++       .
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999997544322211   1  24678899999998887765       3


Q ss_pred             CccEEEEcCCCCC--------------------------CccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCCC-
Q 024290          148 GVHTVIDCATGRP--------------------------EEPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNCD-  196 (269)
Q Consensus       148 ~~d~vi~~ag~~~--------------------------~~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~~-  196 (269)
                      ++|+||||+|...                          ++..+++|+.+...++++    +++.+.++||++||.... 
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~  166 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT  166 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence            6899999998421                          112345777777655444    445566799999987653 


Q ss_pred             -CCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          197 -KHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       197 -~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                       ......|+.+|.+++.+++.       .|++++.|+||.+.++..
T Consensus       167 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~  212 (278)
T PRK08277        167 PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQN  212 (278)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcch
Confidence             34456799999999987753       589999999999998753

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.79  E-value=6.3e-19  Score=151.37  Aligned_cols=155  Identities=13%  Similarity=0.027  Sum_probs=119.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+|+||||+|+||+++++.|+++|++|++++|+.++..+...     ..++.++.+|+++.+++.++++       
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4778999999999999999999999999999999998654332211     1247789999999988888764       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cC--------CCeEEEecccCCC--CCCCCc
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MG--------IQKYVFYSIHNCD--KHPEVP  202 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~--------v~r~V~~SS~~~~--~~~~~~  202 (269)
                      ++|+||||+|...           ++..+++|+.+...+++++..    ..        .+++|++||....  .....+
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  165 (258)
T PRK06949         86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGL  165 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccH
Confidence            5899999999421           223456788888877776642    22        3589999987642  234568


Q ss_pred             HHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          203 LMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       203 y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      |+.+|.+.+.+++.       .++++++++||++++++.
T Consensus       166 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~  204 (258)
T PRK06949        166 YCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN  204 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence            99999998877643       589999999999998864

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=6.7e-19  Score=150.71  Aligned_cols=152  Identities=17%  Similarity=0.160  Sum_probs=116.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Ccccccc--CCCEEEEcCCCCCCcHHHHhc-------C-c
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFLRD--WGATVVNADLSKPETIPATLV-------G-V  149 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~-~  149 (269)
                      +++|+++||||+|+||+++++.|+++|++|+++.++.+. .......  .++.++++|+.|++++.++++       + +
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   82 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI   82 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            456899999999999999999999999999887664322 1111111  257789999999988887764       2 8


Q ss_pred             cEEEEcCCCCC-----------------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHH
Q 024290          150 HTVIDCATGRP-----------------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       150 d~vi~~ag~~~-----------------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                      |++|||+|...                 ++..+++|+.+..++++++.    +.+.++||++||...  ...+..+|+.+
T Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  162 (253)
T PRK08642         83 TTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTA  162 (253)
T ss_pred             eEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHH
Confidence            99999997421                 11246788999888888875    345679999998654  23356789999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCccccc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAI  232 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~  232 (269)
                      |.+++.+++.       .|++++.|+||++.++
T Consensus       163 K~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~  195 (253)
T PRK08642        163 KAALLGLTRNLAAELGPYGITVNMVSGGLLRTT  195 (253)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeecccCCc
Confidence            9999988754       5799999999999775

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.79  E-value=5e-19  Score=150.71  Aligned_cols=152  Identities=16%  Similarity=0.121  Sum_probs=117.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c--CCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D--WGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      ++|+++||||+|+||+.++++|+++|++|++++|++++..+...   .  .++.++.+|++|.+++.++++       ++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999997654332211   1  257789999999998877764       58


Q ss_pred             cEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          150 HTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       150 d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      |+||||+|...           ++..+++|+.++.++++++    ++.+.++||++||...  +.....+|+.+|.+++.
T Consensus        85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~  164 (241)
T PRK07454         85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAA  164 (241)
T ss_pred             CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHH
Confidence            99999999432           1234557888877766655    4555679999999764  23445689999999987


Q ss_pred             HHH-------hcCCCEEEEEcCcccccC
Q 024290          213 FLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       213 ~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +.+       ..|++++++|||++.++.
T Consensus       165 ~~~~~a~e~~~~gi~v~~i~pg~i~t~~  192 (241)
T PRK07454        165 FTKCLAEEERSHGIRVCTITLGAVNTPL  192 (241)
T ss_pred             HHHHHHHHhhhhCCEEEEEecCcccCCc
Confidence            753       358999999999998765

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.6e-18  Score=150.67  Aligned_cols=153  Identities=14%  Similarity=0.143  Sum_probs=117.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      +.+|+++||||+|+||+++++.|+++|++|++++|+.+...+..   ..  ..+.++.+|++|.+++.++++       +
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            55689999999999999999999999999999998754332221   11  246778999999999887764       5


Q ss_pred             ccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHH
Q 024290          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (269)
Q Consensus       149 ~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e  211 (269)
                      +|+||||+|....           +..+++|+.++.++++++.    +.+.++||++||....  .....+|+.+|.++|
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  167 (274)
T PRK07775         88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLE  167 (274)
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHH
Confidence            7999999984321           1234688899888877764    3456689999997542  233467999999999


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccC
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .+++.       .|++++++|||.+.+..
T Consensus       168 ~l~~~~~~~~~~~gi~v~~v~pG~~~t~~  196 (274)
T PRK07775        168 AMVTNLQMELEGTGVRASIVHPGPTLTGM  196 (274)
T ss_pred             HHHHHHHHHhcccCeEEEEEeCCcccCcc
Confidence            87753       48999999999886653

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.79  E-value=9.5e-19  Score=149.52  Aligned_cols=154  Identities=18%  Similarity=0.087  Sum_probs=118.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Ccccccc--CCCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFLRD--WGATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~~~~--~~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      +++|+++||||+|+||++++++|+++|++|++++|+... ..+.+..  ..+.++.+|++|.+++.+++       .++|
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            678999999999999999999999999999999986421 1111222  24788999999999887665       3589


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cC-CCeEEEecccCCC--CCCCCcHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~-v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~  212 (269)
                      +||||+|...           ++..+++|+.+..++++++.+    .+ .+++|++||....  ......|+.+|.+++.
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  162 (248)
T TIGR01832        83 ILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAG  162 (248)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHH
Confidence            9999998422           223456888888888887743    33 4689999987542  2345679999999988


Q ss_pred             HHHh-------cCCCEEEEEcCcccccCc
Q 024290          213 FLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.       .|+++++++||.+.++..
T Consensus       163 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~  191 (248)
T TIGR01832       163 LTKLLANEWAAKGINVNAIAPGYMATNNT  191 (248)
T ss_pred             HHHHHHHHhCccCcEEEEEEECcCcCcch
Confidence            7643       589999999999988753

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.79  E-value=3.1e-18  Score=148.01  Aligned_cols=147  Identities=15%  Similarity=0.100  Sum_probs=117.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.....    ..++.++.+|++|++++.++++       .+|+|
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   81 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGL   81 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            477899999999999999999999999999999999765432    2357789999999998877663       58999


Q ss_pred             EEcCCCCCC--------------------ccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHHH
Q 024290          153 IDCATGRPE--------------------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       153 i~~ag~~~~--------------------~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                      |||||....                    +..+++|+.++..+++++..    .+.++||++||...  +......|+.+
T Consensus        82 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (266)
T PRK06171         82 VNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAAT  161 (266)
T ss_pred             EECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHH
Confidence            999984211                    22456888888888877753    34568999999765  23445789999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCccc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYW  230 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~  230 (269)
                      |.+++.+++.       .|+++++|+||.+.
T Consensus       162 K~a~~~l~~~la~e~~~~gi~v~~v~pG~~~  192 (266)
T PRK06171        162 KAALNSFTRSWAKELGKHNIRVVGVAPGILE  192 (266)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence            9999887643       68999999999885

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.1e-18  Score=147.41  Aligned_cols=152  Identities=15%  Similarity=0.128  Sum_probs=117.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c----cCCCEEEEcCCCCCCcHHHHh-------cC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R----DWGATVVNADLSKPETIPATL-------VG  148 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~----~~~~~~i~~Dl~d~~~l~~~~-------~~  148 (269)
                      +|+++||||+|+||++++++|+++|++|++++|++++..+..   .    ...+.++++|++|++++.+++       .+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999865432221   1    224788899999998887765       36


Q ss_pred             ccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC-CC--CCCcHHHHHHHH
Q 024290          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD-KH--PEVPLMEIKYCT  210 (269)
Q Consensus       149 ~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~-~~--~~~~y~~sK~~~  210 (269)
                      +|+||||+|....           +..+++|+.+..++++++    ++.+.++||++||.... ..  +...|+.+|.++
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~  161 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGV  161 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHH
Confidence            8999999984321           234568888888777765    45567899999997542 22  346799999998


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.+.       .++++++++||++.++..
T Consensus       162 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~  192 (248)
T PRK08251        162 ASLGEGLRAELAKTPIKVSTIEPGYIRSEMN  192 (248)
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCcCcchhh
Confidence            876642       579999999999988754

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.79  E-value=4.4e-19  Score=152.69  Aligned_cols=154  Identities=16%  Similarity=0.091  Sum_probs=119.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHh-------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      .+++|+++||||+|+||.++++.|+++|++|++++|+.++.....   ..  ..+.++++|++|++++.+++       .
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            367899999999999999999999999999999999755432221   11  24678999999999887665       3


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc-----CCCeEEEecccCCC--CC----CCCcHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM-----GIQKYVFYSIHNCD--KH----PEVPLME  205 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~-----~v~r~V~~SS~~~~--~~----~~~~y~~  205 (269)
                      ++|+||||+|...           ++..+++|+.++.++++++.+.     +.++||++||....  ..    +..+|+.
T Consensus        89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~  168 (259)
T PRK08213         89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNT  168 (259)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHH
Confidence            5899999998421           1234568999999999987544     56799999986532  11    2378999


Q ss_pred             HHHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          206 IKYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       206 sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +|.+++.+++.       .|+++++++||.+.++.
T Consensus       169 sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~  203 (259)
T PRK08213        169 SKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKM  203 (259)
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcc
Confidence            99999987753       58999999999997764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.79  E-value=6.7e-19  Score=151.57  Aligned_cols=154  Identities=13%  Similarity=0.077  Sum_probs=118.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc---cccc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~---~~~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+.+|+++||||+|+||.++++.|+++|++|+++.|+ ++..+   .+.+  ..+.++++|++|.+++.++++       
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   90 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG   90 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999987 32211   1221  247789999999998887764       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~  210 (269)
                      ++|++|||+|...           ++..+++|+.+...+.+++    ++.+.+++|++||....  ......|+.+|.++
T Consensus        91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  170 (258)
T PRK06935         91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGV  170 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHH
Confidence            6899999998422           1234567888876666554    45566799999997642  33446899999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+++.       .|++++.|+||.+.++..
T Consensus       171 ~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~  201 (258)
T PRK06935        171 AGLTKAFANELAAYNIQVNAIAPGYIKTANT  201 (258)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEeccccccch
Confidence            987643       589999999999988753

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.79  E-value=9.4e-19  Score=150.58  Aligned_cols=150  Identities=15%  Similarity=0.085  Sum_probs=114.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHh-------cC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATL-------VG  148 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~-------~~  148 (269)
                      +|+|+||||+|+||+++++.|+++|++|++++|+.+...+...       ...+.++.+|++|.+++.+++       .+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999997654332211       124788999999998887765       36


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cC-CCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~-v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      +|+||||+|...           ++..+++|+.++..+++++.+    .+ -++||++||...  +.....+|+.+|.++
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~  161 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG  161 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHH
Confidence            799999998421           123456888888776666643    45 359999998653  334456899999998


Q ss_pred             HHHHH-------hcCCCEEEEEcCccccc
Q 024290          211 EQFLQ-------DSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       211 e~~~~-------~~gi~~~ilrp~~i~g~  232 (269)
                      +.+++       ..|+++++++||.+++.
T Consensus       162 ~~l~~~la~e~~~~gi~v~~v~pg~~~~~  190 (259)
T PRK12384        162 VGLTQSLALDLAEYGITVHSLMLGNLLKS  190 (259)
T ss_pred             HHHHHHHHHHHHHcCcEEEEEecCCcccc
Confidence            76653       37899999999988764

>PRK08589 short chain dehydrogenase; Validated

Probab=99.79  E-value=7.4e-19  Score=152.68  Aligned_cols=152  Identities=14%  Similarity=0.094  Sum_probs=116.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      +++|+++||||+|+||+++++.|+++|++|++++|+ +...+..   .+  .++.++.+|++|++++.++++       +
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999997 4332222   11  247789999999988877663       5


Q ss_pred             ccEEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHH
Q 024290          149 VHTVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (269)
Q Consensus       149 ~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~  210 (269)
                      +|++|||||...            ++..+++|+.+...+++++    ++.+ ++||++||....  ......|+.+|.++
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal  161 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAV  161 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHH
Confidence            899999998532            1223457877776655554    4444 699999997642  33456899999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+++.       .|++++.|.||.+.+++.
T Consensus       162 ~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  192 (272)
T PRK08589        162 INFTKSIAIEYGRDGIRANAIAPGTIETPLV  192 (272)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCcccCchh
Confidence            987653       589999999999987753

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.79  E-value=1.6e-18  Score=149.66  Aligned_cols=154  Identities=14%  Similarity=0.094  Sum_probs=117.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHh-------cCccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATL-------VGVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~-------~~~d~  151 (269)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.+...+....  ..+.++++|+.|.+++.+++       .++|+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            5689999999999999999999999999999999976544332222  24678899999988877665       36899


Q ss_pred             EEEcCCCCC----------------CccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          152 VIDCATGRP----------------EEPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       152 vi~~ag~~~----------------~~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      +|||||...                ++..+++|+.++..+++++.+.   ..+++|+++|...  +......|+.+|.++
T Consensus        83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~  162 (262)
T TIGR03325        83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAV  162 (262)
T ss_pred             EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhHHHHHHH
Confidence            999998411                2245678999998888887542   2257888887654  223345799999999


Q ss_pred             HHHHHh------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+++.      ..++++.|.||++.+++.
T Consensus       163 ~~l~~~la~e~~~~irvn~i~PG~i~t~~~  192 (262)
T TIGR03325       163 VGLVKELAFELAPYVRVNGVAPGGMSSDLR  192 (262)
T ss_pred             HHHHHHHHHhhccCeEEEEEecCCCcCCCc
Confidence            987743      238999999999987753

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.1e-18  Score=148.25  Aligned_cols=155  Identities=14%  Similarity=0.065  Sum_probs=118.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-ccc---ccc--CCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADF---LRD--WGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+.. .+.   +..  ..+.++.+|++|++++.++++      
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            47789999999999999999999999999999999975432 211   111  246788999999988877663      


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCCC-C---CCCcHHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK-H---PEVPLMEIK  207 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~~-~---~~~~y~~sK  207 (269)
                       ++|+||||+|...           ++..+++|+.++..+++++    ++.+.++||++||..... .   ....|+.+|
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK  164 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASK  164 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHH
Confidence             5799999999532           2334568888887766654    445567999999875421 1   246799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.+++.       .|+++++++||++.+++.
T Consensus       165 aa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~  198 (254)
T PRK06114        165 AGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMN  198 (254)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeecCccCccc
Confidence            998877643       689999999999988754

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.79  E-value=1.4e-18  Score=151.62  Aligned_cols=143  Identities=23%  Similarity=0.238  Sum_probs=100.6

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC----C
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP----E  161 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~----~  161 (269)
                      ||||||+||||+++++.|+++|++|++++|+++....... ..    ..|+.. +.+.+.+.++|+|||+|+...    +
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~----~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~   74 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-EG----YKPWAP-LAESEALEGADAVINLAGEPIADKRW   74 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-ee----eecccc-cchhhhcCCCCEEEECCCCCcccccC
Confidence            6899999999999999999999999999998765432111 11    123322 455667789999999998422    1


Q ss_pred             -----ccchhhcHHHHHHHHHHHHHcCCC--eEEEecccCC----------CCC---CCCcHHHHHHHHHHHH---HhcC
Q 024290          162 -----EPIKKVDWEGKVALIQCAKAMGIQ--KYVFYSIHNC----------DKH---PEVPLMEIKYCTEQFL---QDSG  218 (269)
Q Consensus       162 -----~~~~~~n~~~~~~li~a~~~~~v~--r~V~~SS~~~----------~~~---~~~~y~~sK~~~e~~~---~~~g  218 (269)
                           ..++++|+.++.++++++++.+++  +||+.|+...          +..   +...|+..+...|..+   ++.+
T Consensus        75 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~~~~~  154 (292)
T TIGR01777        75 TEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAAEDLG  154 (292)
T ss_pred             CHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhchhcC
Confidence                 235568999999999999999874  4555555321          111   1112455555556544   3468


Q ss_pred             CCEEEEEcCcccccCc
Q 024290          219 LPHVIIRLWPYWAICS  234 (269)
Q Consensus       219 i~~~ilrp~~i~g~~~  234 (269)
                      ++++++||+++||+..
T Consensus       155 ~~~~ilR~~~v~G~~~  170 (292)
T TIGR01777       155 TRVVLLRTGIVLGPKG  170 (292)
T ss_pred             CceEEEeeeeEECCCc
Confidence            9999999999999854

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.79  E-value=7.9e-19  Score=148.27  Aligned_cols=148  Identities=13%  Similarity=0.092  Sum_probs=116.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc----CccEEEEcCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV----GVHTVIDCATGR  159 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~----~~d~vi~~ag~~  159 (269)
                      |+++||||+|+||+++++.|+++|++|++++|+.++..+..++.++.++++|++|++++.++++    ++|++|||+|..
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~   80 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS   80 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence            3699999999999999999999999999999986554443334467889999999999888774    589999998731


Q ss_pred             ----------------CCccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCCCCCCCcHHHHHHHHHHHHH------
Q 024290          160 ----------------PEEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQ------  215 (269)
Q Consensus       160 ----------------~~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~------  215 (269)
                                      .++..+++|+.++..+++++...  ..++||++||..  ......|+.+|.+++.+.+      
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~--~~~~~~Y~asKaal~~~~~~la~e~  158 (223)
T PRK05884         81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN--PPAGSAEAAIKAALSNWTAGQAAVF  158 (223)
T ss_pred             ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC--CCCccccHHHHHHHHHHHHHHHHHh
Confidence                            01234568888988888877542  236899999876  2345789999999988764      


Q ss_pred             -hcCCCEEEEEcCcccccC
Q 024290          216 -DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 -~~gi~~~ilrp~~i~g~~  233 (269)
                       ..|++++.|.||++..+.
T Consensus       159 ~~~gI~v~~v~PG~v~t~~  177 (223)
T PRK05884        159 GTRGITINAVACGRSVQPG  177 (223)
T ss_pred             hhcCeEEEEEecCccCchh
Confidence             368999999999997653

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.78  E-value=1.7e-18  Score=148.72  Aligned_cols=155  Identities=14%  Similarity=0.145  Sum_probs=120.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      ..+++|+++||||+|+||+++++.|+++|++|++++|+++...+...     ..++.++.+|++|++++.++++      
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH   86 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            34778999999999999999999999999999999998654322211     1247889999999988877763      


Q ss_pred             -CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~  209 (269)
                       ++|+||||+|....           +..+.+|+.++..+++++.    +.+.++||++||....  .....+|+.+|.+
T Consensus        87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a  166 (256)
T PRK06124         87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQG  166 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHH
Confidence             57999999995321           2345678888888776553    4667899999987642  3345679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      ++.+++.       .+++++.|+||.+.++.
T Consensus       167 ~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~  197 (256)
T PRK06124        167 LTGLMRALAAEFGPHGITSNAIAPGYFATET  197 (256)
T ss_pred             HHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence            9877643       58999999999999875

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.8e-18  Score=148.19  Aligned_cols=155  Identities=15%  Similarity=0.062  Sum_probs=119.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+++||||+|+||.++++.|+++|++|++++|+.++..+..+   +  ..+.++++|+.|.+++.++++       
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG   84 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999997544322221   1  136778999999988877653       


Q ss_pred             CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 ~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      .+|+||||+|...            ++..+++|+.+...+++++    ++.+.+++|++||...  +..+..+|+.+|.+
T Consensus        85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  164 (252)
T PRK07035         85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAA  164 (252)
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHH
Confidence            5899999998421            1234568888887776665    4556679999998754  33456789999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+++.       .|++++.+.||.+.+++.
T Consensus       165 l~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~  196 (252)
T PRK07035        165 VISMTKAFAKECAPFGIRVNALLPGLTDTKFA  196 (252)
T ss_pred             HHHHHHHHHHHHhhcCEEEEEEeeccccCccc
Confidence            9987753       589999999999987653

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.78  E-value=1.7e-18  Score=147.02  Aligned_cols=149  Identities=18%  Similarity=0.182  Sum_probs=114.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-------cCccEEEEc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-------VGVHTVIDC  155 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-------~~~d~vi~~  155 (269)
                      +|+++||||+|+||+++++.|+++|++|++++|+++...+.+...++.++.+|+.|.+++.+++       .++|++|||
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            5789999999999999999999999999999998655444444456788999999999887765       358999999


Q ss_pred             CCCCC-----------CccchhhcHHHHHHHHHHHH----HcC--CCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh
Q 024290          156 ATGRP-----------EEPIKKVDWEGKVALIQCAK----AMG--IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       156 ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~--v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~  216 (269)
                      +|...           ++..+++|+.++..+.+++.    +.+  .+++|++||....  ......|+.+|.+++.+++.
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~~  161 (236)
T PRK06483         82 ASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLS  161 (236)
T ss_pred             CccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHHH
Confidence            98421           12345678777776655553    333  4689999987542  33456799999999988753


Q ss_pred             ------cCCCEEEEEcCcccc
Q 024290          217 ------SGLPHVIIRLWPYWA  231 (269)
Q Consensus       217 ------~gi~~~ilrp~~i~g  231 (269)
                            .++++++|+||++..
T Consensus       162 ~a~e~~~~irvn~v~Pg~~~~  182 (236)
T PRK06483        162 FAAKLAPEVKVNSIAPALILF  182 (236)
T ss_pred             HHHHHCCCcEEEEEccCceec
Confidence                  359999999999854

>PRK12320 hypothetical protein; Provisional

Probab=99.78  E-value=3.4e-18  Score=163.85  Aligned_cols=137  Identities=23%  Similarity=0.250  Sum_probs=111.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCCcc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~  163 (269)
                      ||||||||+||||++|++.|+++|++|++++|.+...    ...+++++.+|++|+. +.+++.++|+|||+++..... 
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~-   74 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTSA-   74 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCccc-
Confidence            4799999999999999999999999999999864331    1236889999999884 778888999999999864322 


Q ss_pred             chhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEEEEEcCcccccCc
Q 024290          164 IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       164 ~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g~~~  234 (269)
                      ...+|+.++.+++++|++.|+ ++||+||....  + ..|.    ..|.++...+++++++|++++||+..
T Consensus        75 ~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~G~--~-~~~~----~aE~ll~~~~~p~~ILR~~nVYGp~~  137 (699)
T PRK12320         75 PGGVGITGLAHVANAAARAGA-RLLFVSQAAGR--P-ELYR----QAETLVSTGWAPSLVIRIAPPVGRQL  137 (699)
T ss_pred             hhhHHHHHHHHHHHHHHHcCC-eEEEEECCCCC--C-cccc----HHHHHHHhcCCCEEEEeCceecCCCC
Confidence            235899999999999999997 79999986421  1 2232    57888888889999999999999843

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=2.5e-18  Score=146.42  Aligned_cols=155  Identities=20%  Similarity=0.128  Sum_probs=118.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-eCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+|+||.++++.|+++|++|+++ +|+.+...+...     ...+.++.+|++|++++.++++      
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3677899999999999999999999999999998 887554322211     1247789999999998877764      


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                       ++|+|||++|...           ++..+.+|+.+..++++++.    +.+.++||++||...  ......+|+.+|.+
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a  161 (247)
T PRK05565         82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGA  161 (247)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHH
Confidence             7899999998532           12345678888777777664    445678999998754  33445679999988


Q ss_pred             HHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.+++       ..|+++++++||.+.++..
T Consensus       162 ~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~  193 (247)
T PRK05565        162 VNAFTKALAKELAPSGIRVNAVAPGAIDTEMW  193 (247)
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEEECCccCccc
Confidence            877653       3689999999999977654

>PRK09242 tropinone reductase; Provisional

Probab=99.78  E-value=1.8e-18  Score=148.75  Aligned_cols=155  Identities=21%  Similarity=0.189  Sum_probs=120.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHh------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATL------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~------  146 (269)
                      .+.+|+++||||+|+||+++++.|+++|++|++++|+.+...+...       ...+.++.+|+++.+++.+++      
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999997654332211       124678899999998876665      


Q ss_pred             -cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHH
Q 024290          147 -VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (269)
Q Consensus       147 -~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~  208 (269)
                       .++|+||||+|...           ++..+++|+.++..+++++.    +.+.++||++||...  +......|+.+|.
T Consensus        86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~  165 (257)
T PRK09242         86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKA  165 (257)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHH
Confidence             36899999998521           12345688888888877764    456679999999764  3445678999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+++.       .+++++.++||++.++..
T Consensus       166 a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~  198 (257)
T PRK09242        166 ALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLT  198 (257)
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEEECCCCCccc
Confidence            99987653       589999999999988753

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.78  E-value=1.1e-18  Score=150.92  Aligned_cols=155  Identities=11%  Similarity=0.035  Sum_probs=120.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+.+|+++||||+|+||.+++++|+++|++|+++.|+.++..+..   ..  .++.++++|++|.+++.++++       
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            467899999999999999999999999999999998765433222   11  147788999999999888763       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++|+||||+|...           ++..+++|+.+...+++++    ++.+.++||++||...  +..+..+|+.+|.++
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal  166 (265)
T PRK07097         87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGL  166 (265)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHH
Confidence            4899999999522           1234557888877666655    4456679999998653  334567899999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+++.       .|++++.|+||.+.++..
T Consensus       167 ~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  197 (265)
T PRK07097        167 KMLTKNIASEYGEANIQCNGIGPGYIATPQT  197 (265)
T ss_pred             HHHHHHHHHHhhhcCceEEEEEeccccccch
Confidence            887643       589999999999988753

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.78  E-value=9.4e-19  Score=150.28  Aligned_cols=155  Identities=11%  Similarity=0.030  Sum_probs=118.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Ccccccc--CCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFLRD--WGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      .+.+|+++||||+++||++++++|+++|++|++++|+... ..+.+..  .++.++.+|++|.+++.++++       ++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999886421 1111222  246788999999999887763       58


Q ss_pred             cEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcC-CCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          150 HTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       150 d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~-v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      |++|||||...           ++..+++|+.++..+.+++.    +.+ .++||++||...  +......|+.+|.+++
T Consensus        85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~  164 (251)
T PRK12481         85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVM  164 (251)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHH
Confidence            99999999422           23456789888887777653    333 369999999754  2334468999999999


Q ss_pred             HHHH-------hcCCCEEEEEcCcccccCc
Q 024290          212 QFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.+       ..|++++.++||.+.++..
T Consensus       165 ~l~~~la~e~~~~girvn~v~PG~v~t~~~  194 (251)
T PRK12481        165 GLTRALATELSQYNINVNAIAPGYMATDNT  194 (251)
T ss_pred             HHHHHHHHHHhhcCeEEEEEecCCCccCch
Confidence            8764       3689999999999987653

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.3e-18  Score=151.48  Aligned_cols=155  Identities=15%  Similarity=0.063  Sum_probs=119.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc----CCCEEEEcCCCCCCcHHHHh-------cC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD----WGATVVNADLSKPETIPATL-------VG  148 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~----~~~~~i~~Dl~d~~~l~~~~-------~~  148 (269)
                      ++.+++++||||+|+||.++++.|+++|++|++++|+.++..+...+    ..+..+.+|++|.+++.+++       .+
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            47789999999999999999999999999999999986544332221    23455669999998887765       46


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCCC--CCCCCcHHHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~  212 (269)
                      +|+||||+|...           ++..+++|+.++.++++++...   ..++||++||....  ......|+.+|.+++.
T Consensus        86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~  165 (296)
T PRK05872         86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEA  165 (296)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHHHHHHH
Confidence            899999999522           1345678999998888877532   23689999997642  3345679999999998


Q ss_pred             HHH-------hcCCCEEEEEcCcccccCc
Q 024290          213 FLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+       ..|+.++++.||++.+++.
T Consensus       166 ~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  194 (296)
T PRK05872        166 FANALRLEVAHHGVTVGSAYLSWIDTDLV  194 (296)
T ss_pred             HHHHHHHHHHHHCcEEEEEecCcccchhh
Confidence            764       3689999999999987653

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.78  E-value=5.1e-19  Score=151.86  Aligned_cols=155  Identities=12%  Similarity=0.065  Sum_probs=118.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c--CCCEEEEcCCCCCCcHHHHh-------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D--WGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...   .  .++..+.+|++|++++.+++       .
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999997654332211   1  24678899999999887776       3


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcC-CCeEEEecccCCC--C-C-CCCcHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNCD--K-H-PEVPLMEIK  207 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~-v~r~V~~SS~~~~--~-~-~~~~y~~sK  207 (269)
                      ++|++|||+|...           ++..+++|+.+...+++++.    +.+ .+++|++||....  . . ....|+.+|
T Consensus        86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asK  165 (253)
T PRK05867         86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASK  165 (253)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHH
Confidence            7899999999432           22345688888888877764    332 2479999887542  1 1 236799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.+.+.       .|++++.++||.+.+++.
T Consensus       166 aal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~  199 (253)
T PRK05867        166 AAVIHLTKAMAVELAPHKIRVNSVSPGYILTELV  199 (253)
T ss_pred             HHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccc
Confidence            999987653       589999999999987753

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.78  E-value=1.6e-18  Score=147.50  Aligned_cols=155  Identities=14%  Similarity=0.064  Sum_probs=118.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      .+++++++||||+|+||+++++.|+++|+.|++.+|+.++..+....  .++.++.+|++|.+++.+++       .++|
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVD   82 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            35678999999999999999999999999998888876544332222  24778899999998887764       4689


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      +||||+|...           ++..+++|+.+..++++++.    +.+.++||++||...  +......|+.+|.+++.+
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~  162 (245)
T PRK12936         83 ILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGF  162 (245)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHH
Confidence            9999998422           23345688888888777654    345679999999643  233456799999988766


Q ss_pred             HH-------hcCCCEEEEEcCcccccCc
Q 024290          214 LQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++       ..++++++++||++.+++.
T Consensus       163 ~~~la~~~~~~~i~v~~i~pg~~~t~~~  190 (245)
T PRK12936        163 SKSLAQEIATRNVTVNCVAPGFIESAMT  190 (245)
T ss_pred             HHHHHHHhhHhCeEEEEEEECcCcCchh
Confidence            53       2589999999999877643

>PRK12743 oxidoreductase; Provisional

Probab=99.78  E-value=1.2e-18  Score=150.00  Aligned_cols=153  Identities=13%  Similarity=0.081  Sum_probs=116.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Cccc---ccc--CCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADF---LRD--WGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      ++|+++||||+|+||+++++.|+++|++|+++.++... ..+.   +..  ..+.++.+|++|++++.++++       .
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999988764332 2111   111  247889999999988877663       5


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc----C-CCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~----~-v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      +|+||||+|...           ++..+++|+.+...+++++.+.    + .++||++||...  +..+...|+.+|.++
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  160 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL  160 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence            899999998422           1234568899999888877542    2 358999998764  334556899999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+++.       .|++++.|+||.++++..
T Consensus       161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~  191 (256)
T PRK12743        161 GGLTKAMALELVEHGILVNAVAPGAIATPMN  191 (256)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEeCCccCccc
Confidence            887643       589999999999998753

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.78  E-value=1.5e-18  Score=149.26  Aligned_cols=154  Identities=16%  Similarity=0.116  Sum_probs=116.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---c----ccCCCEEEEcCCCCCCcHHHHh------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---L----RDWGATVVNADLSKPETIPATL------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~----~~~~~~~i~~Dl~d~~~l~~~~------  146 (269)
                      .+.+|.|+||||+++||.+++.+|+++|..++.+.|...++...   +    ....+.++++|++|.+++.+++      
T Consensus         9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen    9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence            47889999999999999999999999999988888876554332   1    1114889999999999998665      


Q ss_pred             -cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCCC--CCCCcHHHHHH
Q 024290          147 -VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKY  208 (269)
Q Consensus       147 -~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~~--~~~~~y~~sK~  208 (269)
                       +++|++|||||...           ....+++|+.|+..+.+++    ++.+-++||.+||+.+..  +....|.+||+
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~  168 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKH  168 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHH
Confidence             58999999999422           2346789999876665555    566667999999987632  22347999999


Q ss_pred             HHHHHHHh-------cCCCEE-EEEcCcccccC
Q 024290          209 CTEQFLQD-------SGLPHV-IIRLWPYWAIC  233 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~-ilrp~~i~g~~  233 (269)
                      +++.+.+.       .+..+. ++.||+|-+.+
T Consensus       169 Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~  201 (282)
T KOG1205|consen  169 ALEGFFETLRQELIPLGTIIIILVSPGPIETEF  201 (282)
T ss_pred             HHHHHHHHHHHHhhccCceEEEEEecCceeecc
Confidence            99987632       222222 58999997764

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=2.7e-18  Score=146.84  Aligned_cols=154  Identities=14%  Similarity=-0.001  Sum_probs=116.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Ccccc---cc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFL---RD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +.+++++||||+|+||++++++|+++|++|++..|+... ..+..   ..  ..+.++.+|+++++++.++++       
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            567899999999999999999999999999887764322 11111   11  135678899999988877653       


Q ss_pred             CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       148 ~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      ++|+||||+|....           +..+++|+.+..++++++.+.  ..++||++||...  +..+..+|+.+|.++|.
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~  163 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVIN  163 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHHHHH
Confidence            68999999984211           234567888888888877653  2358999999765  34456789999999988


Q ss_pred             HHHh------cCCCEEEEEcCcccccCc
Q 024290          213 FLQD------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.      .++.+++++||++.++..
T Consensus       164 ~~~~l~~~~~~~i~v~~v~Pg~i~t~~~  191 (252)
T PRK06077        164 LTKYLALELAPKIRVNAIAPGFVKTKLG  191 (252)
T ss_pred             HHHHHHHHHhcCCEEEEEeeCCccChHH
Confidence            7753      378999999999988753

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.78  E-value=2.2e-18  Score=148.72  Aligned_cols=153  Identities=15%  Similarity=0.062  Sum_probs=117.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHh-------cCccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATL-------VGVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~-------~~~d~  151 (269)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.++..+...+  ..+.++++|++|.+++.+++       .++|+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5678999999999999999999999999999999986544332222  24778999999998887766       36899


Q ss_pred             EEEcCCCCC----------------CccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCCC--CCCCCcHHHHHHHH
Q 024290          152 VIDCATGRP----------------EEPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (269)
Q Consensus       152 vi~~ag~~~----------------~~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~~--~~~~~~y~~sK~~~  210 (269)
                      +|||+|...                ++..+++|+.++..+++++...   ..+++|++||....  ......|+.+|.++
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~  163 (263)
T PRK06200         84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKHAV  163 (263)
T ss_pred             EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHHHHHHH
Confidence            999999421                1234568888888877777532   23589999987642  33456799999999


Q ss_pred             HHHHHh------cCCCEEEEEcCcccccC
Q 024290          211 EQFLQD------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~~------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+++.      .+++++.|.||++..++
T Consensus       164 ~~~~~~la~el~~~Irvn~i~PG~i~t~~  192 (263)
T PRK06200        164 VGLVRQLAYELAPKIRVNGVAPGGTVTDL  192 (263)
T ss_pred             HHHHHHHHHHHhcCcEEEEEeCCccccCC
Confidence            987753      35999999999998775

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.78  E-value=1.6e-18  Score=147.95  Aligned_cols=153  Identities=15%  Similarity=0.056  Sum_probs=117.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC-CCCccc---ccc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR-PAPADF---LRD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +.+++++||||+|+||++++++|+++|++|+++.++. +...+.   +.+  .++.++.+|++|++++.++++       
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5678999999999999999999999999998766543 222221   111  247789999999998888774       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      .+|+||||+|...           ++..+++|+.++.++++++..    .+.++||++||...  ...+..+|+.+|.++
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  163 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGM  163 (247)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHH
Confidence            3799999999522           223456888998888888753    34569999999754  334567899999998


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccC
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+++.       .++++++++||.+.++.
T Consensus       164 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~  193 (247)
T PRK12935        164 LGFTKSLALELAKTNVTVNAICPGFIDTEM  193 (247)
T ss_pred             HHHHHHHHHHHHHcCcEEEEEEeCCCcChh
Confidence            877532       58999999999998764

>PRK07985 oxidoreductase; Provisional

Probab=99.78  E-value=7.3e-18  Score=148.22  Aligned_cols=155  Identities=17%  Similarity=0.152  Sum_probs=118.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC--Ccc---cccc--CCCEEEEcCCCCCCcHHHHh------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA--PAD---FLRD--WGATVVNADLSKPETIPATL------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~--~~~---~~~~--~~~~~i~~Dl~d~~~l~~~~------  146 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++..|+...  ..+   .+..  ..+.++.+|++|.+++.+++      
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999998775321  111   1111  13667899999998887665      


Q ss_pred             -cCccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHHHHH
Q 024290          147 -VGVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (269)
Q Consensus       147 -~~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~sK~~  209 (269)
                       .++|++|||+|...            ++..+++|+.++..+++++...  ..++||++||....  .....+|+.+|.+
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaa  205 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAA  205 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHH
Confidence             36899999998421            2345678999999999888653  22589999997653  2334679999999


Q ss_pred             HHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+++       ..|+++++|+||++++++.
T Consensus       206 l~~l~~~la~el~~~gIrvn~i~PG~v~t~~~  237 (294)
T PRK07985        206 ILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ  237 (294)
T ss_pred             HHHHHHHHHHHHhHhCcEEEEEECCcCccccc
Confidence            987764       2689999999999999863

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4.8e-18  Score=145.74  Aligned_cols=155  Identities=15%  Similarity=0.112  Sum_probs=120.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc--cccccCCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA--DFLRDWGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~--~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      ++.+|+++||||+|+||+++++.|+++|++|++++|+.+...  ..+....+.++.+|+++++++.++++       ++|
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   91 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRID   91 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            367899999999999999999999999999999999754211  11112246688999999998877763       579


Q ss_pred             EEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      +||||+|....           +..+++|+.+..++++++..    .+.++||++||...  +......|+.+|.+++.+
T Consensus        92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  171 (255)
T PRK06841         92 ILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGM  171 (255)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHH
Confidence            99999995321           23456888998888887753    45679999999754  344556899999998877


Q ss_pred             HHh-------cCCCEEEEEcCcccccCc
Q 024290          214 LQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.       .|++++.|+||.+.+++.
T Consensus       172 ~~~la~e~~~~gi~v~~v~pg~v~t~~~  199 (255)
T PRK06841        172 TKVLALEWGPYGITVNAISPTVVLTELG  199 (255)
T ss_pred             HHHHHHHHHhhCeEEEEEEeCcCcCccc
Confidence            642       589999999999988753

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.7e-18  Score=147.85  Aligned_cols=154  Identities=15%  Similarity=0.133  Sum_probs=118.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c--CCCEEEEcCCCCCCcHHHHh-------cC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D--WGATVVNADLSKPETIPATL-------VG  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~-------~~  148 (269)
                      +.+|+++||||+|+||+++++.|+++|++|++++|++++..+...   .  .++.++++|++|.+++.+++       .+
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            567999999999999999999999999999999987654332211   1  24788999999999888776       36


Q ss_pred             ccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCCC--CCCCCcHHHHHHHHH
Q 024290          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (269)
Q Consensus       149 ~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e  211 (269)
                      +|+||||+|....           +..++.|+.++.++++++.+    .+.++||++||....  ......|+.+|.+.+
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~  164 (250)
T PRK12939         85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVI  164 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHH
Confidence            8999999995321           22345788888888877643    345699999996542  333457999999999


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccCc
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.       .+++++.++||.+.++..
T Consensus       165 ~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~  194 (250)
T PRK12939        165 GMTRSLARELGGRGITVNAIAPGLTATEAT  194 (250)
T ss_pred             HHHHHHHHHHhhhCEEEEEEEECCCCCccc
Confidence            87643       589999999999987754

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.9e-18  Score=148.13  Aligned_cols=154  Identities=16%  Similarity=0.105  Sum_probs=115.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC-CCCCCccc---ccc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R-~~~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +++|+++||||+|+||+++++.|+++|++|++..+ +.+...+.   +..  ..+..+.+|+++.+++..+++       
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            45789999999999999999999999999988754 33322211   111  235678899999877654431       


Q ss_pred             ------CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHH
Q 024290          148 ------GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEI  206 (269)
Q Consensus       148 ------~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~s  206 (269)
                            ++|+||||||...           ++..+++|+.++..+++++.+.  ..++||++||....  .....+|+.+
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMT  161 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHHH
Confidence                  6899999999421           2344568999999888877553  23599999998653  3345689999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      |++++.+++.       .|++++++.||++.+++.
T Consensus       162 Kaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~  196 (252)
T PRK12747        162 KGAINTMTFTLAKQLGARGITVNAILPGFIKTDMN  196 (252)
T ss_pred             HHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchh
Confidence            9999987643       689999999999988854

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.78  E-value=3.8e-18  Score=145.60  Aligned_cols=154  Identities=12%  Similarity=0.135  Sum_probs=114.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC-CCCCccccc---c--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP-RPAPADFLR---D--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      |++|+++||||+|+||++++++|+++|++|++..+. .....+.+.   .  ..+..+.+|+.|.+++.++++       
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            456899999999999999999999999999886543 222211111   1  135677899999988877663       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++|+||||+|...           ++..+++|+.++..+.++    +++.+.++||++||...  +.....+|+.+|.++
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~  160 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGI  160 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHH
Confidence            6899999998532           234456888886665544    45567789999998754  334556799999988


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.+.       .+++++.++||++.++..
T Consensus       161 ~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~  191 (246)
T PRK12938        161 HGFTMSLAQEVATKGVTVNTVSPGYIGTDMV  191 (246)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEecccCCchh
Confidence            876532       689999999999998754

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3e-18  Score=147.23  Aligned_cols=151  Identities=19%  Similarity=0.134  Sum_probs=116.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---ccCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RDWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      +++++||||+|+||+++++.|+++|++|++++|+++...+..   ...+++++++|+.|.+++.++++       ++|+|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            578999999999999999999999999999999765433222   22357889999999998877764       58999


Q ss_pred             EEcCCCCCC-----------ccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC-CCCCCcHHHHHHHHHHHHHh
Q 024290          153 IDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD-KHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       153 i~~ag~~~~-----------~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~-~~~~~~y~~sK~~~e~~~~~  216 (269)
                      ||++|....           .....+|+.+..++++++    ++.+.++||++||.... ......|+.+|.+++.+++.
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~y~~sK~a~~~~~~~  161 (257)
T PRK07074         82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAALGHPAYSAAKAGLIHYTKL  161 (257)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCCCCcccHHHHHHHHHHHHH
Confidence            999985321           122347888887777776    44566799999986432 22345799999999877643


Q ss_pred             -------cCCCEEEEEcCcccccC
Q 024290          217 -------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       217 -------~gi~~~ilrp~~i~g~~  233 (269)
                             .|+++++++||+++++.
T Consensus       162 ~a~~~~~~gi~v~~v~pg~v~t~~  185 (257)
T PRK07074        162 LAVEYGRFGIRANAVAPGTVKTQA  185 (257)
T ss_pred             HHHHHhHhCeEEEEEEeCcCCcch
Confidence                   57999999999998875

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.4e-18  Score=155.03  Aligned_cols=155  Identities=12%  Similarity=0.080  Sum_probs=118.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---cC--CCEEEEcCCCCCCcHHHHh-------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---DW--GATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~~--~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      .+.+|+++||||+|+||+++++.|+++|++|++++|+.+...+...   ..  .+.++.+|++|.+++++++       .
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            3667899999999999999999999999999999998655433221   22  3567899999999888776       4


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~  210 (269)
                      ++|++|||||...           ++..+++|+.++.++.+++    ++.+.++||++||....  ......|+.+|.++
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal  163 (330)
T PRK06139         84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGL  163 (330)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHH
Confidence            6899999999421           1235678888887766655    45556799999987542  23346799999987


Q ss_pred             HHHHHh--------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD--------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~--------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.+.        .+++++.+.||.+.+++.
T Consensus       164 ~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~  195 (330)
T PRK06139        164 RGFSEALRGELADHPDIHVCDVYPAFMDTPGF  195 (330)
T ss_pred             HHHHHHHHHHhCCCCCeEEEEEecCCccCccc
Confidence            766532        379999999999988754

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3.5e-18  Score=147.38  Aligned_cols=152  Identities=17%  Similarity=0.154  Sum_probs=117.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c--cCCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R--DWGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      +++++||||+|+||+++++.|+++|++|++++|+.++..+..   .  ..++.++.+|+.|.+.+.++++       ++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999999754432211   1  1246788999999998887764       689


Q ss_pred             EEEEcCCCCCC------------ccchhhcHHHHHHHHHHHHH---cCCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRPE------------EPIKKVDWEGKVALIQCAKA---MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~~------------~~~~~~n~~~~~~li~a~~~---~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      +||||+|....            ...+++|+.++.++++.+.+   .+.+++|++||...  +..+...|+.+|.+++.+
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~  160 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGF  160 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHHH
Confidence            99999984221            12366889999999888753   23478999998754  334457899999999887


Q ss_pred             HHh-------cCCCEEEEEcCcccccCc
Q 024290          214 LQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.       .++++++++||.+.+++.
T Consensus       161 ~~~l~~~~~~~~i~~~~i~pg~v~t~~~  188 (263)
T PRK06181        161 FDSLRIELADDGVAVTVVCPGFVATDIR  188 (263)
T ss_pred             HHHHHHHhhhcCceEEEEecCccccCcc
Confidence            642       689999999999988754

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2e-18  Score=153.11  Aligned_cols=155  Identities=19%  Similarity=0.096  Sum_probs=117.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHh------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATL------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~------  146 (269)
                      .+++|+++||||+++||.+++++|+++|++|++++|+.++..+...       ...+.++.+|+.|.+++.+++      
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~   90 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE   90 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4778999999999999999999999999999999998654332221       124788999999999888775      


Q ss_pred             -cCccEEEEcCCCCC----------CccchhhcHHHHHHHHHHHHH---cCCCeEEEecccCCCC--------------C
Q 024290          147 -VGVHTVIDCATGRP----------EEPIKKVDWEGKVALIQCAKA---MGIQKYVFYSIHNCDK--------------H  198 (269)
Q Consensus       147 -~~~d~vi~~ag~~~----------~~~~~~~n~~~~~~li~a~~~---~~v~r~V~~SS~~~~~--------------~  198 (269)
                       .++|++|||||...          .+..+++|+.+...+.+.+..   .+..+||++||.....              .
T Consensus        91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~  170 (313)
T PRK05854         91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYA  170 (313)
T ss_pred             CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCc
Confidence             35899999999421          223567899987776666542   2346899999875311              2


Q ss_pred             CCCcHHHHHHHHHHHHHh---------cCCCEEEEEcCcccccCc
Q 024290          199 PEVPLMEIKYCTEQFLQD---------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       199 ~~~~y~~sK~~~e~~~~~---------~gi~~~ilrp~~i~g~~~  234 (269)
                      +...|+.+|.+.+.+.++         .|+.++.+.||.+.+++.
T Consensus       171 ~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~  215 (313)
T PRK05854        171 GMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL  215 (313)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence            335699999998876532         469999999999987653

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.6e-18  Score=147.22  Aligned_cols=154  Identities=13%  Similarity=0.085  Sum_probs=111.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.....+.........+.+|++|.+++.+.++++|++|||||..
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~   90 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGIN   90 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence            47789999999999999999999999999999999975221111111123578899999999999999999999999852


Q ss_pred             C--------CccchhhcHHHHHHHHHHHHHc-------CCCeEEEecccCC-CCCCCCcHHHHHHHHHHHH---H-----
Q 024290          160 P--------EEPIKKVDWEGKVALIQCAKAM-------GIQKYVFYSIHNC-DKHPEVPLMEIKYCTEQFL---Q-----  215 (269)
Q Consensus       160 ~--------~~~~~~~n~~~~~~li~a~~~~-------~v~r~V~~SS~~~-~~~~~~~y~~sK~~~e~~~---~-----  215 (269)
                      .        ++..+++|+.++.++++++...       +.+.++..||.+. .......|+.+|.+++.+.   +     
T Consensus        91 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~~~~~Y~aSKaal~~~~~l~~~l~~e  170 (245)
T PRK12367         91 PGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPALSPSYEISKRLIGQLVSLKKNLLDK  170 (245)
T ss_pred             CcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCCCCchhHHHHHHHHHHHHHHHHHHHh
Confidence            1        2345678999999888876432       1223433344332 2223456999999975432   1     


Q ss_pred             --hcCCCEEEEEcCcccccC
Q 024290          216 --DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 --~~gi~~~ilrp~~i~g~~  233 (269)
                        ..++.++.+.||.+.+++
T Consensus       171 ~~~~~i~v~~~~pg~~~t~~  190 (245)
T PRK12367        171 NERKKLIIRKLILGPFRSEL  190 (245)
T ss_pred             hcccccEEEEecCCCccccc
Confidence              368889999999886554

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.77  E-value=6e-18  Score=143.92  Aligned_cols=153  Identities=17%  Similarity=0.137  Sum_probs=116.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc-c---ccc--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-D---FLR--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~-~---~~~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +.+|+++||||+|+||+++++.|+++|++|+++.|+..... +   .+.  ...+.++.+|+.|.+++.++++       
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            56789999999999999999999999999988888654311 1   111  2256788999999998877764       


Q ss_pred             CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++|+|||++|....           +..+.+|+.++.++++++.+    .+.++||++||...  +......|+.+|.+.
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~  162 (248)
T PRK05557         83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGV  162 (248)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHH
Confidence            68999999984321           22345788888888877754    35678999998743  234467799999998


Q ss_pred             HHHHH-------hcCCCEEEEEcCcccccC
Q 024290          211 EQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +.+++       ..++++++++||.+.++.
T Consensus       163 ~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~  192 (248)
T PRK05557        163 IGFTKSLARELASRGITVNAVAPGFIETDM  192 (248)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEecCccCCcc
Confidence            87654       358999999999987654

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.9e-18  Score=148.05  Aligned_cols=154  Identities=13%  Similarity=0.027  Sum_probs=116.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHh------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATL------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~------  146 (269)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.++..+...       ...+..+.+|++|.+++.+++      
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4778999999999999999999999999999999998654432211       124667899999998887765      


Q ss_pred             -cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCCC--CCCCCcHHHHHH
Q 024290          147 -VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (269)
Q Consensus       147 -~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~  208 (269)
                       .++|+||||||...           +...+++|+.+...++++    +++.+.++||++||....  ......|+.+|.
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKa  164 (265)
T PRK07062         85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARA  164 (265)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHH
Confidence             35899999999432           223445677665555544    455556799999997652  233467999999


Q ss_pred             HHHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          209 CTEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       209 ~~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +++.+.+       ..|++++.++||++.++.
T Consensus       165 al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  196 (265)
T PRK07062        165 GLLNLVKSLATELAPKGVRVNSILLGLVESGQ  196 (265)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccccch
Confidence            9887664       368999999999998764

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.4e-18  Score=143.21  Aligned_cols=150  Identities=17%  Similarity=0.125  Sum_probs=112.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-cCCCEEEEcCCCCCCcHHHHhc---CccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPATLV---GVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~~~~~i~~Dl~d~~~l~~~~~---~~d~vi~~ag  157 (269)
                      ++|+++||||+|+||+++++.|+++ ++|++++|+.++..+... ..+++++++|++|.+++.++++   ++|+|||++|
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   80 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG   80 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            4679999999999999999999999 999999998654322211 1257899999999999988886   5899999998


Q ss_pred             CCCC-----------ccchhhcHHHHH----HHHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHHh----
Q 024290          158 GRPE-----------EPIKKVDWEGKV----ALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQD----  216 (269)
Q Consensus       158 ~~~~-----------~~~~~~n~~~~~----~li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~~----  216 (269)
                      ....           ...+++|+.+..    ++++++++. .+++|++||...  ...+..+|+.+|.+.+.+++.    
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~~~~  159 (227)
T PRK08219         81 VADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRALADALREE  159 (227)
T ss_pred             cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHHHHH
Confidence            5322           123456777744    444445544 468999998754  334457899999998877643    


Q ss_pred             -cC-CCEEEEEcCcccccC
Q 024290          217 -SG-LPHVIIRLWPYWAIC  233 (269)
Q Consensus       217 -~g-i~~~ilrp~~i~g~~  233 (269)
                       .+ ++++.++||.+.++.
T Consensus       160 ~~~~i~~~~i~pg~~~~~~  178 (227)
T PRK08219        160 EPGNVRVTSVHPGRTDTDM  178 (227)
T ss_pred             hcCCceEEEEecCCccchH
Confidence             34 899999999877653

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.1e-18  Score=152.46  Aligned_cols=155  Identities=15%  Similarity=0.124  Sum_probs=117.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c--CCCEEEEcCCCCCCcHHHHh-------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D--WGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      .+.+++|+||||+|+||+++++.|+++|++|++++|+.++..+...   .  ..+.++.+|++|.+++++++       .
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            4677899999999999999999999999999999998654332221   1  24678899999999888775       3


Q ss_pred             CccEEEEcCCCCCC-----------ccchhhcHHHHHH----HHHHHHHcCCCeEEEecccCCC--CCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~----li~a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~  210 (269)
                      ++|++|||+|....           +..+++|+.+..+    +++.+++.+.++||++||....  .....+|+.+|.++
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~  164 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAI  164 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHH
Confidence            68999999994321           2345677666554    5555566666899999998653  23446799999998


Q ss_pred             HHHHHh---------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD---------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~---------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.+.         .++++++|+||.+.+++.
T Consensus       165 ~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~  197 (334)
T PRK07109        165 RGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQF  197 (334)
T ss_pred             HHHHHHHHHHHhhcCCCeEEEEEeCCCccCchh
Confidence            876532         469999999999988753

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=4.3e-18  Score=144.32  Aligned_cols=151  Identities=13%  Similarity=0.050  Sum_probs=116.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCC-CcHHHHhcCccEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP-ETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~-~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.....    ..++.++.+|++++ +++.+.+.++|+||||+|.
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~   77 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI   77 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence            366789999999999999999999999999999999754321    22577889999987 4444445679999999984


Q ss_pred             CC------------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHHh----
Q 024290          159 RP------------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQD----  216 (269)
Q Consensus       159 ~~------------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~~----  216 (269)
                      ..            ++..+++|+.++.++++++.    +.+.++||++||...  +......|+.+|.+++.+.+.    
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~  157 (235)
T PRK06550         78 LDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALD  157 (235)
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHH
Confidence            21            12345688889888888774    344568999998754  233456899999998877642    


Q ss_pred             ---cCCCEEEEEcCcccccCc
Q 024290          217 ---SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 ---~gi~~~ilrp~~i~g~~~  234 (269)
                         .|+++++++||++.++..
T Consensus       158 ~~~~gi~v~~v~pg~v~t~~~  178 (235)
T PRK06550        158 YAKDGIQVFGIAPGAVKTPMT  178 (235)
T ss_pred             hhhcCeEEEEEeeCCccCccc
Confidence               589999999999988753

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.77  E-value=5.9e-18  Score=148.51  Aligned_cols=154  Identities=12%  Similarity=0.111  Sum_probs=119.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc----cccc--CCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~----~~~~--~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.+...+    .++.  ..+.++.+|++|.+.+.++++      
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999999999987543211    1111  246788999999988877763      


Q ss_pred             -CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHHHHHH
Q 024290          148 -GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (269)
Q Consensus       148 -~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~sK~~~  210 (269)
                       ++|+||||||...            +...+++|+.++.++++++.+.  ..++||++||....  ......|+.+|.++
T Consensus       123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a~  202 (290)
T PRK06701        123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAI  202 (290)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHHH
Confidence             5899999998421            1234678999999999888653  23589999987652  33446799999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccC
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+++.       .|++++.|+||.++++.
T Consensus       203 ~~l~~~la~~~~~~gIrv~~i~pG~v~T~~  232 (290)
T PRK06701        203 HAFTRSLAQSLVQKGIRVNAVAPGPIWTPL  232 (290)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCCCCCcc
Confidence            887643       58999999999998874

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.77  E-value=3.6e-18  Score=144.00  Aligned_cols=153  Identities=18%  Similarity=0.269  Sum_probs=120.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc----ccccCCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~----~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      +..+++|+||||.||||+||++.|..+|++|++++.-.....+    +.....++.+.-|+..     .++..+|.|||+
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~-----pl~~evD~IyhL   98 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVE-----PLLKEVDQIYHL   98 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechh-----HHHHHhhhhhhh
Confidence            4556899999999999999999999999999999875433332    2334456666666654     477789999999


Q ss_pred             CCC-------CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCC------------------CCCcHHHHHHHH
Q 024290          156 ATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH------------------PEVPLMEIKYCT  210 (269)
Q Consensus       156 ag~-------~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~------------------~~~~y~~sK~~~  210 (269)
                      |+.       ..+-..+..|..++.+++..|++.+ +||++.||..++..                  +...|...|..+
T Consensus        99 Aapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~a  177 (350)
T KOG1429|consen   99 AAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVA  177 (350)
T ss_pred             ccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHH
Confidence            984       3345566789999999999999988 79999998765322                  223499999999


Q ss_pred             HHHH----HhcCCCEEEEEcCcccccCccccc
Q 024290          211 EQFL----QDSGLPHVIIRLWPYWAICSTYTR  238 (269)
Q Consensus       211 e~~~----~~~gi~~~ilrp~~i~g~~~~~~~  238 (269)
                      |.++    ++.|+++.|.|+.++|||...+..
T Consensus       178 E~L~~~y~k~~giE~rIaRifNtyGPrm~~~d  209 (350)
T KOG1429|consen  178 ETLCYAYHKQEGIEVRIARIFNTYGPRMHMDD  209 (350)
T ss_pred             HHHHHHhhcccCcEEEEEeeecccCCccccCC
Confidence            9887    457999999999999999765543

>PRK08017 oxidoreductase; Provisional

Probab=99.77  E-value=3.9e-18  Score=146.29  Aligned_cols=151  Identities=19%  Similarity=0.205  Sum_probs=116.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh--------cCccEEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL--------VGVHTVID  154 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~--------~~~d~vi~  154 (269)
                      +|+++||||+|+||.++++.|+++|++|++++|+.++... +.+.+++.+++|+.|.+++.+++        .++|.+||
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR-MNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH-HHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            3689999999999999999999999999999998655433 23346889999999988776654        34689999


Q ss_pred             cCCCCC-----------CccchhhcHHHHHHH----HHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH--
Q 024290          155 CATGRP-----------EEPIKKVDWEGKVAL----IQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ--  215 (269)
Q Consensus       155 ~ag~~~-----------~~~~~~~n~~~~~~l----i~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~--  215 (269)
                      ++|...           .+..+++|+.++.++    ++.+++.+.+++|++||...  +.....+|+.+|.++|.+.+  
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~l  160 (256)
T PRK08017         81 NAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDAL  160 (256)
T ss_pred             CCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHHH
Confidence            998432           123456777776664    66667778889999998643  33445679999999987653  


Q ss_pred             -----hcCCCEEEEEcCcccccCc
Q 024290          216 -----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 -----~~gi~~~ilrp~~i~g~~~  234 (269)
                           ..++++++++||.+.+++.
T Consensus       161 ~~~~~~~~i~v~~v~pg~~~t~~~  184 (256)
T PRK08017        161 RMELRHSGIKVSLIEPGPIRTRFT  184 (256)
T ss_pred             HHHHhhcCCEEEEEeCCCcccchh
Confidence                 4689999999999877643

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.77  E-value=3.5e-18  Score=146.81  Aligned_cols=154  Identities=12%  Similarity=0.059  Sum_probs=119.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---ccc--CCCEEEEcCCCCCCcHHHHh-------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      .+.+|+|+||||+|+||+++++.|+++|++|++++|+.+...+.   +..  ..+.++.+|++|.+++.+++       .
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            36789999999999999999999999999999999875543221   111  24677899999999887765       3


Q ss_pred             CccEEEEcCCCCC----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHH
Q 024290          148 GVHTVIDCATGRP----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (269)
Q Consensus       148 ~~d~vi~~ag~~~----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e  211 (269)
                      ++|+||||+|...          ++..+++|+.++.++++++.    +.+.++||++||....  ..+...|+.+|.+++
T Consensus        88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  167 (255)
T PRK06113         88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAAS  167 (255)
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHH
Confidence            5799999998421          12235688999988888875    3445699999997652  344567999999999


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccC
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .+++.       .+++++++.||.+.++.
T Consensus       168 ~~~~~la~~~~~~~i~v~~v~pg~~~t~~  196 (255)
T PRK06113        168 HLVRNMAFDLGEKNIRVNGIAPGAILTDA  196 (255)
T ss_pred             HHHHHHHHHhhhhCeEEEEEecccccccc
Confidence            87743       68999999999998764

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.77  E-value=7.7e-18  Score=145.98  Aligned_cols=152  Identities=13%  Similarity=0.079  Sum_probs=115.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc-------CccE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV-------GVHT  151 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------~~d~  151 (269)
                      |+|+||||+|+||+++++.|+++|++|++++|+.++..+...     ...+.++.+|+.|++++.++++       ++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            479999999999999999999999999999997654333221     1247788999999988877663       6899


Q ss_pred             EEEcCCCCCC-----------ccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 024290          152 VIDCATGRPE-----------EPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       152 vi~~ag~~~~-----------~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~  214 (269)
                      ||||+|....           +..+++|+.++..+.++    +++.+.++||++||...  +......|+.+|.+.+.+.
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~  160 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALS  160 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHH
Confidence            9999994321           22356787776665554    56667789999998754  3344568999999987664


Q ss_pred             H-------hcCCCEEEEEcCcccccCcc
Q 024290          215 Q-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       215 ~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +       ..|+++++++||.+.+++..
T Consensus       161 ~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  188 (270)
T PRK05650        161 ETLLVELADDEIGVHVVCPSFFQTNLLD  188 (270)
T ss_pred             HHHHHHhcccCcEEEEEecCccccCccc
Confidence            3       26899999999999887543

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.6e-18  Score=148.61  Aligned_cols=155  Identities=15%  Similarity=0.043  Sum_probs=118.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+.+|+++||||+|+||++++++|+++|++|++++|++++..+..   ..  ..+.++.+|++|.+++.++++       
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            366799999999999999999999999999999999865432221   11  247889999999988877664       


Q ss_pred             CccEEEEcCCCCC------------CccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 ~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      ++|+||||+|...            ++..+++|+.+...++++    +++.+.+++|++||...  +......|+.+|.+
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa  163 (253)
T PRK06172         84 RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHA  163 (253)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHH
Confidence            5699999998421            123456888887666554    34455679999998754  33445679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+.       .|++++.+.||.+.+++.
T Consensus       164 ~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~  195 (253)
T PRK06172        164 VIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMF  195 (253)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeCCccChhh
Confidence            9887643       579999999999977653

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.77  E-value=6.2e-18  Score=142.71  Aligned_cols=152  Identities=15%  Similarity=0.098  Sum_probs=115.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-----CccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-----GVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-----~~d~vi~~ag  157 (269)
                      ||+++||||+|+||+++++.|+++|++|++++|+++...+.....++.++.+|++|.+++.++++     ++|+||||+|
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            47899999999999999999999999999999987654332222367888999999988877764     5899999998


Q ss_pred             CCC-------------CccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCCCC-----CCCCcHHHHHHHHHHHHHh
Q 024290          158 GRP-------------EEPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCDK-----HPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       158 ~~~-------------~~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~~~-----~~~~~y~~sK~~~e~~~~~  216 (269)
                      ...             ....+.+|+.++..+.+++...   +..+++++||.....     .....|+.+|.+++.+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~  160 (225)
T PRK08177         81 ISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRS  160 (225)
T ss_pred             ccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHH
Confidence            421             1224457888888888877532   335788888854311     2334699999999988753


Q ss_pred             -------cCCCEEEEEcCcccccCc
Q 024290          217 -------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 -------~gi~~~ilrp~~i~g~~~  234 (269)
                             .+++++.++||++-++..
T Consensus       161 l~~e~~~~~i~v~~i~PG~i~t~~~  185 (225)
T PRK08177        161 FVAELGEPTLTVLSMHPGWVKTDMG  185 (225)
T ss_pred             HHHHhhcCCeEEEEEcCCceecCCC
Confidence                   579999999999987753

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=7.9e-18  Score=144.69  Aligned_cols=153  Identities=12%  Similarity=0.087  Sum_probs=116.8

Q ss_pred             CCCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---ccCCCEEEEcCCCCCCcHHHHh-------c
Q 024290           80 PVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RDWGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      .+++|+++||||+  ++||++++++|+++|++|++.+|+. +..+.+   ....+.++++|++|++++++++       .
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            3678999999999  7999999999999999999999863 222211   1235778999999999887765       3


Q ss_pred             CccEEEEcCCCCC---------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHHHH
Q 024290          148 GVHTVIDCATGRP---------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (269)
Q Consensus       148 ~~d~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~sK~  208 (269)
                      ++|++|||||...               ++..+++|+.+...+.+++...  ..+++|++||....  ......|+.+|.
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKa  162 (252)
T PRK06079         83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKA  162 (252)
T ss_pred             CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhHHHHH
Confidence            5899999998432               1234568888888777776543  12589999987653  233467999999


Q ss_pred             HHHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          209 CTEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       209 ~~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +++.+.+       ..|++++.|.||.+.+++
T Consensus       163 al~~l~~~la~el~~~gI~vn~i~PG~v~T~~  194 (252)
T PRK06079        163 ALESSVRYLARDLGKKGIRVNAISAGAVKTLA  194 (252)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence            9998764       368999999999998774

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.76  E-value=9e-18  Score=146.00  Aligned_cols=152  Identities=13%  Similarity=0.177  Sum_probs=116.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc----------ccc--CCCEEEEcCCCCCCcHHHHhc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----------LRD--WGATVVNADLSKPETIPATLV  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----------~~~--~~~~~i~~Dl~d~~~l~~~~~  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.+...+.          +..  .++.++.+|+++++++.++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            36678999999999999999999999999999999975432110          111  246788999999998887764


Q ss_pred             -------CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCCC--C--CCCC
Q 024290          148 -------GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--K--HPEV  201 (269)
Q Consensus       148 -------~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~~--~--~~~~  201 (269)
                             ++|+||||+|...           ++..+++|+.++.++++++..    .+.+++|++||....  .  .+..
T Consensus        83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~  162 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHT  162 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcc
Confidence                   6899999999422           133556899999998888853    334689999986432  1  3457


Q ss_pred             cHHHHHHHHHHHHHh-------cCCCEEEEEcCc-ccc
Q 024290          202 PLMEIKYCTEQFLQD-------SGLPHVIIRLWP-YWA  231 (269)
Q Consensus       202 ~y~~sK~~~e~~~~~-------~gi~~~ilrp~~-i~g  231 (269)
                      +|+.+|.++|.+++.       .+++++.+.|+. +..
T Consensus       163 ~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t  200 (273)
T PRK08278        163 AYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIAT  200 (273)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCcccc
Confidence            899999999987753       589999999994 444

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.76  E-value=5e-18  Score=144.94  Aligned_cols=152  Identities=14%  Similarity=0.087  Sum_probs=113.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Cccc---ccc--CCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADF---LRD--WGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      +++++||||+|+||++++++|+++|++|++..++.+. ..+.   +..  ..+.++.+|++|.+++.++++       ++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999998887654322 1111   111  246788999999998887764       68


Q ss_pred             cEEEEcCCCCCC------------ccchhhcHHHHHHHHHHHHHc----C---CCeEEEecccCC-CCCCC--CcHHHHH
Q 024290          150 HTVIDCATGRPE------------EPIKKVDWEGKVALIQCAKAM----G---IQKYVFYSIHNC-DKHPE--VPLMEIK  207 (269)
Q Consensus       150 d~vi~~ag~~~~------------~~~~~~n~~~~~~li~a~~~~----~---v~r~V~~SS~~~-~~~~~--~~y~~sK  207 (269)
                      |+||||+|....            +..+++|+.++.++++++.+.    +   -++||++||... ...+.  ..|+.+|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK  161 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence            999999985321            134668899988888777542    1   237999998754 22222  4699999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.+++.       .|++++++|||++++++.
T Consensus       162 aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~  195 (248)
T PRK06123        162 GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIH  195 (248)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCcccCchh
Confidence            999987642       489999999999999853

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.76  E-value=3.1e-18  Score=145.88  Aligned_cols=153  Identities=16%  Similarity=0.159  Sum_probs=117.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc----cccc--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLR--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~----~~~~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +++++++||||+|+||+++++.|+++|++|+++.|+.+...    +.+.  ...+.++.+|++|.+++.++++       
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            56789999999999999999999999999988887543211    1111  1246788999999998888774       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      ++|+||||+|...           ++..+++|+.++.++++++.+.  ..++||++||...  +..+...|+.+|.+++.
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~  162 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEG  162 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHHHH
Confidence            6899999999432           1234568889998888887653  2358999998754  33455789999999998


Q ss_pred             HHHh-------cCCCEEEEEcCcccccC
Q 024290          213 FLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       213 ~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +++.       .++++++++||.+.+++
T Consensus       163 ~~~~~a~~~~~~~i~v~~i~pg~~~t~~  190 (245)
T PRK12937        163 LVHVLANELRGRGITVNAVAPGPVATEL  190 (245)
T ss_pred             HHHHHHHHhhhcCeEEEEEEeCCccCch
Confidence            7753       58999999999987764

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.76  E-value=8.3e-18  Score=145.14  Aligned_cols=153  Identities=15%  Similarity=0.132  Sum_probs=117.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHh------cCcc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATL------VGVH  150 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~------~~~d  150 (269)
                      +++++++||||+|+||.++++.|+++|++|++++|+.+...+...    ..++.++.+|++|.+++.+++      .++|
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            567899999999999999999999999999999997654332221    125788999999998887765      3579


Q ss_pred             EEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      +||||+|....           +..+++|+.++.++++++.+    .+.+++|++||...  +......|+.+|.+++.+
T Consensus        83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  162 (263)
T PRK09072         83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGF  162 (263)
T ss_pred             EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHH
Confidence            99999985321           23456889998888877743    44568999988654  233456799999998776


Q ss_pred             HH-------hcCCCEEEEEcCcccccC
Q 024290          214 LQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       214 ~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      ++       ..+++++.+.||.+.++.
T Consensus       163 ~~~l~~~~~~~~i~v~~v~Pg~~~t~~  189 (263)
T PRK09072        163 SEALRRELADTGVRVLYLAPRATRTAM  189 (263)
T ss_pred             HHHHHHHhcccCcEEEEEecCcccccc
Confidence            53       268999999999997764

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.76  E-value=8.9e-18  Score=145.29  Aligned_cols=152  Identities=15%  Similarity=0.155  Sum_probs=117.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---ccc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++++++||||+|+||.++++.|+++|++|++++|+.+...+.   +..  .++.++.+|++|++++.++++       
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~   85 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG   85 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999999976543222   111  245778999999988887763       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      ++|+||||+|...           ++..+++|+.++.++++++...   ..++||++||...  .......|+.+|.+++
T Consensus        86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~asK~a~~  165 (264)
T PRK07576         86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVD  165 (264)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHHHHHHHH
Confidence            5799999997321           1234568999999988877542   2269999999754  2334567999999999


Q ss_pred             HHHHh-------cCCCEEEEEcCcccc
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWA  231 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g  231 (269)
                      .+++.       .|++++.++||.+.+
T Consensus       166 ~l~~~la~e~~~~gi~v~~v~pg~~~~  192 (264)
T PRK07576        166 MLTRTLALEWGPEGIRVNSIVPGPIAG  192 (264)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecccccC
Confidence            88753       579999999999864

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.76  E-value=5.3e-18  Score=146.20  Aligned_cols=154  Identities=18%  Similarity=0.127  Sum_probs=117.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc--cccc--cCCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA--DFLR--DWGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~--~~~~--~~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      +.+++++||||+|+||+++++.|+++|++|++++|+.....  +.+.  ...+.++.+|+++++++.++++       ++
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            56789999999999999999999999999999999753111  1111  1246788999999998887764       57


Q ss_pred             cEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC---CCCCCcHHHHHHHHH
Q 024290          150 HTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD---KHPEVPLMEIKYCTE  211 (269)
Q Consensus       150 d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~---~~~~~~y~~sK~~~e  211 (269)
                      |+||||+|...           ++..+++|+.++..+++++.    +.+.++||++||....   ......|+.+|.+++
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~  163 (263)
T PRK08226         84 DILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIV  163 (263)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHH
Confidence            99999999421           12245688888888887764    3455689999886542   234567999999998


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccCc
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.       .+++++.++||.+.++..
T Consensus       164 ~~~~~la~~~~~~~i~v~~i~pg~v~t~~~  193 (263)
T PRK08226        164 GLTKSLAVEYAQSGIRVNAICPGYVRTPMA  193 (263)
T ss_pred             HHHHHHHHHhcccCcEEEEEecCcccCHHH
Confidence            77643       489999999999988753

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.76  E-value=6.9e-18  Score=143.78  Aligned_cols=152  Identities=17%  Similarity=0.108  Sum_probs=111.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-eCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADFL---RD--WGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      |++++||||+|+||++++++|+++|++|+++ .|+.++..+..   ..  ..+.++.+|++|++++.++++       ++
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999875 45443322211   11  246788999999998888764       47


Q ss_pred             cEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHHc-------CCCeEEEecccCCC-CCC--CCcHHHHH
Q 024290          150 HTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKAM-------GIQKYVFYSIHNCD-KHP--EVPLMEIK  207 (269)
Q Consensus       150 d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~-------~v~r~V~~SS~~~~-~~~--~~~y~~sK  207 (269)
                      |+||||+|...            ++..+++|+.++..+++++...       +.++||++||.... ..+  ...|+.+|
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            89999999421            1234668888887776665432       13579999997542 222  25799999


Q ss_pred             HHHHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          208 YCTEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       208 ~~~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.+++       ..+++++++|||++++++.
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~  194 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMH  194 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCccc
Confidence            99987764       2589999999999999864

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.75  E-value=8.4e-18  Score=144.64  Aligned_cols=154  Identities=15%  Similarity=0.106  Sum_probs=114.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc----c---cc--cCCCEEEEcCCCCCCcHHHHhc---
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----F---LR--DWGATVVNADLSKPETIPATLV---  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~----~---~~--~~~~~~i~~Dl~d~~~l~~~~~---  147 (269)
                      .+++|+++||||+|+||.++++.|+++|++|+++.++.+...+    .   +.  ...+.++++|++|++++.++++   
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK   84 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999998887765332111    1   11  1246788999999999887763   


Q ss_pred             ----CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEe-ccc-CCCCCCCCcHHHHHH
Q 024290          148 ----GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFY-SIH-NCDKHPEVPLMEIKY  208 (269)
Q Consensus       148 ----~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~-SS~-~~~~~~~~~y~~sK~  208 (269)
                          ++|++|||||...           ++..+++|+.++..+++++...  ..++++++ ||. +........|+.+|.
T Consensus        85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~Y~~sK~  164 (257)
T PRK12744         85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGSKA  164 (257)
T ss_pred             HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCcccchhhHH
Confidence                6899999999421           2234568999998888888653  12466665 443 334445578999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      ++|.+++.       .|+++++++||.+.+++
T Consensus       165 a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~  196 (257)
T PRK12744        165 PVEHFTRAASKEFGARGISVTAVGPGPMDTPF  196 (257)
T ss_pred             HHHHHHHHHHHHhCcCceEEEEEecCccccch
Confidence            99988753       47999999999998774

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.75  E-value=9.1e-18  Score=144.22  Aligned_cols=155  Identities=14%  Similarity=0.056  Sum_probs=117.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Ccccccc--CCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFLRD--WGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      .+.+|+++|||++|+||++++++|+++|++|+++++.... ..+.+..  ..+..+++|++|.+++.++++       ++
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   86 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI   86 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5778999999999999999999999999999988775321 1111211  246788999999988887764       58


Q ss_pred             cEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cC-CCeEEEecccCCC--CCCCCcHHHHHHHHH
Q 024290          150 HTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (269)
Q Consensus       150 d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~-v~r~V~~SS~~~~--~~~~~~y~~sK~~~e  211 (269)
                      |++|||||...           ++..+++|+.++.++++++..    .+ -+++|++||....  ......|+.+|.+++
T Consensus        87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  166 (253)
T PRK08993         87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVM  166 (253)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHH
Confidence            99999998421           334567899998888777643    22 2589999987542  233468999999998


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccCc
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.+.       .|++++.++||++.++..
T Consensus       167 ~~~~~la~e~~~~gi~v~~v~pG~v~T~~~  196 (253)
T PRK08993        167 GVTRLMANEWAKHNINVNAIAPGYMATNNT  196 (253)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCcccCcch
Confidence            87642       689999999999988754

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=9.3e-18  Score=142.40  Aligned_cols=153  Identities=14%  Similarity=0.084  Sum_probs=114.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHh-------cCc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATL-------VGV  149 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~-------~~~  149 (269)
                      +++++|+||||+|+||.++++.|+++|++|++++|++++......    ..++.++++|++|.+++.+++       .++
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            567899999999999999999999999999999998654332211    125788999999998887765       347


Q ss_pred             cEEEEcCCCCCC---------ccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC---CCCCCCcHHHHHHHHHHHHH
Q 024290          150 HTVIDCATGRPE---------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC---DKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       150 d~vi~~ag~~~~---------~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~---~~~~~~~y~~sK~~~e~~~~  215 (269)
                      |.+||+++....         +..+++|+.+...+++.+.+.  ..++||++||...   ...+...|+.+|.+.+.+++
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~  162 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVE  162 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHHHHHHH
Confidence            999999984321         223456777777666666442  2258999998754   22344569999998876553


Q ss_pred             -------hcCCCEEEEEcCcccccC
Q 024290          216 -------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 -------~~gi~~~ilrp~~i~g~~  233 (269)
                             ..+++++++||++++++.
T Consensus       163 ~~~~~~~~~gi~v~~i~pg~v~~~~  187 (238)
T PRK05786        163 ILASELLGRGIRVNGIAPTTISGDF  187 (238)
T ss_pred             HHHHHHhhcCeEEEEEecCccCCCC
Confidence                   358999999999999875

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.75  E-value=6.5e-18  Score=143.79  Aligned_cols=152  Identities=16%  Similarity=0.133  Sum_probs=115.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Cccccc-----cCCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFLR-----DWGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      +|+++||||+|+||+++++.|+++|++|++++|+... ..+...     ...+.++.+|++|.+++.++++       ++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999997431 111111     1247889999999988877663       58


Q ss_pred             cEEEEcCCCCC-----------CccchhhcHHHHHHHHH----HHHHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHH
Q 024290          150 HTVIDCATGRP-----------EEPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       150 d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~----a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~  212 (269)
                      |+||||+|...           ++..+++|+.+..++.+    .+++.+.++||++||....  ......|..+|.+++.
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG  161 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            99999998432           12345578888777644    4466677899999987642  3345679999998887


Q ss_pred             HHH-------hcCCCEEEEEcCcccccCc
Q 024290          213 FLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      +++       ..++++++++||++.++..
T Consensus       162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~  190 (245)
T PRK12824        162 FTKALASEGARYGITVNCIAPGYIATPMV  190 (245)
T ss_pred             HHHHHHHHHHHhCeEEEEEEEcccCCcch
Confidence            654       3589999999999988754

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.75  E-value=2.2e-17  Score=142.44  Aligned_cols=154  Identities=14%  Similarity=0.073  Sum_probs=112.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Cccc---cc---cCCCEEEEcCCCCCCcHHHHhc-----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADF---LR---DWGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~---~~---~~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      .+++|+++||||+++||+++++.|+++|++|+++.|+.++ ....   ++   ...+.++.+|++|++++.++++     
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4788999999999999999999999999999988764322 2111   11   1246789999999998877763     


Q ss_pred             --CccEEEEcCCCCC------C-----------ccchhhcHHHHHHHHH----HHHHcCCCeEEEecccCC--CCCCCCc
Q 024290          148 --GVHTVIDCATGRP------E-----------EPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNC--DKHPEVP  202 (269)
Q Consensus       148 --~~d~vi~~ag~~~------~-----------~~~~~~n~~~~~~li~----a~~~~~v~r~V~~SS~~~--~~~~~~~  202 (269)
                        ++|++|||||...      .           ...+++|+.+...+.+    .+++.+.++||++||...  .......
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  164 (260)
T PRK08416         85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAG  164 (260)
T ss_pred             cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCccc
Confidence              5899999997321      1           1233456555444443    444445569999999764  2344567


Q ss_pred             HHHHHHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          203 LMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       203 y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      |+.+|.+++.+++.       .|++++.|.||.+.++.
T Consensus       165 Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~  202 (260)
T PRK08416        165 HGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDA  202 (260)
T ss_pred             chhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChh
Confidence            99999999987643       58999999999997764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=9.4e-18  Score=144.24  Aligned_cols=154  Identities=16%  Similarity=0.136  Sum_probs=116.6

Q ss_pred             CCCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCCC-----------CCc---cccc--cCCCEEEEcCCCCCCc
Q 024290           80 PVRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRP-----------APA---DFLR--DWGATVVNADLSKPET  141 (269)
Q Consensus        80 ~~~~~~vlVtGatG--~iG~~l~~~Ll~~G~~V~~~~R~~~-----------~~~---~~~~--~~~~~~i~~Dl~d~~~  141 (269)
                      ++++|+++||||+|  +||.++++.|+++|++|++++|++.           ...   +.+.  ...+.++.+|++|.++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            46778999999995  7999999999999999999998721           110   1111  1247889999999988


Q ss_pred             HHHHh-------cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc----CCCeEEEecccCCC--C
Q 024290          142 IPATL-------VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCD--K  197 (269)
Q Consensus       142 l~~~~-------~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~----~v~r~V~~SS~~~~--~  197 (269)
                      +.+++       .++|+||||+|...           ++..+++|+.++..+++++...    +.++||++||....  .
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~  161 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM  161 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC
Confidence            77765       35799999998421           1233568999999988887542    44689999997542  2


Q ss_pred             CCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          198 HPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       198 ~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .....|+.+|.+++.+++.       .+++++.++||.+.+++
T Consensus       162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~  204 (256)
T PRK12748        162 PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGW  204 (256)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCC
Confidence            3456799999999987643       58999999999987764

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.8e-17  Score=139.76  Aligned_cols=155  Identities=14%  Similarity=0.057  Sum_probs=114.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCCCCC--CcHHHHh-----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKP--ETIPATL-----  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl~d~--~~l~~~~-----  146 (269)
                      .|++|+++||||+|+||+++++.|+++|++|++++|++++..+...      ...+.++.+|+.+.  +++.+++     
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            3677899999999999999999999999999999998754332211      12356788999763  3444433     


Q ss_pred             ---cCccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHH
Q 024290          147 ---VGVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLME  205 (269)
Q Consensus       147 ---~~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~  205 (269)
                         .++|+||||+|...            +...+++|+.++.++++++.    +.+.+++|++||....  ......|+.
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~  162 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGA  162 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHH
Confidence               46899999999421            11245788998887777764    3455799999986542  223357999


Q ss_pred             HHHHHHHHHHh-------c-CCCEEEEEcCcccccCc
Q 024290          206 IKYCTEQFLQD-------S-GLPHVIIRLWPYWAICS  234 (269)
Q Consensus       206 sK~~~e~~~~~-------~-gi~~~ilrp~~i~g~~~  234 (269)
                      +|.+++.+++.       . ++++++++||+++++..
T Consensus       163 sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~  199 (239)
T PRK08703        163 SKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQR  199 (239)
T ss_pred             hHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccc
Confidence            99999987643       2 69999999999999853

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.9e-17  Score=142.07  Aligned_cols=149  Identities=14%  Similarity=0.143  Sum_probs=115.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c--cCCCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R--DWGATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      +|+++||||+|+||+++++.|+++|++|++++|+.+...+..   .  ...+.++++|++|++++.+++       .++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            478999999999999999999999999999999865433221   1  124778999999998887766       3689


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cC-CCeEEEecccCCC--CCCCCcHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~-v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~  212 (269)
                      +||||+|...           ++..+++|+.++.++++++.+    .+ .++||++||....  .....+|+.+|.+++.
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~  160 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA  160 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHH
Confidence            9999998421           233567899999998888843    22 3589999987653  2344679999999988


Q ss_pred             HHHh--------cCCCEEEEEcCcccc
Q 024290          213 FLQD--------SGLPHVIIRLWPYWA  231 (269)
Q Consensus       213 ~~~~--------~gi~~~ilrp~~i~g  231 (269)
                      +.+.        .|++++.++||.+.+
T Consensus       161 ~~~~la~e~~~~~gi~v~~v~PG~v~~  187 (252)
T PRK07677        161 MTRTLAVEWGRKYGIRVNAIAPGPIER  187 (252)
T ss_pred             HHHHHHHHhCcccCeEEEEEeeccccc
Confidence            7652        489999999999985

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2.6e-17  Score=141.61  Aligned_cols=153  Identities=16%  Similarity=0.130  Sum_probs=113.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Cccc---cc--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADF---LR--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~---~~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .++|+++||||+|+||+++++.|+++|++|+++.++... ....   +.  ...+.++.+|++|.+++.++++       
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            346799999999999999999999999999988775322 1111   11  1246789999999998887763       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc----CCCeEEEecccCC-CCCC-CCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNC-DKHP-EVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~----~v~r~V~~SS~~~-~~~~-~~~y~~sK~~~  210 (269)
                      ++|+||||+|...           ++..+++|+.++.++++++...    +.+++|+++|... ...+ ..+|+.+|.++
T Consensus        87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~  166 (258)
T PRK09134         87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAAL  166 (258)
T ss_pred             CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHH
Confidence            4799999998422           2345678999999888887543    3458888887543 2223 35799999999


Q ss_pred             HHHHHh------cCCCEEEEEcCcccccC
Q 024290          211 EQFLQD------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~~------~gi~~~ilrp~~i~g~~  233 (269)
                      |.+.+.      .+++++.++||.++...
T Consensus       167 ~~~~~~la~~~~~~i~v~~i~PG~v~t~~  195 (258)
T PRK09134        167 WTATRTLAQALAPRIRVNAIGPGPTLPSG  195 (258)
T ss_pred             HHHHHHHHHHhcCCcEEEEeecccccCCc
Confidence            877643      24899999999987643

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.1e-17  Score=144.28  Aligned_cols=155  Identities=16%  Similarity=0.057  Sum_probs=118.1

Q ss_pred             CCCCCEEEEECCCc-HHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHhc----
Q 024290           80 PVRPTSILVVGATG-TLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATLV----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG-~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~~----  147 (269)
                      .+.+|+++||||+| +||+++++.|+++|++|++++|+.++..+..+       ...+.++++|+++++++.++++    
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            36679999999997 79999999999999999999987654332211       1246788999999988877663    


Q ss_pred             ---CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcC-CCeEEEecccCC--CCCCCCcHHHH
Q 024290          148 ---GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       148 ---~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~-v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                         ++|+||||+|...           +...+++|+.+...+++++.    +.+ .++||++||...  ...+...|+.+
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s  173 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAA  173 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHH
Confidence               6899999999422           22345678888887777664    333 468999988653  33456679999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      |.+++.+++.       .|+++++|+||.+++++.
T Consensus       174 Kaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~  208 (262)
T PRK07831        174 KAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFL  208 (262)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccc
Confidence            9999988652       689999999999998753

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.74  E-value=2.7e-17  Score=142.24  Aligned_cols=150  Identities=29%  Similarity=0.351  Sum_probs=121.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCCcc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~  163 (269)
                      ++|+||||||++|++++++|+++|++|+++.|+++......  .++++..+|+.+++.+...++|+|.++++.+....+.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~   78 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSD   78 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--CCcEEEEeccCCHhHHHHHhccccEEEEEeccccccc
Confidence            47999999999999999999999999999999877665544  6899999999999999999999999999988443222


Q ss_pred             -chhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEEEEEcCcccccCccc
Q 024290          164 -IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       164 -~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g~~~~~  236 (269)
                       ..........+..+++. .++++++++|..+........|..+|...|+.+++.|++++++|+..+|.+....
T Consensus        79 ~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~~  151 (275)
T COG0702          79 AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADAASPSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAA  151 (275)
T ss_pred             chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCCCCccHHHHHHHHHHHHHHhcCCCeEEEecCeeeeccchh
Confidence             23333333344444333 4578999999998877788899999999999999999999999977777665443

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3e-17  Score=142.49  Aligned_cols=151  Identities=14%  Similarity=0.055  Sum_probs=114.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c---CCCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D---WGATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~---~~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      |+++||||+|+||.++++.|+++|++|++++|+.+...+...   .   ....++.+|++|++++.+++       .++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            479999999999999999999999999999997654322211   1   12455789999988877665       3589


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----c-CCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----M-GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~-~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      +||||+|...           ++..+++|+.++..+++++..    . ..++||++||...  +.....+|+.+|.+++.
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  160 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRG  160 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHH
Confidence            9999998432           133567899999998888642    2 2468999998754  23345679999998876


Q ss_pred             HHH-------hcCCCEEEEEcCcccccCc
Q 024290          213 FLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+       ..++++++++||.+.++..
T Consensus       161 ~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~  189 (272)
T PRK07832        161 LSEVLRFDLARHGIGVSVVVPGAVKTPLV  189 (272)
T ss_pred             HHHHHHHHhhhcCcEEEEEecCcccCcch
Confidence            653       3789999999999998753

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=2.5e-17  Score=143.16  Aligned_cols=153  Identities=10%  Similarity=0.064  Sum_probs=114.4

Q ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCCCCC---ccccccCC-CEEEEcCCCCCCcHHHHh-------c
Q 024290           81 VRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAP---ADFLRDWG-ATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        81 ~~~~~vlVtGatG--~iG~~l~~~Ll~~G~~V~~~~R~~~~~---~~~~~~~~-~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      |++|++|||||++  +||++++++|+++|++|++.+|+....   .+...+.+ ...+++|++|.+++++++       .
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            6789999999997  999999999999999999998864211   11111112 356899999999887776       4


Q ss_pred             CccEEEEcCCCCC---------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHHHH
Q 024290          148 GVHTVIDCATGRP---------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (269)
Q Consensus       148 ~~d~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~sK~  208 (269)
                      .+|++|||||...               ++..+++|+.++.++++++...  .-++||++||....  .....+|+.+|.
T Consensus        85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  164 (271)
T PRK06505         85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMGVAKA  164 (271)
T ss_pred             CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchhhhhHH
Confidence            6899999999532               1234568888888777766432  12589999987642  233467999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +++.+.+.       .|++++.|.||.+.+++
T Consensus       165 Al~~l~r~la~el~~~gIrVn~v~PG~i~T~~  196 (271)
T PRK06505        165 ALEASVRYLAADYGPQGIRVNAISAGPVRTLA  196 (271)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCCccccc
Confidence            99887643       68999999999998764

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.74  E-value=2.2e-17  Score=156.48  Aligned_cols=151  Identities=17%  Similarity=0.203  Sum_probs=115.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCCCCC--c-----cccc-------------------cCCCEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAP--A-----DFLR-------------------DWGATV  131 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~---~V~~~~R~~~~~--~-----~~~~-------------------~~~~~~  131 (269)
                      +.+|+|+|||||||||++|++.|++.+.   +|+++.|.....  .     +++.                   ...+.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5679999999999999999999998753   689999964321  0     1100                   125788


Q ss_pred             EEcCCCCCC------cHHHHhcCccEEEEcCCCCC----CccchhhcHHHHHHHHHHHHHc-CCCeEEEecccCC-----
Q 024290          132 VNADLSKPE------TIPATLVGVHTVIDCATGRP----EEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNC-----  195 (269)
Q Consensus       132 i~~Dl~d~~------~l~~~~~~~d~vi~~ag~~~----~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~~-----  195 (269)
                      +.+|+++++      ..+.+.+++|+|||+|+...    .+...++|+.++.+++++|++. +.++||++||..+     
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~  276 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQ  276 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCC
Confidence            999999873      45566678999999998432    3456779999999999999886 4788999998642     


Q ss_pred             -------CC-----------------------------------------------------------CCCCcHHHHHHH
Q 024290          196 -------DK-----------------------------------------------------------HPEVPLMEIKYC  209 (269)
Q Consensus       196 -------~~-----------------------------------------------------------~~~~~y~~sK~~  209 (269)
                             ..                                                           ...+.|..+|..
T Consensus       277 G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~l  356 (605)
T PLN02503        277 GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAM  356 (605)
T ss_pred             CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHH
Confidence                   00                                                           001568999999


Q ss_pred             HHHHHHh--cCCCEEEEEcCcccc
Q 024290          210 TEQFLQD--SGLPHVIIRLWPYWA  231 (269)
Q Consensus       210 ~e~~~~~--~gi~~~ilrp~~i~g  231 (269)
                      +|+++++  .+++++|+||+.|..
T Consensus       357 AE~lV~~~~~~LPv~IvRPsiV~s  380 (605)
T PLN02503        357 GEMVINSMRGDIPVVIIRPSVIES  380 (605)
T ss_pred             HHHHHHHhcCCCCEEEEcCCEecc
Confidence            9999976  479999999999943

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=4.2e-17  Score=140.64  Aligned_cols=157  Identities=13%  Similarity=0.097  Sum_probs=117.1

Q ss_pred             CCCCCCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCCCCC---cccccc-CCCEEEEcCCCCCCcHHHHh----
Q 024290           77 PGTPVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAP---ADFLRD-WGATVVNADLSKPETIPATL----  146 (269)
Q Consensus        77 ~~~~~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~~~~---~~~~~~-~~~~~i~~Dl~d~~~l~~~~----  146 (269)
                      +..++++|+++||||+  ++||++++++|+++|++|++.+|+....   .+...+ ..+.++++|++|.+++.+++    
T Consensus         4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   83 (258)
T PRK07533          4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIA   83 (258)
T ss_pred             cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHH
Confidence            3445788999999998  5999999999999999999999874321   111111 13467899999999888775    


Q ss_pred             ---cCccEEEEcCCCCC---------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHH
Q 024290          147 ---VGVHTVIDCATGRP---------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLM  204 (269)
Q Consensus       147 ---~~~d~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~  204 (269)
                         .++|++|||||...               ++..+++|+.+...+.+++...  .-++||++||....  ......|+
T Consensus        84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~~Y~  163 (258)
T PRK07533         84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMG  163 (258)
T ss_pred             HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccchhhH
Confidence               36899999998532               1235578888888877766432  12589999987642  22345799


Q ss_pred             HHHHHHHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          205 EIKYCTEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       205 ~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      .+|.+++.+.+       ..|++++.|.||.+.+++
T Consensus       164 asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~  199 (258)
T PRK07533        164 PVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRA  199 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChh
Confidence            99999987764       368999999999998765

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.74  E-value=9.5e-18  Score=162.62  Aligned_cols=155  Identities=18%  Similarity=0.189  Sum_probs=121.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+++...+...     ...+.++.+|++|.+++.++++       
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4778999999999999999999999999999999998654333221     1247788999999998887764       


Q ss_pred             CccEEEEcCCCCC-------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHH
Q 024290          148 GVHTVIDCATGRP-------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (269)
Q Consensus       148 ~~d~vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~  208 (269)
                      ++|++|||||...             ++..+++|+.++.++++++    ++.+.++||++||.+..  ......|+.+|.
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  527 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKA  527 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHH
Confidence            6899999999421             1234568888877766554    55667899999998653  334467999999


Q ss_pred             HHHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+       ..|+++++|+||++.+++.
T Consensus       528 a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~  560 (657)
T PRK07201        528 ALDAFSDVAASETLSDGITFTTIHMPLVRTPMI  560 (657)
T ss_pred             HHHHHHHHHHHHHHhhCCcEEEEECCcCccccc
Confidence            9998764       2689999999999988754

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.74  E-value=1.5e-17  Score=142.17  Aligned_cols=152  Identities=16%  Similarity=0.070  Sum_probs=110.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC-CCCccc---cc--cCCCEEEEcCCCCCCcHHHHh-------cCc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR-PAPADF---LR--DWGATVVNADLSKPETIPATL-------VGV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~---~~--~~~~~~i~~Dl~d~~~l~~~~-------~~~  149 (269)
                      +|+|+||||+|+||+.+++.|+++|++|+++.++. +...+.   +.  ..++.++++|++|.+++.+++       .++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999998776433 222211   11  124778999999998887665       368


Q ss_pred             cEEEEcCCCCCC------------ccchhhcHHHHHHHHHHHHH----cC---CCeEEEecccCCC-C-C-CCCcHHHHH
Q 024290          150 HTVIDCATGRPE------------EPIKKVDWEGKVALIQCAKA----MG---IQKYVFYSIHNCD-K-H-PEVPLMEIK  207 (269)
Q Consensus       150 d~vi~~ag~~~~------------~~~~~~n~~~~~~li~a~~~----~~---v~r~V~~SS~~~~-~-~-~~~~y~~sK  207 (269)
                      |+||||+|....            +..+.+|+.++..+++++.+    .+   -++||++||.... . . ...+|+.+|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK  161 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence            999999984211            12356888888777655432    11   2369999987542 1 2 235799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.+++.       .|+++++++||++.+++.
T Consensus       162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~  195 (248)
T PRK06947        162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIH  195 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeccCcccccc
Confidence            999876532       589999999999988753

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.74  E-value=2.7e-17  Score=141.75  Aligned_cols=155  Identities=14%  Similarity=0.053  Sum_probs=114.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-cc---cccc--CCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-AD---FLRD--WGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~---~~~~--~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+|+||+++++.|+++|+.|+++.|+.+.. ..   .+..  .++.++.+|++|.+++.++++      
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999988854321 11   1111  235678999999998877663      


Q ss_pred             -CccEEEEcCCCCCC-----------ccchhhcHHHHHHH----HHHHHHcC-CCeEEEecccCC--CCCCCCcHHHHHH
Q 024290          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVAL----IQCAKAMG-IQKYVFYSIHNC--DKHPEVPLMEIKY  208 (269)
Q Consensus       148 -~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~l----i~a~~~~~-v~r~V~~SS~~~--~~~~~~~y~~sK~  208 (269)
                       ++|++|||+|....           +..+++|+.+...+    ++.+++.+ -++||++||...  +.....+|+.+|.
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa  163 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKG  163 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHH
Confidence             58999999995321           23456787776554    44455554 368999999754  2344568999998


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+.       .|+++++|+||.+.++..
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~  196 (261)
T PRK08936        164 GVKLMTETLAMEYAPKGIRVNNIGPGAINTPIN  196 (261)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcc
Confidence            88876532       589999999999988753

>PRK06484 short chain dehydrogenase; Validated

Probab=99.74  E-value=3e-17  Score=154.98  Aligned_cols=153  Identities=12%  Similarity=0.104  Sum_probs=121.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------CccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d~  151 (269)
                      ..+|+++||||+|+||+++++.|+++|++|++++|+.+...+..+.  ..+..+.+|++|++++.++++       .+|+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999999999999999999999999999999976544333222  245678999999998887763       5899


Q ss_pred             EEEcCCCCC------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 024290          152 VIDCATGRP------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       152 vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~  215 (269)
                      +|||||...            ++..+++|+.++.++++++...  +.++||++||....  ......|+.+|.+++.+++
T Consensus       347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~  426 (520)
T PRK06484        347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSR  426 (520)
T ss_pred             EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHHH
Confidence            999999531            2345678999999988887653  34689999997652  3445789999999998764


Q ss_pred             h-------cCCCEEEEEcCcccccC
Q 024290          216 D-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .       .|++++.|+||.+.+++
T Consensus       427 ~la~e~~~~gI~vn~v~PG~v~t~~  451 (520)
T PRK06484        427 SLACEWAPAGIRVNTVAPGYIETPA  451 (520)
T ss_pred             HHHHHhhhhCeEEEEEEeCCccCch
Confidence            3       58999999999998875

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.74  E-value=1.7e-17  Score=142.93  Aligned_cols=151  Identities=17%  Similarity=0.104  Sum_probs=111.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHh-------cCccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATL-------VGVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~-------~~~d~v  152 (269)
                      |+++||||+|+||++++++|+++|++|++++|+++...+...    ..++.++++|++|.+++.+++       .++|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            479999999999999999999999999999998654332211    125778999999999888776       368999


Q ss_pred             EEcCCCCC-----C--------ccchhhcHHHHHHH----HHHHH-HcCCCeEEEecccCCC--CCCCCcHHHHHHHHHH
Q 024290          153 IDCATGRP-----E--------EPIKKVDWEGKVAL----IQCAK-AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       153 i~~ag~~~-----~--------~~~~~~n~~~~~~l----i~a~~-~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~  212 (269)
                      |||+|...     .        ...+.+|+.+...+    +..+. +.+.++||++||....  ..+...|+.+|.+++.
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~  160 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQ  160 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHH
Confidence            99999421     0        11234555554433    33333 3345699999997653  3445679999999998


Q ss_pred             HHHh-------cCCCEEEEEcCcccccCc
Q 024290          213 FLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.       .|++++.|.||++-+++.
T Consensus       161 ~~~~la~e~~~~gI~v~~v~pG~v~t~~~  189 (259)
T PRK08340        161 LAKGVSRTYGGKGIRAYTVLLGSFDTPGA  189 (259)
T ss_pred             HHHHHHHHhCCCCEEEEEeccCcccCccH
Confidence            7753       689999999999987753

>PLN02778 3,5-epimerase/4-reductase

Probab=99.73  E-value=5e-17  Score=143.20  Aligned_cols=130  Identities=14%  Similarity=0.143  Sum_probs=96.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP  160 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~~  160 (269)
                      .|+||||||+||||++|++.|+++|++|+...                   .|+.|.+.+...+.  ++|+|||+|+...
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~   69 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------GRLENRASLEADIDAVKPTHVFNAAGVTG   69 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------CccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence            36899999999999999999999999997532                   23444455555554  6899999998431


Q ss_pred             ----------CccchhhcHHHHHHHHHHHHHcCCCeEEEeccc-CC--------------CC----CCCCcHHHHHHHHH
Q 024290          161 ----------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH-NC--------------DK----HPEVPLMEIKYCTE  211 (269)
Q Consensus       161 ----------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~-~~--------------~~----~~~~~y~~sK~~~e  211 (269)
                                +...+++|+.++.+|+++|++.|++++++.|+. ..              +.    .+.++|+.+|.+.|
T Consensus        70 ~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E  149 (298)
T PLN02778         70 RPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVE  149 (298)
T ss_pred             CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHH
Confidence                      134567999999999999999998655554332 10              01    12367999999999


Q ss_pred             HHHHhcCCCEEEEEcCccccc
Q 024290          212 QFLQDSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       212 ~~~~~~gi~~~ilrp~~i~g~  232 (269)
                      .+++.+. +..++|+...++.
T Consensus       150 ~~~~~y~-~~~~lr~~~~~~~  169 (298)
T PLN02778        150 ELLKNYE-NVCTLRVRMPISS  169 (298)
T ss_pred             HHHHHhh-ccEEeeecccCCc
Confidence            9998764 5678898776664

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.73  E-value=3.2e-17  Score=141.17  Aligned_cols=154  Identities=18%  Similarity=0.118  Sum_probs=117.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c---cCCCEEEEcCCCCCCcHHHHh---cCcc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R---DWGATVVNADLSKPETIPATL---VGVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~---~~~~~~i~~Dl~d~~~l~~~~---~~~d  150 (269)
                      .+++|+++|||++|+||+++++.|+++|++|++++|+.++..+..   .   ...+.++.+|++|++++.+++   .++|
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            367799999999999999999999999999999999865433221   1   124678899999999887776   4689


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCCC--CCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~~--~~~~~y~~sK~~~e~~  213 (269)
                      ++|||+|...           ++..+++|+.+...+++++    ++.+.+++|++||.....  .....|+.+|.+++.+
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~  163 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAF  163 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHH
Confidence            9999998432           1234567888877776665    444456899998875432  2345678999999877


Q ss_pred             HHh-------cCCCEEEEEcCcccccC
Q 024290          214 LQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       214 ~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .+.       .|++++.+.||.+.++.
T Consensus       164 ~~~la~e~~~~gi~v~~i~PG~v~t~~  190 (259)
T PRK06125        164 TRALGGKSLDDGVRVVGVNPGPVATDR  190 (259)
T ss_pred             HHHHHHHhCccCeEEEEEecCccccHH
Confidence            653       58999999999998763

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=4.1e-17  Score=142.08  Aligned_cols=153  Identities=13%  Similarity=0.123  Sum_probs=114.4

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCCC---CCccccccCC-CEEEEcCCCCCCcHHHHh-------c
Q 024290           81 VRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRP---APADFLRDWG-ATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        81 ~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~~---~~~~~~~~~~-~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      |.+|+++||||+  ++||+++++.|+++|++|++.+|+..   ...+...+.+ ...+++|++|.+++.+++       .
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            668999999997  79999999999999999999998742   1111111111 157899999999887776       3


Q ss_pred             CccEEEEcCCCCC---------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHHHH
Q 024290          148 GVHTVIDCATGRP---------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (269)
Q Consensus       148 ~~d~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~sK~  208 (269)
                      ++|++|||||...               ++..+++|+.+...+.+++...  .-++||++||....  ......|+.+|.
T Consensus        83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  162 (274)
T PRK08415         83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGVAKA  162 (274)
T ss_pred             CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhhhhHHH
Confidence            6899999999521               1235678988888877766532  12589999987542  223457999999


Q ss_pred             HHHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          209 CTEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       209 ~~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +++.+.+       ..|++++.|.||++.++.
T Consensus       163 al~~l~~~la~el~~~gIrVn~v~PG~v~T~~  194 (274)
T PRK08415        163 ALESSVRYLAVDLGKKGIRVNAISAGPIKTLA  194 (274)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence            9987764       368999999999998764

>PRK05855 short chain dehydrogenase; Validated

Probab=99.73  E-value=1.6e-17  Score=158.17  Aligned_cols=154  Identities=16%  Similarity=0.032  Sum_probs=119.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+.+++++||||+|+||++++++|+++|++|++++|+.++..+..   ..  .++.++.+|++|++++.++++       
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            466789999999999999999999999999999999865433221   11  246888999999998887764       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcC-CCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMG-IQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~-v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      ++|+||||||...           ++..+++|+.++.++++++    ++.+ .++||++||...  .......|+.+|.+
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa  471 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAA  471 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHH
Confidence            5899999999522           2234568999988877765    3444 369999999865  33445789999999


Q ss_pred             HHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          210 TEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       210 ~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      ++.+.+       ..|+++++|+||.+-+++
T Consensus       472 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  502 (582)
T PRK05855        472 VLMLSECLRAELAAAGIGVTAICPGFVDTNI  502 (582)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence            987754       368999999999998764

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.73  E-value=5.9e-17  Score=136.44  Aligned_cols=150  Identities=16%  Similarity=0.158  Sum_probs=116.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh---c--CccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL---V--GVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~---~--~~d~vi~~ag  157 (269)
                      |++++||||+|+||+++++.|+++|++|++++|+.+...+ +...+++++.+|++|.+++.+++   .  ++|+||||+|
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA-LQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH-HHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence            4689999999999999999999999999999998654433 33346788999999999888764   2  4899999998


Q ss_pred             CCC-------------CccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCC--CCCCC---CcHHHHHHHHHHHHHh
Q 024290          158 GRP-------------EEPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNC--DKHPE---VPLMEIKYCTEQFLQD  216 (269)
Q Consensus       158 ~~~-------------~~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~--~~~~~---~~y~~sK~~~e~~~~~  216 (269)
                      ...             ++..+++|+.++.++++++...   ..+++|++||...  ...+.   .+|+.+|.+++.+++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  159 (222)
T PRK06953         80 VYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRA  159 (222)
T ss_pred             cccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHH
Confidence            531             1235678899999998888642   2357999988643  11222   3599999999988764


Q ss_pred             -----cCCCEEEEEcCcccccC
Q 024290          217 -----SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       217 -----~gi~~~ilrp~~i~g~~  233 (269)
                           .+++++.++||++.++.
T Consensus       160 ~~~~~~~i~v~~v~Pg~i~t~~  181 (222)
T PRK06953        160 ASLQARHATCIALHPGWVRTDM  181 (222)
T ss_pred             HhhhccCcEEEEECCCeeecCC
Confidence                 47889999999998875

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.73  E-value=3.7e-17  Score=138.86  Aligned_cols=151  Identities=18%  Similarity=0.192  Sum_probs=112.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC-CCCCccccc-----cCCCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRP-RPAPADFLR-----DWGATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      |+++||||+|+||+++++.|+++|++|+++.|+ .+...+...     ..++.++.+|++|++++.+++       ..+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            579999999999999999999999999999883 222211111     125778999999998887765       3589


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHH----HHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVAL----IQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~l----i~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      +||||+|...           ++..+++|+.++..+    +..+++.+.++||++||...  +......|+.+|.+++.+
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~  160 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGF  160 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHH
Confidence            9999998432           123345777876664    44456667789999998753  233456799999988766


Q ss_pred             HHh-------cCCCEEEEEcCcccccCc
Q 024290          214 LQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.       .+++++.++||++.++..
T Consensus       161 ~~~la~~~~~~~i~v~~i~pg~~~t~~~  188 (242)
T TIGR01829       161 TKALAQEGATKGVTVNTISPGYIATDMV  188 (242)
T ss_pred             HHHHHHHhhhhCeEEEEEeeCCCcCccc
Confidence            532       589999999999988754

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=7.3e-17  Score=139.14  Aligned_cols=154  Identities=14%  Similarity=0.115  Sum_probs=114.5

Q ss_pred             CCCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCCCC---Cccccc---cCCCEEEEcCCCCCCcHHHHh-----
Q 024290           80 PVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPA---PADFLR---DWGATVVNADLSKPETIPATL-----  146 (269)
Q Consensus        80 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~~~---~~~~~~---~~~~~~i~~Dl~d~~~l~~~~-----  146 (269)
                      .+.+|+++||||+  ++||+++++.|+++|++|++.+|+...   ..+...   ..++.++++|++|++++++++     
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            4678999999997  899999999999999999999875321   111111   124678899999999887766     


Q ss_pred             --cCccEEEEcCCCCCC---------------ccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHH
Q 024290          147 --VGVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLME  205 (269)
Q Consensus       147 --~~~d~vi~~ag~~~~---------------~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~  205 (269)
                        .++|++|||+|....               ...+++|+.+...+++++...  ..++||++||....  ......|+.
T Consensus        84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  163 (257)
T PRK08594         84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGV  163 (257)
T ss_pred             hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchhHH
Confidence              358999999984320               123456777777766666542  22589999997653  233467999


Q ss_pred             HHHHHHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          206 IKYCTEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       206 sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +|.+++.+.+       ..|++++.|.||.+.++.
T Consensus       164 sKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  198 (257)
T PRK08594        164 AKASLEASVKYLANDLGKDGIRVNAISAGPIRTLS  198 (257)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHh
Confidence            9999998764       268999999999998764

>PRK07069 short chain dehydrogenase; Validated

Probab=99.73  E-value=2.8e-17  Score=140.49  Aligned_cols=150  Identities=17%  Similarity=0.087  Sum_probs=113.0

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC-CCCCcccc---cc----CCCEEEEcCCCCCCcHHHHh-------cCc
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRP-RPAPADFL---RD----WGATVVNADLSKPETIPATL-------VGV  149 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~~---~~----~~~~~i~~Dl~d~~~l~~~~-------~~~  149 (269)
                      +++||||+|+||+++++.|+++|++|++++|+ .+...+..   ..    ..+..+++|++|++++.+++       .++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            38999999999999999999999999999997 33222211   11    11345789999999887765       368


Q ss_pred             cEEEEcCCCCCC-----------ccchhhcHH----HHHHHHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          150 HTVIDCATGRPE-----------EPIKKVDWE----GKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       150 d~vi~~ag~~~~-----------~~~~~~n~~----~~~~li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      |+||||+|....           ...+++|+.    .+..+++++++.+.++||++||...  .......|+.+|.+++.
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~  160 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS  160 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence            999999984321           223456766    5677788888777889999999764  23445679999999988


Q ss_pred             HHHh---------cCCCEEEEEcCcccccCc
Q 024290          213 FLQD---------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~---------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.         .+++++.++||++.+++.
T Consensus       161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~  191 (251)
T PRK07069        161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIV  191 (251)
T ss_pred             HHHHHHHHhcccCCcEEEEEEeecccCCcch
Confidence            7652         248899999999998864

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.73  E-value=2.4e-17  Score=143.56  Aligned_cols=150  Identities=18%  Similarity=0.124  Sum_probs=113.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHhc------Ccc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATLV------GVH  150 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~~------~~d  150 (269)
                      ++|+++|||+ |+||+++++.|. +|++|++++|+.++..+..   ..  ..+.++++|++|.+++.++++      ++|
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT   78 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence            3578999997 799999999996 8999999999765433221   21  246788999999998887763      589


Q ss_pred             EEEEcCCCC----CCccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCCCC--------------------------
Q 024290          151 TVIDCATGR----PEEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDKH--------------------------  198 (269)
Q Consensus       151 ~vi~~ag~~----~~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~~~--------------------------  198 (269)
                      +||||||..    .++..+++|+.++.++++++.+.  .-+++|++||......                          
T Consensus        79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (275)
T PRK06940         79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQ  158 (275)
T ss_pred             EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccc
Confidence            999999953    34567789999999988887543  1146777777643211                          


Q ss_pred             ------CCCcHHHHHHHHHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          199 ------PEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       199 ------~~~~y~~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                            ....|+.+|.+++.+.+       ..|++++.|.||++.+++
T Consensus       159 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~  206 (275)
T PRK06940        159 PDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPL  206 (275)
T ss_pred             ccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCcc
Confidence                  23569999999887654       268999999999998875

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.72  E-value=2.4e-16  Score=125.29  Aligned_cols=175  Identities=20%  Similarity=0.252  Sum_probs=127.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCCcc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~  163 (269)
                      |||.|+||||.+|++|+++++++||+|++++|++.+....   .++.+++.|+.|++.+.+.+.+.|+||..-+......
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~   77 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDN   77 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---ccceeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence            6899999999999999999999999999999998776542   4778999999999999999999999999887542211


Q ss_pred             chhhcHHHHHHHHHHHHHcCCCeEEEecccCC------------CCCCCCcHHHHHHHHH--HHHH-hcCCCEEEEEcCc
Q 024290          164 IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC------------DKHPEVPLMEIKYCTE--QFLQ-DSGLPHVIIRLWP  228 (269)
Q Consensus       164 ~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~------------~~~~~~~y~~sK~~~e--~~~~-~~gi~~~ilrp~~  228 (269)
                       ..........|++..+.+++.|++.++-.+.            +..|...|...+...|  +.++ +.+++||.+.|..
T Consensus        78 -~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa  156 (211)
T COG2910          78 -DELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAA  156 (211)
T ss_pred             -hHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHH
Confidence             1122344667889999999999999976542            2333334566666665  3343 4679999999999


Q ss_pred             ccccCcccccceeEeCCCccccccccCCCCcchhccc
Q 024290          229 YWAICSTYTRREVCLGNGCTNSNCIHGHSGYSATDIR  265 (269)
Q Consensus       229 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvr  265 (269)
                      ++.|+.... ....-++..  .--..+++++++.|..
T Consensus       157 ~f~PGerTg-~yrlggD~l--l~n~~G~SrIS~aDYA  190 (211)
T COG2910         157 FFEPGERTG-NYRLGGDQL--LVNAKGESRISYADYA  190 (211)
T ss_pred             hcCCccccC-ceEeccceE--EEcCCCceeeeHHHHH
Confidence            999954432 222222222  2223577888877753

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.72  E-value=3.9e-17  Score=140.50  Aligned_cols=155  Identities=16%  Similarity=0.059  Sum_probs=118.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCCCCCccc---cccC--CCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAPADF---LRDW--GATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~-V~~~~R~~~~~~~~---~~~~--~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+|+||+.+++.|+++|++ |++++|+.++..+.   +...  .+.++.+|+++++++.++++      
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            367899999999999999999999999998 99999975543321   1111  35678999999988877763      


Q ss_pred             -CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHH----cC-CCeEEEecccCCC--CCCCCcHHHHHH
Q 024290          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCD--KHPEVPLMEIKY  208 (269)
Q Consensus       148 -~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~----~~-v~r~V~~SS~~~~--~~~~~~y~~sK~  208 (269)
                       ++|+||||+|....           +..+++|+.+..++++++.+    .+ .+++|++||....  ......|+.+|.
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~  162 (260)
T PRK06198         83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKG  162 (260)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHH
Confidence             58999999984321           23456888888888877743    22 3589999987652  334568999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++|.+.+.       .+++++.++||+++++..
T Consensus       163 a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        163 ALATLTRNAAYALLRNRIRVNGLNIGWMATEGE  195 (260)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence            99988753       579999999999998754

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=6.8e-17  Score=140.52  Aligned_cols=153  Identities=10%  Similarity=0.032  Sum_probs=115.4

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCCC---CCccccccC-CCEEEEcCCCCCCcHHHHh-------c
Q 024290           81 VRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRP---APADFLRDW-GATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        81 ~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~~---~~~~~~~~~-~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      |.+|+++||||+  ++||.++++.|+++|++|++..|+..   +..+...+. ....+++|++|++++++++       .
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            667999999997  89999999999999999998887531   111111221 2457899999999888776       3


Q ss_pred             CccEEEEcCCCCC---------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHHHH
Q 024290          148 GVHTVIDCATGRP---------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (269)
Q Consensus       148 ~~d~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~sK~  208 (269)
                      ++|++|||||...               ++..+++|+.++..+++++...  +-+++|++||.+..  ......|+.+|.
T Consensus        88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asKa  167 (272)
T PRK08159         88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAKA  167 (272)
T ss_pred             CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHHH
Confidence            5899999998431               2235568999988888877543  23689999987543  233457999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +++.+.+.       .|+++++|.||.+.+..
T Consensus       168 al~~l~~~la~el~~~gIrVn~v~PG~v~T~~  199 (272)
T PRK08159        168 ALEASVKYLAVDLGPKNIRVNAISAGPIKTLA  199 (272)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEeecCCcCCHH
Confidence            99887642       68999999999998754

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.2e-17  Score=141.32  Aligned_cols=151  Identities=13%  Similarity=0.063  Sum_probs=110.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC-CCccccc--cCCCEEEEcCCCCCCcHHHHhcCc---------c
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP-APADFLR--DWGATVVNADLSKPETIPATLVGV---------H  150 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~-~~~~~~~--~~~~~~i~~Dl~d~~~l~~~~~~~---------d  150 (269)
                      ||+++||||+|+||++++++|+++|++|++++|++. ...+...  ..+++++++|++|.+++.++++.+         +
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS   80 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence            368999999999999999999999999999999762 2222111  135788999999999998877421         2


Q ss_pred             --EEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHc-CCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          151 --TVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAM-GIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       151 --~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~-~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                        .+|||+|...            +...+++|+.+...+++.+    ++. +.++||++||...  ...+..+|+.+|.+
T Consensus        81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  160 (251)
T PRK06924         81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAG  160 (251)
T ss_pred             ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHH
Confidence              7899998421            1223456777755555444    443 3468999998754  23345679999999


Q ss_pred             HHHHHHh---------cCCCEEEEEcCcccccC
Q 024290          210 TEQFLQD---------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       210 ~e~~~~~---------~gi~~~ilrp~~i~g~~  233 (269)
                      ++.+++.         .+++++.|+||.+.+++
T Consensus       161 ~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  193 (251)
T PRK06924        161 LDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM  193 (251)
T ss_pred             HHHHHHHHHHHhhhcCCCeEEEEecCCccccHh
Confidence            9987642         47899999999998765

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.1e-17  Score=139.58  Aligned_cols=147  Identities=17%  Similarity=0.119  Sum_probs=116.0

Q ss_pred             EEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHhc---CccEEEEcCCCC
Q 024290           87 LVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV---GVHTVIDCATGR  159 (269)
Q Consensus        87 lVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~---~~d~vi~~ag~~  159 (269)
                      +||||+|+||+++++.|+++|++|++++|+.++..+...    ..+++++.+|++|.+++.++++   ++|++||++|..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            699999999999999999999999999997544332211    2357889999999999988885   479999999842


Q ss_pred             C-----------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh-----cCCCE
Q 024290          160 P-----------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD-----SGLPH  221 (269)
Q Consensus       160 ~-----------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~-----~gi~~  221 (269)
                      .           ++..+++|+.+..+++++....+.++||++||....  ..+...|+.+|.+++.+.+.     .++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~irv  160 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAPVRV  160 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHhhCceE
Confidence            2           223456888899999886665566799999987652  34556799999999988754     36889


Q ss_pred             EEEEcCcccccC
Q 024290          222 VIIRLWPYWAIC  233 (269)
Q Consensus       222 ~ilrp~~i~g~~  233 (269)
                      +.++||.+.+++
T Consensus       161 ~~i~pg~~~t~~  172 (230)
T PRK07041        161 NTVSPGLVDTPL  172 (230)
T ss_pred             EEEeecccccHH
Confidence            999999987764

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=5.6e-17  Score=138.65  Aligned_cols=154  Identities=18%  Similarity=0.116  Sum_probs=114.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---ccc---CCCEEEEcCCC--CCCcHHHH------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD---WGATVVNADLS--KPETIPAT------  145 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~---~~~~~i~~Dl~--d~~~l~~~------  145 (269)
                      .+++|+++||||+|+||.++++.|+++|++|++++|+.++..+.   +.+   ..+.++.+|++  +.+++.++      
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999986543222   111   24667788886  44444333      


Q ss_pred             -hcCccEEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHH
Q 024290          146 -LVGVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       146 -~~~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                       +.++|+|||||+...            ++..+++|+.++.++++++    ++.+.++||++||...  ......+|+.+
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  168 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVS  168 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHH
Confidence             346899999998421            1234568888877777766    4567789999998754  23455689999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      |.+++.+++.       .++++++++||.+-++.
T Consensus       169 K~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~  202 (247)
T PRK08945        169 KFATEGMMQVLADEYQGTNLRVNCINPGGTRTAM  202 (247)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEecCCccCcc
Confidence            9999987643       47899999999987653

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.72  E-value=3.1e-17  Score=143.66  Aligned_cols=151  Identities=15%  Similarity=0.051  Sum_probs=112.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC---------CCCcccc---cc--CCCEEEEcCCCCCCcHHHHh
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR---------PAPADFL---RD--WGATVVNADLSKPETIPATL  146 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~---------~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~  146 (269)
                      +++|+++||||+++||+++++.|+++|++|++++|+.         +...+..   ..  ..+.++.+|++|.+++.+++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            6789999999999999999999999999999998764         2221111   11  23667899999998887765


Q ss_pred             -------cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcC------CCeEEEecccCC--C
Q 024290          147 -------VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMG------IQKYVFYSIHNC--D  196 (269)
Q Consensus       147 -------~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~------v~r~V~~SS~~~--~  196 (269)
                             .++|++|||||...           ++..+++|+.++..+++++.    +.+      .++||++||...  +
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~  163 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG  163 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence                   46899999999422           23456789999887777663    221      258999998754  2


Q ss_pred             CCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCccccc
Q 024290          197 KHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAI  232 (269)
Q Consensus       197 ~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~  232 (269)
                      ......|+.+|.+++.+.+.       .|++++.|.|| +...
T Consensus       164 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~  205 (286)
T PRK07791        164 SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR  205 (286)
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC
Confidence            33456899999999877642       68999999998 5443

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.72  E-value=9e-17  Score=136.18  Aligned_cols=152  Identities=13%  Similarity=-0.023  Sum_probs=112.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c--CCCEEEEcCCCCCCcHHHHh-------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D--WGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      .+++|+++||||+++||+++++.|+++|++|++++|+.++..+..+   .  ..+..+.+|+.|++++++++       .
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3678999999999999999999999999999999998765433321   1  23567889999999887765       3


Q ss_pred             -CccEEEEcCCCCC-C-----------ccchhhcHHHHHHHHH----HHHHcC-CCeEEEecccCCCCCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGRP-E-----------EPIKKVDWEGKVALIQ----CAKAMG-IQKYVFYSIHNCDKHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~~-~-----------~~~~~~n~~~~~~li~----a~~~~~-v~r~V~~SS~~~~~~~~~~y~~sK~~  209 (269)
                       ++|++|||+|... .           ...+++|..+...+++    .+++.+ .+.||++||.... .....|+.+|.+
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-~~~~~Y~asKaa  160 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-QDLTGVESSNAL  160 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-CCcchhHHHHHH
Confidence             6899999997321 1           1123345555554443    444443 4689999987543 345679999999


Q ss_pred             HHHHHH-------hcCCCEEEEEcCccccc
Q 024290          210 TEQFLQ-------DSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       210 ~e~~~~-------~~gi~~~ilrp~~i~g~  232 (269)
                      ++.+.+       ..+++++.|.||++.++
T Consensus       161 l~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        161 VSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            988764       36899999999999887

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.72  E-value=4.4e-17  Score=139.27  Aligned_cols=153  Identities=14%  Similarity=0.080  Sum_probs=118.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC----CCEEEEcCCCCCCcHHHHh-------cC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW----GATVVNADLSKPETIPATL-------VG  148 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~----~~~~i~~Dl~d~~~l~~~~-------~~  148 (269)
                      +..++.||||||++++|+.++.+|+++|..+++.+.+.+...+..+..    .+..+.||++|.+++.+..       ++
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~  114 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGD  114 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            577899999999999999999999999999999999876554433322    3888999999999887664       47


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHH----HHHHHHHHcCCCeEEEecccCCC--CCCCCcHHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKV----ALIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~----~li~a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e  211 (269)
                      +|++|||||...           -+..+++|+.+..    +++..+.+.+-++||.++|..+.  .....+|+.+|.++.
T Consensus       115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~v  194 (300)
T KOG1201|consen  115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAV  194 (300)
T ss_pred             ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHH
Confidence            899999999422           1345678887755    45566677777899999998753  344568999999987


Q ss_pred             HHHHh----------cCCCEEEEEcCccccc
Q 024290          212 QFLQD----------SGLPHVIIRLWPYWAI  232 (269)
Q Consensus       212 ~~~~~----------~gi~~~ilrp~~i~g~  232 (269)
                      .+.+.          .|++.+.+.|+.+-..
T Consensus       195 GfhesL~~EL~~~~~~~IktTlv~P~~i~Tg  225 (300)
T KOG1201|consen  195 GFHESLSMELRALGKDGIKTTLVCPYFINTG  225 (300)
T ss_pred             HHHHHHHHHHHhcCCCCeeEEEEeeeecccc
Confidence            65421          5799999999887644

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=3.7e-17  Score=144.50  Aligned_cols=149  Identities=19%  Similarity=0.094  Sum_probs=112.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Cccc---ccc--CCCEEEEcCCCCCCcHHHHh------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADF---LRD--WGATVVNADLSKPETIPATL------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~------~  147 (269)
                      .+++|+++||||+|+||++++++|+++|++|++.++.... ..+.   +..  ..+.++.+|++|.+++.+++      .
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g   88 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG   88 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence            4788999999999999999999999999999999875432 1111   111  24678899999998887766      3


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----c-------CCCeEEEecccCCC--CCCCCcH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----M-------GIQKYVFYSIHNCD--KHPEVPL  203 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~-------~v~r~V~~SS~~~~--~~~~~~y  203 (269)
                      ++|+||||||...           ++..+++|+.++.++++++..    .       ..++||++||....  ......|
T Consensus        89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  168 (306)
T PRK07792         89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANY  168 (306)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchH
Confidence            6899999999422           233566899999888887642    1       12589999987642  3344579


Q ss_pred             HHHHHHHHHHHH-------hcCCCEEEEEcCc
Q 024290          204 MEIKYCTEQFLQ-------DSGLPHVIIRLWP  228 (269)
Q Consensus       204 ~~sK~~~e~~~~-------~~gi~~~ilrp~~  228 (269)
                      +.+|.+++.+++       ..|++++.|.|+.
T Consensus       169 ~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~  200 (306)
T PRK07792        169 GAAKAGITALTLSAARALGRYGVRANAICPRA  200 (306)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC
Confidence            999999998764       2689999999983

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.71  E-value=1.4e-16  Score=145.08  Aligned_cols=154  Identities=14%  Similarity=0.077  Sum_probs=112.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc--cCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++..+...  ..++..+.+|++|++++.+.++++|++|||||
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG  254 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG  254 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence            4678999999999999999999999999999999997654332221  12466789999999999999999999999998


Q ss_pred             CCC--------CccchhhcHHHHHHHHHHHHH----cCC----CeEEEecccCCCCCCCCcHHHHHHHHHHHHH----hc
Q 024290          158 GRP--------EEPIKKVDWEGKVALIQCAKA----MGI----QKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQ----DS  217 (269)
Q Consensus       158 ~~~--------~~~~~~~n~~~~~~li~a~~~----~~v----~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~----~~  217 (269)
                      ...        .+..+++|+.++.++++++.+    .+.    ..+|++|+..........|+.+|.+++.+..    +.
T Consensus       255 i~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~~~~~~~~Y~ASKaAl~~l~~l~~~~~  334 (406)
T PRK07424        255 INVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEVNPAFSPLYELSKRALGDLVTLRRLDA  334 (406)
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccccCCCchHHHHHHHHHHHHHHHHHhCC
Confidence            532        245678999999998888643    221    2356666533222122459999999987542    24


Q ss_pred             CCCEEEEEcCcccccC
Q 024290          218 GLPHVIIRLWPYWAIC  233 (269)
Q Consensus       218 gi~~~ilrp~~i~g~~  233 (269)
                      ++.+..+.||.+..+.
T Consensus       335 ~~~I~~i~~gp~~t~~  350 (406)
T PRK07424        335 PCVVRKLILGPFKSNL  350 (406)
T ss_pred             CCceEEEEeCCCcCCC
Confidence            6667777777765543

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.71  E-value=7.2e-17  Score=143.58  Aligned_cols=154  Identities=17%  Similarity=0.097  Sum_probs=113.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCC--CcH---HHHhcC-
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKP--ETI---PATLVG-  148 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~--~~l---~~~~~~-  148 (269)
                      .++.++||||+|+||++++++|+++|++|++++|++++..+..+       ...+..+.+|+++.  +.+   .+.+++ 
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999998765433211       12356778999852  222   233343 


Q ss_pred             -ccEEEEcCCCCC-------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCCC----CCCCcHHHH
Q 024290          149 -VHTVIDCATGRP-------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK----HPEVPLMEI  206 (269)
Q Consensus       149 -~d~vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~~----~~~~~y~~s  206 (269)
                       +|++|||||...             .+..+++|+.++..+.+++    ++.+.++||++||.....    .....|+.+
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aS  211 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAAT  211 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHH
Confidence             569999998431             1134668888888777665    455667999999976522    234679999


Q ss_pred             HHHHHHHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          207 KYCTEQFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       207 K~~~e~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      |.+++.+.+       ..|++++++.||.+.+++..
T Consensus       212 Kaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        212 KAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS  247 (320)
T ss_pred             HHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence            999987764       36899999999999887643

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.71  E-value=1.4e-16  Score=137.47  Aligned_cols=154  Identities=13%  Similarity=0.066  Sum_probs=114.6

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCCCC--Cccc---ccc--CCCEEEEcCCCCCCcHHHHh-----
Q 024290           81 VRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPA--PADF---LRD--WGATVVNADLSKPETIPATL-----  146 (269)
Q Consensus        81 ~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~~~--~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~-----  146 (269)
                      +++|+++||||+  ++||++++++|+++|++|++..|+.+.  ..+.   +.+  ..+.++++|++|++++.+++     
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            678999999986  899999999999999999888765332  1111   111  13568899999999988776     


Q ss_pred             --cCccEEEEcCCCCC---------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHH
Q 024290          147 --VGVHTVIDCATGRP---------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLME  205 (269)
Q Consensus       147 --~~~d~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~  205 (269)
                        .++|++|||+|...               ++..+++|+.++..+.+++...  .-++||++||....  ......|+.
T Consensus        84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~a  163 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGV  163 (258)
T ss_pred             HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchhhH
Confidence              36899999998431               1234568888888777766432  12689999997642  234467999


Q ss_pred             HHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          206 IKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       206 sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +|.+++.+.+.       .|++++.|.||.+.+++.
T Consensus       164 sKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~  199 (258)
T PRK07370        164 AKAALEASVRYLAAELGPKNIRVNAISAGPIRTLAS  199 (258)
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchh
Confidence            99999987643       689999999999987643

>TIGR02415 23BDH acetoin reductases

Probab=99.71  E-value=2.9e-17  Score=140.72  Aligned_cols=150  Identities=16%  Similarity=0.141  Sum_probs=113.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHhc-------CccE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATLV-------GVHT  151 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d~  151 (269)
                      |+++||||+|+||.+++++|+++|++|+++.|+.+...+..   ..  ..+.++.+|++|++++.++++       .+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999754332221   11  246788999999998877753       5799


Q ss_pred             EEEcCCCCCC-----------ccchhhcHHHHHHHHHHHH----HcC-CCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          152 VIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       152 vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~----~~~-v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      ||||+|....           +..+++|+.++..+++++.    +.+ .+++|++||...  +.....+|+.+|.+++.+
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  160 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGL  160 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHHH
Confidence            9999985321           2345688888776666553    333 368999998654  334567899999999887


Q ss_pred             HHh-------cCCCEEEEEcCcccccC
Q 024290          214 LQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       214 ~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      ++.       .++++++++||.+.++.
T Consensus       161 ~~~l~~~~~~~~i~v~~v~Pg~i~t~~  187 (254)
T TIGR02415       161 TQTAAQELAPKGITVNAYCPGIVKTPM  187 (254)
T ss_pred             HHHHHHHhcccCeEEEEEecCcccChh
Confidence            753       48999999999997765

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1e-16  Score=141.64  Aligned_cols=154  Identities=17%  Similarity=0.079  Sum_probs=112.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC----------Ccc---ccccC--CCEEEEcCCCCCCcHHH
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA----------PAD---FLRDW--GATVVNADLSKPETIPA  144 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~----------~~~---~~~~~--~~~~i~~Dl~d~~~l~~  144 (269)
                      .+++|+++||||+++||+++++.|+++|++|++++|+...          ..+   .++..  .+.++++|++|++++++
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            4678999999999999999999999999999999997421          111   11111  35678999999998887


Q ss_pred             Hh-------cCccEEEEcC-CCC------C---------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCCC
Q 024290          145 TL-------VGVHTVIDCA-TGR------P---------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK  197 (269)
Q Consensus       145 ~~-------~~~d~vi~~a-g~~------~---------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~~  197 (269)
                      ++       .++|++|||+ |..      .         +...+++|+.+...+++++    ++.+.++||++||.....
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~  164 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEY  164 (305)
T ss_pred             HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccc
Confidence            76       3689999999 631      1         1123456777766665555    334446999999864321


Q ss_pred             -----CCCCcHHHHHHHHHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          198 -----HPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       198 -----~~~~~y~~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                           .....|+.+|.+++.+.+       ..|++++.|.||++.+++
T Consensus       165 ~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~  212 (305)
T PRK08303        165 NATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM  212 (305)
T ss_pred             cCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH
Confidence                 124569999999988764       268999999999997764

>PRK08324 short chain dehydrogenase; Validated

Probab=99.70  E-value=6.1e-17  Score=157.47  Aligned_cols=151  Identities=21%  Similarity=0.155  Sum_probs=118.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc----CCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD----WGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~----~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      .+.+|+++||||+|+||+++++.|+++|++|++++|+.+........    .++.++.+|++|.+++.++++       +
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~  498 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG  498 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999999986543322211    257789999999998877763       6


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCC-CeEEEecccCCC--CCCCCcHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGI-QKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v-~r~V~~SS~~~~--~~~~~~y~~sK~~~  210 (269)
                      +|+||||+|...           ++..+++|+.++..+++++    ++.+. ++||++||....  .....+|+.+|.+.
T Consensus       499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~  578 (681)
T PRK08324        499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAE  578 (681)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHH
Confidence            899999999422           2345678899988886666    44454 699999997642  33456899999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCccc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYW  230 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~  230 (269)
                      +.+++.       .|+++++++|+.+|
T Consensus       579 ~~l~~~la~e~~~~gIrvn~v~Pg~v~  605 (681)
T PRK08324        579 LHLVRQLALELGPDGIRVNGVNPDAVV  605 (681)
T ss_pred             HHHHHHHHHHhcccCeEEEEEeCceee
Confidence            988753       47999999999997

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.70  E-value=8.9e-17  Score=135.64  Aligned_cols=176  Identities=21%  Similarity=0.179  Sum_probs=117.7

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-CccEEEEcCCCCC----
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-GVHTVIDCATGRP----  160 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-~~d~vi~~ag~~~----  160 (269)
                      |+||||||+||++|+..|.+.||+|++++|++++....+.. .+       ...+.+.+... ++|+|||+||..-    
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~-~v-------~~~~~~~~~~~~~~DavINLAG~~I~~rr   72 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP-NV-------TLWEGLADALTLGIDAVINLAGEPIAERR   72 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc-cc-------cccchhhhcccCCCCEEEECCCCcccccc
Confidence            68999999999999999999999999999987765442211 11       12233444444 7999999999421    


Q ss_pred             C-----ccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCCCCC-------CCcH-----HHHHHHHHHHH---HhcC
Q 024290          161 E-----EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDKHP-------EVPL-----MEIKYCTEQFL---QDSG  218 (269)
Q Consensus       161 ~-----~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~~~~-------~~~y-----~~sK~~~e~~~---~~~g  218 (269)
                      |     +.+.+..+..|..|+++..+.  +.+.+|.-|.++.+.+.       ..++     +..-..-|+..   +..|
T Consensus        73 Wt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~g  152 (297)
T COG1090          73 WTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLG  152 (297)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcC
Confidence            2     234456677889999988744  45566666655431111       1222     12222333333   3469


Q ss_pred             CCEEEEEcCcccccCcccccceeEeCCCccccccccCCCCcchhccchhcC
Q 024290          219 LPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIHGHSGYSATDIRSFTQ  269 (269)
Q Consensus       219 i~~~ilrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvrd~~~  269 (269)
                      .+++++|.|.|.++.......+........-.+...|..|++|.++.|+++
T Consensus       153 tRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~  203 (297)
T COG1090         153 TRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVN  203 (297)
T ss_pred             ceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHH
Confidence            999999999999986666655554444344456668899999999999864

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.70  E-value=8.8e-17  Score=135.67  Aligned_cols=153  Identities=18%  Similarity=0.257  Sum_probs=121.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeC-----CCCCCccccccCCCEEEEcCCCCCCcHHHHh--cCccEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDE--GYDVRCLVR-----PRPAPADFLRDWGATVVNADLSKPETIPATL--VGVHTVI  153 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~--G~~V~~~~R-----~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~--~~~d~vi  153 (269)
                      .++++||||.||||++.+..+...  .++.+.++.     +...+.+.....+.+++++|+.+...+..++  ..+|.|+
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi   85 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVI   85 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence            388999999999999999999886  366666553     1112223334557899999999988887777  4689999


Q ss_pred             EcCCC-------CCCccchhhcHHHHHHHHHHHHHc-CCCeEEEecccCC--------------CCCCCCcHHHHHHHHH
Q 024290          154 DCATG-------RPEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNC--------------DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       154 ~~ag~-------~~~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~~--------------~~~~~~~y~~sK~~~e  211 (269)
                      |.|+.       .+.-.+...|+.++..|+++++.. ++++||++||..+              ...|.+||+++|+++|
T Consensus        86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE  165 (331)
T KOG0747|consen   86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAE  165 (331)
T ss_pred             hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHH
Confidence            99983       223345568999999999999988 6889999998643              2457789999999999


Q ss_pred             HHHHh----cCCCEEEEEcCcccccCcc
Q 024290          212 QFLQD----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       212 ~~~~~----~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+++.    ++++++++|-++||||...
T Consensus       166 ~~v~Sy~~sy~lpvv~~R~nnVYGP~q~  193 (331)
T KOG0747|consen  166 MLVRSYGRSYGLPVVTTRMNNVYGPNQY  193 (331)
T ss_pred             HHHHHHhhccCCcEEEEeccCccCCCcC
Confidence            98864    7999999999999999653

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=5.8e-17  Score=138.44  Aligned_cols=154  Identities=12%  Similarity=0.065  Sum_probs=114.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      +.+++++|||++|+||+++++.|+++|++|++++|+.++..+...     ...+.++++|++|.+++.++++       +
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999997654322211     1246778999999888766553       4


Q ss_pred             ccEEEEcCCCCCC--------------------ccchhhcHHHHHHHHHHH----HHc-CCCeEEEecccCCC-CCCCCc
Q 024290          149 VHTVIDCATGRPE--------------------EPIKKVDWEGKVALIQCA----KAM-GIQKYVFYSIHNCD-KHPEVP  202 (269)
Q Consensus       149 ~d~vi~~ag~~~~--------------------~~~~~~n~~~~~~li~a~----~~~-~v~r~V~~SS~~~~-~~~~~~  202 (269)
                      +|+||||+|....                    ...+++|+.++..+.+++    .+. .-++||++||.... ..+...
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~  162 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQTN  162 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCCCch
Confidence            7999999984211                    123457888877665544    333 23479999887543 345678


Q ss_pred             HHHHHHHHHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          203 LMEIKYCTEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       203 y~~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      |+.+|.+++.+++       ..+++++.++||.+.++..
T Consensus       163 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~  201 (253)
T PRK08217        163 YSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMT  201 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccc
Confidence            9999999988764       2689999999999988754

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=1.7e-16  Score=137.11  Aligned_cols=153  Identities=12%  Similarity=0.096  Sum_probs=113.3

Q ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCCC---CCccccccCC-CEEEEcCCCCCCcHHHHh-------c
Q 024290           81 VRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRP---APADFLRDWG-ATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        81 ~~~~~vlVtGatG--~iG~~l~~~Ll~~G~~V~~~~R~~~---~~~~~~~~~~-~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      +++|+++||||++  +||+++++.|+++|++|++.+|+..   ...+...+.+ ..++++|++|++++++++       .
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG   85 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            6789999999997  8999999999999999999888631   1111111112 345789999999988776       3


Q ss_pred             CccEEEEcCCCCC---------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHHHH
Q 024290          148 GVHTVIDCATGRP---------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (269)
Q Consensus       148 ~~d~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~sK~  208 (269)
                      ++|++|||+|...               ++..+++|+.+...+++++...  .-++||++||....  ......|+.+|+
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  165 (260)
T PRK06603         86 SFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAKA  165 (260)
T ss_pred             CccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccchhhHHH
Confidence            5899999998421               1224568888888877765332  12589999997642  233467999999


Q ss_pred             HHHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          209 CTEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       209 ~~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +++.+.+       ..|++++.+.||.+.+++
T Consensus       166 al~~l~~~la~el~~~gIrVn~v~PG~v~T~~  197 (260)
T PRK06603        166 ALEASVKYLANDMGENNIRVNAISAGPIKTLA  197 (260)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcCcchh
Confidence            9988764       378999999999998764

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.70  E-value=2e-16  Score=136.90  Aligned_cols=149  Identities=17%  Similarity=0.045  Sum_probs=107.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC-CCccc---ccc---CCCEEEEcCCCCCCcHH----HHh------
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP-APADF---LRD---WGATVVNADLSKPETIP----ATL------  146 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~-~~~~~---~~~---~~~~~i~~Dl~d~~~l~----~~~------  146 (269)
                      +.++||||+|+||+++++.|+++|++|+++.|+.+ ...+.   +..   ..+.++.+|++|.+++.    +++      
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            46999999999999999999999999999876532 22221   111   13557899999987653    222      


Q ss_pred             -cCccEEEEcCCCCC----------------------CccchhhcHHHHHHHHHHHHHcC----------CCeEEEeccc
Q 024290          147 -VGVHTVIDCATGRP----------------------EEPIKKVDWEGKVALIQCAKAMG----------IQKYVFYSIH  193 (269)
Q Consensus       147 -~~~d~vi~~ag~~~----------------------~~~~~~~n~~~~~~li~a~~~~~----------v~r~V~~SS~  193 (269)
                       .++|+||||||...                      +...+++|+.+...+++++....          ..++|+++|.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence             46899999998421                      11336788888888877653221          2368888876


Q ss_pred             CCC--CCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCccccc
Q 024290          194 NCD--KHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAI  232 (269)
Q Consensus       194 ~~~--~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~  232 (269)
                      ...  ..+..+|+.+|.+++.+++.       .|++++.|+||.+..+
T Consensus       162 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~  209 (267)
T TIGR02685       162 MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP  209 (267)
T ss_pred             hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence            542  34556899999999987643       6899999999998654

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=2.4e-16  Score=136.39  Aligned_cols=152  Identities=14%  Similarity=0.110  Sum_probs=112.6

Q ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cc-c-CCCEEEEcCCCCCCcHHHHh-------
Q 024290           81 VRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR-D-WGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        81 ~~~~~vlVtGatG--~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~-~-~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      +++|+++||||++  +||+++++.|+++|++|++.+|+. +..+.   +. . ..+..+.+|++|++++++++       
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            6678999999985  999999999999999999988863 21111   11 1 13567899999999988776       


Q ss_pred             cCccEEEEcCCCCCC----------------ccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHH
Q 024290          147 VGVHTVIDCATGRPE----------------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEI  206 (269)
Q Consensus       147 ~~~d~vi~~ag~~~~----------------~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~s  206 (269)
                      .++|++|||||....                +..+++|+.+...+.+++...  .-++||++||.+..  ......|+.+
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~as  162 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLA  162 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchhHHH
Confidence            358999999984321                123457877877777765432  22589999987653  2334579999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      |.+++.+.+.       .|++++.|.||.+..+.
T Consensus       163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~  196 (262)
T PRK07984        163 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLA  196 (262)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEeeeecCcccchH
Confidence            9999987643       68999999999997753

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.70  E-value=1.4e-16  Score=138.02  Aligned_cols=155  Identities=15%  Similarity=0.056  Sum_probs=120.0

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--------CCCEEEEcCCCCCCcHHHHh----
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--------WGATVVNADLSKPETIPATL----  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--------~~~~~i~~Dl~d~~~l~~~~----  146 (269)
                      ..+.+|+++|||++.+||++++++|++.|.+|++.+|+.+...+....        ..+..+.+|+++.+++++++    
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999987754333221        24778999999887766654    


Q ss_pred             ----cCccEEEEcCCCCC------------CccchhhcHHH-HHHHHHHH----HHcCCCeEEEecccCCCCC--CC-Cc
Q 024290          147 ----VGVHTVIDCATGRP------------EEPIKKVDWEG-KVALIQCA----KAMGIQKYVFYSIHNCDKH--PE-VP  202 (269)
Q Consensus       147 ----~~~d~vi~~ag~~~------------~~~~~~~n~~~-~~~li~a~----~~~~v~r~V~~SS~~~~~~--~~-~~  202 (269)
                          .++|++|||||...            ++..+++|+.| ...+.+++    ++.+.+.++++||......  +. ..
T Consensus        84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~  163 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVA  163 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCccc
Confidence                46999999999422            34566788885 55555555    3445668999998865322  22 68


Q ss_pred             HHHHHHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          203 LMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       203 y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      |+.+|.+++++.+.       .|+++++|-||.+.+++
T Consensus       164 Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  164 YGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL  201 (270)
T ss_pred             chhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence            99999999998753       79999999999999886

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.70  E-value=1.7e-16  Score=134.48  Aligned_cols=148  Identities=17%  Similarity=0.131  Sum_probs=112.8

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Ccc---ccccC--CCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PAD---FLRDW--GATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~---~~~~~--~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      ++|||++|+||+++++.|+++|++|++++|+.+. ...   .+...  .+.++.+|++|.+++.++++       ++|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5899999999999999999999999999987522 111   11112  36789999999998877764       47999


Q ss_pred             EEcCCCCCC-----------ccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH
Q 024290          153 IDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       153 i~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~  215 (269)
                      ||++|....           +..+++|+.++.++++++.+    .+.++||++||...  .......|+.+|.+.+.+++
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~  160 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTK  160 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHH
Confidence            999995321           23456888888888888764    45679999999643  33456779999998887653


Q ss_pred             -------hcCCCEEEEEcCcccccC
Q 024290          216 -------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 -------~~gi~~~ilrp~~i~g~~  233 (269)
                             ..|+.+++++||.+.++.
T Consensus       161 ~l~~~~~~~g~~~~~i~pg~~~~~~  185 (239)
T TIGR01830       161 SLAKELASRNITVNAVAPGFIDTDM  185 (239)
T ss_pred             HHHHHHhhcCeEEEEEEECCCCChh
Confidence                   268999999999987754

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=1.4e-16  Score=137.15  Aligned_cols=154  Identities=12%  Similarity=0.067  Sum_probs=112.9

Q ss_pred             CCCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCCC-----------CC---ccccccC--CCEEEEcCCCCCCc
Q 024290           80 PVRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRP-----------AP---ADFLRDW--GATVVNADLSKPET  141 (269)
Q Consensus        80 ~~~~~~vlVtGatG--~iG~~l~~~Ll~~G~~V~~~~R~~~-----------~~---~~~~~~~--~~~~i~~Dl~d~~~  141 (269)
                      .+++|+++||||+|  +||++++++|+++|++|+++.|...           +.   .+.+...  .+.++++|++|.++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            46789999999995  8999999999999999998764310           00   0111111  36678999999999


Q ss_pred             HHHHhc-------CccEEEEcCCCCC-----------CccchhhcHHHHHHHHH----HHHHcCCCeEEEecccCCC--C
Q 024290          142 IPATLV-------GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCD--K  197 (269)
Q Consensus       142 l~~~~~-------~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~----a~~~~~v~r~V~~SS~~~~--~  197 (269)
                      +.++++       ++|+||||+|...           ++..+++|+.+...+.+    .+++.+.++||++||....  .
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  162 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPM  162 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCC
Confidence            887763       4799999998421           22345678888776644    4444445699999997653  3


Q ss_pred             CCCCcHHHHHHHHHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          198 HPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       198 ~~~~~y~~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      .+...|+.+|.+++.+.+       ..+++++.++||++.+++
T Consensus       163 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~  205 (256)
T PRK12859        163 VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGW  205 (256)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCC
Confidence            345679999999987754       268999999999987763

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=1.8e-16  Score=136.92  Aligned_cols=153  Identities=13%  Similarity=0.104  Sum_probs=111.5

Q ss_pred             CCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEeCCCCC---Ccccccc-CCCEEEEcCCCCCCcHHHHh-------c
Q 024290           81 VRPTSILVVGA--TGTLGRQIVRRALDEGYDVRCLVRPRPA---PADFLRD-WGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        81 ~~~~~vlVtGa--tG~iG~~l~~~Ll~~G~~V~~~~R~~~~---~~~~~~~-~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      +++|+++||||  +++||+++++.|+++|++|++..|....   ..+...+ .....+++|++|++++++++       .
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            67789999997  6799999999999999999998775211   1111111 13457899999999988776       3


Q ss_pred             CccEEEEcCCCCCC----------------ccchhhcHHHHHHHHHHHHH---cCCCeEEEecccCCC--CCCCCcHHHH
Q 024290          148 GVHTVIDCATGRPE----------------EPIKKVDWEGKVALIQCAKA---MGIQKYVFYSIHNCD--KHPEVPLMEI  206 (269)
Q Consensus       148 ~~d~vi~~ag~~~~----------------~~~~~~n~~~~~~li~a~~~---~~v~r~V~~SS~~~~--~~~~~~y~~s  206 (269)
                      ++|++|||||....                +..+++|+.+...+.+++..   .+.++||++||....  ......|+.+
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~~Y~as  163 (261)
T PRK08690         84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMA  163 (261)
T ss_pred             CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcccchhH
Confidence            68999999995321                11235677777666665432   122589999987652  2344679999


Q ss_pred             HHHHHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          207 KYCTEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       207 K~~~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      |.+++.+.+       ..|++++.|.||.+.++.
T Consensus       164 Kaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~  197 (261)
T PRK08690        164 KASLEAGIRFTAACLGKEGIRCNGISAGPIKTLA  197 (261)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccchh
Confidence            999987764       368999999999998864

>PRK06484 short chain dehydrogenase; Validated

Probab=99.70  E-value=1.3e-16  Score=150.61  Aligned_cols=153  Identities=14%  Similarity=0.089  Sum_probs=119.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC--CCEEEEcCCCCCCcHHHHh-------cCccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATL-------VGVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~--~~~~i~~Dl~d~~~l~~~~-------~~~d~  151 (269)
                      ..+|+++||||+++||.++++.|+++|++|++++|+.++..+...+.  ++.++.+|++|++++.+++       .++|+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            45789999999999999999999999999999999866554433332  4567899999999887776       35899


Q ss_pred             EEEcCCCCC-------------CccchhhcHHHHHHHHHHHHH----cCCC-eEEEecccCCC--CCCCCcHHHHHHHHH
Q 024290          152 VIDCATGRP-------------EEPIKKVDWEGKVALIQCAKA----MGIQ-KYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (269)
Q Consensus       152 vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~~~----~~v~-r~V~~SS~~~~--~~~~~~y~~sK~~~e  211 (269)
                      ||||+|...             ++..+++|+.++..+++++..    .+.+ +||++||....  ......|+.+|.+++
T Consensus        83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~  162 (520)
T PRK06484         83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVI  162 (520)
T ss_pred             EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHH
Confidence            999998521             224566888888887777643    3433 89999987642  334567999999999


Q ss_pred             HHHH-------hcCCCEEEEEcCcccccC
Q 024290          212 QFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       212 ~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      .+.+       ..+++++.++||.+.+++
T Consensus       163 ~l~~~la~e~~~~~i~v~~i~Pg~v~t~~  191 (520)
T PRK06484        163 SLTRSLACEWAAKGIRVNAVLPGYVRTQM  191 (520)
T ss_pred             HHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence            8764       268999999999987765

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.69  E-value=1.3e-16  Score=135.57  Aligned_cols=150  Identities=13%  Similarity=0.081  Sum_probs=112.8

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-ccc---ccc--CCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADF---LRD--WGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      |+||||+|+||.++++.|+++|++|++++|+.+.. .+.   +++  .++.++.+|++|.+++.++++       .+|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999998764321 111   111  247789999999998877653       57999


Q ss_pred             EEcCCCCC-----------CccchhhcHHHHHHHHHHH-----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 024290          153 IDCATGRP-----------EEPIKKVDWEGKVALIQCA-----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       153 i~~ag~~~-----------~~~~~~~n~~~~~~li~a~-----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~  214 (269)
                      |||+|...           ++..+++|+.++.++++++     ++.+.++||++||...  +......|+.+|.+++.+.
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~  160 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGAT  160 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHH
Confidence            99998421           2234668888988888765     2345579999999653  3344568999999887665


Q ss_pred             H-------hcCCCEEEEEcCcccccCcc
Q 024290          215 Q-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       215 ~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +       ..|++++.++||.+.+++..
T Consensus       161 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~  188 (239)
T TIGR01831       161 KALAVELAKRKITVNCIAPGLIDTEMLA  188 (239)
T ss_pred             HHHHHHHhHhCeEEEEEEEccCccccch
Confidence            3       26899999999999887643

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.69  E-value=1.1e-16  Score=155.10  Aligned_cols=153  Identities=16%  Similarity=0.148  Sum_probs=115.0

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHhc----
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATLV----  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~~----  147 (269)
                      .++.+|+++||||+|+||++++++|+++|++|++++|+.+.......       ...+..+++|++|.+++.++++    
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            35778999999999999999999999999999999997654322111       1235678999999999888774    


Q ss_pred             ---CccEEEEcCCCCC-----------CccchhhcHHHHHHHHH----HHHHcC-CCeEEEecccCC--CCCCCCcHHHH
Q 024290          148 ---GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQ----CAKAMG-IQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       148 ---~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~----a~~~~~-v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                         ++|+||||||...           ++..+++|+.+...+.+    .+++.+ .++||++||...  +.....+|+.+
T Consensus       490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aS  569 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAA  569 (676)
T ss_pred             hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHH
Confidence               6899999999432           12334577777665544    444444 358999998754  33345689999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWA  231 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g  231 (269)
                      |.+++.+++.       .|++++.|+|+.++.
T Consensus       570 KaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~  601 (676)
T TIGR02632       570 KAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQ  601 (676)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEECCceec
Confidence            9999988753       589999999999874

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.69  E-value=2.5e-16  Score=130.36  Aligned_cols=137  Identities=20%  Similarity=0.206  Sum_probs=108.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc---CccEEEEcCCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---GVHTVIDCATGRP  160 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~---~~d~vi~~ag~~~  160 (269)
                      |+++||||+|+||+++++.|+++ ++|++++|+..            .+++|++|.++++++++   ++|+||||+|...
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~   67 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVH   67 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCC
Confidence            47999999999999999999999 99999999642            36899999999988775   6899999998422


Q ss_pred             -----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH------hcCC
Q 024290          161 -----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ------DSGL  219 (269)
Q Consensus       161 -----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~------~~gi  219 (269)
                                 +...+++|+.++.++++++...  +.++|+++||....  ......|+.+|.+++.+.+      ..|+
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~gi  147 (199)
T PRK07578         68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALELPRGI  147 (199)
T ss_pred             CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHccCCe
Confidence                       2233567888888888887542  33589999986642  3344679999999987764      2589


Q ss_pred             CEEEEEcCcccccC
Q 024290          220 PHVIIRLWPYWAIC  233 (269)
Q Consensus       220 ~~~ilrp~~i~g~~  233 (269)
                      +++.++||++-+++
T Consensus       148 ~v~~i~Pg~v~t~~  161 (199)
T PRK07578        148 RINVVSPTVLTESL  161 (199)
T ss_pred             EEEEEcCCcccCch
Confidence            99999999987664

>PRK05599 hypothetical protein; Provisional

Probab=99.69  E-value=1.6e-16  Score=136.11  Aligned_cols=149  Identities=19%  Similarity=0.143  Sum_probs=109.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---ccC---CCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RDW---GATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~---~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      |+++||||+++||++++++|+ +|++|++++|+.++..+..   ++.   .+.++.+|+.|++++++++       +++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999998 5999999999865543321   111   3678899999999887765       3689


Q ss_pred             EEEEcCCCCCC-----------ccchhhcHHHHHHHH----HHHHHcC-CCeEEEecccCCC--CCCCCcHHHHHHHHHH
Q 024290          151 TVIDCATGRPE-----------EPIKKVDWEGKVALI----QCAKAMG-IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       151 ~vi~~ag~~~~-----------~~~~~~n~~~~~~li----~a~~~~~-v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~  212 (269)
                      ++|||+|....           ....++|+.+...++    +.+++.+ -++||++||....  ......|+.+|.+++.
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~  159 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDA  159 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHH
Confidence            99999995311           122346666665444    4444443 3689999997542  2345679999999987


Q ss_pred             HHH-------hcCCCEEEEEcCcccccC
Q 024290          213 FLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       213 ~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +.+       ..|++++.+.||.+.+++
T Consensus       160 ~~~~la~el~~~~I~v~~v~PG~v~T~~  187 (246)
T PRK05599        160 FCQGLADSLHGSHVRLIIARPGFVIGSM  187 (246)
T ss_pred             HHHHHHHHhcCCCceEEEecCCcccchh
Confidence            764       268999999999998865

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.69  E-value=2.8e-16  Score=135.37  Aligned_cols=155  Identities=15%  Similarity=0.103  Sum_probs=114.2

Q ss_pred             CCCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEeCCC-CC-Ccccccc--CCCEEEEcCCCCCCcHHHHh-------
Q 024290           80 PVRPTSILVVGA--TGTLGRQIVRRALDEGYDVRCLVRPR-PA-PADFLRD--WGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        80 ~~~~~~vlVtGa--tG~iG~~l~~~Ll~~G~~V~~~~R~~-~~-~~~~~~~--~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      .+.+|+++||||  +++||.++++.|+++|++|++++|+. ++ ..+...+  ..+.++.+|++|++++++++       
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   83 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV   83 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence            367799999999  89999999999999999999998864 22 1221111  14678999999999887765       


Q ss_pred             cCccEEEEcCCCCCC---------------ccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCCC-CCCCcHHHHHH
Q 024290          147 VGVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK-HPEVPLMEIKY  208 (269)
Q Consensus       147 ~~~d~vi~~ag~~~~---------------~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~~-~~~~~y~~sK~  208 (269)
                      .++|++|||||....               +..+++|+.+...+.+++...  .-+++|++|+.+... .....|+.+|.
T Consensus        84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~~~~~~~Y~asKa  163 (256)
T PRK07889         84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVAWPAYDWMGVAKA  163 (256)
T ss_pred             CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccccCCccchhHHHHH
Confidence            368999999995321               123568888887777766432  225899988654322 23356899999


Q ss_pred             HHHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+       ..|++++.|.||.+.+++.
T Consensus       164 al~~l~~~la~el~~~gIrvn~v~PG~v~T~~~  196 (256)
T PRK07889        164 ALESTNRYLARDLGPRGIRVNLVAAGPIRTLAA  196 (256)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEeeccCcccChhh
Confidence            9987764       3689999999999988753

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.69  E-value=2.5e-16  Score=136.05  Aligned_cols=153  Identities=16%  Similarity=0.142  Sum_probs=112.9

Q ss_pred             CCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEeCCC---CCCccccccC-CCEEEEcCCCCCCcHHHHh-------c
Q 024290           81 VRPTSILVVGA--TGTLGRQIVRRALDEGYDVRCLVRPR---PAPADFLRDW-GATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        81 ~~~~~vlVtGa--tG~iG~~l~~~Ll~~G~~V~~~~R~~---~~~~~~~~~~-~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      +++|+++||||  +++||+++++.|+++|++|++.+|..   +...+...+. ....+++|++|++++++++       .
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            56789999996  68999999999999999999886532   2222211111 2346889999999998776       4


Q ss_pred             CccEEEEcCCCCCC----------------ccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHHH
Q 024290          148 GVHTVIDCATGRPE----------------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIK  207 (269)
Q Consensus       148 ~~d~vi~~ag~~~~----------------~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~sK  207 (269)
                      ++|++|||||....                +..+++|+.+...+.+++...  +-++||++||....  ......|+.+|
T Consensus        84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~asK  163 (260)
T PRK06997         84 GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAK  163 (260)
T ss_pred             CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHHHHH
Confidence            68999999985211                123568888888777776543  23589999987652  23345799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .+++.+.+.       .|++++.|.||.+.++.
T Consensus       164 aal~~l~~~la~el~~~gIrVn~i~PG~v~T~~  196 (260)
T PRK06997        164 ASLEASVRYLAVSLGPKGIRANGISAGPIKTLA  196 (260)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCccccch
Confidence            999887642       68999999999997754

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=1.7e-16  Score=147.36  Aligned_cols=154  Identities=18%  Similarity=0.181  Sum_probs=119.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC--CccccccCCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA--PADFLRDWGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      .+.+++++||||+|+||.++++.|+++|++|++++|+...  ..+...+.+..++.+|++|.+++.++++       ++|
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence            4678999999999999999999999999999999885321  2222233456788999999988877663       589


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHcCC----CeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAMGI----QKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~~v----~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      +||||+|...           ++..+++|+.++.++.+++.....    ++||++||...  .......|+.+|.+++.+
T Consensus       287 ~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~  366 (450)
T PRK08261        287 IVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGL  366 (450)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHHH
Confidence            9999999432           234566899999999999876432    68999998754  344557899999988776


Q ss_pred             HH-------hcCCCEEEEEcCcccccC
Q 024290          214 LQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       214 ~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      ++       ..+++++.+.||.+-...
T Consensus       367 ~~~la~el~~~gi~v~~v~PG~i~t~~  393 (450)
T PRK08261        367 VQALAPLLAERGITINAVAPGFIETQM  393 (450)
T ss_pred             HHHHHHHHhhhCcEEEEEEeCcCcchh
Confidence            53       368999999999987654

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.68  E-value=3.7e-16  Score=125.54  Aligned_cols=147  Identities=19%  Similarity=0.255  Sum_probs=113.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccc------cc--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF------LR--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~------~~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      ++++|+||+|+||.++++.|+++|+ .|++++|+.+.....      +.  ..++.++.+|+++++++.++++       
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999996 688888875443221      11  1245678999999888877653       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~  214 (269)
                      .+|.|||++|...           ++..+++|+.++.++++++++.+.+++|++||...  +......|+.+|..++.++
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~  160 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQANYAAANAFLDALA  160 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchhhHHHHHHHHHHH
Confidence            4799999998421           23456789999999999998888889999998754  3345567999999999876


Q ss_pred             H---hcCCCEEEEEcCccc
Q 024290          215 Q---DSGLPHVIIRLWPYW  230 (269)
Q Consensus       215 ~---~~gi~~~ilrp~~i~  230 (269)
                      +   ..+++++.+.||.+-
T Consensus       161 ~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      161 AHRRARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHhcCCceEEEeecccc
Confidence            4   478999999998764

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.68  E-value=2.6e-16  Score=139.60  Aligned_cols=149  Identities=12%  Similarity=0.104  Sum_probs=108.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHh-------cC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATL-------VG  148 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~-------~~  148 (269)
                      ++++++||||+++||.++++.|+++| ++|++++|+.++..+...     ...+.++.+|++|.+++++++       .+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            46799999999999999999999999 999999997654322211     124677899999998887765       35


Q ss_pred             ccEEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcC--CCeEEEecccCCCC-------------
Q 024290          149 VHTVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMG--IQKYVFYSIHNCDK-------------  197 (269)
Q Consensus       149 ~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~--v~r~V~~SS~~~~~-------------  197 (269)
                      +|++|||||...            ++..+++|+.+...+++++    ++.+  .++||++||.....             
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            899999999521            1224568888877765554    3432  46999999875311             


Q ss_pred             ----------------------CCCCcHHHHHHHHHHHH----Hh----cCCCEEEEEcCccc
Q 024290          198 ----------------------HPEVPLMEIKYCTEQFL----QD----SGLPHVIIRLWPYW  230 (269)
Q Consensus       198 ----------------------~~~~~y~~sK~~~e~~~----~~----~gi~~~ilrp~~i~  230 (269)
                                            .+...|+.+|.+...+.    ++    .|+.++.++||++.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~  224 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIA  224 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCccc
Confidence                                  12245999999865543    22    47999999999984

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.66  E-value=6.7e-16  Score=161.00  Aligned_cols=152  Identities=22%  Similarity=0.257  Sum_probs=117.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC----CeEEEEeCCCCCCcc--ccc-------------cCCCEEEEcCCCCC----
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG----YDVRCLVRPRPAPAD--FLR-------------DWGATVVNADLSKP----  139 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G----~~V~~~~R~~~~~~~--~~~-------------~~~~~~i~~Dl~d~----  139 (269)
                      .++|+|||||||+|.++++.|++++    ++|+++.|.......  .+.             ..+++++.+|+.++    
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999887    899999997432211  000             12578899999754    


Q ss_pred             --CcHHHHhcCccEEEEcCCCCC----CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC----------------
Q 024290          140 --ETIPATLVGVHTVIDCATGRP----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK----------------  197 (269)
Q Consensus       140 --~~l~~~~~~~d~vi~~ag~~~----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~----------------  197 (269)
                        +.+.++..++|+|||||+...    ...+...|+.++.+++++|++.++++|+|+||.++..                
T Consensus      1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~ 1130 (1389)
T TIGR03443      1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGG 1130 (1389)
T ss_pred             CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccC
Confidence              345566678999999998432    2334457999999999999999999999999964310                


Q ss_pred             --------------CCCCcHHHHHHHHHHHHHh---cCCCEEEEEcCcccccCc
Q 024290          198 --------------HPEVPLMEIKYCTEQFLQD---SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       198 --------------~~~~~y~~sK~~~e~~~~~---~gi~~~ilrp~~i~g~~~  234 (269)
                                    .+..+|+.+|+..|.++..   .|++++++|||.+||+..
T Consensus      1131 ~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~ 1184 (1389)
T TIGR03443      1131 AGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSK 1184 (1389)
T ss_pred             CCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCC
Confidence                          0124599999999998854   589999999999999753

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.66  E-value=9.9e-16  Score=120.96  Aligned_cols=157  Identities=22%  Similarity=0.233  Sum_probs=130.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .|.+|.++|.||||-.|+.+.+++++.+  -.|+++.|+..-  .-.....+.....|....+++...+++.|+.|.+.|
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~--d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLg   92 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP--DPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALG   92 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC--CccccceeeeEEechHHHHHHHhhhcCCceEEEeec
Confidence            4778899999999999999999999998  489999987421  111223466677898888888888999999999987


Q ss_pred             C----CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCC-EEEEEcCccccc
Q 024290          158 G----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLP-HVIIRLWPYWAI  232 (269)
Q Consensus       158 ~----~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~-~~ilrp~~i~g~  232 (269)
                      .    ...+-++.++-+-...+.+++++.|+++|+.+||.++.....-.|...|.++|+-+.+.+++ ++|+|||.+.+.
T Consensus        93 TTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrFlY~k~KGEvE~~v~eL~F~~~~i~RPG~ll~~  172 (238)
T KOG4039|consen   93 TTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRFLYMKMKGEVERDVIELDFKHIIILRPGPLLGE  172 (238)
T ss_pred             ccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcccceeeeeccchhhhhhhhccccEEEEecCcceecc
Confidence            3    23466778888888899999999999999999999998888889999999999999888775 889999999986


Q ss_pred             Cccccc
Q 024290          233 CSTYTR  238 (269)
Q Consensus       233 ~~~~~~  238 (269)
                      -.....
T Consensus       173 R~esr~  178 (238)
T KOG4039|consen  173 RTESRQ  178 (238)
T ss_pred             cccccc
Confidence            554433

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.66  E-value=2.4e-15  Score=127.54  Aligned_cols=149  Identities=14%  Similarity=0.099  Sum_probs=107.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH---hcCccEEEEcCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---LVGVHTVIDCATG  158 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~---~~~~d~vi~~ag~  158 (269)
                      |+|+||||+|+||++++++|+++|  +.|++..|+....   ....++.++++|++|.++++++   ++++|+||||+|.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~   77 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGM   77 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcc
Confidence            589999999999999999999985  5666666643321   2234678899999999887665   4578999999995


Q ss_pred             CCC-----------------ccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--C---CCCCCcHHHHHHHHHH
Q 024290          159 RPE-----------------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--D---KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       159 ~~~-----------------~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~---~~~~~~y~~sK~~~e~  212 (269)
                      ...                 ...+++|+.+...+++.+.    +.+.++++++||...  .   ..+...|+.+|++++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~  157 (235)
T PRK09009         78 LHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNM  157 (235)
T ss_pred             ccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHH
Confidence            321                 1234577777766666553    334568999987432  1   1234579999999998


Q ss_pred             HHHh---------cCCCEEEEEcCcccccCcc
Q 024290          213 FLQD---------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       213 ~~~~---------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +++.         .+++++.+.||.+.+++..
T Consensus       158 ~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~  189 (235)
T PRK09009        158 FLKTLSIEWQRSLKHGVVLALHPGTTDTALSK  189 (235)
T ss_pred             HHHHHHHHhhcccCCeEEEEEcccceecCCCc
Confidence            7642         4788999999999887643

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.65  E-value=3.9e-16  Score=126.76  Aligned_cols=153  Identities=16%  Similarity=0.134  Sum_probs=122.1

Q ss_pred             CCCEEEEECC-CcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh--------cCccEE
Q 024290           82 RPTSILVVGA-TGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL--------VGVHTV  152 (269)
Q Consensus        82 ~~~~vlVtGa-tG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~--------~~~d~v  152 (269)
                      ..|+|+|||+ .|+||.+|+++|.++|+.|++..|+.+...++..+.++...+.|+++++++.+..        +.+|++
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            3578999985 4999999999999999999999999887777666778999999999999987765        357999


Q ss_pred             EEcCCCC-----------CCccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH
Q 024290          153 IDCATGR-----------PEEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       153 i~~ag~~-----------~~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~  215 (269)
                      |||||..           .-+..+++|+-|..++.++..    +++ +.||+++|...  +......|.++|+++..|.+
T Consensus        86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~  164 (289)
T KOG1209|consen   86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGVVPFPFGSIYSASKAAIHAYAR  164 (289)
T ss_pred             EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEEeccchhhhhhHHHHHHHHhhh
Confidence            9999932           124567788888766666553    332 58999999764  45556789999999988864


Q ss_pred             h-------cCCCEEEEEcCcccccCcc
Q 024290          216 D-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .       .|++++.+-+|.+-.+...
T Consensus       165 tLrlEl~PFgv~Vin~itGGv~T~Ia~  191 (289)
T KOG1209|consen  165 TLRLELKPFGVRVINAITGGVATDIAD  191 (289)
T ss_pred             hcEEeeeccccEEEEecccceeccccc
Confidence            3       7999999999999876544

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.65  E-value=1.9e-15  Score=133.18  Aligned_cols=155  Identities=14%  Similarity=0.058  Sum_probs=109.3

Q ss_pred             CCCCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc--------------cc----CCCEEEEcCC--
Q 024290           79 TPVRPTSILVVGA--TGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL--------------RD----WGATVVNADL--  136 (269)
Q Consensus        79 ~~~~~~~vlVtGa--tG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--------------~~----~~~~~i~~Dl--  136 (269)
                      +++++|+++||||  +.+||.++++.|+++|++|++ .|+.+++.+..              ..    .....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            3488999999999  799999999999999999988 55433221110              00    0145778898  


Q ss_pred             CCCC------------------cHHHHh-------cCccEEEEcCCCC-------------CCccchhhcHHHHHHHHHH
Q 024290          137 SKPE------------------TIPATL-------VGVHTVIDCATGR-------------PEEPIKKVDWEGKVALIQC  178 (269)
Q Consensus       137 ~d~~------------------~l~~~~-------~~~d~vi~~ag~~-------------~~~~~~~~n~~~~~~li~a  178 (269)
                      .+++                  ++.+++       .++|++|||||..             .++..+++|+.+...+.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            4444                  455544       4689999999621             1234567888888877776


Q ss_pred             HHHc--CCCeEEEecccCCC-CCC-C-CcHHHHHHHHHHHHH-------h-cCCCEEEEEcCcccccCc
Q 024290          179 AKAM--GIQKYVFYSIHNCD-KHP-E-VPLMEIKYCTEQFLQ-------D-SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       179 ~~~~--~v~r~V~~SS~~~~-~~~-~-~~y~~sK~~~e~~~~-------~-~gi~~~ilrp~~i~g~~~  234 (269)
                      +...  .-++||++||.... ..+ . ..|+.+|.+++.+.+       . .|++++.|.||++.+++.
T Consensus       164 ~~p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~  232 (303)
T PLN02730        164 FGPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAA  232 (303)
T ss_pred             HHHHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchh
Confidence            6432  12699999987542 223 3 369999999998763       2 489999999999988754

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.65  E-value=3.9e-16  Score=134.34  Aligned_cols=150  Identities=15%  Similarity=0.011  Sum_probs=110.8

Q ss_pred             EEEEECCCcHHHHHHHHHHHH----CCCeEEEEeCCCCCCcccc---c----cCCCEEEEcCCCCCCcHHHHhcC-----
Q 024290           85 SILVVGATGTLGRQIVRRALD----EGYDVRCLVRPRPAPADFL---R----DWGATVVNADLSKPETIPATLVG-----  148 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~----~G~~V~~~~R~~~~~~~~~---~----~~~~~~i~~Dl~d~~~l~~~~~~-----  148 (269)
                      .++||||+++||.+++++|++    +|++|++++|+.+...+..   .    ...+.++.+|++|.++++++++.     
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            589999999999999999997    7999999999865433221   1    12467889999999988776631     


Q ss_pred             ------ccEEEEcCCCCC-----C---------ccchhhcHHHHHHHHHHHH----Hc-C-CCeEEEecccCCC--CCCC
Q 024290          149 ------VHTVIDCATGRP-----E---------EPIKKVDWEGKVALIQCAK----AM-G-IQKYVFYSIHNCD--KHPE  200 (269)
Q Consensus       149 ------~d~vi~~ag~~~-----~---------~~~~~~n~~~~~~li~a~~----~~-~-v~r~V~~SS~~~~--~~~~  200 (269)
                            .|+||||||...     .         +..+++|+.++..+.+++.    +. + .++||++||....  ....
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence                  268999998421     0         1245688888777666553    32 2 3589999997642  2344


Q ss_pred             CcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          201 VPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       201 ~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ..|+.+|.+++.+.+.       .|++++.+.||++-+++.
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~  202 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQ  202 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHH
Confidence            6799999999987643       689999999999987653

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.64  E-value=1.4e-15  Score=147.78  Aligned_cols=131  Identities=13%  Similarity=0.133  Sum_probs=100.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~  158 (269)
                      ...|+||||||+||||++|++.|.++|++|...                   .+|++|.+.+...+.  ++|+|||||+.
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------~~~l~d~~~v~~~i~~~~pd~Vih~Aa~  438 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------KGRLEDRSSLLADIRNVKPTHVFNAAGV  438 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------ccccccHHHHHHHHHhhCCCEEEECCcc
Confidence            345789999999999999999999999987311                   246777888877775  68999999984


Q ss_pred             C----------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC----------------CC---CC-CCcHHHHHH
Q 024290          159 R----------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC----------------DK---HP-EVPLMEIKY  208 (269)
Q Consensus       159 ~----------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~----------------~~---~~-~~~y~~sK~  208 (269)
                      .          .+...+++|+.++.+|+++|++.|++ +|++||..+                +.   .+ .++|+.+|.
T Consensus       439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~  517 (668)
T PLN02260        439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKA  517 (668)
T ss_pred             cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHH
Confidence            3          12345679999999999999999985 555555321                00   11 267999999


Q ss_pred             HHHHHHHhcCCCEEEEEcCccccc
Q 024290          209 CTEQFLQDSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       209 ~~e~~~~~~gi~~~ilrp~~i~g~  232 (269)
                      +.|++++.+ -++.++|+.++|+.
T Consensus       518 ~~E~~~~~~-~~~~~~r~~~~~~~  540 (668)
T PLN02260        518 MVEELLREY-DNVCTLRVRMPISS  540 (668)
T ss_pred             HHHHHHHhh-hhheEEEEEEeccc
Confidence            999999876 46788888888853

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.61  E-value=4.8e-15  Score=118.92  Aligned_cols=158  Identities=15%  Similarity=0.073  Sum_probs=120.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC----CCEEEEcCCCCCCcHHHHh-------cCc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW----GATVVNADLSKPETIPATL-------VGV  149 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~----~~~~i~~Dl~d~~~l~~~~-------~~~  149 (269)
                      ++.|..+||||+.+||+++++.|.+.|++|.+.+++.....+...+.    +-..+.||+.++++++..+       ..+
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            55688999999999999999999999999999999866544333322    3456899999998887755       358


Q ss_pred             cEEEEcCCC-----------CCCccchhhcHHHHHHHHHHHHHc----C--CCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          150 HTVIDCATG-----------RPEEPIKKVDWEGKVALIQCAKAM----G--IQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       150 d~vi~~ag~-----------~~~~~~~~~n~~~~~~li~a~~~~----~--v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++++||||.           .+|+..+.+|+.|+..+.+++.+.    +  ..+||++||+-.  .+.....|.++|..+
T Consensus        92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~Gv  171 (256)
T KOG1200|consen   92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGV  171 (256)
T ss_pred             cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCce
Confidence            999999994           336677789999988877776443    2  238999999853  455567788888544


Q ss_pred             H-------HHHHhcCCCEEEEEcCcccccCccccc
Q 024290          211 E-------QFLQDSGLPHVIIRLWPYWAICSTYTR  238 (269)
Q Consensus       211 e-------~~~~~~gi~~~ilrp~~i~g~~~~~~~  238 (269)
                      -       +.+...+|+++.+.||+|-.|+..-.+
T Consensus       172 IgftktaArEla~knIrvN~VlPGFI~tpMT~~mp  206 (256)
T KOG1200|consen  172 IGFTKTAARELARKNIRVNVVLPGFIATPMTEAMP  206 (256)
T ss_pred             eeeeHHHHHHHhhcCceEeEeccccccChhhhhcC
Confidence            3       334558999999999999988765443

>PLN00015 protochlorophyllide reductase

Probab=99.61  E-value=1.9e-15  Score=133.71  Aligned_cols=147  Identities=13%  Similarity=0.104  Sum_probs=106.0

Q ss_pred             EEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHh-------cCccEEE
Q 024290           87 LVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATL-------VGVHTVI  153 (269)
Q Consensus        87 lVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~-------~~~d~vi  153 (269)
                      +||||+++||.+++++|+++| ++|++.+|+.++..+...     ...+.++.+|++|.+++.+++       .++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 999999997654322211     124677899999999887765       3589999


Q ss_pred             EcCCCCC------------CccchhhcHHHHHHHHHHH----HHcC--CCeEEEecccCCCC------------------
Q 024290          154 DCATGRP------------EEPIKKVDWEGKVALIQCA----KAMG--IQKYVFYSIHNCDK------------------  197 (269)
Q Consensus       154 ~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~--v~r~V~~SS~~~~~------------------  197 (269)
                      ||||...            ++..+++|+.++..+++++    ++.+  .++||++||.....                  
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            9999521            1235678888877765554    4444  46999999975310                  


Q ss_pred             -------------------CCCCcHHHHHHHHHHHH----Hh----cCCCEEEEEcCccc-ccC
Q 024290          198 -------------------HPEVPLMEIKYCTEQFL----QD----SGLPHVIIRLWPYW-AIC  233 (269)
Q Consensus       198 -------------------~~~~~y~~sK~~~e~~~----~~----~gi~~~ilrp~~i~-g~~  233 (269)
                                         .+...|+.+|.+.+.+.    ++    .|+.++.++||++. .++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~  224 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGL  224 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccc
Confidence                               01235999999855442    22    47999999999994 443

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.60  E-value=8.7e-15  Score=125.84  Aligned_cols=154  Identities=15%  Similarity=0.187  Sum_probs=119.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---ccCCCEEEEcCCCCCCcHHHHh---------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RDWGATVVNADLSKPETIPATL---------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~~~~~i~~Dl~d~~~l~~~~---------~  147 (269)
                      +...|-|+|||.-.+.|..+|++|.++|+.|++-.-.++....+.   .......++.|++++++++++.         +
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            356688999999999999999999999999999886544322221   1346788899999999998886         2


Q ss_pred             CccEEEEcCCCC------------CCccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 GVHTVIDCATGR------------PEEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 ~~d~vi~~ag~~------------~~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      +.-.||||||..            +.....++|+.|+..+.+++    +++. +|+|++||...  ..+...+|+.||++
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~~g~Y~~SK~a  184 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPALGPYCVSKFA  184 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCcccccchhhHHH
Confidence            578999999931            12345679999977766665    4443 69999999876  33456789999999


Q ss_pred             HHHHH-------HhcCCCEEEEEcCcccccCc
Q 024290          210 TEQFL-------QDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~-------~~~gi~~~ilrp~~i~g~~~  234 (269)
                      +|.+.       +..|+++.+|-||.+-.+..
T Consensus       185 Veaf~D~lR~EL~~fGV~VsiiePG~f~T~l~  216 (322)
T KOG1610|consen  185 VEAFSDSLRRELRPFGVKVSIIEPGFFKTNLA  216 (322)
T ss_pred             HHHHHHHHHHHHHhcCcEEEEeccCccccccC
Confidence            99774       34899999999997766654

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.60  E-value=5.6e-15  Score=119.52  Aligned_cols=153  Identities=12%  Similarity=0.054  Sum_probs=117.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHHhc-------CccE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV-------GVHT  151 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~~-------~~d~  151 (269)
                      .+.+.+||||||+.+||.+++++|.+.|-+|++.+|+.+.+.+.... +.+....||+.|.+.++++++       ..++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv   81 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence            35678999999999999999999999999999999997776654433 357788999999988777653       4799


Q ss_pred             EEEcCCCCCC-------------ccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          152 VIDCATGRPE-------------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       152 vi~~ag~~~~-------------~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      +|||||....             ++..++|+.++.+|..++..    ..-..||.+||.-+  +......|+.+|+++-.
T Consensus        82 liNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHs  161 (245)
T COG3967          82 LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHS  161 (245)
T ss_pred             eeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHH
Confidence            9999994321             23345788888777766643    33347999998643  33334459999998876


Q ss_pred             HH-------HhcCCCEEEEEcCccccc
Q 024290          213 FL-------QDSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       213 ~~-------~~~gi~~~ilrp~~i~g~  232 (269)
                      |.       +..+++++-+-|+.+-..
T Consensus       162 yt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         162 YTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHhhhcceEEEEecCCceecC
Confidence            53       447899999999998875

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.58  E-value=1.2e-14  Score=119.45  Aligned_cols=153  Identities=16%  Similarity=0.107  Sum_probs=115.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc------ccccCCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD------FLRDWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+.+|.+++||+.|+||.++.++|+++|..+.++..+.++++.      ......+.++++|+++..+++++++      
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f   81 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF   81 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999988888776665432      2223358899999999999988874      


Q ss_pred             -CccEEEEcCCCC---CCccchhhcHHH----HHHHHHHHHHcC---CCeEEEecccCC-CCCC-CCcHHHHHHHHH---
Q 024290          148 -GVHTVIDCATGR---PEEPIKKVDWEG----KVALIQCAKAMG---IQKYVFYSIHNC-DKHP-EVPLMEIKYCTE---  211 (269)
Q Consensus       148 -~~d~vi~~ag~~---~~~~~~~~n~~~----~~~li~a~~~~~---v~r~V~~SS~~~-~~~~-~~~y~~sK~~~e---  211 (269)
                       .+|++||+||..   +++..+.+|+.|    +...++++.+..   .+-+|++||... ++.| ...|+++|+.+-   
T Consensus        82 g~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFT  161 (261)
T KOG4169|consen   82 GTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFT  161 (261)
T ss_pred             CceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeee
Confidence             589999999964   455666788766    445666775442   247999999865 2223 345999997653   


Q ss_pred             ------HHHHhcCCCEEEEEcCccccc
Q 024290          212 ------QFLQDSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       212 ------~~~~~~gi~~~ilrp~~i~g~  232 (269)
                            .+.++.|+++..++||.+...
T Consensus       162 RSla~~ayy~~sGV~~~avCPG~t~t~  188 (261)
T KOG4169|consen  162 RSLADLAYYQRSGVRFNAVCPGFTRTD  188 (261)
T ss_pred             hhhhhhhhHhhcCEEEEEECCCcchHH
Confidence                  455678999999999988654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.58  E-value=4.3e-15  Score=119.22  Aligned_cols=133  Identities=23%  Similarity=0.231  Sum_probs=102.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCC--CCCCccc---cc--cCCCEEEEcCCCCCCcHHHHh-------cC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVRP--RPAPADF---LR--DWGATVVNADLSKPETIPATL-------VG  148 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~--~~~~~~~---~~--~~~~~~i~~Dl~d~~~l~~~~-------~~  148 (269)
                      |+++||||+++||++++++|+++| +.|+++.|+  .+...+.   ++  ..++.++++|+++.+++++++       ..
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            579999999999999999999995 577888887  2222222   22  235788999999999888876       36


Q ss_pred             ccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 024290          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       149 ~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~  215 (269)
                      +|++|||+|....           +..+.+|+.+...+.+++...+-++||++||....  ......|+.+|.+++.+.+
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~  160 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQ  160 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCChhHHHHHHHHHHHHH
Confidence            8999999995432           23456788888888888877666799999987653  3344579999999998876


Q ss_pred             h
Q 024290          216 D  216 (269)
Q Consensus       216 ~  216 (269)
                      .
T Consensus       161 ~  161 (167)
T PF00106_consen  161 S  161 (167)
T ss_dssp             H
T ss_pred             H
Confidence            4

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.58  E-value=4.9e-14  Score=120.55  Aligned_cols=154  Identities=19%  Similarity=0.139  Sum_probs=111.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC--cccc--cc----CCCEEEEcCCCC-CCcHHHHh-----
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--ADFL--RD----WGATVVNADLSK-PETIPATL-----  146 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~--~~~~--~~----~~~~~i~~Dl~d-~~~l~~~~-----  146 (269)
                      +.+|+++||||+++||.++++.|+++|+.|+++.|+.+..  ....  ..    ..+.+..+|+++ .+++..++     
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            6778999999999999999999999999999888875531  1111  11    246677799998 77776665     


Q ss_pred             --cCccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCCCC-CC-CCcHHHHHHH
Q 024290          147 --VGVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK-HP-EVPLMEIKYC  209 (269)
Q Consensus       147 --~~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~~~-~~-~~~y~~sK~~  209 (269)
                        .++|++|||||...            ++..+++|+.+...+.+++.... -++||++||..... .+ ...|+.+|.+
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~~~~~~~~~Y~~sK~a  162 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGLGGPPGQAAYAASKAA  162 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhcCCCCCcchHHHHHHH
Confidence              35899999999532            22345688888777776433211 11999999987642 22 2689999999


Q ss_pred             HHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+       ..|++++.+.||.+..++.
T Consensus       163 l~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~  194 (251)
T COG1028         163 LIGLTKALALELAPRGIRVNAVAPGYIDTPMT  194 (251)
T ss_pred             HHHHHHHHHHHHhhhCcEEEEEEeccCCCcch
Confidence            987653       3689999999997665543

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.57  E-value=2.6e-14  Score=125.95  Aligned_cols=154  Identities=16%  Similarity=0.063  Sum_probs=114.8

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc-------ccCCCEEEEcCCCCCCcHHHHh-----
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-------RDWGATVVNADLSKPETIPATL-----  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-------~~~~~~~i~~Dl~d~~~l~~~~-----  146 (269)
                      ..+.+++++|||+|++||.++++.|+.+|.+|+...|+.++..+..       ....+.++++|+.+.+++.++.     
T Consensus        31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            3467799999999999999999999999999999999864332211       1235778999999999988775     


Q ss_pred             --cCccEEEEcCCCC---------CCccchhhcHHHHHHHH----HHHHHcCCCeEEEecccCC-C--------------
Q 024290          147 --VGVHTVIDCATGR---------PEEPIKKVDWEGKVALI----QCAKAMGIQKYVFYSIHNC-D--------------  196 (269)
Q Consensus       147 --~~~d~vi~~ag~~---------~~~~~~~~n~~~~~~li----~a~~~~~v~r~V~~SS~~~-~--------------  196 (269)
                        ...|++|||||..         ..+..+.+|..|...|.    +.++.....|||++||... .              
T Consensus       111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~  190 (314)
T KOG1208|consen  111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKL  190 (314)
T ss_pred             cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccC
Confidence              3579999999942         23556678988866654    4455554479999999652 0              


Q ss_pred             CCCCCcHHHHHHHHHHHHH----h--cCCCEEEEEcCccccc
Q 024290          197 KHPEVPLMEIKYCTEQFLQ----D--SGLPHVIIRLWPYWAI  232 (269)
Q Consensus       197 ~~~~~~y~~sK~~~e~~~~----~--~gi~~~ilrp~~i~g~  232 (269)
                      ......|+.+|.+...+.+    +  .|+.++.+.||.+.++
T Consensus       191 ~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~  232 (314)
T KOG1208|consen  191 YSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTT  232 (314)
T ss_pred             ccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccccc
Confidence            1111238999988765442    2  2899999999999887

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.57  E-value=2.5e-14  Score=117.50  Aligned_cols=155  Identities=17%  Similarity=0.123  Sum_probs=111.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeC-CCCCCcccc-----ccCCCEEEEcCCCCCCcHHHHh-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVR-PRPAPADFL-----RDWGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R-~~~~~~~~~-----~~~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      |.++.|+||||+.+||..|+++|++. |.++++..+ ++++..+.+     .+.++++++.|+++.+++.++.       
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            45577999999999999999999975 666666555 455533222     2457999999999998887775       


Q ss_pred             --cCccEEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCC-----------eEEEecccCC--
Q 024290          147 --VGVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQ-----------KYVFYSIHNC--  195 (269)
Q Consensus       147 --~~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~-----------r~V~~SS~~~--  195 (269)
                        +++|++|+|||...            +...+++|..++..+.+++    +++..+           .||++||...  
T Consensus        81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~  160 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI  160 (249)
T ss_pred             ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence              46899999999311            2245678877766554443    333222           6998987643  


Q ss_pred             ---CCCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          196 ---DKHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       196 ---~~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                         ...+...|..+|.++..+.++       .++-++.+.|||+-+.+..
T Consensus       161 ~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg  210 (249)
T KOG1611|consen  161 GGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG  210 (249)
T ss_pred             CCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC
Confidence               334456799999999988764       5677889999999876543

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.54  E-value=5.2e-14  Score=119.13  Aligned_cols=133  Identities=20%  Similarity=0.233  Sum_probs=105.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC--c--c-----ccccCCCEEEEcCCCCCCcHHHHhc--Ccc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--A--D-----FLRDWGATVVNADLSKPETIPATLV--GVH  150 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~--~--~-----~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d  150 (269)
                      ++|+.||||-||+-|++|++.|+++||+|.++.|+.+..  .  .     ...+..+.++.+|++|...+.++++  ..|
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            368899999999999999999999999999999874321  1  1     1122347889999999999999986  569


Q ss_pred             EEEEcCC-------CCCCccchhhcHHHHHHHHHHHHHcCC--CeEEEecccC-------------CCCCCCCcHHHHHH
Q 024290          151 TVIDCAT-------GRPEEPIKKVDWEGKVALIQCAKAMGI--QKYVFYSIHN-------------CDKHPEVPLMEIKY  208 (269)
Q Consensus       151 ~vi~~ag-------~~~~~~~~~~n~~~~~~li~a~~~~~v--~r~V~~SS~~-------------~~~~~~~~y~~sK~  208 (269)
                      -|+|+++       ...++...+++-.|+.+|+++.+-.+.  .||...||..             .+..|.+||+.+|.
T Consensus        81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKl  160 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL  160 (345)
T ss_pred             hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHH
Confidence            9999998       244566677889999999999998764  3788888752             25668899999998


Q ss_pred             HHHHHH
Q 024290          209 CTEQFL  214 (269)
Q Consensus       209 ~~e~~~  214 (269)
                      ..-...
T Consensus       161 Ya~W~t  166 (345)
T COG1089         161 YAYWIT  166 (345)
T ss_pred             HHHhee
Confidence            876554

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.51  E-value=2.2e-13  Score=119.98  Aligned_cols=154  Identities=12%  Similarity=0.043  Sum_probs=102.8

Q ss_pred             CCCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCC---------CCC--ccc-cccCC-------CEEEEcCCCC
Q 024290           80 PVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPR---------PAP--ADF-LRDWG-------ATVVNADLSK  138 (269)
Q Consensus        80 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~---------~~~--~~~-~~~~~-------~~~i~~Dl~d  138 (269)
                      .+++|+++|||++  .+||+++++.|+++|++|++.++.+         +..  ... ....+       +..+.+|+.+
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            5788999999995  8999999999999999999976531         000  000 00000       1112344444


Q ss_pred             CC------------------cHHHHh-------cCccEEEEcCCCCC-------------CccchhhcHHHHHHHHHHHH
Q 024290          139 PE------------------TIPATL-------VGVHTVIDCATGRP-------------EEPIKKVDWEGKVALIQCAK  180 (269)
Q Consensus       139 ~~------------------~l~~~~-------~~~d~vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~~  180 (269)
                      .+                  ++.+++       .++|++|||||...             ++..+++|+.+..++++++.
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~  164 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG  164 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            43                  233333       46899999997321             23445788888888887775


Q ss_pred             Hc--CCCeEEEecccCCC-CCCC-C-cHHHHHHHHHHHHH-------h-cCCCEEEEEcCcccccC
Q 024290          181 AM--GIQKYVFYSIHNCD-KHPE-V-PLMEIKYCTEQFLQ-------D-SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       181 ~~--~v~r~V~~SS~~~~-~~~~-~-~y~~sK~~~e~~~~-------~-~gi~~~ilrp~~i~g~~  233 (269)
                      ..  .-+++|+++|.... ..+. . .|+.+|.+++.+.+       . .|++++.|.||.+.+++
T Consensus       165 p~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~  230 (299)
T PRK06300        165 PIMNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRA  230 (299)
T ss_pred             HHhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChh
Confidence            43  12579999876542 2232 2 69999999987763       2 38999999999998765

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.50  E-value=1.4e-14  Score=114.33  Aligned_cols=155  Identities=15%  Similarity=0.083  Sum_probs=120.9

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC--CCEEEEcCCCCCCcHHHHhc---CccEEE
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATLV---GVHTVI  153 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~--~~~~i~~Dl~d~~~l~~~~~---~~d~vi  153 (269)
                      ..+.++.|++||+.-+||+.+++.|.+.|.+|+++.|++..+..+.++.  .++.+++|+.+-+.+.+++.   .+|.++
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLV   82 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLV   82 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhh
Confidence            3578899999999999999999999999999999999987766655433  27889999999888888775   469999


Q ss_pred             EcCCC-----------CCCccchhhcHHHHHHHHHHHH----HcC-CCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH
Q 024290          154 DCATG-----------RPEEPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       154 ~~ag~-----------~~~~~~~~~n~~~~~~li~a~~----~~~-v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~  215 (269)
                      ||||.           ...+..+++|+.+..++.+...    ..+ -+.||++||...  ....-..|+.+|.+.+.+.+
T Consensus        83 NNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk  162 (245)
T KOG1207|consen   83 NNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTK  162 (245)
T ss_pred             ccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHH
Confidence            99993           2244566788888777666632    222 247999999865  33445679999999987654


Q ss_pred             h-------cCCCEEEEEcCcccccC
Q 024290          216 D-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .       ..|+++.+.|..++..+
T Consensus       163 ~lAlELGp~kIRVNsVNPTVVmT~M  187 (245)
T KOG1207|consen  163 CLALELGPQKIRVNSVNPTVVMTDM  187 (245)
T ss_pred             HHHHhhCcceeEeeccCCeEEEecc
Confidence            3       56899999999998764

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.48  E-value=6.9e-14  Score=119.22  Aligned_cols=144  Identities=20%  Similarity=0.212  Sum_probs=109.0

Q ss_pred             CCC--cHHHHHHHHHHHHCCCeEEEEeCCCCCC----ccccccCCCEEEEcCCCCCCcHHHHh--------cCccEEEEc
Q 024290           90 GAT--GTLGRQIVRRALDEGYDVRCLVRPRPAP----ADFLRDWGATVVNADLSKPETIPATL--------VGVHTVIDC  155 (269)
Q Consensus        90 Gat--G~iG~~l~~~Ll~~G~~V~~~~R~~~~~----~~~~~~~~~~~i~~Dl~d~~~l~~~~--------~~~d~vi~~  155 (269)
                      |++  ++||+++++.|+++|++|++++|+.++.    .+..++.+..++++|++|++++++++        .++|++|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            566  9999999999999999999999987652    33334456778999999999888774        568999999


Q ss_pred             CCCCCC----cc-----------chhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH-
Q 024290          156 ATGRPE----EP-----------IKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ-  215 (269)
Q Consensus       156 ag~~~~----~~-----------~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~-  215 (269)
                      ++....    ..           .+++|+.+...+++++.+.  .-+++|++||...  .......|+.+|.+++.+.+ 
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~  160 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRS  160 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHH
Confidence            985432    22           3346666766666666332  1258999998754  23344579999999998764 


Q ss_pred             ------h-cCCCEEEEEcCcccccC
Q 024290          216 ------D-SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 ------~-~gi~~~ilrp~~i~g~~  233 (269)
                            . .||++++|.||.+.++.
T Consensus       161 lA~el~~~~gIrVN~V~pG~i~t~~  185 (241)
T PF13561_consen  161 LAKELAPKKGIRVNAVSPGPIETPM  185 (241)
T ss_dssp             HHHHHGGHGTEEEEEEEESSBSSHH
T ss_pred             HHHHhccccCeeeeeecccceeccc
Confidence                  3 69999999999999765

...

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.47  E-value=1.5e-13  Score=113.01  Aligned_cols=158  Identities=15%  Similarity=0.131  Sum_probs=124.1

Q ss_pred             CCCCCCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           75 MSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        75 ~~~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      ......++-.+.++.|+.||.|+++++...+.|+.|..+.|+..+....-....+.++.+|....+-+...+.++..++.
T Consensus        44 id~~~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e  123 (283)
T KOG4288|consen   44 IDDKQDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYE  123 (283)
T ss_pred             CcchhhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHH
Confidence            33334455467899999999999999999999999999999854322111222578888888877767777788899999


Q ss_pred             cCCCC-CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCC--CCcHHHHHHHHHHHH-HhcCCCEEEEEcCccc
Q 024290          155 CATGR-PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP--EVPLMEIKYCTEQFL-QDSGLPHVIIRLWPYW  230 (269)
Q Consensus       155 ~ag~~-~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~--~~~y~~sK~~~e~~~-~~~gi~~~ilrp~~i~  230 (269)
                      +++.. ....+..+|-....+-++++.++|+++|+|+|.......+  ...|...|.++|..+ +.++.+-+++|||++|
T Consensus       124 ~~ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~~~~~i~rGY~~gKR~AE~Ell~~~~~rgiilRPGFiy  203 (283)
T KOG4288|consen  124 MMGGFGNIILMDRINGTANINAVKAAAKAGVPRFVYISAHDFGLPPLIPRGYIEGKREAEAELLKKFRFRGIILRPGFIY  203 (283)
T ss_pred             HhcCccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcCCCCccchhhhccchHHHHHHHHhcCCCceeeccceee
Confidence            98854 4556667888888999999999999999999987663333  346999999999654 5688999999999999


Q ss_pred             cc
Q 024290          231 AI  232 (269)
Q Consensus       231 g~  232 (269)
                      |.
T Consensus       204 g~  205 (283)
T KOG4288|consen  204 GT  205 (283)
T ss_pred             cc
Confidence            96

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.47  E-value=9.3e-13  Score=120.20  Aligned_cols=154  Identities=23%  Similarity=0.255  Sum_probs=114.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeCCCCCC--cccc-------------cc-----CCCEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAP--ADFL-------------RD-----WGATVVNADLS  137 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G---~~V~~~~R~~~~~--~~~~-------------~~-----~~~~~i~~Dl~  137 (269)
                      ..+|+|+|||||||+|.-+++.|+..-   ..++++.|.....  .+.+             +.     ..+..+.||+.
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            678999999999999999999999753   4788888864321  1100             01     24778889998


Q ss_pred             CC------CcHHHHhcCccEEEEcCCCCCCc----cchhhcHHHHHHHHHHHHHc-CCCeEEEecccCCC----------
Q 024290          138 KP------ETIPATLVGVHTVIDCATGRPEE----PIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCD----------  196 (269)
Q Consensus       138 d~------~~l~~~~~~~d~vi~~ag~~~~~----~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~~~----------  196 (269)
                      ++      .++..+.+.+|+|||+|+....+    ....+|..|++++++.|++. +.+-+|++|+..+.          
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~  169 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKP  169 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccc
Confidence            65      34555668899999999953332    33458999999999999887 46789999986421          


Q ss_pred             --------------------------------CCCCCcHHHHHHHHHHHHHh--cCCCEEEEEcCcccccCc
Q 024290          197 --------------------------------KHPEVPLMEIKYCTEQFLQD--SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       197 --------------------------------~~~~~~y~~sK~~~e~~~~~--~gi~~~ilrp~~i~g~~~  234 (269)
                                                      ....+.|.-+|+..|.++.+  .+++.+|+||+.+...+.
T Consensus       170 y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~  241 (467)
T KOG1221|consen  170 YPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYK  241 (467)
T ss_pred             cCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceecccc
Confidence                                            11234478899999999865  689999999999876543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.44  E-value=3.9e-13  Score=114.73  Aligned_cols=130  Identities=16%  Similarity=0.083  Sum_probs=101.9

Q ss_pred             HHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc----CccEEEEcCCC---CCCccchhhcHHH
Q 024290           99 IVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV----GVHTVIDCATG---RPEEPIKKVDWEG  171 (269)
Q Consensus        99 l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~----~~d~vi~~ag~---~~~~~~~~~n~~~  171 (269)
                      +++.|+++|++|++++|+.++..      ..+++++|++|.+++.++++    ++|+||||||.   .+++..+++|+.+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~   74 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLG   74 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHH
Confidence            47889999999999999865431      13568999999999988875    58999999995   3355667899999


Q ss_pred             HHHHHHHHHHc--CCCeEEEecccCCC-----------------------------CCCCCcHHHHHHHHHHHHH-----
Q 024290          172 KVALIQCAKAM--GIQKYVFYSIHNCD-----------------------------KHPEVPLMEIKYCTEQFLQ-----  215 (269)
Q Consensus       172 ~~~li~a~~~~--~v~r~V~~SS~~~~-----------------------------~~~~~~y~~sK~~~e~~~~-----  215 (269)
                      +..+++++.+.  ..++||++||....                             .....+|+.+|.+++.+.+     
T Consensus        75 ~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~  154 (241)
T PRK12428         75 LRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQP  154 (241)
T ss_pred             HHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHH
Confidence            99999988653  23699999997542                             1234679999999886542     


Q ss_pred             ---hcCCCEEEEEcCcccccCc
Q 024290          216 ---DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ---~~gi~~~ilrp~~i~g~~~  234 (269)
                         ..|+++++|+||++.+++.
T Consensus       155 e~~~~girvn~v~PG~v~T~~~  176 (241)
T PRK12428        155 WFGARGIRVNCVAPGPVFTPIL  176 (241)
T ss_pred             hhhccCeEEEEeecCCccCccc
Confidence               3589999999999998864

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.40  E-value=1.2e-12  Score=140.31  Aligned_cols=152  Identities=11%  Similarity=0.055  Sum_probs=117.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCC----------------------------------------
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAP----------------------------------------  120 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~----------------------------------------  120 (269)
                      .++++|||||+++||.+++++|+++ |++|++++|++...                                        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            4689999999999999999999998 69999999972100                                        


Q ss_pred             ----c---c---ccccC--CCEEEEcCCCCCCcHHHHhc------CccEEEEcCCCCC-----------CccchhhcHHH
Q 024290          121 ----A---D---FLRDW--GATVVNADLSKPETIPATLV------GVHTVIDCATGRP-----------EEPIKKVDWEG  171 (269)
Q Consensus       121 ----~---~---~~~~~--~~~~i~~Dl~d~~~l~~~~~------~~d~vi~~ag~~~-----------~~~~~~~n~~~  171 (269)
                          .   +   .+...  .+.++.+|++|.+++.++++      ++|.||||||...           ++..+++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                0   0   00111  36788999999998887773      5899999999422           34567899999


Q ss_pred             HHHHHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHHh-----cCCCEEEEEcCcccccC
Q 024290          172 KVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQD-----SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       172 ~~~li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~~-----~gi~~~ilrp~~i~g~~  233 (269)
                      ..++++++.....++||++||...  +......|+.+|..++.+.+.     .+++++.+.||.+-+.+
T Consensus      2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtgm 2224 (2582)
T TIGR02813      2156 LLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGGM 2224 (2582)
T ss_pred             HHHHHHHHHHhCCCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCCc
Confidence            999999998877789999999864  334456799999988876532     36889999999887654

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.40  E-value=1.6e-12  Score=106.81  Aligned_cols=141  Identities=18%  Similarity=0.217  Sum_probs=108.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~---~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag  157 (269)
                      +|+|+|||++|.+|++|.+.+.+.|.   +.+..+..                .+|+++.++.+.+|+  +...|||+|+
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk----------------d~DLt~~a~t~~lF~~ekPthVIhlAA   64 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK----------------DADLTNLADTRALFESEKPTHVIHLAA   64 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc----------------cccccchHHHHHHHhccCCceeeehHh
Confidence            47899999999999999999999875   22222221                579999999999995  5789999986


Q ss_pred             --------CCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-----------------CCCC-CCcHHHHHHHHH
Q 024290          158 --------GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-----------------DKHP-EVPLMEIKYCTE  211 (269)
Q Consensus       158 --------~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-----------------~~~~-~~~y~~sK~~~e  211 (269)
                              ...+.+++..|+.-..|++..|.+.|++++|+..|...                 +..| ...|..+|..+.
T Consensus        65 mVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~id  144 (315)
T KOG1431|consen   65 MVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMID  144 (315)
T ss_pred             hhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHH
Confidence                    23456788889988999999999999999998766431                 1111 223788886554


Q ss_pred             ----HHHHhcCCCEEEEEcCcccccCcccccc
Q 024290          212 ----QFLQDSGLPHVIIRLWPYWAICSTYTRR  239 (269)
Q Consensus       212 ----~~~~~~gi~~~ilrp~~i~g~~~~~~~~  239 (269)
                          .|-.++|.+++.+-|.++||+.++|.++
T Consensus       145 v~n~aY~~qhg~~~tsviPtNvfGphDNfnpe  176 (315)
T KOG1431|consen  145 VQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPE  176 (315)
T ss_pred             HHHHHHHHHhCCceeeeccccccCCCCCCCcc
Confidence                4556799999999999999998887554

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.38  E-value=2.4e-12  Score=105.26  Aligned_cols=145  Identities=20%  Similarity=0.311  Sum_probs=101.2

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCC-CC--Ccc---ccccC--CCEEEEcCCCCCCcHHHHhc-------C
Q 024290           85 SILVVGATGTLGRQIVRRALDEG-YDVRCLVRPR-PA--PAD---FLRDW--GATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~-~~--~~~---~~~~~--~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      +++||||+|.||..+++.|+++| .+|+++.|+. ..  ..+   .++..  .+.++.+|++|++++.++++       .
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            58999999999999999999998 5899999982 11  111   12222  47788999999999999873       4


Q ss_pred             ccEEEEcCCCCCCcc-----------chhhcHHHHHHHHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHH-
Q 024290          149 VHTVIDCATGRPEEP-----------IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL-  214 (269)
Q Consensus       149 ~d~vi~~ag~~~~~~-----------~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~-  214 (269)
                      +|.|||++|...+..           .+...+.+..+|.++......+.||.+||...  +......|......++.+. 
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda~a~  161 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQSAYAAANAFLDALAR  161 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHHHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcchHhHHHHHHHHHHHHH
Confidence            689999999533222           22344677888988888888889999999763  4445667998888888766 


Q ss_pred             --HhcCCCEEEEEcCcc
Q 024290          215 --QDSGLPHVIIRLWPY  229 (269)
Q Consensus       215 --~~~gi~~~ilrp~~i  229 (269)
                        +..|.++..|..+.+
T Consensus       162 ~~~~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  162 QRRSRGLPAVSINWGAW  178 (181)
T ss_dssp             HHHHTTSEEEEEEE-EB
T ss_pred             HHHhCCCCEEEEEcccc
Confidence              447888888877654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.35  E-value=2.4e-12  Score=110.82  Aligned_cols=155  Identities=14%  Similarity=0.150  Sum_probs=112.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cC--CCEEEEcCCCCCCc----HHHHhcC--ccE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DW--GATVVNADLSKPET----IPATLVG--VHT  151 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~--~~~~i~~Dl~d~~~----l~~~~~~--~d~  151 (269)
                      +-.+|||||.+||++.+++|+++|++|++++|+.+++....+    +.  .+.++..|.++.+.    +.+.+.+  +.+
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            568999999999999999999999999999999887644322    22  37788999998876    3444444  568


Q ss_pred             EEEcCCCCC--C-----------ccchhhcHHHHHH----HHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          152 VIDCATGRP--E-----------EPIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       152 vi~~ag~~~--~-----------~~~~~~n~~~~~~----li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      +|||+|...  +           ..+..+|..++..    ++..+.+.+-+-||++||.+.  +.+....|+.+|..++.
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~~  209 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVDF  209 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHHH
Confidence            999999422  1           2344577766544    444455556668999998765  33334569999987765


Q ss_pred             HH-------HhcCCCEEEEEcCcccccCccccc
Q 024290          213 FL-------QDSGLPHVIIRLWPYWAICSTYTR  238 (269)
Q Consensus       213 ~~-------~~~gi~~~ilrp~~i~g~~~~~~~  238 (269)
                      +-       +..||.+-.+-|..+-+.+..+..
T Consensus       210 ~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~  242 (312)
T KOG1014|consen  210 FSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK  242 (312)
T ss_pred             HHHHHHHHHHhcCeEEEEeehhheeccccccCC
Confidence            43       447999999999999887665544

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.34  E-value=3.5e-12  Score=109.76  Aligned_cols=151  Identities=14%  Similarity=0.149  Sum_probs=115.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC-------CCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-------GATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~-------~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      .+|+|||++.+||.+++..+..+|++|+++.|+..+..+..+..       .+.+..+|+.|.+++...++       .+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            58999999999999999999999999999999876654433222       25577899988888877764       46


Q ss_pred             cEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc-----CCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          150 HTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM-----GIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       150 d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~-----~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      |.+|+|||..-           .+..+++|..++.+++.++..+     +.++|+.+||..+  +.....+|..+|.++.
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alr  193 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALR  193 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHH
Confidence            99999999421           2345679999999887776432     2448999998754  4556678988998776


Q ss_pred             HHH-------HhcCCCEEEEEcCcccccCc
Q 024290          212 QFL-------QDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~-------~~~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.       ...++.++..-|+.+..++.
T Consensus       194 gLa~~l~qE~i~~~v~Vt~~~P~~~~tpGf  223 (331)
T KOG1210|consen  194 GLAEALRQELIKYGVHVTLYYPPDTLTPGF  223 (331)
T ss_pred             HHHHHHHHHHhhcceEEEEEcCCCCCCCcc
Confidence            543       33789999999999988753

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.18  E-value=7.3e-12  Score=98.93  Aligned_cols=159  Identities=16%  Similarity=0.190  Sum_probs=118.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCC--CEEEEcCCCCCCcHHHHh-------cCccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPETIPATL-------VGVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~--~~~i~~Dl~d~~~l~~~~-------~~~d~  151 (269)
                      .++-..+||||..++|++.++.|.++|..|.+++-..++..+..++.+  +.+...|++.++++..++       .+.|+
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            345678999999999999999999999999999998777665555553  678899999999998876       36899


Q ss_pred             EEEcCCC-----------------CCCccchhhcHHHHHHHHHHHHH--------cCCCe--EEEecccCC--CCCCCCc
Q 024290          152 VIDCATG-----------------RPEEPIKKVDWEGKVALIQCAKA--------MGIQK--YVFYSIHNC--DKHPEVP  202 (269)
Q Consensus       152 vi~~ag~-----------------~~~~~~~~~n~~~~~~li~a~~~--------~~v~r--~V~~SS~~~--~~~~~~~  202 (269)
                      .+||||.                 .+....+++|+.|+.|+++....        .+.+|  +|+..|...  .......
T Consensus        87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaa  166 (260)
T KOG1199|consen   87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAA  166 (260)
T ss_pred             eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhh
Confidence            9999993                 12345677999999998876531        12234  555555543  2334567


Q ss_pred             HHHHHHHHHHH----HH---hcCCCEEEEEcCcccccCcccccc
Q 024290          203 LMEIKYCTEQF----LQ---DSGLPHVIIRLWPYWAICSTYTRR  239 (269)
Q Consensus       203 y~~sK~~~e~~----~~---~~gi~~~ilrp~~i~g~~~~~~~~  239 (269)
                      |.++|.++-.+    .+   ..||+++.+.||.+-.|+....++
T Consensus       167 ysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpe  210 (260)
T KOG1199|consen  167 YSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPE  210 (260)
T ss_pred             hhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhH
Confidence            99999776432    23   368999999999998886654443

>PRK06720 hypothetical protein; Provisional

Probab=99.17  E-value=1.4e-10  Score=93.69  Aligned_cols=79  Identities=14%  Similarity=0.100  Sum_probs=62.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---ccc--CCCEEEEcCCCCCCcHHHHh-------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      .+++|+++||||+++||.++++.|+++|++|++++|+.+...+.   +..  ....++.+|+++.+++.+++       .
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G   92 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS   92 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            36789999999999999999999999999999999875543221   111  13567899999998887754       4


Q ss_pred             CccEEEEcCCC
Q 024290          148 GVHTVIDCATG  158 (269)
Q Consensus       148 ~~d~vi~~ag~  158 (269)
                      ++|++|||||.
T Consensus        93 ~iDilVnnAG~  103 (169)
T PRK06720         93 RIDMLFQNAGL  103 (169)
T ss_pred             CCCEEEECCCc
Confidence            68999999994

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.11  E-value=2e-10  Score=93.47  Aligned_cols=130  Identities=15%  Similarity=0.157  Sum_probs=92.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      |+++||||+|++|. +++.|+++|++|++++|++++..+...    ...+..+.+|+.|.+++.++++       ++|.+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            47999999987765 999999999999999997654333221    1246778899999999988774       46777


Q ss_pred             EEcCCCCCCccchhhcHHHHHHHHHHHHHcCCC----eEEEe-cccCCCCCCCCcHHHHHHHHHHHHHhcCCCEEEEEcC
Q 024290          153 IDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQ----KYVFY-SIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLW  227 (269)
Q Consensus       153 i~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~----r~V~~-SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~  227 (269)
                      |+..           ...++.++..+|++.|++    +||++ +|...+  +       +...+.. .....+|-=|..|
T Consensus        80 v~~v-----------h~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~--~-------~~~~~~~-~~~~~~~~~i~lg  138 (177)
T PRK08309         80 VAWI-----------HSSAKDALSVVCRELDGSSETYRLFHVLGSAASD--P-------RIPSEKI-GPARCSYRRVILG  138 (177)
T ss_pred             EEec-----------cccchhhHHHHHHHHccCCCCceEEEEeCCcCCc--h-------hhhhhhh-hhcCCceEEEEEe
Confidence            7654           355778999999999998    88886 443321  1       2222222 2355678888888


Q ss_pred             cccccCcc
Q 024290          228 PYWAICST  235 (269)
Q Consensus       228 ~i~g~~~~  235 (269)
                      ++..+...
T Consensus       139 f~~~~~~~  146 (177)
T PRK08309        139 FVLEDTYS  146 (177)
T ss_pred             EEEeCCcc
Confidence            88776443

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.10  E-value=1.2e-09  Score=96.89  Aligned_cols=153  Identities=12%  Similarity=0.065  Sum_probs=106.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCc-cccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPA-DFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~-~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+|+||+|+|++|.||+.++..|+.++  .+++++++...... ..+.+........+.+|++++.+.++++|+||+++|
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG   85 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG   85 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence            567899999999999999999998665  68999998322111 111222223345567776777788999999999999


Q ss_pred             CCC-----CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC---------------CCCCCCcHHHHHHHHH---HHH
Q 024290          158 GRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC---------------DKHPEVPLMEIKYCTE---QFL  214 (269)
Q Consensus       158 ~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~---------------~~~~~~~y~~sK~~~e---~~~  214 (269)
                      ...     +.+.+..|....+++++++++.+++++|+++|-.+               ..++...||.+-...-   .++
T Consensus        86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r~~l  165 (321)
T PTZ00325         86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFV  165 (321)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHHHHH
Confidence            532     34667789999999999999999999999998542               1233445655422221   122


Q ss_pred             -HhcCCCEEEEEcCcccccCc
Q 024290          215 -QDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       215 -~~~gi~~~ilrp~~i~g~~~  234 (269)
                       +..+++...++ ++++|...
T Consensus       166 a~~l~v~~~~V~-~~VlGeHG  185 (321)
T PTZ00325        166 AEALGMNPYDVN-VPVVGGHS  185 (321)
T ss_pred             HHHhCcChhheE-EEEEeecC
Confidence             44677777776 77777643

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.05  E-value=4.6e-10  Score=93.61  Aligned_cols=130  Identities=18%  Similarity=0.229  Sum_probs=98.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-----ccccc------cCCCEEEEcCCCCCCcHHHHhc--Cc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-----ADFLR------DWGATVVNADLSKPETIPATLV--GV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-----~~~~~------~~~~~~i~~Dl~d~~~l~~~~~--~~  149 (269)
                      .|..||||-||.-|+.|++.|+.+||+|.++.|+.+..     ..+..      ........+|++|...+.+++.  ..
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP  107 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP  107 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence            45789999999999999999999999999999865432     11111      1236778899999999999885  45


Q ss_pred             cEEEEcCCC-------CCCccchhhcHHHHHHHHHHHHHcCCC---eEEEecccC-------------CCCCCCCcHHHH
Q 024290          150 HTVIDCATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQ---KYVFYSIHN-------------CDKHPEVPLMEI  206 (269)
Q Consensus       150 d~vi~~ag~-------~~~~~~~~~n~~~~~~li~a~~~~~v~---r~V~~SS~~-------------~~~~~~~~y~~s  206 (269)
                      +-|+|+|+.       .-++...+++..|+.+|+++.+..+..   ||...|+..             .+..|.+||+.+
T Consensus       108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~a  187 (376)
T KOG1372|consen  108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAA  187 (376)
T ss_pred             hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHh
Confidence            888999872       334556678889999999999887643   676667642             255678899999


Q ss_pred             HHHHHH
Q 024290          207 KYCTEQ  212 (269)
Q Consensus       207 K~~~e~  212 (269)
                      |...-.
T Consensus       188 Kmy~~W  193 (376)
T KOG1372|consen  188 KMYGYW  193 (376)
T ss_pred             hhhheE
Confidence            976643

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.01  E-value=5.7e-10  Score=93.36  Aligned_cols=152  Identities=18%  Similarity=0.137  Sum_probs=109.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-----eEEEEeCCCCCCcccc-------c--cCCCEEEEcCCCCCCcHHHHh-
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY-----DVRCLVRPRPAPADFL-------R--DWGATVVNADLSKPETIPATL-  146 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~-----~V~~~~R~~~~~~~~~-------~--~~~~~~i~~Dl~d~~~l~~~~-  146 (269)
                      +.|.++|||++++||.+|+.+|++...     ++++..|+-++.++..       .  ...++++.+|+++..++.++. 
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            457799999999999999999998653     4667788876544322       1  235889999999987776664 


Q ss_pred             ------cCccEEEEcCCCCC--------------------------------------CccchhhcHHHHHHHHHHHHHc
Q 024290          147 ------VGVHTVIDCATGRP--------------------------------------EEPIKKVDWEGKVALIQCAKAM  182 (269)
Q Consensus       147 ------~~~d~vi~~ag~~~--------------------------------------~~~~~~~n~~~~~~li~a~~~~  182 (269)
                            +..|.|+.|||..+                                      -..+++.|+-|...++......
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence                  46899999998322                                      1235667888887777766443


Q ss_pred             ----CCCeEEEecccCCCC-----------CCCCcHHHHHHHHHHHH-------HhcCCCEEEEEcCcccccC
Q 024290          183 ----GIQKYVFYSIHNCDK-----------HPEVPLMEIKYCTEQFL-------QDSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       183 ----~v~r~V~~SS~~~~~-----------~~~~~y~~sK~~~e~~~-------~~~gi~~~ilrp~~i~g~~  233 (269)
                          .-.++|++||..+..           ....||..+|+.++-+-       +..|+.-.++.||....+.
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~  234 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNS  234 (341)
T ss_pred             hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecch
Confidence                223899999976532           34578999999887432       2357777888898876653

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.97  E-value=6.5e-09  Score=86.25  Aligned_cols=147  Identities=15%  Similarity=0.184  Sum_probs=104.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEE-eCCCCCCccccccCCCEEEEcCCCCCCcHHHHh--cCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDE-GYDVRCL-VRPRPAPADFLRDWGATVVNADLSKPETIPATL--VGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~-~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~--~~~d~vi~~ag  157 (269)
                      ...+|||||+-|.+|..+++.|..+ |.+-+++ +...+ .+..+.  .-.++..|+.|...+++++  ..+|.+||..+
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KP-p~~V~~--~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSA  119 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKP-PANVTD--VGPYIYLDILDQKSLEEIVVNKRIDWLVHFSA  119 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCC-chhhcc--cCCchhhhhhccccHHHhhcccccceeeeHHH
Confidence            3468999999999999999988765 6544444 33211 111111  3356788999999999987  46899999764


Q ss_pred             ------CCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC--CCCCC------------CcHHHHHHHHHHH----
Q 024290          158 ------GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPE------------VPLMEIKYCTEQF----  213 (269)
Q Consensus       158 ------~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~--~~~~~------------~~y~~sK~~~e~~----  213 (269)
                            ..+-.....+|+.|..|+++.+++.+.+-| .-|++++  +..|.            .-||.+|..+|-+    
T Consensus       120 LLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iF-VPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~  198 (366)
T KOG2774|consen  120 LLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVF-VPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYF  198 (366)
T ss_pred             HHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEe-ecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHH
Confidence                  344445567999999999999999987444 4455553  22232            3499999877643    


Q ss_pred             HHhcCCCEEEEEcCccccc
Q 024290          214 LQDSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       214 ~~~~gi~~~ilrp~~i~g~  232 (269)
                      -.+.|+++-++|...++.+
T Consensus       199 ~hrFg~dfr~~rfPg~is~  217 (366)
T KOG2774|consen  199 NHRFGVDFRSMRFPGIISA  217 (366)
T ss_pred             HhhcCccceecccCccccc
Confidence            3458999999999888765

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.96  E-value=3.9e-10  Score=93.01  Aligned_cols=154  Identities=14%  Similarity=0.018  Sum_probs=102.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC--CCccccccC--CCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP--APADFLRDW--GATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~--~~~~~~~~~--~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      +.+.+||||++.+||..++..+.+++-+.....+...  ....+....  ......+|+++...+.+++       .+.|
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~   84 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRD   84 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCcee
Confidence            4567999999999999999999998866655544322  211111111  1223345555544444443       2469


Q ss_pred             EEEEcCCC--------------CCCccchhhcHHHHHHHHHHHHHc----C-CCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          151 TVIDCATG--------------RPEEPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       151 ~vi~~ag~--------------~~~~~~~~~n~~~~~~li~a~~~~----~-v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      .||||||.              ..|+.+++.|+.+...|.+.+.+.    . .+-+|++||...  +......|+.+|++
T Consensus        85 iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~KaA  164 (253)
T KOG1204|consen   85 IIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKAA  164 (253)
T ss_pred             EEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHHH
Confidence            99999992              124566778888877777665432    2 257999998764  44455679999999


Q ss_pred             HHHHHH-----hc-CCCEEEEEcCcccccCcc
Q 024290          210 TEQFLQ-----DS-GLPHVIIRLWPYWAICST  235 (269)
Q Consensus       210 ~e~~~~-----~~-gi~~~ilrp~~i~g~~~~  235 (269)
                      .+.|.+     +. ++.+..++||.+-+.+..
T Consensus       165 r~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~  196 (253)
T KOG1204|consen  165 RNMYFMVLASEEPFDVRVLNYAPGVVDTQMQV  196 (253)
T ss_pred             HHHHHHHHhhcCccceeEEEccCCcccchhHH
Confidence            998864     43 888999999999776543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.93  E-value=3.4e-09  Score=95.44  Aligned_cols=96  Identities=21%  Similarity=0.286  Sum_probs=76.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      ||+|+|.|+ |+||+.++..|+++| .+|++.+|+.++..+....  .+++.+++|+.|.+.+.+++++.|+|||++...
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~   79 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF   79 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence            578999997 999999999999999 9999999997765554322  378999999999999999999999999999732


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      .           ...++++|.++|+ .+|=+|
T Consensus        80 ~-----------~~~i~ka~i~~gv-~yvDts   99 (389)
T COG1748          80 V-----------DLTILKACIKTGV-DYVDTS   99 (389)
T ss_pred             h-----------hHHHHHHHHHhCC-CEEEcc
Confidence            1           1356777777775 444433

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.92  E-value=3.4e-08  Score=88.74  Aligned_cols=151  Identities=19%  Similarity=0.142  Sum_probs=97.7

Q ss_pred             CCCCEEEEECCCcHHHHH--HHHHHHHCCCeEEEEeCCCCC---------------CccccccCC--CEEEEcCCCCCCc
Q 024290           81 VRPTSILVVGATGTLGRQ--IVRRALDEGYDVRCLVRPRPA---------------PADFLRDWG--ATVVNADLSKPET  141 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~--l~~~Ll~~G~~V~~~~R~~~~---------------~~~~~~~~~--~~~i~~Dl~d~~~  141 (269)
                      ..+|++||||+++++|.+  +++.| ++|++|+++++..+.               ..+.++..+  +..+.+|++++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            346899999999999999  89999 999999998853321               111222333  5678999999988


Q ss_pred             HHHHh-------cCccEEEEcCCCCCCcc-----------------c----hh----------------------hcHHH
Q 024290          142 IPATL-------VGVHTVIDCATGRPEEP-----------------I----KK----------------------VDWEG  171 (269)
Q Consensus       142 l~~~~-------~~~d~vi~~ag~~~~~~-----------------~----~~----------------------~n~~~  171 (269)
                      +.+++       .++|+||||++......                 +    .+                      ++++|
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMg  197 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMG  197 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhc
Confidence            87775       46899999998431100                 0    00                      11222


Q ss_pred             HHH---HHHHHHHcC----CCeEEEecccCCCCC----CCCcHHHHHHHHHHHHH-------hcCCCEEEEEcCccccc
Q 024290          172 KVA---LIQCAKAMG----IQKYVFYSIHNCDKH----PEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       172 ~~~---li~a~~~~~----v~r~V~~SS~~~~~~----~~~~y~~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~  232 (269)
                      ...   =+++....+    -.++|-+|..+....    .....|.+|..+|...+       ..|++++++..+.+.+.
T Consensus       198 gedw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~  276 (398)
T PRK13656        198 GEDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQ  276 (398)
T ss_pred             cchHHHHHHHHHhcccccCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccch
Confidence            211   122333332    247777777654321    12356899999997653       26899999999888764

>PLN00106 malate dehydrogenase

Probab=98.87  E-value=2.3e-08  Score=88.72  Aligned_cols=148  Identities=11%  Similarity=0.023  Sum_probs=101.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCc-cccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPA-DFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~-~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      .+||+|+|++|.||..++..|+.++  .+++++++++.... ..+.+........++.+.+++.+.++++|+||++||..
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~   97 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVP   97 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCC
Confidence            4689999999999999999999776  48999998762111 11112122223345556667888999999999999942


Q ss_pred             -----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC---------------CCCCCCcHHHHHHHHHHH----HH
Q 024290          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC---------------DKHPEVPLMEIKYCTEQF----LQ  215 (269)
Q Consensus       160 -----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~---------------~~~~~~~y~~sK~~~e~~----~~  215 (269)
                           ...+....|....+++++.+++.+.+.+|+++|--+               ..++...||.++...+++    .+
T Consensus        98 ~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~  177 (323)
T PLN00106         98 RKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAE  177 (323)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHHHHHHH
Confidence                 344566789999999999999999999888887433               123344566665554432    24


Q ss_pred             hcCCCEEEEEcCcccc
Q 024290          216 DSGLPHVIIRLWPYWA  231 (269)
Q Consensus       216 ~~gi~~~ilrp~~i~g  231 (269)
                      ..+++...|. ++++|
T Consensus       178 ~lgv~~~~V~-~~ViG  192 (323)
T PLN00106        178 KKGLDPADVD-VPVVG  192 (323)
T ss_pred             HhCCChhheE-EEEEE
Confidence            5677666553 33444

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.76  E-value=7e-08  Score=85.98  Aligned_cols=149  Identities=11%  Similarity=0.090  Sum_probs=91.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEeCCCCC--CccccccC-C-CEEEEcCCCCCCcHHHHhcCccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG-------YDVRCLVRPRPA--PADFLRDW-G-ATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G-------~~V~~~~R~~~~--~~~~~~~~-~-~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      .||+||||+|++|++++..|+..+       .+|+++++++..  ......+. . ......|+....++.+.++++|+|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV   82 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA   82 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence            479999999999999999999854       589999996532  11100000 0 001223555567778889999999


Q ss_pred             EEcCCCCC-----CccchhhcHHHHHHHHHHHHHcC-CC-eEEEecccC----------CCCCCC-----CcHHHHHHHH
Q 024290          153 IDCATGRP-----EEPIKKVDWEGKVALIQCAKAMG-IQ-KYVFYSIHN----------CDKHPE-----VPLMEIKYCT  210 (269)
Q Consensus       153 i~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~-v~-r~V~~SS~~----------~~~~~~-----~~y~~sK~~~  210 (269)
                      ||+||...     ..+.++.|+.-.+.+.+.+++.. .. .+|.+|...          ....+.     ..+..+.+.-
T Consensus        83 I~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~~~ig~gt~LDs~R~r  162 (325)
T cd01336          83 ILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDHNRAK  162 (325)
T ss_pred             EEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCHHHEEeeehHHHHHHH
Confidence            99999422     24566788888888888887773 23 455555311          000010     0122333333


Q ss_pred             HHHHHhcCCCEEEEEcCccccc
Q 024290          211 EQFLQDSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       211 e~~~~~~gi~~~ilrp~~i~g~  232 (269)
                      ..+.+..+++...++-..++|.
T Consensus       163 ~~la~~l~v~~~~v~~~~V~Ge  184 (325)
T cd01336         163 SQIALKLGVPVSDVKNVIIWGN  184 (325)
T ss_pred             HHHHHHhCcChhhceEeEEEEc
Confidence            3344556777776666666675

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09620 hypothetical protein; Provisional

Probab=98.73  E-value=2.3e-08  Score=84.58  Aligned_cols=79  Identities=18%  Similarity=0.246  Sum_probs=54.8

Q ss_pred             CCCCEEEEECCC----------------cHHHHHHHHHHHHCCCeEEEEeCCCCCCccc-cccCCCEEEEcCCCCCCcHH
Q 024290           81 VRPTSILVVGAT----------------GTLGRQIVRRALDEGYDVRCLVRPRPAPADF-LRDWGATVVNADLSKPETIP  143 (269)
Q Consensus        81 ~~~~~vlVtGat----------------G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-~~~~~~~~i~~Dl~d~~~l~  143 (269)
                      |.+|+||||+|.                ||+|++|+++|+++|++|+++++........ ........+.+|....+.+.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~   80 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMK   80 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHH
Confidence            467899999775                9999999999999999999998743211111 11122334555333335677


Q ss_pred             HHhc--CccEEEEcCCCC
Q 024290          144 ATLV--GVHTVIDCATGR  159 (269)
Q Consensus       144 ~~~~--~~d~vi~~ag~~  159 (269)
                      +++.  ++|+|||+|+..
T Consensus        81 ~~~~~~~~D~VIH~AAvs   98 (229)
T PRK09620         81 SIITHEKVDAVIMAAAGS   98 (229)
T ss_pred             HHhcccCCCEEEECcccc
Confidence            7774  689999999953

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.64  E-value=4.7e-08  Score=80.73  Aligned_cols=78  Identities=19%  Similarity=0.263  Sum_probs=63.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      .+++++++|+||+|++|+.+++.|++.|++|++++|+.++..+...    ..+..+..+|+.+.+++.+++.++|+||++
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a  104 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA  104 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence            4678899999999999999999999999999999998654333222    124566778888888888999999999997


Q ss_pred             CC
Q 024290          156 AT  157 (269)
Q Consensus       156 ag  157 (269)
                      ..
T Consensus       105 t~  106 (194)
T cd01078         105 GA  106 (194)
T ss_pred             CC
Confidence            75

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK05086 malate dehydrogenase; Provisional

Probab=98.62  E-value=5e-07  Score=80.08  Aligned_cols=107  Identities=15%  Similarity=0.093  Sum_probs=76.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHH---CCCeEEEEeCCCCCCcc--ccccCC-CEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALD---EGYDVRCLVRPRPAPAD--FLRDWG-ATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~---~G~~V~~~~R~~~~~~~--~~~~~~-~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |||+|+||+|.+|++++..|..   .++++++++|++.....  .+.+.+ ...+.+  .+.+++.+.++++|+||.++|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG   78 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG   78 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence            6899999999999999988854   34688888886432110  111111 122333  234566677889999999999


Q ss_pred             CCC-----CccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          158 GRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       158 ~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      ...     ..+.+..|......+++++++.+.+++|.+.|
T Consensus        79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            532     23566788889999999999999988888876

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.60  E-value=8.6e-07  Score=73.58  Aligned_cols=151  Identities=15%  Similarity=0.195  Sum_probs=102.5

Q ss_pred             CCCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCCCCC----ccccccCC-CEEEEcCCCCCCcHHHHh------
Q 024290           80 PVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAP----ADFLRDWG-ATVVNADLSKPETIPATL------  146 (269)
Q Consensus        80 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~~~~----~~~~~~~~-~~~i~~Dl~d~~~l~~~~------  146 (269)
                      .|++|++||+|-.  ..|+..|++.|.++|.++......+ +.    .++.++.+ ..+++||+++.+++.++|      
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            4789999999954  6799999999999999999888764 32    22233333 457899999999998887      


Q ss_pred             -cCccEEEEcCCCCCCc----cchhhcHHH-----------HHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHH
Q 024290          147 -VGVHTVIDCATGRPEE----PIKKVDWEG-----------KVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEI  206 (269)
Q Consensus       147 -~~~d~vi~~ag~~~~~----~~~~~n~~~-----------~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~s  206 (269)
                       .++|.++|+.+..+.+    ++.++..++           ...+.++++..  +-+.+|-++=.+..  .+..+..+..
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMGvA  161 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGVA  161 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhHHH
Confidence             3689999999965422    333333222           23344444432  23456655543331  2334567899


Q ss_pred             HHHHHHHHH-------hcCCCEEEEEcCcccc
Q 024290          207 KYCTEQFLQ-------DSGLPHVIIRLWPYWA  231 (269)
Q Consensus       207 K~~~e~~~~-------~~gi~~~ilrp~~i~g  231 (269)
                      |+++|.-+|       ..|++++.|.-|.+-+
T Consensus       162 KAaLEasvRyLA~dlG~~gIRVNaISAGPIrT  193 (259)
T COG0623         162 KAALEASVRYLAADLGKEGIRVNAISAGPIRT  193 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEeeecccchHH
Confidence            999996443       2689999998887754

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.58  E-value=7.9e-08  Score=87.75  Aligned_cols=92  Identities=27%  Similarity=0.409  Sum_probs=68.0

Q ss_pred             EEEECCCcHHHHHHHHHHHHCC-C-eEEEEeCCCCCCccccc---cCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC
Q 024290           86 ILVVGATGTLGRQIVRRALDEG-Y-DVRCLVRPRPAPADFLR---DWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G-~-~V~~~~R~~~~~~~~~~---~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      |+|.|+ |++|+.+++.|++++ + +|++.+|+.++..+...   ..+++.+++|+.|.+++.+++++.|+||||++.. 
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~-   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF-   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc-
Confidence            789999 999999999999987 4 89999998776555443   3478999999999999999999999999999843 


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                                ....++++|.+.|+ ++|-.
T Consensus        79 ----------~~~~v~~~~i~~g~-~yvD~   97 (386)
T PF03435_consen   79 ----------FGEPVARACIEAGV-HYVDT   97 (386)
T ss_dssp             ----------GHHHHHHHHHHHT--EEEES
T ss_pred             ----------hhHHHHHHHHHhCC-Ceecc
Confidence                      11346666666665 55553

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.58  E-value=1.4e-07  Score=80.04  Aligned_cols=72  Identities=15%  Similarity=0.177  Sum_probs=50.4

Q ss_pred             EEE-CCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCC--CCcHHHHhcCccEEEEcCCCCC
Q 024290           87 LVV-GATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK--PETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        87 lVt-GatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d--~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      .|| .+||++|++|+++|+++|++|+++.|+.....  ....+++++.++..+  .+.+.+.++++|+||||||..+
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             eecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            444 57899999999999999999999987543211  112356666654322  2345566778999999999644

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.56  E-value=7.3e-07  Score=76.65  Aligned_cols=72  Identities=17%  Similarity=0.276  Sum_probs=56.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag  157 (269)
                      |+|||+||||. |+.|++.|.++|++|++..++...... +...+...+..+..|.+++.+++.  ++|+||+.+.
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~-~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH   74 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHL-YPIHQALTVHTGALDPQELREFLKRHSIDILVDATH   74 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccc-ccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence            57999999999 999999999999999999997654333 333344455566677777888884  5999999986

This enzyme was found to be a monomer by gel filtration.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.43  E-value=9.5e-07  Score=74.71  Aligned_cols=96  Identities=23%  Similarity=0.410  Sum_probs=73.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-cCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~~~  161 (269)
                      |+++|.|+ |.+|..+++.|.++|++|++++++++...+... +.....+.+|-+|++.|.++ ++++|+++-..+... 
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~-   78 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE-   78 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH-
Confidence            57899985 999999999999999999999998776655333 45789999999999999998 788999998887321 


Q ss_pred             ccchhhcHHHHHHHHHHH-HHcCCCeEEEe
Q 024290          162 EPIKKVDWEGKVALIQCA-KAMGIQKYVFY  190 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~-~~~~v~r~V~~  190 (269)
                           +|.    -+...+ +..|++++|--
T Consensus        79 -----~N~----i~~~la~~~~gv~~viar   99 (225)
T COG0569          79 -----VNS----VLALLALKEFGVPRVIAR   99 (225)
T ss_pred             -----HHH----HHHHHHHHhcCCCcEEEE
Confidence                 222    233333 44688776653

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.43  E-value=7.9e-07  Score=81.21  Aligned_cols=134  Identities=14%  Similarity=0.164  Sum_probs=83.7

Q ss_pred             CCCCCEEEEECC----------------CcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHH
Q 024290           80 PVRPTSILVVGA----------------TGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP  143 (269)
Q Consensus        80 ~~~~~~vlVtGa----------------tG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~  143 (269)
                      .+.+|+|+||||                +|.+|.+++++|.++|++|++++++.+ ...   ..+  +..+|+++.+++.
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~---~~~--~~~~dv~~~~~~~  258 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPT---PAG--VKRIDVESAQEML  258 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccC---CCC--cEEEccCCHHHHH
Confidence            478899999999                889999999999999999999998642 111   112  3467998887776


Q ss_pred             HHh----cCccEEEEcCCCCCCcc-------------chhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHH
Q 024290          144 ATL----VGVHTVIDCATGRPEEP-------------IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEI  206 (269)
Q Consensus       144 ~~~----~~~d~vi~~ag~~~~~~-------------~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~s  206 (269)
                      +++    +++|++|||||..+...             ...+.+.-+..++..+++...++-+.++-.. +..  ..    
T Consensus       259 ~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~~~~~~~VGFaa-Et~--~~----  331 (399)
T PRK05579        259 DAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPDILAEVAALKDKRPFVVGFAA-ETG--DV----  331 (399)
T ss_pred             HHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcHHHHHHHhccCCCCEEEEEcc-CCc--hH----
Confidence            665    46899999999432111             0112223344566666654322213333322 111  11    


Q ss_pred             HHHHHHHHHhcCCCEEEEEc
Q 024290          207 KYCTEQFLQDSGLPHVIIRL  226 (269)
Q Consensus       207 K~~~e~~~~~~gi~~~ilrp  226 (269)
                      ...+.+-+++.++++++...
T Consensus       332 ~~~A~~kl~~k~~D~ivaN~  351 (399)
T PRK05579        332 LEYARAKLKRKGLDLIVAND  351 (399)
T ss_pred             HHHHHHHHHHcCCeEEEEec
Confidence            22223345678899887765

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.33  E-value=4.9e-07  Score=79.33  Aligned_cols=74  Identities=19%  Similarity=0.370  Sum_probs=63.3

Q ss_pred             EEEEECCCcHHHHHHHHHHHH----CCCeEEEEeCCCCCCccccccC---------CCEEEEcCCCCCCcHHHHhcCccE
Q 024290           85 SILVVGATGTLGRQIVRRALD----EGYDVRCLVRPRPAPADFLRDW---------GATVVNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~----~G~~V~~~~R~~~~~~~~~~~~---------~~~~i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      -++|.||+||.|..++++++.    .|...-+..|++.++.+.++..         ...++.+|..|++++.+..+.+.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            489999999999999999999    7889999999987766554321         233788999999999999999999


Q ss_pred             EEEcCCC
Q 024290          152 VIDCATG  158 (269)
Q Consensus       152 vi~~ag~  158 (269)
                      |+||+|+
T Consensus        87 ivN~vGP   93 (423)
T KOG2733|consen   87 IVNCVGP   93 (423)
T ss_pred             EEecccc
Confidence            9999994

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.29  E-value=1.2e-06  Score=76.92  Aligned_cols=77  Identities=16%  Similarity=0.196  Sum_probs=59.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCC---CCCccccc---c--CCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPR---PAPADFLR---D--WGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~-V~~~~R~~---~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      .+++++++|+|| |++|++++..|++.|+. |+++.|+.   ++..+..+   .  ..+.+..+|+.+.+++.+.++.+|
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~D  201 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSD  201 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCC
Confidence            356789999998 89999999999999986 99999985   33322221   1  134556789988888888888899


Q ss_pred             EEEEcCC
Q 024290          151 TVIDCAT  157 (269)
Q Consensus       151 ~vi~~ag  157 (269)
                      +||||..
T Consensus       202 ilINaTp  208 (289)
T PRK12548        202 ILVNATL  208 (289)
T ss_pred             EEEEeCC
Confidence            9999985

>cd00704 MDH Malate dehydrogenase

Probab=98.28  E-value=8.9e-06  Score=72.44  Aligned_cols=100  Identities=12%  Similarity=0.064  Sum_probs=70.1

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCC-------CeEEEEeCCCCCCccccccCCCEEEEcCCCCC-----------CcHHHHh
Q 024290           85 SILVVGATGTLGRQIVRRALDEG-------YDVRCLVRPRPAPADFLRDWGATVVNADLSKP-----------ETIPATL  146 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G-------~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~-----------~~l~~~~  146 (269)
                      ||.|+||+|.+|+.++..|+..|       +++++++++...  +     ..+....|+.|.           ....+.+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~--~-----~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~   74 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM--K-----ALEGVVMELQDCAFPLLKGVVITTDPEEAF   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc--C-----ccceeeeehhhhcccccCCcEEecChHHHh
Confidence            79999999999999999998866       259999987520  0     112233344443           3556788


Q ss_pred             cCccEEEEcCCCCC-----CccchhhcHHHHHHHHHHHHHcC-CC-eEEEec
Q 024290          147 VGVHTVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMG-IQ-KYVFYS  191 (269)
Q Consensus       147 ~~~d~vi~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~-v~-r~V~~S  191 (269)
                      +++|+||++||...     ..+....|..-.+.+.+.+++.. .. .+|.+|
T Consensus        75 ~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          75 KDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             CCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            99999999999422     23455678888888898888873 44 455554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.26  E-value=9.5e-06  Score=73.79  Aligned_cols=99  Identities=18%  Similarity=0.269  Sum_probs=66.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGR  159 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~  159 (269)
                      ++++|.|.||||++|+.+++.|.++ +++|+.+.++...... +.+........|+.+.++++.. ++++|+||.+.+. 
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~-i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~-  114 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQS-FGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH-  114 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCC-chhhCccccCccccceecCCHHHhcCCCEEEEcCCH-
Confidence            5579999999999999999999998 6899999886443222 1221222333455444434332 5789999998862 


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                                .....++..+ +.| .++|-+|+..
T Consensus       115 ----------~~s~~i~~~~-~~g-~~VIDlSs~f  137 (381)
T PLN02968        115 ----------GTTQEIIKAL-PKD-LKIVDLSADF  137 (381)
T ss_pred             ----------HHHHHHHHHH-hCC-CEEEEcCchh
Confidence                      2455677776 345 5888888764

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.26  E-value=8.5e-06  Score=72.53  Aligned_cols=150  Identities=12%  Similarity=0.118  Sum_probs=98.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCCCCC--CccccccC-CCE-EEE--cCCCCCCcHHHHhcCc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRPA--PADFLRDW-GAT-VVN--ADLSKPETIPATLVGV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-------~V~~~~R~~~~--~~~~~~~~-~~~-~i~--~Dl~d~~~l~~~~~~~  149 (269)
                      .+||.|+|++|.+|..++-.|+..|.       ++++++.++..  ......+. ... ...  ..++  ....+.++++
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~da   79 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDPNVAFKDA   79 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCcHHHhCCC
Confidence            46899999999999999999998874       79999985432  11111110 000 000  0111  2235667899


Q ss_pred             cEEEEcCCCC-----CCccchhhcHHHHHHHHHHHHHcCC-C-eEEEecccC----------C-CCCCCCcHHHHHHHHH
Q 024290          150 HTVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGI-Q-KYVFYSIHN----------C-DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       150 d~vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v-~-r~V~~SS~~----------~-~~~~~~~y~~sK~~~e  211 (269)
                      |+||.+||..     ...+.+..|..-.+.+.+..++.+. . .+|.+|-.-          . ..++...|+.++...+
T Consensus        80 DivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs~  159 (322)
T cd01338          80 DWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHN  159 (322)
T ss_pred             CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEehHHHHH
Confidence            9999999942     2234566788888888888888763 4 455555311          1 2445567888887777


Q ss_pred             HHH----HhcCCCEEEEEcCcccccCc
Q 024290          212 QFL----QDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~----~~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.    +..+++...+|..++||+..
T Consensus       160 Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         160 RAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             HHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence            654    45789999999888899853

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.26  E-value=1.1e-05  Score=73.54  Aligned_cols=134  Identities=14%  Similarity=0.187  Sum_probs=84.9

Q ss_pred             CCCCCEEEEECC----------------CcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcH-
Q 024290           80 PVRPTSILVVGA----------------TGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI-  142 (269)
Q Consensus        80 ~~~~~~vlVtGa----------------tG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l-  142 (269)
                      .+.+++|+||||                +|.+|.+++++|..+|++|+++.++.....      ......+|+.+.+++ 
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~------~~~~~~~~v~~~~~~~  255 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT------PPGVKSIKVSTAEEML  255 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC------CCCcEEEEeccHHHHH
Confidence            478899999998                367999999999999999999987643211      112245788888777 


Q ss_pred             HHHh----cCccEEEEcCCCCCCc-------------cchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHH
Q 024290          143 PATL----VGVHTVIDCATGRPEE-------------PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLME  205 (269)
Q Consensus       143 ~~~~----~~~d~vi~~ag~~~~~-------------~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~  205 (269)
                      +.++    .++|++|+||+..++.             ....+++..+..+++..++...+ .+.++-.. +..  ..   
T Consensus       256 ~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~-~~lvgF~a-Et~--~~---  328 (390)
T TIGR00521       256 EAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKH-QVIVGFKA-ETN--DD---  328 (390)
T ss_pred             HHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCC-cEEEEEEc-CCC--cH---
Confidence            4444    4689999999953221             11224555566677777654323 33344322 111  10   


Q ss_pred             HHHHHHHHHHhcCCCEEEEEc
Q 024290          206 IKYCTEQFLQDSGLPHVIIRL  226 (269)
Q Consensus       206 sK~~~e~~~~~~gi~~~ilrp  226 (269)
                      ......+-+++.+.++++...
T Consensus       329 l~~~A~~kl~~k~~D~ivaN~  349 (390)
T TIGR00521       329 LIKYAKEKLKKKNLDMIVAND  349 (390)
T ss_pred             HHHHHHHHHHHcCCCEEEEcc
Confidence            223333446678999987654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.23  E-value=1.5e-06  Score=77.43  Aligned_cols=72  Identities=18%  Similarity=0.292  Sum_probs=54.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHC-C-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDE-G-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~-G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+++|+||||+|+||+.++++|+++ | .+++++.|+.++..++..+    +..+|+.   ++.+++.++|+|||+++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~e----l~~~~i~---~l~~~l~~aDiVv~~ts  224 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAE----LGGGKIL---SLEEALPEADIVVWVAS  224 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHH----hccccHH---hHHHHHccCCEEEECCc
Confidence            478899999999999999999999865 5 6899999975544332221    1223443   46678889999999998


Q ss_pred             C
Q 024290          158 G  158 (269)
Q Consensus       158 ~  158 (269)
                      .
T Consensus       225 ~  225 (340)
T PRK14982        225 M  225 (340)
T ss_pred             C
Confidence            5

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.19  E-value=1.8e-05  Score=70.53  Aligned_cols=100  Identities=12%  Similarity=0.065  Sum_probs=70.6

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCCCCCCccccccCCCEEEEcCCCCCC-----------cHHHHh
Q 024290           85 SILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRPAPADFLRDWGATVVNADLSKPE-----------TIPATL  146 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~-------~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~-----------~l~~~~  146 (269)
                      +|.|+|++|.+|..++..|...|.       ++++++++++...       .+....|+.|..           ...+.+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~-------a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~   73 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV-------LEGVVMELMDCAFPLLDGVVPTHDPAVAF   73 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc-------cceeEeehhcccchhcCceeccCChHHHh
Confidence            589999999999999999987553       5999998644211       122334444433           446778


Q ss_pred             cCccEEEEcCCCCC-----CccchhhcHHHHHHHHHHHHHcC-CC-eEEEec
Q 024290          147 VGVHTVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMG-IQ-KYVFYS  191 (269)
Q Consensus       147 ~~~d~vi~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~-v~-r~V~~S  191 (269)
                      +++|+||++||...     ..+....|+.-.+.+.+.+++.. .. .+|.+|
T Consensus        74 ~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        74 TDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             CCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            89999999999522     34556688888888999988873 44 455555

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.17  E-value=4.3e-06  Score=70.78  Aligned_cols=67  Identities=21%  Similarity=0.191  Sum_probs=47.7

Q ss_pred             EEE-CCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-------cCccEEEEcCCC
Q 024290           87 LVV-GATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-------VGVHTVIDCATG  158 (269)
Q Consensus        87 lVt-GatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-------~~~d~vi~~ag~  158 (269)
                      .|| .++|+||+++++.|+++|++|+++++... ..    ...  ...+|+.+.+++.+++       +++|++|||||.
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~----~~~--~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv   90 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LK----PEP--HPNLSIREIETTKDLLITLKELVQEHDILIHSMAV   90 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-cc----ccc--CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence            444 56899999999999999999999876321 11    101  1347888776666543       468999999995


Q ss_pred             CC
Q 024290          159 RP  160 (269)
Q Consensus       159 ~~  160 (269)
                      ..
T Consensus        91 ~d   92 (227)
T TIGR02114        91 SD   92 (227)
T ss_pred             cc
Confidence            43

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.17  E-value=1.2e-05  Score=74.94  Aligned_cols=75  Identities=20%  Similarity=0.174  Sum_probs=57.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Cc---cccccCCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PA---DFLRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~---~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      .+++|+|+|+|+++ +|..+++.|+++|++|++.+++... ..   +.+...++.++.+|..+     ..+.++|+||++
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~   75 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVS   75 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEEC
Confidence            36689999999866 9999999999999999999997422 21   22334477888888765     345679999999


Q ss_pred             CCCCC
Q 024290          156 ATGRP  160 (269)
Q Consensus       156 ag~~~  160 (269)
                      +|...
T Consensus        76 ~g~~~   80 (450)
T PRK14106         76 PGVPL   80 (450)
T ss_pred             CCCCC
Confidence            98643

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.11  E-value=2.8e-06  Score=74.13  Aligned_cols=75  Identities=20%  Similarity=0.278  Sum_probs=64.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      ..++|.||+||.|..++++|+.+|.+-.+..|+..++..+-..++.++-..++.+++.+++...+.++|+||+|+
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGP   81 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGP   81 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecccc
Confidence            468999999999999999999999999888999877665555566666666777788999999999999999994

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=98.09  E-value=4.5e-05  Score=68.34  Aligned_cols=92  Identities=26%  Similarity=0.304  Sum_probs=58.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCe---EEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYD---VRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~---V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      +++|+|.||||++|+.|++.|.++||.   ++.+.+..+.... +...+......|+.+     ..++++|+||.+++. 
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~-l~~~g~~i~v~d~~~-----~~~~~vDvVf~A~g~-   73 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKE-LSFKGKELKVEDLTT-----FDFSGVDIALFSAGG-   73 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCe-eeeCCceeEEeeCCH-----HHHcCCCEEEECCCh-
Confidence            468999999999999999999998764   4777776443322 211233444445543     134689999999872 


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                                ..+..+.+...+.|+ ++|=.|+
T Consensus        74 ----------g~s~~~~~~~~~~G~-~VIDlS~   95 (334)
T PRK14874         74 ----------SVSKKYAPKAAAAGA-VVIDNSS   95 (334)
T ss_pred             ----------HHHHHHHHHHHhCCC-EEEECCc
Confidence                      223345555555665 5554554

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=98.07  E-value=6.7e-05  Score=69.23  Aligned_cols=109  Identities=7%  Similarity=0.001  Sum_probs=70.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-------CC--eEEEEeCCCCCCccccccC--CCEEEEcCCCCCCcHHHHhcCccE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDE-------GY--DVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~-------G~--~V~~~~R~~~~~~~~~~~~--~~~~i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      .-||.|+|++|.+|.+++-.|+..       |.  ++++++++.+.......+.  ..-....++.-...-.+.++++|+
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~kdaDi  179 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEVFQDAEW  179 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHHhCcCCE
Confidence            358999999999999999999988       64  7888888766543211111  000000011100011456789999


Q ss_pred             EEEcCCCC-----CCccchhhcHHHHHHHHHHHHH-cCCC-eEEEec
Q 024290          152 VIDCATGR-----PEEPIKKVDWEGKVALIQCAKA-MGIQ-KYVFYS  191 (269)
Q Consensus       152 vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~-~~v~-r~V~~S  191 (269)
                      ||.++|..     ...+..+.|..-.+.+.+...+ ++.. .+|.+|
T Consensus       180 VVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        180 ALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence            99999942     2335567888888888988888 5544 555555

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=98.06  E-value=2.4e-05  Score=78.81  Aligned_cols=76  Identities=18%  Similarity=0.211  Sum_probs=60.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-Ce-------------EEEEeCCCCCCccccccC-CCEEEEcCCCCCCcHHHHh
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEG-YD-------------VRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPATL  146 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G-~~-------------V~~~~R~~~~~~~~~~~~-~~~~i~~Dl~d~~~l~~~~  146 (269)
                      .+|+|+|.|+ |++|+.+++.|.+.. ++             |++.+++.+...+..+.. +++.++.|+.|.+++.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhh
Confidence            4689999996 999999999998753 34             777777655544433333 6788999999999999999


Q ss_pred             cCccEEEEcCCC
Q 024290          147 VGVHTVIDCATG  158 (269)
Q Consensus       147 ~~~d~vi~~ag~  158 (269)
                      +++|+||++...
T Consensus       647 ~~~DaVIsalP~  658 (1042)
T PLN02819        647 SQVDVVISLLPA  658 (1042)
T ss_pred             cCCCEEEECCCc
Confidence            999999999873

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=98.06  E-value=1.6e-05  Score=73.92  Aligned_cols=73  Identities=18%  Similarity=0.262  Sum_probs=61.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag  157 (269)
                      |+|+|+|+ |.+|+++++.|.+.|++|++++++++......+..++.++.+|.++.+.+.++ ++++|.||.+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence            47999996 99999999999999999999999866544432335788999999998888888 788999998875

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.91  E-value=6.2e-06  Score=64.11  Aligned_cols=74  Identities=18%  Similarity=0.323  Sum_probs=54.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCCCCCccccccC---CCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAPADFLRDW---GATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~-V~~~~R~~~~~~~~~~~~---~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      .+.+++++|.|+ |+.|+.++..|.+.|.. |+++.|+.++..++.+..   .+.++  ++   +++.+.+.++|+||++
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~--~~---~~~~~~~~~~DivI~a   82 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAI--PL---EDLEEALQEADIVINA   82 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEE--EG---GGHCHHHHTESEEEE-
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCcccccee--eH---HHHHHHHhhCCeEEEe
Confidence            477899999996 99999999999999975 999999876654443332   23333  33   3455677889999999


Q ss_pred             CCCC
Q 024290          156 ATGR  159 (269)
Q Consensus       156 ag~~  159 (269)
                      .+..
T Consensus        83 T~~~   86 (135)
T PF01488_consen   83 TPSG   86 (135)
T ss_dssp             SSTT
T ss_pred             cCCC
Confidence            8743

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.91  E-value=8.5e-05  Score=66.83  Aligned_cols=98  Identities=16%  Similarity=0.145  Sum_probs=60.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccC-CCEEE-EcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDW-GATVV-NADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~-~~~~i-~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      |++|+|+||||++|+.+++.|.+. +++++++.++.+......... .+..+ ..++.+.+..  .+.++|+||.|... 
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~-   78 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPH-   78 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCc-
Confidence            479999999999999999999986 678887776433221111110 11111 2233344332  45679999998862 


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                                .....++..+.++|+ ++|=.|+..
T Consensus        79 ----------~~~~~~v~~a~~aG~-~VID~S~~f  102 (343)
T PRK00436         79 ----------GVSMDLAPQLLEAGV-KVIDLSADF  102 (343)
T ss_pred             ----------HHHHHHHHHHHhCCC-EEEECCccc
Confidence                      233456666666663 777777643

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.89  E-value=1.1e-05  Score=63.31  Aligned_cols=101  Identities=8%  Similarity=0.049  Sum_probs=68.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCcccc---cc----CC--CEEEEcCCCCCCcHHHHhcCccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFL---RD----WG--ATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~---~~----~~--~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      +||.|+|++|.+|++++-.|...+  .++++++++++......   .+    ..  ..+..   .    ..+.++++|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~----~~~~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---G----DYEALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---S----SGGGGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---c----cccccccccEE
Confidence            589999999999999999999987  58999999754321111   10    11  12222   1    23456789999


Q ss_pred             EEcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          153 IDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       153 i~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      |.++|...     ..+.++.|..-.+.+.+.+.+.+.. .++.++
T Consensus        74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             EEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            99999522     2345567888888888888887754 444443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.88  E-value=0.00012  Score=65.59  Aligned_cols=92  Identities=22%  Similarity=0.257  Sum_probs=55.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCe---EEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYD---VRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~---V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      |++|.|+||||++|..+++.|.++++.   +..+... +..-+.+...+   ...++.+.+.. + ++++|+||.+++. 
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG~~l~~~~---~~l~~~~~~~~-~-~~~vD~vFla~p~-   76 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS-ESAGHSVPFAG---KNLRVREVDSF-D-FSQVQLAFFAAGA-   76 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCCCeeccCC---cceEEeeCChH-H-hcCCCEEEEcCCH-
Confidence            368999999999999999999987753   3344333 22222122112   23344444332 2 4789999998861 


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                                .....+++.+.+.|+ ++|=.|+
T Consensus        77 ----------~~s~~~v~~~~~~G~-~VIDlS~   98 (336)
T PRK05671         77 ----------AVSRSFAEKARAAGC-SVIDLSG   98 (336)
T ss_pred             ----------HHHHHHHHHHHHCCC-eEEECch
Confidence                      122346666767765 4555554

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.81  E-value=0.00012  Score=65.56  Aligned_cols=99  Identities=18%  Similarity=0.331  Sum_probs=66.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCc------------------------ccc----ccCCCE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPA------------------------DFL----RDWGAT  130 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~------------------------~~~----~~~~~~  130 (269)
                      .++.++|+|+|+ |++|.++++.|+..|. ++++++++.-+..                        +.+    ....++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            367789999995 8899999999999997 8888888631100                        001    111345


Q ss_pred             EEEcCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          131 VVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       131 ~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      .+..|++ .+.+.++++++|+||.+..          |...-..+-+.|.+.++ .+|+.+
T Consensus       100 ~~~~~~~-~~~~~~~~~~~DlVid~~D----------~~~~r~~in~~~~~~~i-p~i~~~  148 (338)
T PRK12475        100 PVVTDVT-VEELEELVKEVDLIIDATD----------NFDTRLLINDLSQKYNI-PWIYGG  148 (338)
T ss_pred             EEeccCC-HHHHHHHhcCCCEEEEcCC----------CHHHHHHHHHHHHHcCC-CEEEEE
Confidence            5666765 4567888899999999874          22332345567777776 455543

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=97.81  E-value=1.4e-05  Score=66.34  Aligned_cols=178  Identities=12%  Similarity=0.029  Sum_probs=102.3

Q ss_pred             CCCEEEEECCCcHHHHHHHH-----HHHHCC----CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           82 RPTSILVVGATGTLGRQIVR-----RALDEG----YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~-----~Ll~~G----~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      +.++.++-+.+|+|+..|..     ++-+.+    |+|++++|.+.+...       ++-+.|..-..  .....++.++
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ri-------tw~el~~~Gip--~sc~a~vna~   81 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARI-------TWPELDFPGIP--ISCVAGVNAV   81 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCccc-------ccchhcCCCCc--eehHHHHhhh
Confidence            34567788899999988877     443334    899999998765432       22222321111  0111223334


Q ss_pred             EEcCC--CCCCccchhhc-----HHHHHHHHHHHHHcC--CCeEEEecccCCCCCCC-------C---cH-HHHHHHH--
Q 024290          153 IDCAT--GRPEEPIKKVD-----WEGKVALIQCAKAMG--IQKYVFYSIHNCDKHPE-------V---PL-MEIKYCT--  210 (269)
Q Consensus       153 i~~ag--~~~~~~~~~~n-----~~~~~~li~a~~~~~--v~r~V~~SS~~~~~~~~-------~---~y-~~sK~~~--  210 (269)
                      .+|+.  ...|...++-+     +..+..|.++..++.  .+.+|.++..+......       .   .+ ..++.+.  
T Consensus        82 g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~~srL~l~W  161 (315)
T KOG3019|consen   82 GNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDILSRLCLEW  161 (315)
T ss_pred             hhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHHHHHHHHHH
Confidence            44443  12233333333     445777888887763  34688877654322111       1   11 1223222  


Q ss_pred             HHH--HHhcCCCEEEEEcCcccccCcccccceeEeCCCccccccccCCCCcchhccchhc
Q 024290          211 EQF--LQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIHGHSGYSATDIRSFT  268 (269)
Q Consensus       211 e~~--~~~~gi~~~ilrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvrd~~  268 (269)
                      |..  ......+.+++|.|.+.|........++.......-.+...+..++++.++.|++
T Consensus       162 E~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~  221 (315)
T KOG3019|consen  162 EGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLV  221 (315)
T ss_pred             HHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHH
Confidence            222  2335588999999999998776666565444444455666788888888888875

>PRK04148 hypothetical protein; Provisional

Probab=97.81  E-value=0.00017  Score=55.66  Aligned_cols=93  Identities=14%  Similarity=0.216  Sum_probs=70.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~  161 (269)
                      ++++++++| .| .|.++++.|.+.|++|++++.++.... ..++.++.++.+|+.+++  .++.+++|.|+.+=-   +
T Consensus        16 ~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~-~a~~~~~~~v~dDlf~p~--~~~y~~a~liysirp---p   87 (134)
T PRK04148         16 KNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVE-KAKKLGLNAFVDDLFNPN--LEIYKNAKLIYSIRP---P   87 (134)
T ss_pred             cCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHH-HHHHhCCeEEECcCCCCC--HHHHhcCCEEEEeCC---C
Confidence            347899999 56 899999999999999999999876433 234457899999999876  345578899986532   2


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEE
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVF  189 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~  189 (269)
                             .+-...+++.+++.++.-+|.
T Consensus        88 -------~el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         88 -------RDLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             -------HHHHHHHHHHHHHcCCCEEEE
Confidence                   233457889999998875554

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.78  E-value=0.00012  Score=54.96  Aligned_cols=93  Identities=22%  Similarity=0.356  Sum_probs=67.2

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCCCCccc
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPEEPI  164 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~~~~~~  164 (269)
                      |+|.|. |.+|+.+++.|.+.+++|++++++++... .+...++.++.+|.+|++.++++ +++++.|+-+..       
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~-~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~-------   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVE-ELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD-------   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHH-HHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS-------
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHH-HHHhcccccccccchhhhHHhhcCccccCEEEEccC-------
Confidence            578885 79999999999998789999999865433 34455799999999999988876 467899988775       


Q ss_pred             hhhcHHHHHHHHHHHHHcCC-CeEEEe
Q 024290          165 KKVDWEGKVALIQCAKAMGI-QKYVFY  190 (269)
Q Consensus       165 ~~~n~~~~~~li~a~~~~~v-~r~V~~  190 (269)
                         |-.....++..+++.+. .+++..
T Consensus        72 ---~d~~n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   72 ---DDEENLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             ---SHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred             ---CHHHHHHHHHHHHHHCCCCeEEEE
Confidence               22333456666676443 455543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.78  E-value=2.5e-05  Score=61.74  Aligned_cols=76  Identities=13%  Similarity=0.223  Sum_probs=52.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      +.+++++|+|+ |.+|..+++.|.+.| ++|++.+|+.++..+.....+...+..+..+   ..++++++|+||++....
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvvi~~~~~~   92 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLIINTTPVG   92 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEEEeCcCCC
Confidence            55689999996 999999999999996 7899999976554443332222211223333   344478899999998754


Q ss_pred             C
Q 024290          160 P  160 (269)
Q Consensus       160 ~  160 (269)
                      .
T Consensus        93 ~   93 (155)
T cd01065          93 M   93 (155)
T ss_pred             C
Confidence            3

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.78  E-value=0.00046  Score=52.42  Aligned_cols=105  Identities=22%  Similarity=0.241  Sum_probs=61.0

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCC-CCcccccc----CCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRP-APADFLRD----WGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~-~~~~~~~~----~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      ||.|+||||++|+.+++.|.+.- ++++.+..+.. .....-..    .+..-+  .+.+ .. ...+.++|+||.|.+ 
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~-~~-~~~~~~~Dvvf~a~~-   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDL--SVED-AD-PEELSDVDVVFLALP-   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEE--BEEE-TS-GHHHTTESEEEE-SC-
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccce--eEee-cc-hhHhhcCCEEEecCc-
Confidence            68999999999999999999864 56655544333 22211111    112111  1211 11 233478999999986 


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHH
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEI  206 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~s  206 (269)
                                -.....+.+.+.+.|+ ++|=.|+.. ...+..+|+..
T Consensus        76 ----------~~~~~~~~~~~~~~g~-~ViD~s~~~-R~~~~~~~~~p  111 (121)
T PF01118_consen   76 ----------HGASKELAPKLLKAGI-KVIDLSGDF-RLDDDVPYGLP  111 (121)
T ss_dssp             ----------HHHHHHHHHHHHHTTS-EEEESSSTT-TTSTTSEEE-H
T ss_pred             ----------hhHHHHHHHHHhhCCc-EEEeCCHHH-hCCCCCCEEeC
Confidence                      2334567777778887 555555543 34446666543

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.76  E-value=0.00017  Score=63.97  Aligned_cols=108  Identities=15%  Similarity=0.186  Sum_probs=67.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCC--CCCccccccC-C---CEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPR--PAPADFLRDW-G---ATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~--~~~~~~~~~~-~---~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      |||.|+|++|.+|..++..|+..|+  +|++++|+.  +.......+. .   ......++.-..+. +.+.++|+||.+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~-~~l~~aDiViit   79 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL-SDVAGSDIVIIT   79 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH-HHhCCCCEEEEe
Confidence            5899999999999999999999985  599999953  2221111000 0   00000112111223 347899999999


Q ss_pred             CCCCC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEecc
Q 024290          156 ATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSI  192 (269)
Q Consensus       156 ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~SS  192 (269)
                      +|...     ..+....|..-.+.+++.+.+.+.+ .+|.+++
T Consensus        80 ag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          80 AGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            99422     1345566777788888877776544 5666664

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.76  E-value=0.00019  Score=63.47  Aligned_cols=104  Identities=15%  Similarity=0.115  Sum_probs=69.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCccc---cccCC--CEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADF---LRDWG--ATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~---~~~~~--~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      +||.|+|++|.+|++++-.|+..|  .++++++.+  .....   +.+..  ..+...  ...+++.+.++++|+||.+|
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~--~~~~~~y~~~~daDivvita   76 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGY--LGPEELKKALKGADVVVIPA   76 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEe--cCCCchHHhcCCCCEEEEeC
Confidence            589999999999999999999888  589999886  21111   11111  111111  02234667788999999999


Q ss_pred             CCC-----CCccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          157 TGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       157 g~~-----~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      |..     ...+..+.|..-.+.+++..++.+.+ .+|.+|
T Consensus        77 G~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvt  117 (310)
T cd01337          77 GVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIIS  117 (310)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            952     22345667888888888888887655 344444

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.75  E-value=0.00018  Score=55.07  Aligned_cols=88  Identities=20%  Similarity=0.283  Sum_probs=56.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHH-CCCeEEEE-eCCCCCCc-ccc-ccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALD-EGYDVRCL-VRPRPAPA-DFL-RDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~-~G~~V~~~-~R~~~~~~-~~~-~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      ++|+|.|++|.+|+.+++.+.+ .|+++.+. +|+++... +.. ...+..  ...+.-.++++++++.+|+||+...  
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDfT~--   76 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDFTN--   76 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEES---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEcCC--
Confidence            4899999999999999999999 67887665 45442111 111 000111  1122223678888888999998763  


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCC
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGI  184 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v  184 (269)
                               .......++.+.++|+
T Consensus        77 ---------p~~~~~~~~~~~~~g~   92 (124)
T PF01113_consen   77 ---------PDAVYDNLEYALKHGV   92 (124)
T ss_dssp             ---------HHHHHHHHHHHHHHT-
T ss_pred             ---------hHHhHHHHHHHHhCCC
Confidence                     4666778888888876

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.74  E-value=0.00018  Score=64.50  Aligned_cols=99  Identities=21%  Similarity=0.393  Sum_probs=67.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCc------------------------ccccc----CCCE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPA------------------------DFLRD----WGAT  130 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~------------------------~~~~~----~~~~  130 (269)
                      .+..++|+|+|+ |++|+.+++.|...|. ++++++.+.-+..                        +.+.+    ..++
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            366789999996 9999999999999997 8999988631100                        01111    1244


Q ss_pred             EEEcCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          131 VVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       131 ~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      .+..|++ .+.+.+++++.|+||.+..          |......+-++|.+.++ .+|+.+
T Consensus       100 ~~~~~~~-~~~~~~~~~~~DlVid~~D----------n~~~r~~ln~~~~~~~i-P~i~~~  148 (339)
T PRK07688        100 AIVQDVT-AEELEELVTGVDLIIDATD----------NFETRFIVNDAAQKYGI-PWIYGA  148 (339)
T ss_pred             EEeccCC-HHHHHHHHcCCCEEEEcCC----------CHHHHHHHHHHHHHhCC-CEEEEe
Confidence            5555664 3556777889999999864          34444567778888775 455544

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.72  E-value=0.00029  Score=63.22  Aligned_cols=67  Identities=18%  Similarity=0.327  Sum_probs=45.6

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEE---EEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVR---CLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~---~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      +|+|.||||++|+.|++.|.+++|.++   .+.+....... +...+...+..|+.     ...+.++|+||.+++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~-~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g   70 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRK-VTFKGKELEVNEAK-----IESFEGIDIALFSAG   70 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCe-eeeCCeeEEEEeCC-----hHHhcCCCEEEECCC
Confidence            589999999999999999999887654   44455333222 22223455555653     123478999999987

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.72  E-value=0.0005  Score=59.37  Aligned_cols=66  Identities=21%  Similarity=0.375  Sum_probs=46.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEe-CCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLV-RPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~-R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ++|.|+|++|.+|+.+++.+.+. +.+++++. ++++.....        -..++...+++.++++++|+||+++.
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~--------~~~~i~~~~dl~~ll~~~DvVid~t~   69 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ--------GALGVAITDDLEAVLADADVLIDFTT   69 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc--------CCCCccccCCHHHhccCCCEEEECCC
Confidence            68999999999999999988864 68888754 443322221        12244445667777778999998875

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.72  E-value=0.00019  Score=66.77  Aligned_cols=100  Identities=17%  Similarity=0.273  Sum_probs=72.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPAT-LVGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~  158 (269)
                      ..+++++|+|+ |.+|+.+++.|.+.|++|++++++++...+.... .++.++.+|.++.+.+.++ ++++|.||-+...
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~  307 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTND  307 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCC
Confidence            45689999996 9999999999999999999999987654433222 3678899999999888654 4678999876652


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      .      +.|..    +...+++.+..++|...
T Consensus       308 ~------~~n~~----~~~~~~~~~~~~ii~~~  330 (453)
T PRK09496        308 D------EANIL----SSLLAKRLGAKKVIALV  330 (453)
T ss_pred             c------HHHHH----HHHHHHHhCCCeEEEEE
Confidence            1      23333    33345666776666544

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.70  E-value=0.00033  Score=63.16  Aligned_cols=37  Identities=22%  Similarity=0.440  Sum_probs=30.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPR  117 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~  117 (269)
                      |++++|+|+||||++|+.+++.|.+.. .+++++.++.
T Consensus         1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            346899999999999999999999875 4888885554

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.68  E-value=0.0042  Score=49.27  Aligned_cols=147  Identities=20%  Similarity=0.166  Sum_probs=79.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCc-------HHHHh--cCccEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPET-------IPATL--VGVHTV  152 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~-------l~~~~--~~~d~v  152 (269)
                      ...+|+|.||-|-+|+++++.+..++|-|.-++-.+.+..+     .-.++.+|-.=.|+       +.+.+  +++|.|
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad-----~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav   76 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD-----SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV   76 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc-----ceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence            34589999999999999999999999999888775433221     11222233211111       12223  368999


Q ss_pred             EEcCCCCC------CccchhhcHHHHHHHHH-----H-H-HHcCCCeEEEeccc-CC--CCCCCCcHHHHHHHHHHHHHh
Q 024290          153 IDCATGRP------EEPIKKVDWEGKVALIQ-----C-A-KAMGIQKYVFYSIH-NC--DKHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       153 i~~ag~~~------~~~~~~~n~~~~~~li~-----a-~-~~~~v~r~V~~SS~-~~--~~~~~~~y~~sK~~~e~~~~~  216 (269)
                      |+.||...      .+.+.+.+++--..+..     . + ...+.+-++.+.-. .+  +.+....|+..|.++.++.+.
T Consensus        77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~S  156 (236)
T KOG4022|consen   77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTSS  156 (236)
T ss_pred             EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcccchhHHHHHHHHHHHH
Confidence            99998422      11111222221111111     1 1 11122234443322 21  344456799999999998864


Q ss_pred             -----cCCC----EEEEEcCcccccC
Q 024290          217 -----SGLP----HVIIRLWPYWAIC  233 (269)
Q Consensus       217 -----~gi~----~~ilrp~~i~g~~  233 (269)
                           +|++    ...|-|-.+-.|+
T Consensus       157 Laak~SGlP~gsaa~~ilPVTLDTPM  182 (236)
T KOG4022|consen  157 LAAKDSGLPDGSAALTILPVTLDTPM  182 (236)
T ss_pred             hcccccCCCCCceeEEEeeeeccCcc
Confidence                 4544    3444555554444

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.67  E-value=0.00037  Score=62.77  Aligned_cols=98  Identities=16%  Similarity=0.111  Sum_probs=59.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHC-CCeEEEE-eCCCCCCccccc-cCCCEEE-EcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCL-VRPRPAPADFLR-DWGATVV-NADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~-~R~~~~~~~~~~-~~~~~~i-~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      ++|.|+||||++|..+++.|.+. +++++.+ +++......... ...+... ..++.+ .+..++++++|+||.|.+. 
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~DvVf~alP~-   78 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEP-IDEEEIAEDADVVFLALPH-   78 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeec-CCHHHhhcCCCEEEECCCc-
Confidence            47999999999999999999987 5788854 543322211110 0111111 111221 1334454689999999862 


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                                .....++..+.+.| .++|=.|+..
T Consensus        79 ----------~~s~~~~~~~~~~G-~~VIDlS~~f  102 (346)
T TIGR01850        79 ----------GVSAELAPELLAAG-VKVIDLSADF  102 (346)
T ss_pred             ----------hHHHHHHHHHHhCC-CEEEeCChhh
Confidence                      23456777777777 4788888653

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.67  E-value=9.6e-05  Score=60.50  Aligned_cols=65  Identities=18%  Similarity=0.279  Sum_probs=39.5

Q ss_pred             CCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcH----HHHhcCccEEEEcCCCCC
Q 024290           90 GATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI----PATLVGVHTVIDCATGRP  160 (269)
Q Consensus        90 GatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l----~~~~~~~d~vi~~ag~~~  160 (269)
                      -.||..|.+|++.+..+|++|+++..... ..   ...+++.+..  ...+++    .+.+...|++|++|+..+
T Consensus        26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~---~p~~~~~i~v--~sa~em~~~~~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   26 RSSGKMGAALAEEAARRGAEVTLIHGPSS-LP---PPPGVKVIRV--ESAEEMLEAVKELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             S--SHHHHHHHHHHHHTT-EEEEEE-TTS--------TTEEEEE---SSHHHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred             CCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc---ccccceEEEe--cchhhhhhhhccccCcceeEEEecchhh
Confidence            45799999999999999999999998632 11   0125555553  344443    344467899999999544

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.63  E-value=0.00046  Score=64.18  Aligned_cols=75  Identities=15%  Similarity=0.075  Sum_probs=52.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc---cccccCCCEEEEcCCCCCCcHHHHhc-CccEEEEcC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRDWGATVVNADLSKPETIPATLV-GVHTVIDCA  156 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~---~~~~~~~~~~i~~Dl~d~~~l~~~~~-~~d~vi~~a  156 (269)
                      +.+|+|+|+|++| +|.++++.|++.|++|++.+++.....   +.+...++.+..++.  ...   .+. ++|.||.+.
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~--~~~---~~~~~~d~vV~s~   76 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSH--PLE---LLDEDFDLMVKNP   76 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCC--CHH---HhcCcCCEEEECC
Confidence            5678999999876 999999999999999999987643221   223444666554332  221   233 489999999


Q ss_pred             CCCCC
Q 024290          157 TGRPE  161 (269)
Q Consensus       157 g~~~~  161 (269)
                      |....
T Consensus        77 gi~~~   81 (447)
T PRK02472         77 GIPYT   81 (447)
T ss_pred             CCCCC
Confidence            86543

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.61  E-value=0.00022  Score=63.12  Aligned_cols=100  Identities=12%  Similarity=0.154  Sum_probs=67.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCccccccC---------CCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRDW---------GATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~~~~---------~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      +||.|+|+ |.+|+.++..|+..|  ++|++++++.+.......+.         ...+..      ... +.+.++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~------~~~-~~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA------GDY-SDCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc------CCH-HHhCCCCEE
Confidence            47999995 999999999999999  68999999866543222111         111111      112 346799999


Q ss_pred             EEcCCCC-----CCccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          153 IDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       153 i~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      |+++|..     ...+....|..-.+.+.+.+++.+.+ .++.+|
T Consensus        73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9999952     22345567777788888888887654 455554

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.60  E-value=0.001  Score=56.95  Aligned_cols=71  Identities=25%  Similarity=0.333  Sum_probs=57.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag  157 (269)
                      +++|||.|||+- |+.|++.|.+.|++|++..-.....   ....++.++.+-+.|.+.+.+++.  ++++||+..-
T Consensus         2 ~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~---~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATH   74 (248)
T PRK08057          2 MPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGG---PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATH   74 (248)
T ss_pred             CceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCC---cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCC
Confidence            567999999864 9999999999999988877654332   334467888888888899999985  7999999875

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.59  E-value=0.00059  Score=60.79  Aligned_cols=109  Identities=11%  Similarity=0.077  Sum_probs=69.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCCCCC--CccccccC-CCE-EEEcCCCCCCcHHHHhcCccE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRPA--PADFLRDW-GAT-VVNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-------~V~~~~R~~~~--~~~~~~~~-~~~-~i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      ..||.|+|++|++|+.++-.|+..|.       ++++++.++..  ......+. ... ....+..-.....+.++++|+
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDv   82 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDVDA   82 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCCCE
Confidence            35899999999999999999998883       79999885421  21111110 010 010111111234566789999


Q ss_pred             EEEcCCCC-----CCccchhhcHHHHHHHHHHHHHcCC-C-eEEEec
Q 024290          152 VIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGI-Q-KYVFYS  191 (269)
Q Consensus       152 vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v-~-r~V~~S  191 (269)
                      ||.+||..     ...+....|..-.+.+.+.+++... . .++.+|
T Consensus        83 VVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        83 ALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             EEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            99999952     2234566788888889988888865 4 444444

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.58  E-value=0.00043  Score=61.84  Aligned_cols=97  Identities=22%  Similarity=0.278  Sum_probs=64.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCC---cHHHHhc--CccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE---TIPATLV--GVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~---~l~~~~~--~~d~vi~~ag  157 (269)
                      +.+|||+||+|++|...++.+...|+.+++.+.+.++.. .+++.+...+. |+.+.+   .+.++..  ++|+|+++.|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi-~y~~~~~~~~v~~~t~g~gvDvv~D~vG  220 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVI-NYREEDFVEQVRELTGGKGVDVVLDTVG  220 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEE-cCCcccHHHHHHHHcCCCCceEEEECCC
Confidence            689999999999999999999999977777776655555 56666654443 344443   2233332  6999999988


Q ss_pred             CCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       158 ~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      ...           ....+++++..  ++++.++..+
T Consensus       221 ~~~-----------~~~~l~~l~~~--G~lv~ig~~~  244 (326)
T COG0604         221 GDT-----------FAASLAALAPG--GRLVSIGALS  244 (326)
T ss_pred             HHH-----------HHHHHHHhccC--CEEEEEecCC
Confidence            321           12244444433  5888877655

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.57  E-value=0.00023  Score=57.02  Aligned_cols=113  Identities=19%  Similarity=0.203  Sum_probs=68.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCCc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE  162 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~  162 (269)
                      |++|.++| .|-+|+.+++.|+++|++|++.+|++++..++.+ .+++       -.++..++.+++|+||-+..     
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-~g~~-------~~~s~~e~~~~~dvvi~~v~-----   66 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE-AGAE-------VADSPAEAAEQADVVILCVP-----   66 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH-TTEE-------EESSHHHHHHHBSEEEE-SS-----
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH-hhhh-------hhhhhhhHhhcccceEeecc-----
Confidence            57899999 5999999999999999999999998665544332 2321       13466677778899998874     


Q ss_pred             cchhhcHHHHHHHHHH---HHHcCCCe-EEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEEE
Q 024290          163 PIKKVDWEGKVALIQC---AKAMGIQK-YVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVI  223 (269)
Q Consensus       163 ~~~~~n~~~~~~li~a---~~~~~v~r-~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~i  223 (269)
                           +-.....++..   +.....++ ||-.|+..         -..+...++.+++.|+.|+-
T Consensus        67 -----~~~~v~~v~~~~~i~~~l~~g~iiid~sT~~---------p~~~~~~~~~~~~~g~~~vd  117 (163)
T PF03446_consen   67 -----DDDAVEAVLFGENILAGLRPGKIIIDMSTIS---------PETSRELAERLAAKGVRYVD  117 (163)
T ss_dssp             -----SHHHHHHHHHCTTHGGGS-TTEEEEE-SS-----------HHHHHHHHHHHHHTTEEEEE
T ss_pred             -----cchhhhhhhhhhHHhhccccceEEEecCCcc---------hhhhhhhhhhhhhccceeee
Confidence                 22223333332   22222334 44444432         33456666777778866653

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.57  E-value=0.00019  Score=63.54  Aligned_cols=73  Identities=21%  Similarity=0.278  Sum_probs=48.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc----------cccCCC------EEEEcCCCCCCcHHHHhc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----------LRDWGA------TVVNADLSKPETIPATLV  147 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----------~~~~~~------~~i~~Dl~d~~~l~~~~~  147 (269)
                      ++|.|+| .|.+|..++..|+++|++|++.+|+++.....          +.+.+.      ......+.-..++.++++
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~   81 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVA   81 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhC
Confidence            5799999 79999999999999999999999986433221          111111      000001111235666778


Q ss_pred             CccEEEEcCC
Q 024290          148 GVHTVIDCAT  157 (269)
Q Consensus       148 ~~d~vi~~ag  157 (269)
                      ++|+|+.+..
T Consensus        82 ~ad~Vi~avp   91 (308)
T PRK06129         82 DADYVQESAP   91 (308)
T ss_pred             CCCEEEECCc
Confidence            8999999874

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.56  E-value=0.00046  Score=57.37  Aligned_cols=36  Identities=17%  Similarity=0.295  Sum_probs=31.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRP  116 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~  116 (269)
                      .+..++|+|.| .|++|.++++.|...|. ++++++.+
T Consensus        18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            36678999999 69999999999999996 88988876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.56  E-value=0.00047  Score=61.13  Aligned_cols=104  Identities=17%  Similarity=0.137  Sum_probs=68.0

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccc--cccCC--CEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADF--LRDWG--ATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~--~~~~~--~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      ||.|+|++|.+|..++-.|+.++.  +++++++++ ...+.  +.+..  ..+...  .+.+++.+.++++|+||.++|.
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~g~a~DL~~~~~~~~i~~~--~~~~~~~~~~~daDivvitaG~   77 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AAGVAADLSHIPTAASVKGF--SGEEGLENALKGADVVVIPAGV   77 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-CcEEEchhhcCCcCceEEEe--cCCCchHHHcCCCCEEEEeCCC
Confidence            589999999999999999988874  899999865 21111  11110  111110  1123456788999999999994


Q ss_pred             C-----CCccchhhcHHHHHHHHHHHHHcCCCe-EEEec
Q 024290          159 R-----PEEPIKKVDWEGKVALIQCAKAMGIQK-YVFYS  191 (269)
Q Consensus       159 ~-----~~~~~~~~n~~~~~~li~a~~~~~v~r-~V~~S  191 (269)
                      .     ...+....|..-.+.+.+...+.+..- +|.+|
T Consensus        78 ~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs  116 (312)
T TIGR01772        78 PRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT  116 (312)
T ss_pred             CCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence            2     233456677777788888887776543 44444

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.55  E-value=0.00048  Score=61.24  Aligned_cols=102  Identities=11%  Similarity=0.127  Sum_probs=69.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCcccc---ccC-----CCEEEEcCCCCCCcHHHHhcCccE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFL---RDW-----GATVVNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~---~~~-----~~~~i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      .++||.|+|+ |.+|..++-.|+..|.  ++++++++.+......   .+.     .+.+. .     +. .+.++++|+
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~-----~~-~~~~~~adi   76 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A-----GD-YSDCKDADL   76 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e-----CC-HHHhCCCCE
Confidence            4579999997 9999999999999985  8999999765432211   111     11111 1     12 245789999


Q ss_pred             EEEcCCCC-----CCccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          152 VIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       152 vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      ||.++|..     ...+....|..-.+.+++.+++.+.+ .++.+|
T Consensus        77 vIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         77 VVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             EEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99999952     22355667777788888888877655 444444

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.54  E-value=0.00012  Score=63.91  Aligned_cols=74  Identities=22%  Similarity=0.394  Sum_probs=51.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+++++|+|+ |++|++++..|.+.| .+|+++.|+.++..++.+..+... ..++ + .++.+.+.++|+||++..
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~-~-~~~~~~~~~~DivInaTp  194 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAEL-D-LELQEELADFDLIINATS  194 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceee-c-ccchhccccCCEEEECCc
Confidence            467789999996 999999999999999 799999998665443322221110 0112 1 123355678999999986

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.52  E-value=0.00055  Score=61.14  Aligned_cols=97  Identities=14%  Similarity=0.148  Sum_probs=62.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHH----Hh-cCccEEEEc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPA----TL-VGVHTVIDC  155 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~----~~-~~~d~vi~~  155 (269)
                      .+.+|+|+||+|.+|..+++.+...|.+|+++++++++... +++ .++..+ .|..+.+++.+    .. .++|+++++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~-~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d~  228 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDL-LKNKLGFDDA-FNYKEEPDLDAALKRYFPNGIDIYFDN  228 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHhcCCcee-EEcCCcccHHHHHHHhCCCCcEEEEEC
Confidence            46799999999999999999999999999998887554332 323 455332 23333223322    22 368999999


Q ss_pred             CCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       156 ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      .|.           ......++.++..  ++|+.++..
T Consensus       229 ~g~-----------~~~~~~~~~l~~~--G~iv~~G~~  253 (338)
T cd08295         229 VGG-----------KMLDAVLLNMNLH--GRIAACGMI  253 (338)
T ss_pred             CCH-----------HHHHHHHHHhccC--cEEEEeccc
Confidence            872           1123344555443  478877653

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.49  E-value=0.00084  Score=59.17  Aligned_cols=106  Identities=13%  Similarity=0.111  Sum_probs=68.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCccccccC--CCEE--EEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRDW--GATV--VNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~~~~--~~~~--i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      +||.|+|+ |+||+.++-.|+.++  .++++++...+...-...+.  ...+  ....+....+ .+.+++.|+|+-+||
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG   78 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG   78 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence            58999999 999999999998776  48999999844332211111  0001  1111211111 455679999999998


Q ss_pred             C-----CCCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          158 G-----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       158 ~-----~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      .     ....+.++.|..-.+.+.+...+.+..-++.+-
T Consensus        79 ~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVv  117 (313)
T COG0039          79 VPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVV  117 (313)
T ss_pred             CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence            3     233566778888888888888887765444443

>PRK05442 malate dehydrogenase; Provisional

Probab=97.48  E-value=0.00085  Score=59.87  Aligned_cols=109  Identities=11%  Similarity=0.103  Sum_probs=68.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCCCCC--CccccccC-CCE-EEEcCCCCCCcHHHHhcCccE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRPA--PADFLRDW-GAT-VVNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-------~V~~~~R~~~~--~~~~~~~~-~~~-~i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      ++||.|+|++|.+|..++-.|+..|.       +++++++++..  ......+. ... ....+..=.....+.++++|+
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~daDi   83 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKDADV   83 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCCCCE
Confidence            46899999999999999999988763       78999885432  11111000 000 000011001233466789999


Q ss_pred             EEEcCCCC-----CCccchhhcHHHHHHHHHHHHHcC--CCeEEEec
Q 024290          152 VIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMG--IQKYVFYS  191 (269)
Q Consensus       152 vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~--v~r~V~~S  191 (269)
                      ||.+||..     ...+....|..-.+.+.+..++..  -..+|.+|
T Consensus        84 VVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         84 ALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             EEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            99999942     233456678888888888888843  23555555

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.47  E-value=0.00087  Score=64.83  Aligned_cols=91  Identities=18%  Similarity=0.260  Sum_probs=70.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~~~  161 (269)
                      ..+|+|.| .|.+|+.+++.|.++|+++++++.+++...+ +++.+..++.+|.+|++.++++ ++++|.+|-+..    
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~-~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~----  473 (601)
T PRK03659        400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNL-MRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCN----  473 (601)
T ss_pred             cCCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHH-HHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeC----
Confidence            35789998 5999999999999999999999998765443 4556899999999999988876 578899988765    


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCC
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQ  185 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~  185 (269)
                            |......+++.+++....
T Consensus       474 ------d~~~n~~i~~~~r~~~p~  491 (601)
T PRK03659        474 ------EPEDTMKIVELCQQHFPH  491 (601)
T ss_pred             ------CHHHHHHHHHHHHHHCCC
Confidence                  123334566666666443

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.45  E-value=0.0024  Score=57.46  Aligned_cols=70  Identities=21%  Similarity=0.350  Sum_probs=42.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~---~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ..++|.|.||||++|..+++.|.+++|   ++..+......... +...+......++.     ...+.++|+||.+++
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~-~~~~~~~~~v~~~~-----~~~~~~~D~vf~a~p   78 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKK-VTFEGRDYTVEELT-----EDSFDGVDIALFSAG   78 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCe-eeecCceeEEEeCC-----HHHHcCCCEEEECCC
Confidence            346899999999999999999999886   34333332221111 11122222222332     123468999998886

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.44  E-value=0.00058  Score=55.03  Aligned_cols=57  Identities=14%  Similarity=0.200  Sum_probs=47.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+.+++|+|+|+++.+|..+++.|.++|.+|+++.|+.                      +++.+.+.++|+||.+.+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------~~l~~~l~~aDiVIsat~~   97 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------KNLKEHTKQADIVIVAVGK   97 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------hhHHHHHhhCCEEEEcCCC
Confidence            47899999999866789999999999999999998852                      3556677788888888774

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.43  E-value=0.00051  Score=65.87  Aligned_cols=72  Identities=19%  Similarity=0.287  Sum_probs=59.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag  157 (269)
                      .+++|.| .|.+|+++++.|.++|++|++++.++++..+ +++.+..++.+|.+|++.++++ ++++|.++-+.+
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~-~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~  490 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDE-LRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIP  490 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHH-HHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence            5789998 5999999999999999999999998765444 4567899999999999888765 467898876654

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.43  E-value=0.00044  Score=60.46  Aligned_cols=103  Identities=19%  Similarity=0.230  Sum_probs=75.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~  161 (269)
                      .++++.|+|+.| +|.--++...+-|++|++++++..+..+.++.++++++..-..|++.++++.+-.|.++|++.....
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~  259 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAE  259 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccc
Confidence            578999999877 9998888888899999999998777777788888888875555888888887666666666541111


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC  195 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~  195 (269)
                           ..+   ..++..++..  +++|+++-...
T Consensus       260 -----~~~---~~~~~~lk~~--Gt~V~vg~p~~  283 (360)
T KOG0023|consen  260 -----HAL---EPLLGLLKVN--GTLVLVGLPEK  283 (360)
T ss_pred             -----cch---HHHHHHhhcC--CEEEEEeCcCC
Confidence                 111   2355556654  48999987653

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.39  E-value=0.00083  Score=59.58  Aligned_cols=97  Identities=18%  Similarity=0.207  Sum_probs=63.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~a  156 (269)
                      .+.+|+|+|++|.+|..+++.+...|.+|+++++++++. +.+.+.++..+ .|..+.+.+.+.+     +++|+++++.
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~-~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d~~  215 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKV-AYLKKLGFDVA-FNYKTVKSLEETLKKASPDGYDCYFDNV  215 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHcCCCEE-EeccccccHHHHHHHhCCCCeEEEEECC
Confidence            467899999999999999999989999999988875543 33344565332 2443333333322     3689999998


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      |..           .....++.++..  ++||.++..
T Consensus       216 G~~-----------~~~~~~~~l~~~--G~iv~~G~~  239 (325)
T TIGR02825       216 GGE-----------FSNTVIGQMKKF--GRIAICGAI  239 (325)
T ss_pred             CHH-----------HHHHHHHHhCcC--cEEEEecch
Confidence            721           112344444443  488887754

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.39  E-value=0.00038  Score=57.80  Aligned_cols=70  Identities=26%  Similarity=0.332  Sum_probs=49.8

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-cCccEEEEcCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-VGVHTVIDCAT  157 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-~~~d~vi~~ag  157 (269)
                      .++.+|+++|+|. |.+|+++++.|.+.|++|++.+++.+...+.....+.+.+  |.   +   +++ .++|+++.++.
T Consensus        24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v--~~---~---~l~~~~~Dv~vp~A~   94 (200)
T cd01075          24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV--AP---E---EIYSVDADVFAPCAL   94 (200)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE--cc---h---hhccccCCEEEeccc
Confidence            3578899999996 7999999999999999999998875543332222233332  22   2   222 26899998876

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.35  E-value=0.0012  Score=58.83  Aligned_cols=108  Identities=16%  Similarity=0.168  Sum_probs=67.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccC-C-CEEE--EcCCCCCCcHHHHhcCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDW-G-ATVV--NADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~-~-~~~i--~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      ..+||.|+|| |.+|..++..|+..| .++++++++++.......+. . ....  ...+....+.+ .++++|+||.++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVita   81 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVITA   81 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEECC
Confidence            4578999996 999999999999888 78999999765432110000 0 0000  01111123444 678999999999


Q ss_pred             CCCC-----CccchhhcHHHHHHHHHHHHHcCCCe-EEEec
Q 024290          157 TGRP-----EEPIKKVDWEGKVALIQCAKAMGIQK-YVFYS  191 (269)
Q Consensus       157 g~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r-~V~~S  191 (269)
                      |...     ..+....|..-.+.+++.+.+...+- +|++|
T Consensus        82 g~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvs  122 (319)
T PTZ00117         82 GVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVT  122 (319)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            7422     12344456666667777777776554 55554

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.34  E-value=0.0019  Score=54.74  Aligned_cols=99  Identities=19%  Similarity=0.306  Sum_probs=62.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccc----------------------ccc----CCCEEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF----------------------LRD----WGATVV  132 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~----------------------~~~----~~~~~i  132 (269)
                      .+..++|+|.| .|++|.++++.|...|. ++++++.+.-+...+                      +.+    ..++.+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            36678999999 69999999999999995 777776542111000                      000    123344


Q ss_pred             EcCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          133 NADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       133 ~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      ..++ +.+.+.++++++|+||.+..          |...-..+-+.|.+.++ .+|+.+
T Consensus        97 ~~~i-~~~~~~~~~~~~DvVi~~~d----------~~~~r~~l~~~~~~~~i-p~i~~g  143 (228)
T cd00757          97 NERL-DAENAEELIAGYDLVLDCTD----------NFATRYLINDACVKLGK-PLVSGA  143 (228)
T ss_pred             ccee-CHHHHHHHHhCCCEEEEcCC----------CHHHHHHHHHHHHHcCC-CEEEEE
Confidence            4444 23556677888999999874          22333456677777775 555544

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.33  E-value=0.0017  Score=60.44  Aligned_cols=67  Identities=19%  Similarity=0.282  Sum_probs=50.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |+|.|+||+|.+|..+++.|.+.|++|++.+|+++...+...+.++.+       ..+..+.+.++|+||.+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-------~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-------ANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-------ccCHHHHhccCCEEEEecC
Confidence            479999999999999999999999999999998654333333334321       2234556778899998875

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.29  E-value=0.0026  Score=49.21  Aligned_cols=98  Identities=17%  Similarity=0.382  Sum_probs=63.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCcc----------cc------------c----cCCCEEEEcC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD----------FL------------R----DWGATVVNAD  135 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~----------~~------------~----~~~~~~i~~D  135 (269)
                      .++|+|.| .|.+|+.+++.|...|. ++++++.+.=+...          ..            .    ...++.+..+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            46899999 59999999999999996 78888875211100          00            0    0124445555


Q ss_pred             CCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          136 LSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       136 l~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      + +.+.+.++++++|+||.+..          +......+-+.|++.+. .+|+.+..
T Consensus        81 ~-~~~~~~~~~~~~d~vi~~~d----------~~~~~~~l~~~~~~~~~-p~i~~~~~  126 (135)
T PF00899_consen   81 I-DEENIEELLKDYDIVIDCVD----------SLAARLLLNEICREYGI-PFIDAGVN  126 (135)
T ss_dssp             C-SHHHHHHHHHTSSEEEEESS----------SHHHHHHHHHHHHHTT--EEEEEEEE
T ss_pred             c-ccccccccccCCCEEEEecC----------CHHHHHHHHHHHHHcCC-CEEEEEee
Confidence            5 34556777788899998864          23444567778888875 67776644

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.28  E-value=0.0003  Score=61.61  Aligned_cols=78  Identities=17%  Similarity=0.082  Sum_probs=52.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      +.+++++|.|+ |+.|++++..|.+.|. +|+++.|+.++..++.+..+.......+...+++...+.++|+|||+....
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g  201 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD  201 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence            56789999995 9999999999999996 799999987655443332211100011111133445567899999998743

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK08223 hypothetical protein; Validated

Probab=97.28  E-value=0.0045  Score=53.99  Aligned_cols=101  Identities=15%  Similarity=0.172  Sum_probs=65.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCcc----------------------cccc----CCCEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD----------------------FLRD----WGATVVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~----------------------~~~~----~~~~~i~  133 (269)
                      +...+|+|+| .|++|..+++.|+..|. ++++++.+.-+...                      .+.+    ..++.+.
T Consensus        25 L~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~  103 (287)
T PRK08223         25 LRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP  103 (287)
T ss_pred             HhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            6678899999 59999999999999995 77777765311110                      0001    1244444


Q ss_pred             cCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      ..++ ++.+.++++++|+||++.-.        .++..-..+-++|.+.++ .+|+.+.
T Consensus       104 ~~l~-~~n~~~ll~~~DlVvD~~D~--------~~~~~r~~ln~~c~~~~i-P~V~~~~  152 (287)
T PRK08223        104 EGIG-KENADAFLDGVDVYVDGLDF--------FEFDARRLVFAACQQRGI-PALTAAP  152 (287)
T ss_pred             cccC-ccCHHHHHhCCCEEEECCCC--------CcHHHHHHHHHHHHHcCC-CEEEEec
Confidence            4554 45677888999999976631        112333456778888875 5565543

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.28  E-value=0.001  Score=56.00  Aligned_cols=70  Identities=17%  Similarity=0.201  Sum_probs=47.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-------CCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-------WGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-------~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      |+|.|+||+|.+|..++..|.+.|++|++.+|++++..+....       .++..   .+. .....++++..|+||.+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~---~~~-~~~~~ea~~~aDvVilav   76 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDI---KVT-GADNAEAAKRADVVILAV   76 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCc---eEE-EeChHHHHhcCCEEEEEC
Confidence            4799999999999999999999999999999986554332111       11100   000 012245667889999887


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      .
T Consensus        77 p   77 (219)
T TIGR01915        77 P   77 (219)
T ss_pred             C
Confidence            5

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.27  E-value=0.0052  Score=53.26  Aligned_cols=107  Identities=21%  Similarity=0.225  Sum_probs=67.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCC---cc-c------------------ccc--CCCEEEEc-
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAP---AD-F------------------LRD--WGATVVNA-  134 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~---~~-~------------------~~~--~~~~~i~~-  134 (269)
                      +...+|+|.| .|++|+++++.|+..| -++++++.+.-..   .. .                  +.+  +.+++... 
T Consensus        28 L~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         28 FADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             hcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            6678899999 5999999999999999 5888888653111   10 0                  001  12222222 


Q ss_pred             CCCCCCcHHHHhc-CccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCC
Q 024290          135 DLSKPETIPATLV-GVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP  199 (269)
Q Consensus       135 Dl~d~~~l~~~~~-~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~  199 (269)
                      +..+++.+.+++. ++|+||.+..          ++..-..|.+.|++.++ .+|..+..+...+|
T Consensus       107 ~~i~~e~~~~ll~~~~D~VIdaiD----------~~~~k~~L~~~c~~~~i-p~I~~gGag~k~dp  161 (268)
T PRK15116        107 DFITPDNVAEYMSAGFSYVIDAID----------SVRPKAALIAYCRRNKI-PLVTTGGAGGQIDP  161 (268)
T ss_pred             cccChhhHHHHhcCCCCEEEEcCC----------CHHHHHHHHHHHHHcCC-CEEEECCcccCCCC
Confidence            2223556666664 6899999875          23344568889998886 56666555543333

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.27  E-value=0.00019  Score=62.85  Aligned_cols=71  Identities=14%  Similarity=0.228  Sum_probs=50.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccC-----CCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDW-----GATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~-----~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      ..+++|+|.|+ |+.|++++..|...|. +|++++|+.++...+.++.     ...+.     ..+++.+.+.++|+||+
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~-----~~~~~~~~~~~aDiVIn  198 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARAT-----AGSDLAAALAAADGLVH  198 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEE-----eccchHhhhCCCCEEEE
Confidence            56789999995 8999999999999996 8999999866554433221     11211     12334556678999999


Q ss_pred             cCC
Q 024290          155 CAT  157 (269)
Q Consensus       155 ~ag  157 (269)
                      +..
T Consensus       199 aTp  201 (284)
T PRK12549        199 ATP  201 (284)
T ss_pred             CCc
Confidence            953

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.26  E-value=0.0022  Score=55.13  Aligned_cols=111  Identities=14%  Similarity=0.087  Sum_probs=71.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCC-CCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRP-RPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~-~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ..+-||.|.||.|+||+-|.-.|..+.  -+..+.+.. .+.....+...+-......++-++++++++++.|+|+.-||
T Consensus        26 ~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAG  105 (345)
T KOG1494|consen   26 QRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPAG  105 (345)
T ss_pred             cCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecCC
Confidence            445689999999999999986554332  133333332 22222223333333334455667799999999999999999


Q ss_pred             C-----CCCccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          158 G-----RPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       158 ~-----~~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      .     ...++.+++|..-.+.|..++.+.-.+ ++.++|
T Consensus       106 VPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  106 VPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             CCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            4     335678888888888888877665333 444444

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.26  E-value=0.0031  Score=52.58  Aligned_cols=88  Identities=22%  Similarity=0.275  Sum_probs=61.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-CccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+.+++|+|+|| |.+|..-++.|++.|.+|++++..... ..++....+++++..++..     ..++++|.||-+.+.
T Consensus         6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~-----~dl~~~~lVi~at~d   79 (205)
T TIGR01470         6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDA-----DILEGAFLVIAATDD   79 (205)
T ss_pred             EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCH-----HHhCCcEEEEECCCC
Confidence            367899999995 999999999999999999999875432 2222233367888877652     235688988877652


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcC
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMG  183 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~  183 (269)
                      .          .-...+...|++.+
T Consensus        80 ~----------~ln~~i~~~a~~~~   94 (205)
T TIGR01470        80 E----------ELNRRVAHAARARG   94 (205)
T ss_pred             H----------HHHHHHHHHHHHcC
Confidence            1          12245777777665

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.26  E-value=0.0037  Score=53.38  Aligned_cols=98  Identities=20%  Similarity=0.262  Sum_probs=62.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccc----------------------ccc--CC--CEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF----------------------LRD--WG--ATVVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~----------------------~~~--~~--~~~i~  133 (269)
                      +...+|+|.| .|++|..+++.|+..|. ++++++.+.-+...+                      +.+  +.  ++.+.
T Consensus        22 L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~  100 (240)
T TIGR02355        22 LKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN  100 (240)
T ss_pred             HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            6678899999 59999999999999994 778877753221110                      000  12  33333


Q ss_pred             cCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      ..++ .+.+.+++++.|+||.+..          |......+-++|.+.++ .+|+.+
T Consensus       101 ~~i~-~~~~~~~~~~~DlVvd~~D----------~~~~r~~ln~~~~~~~i-p~v~~~  146 (240)
T TIGR02355       101 AKLD-DAELAALIAEHDIVVDCTD----------NVEVRNQLNRQCFAAKV-PLVSGA  146 (240)
T ss_pred             ccCC-HHHHHHHhhcCCEEEEcCC----------CHHHHHHHHHHHHHcCC-CEEEEE
Confidence            3332 3456777888999998874          23333456677777775 455543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=97.26  E-value=0.0042  Score=49.51  Aligned_cols=70  Identities=11%  Similarity=0.138  Sum_probs=46.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+++++|+|+|| |-+|...++.|++.|++|++++.  +...+......+++..-++.+ +    -+++.|+||-+..
T Consensus        10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp--~~~~~l~~l~~i~~~~~~~~~-~----dl~~a~lViaaT~   79 (157)
T PRK06719         10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP--EICKEMKELPYITWKQKTFSN-D----DIKDAHLIYAATN   79 (157)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC--ccCHHHHhccCcEEEecccCh-h----cCCCceEEEECCC
Confidence            478899999995 99999999999999999999853  222221111133433323322 2    2467888887653

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=97.26  E-value=0.003  Score=57.17  Aligned_cols=98  Identities=18%  Similarity=0.216  Sum_probs=63.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~  161 (269)
                      .+.+|+|.|+ |.+|..+++.+...|.+|++++.+.++..+..++.++..+. |..+.+.+.+...++|+||.+.|..  
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi-~~~~~~~~~~~~~~~D~vid~~g~~--  258 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFL-VSTDPEKMKAAIGTMDYIIDTVSAV--  258 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEE-cCCCHHHHHhhcCCCCEEEECCCCH--
Confidence            4678999775 99999999999999999988887665544444455664332 3333445555556789999998721  


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                              ......++.++..  +++|.++..
T Consensus       259 --------~~~~~~~~~l~~~--G~iv~vG~~  280 (360)
T PLN02586        259 --------HALGPLLGLLKVN--GKLITLGLP  280 (360)
T ss_pred             --------HHHHHHHHHhcCC--cEEEEeCCC
Confidence                    1112344444433  478877643

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.26  E-value=0.0013  Score=58.77  Aligned_cols=95  Identities=14%  Similarity=0.128  Sum_probs=60.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCC---cHHHHh-cCccEEEEcCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPE---TIPATL-VGVHTVIDCATG  158 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~---~l~~~~-~~~d~vi~~ag~  158 (269)
                      .+|+|+||+|.+|..+++.+...|. +|+++++++++......+.++..+ .|..+.+   .+.++. .++|+||++.|.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~v-i~~~~~~~~~~i~~~~~~gvd~vid~~g~  234 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAA-INYKTDNVAERLRELCPEGVDVYFDNVGG  234 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEE-EECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence            7999999999999999998888998 799998876543332222455432 2333322   122222 368999999872


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      .           .....++.++..  +++|.++.
T Consensus       235 ~-----------~~~~~~~~l~~~--G~iv~~G~  255 (345)
T cd08293         235 E-----------ISDTVISQMNEN--SHIILCGQ  255 (345)
T ss_pred             H-----------HHHHHHHHhccC--CEEEEEee
Confidence            1           112344444443  47887764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.25  E-value=0.0015  Score=57.78  Aligned_cols=107  Identities=11%  Similarity=0.104  Sum_probs=65.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccc---cCC-CEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLR---DWG-ATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~---~~~-~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |+||.|+|+ |.+|..++..++..|. +|++++++++.......   +.. .......+....+. +.++++|+||.+++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~   79 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG   79 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence            479999998 9999999999998875 99999997654322111   110 00000111111233 34689999999988


Q ss_pred             CCCCc-----cchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          158 GRPEE-----PIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       158 ~~~~~-----~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      .....     +....|..-...+++.+.+...+ .+|.++
T Consensus        80 ~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         80 VPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            43211     22345666666777777666544 355554

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.25  E-value=0.0052  Score=47.95  Aligned_cols=96  Identities=23%  Similarity=0.267  Sum_probs=56.9

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCcccc----------------------c----cCCCEEEEcCCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFL----------------------R----DWGATVVNADLS  137 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~----------------------~----~~~~~~i~~Dl~  137 (269)
                      +|+|.|+ |++|.++++.|...|. ++++++.+.-....+.                      .    ...++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4899995 9999999999999997 7888876532111100                      0    011233333333


Q ss_pred             CCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          138 KPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       138 d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      +. ...+.+.+.|+||.+..          |......+.+.|++.++ .+|..++.
T Consensus        80 ~~-~~~~~~~~~diVi~~~d----------~~~~~~~l~~~~~~~~i-~~i~~~~~  123 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAID----------NIAVRRALNRACKELGI-PVIDAGGL  123 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEcCC
Confidence            22 23455667788877764          23344556677777764 45555443

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.24  E-value=0.0037  Score=51.89  Aligned_cols=74  Identities=11%  Similarity=0.166  Sum_probs=50.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCC---CCCCccc------------------ccc----CCCEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRP---RPAPADF------------------LRD----WGATVVNA  134 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~---~~~~~~~------------------~~~----~~~~~i~~  134 (269)
                      +..++|+|.|+ |++|+.+++.|+..|. ++++++.+   .+.+...                  +.+    ..++.+..
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~   97 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE   97 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence            66789999995 8999999999999998 69999887   3322210                  000    12333444


Q ss_pred             CCCCCCcHHHHhcCccEEEEcC
Q 024290          135 DLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus       135 Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      +++ .+.+.++++++|+||.+.
T Consensus        98 ~i~-~~~~~~~~~~~DlVi~a~  118 (200)
T TIGR02354        98 KIT-EENIDKFFKDADIVCEAF  118 (200)
T ss_pred             eCC-HhHHHHHhcCCCEEEECC
Confidence            443 355667778888888873

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.24  E-value=0.0025  Score=52.79  Aligned_cols=68  Identities=16%  Similarity=0.156  Sum_probs=46.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc-ccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-RDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ||++.|.| +|.||..+++.|...||+|++..|+.++..+.. +..+..      -...+...+.+..|+||....
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~------i~~~~~~dA~~~aDVVvLAVP   69 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL------ITGGSNEDAAALADVVVLAVP   69 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc------cccCChHHHHhcCCEEEEecc
Confidence            35666655 899999999999999999999977655433222 222222      123455667778899997654

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.23  E-value=0.00092  Score=60.19  Aligned_cols=77  Identities=23%  Similarity=0.409  Sum_probs=53.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc----CccEEEEcC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV----GVHTVIDCA  156 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~----~~d~vi~~a  156 (269)
                      -.++.|||.||+|++|++.++.+...|..+++..++.++ .++.+..++..+ .|+.+++-++...+    ++|+|++|.
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~-~~l~k~lGAd~v-vdy~~~~~~e~~kk~~~~~~DvVlD~v  233 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK-LELVKKLGADEV-VDYKDENVVELIKKYTGKGVDVVLDCV  233 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch-HHHHHHcCCcEe-ecCCCHHHHHHHHhhcCCCccEEEECC
Confidence            356799999999999999999999999444444444333 334455554433 48887555554443    699999999


Q ss_pred             CCC
Q 024290          157 TGR  159 (269)
Q Consensus       157 g~~  159 (269)
                      |..
T Consensus       234 g~~  236 (347)
T KOG1198|consen  234 GGS  236 (347)
T ss_pred             CCC
Confidence            953

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=97.23  E-value=0.0048  Score=46.55  Aligned_cols=103  Identities=17%  Similarity=0.243  Sum_probs=62.6

Q ss_pred             CEEEEECCC---cHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC
Q 024290           84 TSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        84 ~~vlVtGat---G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      |+|.|+|++   +..|..+.+.|.+.|++|+.+.-+.....      +       +.-..++.+.-+.+|.++.+..   
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i~------G-------~~~y~sl~e~p~~iDlavv~~~---   64 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEIL------G-------IKCYPSLAEIPEPIDLAVVCVP---   64 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEET------T-------EE-BSSGGGCSST-SEEEE-S----
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEEC------c-------EEeeccccCCCCCCCEEEEEcC---
Confidence            579999988   77899999999999999998854322111      1       1112334332256898887754   


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                              -..+..+++.+.+.|++.+++.++            ..-..+.+++++.|+++.
T Consensus        65 --------~~~~~~~v~~~~~~g~~~v~~~~g------------~~~~~~~~~a~~~gi~vi  106 (116)
T PF13380_consen   65 --------PDKVPEIVDEAAALGVKAVWLQPG------------AESEELIEAAREAGIRVI  106 (116)
T ss_dssp             --------HHHHHHHHHHHHHHT-SEEEE-TT------------S--HHHHHHHHHTT-EEE
T ss_pred             --------HHHHHHHHHHHHHcCCCEEEEEcc------------hHHHHHHHHHHHcCCEEE
Confidence                    445567888888889999998887            123455666777777654

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.23  E-value=0.0039  Score=52.86  Aligned_cols=127  Identities=19%  Similarity=0.171  Sum_probs=75.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCC---Ccc-------c------------ccc----CCCEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPA---PAD-------F------------LRD----WGATVVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~---~~~-------~------------~~~----~~~~~i~  133 (269)
                      +...+|+|.| .|++|+++++.|+..|. ++++++.+.-.   ...       .            +.+    ..++.+.
T Consensus         9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            5667899999 59999999999999995 78888765211   100       0            000    1233333


Q ss_pred             cCCCCCCcHHHHh-cCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCc--------H-
Q 024290          134 ADLSKPETIPATL-VGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP--------L-  203 (269)
Q Consensus       134 ~Dl~d~~~l~~~~-~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~--------y-  203 (269)
                      ..++ ++.+..++ .++|+||.+..          ++.....|.+.|++.++ .+|...+.+...+|..-        + 
T Consensus        88 ~~i~-~~~~~~l~~~~~D~VvdaiD----------~~~~k~~L~~~c~~~~i-p~I~s~g~g~~~dp~~i~i~di~~t~~  155 (231)
T cd00755          88 EFLT-PDNSEDLLGGDPDFVVDAID----------SIRAKVALIAYCRKRKI-PVISSMGAGGKLDPTRIRVADISKTSG  155 (231)
T ss_pred             eecC-HhHHHHHhcCCCCEEEEcCC----------CHHHHHHHHHHHHHhCC-CEEEEeCCcCCCCCCeEEEccEecccc
Confidence            3333 34555555 46899999864          23444668899998876 56665554443333211        1 


Q ss_pred             HHHHHHHHHHHHhcCCC
Q 024290          204 MEIKYCTEQFLQDSGLP  220 (269)
Q Consensus       204 ~~sK~~~e~~~~~~gi~  220 (269)
                      ..--..+.+.+++.++.
T Consensus       156 ~pla~~~R~~Lrk~~~~  172 (231)
T cd00755         156 DPLARKVRKRLRKRGIF  172 (231)
T ss_pred             CcHHHHHHHHHHHcCCC
Confidence            11123455667777764

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.21  E-value=0.0014  Score=56.68  Aligned_cols=106  Identities=13%  Similarity=0.039  Sum_probs=68.2

Q ss_pred             EEEECCCcHHHHHHHHHHHHCC----CeEEEEeCCCCCCccccccC---CCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           86 ILVVGATGTLGRQIVRRALDEG----YDVRCLVRPRPAPADFLRDW---GATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G----~~V~~~~R~~~~~~~~~~~~---~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      |.|+||+|.+|..++..|+..|    .+|+++++++++......+.   ........+.-.+++.+.++++|+||.+++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5799998999999999999988    79999999765543211111   0000112222234566788999999999984


Q ss_pred             CCC-----ccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          159 RPE-----EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       159 ~~~-----~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      ...     ......|..-.+.+++.+++.... .++.+|
T Consensus        81 ~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          81 GRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            322     223445666777788887776544 344443

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK08328 hypothetical protein; Provisional

Probab=97.20  E-value=0.0043  Score=52.68  Aligned_cols=99  Identities=25%  Similarity=0.412  Sum_probs=60.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccc-----------------------cc----cCCCEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF-----------------------LR----DWGATVV  132 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~-----------------------~~----~~~~~~i  132 (269)
                      +...+|+|.| .|++|.++++.|+..|. ++++++.+.-+...+                       +.    +..++.+
T Consensus        25 L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~  103 (231)
T PRK08328         25 LKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF  103 (231)
T ss_pred             HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence            5677899999 59999999999999995 788887643211000                       00    0123333


Q ss_pred             EcCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          133 NADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       133 ~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      ...++ .+.+.+++++.|+||.+..          |...-..+-++|++.++ .+|+.+.
T Consensus       104 ~~~~~-~~~~~~~l~~~D~Vid~~d----------~~~~r~~l~~~~~~~~i-p~i~g~~  151 (231)
T PRK08328        104 VGRLS-EENIDEVLKGVDVIVDCLD----------NFETRYLLDDYAHKKGI-PLVHGAV  151 (231)
T ss_pred             eccCC-HHHHHHHHhcCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEee
Confidence            44442 3446667788888888764          22222345566777775 4555544

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.20  E-value=0.0021  Score=53.82  Aligned_cols=98  Identities=17%  Similarity=0.199  Sum_probs=62.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCC---CCCccc------------------cc----cCCCEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPR---PAPADF------------------LR----DWGATVVNA  134 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~---~~~~~~------------------~~----~~~~~~i~~  134 (269)
                      +...+|+|.| .|++|..+++.|...|. ++++++.+.   +++...                  +.    ...++.+..
T Consensus        26 L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            5677899999 59999999999999996 588888762   111100                  00    012333444


Q ss_pred             CCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHc-CCCeEEEec
Q 024290          135 DLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYS  191 (269)
Q Consensus       135 Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~S  191 (269)
                      .+++ +.+.+.++++|+||.+..          |......+.+.+.+. ++ .+|+.+
T Consensus       105 ~i~~-~~~~~~~~~~DvVI~a~D----------~~~~r~~l~~~~~~~~~~-p~I~~~  150 (212)
T PRK08644        105 KIDE-DNIEELFKDCDIVVEAFD----------NAETKAMLVETVLEHPGK-KLVAAS  150 (212)
T ss_pred             ecCH-HHHHHHHcCCCEEEECCC----------CHHHHHHHHHHHHHhCCC-CEEEee
Confidence            4433 455667788899988852          233334566777776 54 566554

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.20  E-value=0.00076  Score=59.16  Aligned_cols=71  Identities=18%  Similarity=0.257  Sum_probs=53.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+++++|+|. |.+|+.+++.|...|++|++..|++++.... ...+...+     +.+++.+.+++.|+||++..
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-~~~g~~~~-----~~~~l~~~l~~aDiVint~P  218 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARI-TEMGLIPF-----PLNKLEEKVAEIDIVINTIP  218 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeee-----cHHHHHHHhccCCEEEECCC
Confidence            577899999996 8999999999999999999999976543221 12233222     23456777889999999874

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.20  E-value=0.0016  Score=57.51  Aligned_cols=97  Identities=23%  Similarity=0.268  Sum_probs=60.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCC-CCcHHHHhcCccEEEEcCCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK-PETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d-~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      .+.+++|+|++|.+|.++++.+...|.+|+++++++++.. .+...+...+ .|..+ .+.+.+. .++|++++++|.. 
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~-~~~d~v~~~~g~~-  237 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLK-ILKELGADYV-IDGSKFSEDVKKL-GGADVVIELVGSP-  237 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHHHcCCcEE-EecHHHHHHHHhc-cCCCEEEECCChH-
Confidence            3578999999999999999999999999999988654322 2233333221 12222 1112222 3789999998732 


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                                .....++.+...  +++|.++...
T Consensus       238 ----------~~~~~~~~~~~~--g~~v~~g~~~  259 (332)
T cd08259         238 ----------TIEESLRSLNKG--GRLVLIGNVT  259 (332)
T ss_pred             ----------HHHHHHHHhhcC--CEEEEEcCCC
Confidence                      122344444433  4788776543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=97.19  E-value=0.0012  Score=64.12  Aligned_cols=73  Identities=18%  Similarity=0.344  Sum_probs=60.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag  157 (269)
                      .++|+|.| .|.+|+.+++.|.++|+++++++.++++... +++.+..++.+|.+|++.++++ ++++|.+|.+..
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~-~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~  473 (621)
T PRK03562        400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIET-LRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID  473 (621)
T ss_pred             cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHH-HHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeC
Confidence            35799999 5999999999999999999999998765444 3556889999999999888765 467898887764

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.19  E-value=0.00096  Score=58.79  Aligned_cols=71  Identities=14%  Similarity=0.244  Sum_probs=53.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+++++|+|. |.+|+.++..|...|.+|++.+|++++. +.....+++++     +.+++.+.+.+.|+||+++.
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~-~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t~p  219 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL-ARITEMGLSPF-----HLSELAEEVGKIDIIFNTIP  219 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHcCCeee-----cHHHHHHHhCCCCEEEECCC
Confidence            456899999995 8899999999999999999999985542 22233344433     22456777889999999874

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.16  E-value=0.0017  Score=56.79  Aligned_cols=56  Identities=14%  Similarity=0.258  Sum_probs=45.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+|+|+|.|++|.+|+.++..|+++|..|+++.|..                      .++.+.++++|+||++.|
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----------------------~~L~~~~~~aDIvI~AtG  211 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT----------------------QNLPELVKQADIIVGAVG  211 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----------------------hhHHHHhccCCEEEEccC
Confidence            57899999999988999999999999999999887732                      224444567788888776

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.16  E-value=0.0048  Score=52.89  Aligned_cols=99  Identities=20%  Similarity=0.260  Sum_probs=63.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCcc----------------------ccc----cCCCEEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD----------------------FLR----DWGATVV  132 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~----------------------~~~----~~~~~~i  132 (269)
                      .+..++|+|.|+ |++|..+++.|+..|. ++++++.+.-....                      .+.    ...++.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            367789999996 9999999999999995 77887765211100                      011    1123444


Q ss_pred             EcCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          133 NADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       133 ~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      ...++ .+.+.++++++|+||.+..          |...-..+-++|++.++ .+|+.+
T Consensus       108 ~~~i~-~~~~~~~~~~~DiVi~~~D----------~~~~r~~ln~~~~~~~i-p~v~~~  154 (245)
T PRK05690        108 NARLD-DDELAALIAGHDLVLDCTD----------NVATRNQLNRACFAAKK-PLVSGA  154 (245)
T ss_pred             eccCC-HHHHHHHHhcCCEEEecCC----------CHHHHHHHHHHHHHhCC-EEEEee
Confidence            44443 3456677889999999874          23333456677777775 455543

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.15  E-value=0.0008  Score=61.19  Aligned_cols=76  Identities=17%  Similarity=0.237  Sum_probs=56.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      +..++|+|+|+ |.+|..+++.|...|.+|++++|++++........+. .+..+..+.+.+.+.+.++|+||++++.
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~-~v~~~~~~~~~l~~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG-RIHTRYSNAYEIEDAVKRADLLIGAVLI  240 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc-eeEeccCCHHHHHHHHccCCEEEEcccc
Confidence            45678999986 9999999999999999999999976543322122222 2334556667788888999999998853

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.15  E-value=0.00071  Score=62.32  Aligned_cols=73  Identities=14%  Similarity=0.233  Sum_probs=54.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCC-CEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWG-ATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~-~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+++|+|.|+ |.+|+.+++.|.+.|. ++++..|+.++...+....+ ..     ....+++...+..+|+||++.+
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~-----~~~~~~l~~~l~~aDiVI~aT~  251 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNAS-----AHYLSELPQLIKKADIIIAAVN  251 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCe-----EecHHHHHHHhccCCEEEECcC
Confidence            367899999995 9999999999999995 79999998665444333322 22     2223566778889999999988


Q ss_pred             C
Q 024290          158 G  158 (269)
Q Consensus       158 ~  158 (269)
                      .
T Consensus       252 a  252 (414)
T PRK13940        252 V  252 (414)
T ss_pred             C
Confidence            4

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.15  E-value=0.0021  Score=58.58  Aligned_cols=98  Identities=18%  Similarity=0.256  Sum_probs=62.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCC----------------------cccccc--CCC--EEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAP----------------------ADFLRD--WGA--TVVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~----------------------~~~~~~--~~~--~~i~  133 (269)
                      +..++|+|.| .|++|+.+++.|+..|. ++++++++.-..                      .+.+.+  ..+  +.+.
T Consensus       133 l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        133 LLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             HhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            5668899998 59999999999999996 788888762110                      000111  122  3333


Q ss_pred             cCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      ..++ .+.+.++++++|+||++..          |...-..+-++|.+.++ .+|+.+
T Consensus       212 ~~~~-~~~~~~~~~~~D~Vv~~~d----------~~~~r~~ln~~~~~~~i-p~i~~~  257 (376)
T PRK08762        212 ERVT-SDNVEALLQDVDVVVDGAD----------NFPTRYLLNDACVKLGK-PLVYGA  257 (376)
T ss_pred             ccCC-hHHHHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEE
Confidence            3333 3456677889999999875          22223346677888775 455543

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=97.14  E-value=0.0065  Score=53.94  Aligned_cols=67  Identities=22%  Similarity=0.390  Sum_probs=52.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+++|.|.| .|.||+.+++.|..-|++|++.+|..+...      ++..    ....+++.++++++|+|+.+..
T Consensus       133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~----~~~~~~l~e~l~~aDvvv~~lP  199 (312)
T PRK15469        133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQS----FAGREELSAFLSQTRVLINLLP  199 (312)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Ccee----ecccccHHHHHhcCCEEEECCC
Confidence            47789999999 799999999999999999999988643211      1111    1135678899999999998876

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.14  E-value=0.0069  Score=50.18  Aligned_cols=102  Identities=18%  Similarity=0.283  Sum_probs=65.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCC---Cccc---------------------ccc--C--CCEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPA---PADF---------------------LRD--W--GATV  131 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~---~~~~---------------------~~~--~--~~~~  131 (269)
                      ++..+|+|.|+ |++|.++++.|+..|. ++++++.+.-.   ....                     +++  +  .++.
T Consensus        17 L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            56678999996 5699999999999995 68888765211   1000                     101  1  2344


Q ss_pred             EEcCCCC-CCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          132 VNADLSK-PETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       132 i~~Dl~d-~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      +..++.+ .+...+.+.++|+||.+..          +......+-+.|++.++ .+|+.++.+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~dvVi~~~d----------~~~~~~~ln~~c~~~~i-p~i~~~~~G  148 (198)
T cd01485          96 VEEDSLSNDSNIEEYLQKFTLVIATEE----------NYERTAKVNDVCRKHHI-PFISCATYG  148 (198)
T ss_pred             EecccccchhhHHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEEeec
Confidence            4444532 3456677788999997753          23333456778888876 666666544

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.14  E-value=0.0026  Score=59.77  Aligned_cols=76  Identities=21%  Similarity=0.190  Sum_probs=55.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC----ccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP----ADFLRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~----~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      .+.+++|+|+|+ |++|..+++.|.++|++|+++++++...    .+.+++.+++++.++-.+      ...++|.||..
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s   85 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVVTS   85 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEEC
Confidence            356789999995 8999999999999999999998754321    233455678777654322      23468999999


Q ss_pred             CCCCCCc
Q 024290          156 ATGRPEE  162 (269)
Q Consensus       156 ag~~~~~  162 (269)
                      .|..+..
T Consensus        86 ~Gi~~~~   92 (480)
T PRK01438         86 PGWRPDA   92 (480)
T ss_pred             CCcCCCC
Confidence            9865543

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.14  E-value=0.0014  Score=62.33  Aligned_cols=72  Identities=17%  Similarity=0.246  Sum_probs=48.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag  157 (269)
                      .+.+|+++|+|+ |++|++++..|++.|++|+++.|+.++..++....+...+  ++.   ++.+. ....|+|||++.
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~~~--~~~---~~~~~~~~~~diiINtT~  448 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQAL--TLA---DLENFHPEEGMILANTTS  448 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCcee--eHh---HhhhhccccCeEEEeccc
Confidence            466789999997 8999999999999999999999976554443322222222  221   22222 234688888876

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.13  E-value=0.00079  Score=62.20  Aligned_cols=72  Identities=21%  Similarity=0.370  Sum_probs=54.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      +.+++|+|+|+ |.+|..+++.|...| .+|++++|+.++..+.....+...+.     .+++.+.+.++|+||.+.+.
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~-----~~~l~~~l~~aDvVi~aT~s  250 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVK-----FEDLEEYLAEADIVISSTGA  250 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEee-----HHHHHHHHhhCCEEEECCCC
Confidence            66789999996 999999999999999 78999999865544333333333332     23566777899999999874

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.12  E-value=0.0047  Score=55.87  Aligned_cols=94  Identities=16%  Similarity=0.207  Sum_probs=55.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHH-CCCe---EEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALD-EGYD---VRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~-~G~~---V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      ++|.|.||||++|+.+++.|++ +.+.   ++.++...... ....-.+-.....++.+++.    +.++|++|.+++. 
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~-~~~~f~g~~~~v~~~~~~~~----~~~~Divf~a~~~-   75 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGG-AAPSFGGKEGTLQDAFDIDA----LKKLDIIITCQGG-   75 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCC-cccccCCCcceEEecCChhH----hcCCCEEEECCCH-
Confidence            6899999999999999995555 4565   66655532211 11111111222233333332    3679999999871 


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCC-eEEEeccc
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIH  193 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~SS~  193 (269)
                                .....+...+.++|.+ .+|=.|+.
T Consensus        76 ----------~~s~~~~~~~~~aG~~~~VID~Ss~  100 (369)
T PRK06598         76 ----------DYTNEVYPKLRAAGWQGYWIDAAST  100 (369)
T ss_pred             ----------HHHHHHHHHHHhCCCCeEEEECChH
Confidence                      2345566667777764 34545543

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.11  E-value=0.0027  Score=57.19  Aligned_cols=98  Identities=16%  Similarity=0.153  Sum_probs=62.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~a  156 (269)
                      .+.+|+|+|++|.+|..+++.+...|.+|+++++++++........++..+ .|..+.+.+.+.+     .++|++|++.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvD~v~d~v  236 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYKEEPDLDAALKRYFPEGIDIYFDNV  236 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEE-EECCCcccHHHHHHHHCCCCcEEEEECC
Confidence            467999999999999999999999999999888765543322123455433 2433322333222     3689999998


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      |.           ......++.++..  ++++.++..
T Consensus       237 G~-----------~~~~~~~~~l~~~--G~iv~~G~~  260 (348)
T PLN03154        237 GG-----------DMLDAALLNMKIH--GRIAVCGMV  260 (348)
T ss_pred             CH-----------HHHHHHHHHhccC--CEEEEECcc
Confidence            72           1112344444433  478877754

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.11  E-value=0.0027  Score=56.60  Aligned_cols=103  Identities=15%  Similarity=0.151  Sum_probs=66.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCcc-cc------ccCC--CEEEEcCCCCCCcHHHHhcCccE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD-FL------RDWG--ATVVNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~-~~------~~~~--~~~i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      ..+||.|+| +|.+|..++..++..|. +|++++++++.... .+      ...+  ..+..     ..+. +.++++|+
T Consensus         5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~-----~~d~-~~l~~aDi   77 (321)
T PTZ00082          5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG-----TNNY-EDIAGSDV   77 (321)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE-----CCCH-HHhCCCCE
Confidence            457899999 59999999999999995 89999997764311 11      0001  12221     1223 35689999


Q ss_pred             EEEcCCCCCC----------ccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          152 VIDCATGRPE----------EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       152 vi~~ag~~~~----------~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      ||.++|....          .+....|..-.+.+++.+.+...+ .++.+|
T Consensus        78 VI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~s  128 (321)
T PTZ00082         78 VIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVIT  128 (321)
T ss_pred             EEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999984221          123345666677777777777655 566655

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.10  E-value=0.0027  Score=56.28  Aligned_cols=100  Identities=14%  Similarity=0.085  Sum_probs=64.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCccc---cccC-----CCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADF---LRDW-----GATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~---~~~~-----~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      |||.|+|+ |.+|..++..|+.+|  .+|++++++.+.....   +.+.     ...+..      .+. +.++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~------~d~-~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA------GDY-ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee------CCH-HHhCCCCEEE
Confidence            47999997 999999999999999  6899999976543211   1111     111111      122 3478999999


Q ss_pred             EcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          154 DCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       154 ~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      .+++...     ..+....|..-.+.+++.+++.+.+ .++.++
T Consensus        73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9998532     1233445666677777777776544 344443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.10  E-value=0.005  Score=55.69  Aligned_cols=98  Identities=18%  Similarity=0.233  Sum_probs=64.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccc----------------------cc----cCCCEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF----------------------LR----DWGATVVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~----------------------~~----~~~~~~i~  133 (269)
                      ++..+|+|.|+ |++|..+++.|+..|. ++++++.+.-....+                      +.    ...++.+.
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            66789999995 9999999999999995 788887753111000                      00    11244444


Q ss_pred             cCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      .+++ .+...++++++|+||.+..          |+..-..+-++|.+.++ .+|+.+
T Consensus       105 ~~i~-~~~~~~~~~~~DvVvd~~d----------~~~~r~~~n~~c~~~~i-p~v~~~  150 (355)
T PRK05597        105 RRLT-WSNALDELRDADVILDGSD----------NFDTRHLASWAAARLGI-PHVWAS  150 (355)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEE
Confidence            5554 3455677889999999874          23333446677788775 455543

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.10  E-value=0.0023  Score=55.68  Aligned_cols=106  Identities=15%  Similarity=0.241  Sum_probs=69.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVID  154 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~  154 (269)
                      +-.+.+|+|.+|+|-+|+-+.+...-+|++|+.+.-.+++..-..+..++.. ..|..++ ++.+.+     +++|+.|.
T Consensus       148 pk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~-~idyk~~-d~~~~L~~a~P~GIDvyfe  225 (340)
T COG2130         148 PKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDA-GIDYKAE-DFAQALKEACPKGIDVYFE  225 (340)
T ss_pred             CCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCce-eeecCcc-cHHHHHHHHCCCCeEEEEE
Confidence            3457899999999999998887777789999999988766544333344432 2365554 444444     58999999


Q ss_pred             cCCCCCCccchhhcHHHHHHHHHHHHHc-C-CCeEEEecccCCCCCCCCc
Q 024290          155 CATGRPEEPIKKVDWEGKVALIQCAKAM-G-IQKYVFYSIHNCDKHPEVP  202 (269)
Q Consensus       155 ~ag~~~~~~~~~~n~~~~~~li~a~~~~-~-v~r~V~~SS~~~~~~~~~~  202 (269)
                      |.|..               +++++... + -.||+..+-++.++.+..+
T Consensus       226 NVGg~---------------v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~  260 (340)
T COG2130         226 NVGGE---------------VLDAVLPLLNLFARIPVCGAISQYNAPELP  260 (340)
T ss_pred             cCCch---------------HHHHHHHhhccccceeeeeehhhcCCCCCC
Confidence            99832               33333221 1 2488887766554444443

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=97.08  E-value=0.0064  Score=53.84  Aligned_cols=81  Identities=15%  Similarity=0.200  Sum_probs=52.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~  161 (269)
                      +.+|.|.||||++|..|++.|.++. .++..+..+...               |+.   .....+.++|+||.+...   
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~---------------~~~---~~~~~~~~~DvvFlalp~---   60 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK---------------DAA---ARRELLNAADVAILCLPD---   60 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC---------------ccc---CchhhhcCCCEEEECCCH---
Confidence            5689999999999999999998876 466666544221               111   122345678999988751   


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                              .....++..+.+.|+ ++|=.|+.
T Consensus        61 --------~~s~~~~~~~~~~g~-~VIDlSad   83 (313)
T PRK11863         61 --------DAAREAVALIDNPAT-RVIDASTA   83 (313)
T ss_pred             --------HHHHHHHHHHHhCCC-EEEECChh
Confidence                    223345555555564 66666654

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.08  E-value=0.0047  Score=51.12  Aligned_cols=100  Identities=21%  Similarity=0.311  Sum_probs=63.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCcc----------------------cccc----CCCEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD----------------------FLRD----WGATVVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~----------------------~~~~----~~~~~i~  133 (269)
                      ++.++|+|.|+ |++|.++++.|+..|. ++++++.+.-....                      .+++    ..++.+.
T Consensus        19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~   97 (197)
T cd01492          19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT   97 (197)
T ss_pred             HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            56788999995 6699999999999996 68888765211100                      0111    1233444


Q ss_pred             cCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      ..+.  +...+.++++|+||.+..          |...-..+-+.|++.++ .+|+.++.+
T Consensus        98 ~~~~--~~~~~~~~~~dvVi~~~~----------~~~~~~~ln~~c~~~~i-p~i~~~~~G  145 (197)
T cd01492          98 DDIS--EKPEEFFSQFDVVVATEL----------SRAELVKINELCRKLGV-KFYATGVHG  145 (197)
T ss_pred             cCcc--ccHHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEEecC
Confidence            4443  234566788999998753          23333456678888886 566666543

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=97.08  E-value=0.005  Score=52.85  Aligned_cols=71  Identities=31%  Similarity=0.458  Sum_probs=52.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc-cc-CCCEEEEcCCCCCCcHHHHh--cCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-RD-WGATVVNADLSKPETIPATL--VGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~-~~~~~i~~Dl~d~~~l~~~~--~~~d~vi~~ag  157 (269)
                      |+|||.|||+- |+.|++.|.++|+ |++.+-..- ..+.. .. ....++.+-+.+.+.+.+++  .+++.||+..-
T Consensus         1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~-g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATH   75 (249)
T PF02571_consen    1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSY-GGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATH   75 (249)
T ss_pred             CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhh-hHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCC
Confidence            68999999865 9999999999998 554443221 11222 11 35678888888899999998  47999999875

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.08  E-value=0.001  Score=66.86  Aligned_cols=147  Identities=16%  Similarity=0.266  Sum_probs=96.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeE-EEEeCCCCCC------ccccccCCCEEE--EcCCCCCCcHHHHhc------
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDV-RCLVRPRPAP------ADFLRDWGATVV--NADLSKPETIPATLV------  147 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V-~~~~R~~~~~------~~~~~~~~~~~i--~~Dl~d~~~l~~~~~------  147 (269)
                      .|..+|+||-|+.|..|++.|..+|.+- ++.+|+.-+.      ...+.+.++.+.  .-|++..+....+++      
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~ 1847 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLG 1847 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcc
Confidence            4779999999999999999999999755 4455643211      112233455443  346665565566653      


Q ss_pred             CccEEEEcCCC-----------CCCccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          148 GVHTVIDCATG-----------RPEEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       148 ~~d~vi~~ag~-----------~~~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      .+-.|||+|..           .+.++.-+..+.++.+|-+..++.  -.+.||..||...  ++.....||.+..+.|+
T Consensus      1848 ~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQtNYG~aNS~MER 1927 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQTNYGLANSAMER 1927 (2376)
T ss_pred             cccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcccccchhhHHHHH
Confidence            35677887762           122223333455666766666654  2458998888765  45566789999999999


Q ss_pred             HHHh---cCCCEEEEEcCcc
Q 024290          213 FLQD---SGLPHVIIRLWPY  229 (269)
Q Consensus       213 ~~~~---~gi~~~ilrp~~i  229 (269)
                      ++++   .|++-+.|.-|.|
T Consensus      1928 iceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1928 ICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             HHHHhhhcCCCcceeeeecc
Confidence            9954   6777776665544

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=97.06  E-value=0.00075  Score=48.77  Aligned_cols=66  Identities=20%  Similarity=0.370  Sum_probs=48.2

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCC---CeEEEE-eCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEG---YDVRCL-VRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G---~~V~~~-~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ||.|+| +|.+|.+|++.|++.|   ++|.+. .|++++..++.++.++.+..      .+..++++..|+||.+.-
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~advvilav~   70 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQEADVVILAVK   70 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHHHTSEEEE-S-
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc------CChHHhhccCCEEEEEEC
Confidence            577886 7999999999999999   999965 88877666655555544432      234566678899999875

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.04  E-value=0.0045  Score=56.41  Aligned_cols=55  Identities=25%  Similarity=0.363  Sum_probs=44.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ..++|.|+||.|.+|..++..|.+.|++|++.+|+..                     +...+++.++|+||.+..
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~---------------------~~~~~~~~~aDlVilavP  151 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW---------------------DRAEDILADAGMVIVSVP  151 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc---------------------hhHHHHHhcCCEEEEeCc
Confidence            3478999999999999999999999999999998521                     133455677888888875

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.02  E-value=0.0033  Score=56.73  Aligned_cols=106  Identities=16%  Similarity=0.113  Sum_probs=66.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCE------EEEcCCCCCCcHHHHhcCccE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGAT------VVNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~------~i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      |||.|+| +|++|.-.+-.|++.||+|++++.++.+...+-.      +++++      .-.+-+.--.+.+++++..|+
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv   79 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV   79 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence            5799998 8999999999999999999999998654322110      11100      001112223456777888999


Q ss_pred             EEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          152 VIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       152 vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      +|.+.|....+ .-..|+.....+++...+...+ ++|.+=
T Consensus        80 ~fIavgTP~~~-dg~aDl~~V~ava~~i~~~~~~~~vvV~K  119 (414)
T COG1004          80 VFIAVGTPPDE-DGSADLSYVEAVAKDIGEILDGKAVVVIK  119 (414)
T ss_pred             EEEEcCCCCCC-CCCccHHHHHHHHHHHHhhcCCCeEEEEc
Confidence            99999855443 3334555555555555544333 555553

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.02  E-value=0.0012  Score=58.67  Aligned_cols=74  Identities=18%  Similarity=0.339  Sum_probs=54.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      +.+++|+|+|+ |.+|..+++.|...| .+|++++|++++..++..+.+...+.     .+++.+.+.++|+||.+.+..
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~-----~~~~~~~l~~aDvVi~at~~~  249 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVP-----LDELLELLNEADVVISATGAP  249 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEe-----HHHHHHHHhcCCEEEECCCCC
Confidence            56789999996 999999999999876 68899999866554444444443322     235667778899999998844


Q ss_pred             C
Q 024290          160 P  160 (269)
Q Consensus       160 ~  160 (269)
                      .
T Consensus       250 ~  250 (311)
T cd05213         250 H  250 (311)
T ss_pred             c
Confidence            3

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.02  E-value=0.00071  Score=58.79  Aligned_cols=71  Identities=17%  Similarity=0.307  Sum_probs=48.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC---CCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW---GATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~---~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ..+++++|+|+ |++|++++..|++.|++|+++.|+.++..+..+..   +. ....++.+     ..+.++|+||++.+
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~-~~~~~~~~-----~~~~~~DivInatp  187 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGE-IQAFSMDE-----LPLHRVDLIINATS  187 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCc-eEEechhh-----hcccCccEEEECCC
Confidence            44689999997 89999999999999999999999765543322221   11 11112111     12356899999987


Q ss_pred             C
Q 024290          158 G  158 (269)
Q Consensus       158 ~  158 (269)
                      .
T Consensus       188 ~  188 (270)
T TIGR00507       188 A  188 (270)
T ss_pred             C
Confidence            4

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.01  E-value=0.0055  Score=54.61  Aligned_cols=97  Identities=20%  Similarity=0.202  Sum_probs=67.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~  161 (269)
                      .+++|+|+|+ |++|...++.+...|.+|++++|++++... .++.++..+...- |++.++.+-+.+|++|.+++ ...
T Consensus       166 pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~-a~~lGAd~~i~~~-~~~~~~~~~~~~d~ii~tv~-~~~  241 (339)
T COG1064         166 PGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLEL-AKKLGADHVINSS-DSDALEAVKEIADAIIDTVG-PAT  241 (339)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHH-HHHhCCcEEEEcC-CchhhHHhHhhCcEEEECCC-hhh
Confidence            4689999997 599999999999999999999998765432 3445555444322 66666655555999999987 211


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                                ....++.++..  ++++.++-..
T Consensus       242 ----------~~~~l~~l~~~--G~~v~vG~~~  262 (339)
T COG1064         242 ----------LEPSLKALRRG--GTLVLVGLPG  262 (339)
T ss_pred             ----------HHHHHHHHhcC--CEEEEECCCC
Confidence                      12344455544  4888888764

>PLN02602 lactate dehydrogenase

Probab=97.01  E-value=0.0044  Score=55.84  Aligned_cols=106  Identities=16%  Similarity=0.123  Sum_probs=66.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCccccccC-CC-EEE-EcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRDW-GA-TVV-NADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~~~~-~~-~~i-~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      +||.|+|+ |.+|..++-.|+..|  .++++++.+++.......+. .. .+. ...+....+. +.++++|+||.+||.
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy-~~~~daDiVVitAG~  115 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDY-AVTAGSDLCIVTAGA  115 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCH-HHhCCCCEEEECCCC
Confidence            69999995 999999999999887  47999998765432211110 00 000 0112111122 347899999999995


Q ss_pred             CC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          159 RP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       159 ~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      ..     ..+....|..-.+.+++.+++.+.+ .+|.+|
T Consensus       116 ~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        116 RQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            32     2344556777777788888777654 455554

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.00  E-value=0.0028  Score=52.66  Aligned_cols=72  Identities=13%  Similarity=0.241  Sum_probs=49.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-ccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+++|+|+|| |-+|...++.|++.|++|+++.+..... .+......+.+..-++.     ...+.++|+||-+.+
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~-----~~~l~~adlViaaT~   79 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFE-----PSDIVDAFLVIAATN   79 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCC-----hhhcCCceEEEEcCC
Confidence            478899999996 9999999999999999999998643221 22222223444433322     233567898887765

>cd08230 glucose_DH Glucose dehydrogenase

Probab=97.00  E-value=0.005  Score=55.41  Aligned_cols=98  Identities=20%  Similarity=0.264  Sum_probs=62.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC--CCCccccccCCCEEEEcCCCCCCcH-HHHhcCccEEEEcCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR--PAPADFLRDWGATVVNADLSKPETI-PATLVGVHTVIDCATG  158 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~--~~~~~~~~~~~~~~i~~Dl~d~~~l-~~~~~~~d~vi~~ag~  158 (269)
                      .+.+|+|+|+ |.+|...++.+...|.+|++++|+.  +...+.+++.++..+  |..+.+.. .....++|+||.++|.
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v--~~~~~~~~~~~~~~~~d~vid~~g~  248 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV--NSSKTPVAEVKLVGEFDLIIEATGV  248 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe--cCCccchhhhhhcCCCCEEEECcCC
Confidence            4678999985 9999999998888999999999842  223334455677654  44332211 1123468999999983


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      .          ......++.++..  ++++.++...
T Consensus       249 ~----------~~~~~~~~~l~~~--G~~v~~G~~~  272 (355)
T cd08230         249 P----------PLAFEALPALAPN--GVVILFGVPG  272 (355)
T ss_pred             H----------HHHHHHHHHccCC--cEEEEEecCC
Confidence            2          1112334444443  4788777643

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=96.99  E-value=0.0051  Score=56.00  Aligned_cols=98  Identities=17%  Similarity=0.213  Sum_probs=64.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~  161 (269)
                      .+.+|+|.|+ |.+|..+++.+...|.+|++++++.++..+..++.++..+ .|..+.+.+.+...++|+||.+.|..  
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~-i~~~~~~~v~~~~~~~D~vid~~G~~--  253 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSF-LVTTDSQKMKEAVGTMDFIIDTVSAE--  253 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEE-EcCcCHHHHHHhhCCCcEEEECCCcH--
Confidence            4678999885 9999999999999999999988765543444445566433 24333344555556789999998721  


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                              ......++.++..  ++++.++..
T Consensus       254 --------~~~~~~~~~l~~~--G~iv~vG~~  275 (375)
T PLN02178        254 --------HALLPLFSLLKVS--GKLVALGLP  275 (375)
T ss_pred             --------HHHHHHHHhhcCC--CEEEEEccC
Confidence                    1112344444433  478877754

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.99  E-value=0.0011  Score=61.27  Aligned_cols=73  Identities=18%  Similarity=0.431  Sum_probs=53.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      +.+++|+|+|+ |.+|..+++.|...|. +|++..|+.++...+....+..++     +.+++.+.+.++|+||.+.+..
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~-----~~~~~~~~l~~aDvVI~aT~s~  253 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAI-----PLDELPEALAEADIVISSTGAP  253 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEe-----eHHHHHHHhccCCEEEECCCCC
Confidence            56789999995 9999999999999997 899999976554433333333222     2245566778899999998743

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.99  E-value=0.0084  Score=53.12  Aligned_cols=99  Identities=10%  Similarity=0.128  Sum_probs=67.0

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccc---ccc-------CCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           85 SILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADF---LRD-------WGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~---~~~-------~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      ||.|+|+ |.+|..++..|+.+|.  ++++++.+.+.....   +.+       ..+.+..+|       .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            5889997 9999999999998884  799999875533211   111       012222222       4567899999


Q ss_pred             EEcCCCCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          153 IDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       153 i~~ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      |.+||...       ..+.+..|..-.+.+++.+++.+..-++.+-
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivv  118 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILI  118 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence            99999421       1445567888888888888888755444433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.99  E-value=0.0047  Score=54.43  Aligned_cols=98  Identities=16%  Similarity=0.143  Sum_probs=63.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH---h--cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---L--VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~---~--~~~d~vi~~a  156 (269)
                      .+.+++|+|+++.+|..+++.+...|++|++++++.++... +...+... ..|..+.+....+   .  .++|.+++++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~  243 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLER-AKELGADY-VIDYRKEDFVREVRELTGKRGVDVVVEHV  243 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHcCCCe-EEecCChHHHHHHHHHhCCCCCcEEEECC
Confidence            45789999999999999999999999999999887544322 22223222 2344444333322   2  3689999999


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      |..           .....++.++..  ++++.+++..
T Consensus       244 g~~-----------~~~~~~~~l~~~--G~~v~~~~~~  268 (342)
T cd08266         244 GAA-----------TWEKSLKSLARG--GRLVTCGATT  268 (342)
T ss_pred             cHH-----------HHHHHHHHhhcC--CEEEEEecCC
Confidence            831           112344444433  5899887654

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.99  E-value=0.0043  Score=54.94  Aligned_cols=106  Identities=14%  Similarity=0.065  Sum_probs=65.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccc-c--ccCC-CEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF-L--RDWG-ATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~-~--~~~~-~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      +||.|+|+ |.+|..++..|+..|+ +|+++++.++..... +  .+.. .......+.-..++.. ++++|+||-++|.
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~   79 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL   79 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence            57999996 9999999999999886 899999864422211 0  0100 0000111211123333 5789999999994


Q ss_pred             CCCc-----cchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          159 RPEE-----PIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       159 ~~~~-----~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      ....     +....|..-...+++.+.+.+.. .+|.+|
T Consensus        80 p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~t  118 (305)
T TIGR01763        80 PRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVS  118 (305)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            3221     34456777777788877776543 455555

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.99  E-value=0.0026  Score=56.43  Aligned_cols=101  Identities=13%  Similarity=0.065  Sum_probs=65.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCcccc---ccC----C-CEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFL---RDW----G-ATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~---~~~----~-~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      +||.|+|+ |.+|..++-.|+..|  .++++++.+.+......   .+.    . ..+..     ..+.+ .++++|+||
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~-----~~dy~-~~~~adivv   76 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA-----DKDYS-VTANSKVVI   76 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE-----CCCHH-HhCCCCEEE
Confidence            48999996 999999999998887  47999998765322111   110    1 12221     12233 368999999


Q ss_pred             EcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          154 DCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       154 ~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      .++|...     ..+.+..|..-.+.+.+.+++.+.+ .++.+|
T Consensus        77 itaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          77 VTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            9999522     2244566777777788888777644 444444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.99  E-value=0.0043  Score=54.80  Aligned_cols=97  Identities=15%  Similarity=0.205  Sum_probs=62.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCc---HHHHh-cCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPET---IPATL-VGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~---l~~~~-~~~d~vi~~ag  157 (269)
                      .+.+|+|+||+|.+|..+++.+...|.+|+++++++++. +.+++.++..+ .|..+.+.   +.+.. .++|+|+++.|
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~-~~l~~~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~~g  220 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKV-AWLKELGFDAV-FNYKTVSLEEALKEAAPDGIDCYFDNVG  220 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHcCCCEE-EeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence            467999999999999999999999999999988875543 33344555433 34443322   22222 36899999987


Q ss_pred             CCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       158 ~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      .           ......++.++..  ++|+.++..
T Consensus       221 ~-----------~~~~~~~~~l~~~--G~iv~~g~~  243 (329)
T cd08294         221 G-----------EFSSTVLSHMNDF--GRVAVCGSI  243 (329)
T ss_pred             H-----------HHHHHHHHhhccC--CEEEEEcch
Confidence            2           1112334444333  478877643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.97  E-value=0.0047  Score=55.01  Aligned_cols=74  Identities=26%  Similarity=0.292  Sum_probs=50.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc----------ccCCCE--EEEcCCCCCCcHHHHhcCcc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----------RDWGAT--VVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~----------~~~~~~--~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      .++|.|+| +|-+|..++..|+..|++|++.+++++......          .+.+..  .....+.-..+++++++++|
T Consensus         7 i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD   85 (321)
T PRK07066          7 IKTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD   85 (321)
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence            46899999 599999999999999999999999765322110          011110  00112222346778889999


Q ss_pred             EEEEcCC
Q 024290          151 TVIDCAT  157 (269)
Q Consensus       151 ~vi~~ag  157 (269)
                      .|+-+..
T Consensus        86 lViEavp   92 (321)
T PRK07066         86 FIQESAP   92 (321)
T ss_pred             EEEECCc
Confidence            9999875

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.95  E-value=0.0022  Score=59.25  Aligned_cols=40  Identities=18%  Similarity=0.112  Sum_probs=34.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA  121 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~  121 (269)
                      |.+|+|.|+| .|++|..++..|++.|++|+++++++++..
T Consensus         1 m~~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~   40 (415)
T PRK11064          1 MSFETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVD   40 (415)
T ss_pred             CCccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence            3457899998 699999999999999999999999876544

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.94  E-value=0.0027  Score=57.82  Aligned_cols=68  Identities=24%  Similarity=0.302  Sum_probs=54.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      |++|+|.|+ |.+|+.++..+.+.|++|++++.++........   -..+.+|+.|.+.+.++.+.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a---d~~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA---DEVIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC---ceEEecCCCCHHHHHHHHhcCCEEEe
Confidence            578999996 899999999999999999999987554333222   24667899999999999999998753

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.94  E-value=0.0009  Score=54.45  Aligned_cols=70  Identities=19%  Similarity=0.236  Sum_probs=49.6

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      ..+.+++|.|+| .|.||+++++.|..-|.+|++.+|....... ....+        ....++++++..+|+|+.+...
T Consensus        32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~-~~~~~--------~~~~~l~ell~~aDiv~~~~pl  101 (178)
T PF02826_consen   32 RELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEG-ADEFG--------VEYVSLDELLAQADIVSLHLPL  101 (178)
T ss_dssp             S-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHH-HHHTT--------EEESSHHHHHHH-SEEEE-SSS
T ss_pred             cccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhh-ccccc--------ceeeehhhhcchhhhhhhhhcc
Confidence            358899999999 6999999999999999999999997543220 01111        1245777888889999887763

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.94  E-value=0.0052  Score=57.75  Aligned_cols=77  Identities=21%  Similarity=0.250  Sum_probs=54.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      .+.+++|+|.| .|..|.++++.|+++|++|++.+++.....+.+...++++..++-. .    ..+.++|.||...|..
T Consensus        12 ~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~-~----~~~~~~d~vV~Spgi~   85 (473)
T PRK00141         12 QELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEA-S----DQLDSFSLVVTSPGWR   85 (473)
T ss_pred             cccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCc-h----hHhcCCCEEEeCCCCC
Confidence            35678899999 6999999999999999999999986543333234446766654211 1    2235789999999865


Q ss_pred             CCc
Q 024290          160 PEE  162 (269)
Q Consensus       160 ~~~  162 (269)
                      +..
T Consensus        86 ~~~   88 (473)
T PRK00141         86 PDS   88 (473)
T ss_pred             CCC
Confidence            543

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.94  E-value=0.011  Score=52.26  Aligned_cols=34  Identities=29%  Similarity=0.508  Sum_probs=30.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      +|+|.|.| +|.+|..+++.|.+.|++|++.+|+.
T Consensus         4 ~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~   37 (308)
T PRK14619          4 PKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRS   37 (308)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            46899998 69999999999999999999999974

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.94  E-value=0.0067  Score=51.55  Aligned_cols=96  Identities=8%  Similarity=0.165  Sum_probs=61.4

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCC---Ccc-c------------------c----ccCCCEEEEcCCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPA---PAD-F------------------L----RDWGATVVNADLS  137 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~---~~~-~------------------~----~~~~~~~i~~Dl~  137 (269)
                      +|+|.| .|++|.++++.|+..|. ++++++.+.-+   +.. .                  +    ...+++.+..++.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            489998 59999999999999995 77888775211   100 0                  0    0112455666665


Q ss_pred             CCCcH-HHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          138 KPETI-PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       138 d~~~l-~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      +.++. ..+++++|+||.+..          |+..-..+-+.|.+.++ .+|..++
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~D----------n~~aR~~ln~~c~~~~i-plI~~g~  124 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALD----------NIIARRYVNGMLIFLIV-PLIESGT  124 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEcc
Confidence            43332 456788999998763          34444556677777764 4555554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.93  E-value=0.0086  Score=54.45  Aligned_cols=93  Identities=20%  Similarity=0.312  Sum_probs=62.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCC---CCccc-------------------cc----cCCCEEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRP---APADF-------------------LR----DWGATVV  132 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~---~~~~~-------------------~~----~~~~~~i  132 (269)
                      .+...+|+|+| .|++|..+++.|+..|. ++++++.+.-   ++...                   +.    ...++.+
T Consensus        38 ~l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            36678899999 59999999999999995 8888887521   11100                   00    1124444


Q ss_pred             EcCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCC
Q 024290          133 NADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGI  184 (269)
Q Consensus       133 ~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v  184 (269)
                      ...++ .+.+.++++++|+||.|..          |+..-..+-++|.+.++
T Consensus       117 ~~~i~-~~~~~~~~~~~DlVid~~D----------n~~~r~~in~~~~~~~i  157 (370)
T PRK05600        117 RERLT-AENAVELLNGVDLVLDGSD----------SFATKFLVADAAEITGT  157 (370)
T ss_pred             eeecC-HHHHHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC
Confidence            44454 4456778899999999874          34444455677777775

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.93  E-value=0.012  Score=47.78  Aligned_cols=93  Identities=15%  Similarity=0.150  Sum_probs=57.0

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCC---CCCcc------------------ccc----cCCCEEEEcCCCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGY-DVRCLVRPR---PAPAD------------------FLR----DWGATVVNADLSK  138 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~---~~~~~------------------~~~----~~~~~~i~~Dl~d  138 (269)
                      +|+|.| .|++|..+++.|+..|. ++++++.+.   +.+..                  .+.    ..+++.+...+++
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            489999 59999999999999997 699998864   11110                  000    0123333444433


Q ss_pred             CCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHc-CCCeEEEe
Q 024290          139 PETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAM-GIQKYVFY  190 (269)
Q Consensus       139 ~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~  190 (269)
                       +.+.++++++|+||.+..          |...-..+.+.+.+. ++ .+|+.
T Consensus        80 -~~~~~~l~~~DlVi~~~d----------~~~~r~~i~~~~~~~~~i-p~i~~  120 (174)
T cd01487          80 -NNLEGLFGDCDIVVEAFD----------NAETKAMLAESLLGNKNK-PVVCA  120 (174)
T ss_pred             -hhHHHHhcCCCEEEECCC----------CHHHHHHHHHHHHHHCCC-CEEEE
Confidence             456677788888888743          223334466666665 54 45544

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.92  E-value=0.0065  Score=53.22  Aligned_cols=74  Identities=18%  Similarity=0.232  Sum_probs=49.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc---------CCCEEEE--------cCCCCCCcHHHH
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD---------WGATVVN--------ADLSKPETIPAT  145 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~---------~~~~~i~--------~Dl~d~~~l~~~  145 (269)
                      .++|.|+| +|.+|..++..|+..|++|++.+++++...+....         .+.....        ..+.-.+++.++
T Consensus         3 ~~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a   81 (287)
T PRK08293          3 IKNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEA   81 (287)
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHH
Confidence            36899999 49999999999999999999999986543221100         0000000        111112456677


Q ss_pred             hcCccEEEEcCC
Q 024290          146 LVGVHTVIDCAT  157 (269)
Q Consensus       146 ~~~~d~vi~~ag  157 (269)
                      ++++|+||.+..
T Consensus        82 ~~~aDlVieavp   93 (287)
T PRK08293         82 VKDADLVIEAVP   93 (287)
T ss_pred             hcCCCEEEEecc
Confidence            889999999875

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.90  E-value=0.004  Score=54.32  Aligned_cols=56  Identities=13%  Similarity=0.269  Sum_probs=46.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+++|+|+|.++.+|+.++..|.++|..|+++.++.                      .++.+.+..+|+||...|
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------~~l~~~~~~ADIVIsAvg  210 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------KDMASYLKDADVIVSAVG  210 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHHHhhCCEEEECCC
Confidence            58899999999999999999999999999999988742                      235556667777777776

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.89  E-value=0.0057  Score=53.22  Aligned_cols=70  Identities=17%  Similarity=0.277  Sum_probs=46.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEE-eCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDE--GYDVRCL-VRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~--G~~V~~~-~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |.+++|.|+| .|.||+.+++.|.+.  ++++.++ +|++++..+.....+..      .-.+++++++.++|+|+-|++
T Consensus         4 m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~------~~~~~~eell~~~D~Vvi~tp   76 (271)
T PRK13302          4 RPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRP------PPVVPLDQLATHADIVVEAAP   76 (271)
T ss_pred             CCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCC------cccCCHHHHhcCCCEEEECCC
Confidence            5668999999 699999999999873  7888755 55443332222221210      112345666778999999987

>PRK07877 hypothetical protein; Provisional

Probab=96.89  E-value=0.0061  Score=59.80  Aligned_cols=98  Identities=21%  Similarity=0.231  Sum_probs=68.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCC---CCCcccc----------------------ccCCCEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPR---PAPADFL----------------------RDWGATVVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~---~~~~~~~----------------------~~~~~~~i~  133 (269)
                      +...+|+|+|. | +|+.++..|+..|.  ++++++.+.   +++...+                      ....++.+.
T Consensus       105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~  182 (722)
T PRK07877        105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT  182 (722)
T ss_pred             HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence            56789999998 7 99999999999994  888888752   1111110                      011355566


Q ss_pred             cCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      ..++ .+.+.++++++|+||.|.-          |+..-..+-++|.+.++ -+|+-++
T Consensus       183 ~~i~-~~n~~~~l~~~DlVvD~~D----------~~~~R~~ln~~a~~~~i-P~i~~~~  229 (722)
T PRK07877        183 DGLT-EDNVDAFLDGLDVVVEECD----------SLDVKVLLREAARARRI-PVLMATS  229 (722)
T ss_pred             ccCC-HHHHHHHhcCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEcC
Confidence            6665 5778888999999999974          34444456678888876 5555554

>PRK10537 voltage-gated potassium channel; Provisional

Probab=96.89  E-value=0.01  Score=54.40  Aligned_cols=71  Identities=11%  Similarity=0.126  Sum_probs=55.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag  157 (269)
                      +..++|.| .|.+|+.+++.|.++|++|++++.+..   +.....+..++.+|.+|++.++++ +++++.|+-+..
T Consensus       240 k~HvII~G-~g~lg~~v~~~L~~~g~~vvVId~d~~---~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t~  311 (393)
T PRK10537        240 KDHFIICG-HSPLAINTYLGLRQRGQAVTVIVPLGL---EHRLPDDADLIPGDSSDSAVLKKAGAARARAILALRD  311 (393)
T ss_pred             CCeEEEEC-CChHHHHHHHHHHHCCCCEEEEECchh---hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcCC
Confidence            45799998 589999999999999999999886421   222334688999999999888776 467898887654

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.87  E-value=0.016  Score=51.31  Aligned_cols=96  Identities=13%  Similarity=0.237  Sum_probs=62.7

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccc----------------------cc----cCCCEEEEcCCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF----------------------LR----DWGATVVNADLS  137 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~----------------------~~----~~~~~~i~~Dl~  137 (269)
                      +|+|.|+ |++|.++++.|+..|. ++++++.+.-+...+                      +.    ...++.+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5899995 9999999999999995 778877653211100                      01    113555666776


Q ss_pred             CCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          138 KPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       138 d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      +.+...+.+++.|+||.+..          |...-..+-+.|.+.++ .+|..++
T Consensus        80 ~~~~~~~f~~~~DvVv~a~D----------n~~ar~~in~~c~~~~i-p~I~~gt  123 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALD----------NLAARRHVNKMCLAADV-PLIESGT  123 (312)
T ss_pred             CccchHHHHhcCCEEEECCC----------CHHHHHHHHHHHHHCCC-CEEEEec
Confidence            65445577889999998863          33444456677777765 4555544

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.85  E-value=0.004  Score=57.44  Aligned_cols=68  Identities=15%  Similarity=0.087  Sum_probs=51.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+++|+|+|. |.||+.+++.|...|.+|++.++++.+..+.. ..++++.        .+.++++++|+||.+.|
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~v~--------~l~eal~~aDVVI~aTG  276 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFRVM--------TMEEAAELGDIFVTATG  276 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCEec--------CHHHHHhCCCEEEECCC
Confidence            367899999995 99999999999999999999998765532211 1233321        24566778999999876

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.84  E-value=0.021  Score=51.18  Aligned_cols=70  Identities=17%  Similarity=0.197  Sum_probs=42.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G---~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ++++|.|.||||++|..+++.|.++.   .++..+....+..... ...+.. +..+  +.+.  ..+.++|++|.+++
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~-~~~~~~-~~v~--~~~~--~~~~~~Dvvf~a~p   75 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETL-RFGGKS-VTVQ--DAAE--FDWSQAQLAFFVAG   75 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceE-EECCcc-eEEE--eCch--hhccCCCEEEECCC
Confidence            45789999999999999999999853   4666665543322221 111111 1111  1221  12357899998876

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.83  E-value=0.0082  Score=54.02  Aligned_cols=33  Identities=24%  Similarity=0.481  Sum_probs=28.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVRP  116 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~  116 (269)
                      ++|.|+|++|++|++|++.|.+.+ .+++.+..+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~   34 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS   34 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence            479999999999999999998876 688887443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.81  E-value=0.0084  Score=44.14  Aligned_cols=89  Identities=22%  Similarity=0.266  Sum_probs=58.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      .+++++|+|+|+ |.+|..-++.|++.|.+|++++...    +.. +..+++..-++      +..+++.|.||-+.+  
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~----~~~-~~~i~~~~~~~------~~~l~~~~lV~~at~--   69 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI----EFS-EGLIQLIRREF------EEDLDGADLVFAATD--   69 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE----HHH-HTSCEEEESS-------GGGCTTESEEEE-SS--
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch----hhh-hhHHHHHhhhH------HHHHhhheEEEecCC--
Confidence            467899999996 9999999999999999999998864    101 12344444333      334678898886654  


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                              |-.-...+.+.|++.+  .+|++..
T Consensus        70 --------d~~~n~~i~~~a~~~~--i~vn~~D   92 (103)
T PF13241_consen   70 --------DPELNEAIYADARARG--ILVNVVD   92 (103)
T ss_dssp             ---------HHHHHHHHHHHHHTT--SEEEETT
T ss_pred             --------CHHHHHHHHHHHhhCC--EEEEECC
Confidence                    1223355777887765  4666654

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.81  E-value=0.0045  Score=54.32  Aligned_cols=40  Identities=13%  Similarity=0.233  Sum_probs=36.0

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      .++.+|+|.|+|.+|.+|+.++..|+++|+.|++..+...
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~  194 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST  194 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence            3588999999999999999999999999999999977543

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.78  E-value=0.012  Score=53.89  Aligned_cols=97  Identities=14%  Similarity=0.221  Sum_probs=61.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCC---Ccc-c------------------ccc----CCCEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPA---PAD-F------------------LRD----WGATVVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~---~~~-~------------------~~~----~~~~~i~  133 (269)
                      +...+|+|+| .|++|..+++.|+..|. ++++++.+.-.   +.. .                  +.+    ..++.+.
T Consensus        40 L~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         40 LKNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             HhcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            5677899999 59999999999999996 67777764211   100 0                  001    1233344


Q ss_pred             cCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                      .+++ .+.+.++++++|+||.+..          |...-..+-++|.+.++ .+|+.
T Consensus       119 ~~i~-~~~~~~~~~~~D~Vvd~~d----------~~~~r~~ln~~~~~~~~-p~v~~  163 (392)
T PRK07878        119 FRLD-PSNAVELFSQYDLILDGTD----------NFATRYLVNDAAVLAGK-PYVWG  163 (392)
T ss_pred             ccCC-hhHHHHHHhcCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEE
Confidence            4554 3456677889999998874          23333346677777775 35443

>PLN00203 glutamyl-tRNA reductase

Probab=96.78  E-value=0.0017  Score=61.40  Aligned_cols=75  Identities=16%  Similarity=0.355  Sum_probs=54.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccC-CCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~-~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      +.+++|+|+|+ |.+|..+++.|...|. +|+++.|+.++...+.... +..+..   ...+++.+++.++|+||.+.+.
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~---~~~~dl~~al~~aDVVIsAT~s  339 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIY---KPLDEMLACAAEADVVFTSTSS  339 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEe---ecHhhHHHHHhcCCEEEEccCC
Confidence            67899999996 9999999999999996 7999999876554433322 222221   2234566778899999998764


Q ss_pred             C
Q 024290          159 R  159 (269)
Q Consensus       159 ~  159 (269)
                      .
T Consensus       340 ~  340 (519)
T PLN00203        340 E  340 (519)
T ss_pred             C
Confidence            3

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.78  E-value=0.0086  Score=53.61  Aligned_cols=96  Identities=14%  Similarity=0.173  Sum_probs=62.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh---cCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL---VGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~---~~~d~vi~~ag  157 (269)
                      .+.+|+|+|+ |.+|...++.+...|. +|+++++++++. +.+++.++..+ .|..+. ++.+..   .++|+||.++|
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~-~~a~~lGa~~v-i~~~~~-~~~~~~~~~g~~D~vid~~G  244 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSL-SLAREMGADKL-VNPQND-DLDHYKAEKGYFDVSFEVSG  244 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHH-HHHHHcCCcEE-ecCCcc-cHHHHhccCCCCCEEEECCC
Confidence            4679999986 9999999999989998 688888876544 33445666543 344432 233332   24899999998


Q ss_pred             CCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       158 ~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      ..          ......++.++..  +++|.++..
T Consensus       245 ~~----------~~~~~~~~~l~~~--G~iv~~G~~  268 (343)
T PRK09880        245 HP----------SSINTCLEVTRAK--GVMVQVGMG  268 (343)
T ss_pred             CH----------HHHHHHHHHhhcC--CEEEEEccC
Confidence            31          1122344555543  488888753

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=96.77  E-value=0.022  Score=54.16  Aligned_cols=137  Identities=20%  Similarity=0.199  Sum_probs=84.4

Q ss_pred             CCCCCEEEEECCC-cHHHHHHHHHHHHCCCeEEEEeCCCCCC-ccccc-------cCC--CEEEEcCCCCCCcHHHHhc-
Q 024290           80 PVRPTSILVVGAT-GTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFLR-------DWG--ATVVNADLSKPETIPATLV-  147 (269)
Q Consensus        80 ~~~~~~vlVtGat-G~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~~~-------~~~--~~~i~~Dl~d~~~l~~~~~-  147 (269)
                      ....+.++||||+ |-||.++++.|++-|..|++.+.+-++. .+..+       ..+  .-++..+.....+++.+++ 
T Consensus       393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew  472 (866)
T COG4982         393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW  472 (866)
T ss_pred             CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence            4667899999987 8899999999999999999987653321 11111       112  3345566665556655541 


Q ss_pred             --------------------CccEEEEcCCCCCCc----------cchhhcHHHHHHHHHHHHHcC----CC---eEEEe
Q 024290          148 --------------------GVHTVIDCATGRPEE----------PIKKVDWEGKVALIQCAKAMG----IQ---KYVFY  190 (269)
Q Consensus       148 --------------------~~d~vi~~ag~~~~~----------~~~~~n~~~~~~li~a~~~~~----v~---r~V~~  190 (269)
                                          ..|.+|-.|++....          ..+.+-+....+++-.+++.+    +.   ++|.-
T Consensus       473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLP  552 (866)
T COG4982         473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLP  552 (866)
T ss_pred             hccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEec
Confidence                                136666666532111          112233444556666665543    22   56666


Q ss_pred             cccCCC-CCCCCcHHHHHHHHHHHHHh
Q 024290          191 SIHNCD-KHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       191 SS~~~~-~~~~~~y~~sK~~~e~~~~~  216 (269)
                      .|.+-. ......|+.+|.+++.++.+
T Consensus       553 gSPNrG~FGgDGaYgEsK~aldav~~R  579 (866)
T COG4982         553 GSPNRGMFGGDGAYGESKLALDAVVNR  579 (866)
T ss_pred             CCCCCCccCCCcchhhHHHHHHHHHHH
Confidence            665532 34456799999999988743

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=96.76  E-value=0.0044  Score=55.68  Aligned_cols=89  Identities=22%  Similarity=0.225  Sum_probs=67.8

Q ss_pred             cCccEEEEcCCCCC------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCCC-CCCCcHHHHHHHHHHHHH
Q 024290          147 VGVHTVIDCATGRP------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK-HPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       147 ~~~d~vi~~ag~~~------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~~-~~~~~y~~sK~~~e~~~~  215 (269)
                      .+++.+|.+.|...      ......++..-+..|+++..    +.+.+++|.++|.+... ....+|...|..+|+-++
T Consensus       202 ~~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~~~~s~~f~Yfk~K~~LE~dl~  281 (410)
T PF08732_consen  202 DDIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNNNAISSMFPYFKTKGELENDLQ  281 (410)
T ss_pred             hhhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCCCceEEEEEecCcchhhhhhhhhHHHHHHHHHHH
Confidence            35678888888422      23444677777778888877    67889999999988655 455799999999999887


Q ss_pred             hc--C-C-CEEEEEcCcccccCcc
Q 024290          216 DS--G-L-PHVIIRLWPYWAICST  235 (269)
Q Consensus       216 ~~--g-i-~~~ilrp~~i~g~~~~  235 (269)
                      ..  + + ..+|+|||.+.|.-..
T Consensus       282 ~~l~~~l~~lvILRPGplvG~h~~  305 (410)
T PF08732_consen  282 NLLPPKLKHLVILRPGPLVGEHGS  305 (410)
T ss_pred             hhcccccceEEEecCccccCCCCC
Confidence            63  2 3 5899999999998655

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.76  E-value=0.002  Score=60.52  Aligned_cols=72  Identities=17%  Similarity=0.307  Sum_probs=49.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+.+++++|+|+ |++|++++..|.+.|++|++..|+.++..+..+..+...  .++.+.+    .+.++|+||+|...
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~--~~~~~~~----~l~~~DiVInatP~  400 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKA--FPLESLP----ELHRIDIIINCLPP  400 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccce--echhHhc----ccCCCCEEEEcCCC
Confidence            466789999995 899999999999999999999887654433322222111  2222221    14578999999863

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.75  E-value=0.0042  Score=54.46  Aligned_cols=37  Identities=27%  Similarity=0.344  Sum_probs=33.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP  120 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~  120 (269)
                      .++|.|+|+ |.+|..++..|+..|++|++.+++++..
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~   41 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELA   41 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            358999995 9999999999999999999999987654

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.75  E-value=0.016  Score=51.12  Aligned_cols=79  Identities=16%  Similarity=0.194  Sum_probs=51.1

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCCcc
Q 024290           85 SILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~  163 (269)
                      +|.|.|++|+.|..|++.|.... .++..+.-+..               .+   +.+..++++++|++|.+.+.     
T Consensus         3 ~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~---------------~~---~~~~~~~~~~~D~vFlalp~-----   59 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR---------------KD---AAERAKLLNAADVAILCLPD-----   59 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc---------------cC---cCCHhHhhcCCCEEEECCCH-----
Confidence            79999999999999999999875 56666654321               01   12234555778999988751     


Q ss_pred             chhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          164 IKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       164 ~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                            .....++..+.+.|+ ++|=.|+.
T Consensus        60 ------~~s~~~~~~~~~~g~-~VIDlSad   82 (310)
T TIGR01851        60 ------DAAREAVSLVDNPNT-CIIDASTA   82 (310)
T ss_pred             ------HHHHHHHHHHHhCCC-EEEECChH
Confidence                  122345555555554 56666653

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.74  E-value=0.032  Score=51.98  Aligned_cols=117  Identities=14%  Similarity=0.061  Sum_probs=70.0

Q ss_pred             EECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCCccchhh
Q 024290           88 VVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKV  167 (269)
Q Consensus        88 VtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~  167 (269)
                      |+||+|.+|.++++.|...|++|++..+...+.. .....++..+..|.+..+...++.                   ..
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~l~-------------------~~  102 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA-AGWGDRFGALVFDATGITDPADLK-------------------AL  102 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccccccc-cCcCCcccEEEEECCCCCCHHHHH-------------------HH
Confidence            7788899999999999999999998766543211 111123333334444433332211                   00


Q ss_pred             cHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHh------cCCCEEEEEcCc
Q 024290          168 DWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQD------SGLPHVIIRLWP  228 (269)
Q Consensus       168 n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~------~gi~~~ilrp~~  228 (269)
                       .......++.+.  ..++||++++..... ....|+.+|.+++.+++.      .++.++.+.|+.
T Consensus       103 -~~~~~~~l~~l~--~~griv~i~s~~~~~-~~~~~~~akaal~gl~rsla~E~~~gi~v~~i~~~~  165 (450)
T PRK08261        103 -YEFFHPVLRSLA--PCGRVVVLGRPPEAA-ADPAAAAAQRALEGFTRSLGKELRRGATAQLVYVAP  165 (450)
T ss_pred             -HHHHHHHHHhcc--CCCEEEEEccccccC-CchHHHHHHHHHHHHHHHHHHHhhcCCEEEEEecCC
Confidence             111122222222  235999999876532 334689999999887653      578888888865

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.74  E-value=0.0021  Score=58.76  Aligned_cols=72  Identities=19%  Similarity=0.401  Sum_probs=59.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      +.+++++|+|+ |-+|.-++++|.++| .+|+++.|+.++..++..+.+     +++...+++...+..+|+||.+.+.
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-----~~~~~l~el~~~l~~~DvVissTsa  248 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-----AEAVALEELLEALAEADVVISSTSA  248 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-----CeeecHHHHHHhhhhCCEEEEecCC
Confidence            78899999995 999999999999999 689999998777666555555     3444566788888899999999874

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.73  E-value=0.0097  Score=51.41  Aligned_cols=67  Identities=15%  Similarity=0.202  Sum_probs=46.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G---~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |++|.|+| .|.+|..++..|.+.|   ++|.+.+|+++.........++..       ..+..++++.+|+||.+.-
T Consensus         2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~-------~~~~~~~~~~advVil~v~   71 (267)
T PRK11880          2 MKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA-------ATDNQEAAQEADVVVLAVK   71 (267)
T ss_pred             CCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee-------cCChHHHHhcCCEEEEEcC
Confidence            56899999 5999999999999998   789999997654433222223321       1233445667899988764

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.73  E-value=0.016  Score=54.00  Aligned_cols=76  Identities=16%  Similarity=0.127  Sum_probs=53.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-cccccc--CCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFLRD--WGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~~~~--~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      +.+++|+|+|. |.+|.++++.|.++|++|++.+..+... ...++.  .++.+..++..     ...+.+.|.||...|
T Consensus         3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~-----~~~~~~~d~vv~spg   76 (445)
T PRK04308          3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLK-----DALDNGFDILALSPG   76 (445)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCC-----HHHHhCCCEEEECCC
Confidence            55789999996 6899999999999999999998754321 112322  35666554422     123457899999999


Q ss_pred             CCCCc
Q 024290          158 GRPEE  162 (269)
Q Consensus       158 ~~~~~  162 (269)
                      ..+..
T Consensus        77 i~~~~   81 (445)
T PRK04308         77 ISERQ   81 (445)
T ss_pred             CCCCC
Confidence            76543

>PLN02928 oxidoreductase family protein

Probab=96.71  E-value=0.0077  Score=54.29  Aligned_cols=77  Identities=16%  Similarity=0.208  Sum_probs=53.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc-c--ccCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF-L--RDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-~--~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      .+.+|++.|+| .|.||+.+++.|..-|.+|++.+|+....... +  ....+..+........++.+++...|+|+.+.
T Consensus       156 ~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l  234 (347)
T PLN02928        156 TLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC  234 (347)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence            57889999999 69999999999999999999998863221110 0  00000111111124568899999999999887


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      .
T Consensus       235 P  235 (347)
T PLN02928        235 T  235 (347)
T ss_pred             C
Confidence            6

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.71  E-value=0.0084  Score=47.84  Aligned_cols=38  Identities=18%  Similarity=0.328  Sum_probs=31.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      ++.+|+++|+|.+..+|+-++..|.++|..|+......
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T   70 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT   70 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC
Confidence            58899999999999999999999999999999887754

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.71  E-value=0.0095  Score=46.49  Aligned_cols=57  Identities=16%  Similarity=0.203  Sum_probs=46.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .++.+|+|+|.|.+.-+|..++..|.++|..|+...++..                      ++++.++.+|+||...|
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~----------------------~l~~~v~~ADIVvsAtg   80 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI----------------------QLQSKVHDADVVVVGSP   80 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc----------------------CHHHHHhhCCEEEEecC
Confidence            3588999999999999999999999999999999876432                      34455666777777766

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.70  E-value=0.0063  Score=56.81  Aligned_cols=74  Identities=20%  Similarity=0.266  Sum_probs=52.8

Q ss_pred             CCCCCEEEEECC----------------CcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHH
Q 024290           80 PVRPTSILVVGA----------------TGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP  143 (269)
Q Consensus        80 ~~~~~~vlVtGa----------------tG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~  143 (269)
                      ++.+|+||||+|                ||..|.+|++.+..+|++|+++.-... ..   ...+++++.+  ...+++.
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~---~p~~v~~i~V--~ta~eM~  326 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA---DPQGVKVIHV--ESARQML  326 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC---CCCCceEEEe--cCHHHHH
Confidence            588999999964                699999999999999999999975322 11   1235666644  3444444


Q ss_pred             HHhc---CccEEEEcCCCC
Q 024290          144 ATLV---GVHTVIDCATGR  159 (269)
Q Consensus       144 ~~~~---~~d~vi~~ag~~  159 (269)
                      +++.   ..|++|++|+..
T Consensus       327 ~av~~~~~~Di~I~aAAVa  345 (475)
T PRK13982        327 AAVEAALPADIAIFAAAVA  345 (475)
T ss_pred             HHHHhhCCCCEEEEecccc
Confidence            4442   379999999853

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.70  E-value=0.012  Score=51.91  Aligned_cols=97  Identities=19%  Similarity=0.219  Sum_probs=61.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~a  156 (269)
                      .+.+++|.|++|.+|..+++.+...|.+|+++++++++.. .+...++..+ .|..+. .+.+.+     +++|.++++.
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~~g~~~v-~~~~~~-~~~~~~~~~~~~~vd~v~~~~  215 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE-FLKSLGCDRP-INYKTE-DLGEVLKKEYPKGVDVVYESV  215 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH-HHHHcCCceE-EeCCCc-cHHHHHHHhcCCCCeEEEECC
Confidence            4678999999999999999999999999999988654432 2333444222 233222 222222     3689999988


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      |.           ......++.+...  +++|.++...
T Consensus       216 g~-----------~~~~~~~~~l~~~--g~~v~~g~~~  240 (329)
T cd08250         216 GG-----------EMFDTCVDNLALK--GRLIVIGFIS  240 (329)
T ss_pred             cH-----------HHHHHHHHHhccC--CeEEEEeccc
Confidence            72           1223344444433  4888887543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.69  E-value=0.0082  Score=52.99  Aligned_cols=98  Identities=13%  Similarity=0.134  Sum_probs=60.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCc---HHHHh-cCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPET---IPATL-VGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~---l~~~~-~~~d~vi~~ag  157 (269)
                      .+.+|+|.|++|.+|..+++.+...|.+|+++++++++........++.. ..|..+.+.   +.+.. +++|+++++.|
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~v~~~~~~~~d~vi~~~g  223 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDA-AINYKTPDLAEALKEAAPDGIDVYFDNVG  223 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCce-EEecCChhHHHHHHHhccCCceEEEEcch
Confidence            45789999999999999999999999999999886544322211134321 123333222   22222 36899999987


Q ss_pred             CCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       158 ~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      ..           .....++.++..  ++||.++..
T Consensus       224 ~~-----------~~~~~~~~l~~~--G~~v~~g~~  246 (329)
T cd05288         224 GE-----------ILDAALTLLNKG--GRIALCGAI  246 (329)
T ss_pred             HH-----------HHHHHHHhcCCC--ceEEEEeec
Confidence            21           122334444333  478877654

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.69  E-value=0.01  Score=50.44  Aligned_cols=99  Identities=20%  Similarity=0.198  Sum_probs=62.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH----hcCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT----LVGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~----~~~~d~vi~~ag  157 (269)
                      .+.+|+|+|+++ +|..+++.+...|.+|+++++++++.. .+...+... ..|..+.+....+    -+++|+++++++
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~~  210 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLE-LAKELGADH-VIDYKEEDLEEELRLTGGGGADVVIDAVG  210 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHH-HHHHhCCce-eccCCcCCHHHHHHHhcCCCCCEEEECCC
Confidence            467899999988 999999999999999999988754322 223333222 2344443333332    246899999987


Q ss_pred             CCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC
Q 024290          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC  195 (269)
Q Consensus       158 ~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~  195 (269)
                      ..          .....+++.++..  ++++.++....
T Consensus       211 ~~----------~~~~~~~~~l~~~--G~~v~~~~~~~  236 (271)
T cd05188         211 GP----------ETLAQALRLLRPG--GRIVVVGGTSG  236 (271)
T ss_pred             CH----------HHHHHHHHhcccC--CEEEEEccCCC
Confidence            32          1223345555433  47888876543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.68  E-value=0.026  Score=50.73  Aligned_cols=68  Identities=24%  Similarity=0.328  Sum_probs=41.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHH-CCCe---EEEEeCCCCCCccc-cccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALD-EGYD---VRCLVRPRPAPADF-LRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~-~G~~---V~~~~R~~~~~~~~-~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .++|.|.||||++|+.+++.|.+ ..++   +..+.......... +....+.+...|   ++    .+.++|+||.+++
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~~---~~----~~~~~Divf~a~~   77 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEAK---IN----SFEGVDIAFFSAG   77 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeCC---HH----HhcCCCEEEECCC
Confidence            35899999999999999999995 5666   55555433222211 111122222222   22    2357899988876

>PRK14851 hypothetical protein; Provisional

Probab=96.66  E-value=0.016  Score=56.59  Aligned_cols=100  Identities=18%  Similarity=0.181  Sum_probs=65.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCC---CCcc-c------------------c----ccCCCEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRP---APAD-F------------------L----RDWGATVVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~---~~~~-~------------------~----~~~~~~~i~  133 (269)
                      +...+|+|.| .|++|+.+++.|+..|. ++++++.+.-   ++.. .                  +    ...+++.+.
T Consensus        41 L~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~  119 (679)
T PRK14851         41 LAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFP  119 (679)
T ss_pred             HhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence            6678999999 69999999999999995 6777765421   1110 0                  0    011355666


Q ss_pred             cCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      ..++ .+.+.++++++|+||.+.-..        .+..-..+.+.|.+.++ .+|+.+
T Consensus       120 ~~i~-~~n~~~~l~~~DvVid~~D~~--------~~~~r~~l~~~c~~~~i-P~i~~g  167 (679)
T PRK14851        120 AGIN-ADNMDAFLDGVDVVLDGLDFF--------QFEIRRTLFNMAREKGI-PVITAG  167 (679)
T ss_pred             cCCC-hHHHHHHHhCCCEEEECCCCC--------cHHHHHHHHHHHHHCCC-CEEEee
Confidence            6665 456788899999999876311        12233457778888876 455544

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=96.64  E-value=0.069  Score=49.87  Aligned_cols=116  Identities=14%  Similarity=0.170  Sum_probs=74.6

Q ss_pred             CCCCEEEEECCC---cHHHHHHHHHHHHCCC--eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           81 VRPTSILVVGAT---GTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        81 ~~~~~vlVtGat---G~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      +..++|.|+|++   |.+|..+.+.|.+.||  +|+.+.-+....             ..+.-..++.++-+.+|.++.+
T Consensus         5 ~~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i-------------~G~~~~~sl~~lp~~~Dlavi~   71 (447)
T TIGR02717         5 FNPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEI-------------LGVKAYPSVLEIPDPVDLAVIV   71 (447)
T ss_pred             cCCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCcc-------------CCccccCCHHHCCCCCCEEEEe
Confidence            567889999998   6789999999999998  576654432211             1122234444444578988876


Q ss_pred             CCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       156 ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                      ..           ......+++.|.+.|++.+|.+++...+.....  ......+.++.++.|++++
T Consensus        72 vp-----------~~~~~~~l~e~~~~gv~~~vi~s~gf~e~g~~g--~~~~~~l~~~a~~~girvl  125 (447)
T TIGR02717        72 VP-----------AKYVPQVVEECGEKGVKGAVVITAGFKEVGEEG--AELEQELVEIARKYGMRLL  125 (447)
T ss_pred             cC-----------HHHHHHHHHHHHhcCCCEEEEECCCccccCcch--HHHHHHHHHHHHHcCCEEE
Confidence            54           344567888888999999998887544322111  1112344455677777654

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.64  E-value=0.0046  Score=53.96  Aligned_cols=74  Identities=22%  Similarity=0.278  Sum_probs=51.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHH---Hh--cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA---TL--VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~---~~--~~~d~vi~~a  156 (269)
                      .+++++|+|++|.+|..+++.+...|.+|++++++.++... +.+.++..+ .|..+.+....   ..  +++|.+++++
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~-~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~  221 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAEL-VRQAGADAV-FNYRAEDLADRILAATAGQGVDVIIEVL  221 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHcCCCEE-EeCCCcCHHHHHHHHcCCCceEEEEECC
Confidence            46899999999999999999999999999999887544322 233344322 34444433332   22  3689999998


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      +
T Consensus       222 ~  222 (325)
T cd08253         222 A  222 (325)
T ss_pred             c
Confidence            7

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.63  E-value=0.0062  Score=54.42  Aligned_cols=67  Identities=24%  Similarity=0.325  Sum_probs=55.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      +++|.|+|| |.+|+-++..-..-|++|++++-+++.......   -..+..+.+|++.+.++.+.+|+|=
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va---~~~i~~~~dD~~al~ela~~~DViT   67 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQVA---DRVIVAAYDDPEALRELAAKCDVIT   67 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc---cceeecCCCCHHHHHHHHhhCCEEE
Confidence            468999995 999999999999999999999977665544222   2567788889999999999999884

>PLN02712 arogenate dehydrogenase

Probab=96.63  E-value=0.015  Score=56.92  Aligned_cols=67  Identities=15%  Similarity=0.250  Sum_probs=46.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-cCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-VGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-~~~d~vi~~ag  157 (269)
                      -..++|.|+| .|.+|..+++.|.+.|++|++.+|+...  +...+.++..    .   .+..+++ .++|+||.+..
T Consensus        50 ~~~~kIgIIG-~G~mG~slA~~L~~~G~~V~~~dr~~~~--~~A~~~Gv~~----~---~d~~e~~~~~aDvViLavP  117 (667)
T PLN02712         50 TTQLKIAIIG-FGNYGQFLAKTLISQGHTVLAHSRSDHS--LAARSLGVSF----F---LDPHDLCERHPDVILLCTS  117 (667)
T ss_pred             CCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHcCCEE----e---CCHHHHhhcCCCEEEEcCC
Confidence            3457899999 6999999999999999999999987332  2222334332    1   2233433 45899988864

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.62  E-value=0.0053  Score=53.90  Aligned_cols=77  Identities=16%  Similarity=0.302  Sum_probs=50.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCC---CCccccccC----CCEEEEcCCCCCCcHHHHhcCccE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRP---APADFLRDW----GATVVNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~---~~~~~~~~~----~~~~i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      ...+++++|.|+ |+.+++++-.|...|. +|+++.|+.+   +..++.+..    +......++.+.+.+.+.+.+.|+
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDi  199 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI  199 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCE
Confidence            356789999996 7779999999999995 8999999753   322222111    111112233222334556678999


Q ss_pred             EEEcCC
Q 024290          152 VIDCAT  157 (269)
Q Consensus       152 vi~~ag  157 (269)
                      |||+..
T Consensus       200 vINaTp  205 (288)
T PRK12749        200 LTNGTK  205 (288)
T ss_pred             EEECCC
Confidence            999875

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.62  E-value=0.0078  Score=52.85  Aligned_cols=37  Identities=16%  Similarity=0.274  Sum_probs=34.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEe-CC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLV-RP  116 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~-R~  116 (269)
                      ++.+|+|+|.|-++.+|+.++..|+++|+.|++.. |+
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT  192 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRT  192 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCC
Confidence            58899999999999999999999999999999984 54

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.61  E-value=0.0038  Score=54.73  Aligned_cols=73  Identities=22%  Similarity=0.297  Sum_probs=49.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc------CCCE---EE-------EcCCCCCCcHHHHhc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD------WGAT---VV-------NADLSKPETIPATLV  147 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~------~~~~---~i-------~~Dl~d~~~l~~~~~  147 (269)
                      ++|.|+|+ |.+|..++..|++.|++|++.+++++...+..+.      .+++   ..       ...+.-.+++.++++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~   80 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA   80 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence            57999995 9999999999999999999999986654332110      0000   00       001111245667788


Q ss_pred             CccEEEEcCC
Q 024290          148 GVHTVIDCAT  157 (269)
Q Consensus       148 ~~d~vi~~ag  157 (269)
                      ++|+||-+..
T Consensus        81 ~aD~Vi~avp   90 (288)
T PRK09260         81 DADLVIEAVP   90 (288)
T ss_pred             CCCEEEEecc
Confidence            9999999876

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.60  E-value=0.007  Score=55.32  Aligned_cols=71  Identities=20%  Similarity=0.282  Sum_probs=53.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~a  156 (269)
                      ..|+|+|+|+ |.+|..++..+.+.|++|++++.++........   -.++..|..|.+.+.++++  ++|+|+...
T Consensus        11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a---d~~~~~~~~d~~~l~~~~~~~~id~vi~~~   83 (395)
T PRK09288         11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA---HRSHVIDMLDGDALRAVIEREKPDYIVPEI   83 (395)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh---hheEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence            3568999995 789999999999999999999987654322111   1356778888888888776  789988643

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.60  E-value=0.0085  Score=54.86  Aligned_cols=74  Identities=14%  Similarity=-0.015  Sum_probs=45.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc------CCCEE----EEcCCCCCCcHHHHhcCccEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD------WGATV----VNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~------~~~~~----i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      |+|.|+| .|++|..++..|+ .|++|+++++++++...+.+.      .++.-    ..+.++...+...+..++|+||
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vi   78 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVI   78 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEE
Confidence            3689998 7999999996665 599999999987654332210      00000    0111211222344557899999


Q ss_pred             EcCCCC
Q 024290          154 DCATGR  159 (269)
Q Consensus       154 ~~ag~~  159 (269)
                      -+.+..
T Consensus        79 i~Vpt~   84 (388)
T PRK15057         79 IATPTD   84 (388)
T ss_pred             EeCCCC
Confidence            988743

>PRK07574 formate dehydrogenase; Provisional

Probab=96.59  E-value=0.015  Score=53.03  Aligned_cols=69  Identities=16%  Similarity=0.216  Sum_probs=51.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+|+|.|+| .|.||+.+++.|..-|.+|++.+|..... +.....+       +.-..+++++++.+|+|+.+..
T Consensus       189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~-~~~~~~g-------~~~~~~l~ell~~aDvV~l~lP  257 (385)
T PRK07574        189 DLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPE-EVEQELG-------LTYHVSFDSLVSVCDVVTIHCP  257 (385)
T ss_pred             ecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCch-hhHhhcC-------ceecCCHHHHhhcCCEEEEcCC
Confidence            47889999999 69999999999999999999999864221 1111112       2223468888899999988775

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.59  E-value=0.018  Score=53.76  Aligned_cols=76  Identities=20%  Similarity=0.106  Sum_probs=55.2

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc----cccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~----~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      +|+|.| .|..|...++.|.++|++|.+.++++....    ..+...++++..+.-.+.+.+...+.+.|.||...|..+
T Consensus         2 ~v~viG-~G~sG~s~a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~gi~~   80 (459)
T PRK02705          2 IAHVIG-LGRSGIAAARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSPGIPW   80 (459)
T ss_pred             eEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECCCCCC
Confidence            589999 588999999999999999999998654322    124455777766553344444456678999999888654


Q ss_pred             C
Q 024290          161 E  161 (269)
Q Consensus       161 ~  161 (269)
                      .
T Consensus        81 ~   81 (459)
T PRK02705         81 D   81 (459)
T ss_pred             C
Confidence            3

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.58  E-value=0.071  Score=48.42  Aligned_cols=57  Identities=19%  Similarity=0.183  Sum_probs=44.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ..++|.|+|.+|.||..+++.|.+. |++|++.++..+                   ......+.+.++|+||.|..
T Consensus         3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~-------------------~~~~~~~~v~~aDlVilavP   60 (370)
T PRK08818          3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADP-------------------GSLDPATLLQRADVLIFSAP   60 (370)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCcc-------------------ccCCHHHHhcCCCEEEEeCC
Confidence            3468999999999999999999975 889998887411                   01234566788999999875

>PRK07411 hypothetical protein; Validated

Probab=96.57  E-value=0.023  Score=52.14  Aligned_cols=97  Identities=15%  Similarity=0.218  Sum_probs=62.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCC---Ccc-c------------------ccc----CCCEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPA---PAD-F------------------LRD----WGATVVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~---~~~-~------------------~~~----~~~~~i~  133 (269)
                      +...+|+|+| .|++|..+++.|+..|. ++++++.+.-.   +.. .                  +.+    ..++.+.
T Consensus        36 L~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~  114 (390)
T PRK07411         36 LKAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE  114 (390)
T ss_pred             HhcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence            5677899999 59999999999999995 67777764211   100 0                  000    1244444


Q ss_pred             cCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                      ..++. +...+++.++|+||.|..          |+..-..+-++|.+.++ .+|+.
T Consensus       115 ~~~~~-~~~~~~~~~~D~Vvd~~d----------~~~~r~~ln~~~~~~~~-p~v~~  159 (390)
T PRK07411        115 TRLSS-ENALDILAPYDVVVDGTD----------NFPTRYLVNDACVLLNK-PNVYG  159 (390)
T ss_pred             cccCH-HhHHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEE
Confidence            44543 456677889999999875          33333445577777764 44443

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=96.56  E-value=0.11  Score=45.44  Aligned_cols=111  Identities=14%  Similarity=0.082  Sum_probs=71.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcC--ccEEEEcCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG--VHTVIDCATGRP  160 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~--~d~vi~~ag~~~  160 (269)
                      ..+|+|.|.||.+|+.+.+.|+..|++++. .-++.+..+.         ...+.-..++.++-+.  +|.++.+..   
T Consensus         6 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~v~-~V~p~~~~~~---------v~G~~~y~sv~dlp~~~~~Dlavi~vp---   72 (286)
T TIGR01019         6 DTKVIVQGITGSQGSFHTEQMLAYGTNIVG-GVTPGKGGTT---------VLGLPVFDSVKEAVEETGANASVIFVP---   72 (286)
T ss_pred             CCcEEEecCCcHHHHHHHHHHHhCCCCEEE-EECCCCCcce---------ecCeeccCCHHHHhhccCCCEEEEecC---
Confidence            457999999999999999999999988444 4444321111         1123334555555554  799888765   


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                              -.....+++.|.+.|++.+|.+|+...+.        -...+.+..++.|+++.
T Consensus        73 --------a~~v~~~l~e~~~~Gvk~avIis~Gf~e~--------~~~~l~~~a~~~giril  118 (286)
T TIGR01019        73 --------APFAADAIFEAIDAGIELIVCITEGIPVH--------DMLKVKRYMEESGTRLI  118 (286)
T ss_pred             --------HHHHHHHHHHHHHCCCCEEEEECCCCCHH--------HHHHHHHHHHHcCCEEE
Confidence                    23445677788889999888888753211        11334455666666553

ATP citrate lyases appear to form an outgroup.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.56  E-value=0.0041  Score=57.65  Aligned_cols=145  Identities=10%  Similarity=0.037  Sum_probs=83.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHC---C----CeEEEEeCC--CCCCccc---ccc-----C-CCEEEEcCCCCCCcHHH
Q 024290           83 PTSILVVGATGTLGRQIVRRALDE---G----YDVRCLVRP--RPAPADF---LRD-----W-GATVVNADLSKPETIPA  144 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~---G----~~V~~~~R~--~~~~~~~---~~~-----~-~~~~i~~Dl~d~~~l~~  144 (269)
                      .-+|+||||+|.||.+|+-.++.-   |    ..+++++..  .+.....   +.+     . ++.+. .      ...+
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~------~~~e  195 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T------DLDV  195 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E------CCHH
Confidence            357999999999999999988762   3    345666663  2211100   011     0 12222 1      2256


Q ss_pred             HhcCccEEEEcCCCC-----CCccchhhcHHHHHHHHHHHHHcCC--CeEEEecccCC------------CCCCCCcHHH
Q 024290          145 TLVGVHTVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGI--QKYVFYSIHNC------------DKHPEVPLME  205 (269)
Q Consensus       145 ~~~~~d~vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v--~r~V~~SS~~~------------~~~~~~~y~~  205 (269)
                      .++++|+||.++|..     ...+..+.|..-.+.+.++..+...  .+++.+.|--+            ..++..-.+.
T Consensus       196 a~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~~k~apgiP~~rVig~  275 (452)
T cd05295         196 AFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSILIKYAPSIPRKNIIAV  275 (452)
T ss_pred             HhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEe
Confidence            788999999999942     2335566777778888888877765  56666664211            1111111111


Q ss_pred             ----HHHHHHHHHHhcCCCEEEEEcCcccccCc
Q 024290          206 ----IKYCTEQFLQDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       206 ----sK~~~e~~~~~~gi~~~ilrp~~i~g~~~  234 (269)
                          +-++.-.+.+..+++..-|+-.+|+|+..
T Consensus       276 gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG  308 (452)
T cd05295         276 ARLQENRAKALLARKLNVNSAGIKDVIVWGNIG  308 (452)
T ss_pred             cchHHHHHHHHHHHHhCcCHHHceeeEEEEccC
Confidence                11111223355778877777777888743

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.56  E-value=0.008  Score=56.85  Aligned_cols=73  Identities=16%  Similarity=0.209  Sum_probs=49.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cC----CCEE-EEcCCCCCCcHHHHhcCccE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DW----GATV-VNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~----~~~~-i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      ++|.|+| +|.+|..++..|+..|++|++.+++++.......       ..    .... ..+.+.-.+++.++++++|+
T Consensus         5 ~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~   83 (495)
T PRK07531          5 MKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW   83 (495)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence            5799998 6999999999999999999999998655332100       00    0000 00112223456677889999


Q ss_pred             EEEcCC
Q 024290          152 VIDCAT  157 (269)
Q Consensus       152 vi~~ag  157 (269)
                      ||-+..
T Consensus        84 Vieavp   89 (495)
T PRK07531         84 IQESVP   89 (495)
T ss_pred             EEEcCc
Confidence            998875

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.56  E-value=0.0028  Score=55.34  Aligned_cols=101  Identities=21%  Similarity=0.324  Sum_probs=62.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccC---CCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDW---GATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~---~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      ...+++++|.|| |+.+++++..|++.| .+|+++.|+.++..++.+..   +......++.+.+...    ..|+|||+
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~----~~dliINa  197 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE----EADLLINA  197 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc----ccCEEEEC
Confidence            345789999995 999999999999999 58999999877654433222   2211122232222222    58999999


Q ss_pred             CCC--CCC--c------------cchhhcHHH-HHHHHHHHHHcCCC
Q 024290          156 ATG--RPE--E------------PIKKVDWEG-KVALIQCAKAMGIQ  185 (269)
Q Consensus       156 ag~--~~~--~------------~~~~~n~~~-~~~li~a~~~~~v~  185 (269)
                      ...  ...  .            ..+|+.... ...+++.|++.|.+
T Consensus       198 Tp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~  244 (283)
T COG0169         198 TPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK  244 (283)
T ss_pred             CCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence            762  111  1            111222221 23588888888864

>PRK14852 hypothetical protein; Provisional

Probab=96.55  E-value=0.02  Score=57.62  Aligned_cols=101  Identities=15%  Similarity=0.066  Sum_probs=65.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCC---Ccc-------------------ccc----cCCCEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPA---PAD-------------------FLR----DWGATVVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~---~~~-------------------~~~----~~~~~~i~  133 (269)
                      +...+|+|.| .|++|..+++.|+..|. ++++++-+.-+   +..                   .+.    ..+++.+.
T Consensus       330 L~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~  408 (989)
T PRK14852        330 LLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP  408 (989)
T ss_pred             HhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence            5678999999 69999999999999995 67777654211   110                   000    11344454


Q ss_pred             cCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      ..+ +.+.+.++++++|+||.+.-..        .......+.+.|.+.++ .+|+.++
T Consensus       409 ~~I-~~en~~~fl~~~DiVVDa~D~~--------~~~~rr~l~~~c~~~~I-P~I~ag~  457 (989)
T PRK14852        409 EGV-AAETIDAFLKDVDLLVDGIDFF--------ALDIRRRLFNRALELGI-PVITAGP  457 (989)
T ss_pred             cCC-CHHHHHHHhhCCCEEEECCCCc--------cHHHHHHHHHHHHHcCC-CEEEeec
Confidence            555 4467888899999999876411        12233457777888876 5665554

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.55  E-value=0.0038  Score=55.42  Aligned_cols=74  Identities=18%  Similarity=0.261  Sum_probs=47.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC-CCEE-----EEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATV-----VNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~-~~~~-----i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      ||+|.|+| .|.+|..++..|++.|++|.+++|+++......... ....     ....+....+..+.++++|+||-+.
T Consensus         1 mmkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v   79 (325)
T PRK00094          1 MMKIAVLG-AGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAV   79 (325)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeC
Confidence            36899999 599999999999999999999999754332211110 0000     0001111234555667889998887


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      .
T Consensus        80 ~   80 (325)
T PRK00094         80 P   80 (325)
T ss_pred             C
Confidence            5

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.55  E-value=0.014  Score=55.10  Aligned_cols=75  Identities=17%  Similarity=0.177  Sum_probs=53.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      ..+++|+|.| .|..|...++.|.+.|++|++.++++.... .+++.++.++.++-     ....+.++|+||...|..+
T Consensus        10 ~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~-~l~~~g~~~~~~~~-----~~~~l~~~D~VV~SpGi~~   82 (488)
T PRK03369         10 LPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALR-PHAERGVATVSTSD-----AVQQIADYALVVTSPGFRP   82 (488)
T ss_pred             cCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHhCCCEEEcCcc-----hHhHhhcCCEEEECCCCCC
Confidence            4568999999 589999999999999999999987644322 23445666654332     1233467899999999654


Q ss_pred             Cc
Q 024290          161 EE  162 (269)
Q Consensus       161 ~~  162 (269)
                      ..
T Consensus        83 ~~   84 (488)
T PRK03369         83 TA   84 (488)
T ss_pred             CC
Confidence            43

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.55  E-value=0.0094  Score=55.50  Aligned_cols=68  Identities=15%  Similarity=0.127  Sum_probs=50.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+|+|+|+| .|.||+.+++.|...|.+|++..+++....+.. ..++++.        .+.++++.+|+||.+.|
T Consensus       251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~~--------~leell~~ADIVI~atG  318 (476)
T PTZ00075        251 MIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQVV--------TLEDVVETADIFVTATG  318 (476)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCceec--------cHHHHHhcCCEEEECCC
Confidence            57899999999 589999999999999999999988754432211 1233322        35667788999998876

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.53  E-value=0.04  Score=41.64  Aligned_cols=71  Identities=21%  Similarity=0.247  Sum_probs=42.6

Q ss_pred             EEEEECCCcHHHHHHHHHHHH-CCCeEEEE-eCCCCCCcccccc-CCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           85 SILVVGATGTLGRQIVRRALD-EGYDVRCL-VRPRPAPADFLRD-WGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~-~G~~V~~~-~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ++.|+|++|.+|..+++.|.+ .++++.++ +++.+........ ..+..+..+..+.+.+.  ..++|+||.+.+
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~DvV~~~~~   74 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFE--ELAVDIVFLALP   74 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChh--hcCCCEEEEcCC
Confidence            478999999999999999998 47888888 4432222111111 11211111122223333  247899999886

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.52  E-value=0.0065  Score=55.36  Aligned_cols=108  Identities=10%  Similarity=0.047  Sum_probs=64.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-e----EEE--E--eCCCCCCcccc---ccCCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-D----VRC--L--VRPRPAPADFL---RDWGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-~----V~~--~--~R~~~~~~~~~---~~~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      .-||.|+|++|.+|.+++-.|+..|. +    |.+  +  +++.+......   .+.-..+. .++.-...-.+.++++|
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~-~~v~i~~~~y~~~kdaD  122 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLL-REVSIGIDPYEVFEDAD  122 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhc-CceEEecCCHHHhCCCC
Confidence            35899999999999999999998873 3    333  3  55544322111   11000000 01100011145678999


Q ss_pred             EEEEcCCCC-----CCccchhhcHHHHHHHHHHHHHcC-CC-eEEEec
Q 024290          151 TVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMG-IQ-KYVFYS  191 (269)
Q Consensus       151 ~vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~-v~-r~V~~S  191 (269)
                      +||.+||..     ...+....|..-.+.+.+.+++.. .. ++|.+|
T Consensus       123 IVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       123 WALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence            999999942     223455677888888888888843 33 455555

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.52  E-value=0.028  Score=48.10  Aligned_cols=35  Identities=29%  Similarity=0.592  Sum_probs=28.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CeEEE-EeCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRC-LVRPR  117 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~-~~R~~  117 (269)
                      ++||.|.|++|..|+.+++.+.+.+ .++.+ ++|.+
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~   38 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG   38 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence            5789999999999999999999875 56554 45543

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.52  E-value=0.0091  Score=53.46  Aligned_cols=65  Identities=14%  Similarity=0.247  Sum_probs=50.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+|+|.|+| .|.||+.+++.|...|++|++.+|++.....        .    +.-.+++.+++++.|+|+.+..
T Consensus       143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~--------~----~~~~~~l~ell~~aDiVil~lP  207 (330)
T PRK12480        143 PVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLD--------F----LTYKDSVKEAIKDADIISLHVP  207 (330)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhh--------h----hhccCCHHHHHhcCCEEEEeCC
Confidence            57889999999 6999999999999999999999987542111        0    1113467888999999988775

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.51  E-value=0.0076  Score=54.05  Aligned_cols=68  Identities=24%  Similarity=0.283  Sum_probs=51.0

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ..+.+|+|.|+| .|.||+.+++.|...|.+|++.+|......  ....++        ...++.++++..|+|+.+..
T Consensus       146 ~~L~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~~~~--------~~~~l~ell~~aDiV~l~lP  213 (333)
T PRK13243        146 YDVYGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEA--EKELGA--------EYRPLEELLRESDFVSLHVP  213 (333)
T ss_pred             cCCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhh--HHHcCC--------EecCHHHHHhhCCEEEEeCC
Confidence            357899999999 599999999999999999999988643211  111111        12357788889999988875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	269
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		2e-07
1xq6_A	253	X-ray Structure Of Gene Product From Arabidopsis Th		6e-06
2zcu_A	286	Crystal Structure Of A New Type Of Nadph-Dependent		3e-05
1qyc_A	308	Crystal Structures Of Pinoresinol-Lariciresinol And		1e-04
2vrb_A	287	Crystal Structure Of The Citrobacter Sp. Triphenylm		2e-04
2jl1_A	287	Structural Insight Into Bioremediation Of Triphenyl		2e-04
2a35_A	215	1.5 A Crystal Structure Of A Protein Of Unknown Fun		4e-04
2gas_A	307	Crystal Structure Of Isoflavone Reductase Length =		4e-04

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 15/119 (12%)
Query: 88  VVGATGTLGRQIVRRALDEGYDVRCLVRPRPA---PADFLRDW-GAT----VVNADLSKP 139
           V G TG LG  I++  L+ GY V   +R  P       FL +  GA+      NADLS P
Sbjct: 6   VTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNP 65
Query: 140 ETIPATLVG----VHTV--IDCATGRPEEPIKKVDWEGKVALIQ-CAKAMGIQKYVFYS 191
           ++  A + G     HT   ID A   PEE + K   +G + +++ C  +  ++++++ S
Sbjct: 66  DSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTS 124

>pdb|1XQ6|A Chain A, X-ray Structure Of Gene Product From Arabidopsis Thaliana At5g02240 Length = 253

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 35/172 (20%)
Query: 85  SILVVGATGTLGRQIVRRALDEGYD---VRCLVRPRPAPADFLRDWGATVVNADLSKPET 141
           ++LV GA+G  G QIV + L EG D    + LVR          +  A V   D++  ++
Sbjct: 6   TVLVTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE--ADVFIGDITDADS 62
Query: 142 IPATLVGVHTVIDCAT--------------GRPE------EPIKKVDWEGKVALIQCAKA 181
           I     G+  ++   +              GRPE      +  ++VDW G+   I  AK 
Sbjct: 63  INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV 122
Query: 182 MGIQKYVFYSIHNCDKHPEVPLMEI--------KYCTEQFLQDSGLPHVIIR 225
            G+ K++         +P+ PL ++        K   EQ+L DSG P+ IIR
Sbjct: 123 AGV-KHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIR 173

>pdb|2ZCU|A Chain A, Crystal Structure Of A New Type Of Nadph-Dependent Quinone Oxidoreductase (Qor2) From Escherichia Coli Length = 286

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 86  ILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP 143
           I + GATG LG  ++   +       +  +VR  PA A  L   G TV  AD      + 
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVR-NPAKAQALAAQGITVRQADYGDEAALT 60
Query: 144 ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPL 203
           + L GV  ++  ++    E  ++      V  I  AKA G++   + S+ + D  P + L
Sbjct: 61  SALQGVEKLLLISS---SEVGQRAPQHRNV--INAAKAAGVKFIAYTSLLHADTSP-LGL 114
Query: 204 MEIKYCTEQFLQDSGLPHVIIR 225
            +    TE+ L DSG+ + ++R
Sbjct: 115 ADEHIETEKMLADSGIVYTLLR 136

>pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 22/153 (14%)
Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-----PADFLRDW---GATVVNADLS 137
           IL++GATG +GR + + +LD G+    LVR   A      A  L  +   GA +V+  + 
Sbjct: 7   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID 66
Query: 138 KPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD- 196
              ++   +  V  VI          +  +  E +V +I+  K +G  K  F S    D 
Sbjct: 67  DHASLVEAVKNVDVVIST--------VGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDV 118
Query: 197 -----KHPEVPLMEIKYCTEQFLQDSGLPHVII 224
                  P   + E+K    + ++  G+P+  +
Sbjct: 119 DNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYV 151

>pdb|2VRB|A Chain A, Crystal Structure Of The Citrobacter Sp. Triphenylmethane Reductase Complexed With Nadp(H) Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 7/147 (4%)
Query: 85  SILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           SI V GATG LG  +++  L +     +  +VR     A  L D G  V + D ++PE++
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR-NVEKASTLADQGVEVRHGDYNQPESL 60
Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
                GV  ++  +    +  +  V       +++ A+  G+ K++ Y+ +   +   +P
Sbjct: 61  QKAFAGVSKLLFISGPHYDNTLLIVQHAN---VVKAARDAGV-KHIAYTGYAFAEESIIP 116
Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLWPY 229
           L  +   TE  ++ + +P+  +R   Y
Sbjct: 117 LAHVHLATEYAIRTTNIPYTFLRNALY 143

>pdb|2JL1|A Chain A, Structural Insight Into Bioremediation Of Triphenylmethane Dyes By Citrobacter Sp. Triphenylmethane Reductase Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 7/147 (4%)
Query: 85  SILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           SI V GATG LG  +++  L +     +  +VR     A  L D G  V + D ++PE++
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR-NVEKASTLADQGVEVRHGDYNQPESL 60
Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
                GV  ++  +    +  +  V       +++ A+  G+ K++ Y+ +   +   +P
Sbjct: 61  QKAFAGVSKLLFISGPHYDNTLLIVQHAN---VVKAARDAGV-KHIAYTGYAFAEESIIP 116
Query: 203 LMEIKYCTEQFLQDSGLPHVIIRLWPY 229
           L  +   TE  ++ + +P+  +R   Y
Sbjct: 117 LAHVHLATEYAIRTTNIPYTFLRNALY 143

>pdb|2A35|A Chain A, 1.5 A Crystal Structure Of A Protein Of Unknown Function Pa4017 From Pseudomonas Aeruginosa Pao1, Possible Epimerase Length = 215

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 10/147 (6%)
Query: 83  PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           P  +L+ GATG  G  ++ R L E    + +   R A A+  R     + N      E +
Sbjct: 5   PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPR-----LDNPVGPLAELL 59
Query: 143 PATLVGVHTVIDC-----ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK 197
           P     + T   C          EE  + VD++  +A+ + A  MG + Y+  S    D 
Sbjct: 60  PQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA 119
Query: 198 HPEVPLMEIKYCTEQFLQDSGLPHVII 224
              +    +K   EQ LQ+ G P + I
Sbjct: 120 KSSIFYNRVKGELEQALQEQGWPQLTI 146

>pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 23/153 (15%)
Query: 84  TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---------DFLRDWGATVVNA 134
             IL++G TG +GR IV  ++  G     LVR     A         D  +  G  ++  
Sbjct: 3   NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEG 62
Query: 135 DLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH- 193
           D++  ET+   +  V  VI CA GR       +  E +V +I+  K  G  K  F S   
Sbjct: 63  DINDHETLVKAIKQVDIVI-CAAGR-------LLIEDQVKIIKAIKEAGNVKKFFPSEFG 114
Query: 194 -NCDKHPEVP----LMEIKYCTEQFLQDSGLPH 221
            + D+H  V     + E K    + ++  G+P+
Sbjct: 115 LDVDRHDAVEPVRQVFEEKASIRRVIEAEGVPY 147

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	269
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-45
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-44
1xq6_A	253	Unknown protein; structural genomics, protein stru	4e-40
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	1e-38
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	3e-38
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	5e-38
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	8e-38
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	5e-37
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	9e-32
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	2e-30
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	1e-29
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	2e-29
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	5e-28
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-25
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	2e-25
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	6e-24
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	8e-24
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	5e-22
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-20
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	4e-19
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	2e-17
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	4e-17
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	8e-14
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	2e-10
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	7e-10
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	8e-10
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-09
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	4e-07
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	3e-06
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	4e-06
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	5e-06
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	1e-05
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	2e-05
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	3e-05
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	4e-05
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	4e-05
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	7e-05
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	1e-04
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-04
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	2e-04
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	3e-04
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	5e-04
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	6e-04

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score =  151 bits (383), Expect = 1e-45
 Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 7/146 (4%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I + GATG  G   + +A+  GY+V  LVR   +         A VV  D+ +   +  T
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLVR-DSSRLPSEGPRPAHVVVGDVLQAADVDKT 64

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS----IHNCDKHPEV 201
           + G   VI     R +     V  EG   ++   KA G+ K V  +    + +  K P  
Sbjct: 65  VAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPR 124

Query: 202 --PLMEIKYCTEQFLQDSGLPHVIIR 225
              + +      + L++SGL +V + 
Sbjct: 125 LQAVTDDHIRMHKVLRESGLKYVAVM 150

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score =  149 bits (379), Expect = 1e-44
 Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 12/149 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGAT-VVNADLSKPETIPA 144
           +LVVGA G + R ++    ++G++   +VR        LR+ GA+ +V A+L   E    
Sbjct: 24  VLVVGANGKVARYLLSELKNKGHEPVAMVR-NEEQGPELRERGASDIVVANL--EEDFSH 80

Query: 145 TLVGVHTVIDCATGRPE---EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEV 201
               +  V+  A   P    +    +D  G +  IQ A+  GI++++  S        + 
Sbjct: 81  AFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQG 140

Query: 202 PL-----MEIKYCTEQFLQDSGLPHVIIR 225
           P+     +  K   +  L+ S L + I+R
Sbjct: 141 PMNMRHYLVAKRLADDELKRSSLDYTIVR 169

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score =  138 bits (349), Expect = 4e-40
 Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 31/171 (18%)

Query: 84  TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRDWGATVVNADLSKPET 141
            ++LV GA+G  G+ + ++  +    +  + LVR             A V   D++  ++
Sbjct: 5   PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADS 62

Query: 142 IPATLVGVHTVIDCATGRPE--------------------EPIKKVDWEGKVALIQCAKA 181
           I     G+  ++   +  P+                    +  ++VDW G+   I  AK 
Sbjct: 63  INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV 122

Query: 182 MGIQKYVFYSIHNCDK-------HPEVPLMEIKYCTEQFLQDSGLPHVIIR 225
            G++  V                     ++  K   EQ+L DSG P+ IIR
Sbjct: 123 AGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIR 173

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score =  136 bits (344), Expect = 1e-38
 Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 22/157 (14%)

Query: 83  PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF--------LRDWGATVVNA 134
            + IL++GATG +GR + + +LD G+    LVR   A ++          +  GA +V+ 
Sbjct: 4   RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHG 63

Query: 135 DLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN 194
            +    ++   +  V  VI             +  E +V +I+  K +G  K  F S   
Sbjct: 64  SIDDHASLVEAVKNVDVVISTVGS--------LQIESQVNIIKAIKEVGTVKRFFPSEFG 115

Query: 195 CDKH------PEVPLMEIKYCTEQFLQDSGLPHVIIR 225
            D        P   + E+K    + ++  G+P+  + 
Sbjct: 116 NDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVS 152

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score =  135 bits (341), Expect = 3e-38
 Identities = 36/158 (22%), Positives = 60/158 (37%), Gaps = 23/158 (14%)

Query: 83  PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP---------RPAPADFLRDWGATVVN 133
              IL++G TG +GR IV  ++  G     LVR          +    D  +  G  ++ 
Sbjct: 2   ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE 61

Query: 134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH 193
            D++  ET+   +  V  VI  A          +  E +V +I+  K  G  K  F S  
Sbjct: 62  GDINDHETLVKAIKQVDIVICAAGR--------LLIEDQVKIIKAIKEAGNVKKFFPSEF 113

Query: 194 NCDKH------PEVPLMEIKYCTEQFLQDSGLPHVIIR 225
             D        P   + E K    + ++  G+P+  + 
Sbjct: 114 GLDVDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLC 151

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score =  135 bits (340), Expect = 5e-38
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 23/165 (13%)

Query: 75  MSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP-------RPAPADFLRDW 127
           M      + + +L+VG TG +G++IV  ++  G+    L RP       +     + +  
Sbjct: 1   MD-----KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL 55

Query: 128 GATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKY 187
           GA ++ A L   + +   L  V  VI    G             ++ L++  K  G  K 
Sbjct: 56  GAKLIEASLDDHQRLVDALKQVDVVISALAGGVLSH----HILEQLKLVEAIKEAGNIKR 111

Query: 188 VFYS-------IHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIR 225
              S       I      P       K    + ++ + +P+  + 
Sbjct: 112 FLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVS 156

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score =  131 bits (332), Expect = 8e-38
 Identities = 29/150 (19%), Positives = 64/150 (42%), Gaps = 13/150 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I +VG+TG +G+ +++      Y +    R +        +  A   + D + PE +   
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVPQYNNVKAVHFDVDWT-PEEMAKQ 60

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEV---- 201
           L G+  +I+ +    +    KVD  G V L+Q A+   +++++  S     +  +     
Sbjct: 61  LHGMDAIINVSGSGGKSL-LKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAG 119

Query: 202 -----PLMEIKYCTEQFL-QDSGLPHVIIR 225
                     K+  + +L +++ L + II+
Sbjct: 120 FDALKDYYIAKHFADLYLTKETNLDYTIIQ 149

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score =  131 bits (332), Expect = 5e-37
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 7/150 (4%)

Query: 86  ILVVGATGTLGRQIVRRALDEG-YDVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIP 143
           ++V G TG  G  + R  L++G + VR + R PR   A  LR  GA VV  D      + 
Sbjct: 8   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIME 67

Query: 144 ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPE--- 200
             L G +              ++   +GK  L   A+ +G+   V+  + N  K      
Sbjct: 68  LALNGAYATFIVTNYWESCSQEQEVKQGK-LLADLARRLGLHYVVYSGLENIKKLTAGRL 126

Query: 201 -VPLMEIKYCTEQFLQDSGLPHVIIRLWPY 229
                + K   E++ +D G+P   +RL  Y
Sbjct: 127 AAAHFDGKGEVEEYFRDIGVPMTSVRLPCY 156

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score =  118 bits (297), Expect = 9e-32
 Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 17/151 (11%)

Query: 83  PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP---RPAPADFLRDWGATVVNADLSKP 139
            + IL+ G TG +G  +V+ +L  G+      RP   +    D  +  GA +V  +L + 
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEH 70

Query: 140 ETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--- 196
           E +   +  V  VI                  +  +++  K  G  K    S    +   
Sbjct: 71  EKLVELMKKVDVVISALAFPQI--------LDQFKILEAIKVAGNIKRFLPSDFGVEEDR 122

Query: 197 ---KHPEVPLMEIKYCTEQFLQDSGLPHVII 224
                P   L+E K    + ++++ +P+  +
Sbjct: 123 INALPPFEALIERKRMIRRAIEEANIPYTYV 153

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score =  114 bits (287), Expect = 2e-30
 Identities = 30/155 (19%), Positives = 58/155 (37%), Gaps = 22/155 (14%)

Query: 84  TSILVVGATGTLGRQIVRRALDEGYDVRCLVRP--------RPAPADFLRDWGATVVNAD 135
             I++ G TG +G+ +VR +L   +      RP             +  R  G T++  +
Sbjct: 5   EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64

Query: 136 LSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC 195
           + + E + + L  V  VI                  ++ +I   KA G  K    S   C
Sbjct: 65  MEEHEKMVSVLKQVDIVISALPFP--------MISSQIHIINAIKAAGNIKRFLPSDFGC 116

Query: 196 DKH------PEVPLMEIKYCTEQFLQDSGLPHVII 224
           ++       P   ++E K    + ++ + LP+  +
Sbjct: 117 EEDRIKPLPPFESVLEKKRIIRRAIEAAALPYTYV 151

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score =  113 bits (283), Expect = 1e-29
 Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 23/166 (13%)

Query: 74  NMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP------APADFLRDW 127
            +SP  P     +L+ GATG +G+ +   +LD       L RP P           L D 
Sbjct: 2   TVSP-VPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDK 60

Query: 128 GATVVNADLSKPETIPATLVG--VHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQ 185
           GA +V   +++ E +   L    +  V+    G             ++AL++  KA+G  
Sbjct: 61  GAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGESI--------LDQIALVKAMKAVGTI 112

Query: 186 KYVFYSIHNCDKH------PEVPLMEIKYCTEQFLQDSGLPHVIIR 225
           K    S    D +      P + +   K    Q +++SG+P   I 
Sbjct: 113 KRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYIC 158

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score =  111 bits (280), Expect = 2e-29
 Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 7/143 (4%)

Query: 85  SILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           SI V GATG LG  +++  L +     +  +VR     A  L D G  V + D ++PE++
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR-NVEKASTLADQGVEVRHGDYNQPESL 60

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
                GV  ++  +    +  +          +++ A+  G++   +      ++   +P
Sbjct: 61  QKAFAGVSKLLFISGPHYDNTLL---IVQHANVVKAARDAGVKHIAYTGYAFAEESI-IP 116

Query: 203 LMEIKYCTEQFLQDSGLPHVIIR 225
           L  +   TE  ++ + +P+  +R
Sbjct: 117 LAHVHLATEYAIRTTNIPYTFLR 139

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score =  106 bits (266), Expect = 5e-28
 Identities = 24/154 (15%), Positives = 55/154 (35%), Gaps = 20/154 (12%)

Query: 84  TSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
            ++L++GA G + R ++ +  D+         R +PA         + ++  D+     +
Sbjct: 24  KNVLILGAGGQIARHVINQLADKQTIKQTLFAR-QPAKIHKPYPTNSQIIMGDVLNHAAL 82

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS----------- 191
              + G   V    TG        +D +   ++I   KA  +++ +F             
Sbjct: 83  KQAMQGQDIVYANLTGED------LDIQAN-SVIAAMKACDVKRLIFVLSLGIYDEVPGK 135

Query: 192 IHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIR 225
               +       ++        ++ SGL + I+R
Sbjct: 136 FVEWNNAVIGEPLKPFRRAADAIEASGLEYTILR 169

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score =  101 bits (253), Expect = 1e-25
 Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 7/147 (4%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAPADFLRDWGATVVNADLSKPETIP 143
           +I++ GATG LG  I  +A+    D     VR              +V   D    E++ 
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHIGVR-NVEKVPDDWRGKVSVRQLDYFNQESMV 60

Query: 144 ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPL 203
               G+ TV+   +       K++       L+  AK  G+   +F   +    +    +
Sbjct: 61  EAFKGMDTVVFIPSIIHPSF-KRIPEVE--NLVYAAKQSGVAHIIFIGYYADQHNNPFHM 117

Query: 204 MEIKYCTEQFLQDSGLPHVIIRLWPYW 230
                   + L  SG+ +  +R     
Sbjct: 118 SPYFGYASRLLSTSGIDYTYVR--MAM 142

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score =  100 bits (252), Expect = 2e-25
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 11/147 (7%)

Query: 86  ILVVGATGTLGRQIVRR--ALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP 143
           I + GATG LG  ++           +  +VR  PA A  L   G TV  AD      + 
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVR-NPAKAQALAAQGITVRQADYGDEAALT 60

Query: 144 ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPL 203
           + L GV  ++  ++    +   +        +I  AKA G++   + S+ + D  P + L
Sbjct: 61  SALQGVEKLLLISSSEVGQRAPQHR-----NVINAAKAAGVKFIAYTSLLHADTSP-LGL 114

Query: 204 MEIKYCTEQFLQDSGLPHVIIRLWPYW 230
            +    TE+ L DSG+ + ++R    W
Sbjct: 115 ADEHIETEKMLADSGIVYTLLR--NGW 139

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 98.0 bits (244), Expect = 6e-24
 Identities = 38/157 (24%), Positives = 61/157 (38%), Gaps = 14/157 (8%)

Query: 75  MSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADFLRDW-GATVV 132
           M+         I VVGATG  G  ++R A   G+ VR  V   +   A+ L+     T+ 
Sbjct: 1   MAQQKKT----IAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLF 56

Query: 133 NADLS-KPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
              L      +     G H      T +  + I      GK       +A  IQ Y++ S
Sbjct: 57  QGPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIA----IGKDLADAAKRAGTIQHYIYSS 112

Query: 192 IHNCDKH---PEVPLMEIKYCTEQFLQDSGLPHVIIR 225
           + +   +   P VP+   K+  E +++  GLP   + 
Sbjct: 113 MPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVY 149

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 95.2 bits (237), Expect = 8e-24
 Identities = 28/157 (17%), Positives = 57/157 (36%), Gaps = 19/157 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I+++GA+G +G  ++  AL+ G++V  +VR  P       +    V  AD+S  + +   
Sbjct: 7   IVLIGASGFVGSALLNEALNRGFEVTAVVR-HPEKIKIENE-HLKVKKADVSSLDEVCEV 64

Query: 146 LVGVHTVIDCATGRPEEP-IKKVDWEGKVALIQCAKAMGIQKYVFYS-IHNCDKHPEVPL 203
             G   VI         P I     +  + +I   K  G+ +++      +    P + L
Sbjct: 65  CKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRL 124

Query: 204 MEIKYCT---------------EQFLQDSGLPHVIIR 225
           M+                       +++  +  V   
Sbjct: 125 MDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS 161

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 90.1 bits (223), Expect = 5e-22
 Identities = 19/155 (12%), Positives = 47/155 (30%), Gaps = 24/155 (15%)

Query: 86  ILVVGATGTLGRQIVRRALDE-GYDVRCLVR--PRPAPADFLRDWGATVVNADLSKPETI 142
           I ++GA G + + +    L      +    R      P + +     TV+      P  +
Sbjct: 8   ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXL 67

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD------ 196
              +     V   A                 ++++      I++ +  S+          
Sbjct: 68  EQAVTNAEVVFVGAMESG---------SDMASIVKALSRXNIRRVIGVSMAGLSGEFPVA 118

Query: 197 ------KHPEVPLMEIKYCTEQFLQDSGLPHVIIR 225
                  +  +  ++ +      L++S L + I+R
Sbjct: 119 LEKWTFDNLPISYVQGERQARNVLRESNLNYTILR 153

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 88.5 bits (220), Expect = 1e-20
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 30/180 (16%)

Query: 75  MSPGTPVRPTS---ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATV 131
           M      RP +     V+GATG LG    R     G+D+  + RP  +    L       
Sbjct: 2   MDEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRP-SSQIQRLAYLEPEC 60

Query: 132 VNADLSKPETIPATLVGVHTVIDCA-----TGRPEEPIKKVDWEGKVALIQCAKAMGIQK 186
             A++     +   L G+  VI  A       R  +                     + +
Sbjct: 61  RVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPR 120

Query: 187 YVFYS-------------IHNCDKHPEVPLMEIKYCT-----EQF---LQDSGLPHVIIR 225
            ++                H    +  +P  +  Y       ++       +GLP VI  
Sbjct: 121 ILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGI 180

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 82.9 bits (205), Expect = 4e-19
 Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 7/146 (4%)

Query: 85  SILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           S+ ++GA+G  GR +++  L++G    V  + R R    D            D  K +  
Sbjct: 20  SVFILGASGETGRVLLKEILEQGLFSKVTLIGR-RKLTFDEEAYKNVNQEVVDFEKLDDY 78

Query: 143 PATLVGVHTVIDCATGRPEEPIK----KVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH 198
            +   G      C      +       +VD +  +   + AKA G + +   S    DK 
Sbjct: 79  ASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS 138

Query: 199 PEVPLMEIKYCTEQFLQDSGLPHVII 224
                +++K   E  +++       +
Sbjct: 139 SNFLYLQVKGEVEAKVEELKFDRYSV 164

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 78.1 bits (192), Expect = 2e-17
 Identities = 26/106 (24%), Positives = 36/106 (33%), Gaps = 3/106 (2%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I V+GATG  G  IV  A   G++V  +VR  P  A      GATV            A 
Sbjct: 3   IAVLGATGRAGSAIVAEARRRGHEVLAVVR-DPQKAADR--LGATVATLVKEPLVLTEAD 59

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
           L  V  V+D  +         +  +    L+   +           
Sbjct: 60  LDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG 105

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 76.9 bits (189), Expect = 4e-17
 Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 6/106 (5%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I ++GATG  G +I+  A + G++V  +VR               ++  D+       + 
Sbjct: 3   IGIIGATGRAGSRILEEAKNRGHEVTAIVR-NAGKITQTHK-DINILQKDIFDLTL--SD 58

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
           L   + V+D     P+E   +        LI         + +   
Sbjct: 59  LSDQNVVVDAYGISPDEA--EKHVTSLDHLISVLNGTVSPRLLVVG 102

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 67.7 bits (166), Expect = 8e-14
 Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 12/148 (8%)

Query: 83  PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           P  +L+ GATG  G  ++ R L E    + +   R A A+  R      ++  +     +
Sbjct: 5   PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPR------LDNPVGPLAEL 58

Query: 143 PATLV-GVHTVIDC-----ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD 196
              L   + T   C          EE  + VD++  +A+ + A  MG + Y+  S    D
Sbjct: 59  LPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGAD 118

Query: 197 KHPEVPLMEIKYCTEQFLQDSGLPHVII 224
               +    +K   EQ LQ+ G P + I
Sbjct: 119 AKSSIFYNRVKGELEQALQEQGWPQLTI 146

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 59.0 bits (143), Expect = 2e-10
 Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 26/159 (16%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADFLRDWGATVVNADLSKPETIP 143
            IL+ G  G LG ++ RR   +G++V  L R  +P PA      G   + AD+++P+T+ 
Sbjct: 5   KILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPA------GVQTLIADVTRPDTLA 57

Query: 144 A-TLVGVHTVIDCAT--GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI----HNCD 196
           +   +    ++ C       +E  +    EG    +   +   +Q   F S         
Sbjct: 58  SIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEV 117

Query: 197 K---------HPEVPLMEIKYCTEQFLQDSGLPHVIIRL 226
           +           +    +     E  L        I+R 
Sbjct: 118 EEWLDEDTPPIAKDFSGKRMLEAEALLA--AYSSTILRF 154

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 57.0 bits (138), Expect = 7e-10
 Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           +LV GA G LGR +  R       +R        PA          V  DL+    + A 
Sbjct: 6   LLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGP----NEECVQCDLADANAVNAM 61

Query: 146 LVGVHTVIDCA---TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
           + G   ++        +P E I + +  G   L + A+A G  + VF S
Sbjct: 62  VAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFAS 110

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 57.4 bits (138), Expect = 8e-10
 Identities = 29/182 (15%), Positives = 48/182 (26%), Gaps = 40/182 (21%)

Query: 87  LVVGATGTLGRQIVRRALDEGY-----DVRCLVRPRPAPADFLRDWGATVVNADLSKPET 141
           L+VG TG +G  +               V  + R R  PA +  D     V  D+S P+ 
Sbjct: 5   LIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR-RTRPA-WHEDNPINYVQCDISDPDD 62

Query: 142 IPATLVGVHTVIDCA------TGRPEEPIKKVDWEGKVALIQCAKAMGIQ---------- 185
             A L  +  V              +E  +         ++                   
Sbjct: 63  SQAKLSPLTDVTHVFYVTWANRSTEQENCEANSK-MFRNVLDAVIPNCPNLKHISLQTGR 121

Query: 186 KYVFYSIHNCDK--HPEVPLME---------IKYCTEQFL-----QDSGLPHVIIRLWPY 229
           K+      +  K    + P  E           Y  E  +     +  GL   + R    
Sbjct: 122 KHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNI 181

Query: 230 WA 231
           + 
Sbjct: 182 FG 183

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 31/175 (17%), Positives = 55/175 (31%), Gaps = 31/175 (17%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           +LV GA G +G  I        ++VR              +    +V  DL+  + +   
Sbjct: 5   LLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA----AEAHEEIVACDLADAQAVHDL 60

Query: 146 LVGVHTVIDCA---TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS-IHNCDKHPEV 201
           +     +I        RP   I + +  G   L + A+ +G  + VF S  H    +P  
Sbjct: 61  VKDCDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRT 120

Query: 202 PLMEI-------------KYCTEQFLQD----SGLPHVIIRLWPYWAICSTYTRR 239
             ++              K   E           +  + IR      I S + + 
Sbjct: 121 TRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIR------IGSCFPKP 169

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 6/89 (6%)

Query: 75  MSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP--RPAPADFLRDWGA--- 129
           M+   P+   +  VVG TG +   +V+  L +GY V   VR          L +      
Sbjct: 1   MATQHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGD 60

Query: 130 -TVVNADLSKPETIPATLVGVHTVIDCAT 157
             +  ADL+   +  A + G   V   AT
Sbjct: 61  LKIFRADLTDELSFEAPIAGCDFVFHVAT 89

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 14/91 (15%)

Query: 75  MSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGA---- 129
           +  G+ V     LV GA G +   +V + L+ GY VR   R   +    L+  W A    
Sbjct: 8   LPEGSLV-----LVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPG 61

Query: 130 ---TVVNADLSKPETIPATLVGVHTVIDCAT 157
              T V  D+ K       + G   V   A+
Sbjct: 62  RFETAVVEDMLKQGAYDEVIKGAAGVAHIAS 92

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 46.0 bits (109), Expect = 4e-06
 Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 7/121 (5%)

Query: 61  SAGGGTS--GTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP-- 116
           S G  T+    V  V  + G  V+    +V+  TG +G +       EG +V    R   
Sbjct: 95  SNGSNTTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLD 154

Query: 117 --RPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVA 174
             + A     + +   V  A+ +   +    + G H V   A     E + +  W+ + +
Sbjct: 155 KAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF-TAGAIGLELLPQAAWQNESS 213

Query: 175 L 175
           +
Sbjct: 214 I 214

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 8/80 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLRD-WGA----TVVNADLS 137
           + V G TG LG  I++  L+ GY V   +R  P       FL +  GA       NADLS
Sbjct: 4   VCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLS 63

Query: 138 KPETIPATLVGVHTVIDCAT 157
            P++  A + G   +   A+
Sbjct: 64  NPDSFAAAIEGCVGIFHTAS 83

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 32/166 (19%), Positives = 55/166 (33%), Gaps = 28/166 (16%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRC---LVRPRPAPADFLRDW-GATVVNADLSKPET 141
           + + G  G +G  I    L+ G  V         R    + L+D    T V   ++    
Sbjct: 24  VFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR---EHLKDHPNLTFVEGSIADHAL 80

Query: 142 IPATLVGVH--TVIDCA--TGRPEEPIKKVDW--EGKVALIQCAKAMGIQKYVFYS---- 191
           +   +  +    V+  A     P++          G   ++Q AK   + ++V++     
Sbjct: 81  VNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALC 140

Query: 192 -------IHNCDKHPEVPLM----EIKYCTEQFLQDSGLPHVIIRL 226
                        HP  P        K   E +L+ SGL  V  RL
Sbjct: 141 YGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFRL 186

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 71  QAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL 124
           +   +  G+P+    + + G+ G +GR +  +    G++V  LVR  P P    
Sbjct: 138 RTSTLFDGSPLT---VAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRF 188

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRP--RPAPADFLRD-WGA----TVVNADLSK 138
           + V GA+G +G  +V R L+ GY VR  VR          L D   A    T+  ADL+ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLAD 67

Query: 139 PETIPATLVGVHTVIDCAT 157
             +    + G   V   AT
Sbjct: 68  EGSFDEAIKGCTGVFHVAT 86

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 17/129 (13%)

Query: 80  PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCL----------VRPRPAPADFLRDWGA 129
           P +P   L+ G  G +G  ++   L     V  L          +    +     +    
Sbjct: 24  PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 83

Query: 130 TVVNADLSKPETIPATLVGVHTVIDCA--TGRP---EEPIKKVDW--EGKVALIQCAKAM 182
             +  D+   +       GV  V+  A     P    +PI       +G + ++  A+  
Sbjct: 84  KFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA 143

Query: 183 GIQKYVFYS 191
            +Q + + +
Sbjct: 144 KVQSFTYAA 152

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 19/156 (12%)

Query: 66  TSGTVQAVNMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR 125
            + T + +      P     I + GA G +   I RR   EG+ V      +    + + 
Sbjct: 12  GAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKN---EHMT 68

Query: 126 DWGATV--VNADLSKPETIPATLVGVHTVIDCA--------TGRPEEPIKKVDWEGKVAL 175
           +          DL   E       GV  V + A               I   +      +
Sbjct: 69  EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNM 128

Query: 176 IQCAKAMGIQKYVF------YSIHNCDKHPEVPLME 205
           I+ A+  GI+++ +      Y      +   V L E
Sbjct: 129 IEAARINGIKRFFYASSACIYPEFKQLETTNVSLKE 164

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 42.6 bits (100), Expect = 7e-05
 Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 23/86 (26%)

Query: 77  PGTPVRPTSILVVGATGTLGRQIVR---RALDEGYDVRCLVRPRPAPA------------ 121
           PG      ++L+ GATG LGR +V    R LD    + CLVR                  
Sbjct: 67  PGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSG 126

Query: 122 --DFLRDWGA------TVVNADLSKP 139
             + LR +         VV  D S+P
Sbjct: 127 DPELLRHFKELAADRLEVVAGDKSEP 152

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 13/108 (12%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           ++L  G  G   R + R    +G+ +    R  P   + +R  GA  +     +P     
Sbjct: 7   TLLSFGH-GYTARVLSRALAPQGWRIIGTSR-NPDQMEAIRASGAEPLLWPGEEPS---- 60

Query: 145 TLVGV-HTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
            L GV H +I  A     +P+        +     A+A   +   + S
Sbjct: 61  -LDGVTHLLISTAPDSGGDPVLAA-----LGDQIAARAAQFRWVGYLS 102

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 19/59 (32%), Positives = 25/59 (42%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           IL+ GA+  +G     R L+ G+ V    R   A    LR  GA  +  D S    I A
Sbjct: 30  ILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMA 88

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 17/116 (14%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCL-------VRPRPAPADFLRDWGATVVNADLSK 138
           IL+ G  G +G  + R  +  G +V  L       + P      FL      +   DLS 
Sbjct: 10  ILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLSD 69

Query: 139 PETIP--ATLVGV-HTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
              +   A+   V  +        P + +  VD      L+    ++G+ K V  S
Sbjct: 70  VRLVYHLASHKSVPRSFKQ-----PLDYLDNVD--SGRHLLALCTSVGVPKVVVGS 118

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 40.6 bits (96), Expect = 3e-04
 Identities = 39/180 (21%), Positives = 56/180 (31%), Gaps = 53/180 (29%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSK 138
           +LV G  G +G  IV   L  G +V  L        D L          G      DL  
Sbjct: 3   VLVTGGAGFIGSHIVEDLLARGLEVAVL--------DNLATGKRENVPKGVPFFRVDLRD 54

Query: 139 PETIPATLVGVH--TVIDCATGRP------EEPIKKVDWE----GKVALIQCAKAMGIQK 186
            E +           V   A  +       E+P+   D+E    G + L++  +  G++K
Sbjct: 55  KEGVERAFREFRPTHVSHQA-AQASVKVSVEDPVL--DFEVNLLGGLNLLEACRQYGVEK 111

Query: 187 YVFYS--------------IHNCDKHPEVPLM---EIKYCTEQFLQD----SGLPHVIIR 225
            VF S                  +  P  P       K   E +L       GL  V +R
Sbjct: 112 LVFASTGGAIYGEVPEGERAE--ETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLR 169

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 11/73 (15%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           +LV GATG LGR + +      +        R  P              +L     +   
Sbjct: 5   VLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP---------KFEQVNLLDSNAVHHI 55

Query: 146 L--VGVHTVIDCA 156
           +     H ++ CA
Sbjct: 56  IHDFQPHVIVHCA 68

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 39.5 bits (93), Expect = 6e-04
 Identities = 30/172 (17%), Positives = 60/172 (34%), Gaps = 42/172 (24%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCL----------VRPRPAPADFLRDWGATVVNA 134
            IL+ G  G LG  ++   L +G+++  +          + P           G +V+  
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVA---------GLSVIEG 72

Query: 135 DLSKPETIPATLVG--VHTVID-CATGR-PEEPIKKVDWE----GKVALIQCAKAMGIQK 186
            ++    +           V+   A  + P++  +  D      G + + + A   G+++
Sbjct: 73  SVTDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAE--DAATNVQGSINVAKAASKAGVKR 130

Query: 187 YVFYSIHNCDKHPE-VPLMEI------------KYCTEQFLQDSGLPHVIIR 225
            + +    C   P  VP+               K   E FL  S +P V +R
Sbjct: 131 LLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLR 182

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	269
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.96
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.96
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.95
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.95
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.95
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.95
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.95
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.94
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.94
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.94
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.94
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.94
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.94
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.94
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.94
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.94
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.94
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.94
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.94
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.94
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.94
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.93
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.93
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.93
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.93
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.93
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.93
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.93
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.93
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.93
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.93
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.93
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.93
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.93
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.92
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.92
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.92
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.92
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.92
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.92
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.92
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.92
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.92
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.92
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.92
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.92
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.92
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.92
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.91
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.91
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.91
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.91
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.91
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.91
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.91
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.91
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.91
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.91
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.91
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.91
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.9
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.9
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.9
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.9
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.9
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.9
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.9
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.9
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.9
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.9
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.9
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.89
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.89
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.89
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.89
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.89
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.89
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.89
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.89
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.89
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.89
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.89
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.89
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.89
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.89
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.89
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.89
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.89
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.89
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.89
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.89
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.89
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.89
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.89
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.89
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.89
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.89
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.89
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.88
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.88
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.88
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.88
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.88
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.88
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.88
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.88
1spx_A	278	Short-chain reductase family member (5L265); paral	99.88
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.88
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.88
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.88
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.88
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.88
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.88
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.88
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.88
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.88
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.88
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.88
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.88
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.88
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.88
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.88
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.88
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.88
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.88
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.87
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.87
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.87
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.87
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.87
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.87
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.87
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.87
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.87
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.87
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.87
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.87
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.87
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.87
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.87
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.87
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.87
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.87
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.87
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.87
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.87
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.87
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.87
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.87
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.87
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.87
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.87
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.87
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.87
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.87
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.87
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.87
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.87
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.87
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.87
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.87
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.87
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.87
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.87
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.87
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.87
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.87
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.87
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.87
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.87
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.87
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.86
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.86
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.86
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.86
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.86
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.86
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.86
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.86
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.86
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.86
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.86
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.86
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.86
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.86
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.86
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.86
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.86
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.86
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.86
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.86
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.86
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.86
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.86
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.86
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.86
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.86
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.86
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.86
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.86
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.86
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.86
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.86
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.86
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.86
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.86
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.86
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.86
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.86
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.86
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.86
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.86
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.85
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.85
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.85
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.85
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.85
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.85
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.85
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.85
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.85
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.85
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.85
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.85
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.85
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.85
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.85
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.85
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.85
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.85
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.85
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.85
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.85
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.85
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.85
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.85
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.85
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.85
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.85
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.85
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.85
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.84
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.84
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.84
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.84
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.84
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.84
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.84
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.84
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.84
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.84
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.84
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.84
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.84
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.84
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.84
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.84
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.84
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.83
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.83
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.83
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.83
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.83
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.83
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.83
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.83
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.83
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.83
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.83
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.83
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.83
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.83
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.83
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.82
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.82
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.82
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.82
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.81
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.81
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.81
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.81
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.81
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.8
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.8
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.79
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.79
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.78
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.78
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.77
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.75
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.73
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.72
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.7
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.7
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.69
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.69
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.69
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.65
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.62
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.62
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.62
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.6
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.59
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.58
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.57
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.53
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.53
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.4
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.35
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.29
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.1
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.06
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.99
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.98
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.98
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.98
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.98
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.94
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.87
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.85
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.85
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.84
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.78
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.77
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.73
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.67
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.66
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.63
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.61
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.51
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.44
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.41
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.39
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.39
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.31
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.28
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.24
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.23
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.22
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.18
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.09
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.08
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.08
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.06
4g65_A	461	TRK system potassium uptake protein TRKA; structur	98.04
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.04
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.03
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.02
1lnq_A	336	MTHK channels, potassium channel related protein;	98.01
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.99
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.98
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.93
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.92
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.89
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.86
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.85
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.81
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.8
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.8
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.78
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.76
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.75
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.75
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.74
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.74
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.74
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.72
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.72
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.71
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.7
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.7
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.69
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.69
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.68
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.68
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.67
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.67
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.67
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.65
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.65
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.64
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.64
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.64
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.63
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.63
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.62
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.6
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.59
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.58
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.57
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.57
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.57
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.57
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	97.57
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.57
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.57
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.55
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.54
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.54
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.53
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.48
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	97.48
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.48
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.47
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.47
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.45
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.45
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.45
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.44
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.44
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.43
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.42
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.41
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	97.41
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.41
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.41
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.4
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.39
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.39
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.37
2duw_A	145	Putative COA-binding protein; ligand binding prote	97.37
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.37
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	97.36
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.36
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.35
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.34
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	97.34
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.33
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.32
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	97.32
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.32
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.32
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.32
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.31
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.31
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.3
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.29
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.28
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.28
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.27
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.26
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.25
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.23
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	97.21
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.2
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.19
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.19
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.18
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.18
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.18
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	97.18
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.18
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.18
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.17
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.17
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.16
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	97.16
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.16
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.15
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.14
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.14
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	97.14
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.12
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.12
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.12
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.12
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.11
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.1
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.1
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.1
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	97.09
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.09
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.09
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.08
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	97.08
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.08
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.07
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.07
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	97.06
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.04
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.04
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.03
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.03
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.03
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.03
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.02
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.01
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.01
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.0
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.99
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	96.98
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	96.98
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.97

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=9.1e-29  Score=208.82  Aligned_cols=153  Identities=24%  Similarity=0.316  Sum_probs=130.9

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCC-EEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA-TVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~-~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ..+++|+|+||||+|+||++++++|+++|++|++++|++++..+ +...++ +++.+|++  +++.++++++|+||||||
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~-~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag   93 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE-LRERGASDIVVANLE--EDFSHAFASIDAVVFAAG   93 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCC
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH-HHhCCCceEEEcccH--HHHHHHHcCCCEEEECCC
Confidence            35788999999999999999999999999999999998665433 334578 99999999  888899999999999999


Q ss_pred             CCC---CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCC-----CCCcHHHHHHHHHHHHHhcCCCEEEEEcCcc
Q 024290          158 GRP---EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH-----PEVPLMEIKYCTEQFLQDSGLPHVIIRLWPY  229 (269)
Q Consensus       158 ~~~---~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~-----~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i  229 (269)
                      ...   ++..+++|+.++.++++++++.++++||++||.+....     +..+|+.+|.++|+++++.+++++++||+++
T Consensus        94 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~gi~~~~lrpg~v  173 (236)
T 3e8x_A           94 SGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRPGPL  173 (236)
T ss_dssp             CCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHHHSSSEEEEEEECSE
T ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHHHCCCCEEEEeCCcc
Confidence            543   45567889999999999999999999999999765432     4567999999999999999999999999999


Q ss_pred             cccCc
Q 024290          230 WAICS  234 (269)
Q Consensus       230 ~g~~~  234 (269)
                      +|+..
T Consensus       174 ~~~~~  178 (236)
T 3e8x_A          174 SNEES  178 (236)
T ss_dssp             ECSCC
T ss_pred             cCCCC
Confidence            99854

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.96  E-value=3.3e-28  Score=203.80  Aligned_cols=151  Identities=19%  Similarity=0.244  Sum_probs=127.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC-CC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR-PE  161 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~-~~  161 (269)
                      ||+|+||||+|+||+++++.|+++|++|++++|++++....  ..+++++.+|++|.+++.++++++|+||||+|.. ..
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~   81 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNN   81 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC----
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCC
Confidence            47999999999999999999999999999999986654332  1478999999999999999999999999999853 23


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC------------CCCCCCcHHHHHHHHHHHHH----hcCCCEEEEE
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC------------DKHPEVPLMEIKYCTEQFLQ----DSGLPHVIIR  225 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~------------~~~~~~~y~~sK~~~e~~~~----~~gi~~~ilr  225 (269)
                      ...+++|+.++.++++++++.++++|||+||.++            +..+..+|+.+|.+.|.+++    +.+++++++|
T Consensus        82 ~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilr  161 (227)
T 3dhn_A           82 PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS  161 (227)
T ss_dssp             --CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhccCccEEEEe
Confidence            4477899999999999999999999999999764            22346789999999996653    4789999999


Q ss_pred             cCcccccCcc
Q 024290          226 LWPYWAICST  235 (269)
Q Consensus       226 p~~i~g~~~~  235 (269)
                      |+++||+...
T Consensus       162 p~~v~g~~~~  171 (227)
T 3dhn_A          162 PAADMRPGVR  171 (227)
T ss_dssp             CCSEEESCCC
T ss_pred             CCcccCCCcc
Confidence            9999998654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.96  E-value=3e-28  Score=203.33  Aligned_cols=147  Identities=20%  Similarity=0.309  Sum_probs=130.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCC-CCcHHHHhcCccEEEEcCCCCCCc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK-PETIPATLVGVHTVIDCATGRPEE  162 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d-~~~l~~~~~~~d~vi~~ag~~~~~  162 (269)
                      |+|+||||+|+||++++++|+++|++|++++|++++....   .+++++++|++| ++++.++++++|+||||+|... .
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~-~   76 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG-K   76 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT-S
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC-C
Confidence            4899999999999999999999999999999986654432   578999999999 9999999999999999999655 3


Q ss_pred             cchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCC---------CCcHHHHHHHHHHHH-HhcCCCEEEEEcCccccc
Q 024290          163 PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP---------EVPLMEIKYCTEQFL-QDSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       163 ~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~---------~~~y~~sK~~~e~~~-~~~gi~~~ilrp~~i~g~  232 (269)
                      ..+++|+.++.++++++++.++++||++||.++....         ..+|+.+|.++|+++ +..+++++++||+++||+
T Consensus        77 ~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilrp~~v~g~  156 (219)
T 3dqp_A           77 SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEE  156 (219)
T ss_dssp             SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEEECSEECS
T ss_pred             CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEEeCceEecC
Confidence            4778999999999999999999999999998764322         457999999999999 789999999999999998


Q ss_pred             Cc
Q 024290          233 CS  234 (269)
Q Consensus       233 ~~  234 (269)
                      ..
T Consensus       157 ~~  158 (219)
T 3dqp_A          157 EA  158 (219)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.95  E-value=1.5e-27  Score=209.18  Aligned_cols=148  Identities=19%  Similarity=0.147  Sum_probs=127.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC---
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR---  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~---  159 (269)
                      +|+||||||+||||++|++.|+++|++|++++|++.. .+ +.  +++++.+|++ .+++.++++++|+|||+|+..   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~-~~--~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~   76 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KA-IN--DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ   76 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-cc-CC--ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC
Confidence            5799999999999999999999999999999998332 22 32  7899999999 999999999999999999953   


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHHHHHHHHh----cCCCEE
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQD----SGLPHV  222 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~~e~~~~~----~gi~~~  222 (269)
                      .+...+++|+.++.++++++++.++++|||+||..+.             ..|.++|+.+|.+.|+++++    .+++++
T Consensus        77 ~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~  156 (311)
T 3m2p_A           77 GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIK  156 (311)
T ss_dssp             SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHSCCEEE
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCEE
Confidence            4567788999999999999999999999999996542             23457899999999998865    799999


Q ss_pred             EEEcCcccccCcc
Q 024290          223 IIRLWPYWAICST  235 (269)
Q Consensus       223 ilrp~~i~g~~~~  235 (269)
                      ++||+++||+...
T Consensus       157 ilRp~~v~G~~~~  169 (311)
T 3m2p_A          157 NLRFAHLYGFNEK  169 (311)
T ss_dssp             EEEECEEECSCC-
T ss_pred             EEeeCceeCcCCC
Confidence            9999999998754

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.95  E-value=4.6e-28  Score=215.69  Aligned_cols=155  Identities=17%  Similarity=0.241  Sum_probs=131.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c-------CCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D-------WGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~-------~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      +++|+||||||+||||++|++.|+++|++|++++|+.......+.   .       .+++++.+|++|.+++.++++++|
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  102 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD  102 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence            567899999999999999999999999999999997654332221   1       478999999999999999999999


Q ss_pred             EEEEcCCCC-------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHHH
Q 024290          151 TVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCT  210 (269)
Q Consensus       151 ~vi~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~~  210 (269)
                      +|||+|+..       .+...+++|+.++.+++++|++.++++|||+||..+.             ..|.++|+.+|.+.
T Consensus       103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  182 (351)
T 3ruf_A          103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVN  182 (351)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHH
Confidence            999999953       2345678999999999999999999999999997542             13457899999999


Q ss_pred             HHHHHh----cCCCEEEEEcCcccccCcc
Q 024290          211 EQFLQD----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       211 e~~~~~----~gi~~~ilrp~~i~g~~~~  235 (269)
                      |++++.    .+++++++||+++||+...
T Consensus       183 E~~~~~~~~~~g~~~~ilRp~~v~G~~~~  211 (351)
T 3ruf_A          183 EIYAQVYARTYGFKTIGLRYFNVFGRRQD  211 (351)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECSEESTTCC
T ss_pred             HHHHHHHHHHhCCCEEEEeeCceeCcCCC
Confidence            988753    6999999999999998654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.95  E-value=6.8e-27  Score=192.34  Aligned_cols=148  Identities=24%  Similarity=0.227  Sum_probs=127.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~  161 (269)
                      ++|+|+||||+|+||++++++|+++|++|++++|++++... +...+++++.+|++|++++.++++++|+||||++....
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~   80 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-EGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND   80 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-SSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-ccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCC
Confidence            34789999999999999999999999999999998654432 22347899999999999999999999999999996544


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCC------CCCcHHHHHHHHHHHHHhcCCCEEEEEcCccc
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH------PEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYW  230 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~------~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~  230 (269)
                      ....++|+.++.++++++++.++++||++||.++...      +..+|+.+|.++|+++++.+++++++||++++
T Consensus        81 ~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~lrp~~~~  155 (206)
T 1hdo_A           81 LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIG  155 (206)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSEEE
T ss_pred             CCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHhCCCCEEEEeCCccc
Confidence            3455689999999999999999999999999865332      34579999999999999999999999999984

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.95  E-value=1.5e-28  Score=220.65  Aligned_cols=155  Identities=14%  Similarity=0.260  Sum_probs=132.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCC-CCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLS-KPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~-d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .|++|+||||||+||||++|++.|+++ |++|++++|+.+.........+++++.+|++ |.+.+.++++++|+|||+|+
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~  100 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA  100 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence            467899999999999999999999998 9999999998877666555578999999999 89999999999999999999


Q ss_pred             CCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC--------------------CCCCcHHHHHHHH
Q 024290          158 GRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------------HPEVPLMEIKYCT  210 (269)
Q Consensus       158 ~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~--------------------~~~~~y~~sK~~~  210 (269)
                      ...       +...+++|+.++.+++++|++.+ ++|||+||..+..                    .|.++|+.+|.+.
T Consensus       101 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~  179 (372)
T 3slg_A          101 IATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLM  179 (372)
T ss_dssp             CCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHH
T ss_pred             cccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHH
Confidence            533       34566789999999999999999 9999999974311                    2334799999999


Q ss_pred             HHHHHhc---CCCEEEEEcCcccccCcc
Q 024290          211 EQFLQDS---GLPHVIIRLWPYWAICST  235 (269)
Q Consensus       211 e~~~~~~---gi~~~ilrp~~i~g~~~~  235 (269)
                      |++++..   +++++++||+++||+...
T Consensus       180 E~~~~~~~~~g~~~~ilRp~~v~G~~~~  207 (372)
T 3slg_A          180 DRVIWGYGMEGLNFTLFRPFNWIGPGLD  207 (372)
T ss_dssp             HHHHHHHHTTTCEEEEEEECSEECSSCC
T ss_pred             HHHHHHHHHCCCCEEEEccccccCCCcc
Confidence            9999775   999999999999999754

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.95  E-value=3.1e-27  Score=199.75  Aligned_cols=153  Identities=18%  Similarity=0.224  Sum_probs=134.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      |++|+|+||||+|+||++++++|+++|+  +|++++|++++..+. ...++.++.+|++|++++.++++++|+||||||.
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~   94 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT   94 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-GGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-ccCCceEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence            5678999999999999999999999999  999999987654432 2236889999999999999999999999999995


Q ss_pred             CC----CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCC-EEEEEcCcccccC
Q 024290          159 RP----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLP-HVIIRLWPYWAIC  233 (269)
Q Consensus       159 ~~----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~-~~ilrp~~i~g~~  233 (269)
                      ..    ++.++++|+.++.++++++++.++++||++||.++...+..+|+.+|.++|.+++..+++ +++||||++||+.
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~vrpg~v~~~~  174 (242)
T 2bka_A           95 TRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDR  174 (242)
T ss_dssp             CHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHHTTCCSEEEEEECCEEECTT
T ss_pred             ccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCcchHHHHHHHHHHHHHhcCCCCeEEEcCceecCCC
Confidence            32    345677899999999999999999999999999887777789999999999999999995 9999999999986


Q ss_pred             c
Q 024290          234 S  234 (269)
Q Consensus       234 ~  234 (269)
                      .
T Consensus       175 ~  175 (242)
T 2bka_A          175 Q  175 (242)
T ss_dssp             G
T ss_pred             C
Confidence            4

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.94  E-value=5.1e-27  Score=210.12  Aligned_cols=156  Identities=17%  Similarity=0.245  Sum_probs=130.6

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHH--CCCeEEEEeCCCC------------CCccccccCCCEEEEcCCCCCCcHHH
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALD--EGYDVRCLVRPRP------------APADFLRDWGATVVNADLSKPETIPA  144 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~--~G~~V~~~~R~~~------------~~~~~~~~~~~~~i~~Dl~d~~~l~~  144 (269)
                      +.+++|+||||||+||||++|++.|++  +|++|++++|+..            .....+...+++++.+|++|++.+.+
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            357789999999999999999999999  9999999999754            11222233468999999999999999


Q ss_pred             H-hcCccEEEEcCCC-----CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC------------CCCCCCcHHHH
Q 024290          145 T-LVGVHTVIDCATG-----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC------------DKHPEVPLMEI  206 (269)
Q Consensus       145 ~-~~~~d~vi~~ag~-----~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~------------~~~~~~~y~~s  206 (269)
                      + ..++|+|||||+.     ..++..+++|+.++.++++++++.+++ |||+||.++            +..|.++|+.+
T Consensus        86 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~s  164 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENVYGFS  164 (362)
T ss_dssp             HTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHH
T ss_pred             hhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCChhHHH
Confidence            8 7899999999994     334567789999999999999999986 999999653            12345679999


Q ss_pred             HHHHHHHHHhcC--CCEEEEEcCcccccCcc
Q 024290          207 KYCTEQFLQDSG--LPHVIIRLWPYWAICST  235 (269)
Q Consensus       207 K~~~e~~~~~~g--i~~~ilrp~~i~g~~~~  235 (269)
                      |.++|++++...  ++++++||+++||+...
T Consensus       165 K~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~  195 (362)
T 3sxp_A          165 KLCMDEFVLSHSNDNVQVGLRYFNVYGPREF  195 (362)
T ss_dssp             HHHHHHHHHHTTTTSCEEEEEECSEESTTCG
T ss_pred             HHHHHHHHHHHhccCCEEEEEeCceeCcCCC
Confidence            999999998865  88999999999998754

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.94  E-value=2.3e-27  Score=210.82  Aligned_cols=145  Identities=24%  Similarity=0.349  Sum_probs=123.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      ....+|+||||||+||||++|++.|+++|++|++++|+.+.       .+++++.+|++|.+.+.++++++|+|||+|+.
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~   87 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF   87 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence            35678899999999999999999999999999999998654       36789999999999999999999999999985


Q ss_pred             CCC-----ccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC---------------CCCCCcHHHHHHHHHHHHH---
Q 024290          159 RPE-----EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD---------------KHPEVPLMEIKYCTEQFLQ---  215 (269)
Q Consensus       159 ~~~-----~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~---------------~~~~~~y~~sK~~~e~~~~---  215 (269)
                      ...     +..+++|+.++.+++++|++.++++|||+||..+.               ..+..+|+.+|.++|++++   
T Consensus        88 ~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~  167 (347)
T 4id9_A           88 MSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQ  167 (347)
T ss_dssp             CCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             cCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence            332     45678999999999999999999999999996542               2355679999999999885   


Q ss_pred             -hcCCCEEEEEcCccc
Q 024290          216 -DSGLPHVIIRLWPYW  230 (269)
Q Consensus       216 -~~gi~~~ilrp~~i~  230 (269)
                       +.+++++++||+++|
T Consensus       168 ~~~~~~~~ilRp~~v~  183 (347)
T 4id9_A          168 RSGAMETVILRFSHTQ  183 (347)
T ss_dssp             HHSSSEEEEEEECEEE
T ss_pred             HhcCCceEEEccceEe
Confidence             479999999999999

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.94  E-value=2.4e-27  Score=205.53  Aligned_cols=147  Identities=18%  Similarity=0.234  Sum_probs=124.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcC-ccEEEEcCCC-
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG-VHTVIDCATG-  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~-~d~vi~~ag~-  158 (269)
                      |++|+||||| +||||++|++.|+++|++|++++|+.+..     ..+++++.+|++|.+.+.+++++ +|+|||+|+. 
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~   74 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAAS   74 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHH
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCC
Confidence            4567999999 59999999999999999999999986653     24789999999999999999987 9999999984 


Q ss_pred             -CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHHHHHHHHhcCCCEEEE
Q 024290          159 -RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQDSGLPHVII  224 (269)
Q Consensus       159 -~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~~e~~~~~~gi~~~il  224 (269)
                       ..++..+++|+.++.+++++|++.++++|||+||..+.             ..|.++|+.+|.+.|++ ++. ++++++
T Consensus        75 ~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~~il  152 (286)
T 3gpi_A           75 EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSSTIL  152 (286)
T ss_dssp             HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SSEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCeEEE
Confidence             34566778999999999999999999999999997541             22456899999999999 777 999999


Q ss_pred             EcCcccccCcc
Q 024290          225 RLWPYWAICST  235 (269)
Q Consensus       225 rp~~i~g~~~~  235 (269)
                      ||+++||+...
T Consensus       153 R~~~v~G~~~~  163 (286)
T 3gpi_A          153 RFSGIYGPGRL  163 (286)
T ss_dssp             EECEEEBTTBC
T ss_pred             ecccccCCCch
Confidence            99999999765

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=7.3e-27  Score=201.01  Aligned_cols=149  Identities=22%  Similarity=0.232  Sum_probs=129.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC-
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR-  159 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~-  159 (269)
                      |+||+|+||||+|+||+++++.|+++|++|++++|++.+..    ..+++++.+|++|.+++.++++++|+||||||.. 
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~   76 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISV   76 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcC
Confidence            45689999999999999999999999999999999865433    3468899999999999999999999999999953 


Q ss_pred             --CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC--------------CCCCCcHHHHHHHHHHHHH----hcCC
Q 024290          160 --PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--------------KHPEVPLMEIKYCTEQFLQ----DSGL  219 (269)
Q Consensus       160 --~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~--------------~~~~~~y~~sK~~~e~~~~----~~gi  219 (269)
                        +++.++++|+.++.++++++++.++++|||+||..+.              ..+...|+.+|.+.|.+++    +.++
T Consensus        77 ~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~g~  156 (267)
T 3rft_A           77 EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQ  156 (267)
T ss_dssp             CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCC
Confidence              3456778999999999999999999999999996432              2345779999999998875    5799


Q ss_pred             CEEEEEcCcccccC
Q 024290          220 PHVIIRLWPYWAIC  233 (269)
Q Consensus       220 ~~~ilrp~~i~g~~  233 (269)
                      ++++|||+.++++.
T Consensus       157 ~~~~vr~~~v~~~~  170 (267)
T 3rft_A          157 ETALVRIGSCTPEP  170 (267)
T ss_dssp             CEEEEEECBCSSSC
T ss_pred             eEEEEEeecccCCC
Confidence            99999999999864

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=2.9e-26  Score=191.56  Aligned_cols=143  Identities=14%  Similarity=0.140  Sum_probs=123.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHH-HCCCeEEEEeCCCC-CCcccc-ccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRAL-DEGYDVRCLVRPRP-APADFL-RDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll-~~G~~V~~~~R~~~-~~~~~~-~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ++||+|+||||+|+||+++++.|+ ++|++|++++|+++ +..++. ...+++++.+|++|++++.++++++|+||||+|
T Consensus         3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag   82 (221)
T 3r6d_A            3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM   82 (221)
T ss_dssp             CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred             ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence            345779999999999999999999 89999999999866 444321 345789999999999999999999999999998


Q ss_pred             CCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCC------------cHHHHHHHHHHHHHhcCCCEEEEE
Q 024290          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEV------------PLMEIKYCTEQFLQDSGLPHVIIR  225 (269)
Q Consensus       158 ~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~------------~y~~sK~~~e~~~~~~gi~~~ilr  225 (269)
                      ..        |+. ++++++++++.++++||++||..+......            +|+.+|.++|+++++.++++++||
T Consensus        83 ~~--------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vr  153 (221)
T 3r6d_A           83 ES--------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILR  153 (221)
T ss_dssp             CC--------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred             CC--------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEe
Confidence            43        455 899999999999999999999876443221            799999999999999999999999


Q ss_pred             cCccccc
Q 024290          226 LWPYWAI  232 (269)
Q Consensus       226 p~~i~g~  232 (269)
                      ||+++++
T Consensus       154 pg~v~~~  160 (221)
T 3r6d_A          154 LTWLYND  160 (221)
T ss_dssp             ECEEECC
T ss_pred             chhhcCC
Confidence            9999987

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.94  E-value=1e-26  Score=202.85  Aligned_cols=152  Identities=22%  Similarity=0.308  Sum_probs=127.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCc-cccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPA-DFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~-~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      +|+|+||||||+||+++++.|+++| ++|++++|++++.. +.+...+++++.+|++|++++.++++++|+|||+++...
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   84 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE   84 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence            5789999999999999999999999 99999999865531 223345799999999999999999999999999998321


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC----CCCCCCcHHHHHHHHHHHHHhcCCCEEEEEcCcccccCcc
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC----DKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~----~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g~~~~  235 (269)
                      . ...+.|+.++.++++++++.|+++||++|+.+.    +..+..+|+.+|.++|+++++.|+++++|||+++||++..
T Consensus        85 ~-~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~~~~~~~~  162 (299)
T 2wm3_A           85 S-CSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLS  162 (299)
T ss_dssp             H-TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHHHTCCEEEEECCEEGGGGGT
T ss_pred             c-ccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHHCCCCEEEEeecHHhhhchh
Confidence            1 123467889999999999999999999887653    2233578999999999999999999999999999998654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.94  E-value=6.5e-27  Score=210.71  Aligned_cols=154  Identities=17%  Similarity=0.171  Sum_probs=130.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccc-cCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~-~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      +.+|+||||||+||||++|++.|+++| ++|++++|+.+...+.+. ..+++++.+|++|++.+.++++++|+|||||+.
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~  109 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATY  109 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCC
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCc
Confidence            567899999999999999999999999 999999997655433332 347889999999999999999999999999995


Q ss_pred             C-------CCccchhhcHHHHHHHHHHHHHc-CCCeEEEecccCC------------CC-------CCCCcHHHHHHHHH
Q 024290          159 R-------PEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNC------------DK-------HPEVPLMEIKYCTE  211 (269)
Q Consensus       159 ~-------~~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~~------------~~-------~~~~~y~~sK~~~e  211 (269)
                      .       .+...+++|+.++.+++++|++. ++++|||+||..+            +.       .+..+|+.+|.++|
T Consensus       110 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E  189 (377)
T 2q1s_A          110 HGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGE  189 (377)
T ss_dssp             SCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHH
T ss_pred             cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHH
Confidence            4       23456789999999999999998 8999999999753            11       34568999999999


Q ss_pred             HHHHh----cCCCEEEEEcCcccccCc
Q 024290          212 QFLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      ++++.    .+++++++||+++||+..
T Consensus       190 ~~~~~~~~~~gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          190 FYSVYYHKQHQLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred             HHHHHHHHHhCCCEEEEeeccEECCCC
Confidence            98864    599999999999999875

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.94  E-value=1.2e-26  Score=193.00  Aligned_cols=144  Identities=15%  Similarity=0.137  Sum_probs=120.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCCcc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~  163 (269)
                      |+|+||||+|+||+++++.|+++|++|++++|++++.....  .+++++.+|++|++.  +.++++|+||||+|....  
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~--   74 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPD--   74 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTT--
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhh--hhhcCCCEEEECCcCCcc--
Confidence            57999999999999999999999999999999865543322  579999999999988  788999999999996432  


Q ss_pred             chhhcHHHHHHHHHHHHHcCCCeEEEecccCCC--------------CCCCCcHHHHHHHHHHH--HH--hcCCCEEEEE
Q 024290          164 IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--------------KHPEVPLMEIKYCTEQF--LQ--DSGLPHVIIR  225 (269)
Q Consensus       164 ~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~--------------~~~~~~y~~sK~~~e~~--~~--~~gi~~~ilr  225 (269)
                      ..+.|+.++.++++++++.++++||++||.+..              ..+...|+.+|...|.+  ++  +.+++++++|
T Consensus        75 ~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivr  154 (221)
T 3ew7_A           75 EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYIS  154 (221)
T ss_dssp             TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEE
T ss_pred             ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCccEEEEe
Confidence            356799999999999999999999999997541              12345688899988876  66  6899999999


Q ss_pred             cCcccccC
Q 024290          226 LWPYWAIC  233 (269)
Q Consensus       226 p~~i~g~~  233 (269)
                      |+++||+.
T Consensus       155 p~~v~g~~  162 (221)
T 3ew7_A          155 PSAMFEPG  162 (221)
T ss_dssp             CSSCCCCC
T ss_pred             CcceecCC
Confidence            99999983

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.94  E-value=4.6e-26  Score=201.72  Aligned_cols=151  Identities=17%  Similarity=0.147  Sum_probs=126.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC----
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG----  158 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~----  158 (269)
                      +|+||||||+||||++|+++|+++|++|++++|+++...+ +...+++++.+|++|.+++.++++++|+|||+|+.    
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~   91 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-LAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSR   91 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG-GGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh-hccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCC
Confidence            3589999999999999999999999999999998665433 33347899999999999999999999999999984    


Q ss_pred             -CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC--C------------C----CCcHHHHHHHHHHHHHh---
Q 024290          159 -RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--H------------P----EVPLMEIKYCTEQFLQD---  216 (269)
Q Consensus       159 -~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~--~------------~----~~~y~~sK~~~e~~~~~---  216 (269)
                       ..++..+++|+.++.+++++|++.++++|||+||..+..  .            |    ..+|+.+|.++|++++.   
T Consensus        92 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~  171 (342)
T 2x4g_A           92 PRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR  171 (342)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh
Confidence             234567789999999999999999999999999976421  1            2    56899999999998865   


Q ss_pred             cCCCEEEEEcCcccccCc
Q 024290          217 SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 ~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++++++||+++||+..
T Consensus       172 ~g~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          172 NGLPVVIGIPGMVLGELD  189 (342)
T ss_dssp             TTCCEEEEEECEEECSCC
T ss_pred             cCCcEEEEeCCceECCCC
Confidence            389999999999999865

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.94  E-value=3.1e-27  Score=210.91  Aligned_cols=154  Identities=16%  Similarity=0.160  Sum_probs=128.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHhcC--ccEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLVG--VHTVID  154 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~~--~d~vi~  154 (269)
                      |.+|+||||||+||||++|+++|+++|++|++++|+.+.......    ..+++++.+|++|++++.+++++  +|+|||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   86 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   86 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence            567899999999999999999999999999999998665433221    23689999999999999999876  899999


Q ss_pred             cCCCC-------CCccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCC--------------CCCCCCcHHHHHHHHHH
Q 024290          155 CATGR-------PEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNC--------------DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       155 ~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~--------------~~~~~~~y~~sK~~~e~  212 (269)
                      ||+..       .+...+++|+.++.++++++++.+ +++|||+||..+              +..+..+|+.+|.++|+
T Consensus        87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  166 (357)
T 1rkx_A           87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAEL  166 (357)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHH
T ss_pred             CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHH
Confidence            99942       234567799999999999999886 889999999752              12345679999999999


Q ss_pred             HHHhc-------------CCCEEEEEcCcccccCc
Q 024290          213 FLQDS-------------GLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~~-------------gi~~~ilrp~~i~g~~~  234 (269)
                      +++..             +++++++||+++||+..
T Consensus       167 ~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~  201 (357)
T 1rkx_A          167 VTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD  201 (357)
T ss_dssp             HHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred             HHHHHHHHHhhhhccccCCceEEEEeeceeeCCCC
Confidence            88542             99999999999999864

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.94  E-value=2.5e-26  Score=191.81  Aligned_cols=146  Identities=18%  Similarity=0.101  Sum_probs=122.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCCcc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP  163 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~  163 (269)
                      |+|+||||||+||++++++|+++|++|++++|++++..+ +...+++++.+|++|++.  ++++++|+||||+|......
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~   77 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD-RLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSG   77 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSS
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc-ccCCCceEEecccccccH--hhcccCCEEEECCccCCCcc
Confidence            479999999999999999999999999999998654433 233589999999999988  78899999999999754444


Q ss_pred             chhhcHHHHHHHHHHHHHcCCCeEEEecccCCC---CC-------------CCCcHHHHHHHHHHH--H-HhcCCCEEEE
Q 024290          164 IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD---KH-------------PEVPLMEIKYCTEQF--L-QDSGLPHVII  224 (269)
Q Consensus       164 ~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~---~~-------------~~~~y~~sK~~~e~~--~-~~~gi~~~il  224 (269)
                      ..++|+.++.+++++|++.+ ++||++||.+..   ..             +...|+.+|...|.+  + ++.+++++++
T Consensus        78 ~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~i~~~iv  156 (224)
T 3h2s_A           78 RGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGI  156 (224)
T ss_dssp             CTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcCCCcEEEE
Confidence            56789999999999999999 999999986431   11             156799999999865  2 3579999999


Q ss_pred             EcCcccccC
Q 024290          225 RLWPYWAIC  233 (269)
Q Consensus       225 rp~~i~g~~  233 (269)
                      ||+++||+.
T Consensus       157 rp~~v~g~~  165 (224)
T 3h2s_A          157 SPSEAFPSG  165 (224)
T ss_dssp             EECSBCCCC
T ss_pred             cCccccCCC
Confidence            999999984

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.94  E-value=9.1e-27  Score=201.57  Aligned_cols=145  Identities=21%  Similarity=0.365  Sum_probs=127.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~  161 (269)
                      |+|+||||+||||+++++.|+++  |++|++++|++++... +...+++++.+|++|++++.++++++|+|||+++....
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~   79 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-LADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYD   79 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-HHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-HhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcC
Confidence            47999999999999999999999  9999999998665433 33457899999999999999999999999999985322


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEEEEEcCcccccC
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g~~  233 (269)
                         .++|+.++.+++++|++.++++|||+||.++.. ...+|+.+|.++|+++++.+++++++||+.++++.
T Consensus        80 ---~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-~~~~y~~~K~~~E~~~~~~~~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A           80 ---NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE-SIIPLAHVHLATEYAIRTTNIPYTFLRNALYTDFF  147 (287)
T ss_dssp             ---HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG-CCSTHHHHHHHHHHHHHHTTCCEEEEEECCBHHHH
T ss_pred             ---chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-CCCchHHHHHHHHHHHHHcCCCeEEEECCEecccc
Confidence               257899999999999999999999999987643 34589999999999999999999999999999875

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.94  E-value=6.2e-27  Score=207.94  Aligned_cols=155  Identities=17%  Similarity=0.208  Sum_probs=126.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCC-Ccccc----ccCCCEEEEcCCCCCCcHHHHhcC--cc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPA-PADFL----RDWGATVVNADLSKPETIPATLVG--VH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~-~~~~~----~~~~~~~i~~Dl~d~~~l~~~~~~--~d  150 (269)
                      .+.+|+|||||||||||++|+++|+++|  ++|++++|.... ....+    ...+++++.+|++|.+.+.+++++  +|
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  100 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ  100 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence            3567899999999999999999999999  788888876422 21212    224789999999999999999986  99


Q ss_pred             EEEEcCCCC-------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC--------------CCCCCcHHHHHHH
Q 024290          151 TVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--------------KHPEVPLMEIKYC  209 (269)
Q Consensus       151 ~vi~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~--------------~~~~~~y~~sK~~  209 (269)
                      +|||+|+..       .+...+++|+.++.+++++|++.++++|||+||..+.              ..|..+|+.+|.+
T Consensus       101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~  180 (346)
T 4egb_A          101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKAS  180 (346)
T ss_dssp             EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHH
T ss_pred             EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHH
Confidence            999999842       3456778999999999999999999999999997532              1234789999999


Q ss_pred             HHHHHHh----cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      +|++++.    .+++++++||+++||+..
T Consensus       181 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~  209 (346)
T 4egb_A          181 ADMIALAYYKTYQLPVIVTRCSNNYGPYQ  209 (346)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred             HHHHHHHHHHHhCCCEEEEeecceeCcCC
Confidence            9998865    699999999999999865

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.94  E-value=9.6e-27  Score=193.02  Aligned_cols=147  Identities=24%  Similarity=0.268  Sum_probs=130.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|++++     ...+++++.+|++|.+++.+++  +|+||||+|..
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~   76 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTT   76 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----cCCCceEEeccccCHHHHHHhh--hcEEEECeeec
Confidence            457999999999999999999999998  99999998665     1346788899999998888887  99999999953


Q ss_pred             -----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCC-EEEEEcCcccccC
Q 024290          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLP-HVIIRLWPYWAIC  233 (269)
Q Consensus       160 -----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~-~~ilrp~~i~g~~  233 (269)
                           .++.++++|+.++.++++++++.++++||++||..+...+..+|+.+|.++|+++++.+++ ++++||+++||+.
T Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~vrp~~v~g~~  156 (215)
T 2a35_A           77 IKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPR  156 (215)
T ss_dssp             HHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTT
T ss_pred             cccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCccHHHHHHHHHHHHHHHcCCCeEEEEeCceeeCCC
Confidence                 3456678899999999999999999999999999887778889999999999999999999 9999999999986


Q ss_pred             cc
Q 024290          234 ST  235 (269)
Q Consensus       234 ~~  235 (269)
                      ..
T Consensus       157 ~~  158 (215)
T 2a35_A          157 EE  158 (215)
T ss_dssp             SC
T ss_pred             Cc
Confidence            54

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.94  E-value=3.2e-26  Score=193.96  Aligned_cols=153  Identities=25%  Similarity=0.381  Sum_probs=128.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      +++|+|+||||+|+||++++++|+++  |++|++++|++++..+.  ..+++++.+|++|.+++.++++++|+||||+|.
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   79 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--GGEADVFIGDITDADSINPAFQGIDALVILTSA   79 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence            45789999999999999999999999  89999999975443222  236789999999999999999999999999985


Q ss_pred             CC-------------Cc-------cchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC--CCCC-----cHHHHHHHHH
Q 024290          159 RP-------------EE-------PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--HPEV-----PLMEIKYCTE  211 (269)
Q Consensus       159 ~~-------------~~-------~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~--~~~~-----~y~~sK~~~e  211 (269)
                      ..             .+       ..+++|+.++.++++++++.++++||++||..+..  .+..     .|..+|.++|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e  159 (253)
T 1xq6_A           80 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAE  159 (253)
T ss_dssp             CCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHH
T ss_pred             cccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHHHHHHHH
Confidence            32             11       23579999999999999999999999999987532  2222     3667999999


Q ss_pred             HHHHhcCCCEEEEEcCcccccCcc
Q 024290          212 QFLQDSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       212 ~~~~~~gi~~~ilrp~~i~g~~~~  235 (269)
                      .++++.+++++++||+++||+...
T Consensus       160 ~~~~~~~i~~~~vrpg~v~~~~~~  183 (253)
T 1xq6_A          160 QYLADSGTPYTIIRAGGLLDKEGG  183 (253)
T ss_dssp             HHHHTSSSCEEEEEECEEECSCSS
T ss_pred             HHHHhCCCceEEEecceeecCCcc
Confidence            999999999999999999998654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.94  E-value=7.5e-26  Score=204.00  Aligned_cols=154  Identities=20%  Similarity=0.171  Sum_probs=130.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC-
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR-  159 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~-  159 (269)
                      .+||+||||||+||||++|+++|+++|++|++++|+...... ....+++++.+|++|.+++.++++++|+|||||+.. 
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~  105 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMG  105 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchh-hccCCceEEECCCCCHHHHHHHhCCCCEEEECceecC
Confidence            457899999999999999999999999999999998655332 223478999999999999999999999999999843 


Q ss_pred             -------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC--------------------CCCCCcHHHHHHHHHH
Q 024290          160 -------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--------------------KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       160 -------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~--------------------~~~~~~y~~sK~~~e~  212 (269)
                             .++..+++|+.++.++++++++.++++|||+||..+.                    ..+..+|+.+|.++|+
T Consensus       106 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~  185 (379)
T 2c5a_A          106 GMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEE  185 (379)
T ss_dssp             CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHH
T ss_pred             cccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHH
Confidence                   2345677899999999999999999999999997542                    2345679999999998


Q ss_pred             HHHh----cCCCEEEEEcCcccccCcc
Q 024290          213 FLQD----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       213 ~~~~----~gi~~~ilrp~~i~g~~~~  235 (269)
                      +++.    .+++++++||+++||+...
T Consensus       186 ~~~~~~~~~gi~~~ilrp~~v~G~~~~  212 (379)
T 2c5a_A          186 LCKHYNKDFGIECRIGRFHNIYGPFGT  212 (379)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred             HHHHHHHHHCCCEEEEEeCceeCcCCC
Confidence            8753    6999999999999998654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.94  E-value=1.8e-26  Score=202.05  Aligned_cols=149  Identities=18%  Similarity=0.203  Sum_probs=126.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC----
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR----  159 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~----  159 (269)
                      |+||||||+||||++|++.|+++|++|++++|+.+...+.. ..+++++.+|+.|.+ +.+++++ |+|||||+..    
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~   77 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-NPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRL   77 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-CTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-CCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchh
Confidence            58999999999999999999999999999999766544332 457899999999998 8888888 9999999842    


Q ss_pred             ---CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHHHHHHHHh----cCC
Q 024290          160 ---PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQD----SGL  219 (269)
Q Consensus       160 ---~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~~e~~~~~----~gi  219 (269)
                         .+...+++|+.++.++++++++.++++|||+||..+.             ..+.++|+.+|.+.|++++.    .++
T Consensus        78 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~  157 (312)
T 3ko8_A           78 STTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGV  157 (312)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCC
Confidence               2334567899999999999999999999999997531             23457899999999988754    699


Q ss_pred             CEEEEEcCcccccCcc
Q 024290          220 PHVIIRLWPYWAICST  235 (269)
Q Consensus       220 ~~~ilrp~~i~g~~~~  235 (269)
                      +++++||+++||+...
T Consensus       158 ~~~~lrp~~v~g~~~~  173 (312)
T 3ko8_A          158 RCLAVRYANVVGPRLR  173 (312)
T ss_dssp             EEEEEEECEEECTTCC
T ss_pred             CEEEEeeccccCcCCC
Confidence            9999999999998643

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.93  E-value=1e-25  Score=198.76  Aligned_cols=150  Identities=22%  Similarity=0.325  Sum_probs=127.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP  160 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~~  160 (269)
                      ||+||||||+||||++++++|+++|++|++++|+.....+.+.. +++++.+|++|.+.+.++++  ++|+|||+|+...
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~   79 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITE-GAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSL   79 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCT-TSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCC-CcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccC
Confidence            47899999999999999999999999999999975543333322 78999999999999999998  8999999999542


Q ss_pred             -------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC-------------CCCCcHHHHHHHHHHHHHh----
Q 024290          161 -------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQD----  216 (269)
Q Consensus       161 -------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~-------------~~~~~y~~sK~~~e~~~~~----  216 (269)
                             ++..+++|+.++.+++++|++.++++|||+||..+..             .+..+|+.+|.++|++++.    
T Consensus        80 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (330)
T 2c20_A           80 VGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQA  159 (330)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence                   3456779999999999999999999999999975421             2457899999999998864    


Q ss_pred             cCCCEEEEEcCcccccC
Q 024290          217 SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       217 ~gi~~~ilrp~~i~g~~  233 (269)
                      .+++++++||+++||+.
T Consensus       160 ~~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          160 SNLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             SSCEEEEEECSEEECCC
T ss_pred             hCCcEEEEecCcccCCC
Confidence            58999999999999985

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.93  E-value=4.1e-26  Score=200.09  Aligned_cols=150  Identities=21%  Similarity=0.297  Sum_probs=122.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC----
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG----  158 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~----  158 (269)
                      ||+||||||+||||++|++.|+++| +++++++......+.+ ..+++++.+|++| +++.++++++|+|||+|+.    
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~   77 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-NEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVR   77 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-CTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-CCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChh
Confidence            4689999999999999999999999 5555555443332222 3468899999999 9999999999999999983    


Q ss_pred             ---CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-------------CCCCCCcHHHHHHHHHHHHHh----cC
Q 024290          159 ---RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------------DKHPEVPLMEIKYCTEQFLQD----SG  218 (269)
Q Consensus       159 ---~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-------------~~~~~~~y~~sK~~~e~~~~~----~g  218 (269)
                         ..+...+++|+.++.++++++++.++++|||+||..+             +..+..+|+.+|.++|.+++.    .+
T Consensus        78 ~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g  157 (313)
T 3ehe_A           78 IGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFD  157 (313)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence               2234567899999999999999999999999999754             223456799999999988754    69


Q ss_pred             CCEEEEEcCcccccCcc
Q 024290          219 LPHVIIRLWPYWAICST  235 (269)
Q Consensus       219 i~~~ilrp~~i~g~~~~  235 (269)
                      ++++++||+++||+...
T Consensus       158 ~~~~ilRp~~v~G~~~~  174 (313)
T 3ehe_A          158 MQAWIYRFANVIGRRST  174 (313)
T ss_dssp             CEEEEEECSCEESTTCC
T ss_pred             CCEEEEeeccccCcCCC
Confidence            99999999999998654

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=4.2e-26  Score=202.06  Aligned_cols=153  Identities=17%  Similarity=0.227  Sum_probs=128.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCCCCCCcHHHHhc--CccEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV--GVHTVI  153 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi  153 (269)
                      ++|+||||||+||||+++++.|+++|++|++++|+.+...+...      ..+++++.+|++|++++.++++  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            45799999999999999999999999999999998665443221      2378999999999999999997  899999


Q ss_pred             EcCCCCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHHHHHH
Q 024290          154 DCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       154 ~~ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~~e~~  213 (269)
                      |||+...       ....+++|+.++.++++++++.++++|||+||..+.             ..+..+|+.+|.++|++
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  163 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQI  163 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHH
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence            9999542       235667899999999999999999999999996532             12346899999999998


Q ss_pred             HHh----c-CCCEEEEEcCcccccCc
Q 024290          214 LQD----S-GLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~~----~-gi~~~ilrp~~i~g~~~  234 (269)
                      ++.    . +++++++||+++||+..
T Consensus       164 ~~~~~~~~~~~~~~~lRp~~v~G~~~  189 (341)
T 3enk_A          164 LRDVEAADPSWRVATLRYFNPVGAHE  189 (341)
T ss_dssp             HHHHHHHCTTCEEEEEEECEEECCCT
T ss_pred             HHHHhhcCCCceEEEEeeccccCCcc
Confidence            864    3 59999999999999854

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.93  E-value=1.4e-25  Score=198.74  Aligned_cols=153  Identities=17%  Similarity=0.225  Sum_probs=128.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHHhcC--ccEEEEcC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLVG--VHTVIDCA  156 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~~~--~d~vi~~a  156 (269)
                      .+.||+||||||+||||++|+++|+++|++|++++|+.....+.+.. .+++++.+|++|.+++.+++++  +|+|||||
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   97 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA   97 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence            46678999999999999999999999999999999976543333332 3688999999999999999987  99999999


Q ss_pred             CCCCC---cc-chhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC--------------CCC-CcHHHHHHHHHHHHHh-
Q 024290          157 TGRPE---EP-IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------HPE-VPLMEIKYCTEQFLQD-  216 (269)
Q Consensus       157 g~~~~---~~-~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~--------------~~~-~~y~~sK~~~e~~~~~-  216 (269)
                      +....   .. .+++|+.++.++++++++.++++|||+||..+..              .+. .+|+.+|.++|++++. 
T Consensus        98 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s  177 (333)
T 2q1w_A           98 ASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYS  177 (333)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHH
T ss_pred             eecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhh
Confidence            95432   11 1678999999999999999999999999976533              455 7899999999999988 


Q ss_pred             cCCCEEEEEcCcccccC
Q 024290          217 SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       217 ~gi~~~ilrp~~i~g~~  233 (269)
                      .. +++++||+++||+.
T Consensus       178 ~~-~~~ilR~~~v~gp~  193 (333)
T 2q1w_A          178 GL-DFVTFRLANVVGPR  193 (333)
T ss_dssp             TC-CEEEEEESEEESTT
T ss_pred             hC-CeEEEeeceEECcC
Confidence            77 99999999999987

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.93  E-value=1.6e-25  Score=197.96  Aligned_cols=156  Identities=17%  Similarity=0.239  Sum_probs=131.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHHhc--CccEEEEc
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV--GVHTVIDC  155 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~  155 (269)
                      ..+.+|+||||||+||||++|++.|+++|++|++++|+.+...+.+.. .+++++.+|++|.+++.++++  ++|+||||
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~   95 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHS   95 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEEC
Confidence            357788999999999999999999999999999999975543321121 368899999999999999998  99999999


Q ss_pred             CCCCCC---ccc-hhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC-------C------CCCcHHHHHHHHHHHHHhcC
Q 024290          156 ATGRPE---EPI-KKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------H------PEVPLMEIKYCTEQFLQDSG  218 (269)
Q Consensus       156 ag~~~~---~~~-~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~-------~------~~~~y~~sK~~~e~~~~~~g  218 (269)
                      ||....   +.. +++|+.++.++++++.+.++++|||+||..+..       .      +..+|+.+|.++|++++..+
T Consensus        96 A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~~  175 (330)
T 2pzm_A           96 AAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSD  175 (330)
T ss_dssp             CCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTCS
T ss_pred             CccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHcC
Confidence            995432   111 678999999999999999999999999975421       1      56789999999999999999


Q ss_pred             CCEEEEEcCcccccCc
Q 024290          219 LPHVIIRLWPYWAICS  234 (269)
Q Consensus       219 i~~~ilrp~~i~g~~~  234 (269)
                      ++++++||+++||+..
T Consensus       176 ~~~~~iR~~~v~gp~~  191 (330)
T 2pzm_A          176 VPVVSLRLANVTGPRL  191 (330)
T ss_dssp             SCEEEEEECEEECTTC
T ss_pred             CCEEEEeeeeeECcCC
Confidence            9999999999999874

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.93  E-value=1.1e-26  Score=207.16  Aligned_cols=154  Identities=19%  Similarity=0.262  Sum_probs=131.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-CC-eEEEEeCCCCCCccc---cccCCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDE-GY-DVRCLVRPRPAPADF---LRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~-G~-~V~~~~R~~~~~~~~---~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      +++|+||||||+|+||++++++|+++ |+ +|++++|++.+....   +...+++++.+|++|.+.+.++++++|+|||+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~   98 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA   98 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence            67899999999999999999999999 97 999999975433221   22347889999999999999999999999999


Q ss_pred             CCCCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHh-------cCCCE
Q 024290          156 ATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQD-------SGLPH  221 (269)
Q Consensus       156 ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~-------~gi~~  221 (269)
                      |+...       +...+++|+.++.++++++.+.++++||++||... ..|.++|+.+|.++|++++.       .++++
T Consensus        99 Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~-~~p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~  177 (344)
T 2gn4_A           99 AALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKA-ANPINLYGATKLCSDKLFVSANNFKGSSQTQF  177 (344)
T ss_dssp             CCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGG-SSCCSHHHHHHHHHHHHHHHGGGCCCSSCCEE
T ss_pred             CCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCcc-CCCccHHHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence            98532       34567899999999999999999999999999764 34678999999999999865       46999


Q ss_pred             EEEEcCcccccCcc
Q 024290          222 VIIRLWPYWAICST  235 (269)
Q Consensus       222 ~ilrp~~i~g~~~~  235 (269)
                      +++|||++||+...
T Consensus       178 ~~vRpg~v~g~~~~  191 (344)
T 2gn4_A          178 SVVRYGNVVGSRGS  191 (344)
T ss_dssp             EEECCCEETTCTTS
T ss_pred             EEEEeccEECCCCC
Confidence            99999999998643

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.93  E-value=9.2e-26  Score=201.09  Aligned_cols=155  Identities=15%  Similarity=0.223  Sum_probs=130.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----------cCCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----------DWGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----------~~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      +.+|+||||||+||||++|++.|+++|++|++++|+.....+.+.          ..+++++.+|++|.+++.++++++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            567899999999999999999999999999999997543221111          2478899999999999999999999


Q ss_pred             EEEEcCCCC-------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC-------------CCCCcHHHHHHHH
Q 024290          151 TVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCT  210 (269)
Q Consensus       151 ~vi~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~-------------~~~~~y~~sK~~~  210 (269)
                      +|||||+..       .++..+++|+.++.++++++++.++++|||+||..+..             .+..+|+.+|.++
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~  184 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  184 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence            999999953       23456779999999999999999999999999975421             2457899999999


Q ss_pred             HHHHHh----cCCCEEEEEcCcccccCcc
Q 024290          211 EQFLQD----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       211 e~~~~~----~gi~~~ilrp~~i~g~~~~  235 (269)
                      |++++.    .+++++++||+++||+...
T Consensus       185 e~~~~~~~~~~g~~~~ilRp~~v~G~~~~  213 (352)
T 1sb8_A          185 ELYADVFSRCYGFSTIGLRYFNVFGRRQD  213 (352)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECCEECTTCC
T ss_pred             HHHHHHHHHHcCCCEEEEEECceeCcCCC
Confidence            998853    5999999999999998653

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.93  E-value=1.4e-25  Score=197.01  Aligned_cols=149  Identities=10%  Similarity=0.107  Sum_probs=126.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcC--ccEEEEcCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG--VHTVIDCATGR  159 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~--~d~vi~~ag~~  159 (269)
                      .+|+||||||+||||++|++.|+++|++|++++|+... ..    .+++++.+|++|++.+.+++++  +|+|||||+..
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~   85 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKS   85 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCccc
Confidence            45789999999999999999999999999999998654 22    2788999999999999999875  99999999953


Q ss_pred             -------CCccchhhcHHHHHHHHHHHHHc-CCCeEEEecccCCCC---------------CCCCcHHHHHHHHHHHHHh
Q 024290          160 -------PEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCDK---------------HPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       160 -------~~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~~~~---------------~~~~~y~~sK~~~e~~~~~  216 (269)
                             .++..+++|+.++.++++++++. ++++|||+||..+..               .+..+|+.+|.++|.+++.
T Consensus        86 ~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  165 (321)
T 2pk3_A           86 SVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQ  165 (321)
T ss_dssp             CHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHH
T ss_pred             chhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence                   34557789999999999999876 689999999975321               3457899999999998865


Q ss_pred             ----cCCCEEEEEcCcccccCcc
Q 024290          217 ----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       217 ----~gi~~~ilrp~~i~g~~~~  235 (269)
                          .|++++++||+++||+...
T Consensus       166 ~~~~~gi~~~ilrp~~v~g~~~~  188 (321)
T 2pk3_A          166 YVKAYGMDIIHTRTFNHIGPGQS  188 (321)
T ss_dssp             HHHHHCCEEEEEEECEEECTTCC
T ss_pred             HHHHcCCCEEEEEeCcccCcCCC
Confidence                3999999999999998754

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.93  E-value=2.8e-25  Score=196.73  Aligned_cols=155  Identities=22%  Similarity=0.252  Sum_probs=123.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc---c--cc--cCCCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---F--LR--DWGATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~---~--~~--~~~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      .++|+||||||+||||++|+++|+++|++|++++|+.+...+   .  +.  ..+++++++|++|.+++.++++++|+||
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   82 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVF   82 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence            356899999999999999999999999999999997653211   0  11  1147889999999999999999999999


Q ss_pred             EcCCCCCC------ccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCC-CC-----------------------CCCCc
Q 024290          154 DCATGRPE------EPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNC-DK-----------------------HPEVP  202 (269)
Q Consensus       154 ~~ag~~~~------~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~-~~-----------------------~~~~~  202 (269)
                      |+|+....      ..++++|+.++.+++++|++.+ +++|||+||..+ ..                       .+..+
T Consensus        83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  162 (337)
T 2c29_D           83 HVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWM  162 (337)
T ss_dssp             ECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHH
T ss_pred             EeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccch
Confidence            99984321      1367789999999999999887 899999999752 10                       02236


Q ss_pred             HHHHHHHHHHHHH----hcCCCEEEEEcCcccccCcc
Q 024290          203 LMEIKYCTEQFLQ----DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       203 y~~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~~  235 (269)
                      |+.+|.+.|.++.    +.|++++++||+++||+...
T Consensus       163 Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~  199 (337)
T 2c29_D          163 YFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIM  199 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSC
T ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence            9999999998763    46999999999999999643

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.93  E-value=2.5e-25  Score=196.65  Aligned_cols=154  Identities=18%  Similarity=0.240  Sum_probs=126.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCC-Cccccc----cCCCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPA-PADFLR----DWGATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~-~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      |++|+||||||+||||++++++|+++|  ++|++++|.... ..+.+.    ..+++++.+|++|.+.+.+++.++|+||
T Consensus         1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   80 (336)
T 2hun_A            1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVV   80 (336)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEE
Confidence            345789999999999999999999986  899999996421 111111    2368899999999999999999999999


Q ss_pred             EcCCCC-------CCccchhhcHHHHHHHHHHHHHcCC-CeEEEecccCC-------------CCCCCCcHHHHHHHHHH
Q 024290          154 DCATGR-------PEEPIKKVDWEGKVALIQCAKAMGI-QKYVFYSIHNC-------------DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       154 ~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v-~r~V~~SS~~~-------------~~~~~~~y~~sK~~~e~  212 (269)
                      |||+..       .++.++++|+.++.++++++.+.+. ++|||+||..+             +..+..+|+.+|.++|+
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (336)
T 2hun_A           81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDM  160 (336)
T ss_dssp             ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHH
Confidence            999953       3456778999999999999998875 69999999643             12345689999999999


Q ss_pred             HHHh----cCCCEEEEEcCcccccCc
Q 024290          213 FLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.    .+++++++||+++||+..
T Consensus       161 ~~~~~~~~~~~~~~ilrp~~v~g~~~  186 (336)
T 2hun_A          161 LVLGWTRTYNLNASITRCTNNYGPYQ  186 (336)
T ss_dssp             HHHHHHHHTTCEEEEEEECEEESTTC
T ss_pred             HHHHHHHHhCCCEEEEeeeeeeCcCC
Confidence            8754    699999999999999875

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.93  E-value=1.9e-25  Score=197.68  Aligned_cols=153  Identities=19%  Similarity=0.197  Sum_probs=122.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc-----ccc-cCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD-----FLR-DWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~-----~~~-~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      +|+||||||+||||++|+++|+++|++|++++|+.+...+     .+. ..+++++++|++|++.+.++++++|+|||+|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   88 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA   88 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence            6899999999999999999999999999999997654221     111 2357889999999999999999999999999


Q ss_pred             CCCC-----C-ccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCC------CC--------C--------C----CCcH
Q 024290          157 TGRP-----E-EPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNC------DK--------H--------P----EVPL  203 (269)
Q Consensus       157 g~~~-----~-~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~------~~--------~--------~----~~~y  203 (269)
                      +...     + +.++++|+.++.+++++|++.+ +++|||+||..+      ..        .        +    ..+|
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  168 (338)
T 2rh8_A           89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY  168 (338)
T ss_dssp             SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred             CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence            8421     1 2377899999999999999986 899999998641      00        0        1    1159


Q ss_pred             HHHHHHHHHHHH----hcCCCEEEEEcCcccccCcc
Q 024290          204 MEIKYCTEQFLQ----DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       204 ~~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+|...|++++    +.|++++++||+++||+...
T Consensus       169 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~  204 (338)
T 2rh8_A          169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLT  204 (338)
T ss_dssp             TTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSS
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence            999999998764    36999999999999999653

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.93  E-value=1.4e-25  Score=199.68  Aligned_cols=146  Identities=25%  Similarity=0.362  Sum_probs=122.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc------ccccCCCEEEEcCCCCCCcHHHHhc--CccEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD------FLRDWGATVVNADLSKPETIPATLV--GVHTV  152 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~v  152 (269)
                      |.+|+|+||||||+||++|++.|+++|++|++++|+......      .+...+++++.+|++|.+++.++++  ++|+|
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V   87 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV   87 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence            556799999999999999999999999999999997633211      1234689999999999999999999  99999


Q ss_pred             EEcCCCCCCccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCCC------CCCCCcHHHHHHHHHHHHHhcCCCEEEEE
Q 024290          153 IDCATGRPEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCD------KHPEVPLMEIKYCTEQFLQDSGLPHVIIR  225 (269)
Q Consensus       153 i~~ag~~~~~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~~------~~~~~~y~~sK~~~e~~~~~~gi~~~ilr  225 (269)
                      ||+++.        .|+.++.+++++|++.| +++||+ |+.+..      ..+..+|+.+|..+|+++++.+++++++|
T Consensus        88 i~~a~~--------~n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivr  158 (346)
T 3i6i_A           88 VSTVGG--------ESILDQIALVKAMKAVGTIKRFLP-SEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYIC  158 (346)
T ss_dssp             EECCCG--------GGGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEE
T ss_pred             EECCch--------hhHHHHHHHHHHHHHcCCceEEee-cccCCCCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEE
Confidence            999984        37888999999999999 999997 554432      13345799999999999999999999999


Q ss_pred             cCcccccCcc
Q 024290          226 LWPYWAICST  235 (269)
Q Consensus       226 p~~i~g~~~~  235 (269)
                      ||+++|++..
T Consensus       159 pg~~~g~~~~  168 (346)
T 3i6i_A          159 CNSIASWPYY  168 (346)
T ss_dssp             CCEESSCCCS
T ss_pred             ecccccccCc
Confidence            9999997644

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.93  E-value=4.5e-25  Score=195.92  Aligned_cols=151  Identities=16%  Similarity=0.246  Sum_probs=126.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCCCC-Cccc---cccCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPA-PADF---LRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~--G~~V~~~~R~~~~-~~~~---~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      ||+||||||+||||++|+++|+++  |++|++++|+... ..+.   +...+++++.+|++|++.+.++++++|+|||||
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   83 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence            579999999999999999999998  8999999996532 1111   122468899999999999999999999999999


Q ss_pred             CCC-------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------------------CCCCCcHH
Q 024290          157 TGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------------------KHPEVPLM  204 (269)
Q Consensus       157 g~~-------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------------------~~~~~~y~  204 (269)
                      +..       .++..+++|+.++.++++++.+.++ +|||+||..+.                         ..+..+|+
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~  162 (348)
T 1oc2_A           84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  162 (348)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccH
Confidence            953       3456778999999999999999888 99999986421                         13456799


Q ss_pred             HHHHHHHHHHHh----cCCCEEEEEcCcccccCc
Q 024290          205 EIKYCTEQFLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       205 ~sK~~~e~~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      .+|.++|.+++.    .+++++++||+++||+..
T Consensus       163 ~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~  196 (348)
T 1oc2_A          163 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQ  196 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTC
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCC
Confidence            999999998754    599999999999999875

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.92  E-value=1.6e-25  Score=194.12  Aligned_cols=149  Identities=19%  Similarity=0.195  Sum_probs=125.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCCc
Q 024290           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE  162 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~  162 (269)
                      |+|+||||||+||+++++.|+++ |++|++++|++++... +...+++++.+|++|++++.++++++|+||||++.... 
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~-   78 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-DWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP-   78 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-GGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCS-
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-hhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc-
Confidence            47999999999999999999998 9999999998765443 34568999999999999999999999999999985433 


Q ss_pred             cchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEEEEEcCcccccCccc
Q 024290          163 PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       163 ~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g~~~~~  236 (269)
                        ...|+.++.+++++|++.|+++|||+||.+........+...+...|+.+++.+++++++||+++||++..+
T Consensus        79 --~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~~~~~~~~~~~~e~~~~~~g~~~~ilrp~~~~~~~~~~  150 (289)
T 3e48_A           79 --SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSPYFGYASRLLSTSGIDYTYVRMAMYMDPLKPY  150 (289)
T ss_dssp             --HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTCCSTTHHHHHHHHHHHHHHCCEEEEEEECEESTTHHHH
T ss_pred             --chhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCCCCccchhHHHHHHHHHHcCCCEEEEeccccccccHHH
Confidence              235789999999999999999999999976544433444555668888999999999999999999986543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.92  E-value=1.8e-25  Score=198.07  Aligned_cols=151  Identities=19%  Similarity=0.247  Sum_probs=124.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCCCC-CcHHHHhcCccEEEEcCCCCC-
Q 024290           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKP-ETIPATLVGVHTVIDCATGRP-  160 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~-~~l~~~~~~~d~vi~~ag~~~-  160 (269)
                      |+||||||+||||++++++|+++ |++|++++|+.++........+++++.+|++|. +.+.++++++|+|||||+... 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~   80 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence            58999999999999999999998 899999999876554444445789999999985 468888889999999998532 


Q ss_pred             ------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC--------------------CCCCcHHHHHHHHHHHH
Q 024290          161 ------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------------HPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       161 ------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~--------------------~~~~~y~~sK~~~e~~~  214 (269)
                            +...+++|+.++.++++++++.+ ++|||+||..+..                    .+.++|+.+|.++|+++
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  159 (345)
T 2bll_A           81 IEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  159 (345)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred             cchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHH
Confidence                  33466789999999999999988 8999999965310                    11227999999999987


Q ss_pred             H----hcCCCEEEEEcCcccccCcc
Q 024290          215 Q----DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       215 ~----~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +    +.+++++++||+++||+...
T Consensus       160 ~~~~~~~~~~~~ilrp~~v~G~~~~  184 (345)
T 2bll_A          160 WAYGEKEGLQFTLFRPFNWMGPRLD  184 (345)
T ss_dssp             HHHHHHHCCCEEEEEECSEECSSCC
T ss_pred             HHHHHhcCCCEEEEcCCcccCCCcc
Confidence            4    46999999999999998753

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.92  E-value=4.2e-25  Score=195.76  Aligned_cols=152  Identities=16%  Similarity=0.205  Sum_probs=124.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-c---cccc-cCCCEEEEcCCCCCCcHHHHhcC--ccEEEEc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-A---DFLR-DWGATVVNADLSKPETIPATLVG--VHTVIDC  155 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~---~~~~-~~~~~~i~~Dl~d~~~l~~~~~~--~d~vi~~  155 (269)
                      ||+||||||+||||++|++.|+++|++|++++|..... .   +.+. ..+++++.+|++|.+++.+++++  +|+||||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            46899999999999999999999999999999853221 1   1111 12588999999999999999987  9999999


Q ss_pred             CCCC-------CCccchhhcHHHHHHHHHHHHHcCCC-eEEEecccCCC-----------------------------CC
Q 024290          156 ATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNCD-----------------------------KH  198 (269)
Q Consensus       156 ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~SS~~~~-----------------------------~~  198 (269)
                      |+..       .++..+++|+.++.++++++++.+++ +|||+||..+.                             ..
T Consensus        81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  160 (347)
T 1orr_A           81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  160 (347)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence            9953       33456789999999999999999886 99999996531                             12


Q ss_pred             CCCcHHHHHHHHHHHHHh----cCCCEEEEEcCcccccCc
Q 024290          199 PEVPLMEIKYCTEQFLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       199 ~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      +..+|+.+|.++|++++.    .+++++++||+++||+..
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~  200 (347)
T 1orr_A          161 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQ  200 (347)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCC
Confidence            445799999999998865    499999999999999864

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.92  E-value=3e-25  Score=196.18  Aligned_cols=156  Identities=16%  Similarity=0.114  Sum_probs=126.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEE-EcCCCCCCcHHHHhcCccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVV-NADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i-~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      .+++|+||||||+||||+++++.|+++|++|++++|+.+.......      ..+++++ .+|++|.+.+.++++++|+|
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   87 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence            3667899999999999999999999999999999997543221111      1357788 79999999999999999999


Q ss_pred             EEcCCCC----CCccchhhcHHHHHHHHHHHHH-cCCCeEEEecccCCCC-C----------------------------
Q 024290          153 IDCATGR----PEEPIKKVDWEGKVALIQCAKA-MGIQKYVFYSIHNCDK-H----------------------------  198 (269)
Q Consensus       153 i~~ag~~----~~~~~~~~n~~~~~~li~a~~~-~~v~r~V~~SS~~~~~-~----------------------------  198 (269)
                      ||||+..    .+...+++|+.++.++++++++ .++++|||+||..+.. .                            
T Consensus        88 ih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  167 (342)
T 1y1p_A           88 AHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPES  167 (342)
T ss_dssp             EECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTT
T ss_pred             EEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccc
Confidence            9999853    3445678999999999999984 6789999999975421 0                            


Q ss_pred             ----CCCcHHHHHHHHHHHHHhc------CCCEEEEEcCcccccCcc
Q 024290          199 ----PEVPLMEIKYCTEQFLQDS------GLPHVIIRLWPYWAICST  235 (269)
Q Consensus       199 ----~~~~y~~sK~~~e~~~~~~------gi~~~ilrp~~i~g~~~~  235 (269)
                          +.++|+.+|.+.|.+++..      +++++++||+++||+...
T Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~  214 (342)
T 1y1p_A          168 DPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFD  214 (342)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSC
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCC
Confidence                1246999999999987542      788999999999998654

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.92  E-value=1.1e-24  Score=192.87  Aligned_cols=151  Identities=23%  Similarity=0.304  Sum_probs=126.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHC---C---CeEEEEeCCCCC-Cccccc----cCCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDE---G---YDVRCLVRPRPA-PADFLR----DWGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~---G---~~V~~~~R~~~~-~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      |+||||||+||||++|+++|+++   |   ++|++++|+... ..+.+.    ..+++++.+|++|++.+.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            47999999999999999999997   8   999999996431 111111    246889999999999999999999999


Q ss_pred             EEcCCCC-------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-------------CCCCCCcHHHHHHHHHH
Q 024290          153 IDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------------DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       153 i~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-------------~~~~~~~y~~sK~~~e~  212 (269)
                      ||||+..       +++.++++|+.++.++++++++.++++|||+||..+             +..+..+|+.+|.++|+
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHH
Confidence            9999953       345677899999999999999999999999998643             12345789999999999


Q ss_pred             HHHh----cCCCEEEEEcCcccccCc
Q 024290          213 FLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.    .+++++++||+++||+..
T Consensus       161 ~~~~~~~~~g~~~~ilrp~~v~G~~~  186 (337)
T 1r6d_A          161 VARAYHRTYGLDVRITRCCNNYGPYQ  186 (337)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEECTTC
T ss_pred             HHHHHHHHHCCCEEEEEeeeeECCCC
Confidence            8754    699999999999999875

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.92  E-value=4.3e-26  Score=199.43  Aligned_cols=148  Identities=15%  Similarity=0.078  Sum_probs=125.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATG  158 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~  158 (269)
                      +|+||||||+||||++|+++|+++  |++|++++|+.... +..  .+++++.+|++|.+++.++++  ++|+|||+|+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~--~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~   78 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT-DVV--NSGPFEVVNALDFNQIEHLVEVHKITDIYLMAAL   78 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC-HHH--HSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc-ccc--CCCceEEecCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            478999999999999999999999  89999999976542 111  257899999999999999997  89999999985


Q ss_pred             C------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC--------------CCCCCcHHHHHHHHHHHHHh--
Q 024290          159 R------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--------------KHPEVPLMEIKYCTEQFLQD--  216 (269)
Q Consensus       159 ~------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~--------------~~~~~~y~~sK~~~e~~~~~--  216 (269)
                      .      .++..+++|+.++.++++++++.++++|||+||..+.              ..+..+|+.+|.+.|++++.  
T Consensus        79 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~  158 (312)
T 2yy7_A           79 LSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYH  158 (312)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHH
Confidence            3      3345678999999999999999999999999997542              12356799999999988754  


Q ss_pred             --cCCCEEEEEcCcccccC
Q 024290          217 --SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       217 --~gi~~~ilrp~~i~g~~  233 (269)
                        .+++++++||+++||+.
T Consensus       159 ~~~~~~~~~lrp~~v~g~~  177 (312)
T 2yy7_A          159 NIYGVDVRSIRYPGLISWS  177 (312)
T ss_dssp             HHHCCEEECEEECEEECSS
T ss_pred             HhcCCcEEEEeCCeEecCC
Confidence              58999999999999964

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.92  E-value=4.2e-25  Score=193.48  Aligned_cols=151  Identities=23%  Similarity=0.311  Sum_probs=125.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCCC-
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP-  160 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~~-  160 (269)
                      |+||||||+||||++++++|+++|++|++++|......+.+. .+++++.+|++|++++.++++  ++|+|||+|+... 
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   79 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP-KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASV   79 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC-TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc-cCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCc
Confidence            479999999999999999999999999999985433322222 367889999999999999987  8999999998532 


Q ss_pred             ------CccchhhcHHHHHHHHHHHHHcCCCeEEEeccc-CC--C------------CCCCCcHHHHHHHHHHHHH----
Q 024290          161 ------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH-NC--D------------KHPEVPLMEIKYCTEQFLQ----  215 (269)
Q Consensus       161 ------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~-~~--~------------~~~~~~y~~sK~~~e~~~~----  215 (269)
                            +...+++|+.++.++++++++.++++||++||. .+  .            ..+..+|+.+|.++|++++    
T Consensus        80 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  159 (311)
T 2p5y_A           80 KVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQ  159 (311)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence                  345677999999999999999999999999997 21  0            1245689999999999875    


Q ss_pred             hcCCCEEEEEcCcccccCcc
Q 024290          216 DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       216 ~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+++++++||+++||+...
T Consensus       160 ~~~~~~~~lrp~~v~Gp~~~  179 (311)
T 2p5y_A          160 SYGLKWVSLRYGNVYGPRQD  179 (311)
T ss_dssp             HHCCCEEEEEECEEECTTCC
T ss_pred             HcCCCEEEEeeccccCcCCC
Confidence            36999999999999998653

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.92  E-value=1.6e-25  Score=196.43  Aligned_cols=143  Identities=17%  Similarity=0.231  Sum_probs=102.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcC--ccEEEEcCCCC-
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG--VHTVIDCATGR-  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~--~d~vi~~ag~~-  159 (269)
                      +|+||||||+||||++++++|+++|++|++++|+.+.       .+  ++.+|++|++++.+++++  +|+|||||+.. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~   72 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERR   72 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------CHHHHHHHCCSEEEECC----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccC
Confidence            5789999999999999999999999999999986543       12  778999999999999874  89999999842 


Q ss_pred             ------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC------------CCCCCcHHHHHHHHHHHHHhcCCCE
Q 024290          160 ------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD------------KHPEVPLMEIKYCTEQFLQDSGLPH  221 (269)
Q Consensus       160 ------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~------------~~~~~~y~~sK~~~e~~~~~~gi~~  221 (269)
                            .++..+++|+.++.++++++++.++ +|||+||..+.            ..+..+|+.+|.++|++++..++++
T Consensus        73 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  151 (315)
T 2ydy_A           73 PDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGA  151 (315)
T ss_dssp             ---------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTC
T ss_pred             hhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCe
Confidence                  3456778999999999999999887 99999997642            2456789999999999999999999


Q ss_pred             EEEEcCcccccCcc
Q 024290          222 VIIRLWPYWAICST  235 (269)
Q Consensus       222 ~ilrp~~i~g~~~~  235 (269)
                      +++||+.+||+...
T Consensus       152 ~~lR~~~v~G~~~~  165 (315)
T 2ydy_A          152 AVLRIPILYGEVEK  165 (315)
T ss_dssp             EEEEECSEECSCSS
T ss_pred             EEEeeeeeeCCCCc
Confidence            99999999998654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.92  E-value=1.5e-25  Score=193.71  Aligned_cols=143  Identities=24%  Similarity=0.317  Sum_probs=120.5

Q ss_pred             EEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCCc
Q 024290           85 SILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE  162 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~  162 (269)
                      +|+||||+|+||+++++.|+++  |++|++++|++++... +...+++++.+|++|++++.++++++|+|||+++...  
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~--   77 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-LAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEV--   77 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-HHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-hhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc--
Confidence            4899999999999999999998  9999999998665433 3345789999999999999999999999999998532  


Q ss_pred             cchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEEEEEcCcccccCc
Q 024290          163 PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       163 ~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g~~~  234 (269)
                         +.|+.++.+++++|++.++++||++||.++. ....+|+.+|.++|+++++.+++++++||+.++++..
T Consensus        78 ---~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~-~~~~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~~~~~  145 (286)
T 2zcu_A           78 ---GQRAPQHRNVINAAKAAGVKFIAYTSLLHAD-TSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYL  145 (286)
T ss_dssp             -------CHHHHHHHHHHHHTCCEEEEEEETTTT-TCCSTTHHHHHHHHHHHHHHCSEEEEEEECCBHHHHH
T ss_pred             ---hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC-CCcchhHHHHHHHHHHHHHcCCCeEEEeChHHhhhhH
Confidence               2578899999999999999999999998775 3346899999999999999999999999998888654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.92  E-value=2.4e-25  Score=191.19  Aligned_cols=145  Identities=19%  Similarity=0.194  Sum_probs=124.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC--
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP--  160 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~--  160 (269)
                      ||+||||||+|+||++++++|+++|++|++++|++....    ..+++++.+|++|++.+.++++++|+|||||+...  
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~   77 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVER   77 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSCC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCCC
Confidence            578999999999999999999999999999999865421    13678899999999999999999999999998542  


Q ss_pred             -CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC--------------CCCCcHHHHHHHHHHHHH----hcCCCE
Q 024290          161 -EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------HPEVPLMEIKYCTEQFLQ----DSGLPH  221 (269)
Q Consensus       161 -~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~--------------~~~~~y~~sK~~~e~~~~----~~gi~~  221 (269)
                       ++..+++|+.++.++++++++.++++|||+||..+..              .+..+|+.+|.++|.+++    +.++++
T Consensus        78 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~  157 (267)
T 3ay3_A           78 PWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIET  157 (267)
T ss_dssp             CHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCE
Confidence             3456779999999999999999999999999975421              134789999999998875    469999


Q ss_pred             EEEEcCcccc
Q 024290          222 VIIRLWPYWA  231 (269)
Q Consensus       222 ~ilrp~~i~g  231 (269)
                      +++||+++|+
T Consensus       158 ~~lrp~~v~~  167 (267)
T 3ay3_A          158 LNIRIGSCFP  167 (267)
T ss_dssp             EEEEECBCSS
T ss_pred             EEEeceeecC
Confidence            9999999984

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.92  E-value=9.1e-25  Score=191.83  Aligned_cols=153  Identities=23%  Similarity=0.326  Sum_probs=120.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC-CCCCCcc--cccc-----CCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPAD--FLRD-----WGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R-~~~~~~~--~~~~-----~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      +|+||||||+||||++++++|+++|++|++++| +++....  .+..     .+++++.+|++|++++.++++++|+|||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   80 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH   80 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence            478999999999999999999999999999998 5432111  0111     1367889999999999999999999999


Q ss_pred             cCCCCC------CccchhhcHHHHHHHHHHHHHc-CCCeEEEecccCCC---C--------------------CCCC-cH
Q 024290          155 CATGRP------EEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCD---K--------------------HPEV-PL  203 (269)
Q Consensus       155 ~ag~~~------~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~~~---~--------------------~~~~-~y  203 (269)
                      +|+...      .+.++++|+.++.+++++|++. ++++|||+||..+.   .                    .+.. +|
T Consensus        81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y  160 (322)
T 2p4h_X           81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNY  160 (322)
T ss_dssp             CCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred             cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccH
Confidence            997421      2337789999999999999988 78999999997521   0                    0111 69


Q ss_pred             HHHHHHHHHHHH----hcCCCEEEEEcCcccccCcc
Q 024290          204 MEIKYCTEQFLQ----DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       204 ~~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+|...|.++.    +.|++++++||+++||+...
T Consensus       161 ~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~  196 (322)
T 2p4h_X          161 AVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVC  196 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCS
T ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCC
Confidence            999999998764    36999999999999998643

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.92  E-value=1.4e-24  Score=192.70  Aligned_cols=151  Identities=20%  Similarity=0.265  Sum_probs=125.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC------Ccccc------ccCCCEEEEcCCCCCCcHHHHhc--C
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA------PADFL------RDWGATVVNADLSKPETIPATLV--G  148 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~------~~~~~------~~~~~~~i~~Dl~d~~~l~~~~~--~  148 (269)
                      +|+||||||+||||++++++|+++|++|++++|....      ..+.+      ...+++++.+|++|.+++.++++  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            5799999999999999999999999999999986433      11111      12368899999999999999997  8


Q ss_pred             ccEEEEcCCCC-------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC-------------CC-CCcHHHHH
Q 024290          149 VHTVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HP-EVPLMEIK  207 (269)
Q Consensus       149 ~d~vi~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~-------------~~-~~~y~~sK  207 (269)
                      +|+|||||+..       .++..+++|+.++.++++++++.++++|||+||..+..             .+ ..+|+.+|
T Consensus        82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK  161 (348)
T 1ek6_A           82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK  161 (348)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred             CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHH
Confidence            99999999953       23456789999999999999999999999999975421             23 57899999


Q ss_pred             HHHHHHHHhc---C--CCEEEEEcCcccccC
Q 024290          208 YCTEQFLQDS---G--LPHVIIRLWPYWAIC  233 (269)
Q Consensus       208 ~~~e~~~~~~---g--i~~~ilrp~~i~g~~  233 (269)
                      .++|.+++..   +  ++++++||+++||+.
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~  192 (348)
T 1ek6_A          162 FFIEEMIRDLCQADKTWNAVLLRYFNPTGAH  192 (348)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEEECEEECCC
T ss_pred             HHHHHHHHHHHhcCCCcceEEEeeccccCCC
Confidence            9999988542   4  999999999999984

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=1.4e-24  Score=183.36  Aligned_cols=147  Identities=14%  Similarity=0.124  Sum_probs=118.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .|+||+||||||+|+||+++++.|+++| ++|++++|++++..+ +...+++++++|++|++++.++++++|+||||++.
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~   98 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-PYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG   98 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-SCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-cccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence            3667899999999999999999999999 999999998765544 23347899999999999999999999999999985


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCC-----------cHHHHHHHHHHHHHhcCCCEEEEEcC
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEV-----------PLMEIKYCTEQFLQDSGLPHVIIRLW  227 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~-----------~y~~sK~~~e~~~~~~gi~~~ilrp~  227 (269)
                      ...       ...+.++++++++.++++||++||..+......           .+...|...|+++++.++++++||||
T Consensus        99 ~~~-------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg  171 (236)
T 3qvo_A           99 EDL-------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPA  171 (236)
T ss_dssp             TTH-------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSEEEEEEEC
T ss_pred             Cch-------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCCEEEEeCC
Confidence            321       235678999999999999999999875322111           23455677788889999999999999


Q ss_pred             cccccCc
Q 024290          228 PYWAICS  234 (269)
Q Consensus       228 ~i~g~~~  234 (269)
                      +++++..
T Consensus       172 ~i~~~~~  178 (236)
T 3qvo_A          172 WLTDEDI  178 (236)
T ss_dssp             EEECCSC
T ss_pred             cccCCCC
Confidence            9998754

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.92  E-value=1.7e-25  Score=204.66  Aligned_cols=154  Identities=18%  Similarity=0.242  Sum_probs=124.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC---cc---c-----------cccCCCEEEEcCCCCCCcH
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP---AD---F-----------LRDWGATVVNADLSKPETI  142 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~---~~---~-----------~~~~~~~~i~~Dl~d~~~l  142 (269)
                      .+.+|+||||||+||||++|+++|+++|++|++++|+++..   ..   .           ....+++++.+|++|++.+
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            35678999999999999999999999999999999986521   00   0           1124789999999998888


Q ss_pred             HHHhcCccEEEEcCCC----CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC--------------------CC
Q 024290          143 PATLVGVHTVIDCATG----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--------------------KH  198 (269)
Q Consensus       143 ~~~~~~~d~vi~~ag~----~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~--------------------~~  198 (269)
                      . .+.++|+|||||+.    .++...+++|+.++.+++++|++ ++++|||+||..+.                    ..
T Consensus       146 ~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~  223 (427)
T 4f6c_A          146 V-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQL  223 (427)
T ss_dssp             C-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCC
T ss_pred             C-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHhCCCccCCCCCccccccccccCCC
Confidence            8 77899999999994    34567788999999999999999 78999999997650                    22


Q ss_pred             CCCcHHHHHHHHHHHHHh---cCCCEEEEEcCcccccCcc
Q 024290          199 PEVPLMEIKYCTEQFLQD---SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       199 ~~~~y~~sK~~~e~~~~~---~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+.|+.+|.++|.++++   .|++++++|||++||+...
T Consensus       224 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~  263 (427)
T 4f6c_A          224 LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNG  263 (427)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSS
T ss_pred             CCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCC
Confidence            567899999999999876   7999999999999998654

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.92  E-value=2.2e-24  Score=186.58  Aligned_cols=143  Identities=18%  Similarity=0.128  Sum_probs=116.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~  161 (269)
                      ++|+|+|||| ||||++|+++|+++|++|++++|++++... +...+++++.+|++|.+     ++++|+|||+|+....
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~   76 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEA-IRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSG   76 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHH-HHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTT
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhh-HhhCCCeEEEecccccc-----cCCCCEEEECCCcccc
Confidence            3579999998 999999999999999999999998654322 33457899999999855     7789999999985433


Q ss_pred             ccchhhcHHHHHHHHHHHHH--cCCCeEEEecccCC-------------CCCCCCcHHHHHHHHHHHHHhc-CCCEEEEE
Q 024290          162 EPIKKVDWEGKVALIQCAKA--MGIQKYVFYSIHNC-------------DKHPEVPLMEIKYCTEQFLQDS-GLPHVIIR  225 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~--~~v~r~V~~SS~~~-------------~~~~~~~y~~sK~~~e~~~~~~-gi~~~ilr  225 (269)
                      ..      ..+.++++++++  .++++|||+||.++             +..|.++|+.+|.+.|+++++. +++++++|
T Consensus        77 ~~------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilR  150 (286)
T 3ius_A           77 GD------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFR  150 (286)
T ss_dssp             BC------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred             cc------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEe
Confidence            21      235789999998  78899999998753             1234567999999999999998 99999999


Q ss_pred             cCcccccCcccc
Q 024290          226 LWPYWAICSTYT  237 (269)
Q Consensus       226 p~~i~g~~~~~~  237 (269)
                      |+++||+.....
T Consensus       151 p~~v~G~~~~~~  162 (286)
T 3ius_A          151 LAGIYGPGRGPF  162 (286)
T ss_dssp             ECEEEBTTBSSS
T ss_pred             ccceECCCchHH
Confidence            999999975543

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.92  E-value=2.1e-24  Score=195.09  Aligned_cols=152  Identities=20%  Similarity=0.276  Sum_probs=125.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHH-HCCCeEEEEeCCCCCC--------ccccc-----------cCC---CEEEEcCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRAL-DEGYDVRCLVRPRPAP--------ADFLR-----------DWG---ATVVNADLSKP  139 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll-~~G~~V~~~~R~~~~~--------~~~~~-----------~~~---~~~i~~Dl~d~  139 (269)
                      +|+||||||+||||++|++.|+ ++|++|++++|+....        .+.+.           ..+   ++++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3589999999999999999999 9999999999975442        11111           124   88999999999


Q ss_pred             CcHHHHhc--C-ccEEEEcCCCCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC------------
Q 024290          140 ETIPATLV--G-VHTVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK------------  197 (269)
Q Consensus       140 ~~l~~~~~--~-~d~vi~~ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~------------  197 (269)
                      +.+.++++  + +|+|||||+...       ++.++++|+.++.+++++|++.++++|||+||..+..            
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence            99999887  6 999999999542       3456789999999999999999999999999975421            


Q ss_pred             --------CCCCcHHHHHHHHHHHHHh----cCCCEEEEEcCcccccCc
Q 024290          198 --------HPEVPLMEIKYCTEQFLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       198 --------~~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                              .+..+|+.+|.++|.+++.    .+++++++||+++||+..
T Consensus       162 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~  210 (397)
T 1gy8_A          162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHE  210 (397)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCT
T ss_pred             CcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCc
Confidence                    1246799999999998764    599999999999999853

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.91  E-value=1.6e-25  Score=195.33  Aligned_cols=143  Identities=16%  Similarity=0.062  Sum_probs=116.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcC--ccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG--VHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~--~d~vi~~ag~  158 (269)
                      |++|+||||||+||||++|++.|+++|+      +...      ...+++++.+|++|++.+.+++++  +|+|||+|+.
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~   71 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE------DWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAM   71 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC------EEEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc------cccccCceecccCCHHHHHHHHhhcCCCEEEECcee
Confidence            6789999999999999999999999998      2111      111344557899999999999976  9999999985


Q ss_pred             C--------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-----------------CCCCC-cHHHHHHHHHH
Q 024290          159 R--------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-----------------KHPEV-PLMEIKYCTEQ  212 (269)
Q Consensus       159 ~--------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-----------------~~~~~-~y~~sK~~~e~  212 (269)
                      .        .+...+++|+.++.+++++|++.++++|||+||..+.                 ..+.. +|+.+|.+.|+
T Consensus        72 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~  151 (319)
T 4b8w_A           72 VGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDV  151 (319)
T ss_dssp             CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHH
T ss_pred             cccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHH
Confidence            3        2335678999999999999999999999999997542                 11222 59999999998


Q ss_pred             HHHh----cCCCEEEEEcCcccccCcc
Q 024290          213 FLQD----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       213 ~~~~----~gi~~~ilrp~~i~g~~~~  235 (269)
                      +++.    .+++++++||+++||+...
T Consensus       152 ~~~~~~~~~~~~~~ilRp~~v~Gp~~~  178 (319)
T 4b8w_A          152 QNRAYFQQYGCTFTAVIPTNVFGPHDN  178 (319)
T ss_dssp             HHHHHHHHHCCEEEEEEECEEECTTCC
T ss_pred             HHHHHHHhhCCCEEEEeeccccCCCCC
Confidence            8754    7999999999999998764

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.91  E-value=7.2e-24  Score=189.53  Aligned_cols=147  Identities=25%  Similarity=0.339  Sum_probs=122.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc-cccc-cCCCEEEEcC-CCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-DFLR-DWGATVVNAD-LSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~-~~~~-~~~~~~i~~D-l~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |.+|+|+||||||+||++|++.|+++|++|++++|+++... +.+. ..+++++.+| ++|++++.++++++|+||||++
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~   82 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT   82 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCC
Confidence            34678999999999999999999999999999999866531 1122 2368899999 9999999999999999999997


Q ss_pred             CCCCccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCC---CCCCCCcHHHHHHHHHHHHHhcCCCEEEEEcCcccccC
Q 024290          158 GRPEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNC---DKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       158 ~~~~~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~---~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g~~  233 (269)
                      ...    .+.|..+ .+++++|++.+ +++|||+||...   ...+..+|+.+|.++|+++++.+++++++||+. ||+.
T Consensus        83 ~~~----~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~~gi~~~ivrpg~-~g~~  156 (352)
T 1xgk_A           83 SQA----GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGI-YNNN  156 (352)
T ss_dssp             STT----SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSSSCEEEEEECE-EGGG
T ss_pred             CCC----cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHHcCCCEEEEecce-ecCC
Confidence            542    2346666 99999999999 999999999752   234567899999999999999999999999985 5553

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.91  E-value=3.7e-25  Score=193.92  Aligned_cols=144  Identities=20%  Similarity=0.212  Sum_probs=114.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC---Ccccc----ccCCCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA---PADFL----RDWGATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~---~~~~~----~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      +++|+|||||||||||++|++.|+++|++|++++|+...   ..+.+    ...+++++.+|+.          ++|+||
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi   74 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVY   74 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEE
Confidence            557899999999999999999999999999999997651   11111    1224555555554          799999


Q ss_pred             EcCCC-------CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHHHHHH
Q 024290          154 DCATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       154 ~~ag~-------~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~~e~~  213 (269)
                      |+|+.       ..+...++ |+.++.+++++|++.++++|||+||..+.             ..+.++|+.+|.+.|++
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  153 (321)
T 3vps_A           75 HLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMV  153 (321)
T ss_dssp             ECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             ECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence            99984       33445666 99999999999999999999999997531             23457899999999998


Q ss_pred             HHh----cCC-CEEEEEcCcccccCcc
Q 024290          214 LQD----SGL-PHVIIRLWPYWAICST  235 (269)
Q Consensus       214 ~~~----~gi-~~~ilrp~~i~g~~~~  235 (269)
                      ++.    .++ +++++||+++||+...
T Consensus       154 ~~~~~~~~~~~~~~ilRp~~v~G~~~~  180 (321)
T 3vps_A          154 AGAHQRASVAPEVGIVRFFNVYGPGER  180 (321)
T ss_dssp             HHHHHHSSSSCEEEEEEECEEECTTCC
T ss_pred             HHHHHHHcCCCceEEEEeccccCcCCC
Confidence            865    689 9999999999998654

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.91  E-value=1.5e-24  Score=196.35  Aligned_cols=154  Identities=12%  Similarity=0.089  Sum_probs=123.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc----------------cc------cccCCCEEEEcCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----------------DF------LRDWGATVVNADLSK  138 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~----------------~~------~~~~~~~~i~~Dl~d  138 (269)
                      ..+++||||||+||||++|+++|+++|++|++++|......                +.      ....+++++.+|++|
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            45789999999999999999999999999999988532110                00      112468899999999


Q ss_pred             CCcHHHHhcC--ccEEEEcCCCCCC-------c---cchhhcHHHHHHHHHHHHHcCC-CeEEEecccCCC---------
Q 024290          139 PETIPATLVG--VHTVIDCATGRPE-------E---PIKKVDWEGKVALIQCAKAMGI-QKYVFYSIHNCD---------  196 (269)
Q Consensus       139 ~~~l~~~~~~--~d~vi~~ag~~~~-------~---~~~~~n~~~~~~li~a~~~~~v-~r~V~~SS~~~~---------  196 (269)
                      .+.+.+++++  +|+||||||....       +   ..+++|+.++.++++++++.++ ++|||+||.++.         
T Consensus        89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~E  168 (404)
T 1i24_A           89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEE  168 (404)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred             HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCCCc
Confidence            9999999987  9999999985321       1   2567899999999999999887 599999997531         


Q ss_pred             -----------------CCCCCcHHHHHHHHHHHHHh----cCCCEEEEEcCcccccCc
Q 024290          197 -----------------KHPEVPLMEIKYCTEQFLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       197 -----------------~~~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                                       ..+..+|+.+|.++|++++.    .|++++++||+++||+..
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          169 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCC
T ss_pred             cccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCC
Confidence                             22356799999999998754    499999999999999865

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.91  E-value=2.4e-25  Score=192.75  Aligned_cols=135  Identities=20%  Similarity=0.280  Sum_probs=118.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCC--
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGR--  159 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~--  159 (269)
                      |+||||||+||||+++++.|+++|++|++++|.                ++|++|.+.+.++++  ++|+|||+|+..  
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~   69 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------LLDITNISQVQQVVQEIRPHIIIHCAAYTKV   69 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------ccCCCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            489999999999999999999999999999993                379999999999997  799999999853  


Q ss_pred             -----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHHHHHHHHhcCCCE
Q 024290          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQDSGLPH  221 (269)
Q Consensus       160 -----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~~e~~~~~~gi~~  221 (269)
                           .+...+++|+.++.++++++++.++ ||||+||..+.             ..|.++|+.+|.++|++++..+.++
T Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~  148 (287)
T 3sc6_A           70 DQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKY  148 (287)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSE
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCc
Confidence                 4456778999999999999999998 89999997532             2345689999999999999988899


Q ss_pred             EEEEcCcccccCcc
Q 024290          222 VIIRLWPYWAICST  235 (269)
Q Consensus       222 ~ilrp~~i~g~~~~  235 (269)
                      +++||+++||+...
T Consensus       149 ~ilR~~~v~G~~~~  162 (287)
T 3sc6_A          149 FIVRTSWLYGKYGN  162 (287)
T ss_dssp             EEEEECSEECSSSC
T ss_pred             EEEeeeeecCCCCC
Confidence            99999999998543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.91  E-value=1.5e-24  Score=189.94  Aligned_cols=147  Identities=20%  Similarity=0.364  Sum_probs=120.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC----cc---ccccCCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP----AD---FLRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~----~~---~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      +|+|+||||||+||+++++.|+++|++|++++|+....    .+   .+...+++++.+|++|++++.++++++|+|||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            57899999999999999999999999999999985431    01   123457999999999999999999999999999


Q ss_pred             CCCCCCccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCCCC-------CC-CCcHHHHHHHHHHHHHhcCCCEEEEEc
Q 024290          156 ATGRPEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK-------HP-EVPLMEIKYCTEQFLQDSGLPHVIIRL  226 (269)
Q Consensus       156 ag~~~~~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~~~-------~~-~~~y~~sK~~~e~~~~~~gi~~~ilrp  226 (269)
                      ++....    +.|+.++.+++++|++.| +++||+ |+.+...       .+ ...| .+|.++|+++++.+++++++||
T Consensus        84 a~~~~~----~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~g~~~~ilrp  157 (313)
T 1qyd_A           84 LAGGVL----SHHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDIMEHALQPGSITF-IDKRKVRRAIEAASIPYTYVSS  157 (313)
T ss_dssp             CCCSSS----STTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHHTTCCBCEEEC
T ss_pred             Cccccc----hhhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccccccCCCCCcchH-HHHHHHHHHHHhcCCCeEEEEe
Confidence            985432    236778899999999998 999996 5544211       12 2347 9999999999999999999999


Q ss_pred             CcccccCcc
Q 024290          227 WPYWAICST  235 (269)
Q Consensus       227 ~~i~g~~~~  235 (269)
                      +.+++++..
T Consensus       158 ~~~~~~~~~  166 (313)
T 1qyd_A          158 NMFAGYFAG  166 (313)
T ss_dssp             CEEHHHHTT
T ss_pred             ceecccccc
Confidence            999987543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.91  E-value=4.5e-24  Score=190.42  Aligned_cols=151  Identities=17%  Similarity=0.256  Sum_probs=125.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCC-CCccccc----cCCCEEEEcCCCCCCcHHHHhc--CccEEEEc
Q 024290           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRP-APADFLR----DWGATVVNADLSKPETIPATLV--GVHTVIDC  155 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~-~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~  155 (269)
                      |+||||||+||||++|++.|+++ |++|++++|+.. ...+.+.    ..+++++.+|++|.+.+.++++  ++|+||||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            47999999999999999999998 799999999652 1111121    2368899999999999999997  89999999


Q ss_pred             CCCC-------CCccchhhcHHHHHHHHHHHHHc--CCC-------eEEEecccCCC-----------------------
Q 024290          156 ATGR-------PEEPIKKVDWEGKVALIQCAKAM--GIQ-------KYVFYSIHNCD-----------------------  196 (269)
Q Consensus       156 ag~~-------~~~~~~~~n~~~~~~li~a~~~~--~v~-------r~V~~SS~~~~-----------------------  196 (269)
                      |+..       .++.++++|+.++.++++++.+.  +++       +|||+||..+.                       
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~  160 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence            9953       34567789999999999999988  887       99999996421                       


Q ss_pred             CCCCCcHHHHHHHHHHHHHh----cCCCEEEEEcCcccccCc
Q 024290          197 KHPEVPLMEIKYCTEQFLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       197 ~~~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      ..+..+|+.+|.++|.+++.    .+++++++||+++||+..
T Consensus       161 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~  202 (361)
T 1kew_A          161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCC
Confidence            13456799999999998764    599999999999999875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.91  E-value=2.3e-24  Score=190.40  Aligned_cols=154  Identities=19%  Similarity=0.161  Sum_probs=125.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc-ccc----ccCCCEEEEcCCCCCCcHHHHhcC--ccEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-DFL----RDWGATVVNADLSKPETIPATLVG--VHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~-~~~----~~~~~~~i~~Dl~d~~~l~~~~~~--~d~vi  153 (269)
                      .++|+||||||+||||++|++.|+++|++|++++|+.+... ..+    ...+++++.+|++|.+++.+++++  +|+||
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi   91 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY   91 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            45689999999999999999999999999999999765421 111    123578999999999999999875  69999


Q ss_pred             EcCCCC-------CCccchhhcHHHHHHHHHHHHHcCC-CeEEEecccCCC-------------CCCCCcHHHHHHHHHH
Q 024290          154 DCATGR-------PEEPIKKVDWEGKVALIQCAKAMGI-QKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       154 ~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v-~r~V~~SS~~~~-------------~~~~~~y~~sK~~~e~  212 (269)
                      |||+..       .+...+++|+.++.++++++++.++ ++|||+||..+.             ..+..+|+.+|.++|.
T Consensus        92 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  171 (335)
T 1rpn_A           92 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHW  171 (335)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHH
Confidence            999953       2345677999999999999999986 899999996531             1235679999999999


Q ss_pred             HHHh----cCCCEEEEEcCcccccCc
Q 024290          213 FLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.    .+++++++||+++||+..
T Consensus       172 ~~~~~~~~~~~~~~i~r~~~v~Gp~~  197 (335)
T 1rpn_A          172 ITVNYRESFGLHASSGILFNHESPLR  197 (335)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred             HHHHHHHHcCCcEEEEeeCcccCCCC
Confidence            8864    599999999999999854

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.91  E-value=3.3e-25  Score=192.79  Aligned_cols=138  Identities=22%  Similarity=0.213  Sum_probs=118.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcC--ccEEEEcCCCC--
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG--VHTVIDCATGR--  159 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~--~d~vi~~ag~~--  159 (269)
                      |+|+||||+||||+++++.|+ +|++|++++|+..            ++.+|++|.+++.+++++  +|+|||+|+..  
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   67 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------cccccCCCHHHHHHHHHhcCCCEEEECcccCCH
Confidence            479999999999999999999 8999999999752            246899999999999976  99999999843  


Q ss_pred             -----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHHHHHHHHhcCCCE
Q 024290          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQDSGLPH  221 (269)
Q Consensus       160 -----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~~e~~~~~~gi~~  221 (269)
                           .++..+++|+.++.++++++++.++ +|||+||..+.             ..|.++|+.+|.++|++++..+.++
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~  146 (299)
T 1n2s_A           68 DKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKH  146 (299)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSE
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCCCe
Confidence                 2345678999999999999999887 89999997531             1235689999999999999988899


Q ss_pred             EEEEcCcccccCcc
Q 024290          222 VIIRLWPYWAICST  235 (269)
Q Consensus       222 ~ilrp~~i~g~~~~  235 (269)
                      +++||+++||+...
T Consensus       147 ~ilRp~~v~G~~~~  160 (299)
T 1n2s_A          147 LIFRTSWVYAGKGN  160 (299)
T ss_dssp             EEEEECSEECSSSC
T ss_pred             EEEeeeeecCCCcC
Confidence            99999999998643

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.91  E-value=5e-24  Score=187.15  Aligned_cols=140  Identities=13%  Similarity=0.119  Sum_probs=118.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~  158 (269)
                      |++|+||||||+||||++|+++|+++|++|++++|+.               .+|++|.+++.++++  ++|+|||+|+.
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------~~D~~d~~~~~~~~~~~~~d~vih~a~~   65 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASERIDQVYLAAAK   65 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------cCCccCHHHHHHHHHhcCCCEEEEcCee
Confidence            3467999999999999999999999999999988752               269999999999998  99999999995


Q ss_pred             CC--------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC-----------------CCC-CcHHHHHHHHHH
Q 024290          159 RP--------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-----------------HPE-VPLMEIKYCTEQ  212 (269)
Q Consensus       159 ~~--------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~-----------------~~~-~~y~~sK~~~e~  212 (269)
                      ..        +...+++|+.++.++++++++.++++|||+||..+..                 .|. .+|+.+|.+.|+
T Consensus        66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~  145 (321)
T 1e6u_A           66 VGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIK  145 (321)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHH
T ss_pred             cCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHH
Confidence            43        3456778999999999999999999999999975421                 111 379999999999


Q ss_pred             HHHh----cCCCEEEEEcCcccccCcc
Q 024290          213 FLQD----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       213 ~~~~----~gi~~~ilrp~~i~g~~~~  235 (269)
                      +++.    .+++++++||+++||+...
T Consensus       146 ~~~~~~~~~~~~~~ilrp~~v~G~~~~  172 (321)
T 1e6u_A          146 LCESYNRQYGRDYRSVMPTNLYGPHDN  172 (321)
T ss_dssp             HHHHHHHHHCCEEEEEEECEEESTTCC
T ss_pred             HHHHHHHHhCCCEEEEEeCCcCCcCCC
Confidence            8865    5999999999999998754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.91  E-value=1.2e-23  Score=186.37  Aligned_cols=153  Identities=18%  Similarity=0.162  Sum_probs=126.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-cCccE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEG-------YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-VGVHT  151 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G-------~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-~~~d~  151 (269)
                      .+++|+||||||+||||++|+++|+++|       ++|++++|+.+.... ....+++++.+|++|++++.+++ +++|+
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~   89 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-GFSGAVDARAADLSAPGEAEKLVEARPDV   89 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-TCCSEEEEEECCTTSTTHHHHHHHTCCSE
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-ccCCceeEEEcCCCCHHHHHHHHhcCCCE
Confidence            3677899999999999999999999999       899999997654322 12235788999999999999998 58999


Q ss_pred             EEEcCCCC------CCccchhhcHHHHHHHHHHHHHcC-----CCeEEEecccCCCCC-------------CCCcHHHHH
Q 024290          152 VIDCATGR------PEEPIKKVDWEGKVALIQCAKAMG-----IQKYVFYSIHNCDKH-------------PEVPLMEIK  207 (269)
Q Consensus       152 vi~~ag~~------~~~~~~~~n~~~~~~li~a~~~~~-----v~r~V~~SS~~~~~~-------------~~~~y~~sK  207 (269)
                      |||||+..      .+...+++|+.++.++++++++.+     +++||++||..+...             +..+|+.+|
T Consensus        90 vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK  169 (342)
T 2hrz_A           90 IFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQK  169 (342)
T ss_dssp             EEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHH
T ss_pred             EEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHH
Confidence            99999953      334567899999999999998876     899999999754221             567899999


Q ss_pred             HHHHHHHHh----cCCCEEEEEcCcccc-cC
Q 024290          208 YCTEQFLQD----SGLPHVIIRLWPYWA-IC  233 (269)
Q Consensus       208 ~~~e~~~~~----~gi~~~ilrp~~i~g-~~  233 (269)
                      .++|.++++    .+++++++|++.+|| +.
T Consensus       170 ~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg  200 (342)
T 2hrz_A          170 AICELLLSDYSRRGFFDGIGIRLPTICIRPG  200 (342)
T ss_dssp             HHHHHHHHHHHHTTSCEEEEEEECEETTCCS
T ss_pred             HHHHHHHHHHHHhcCCCceeEEeeeEEecCC
Confidence            999998754    478999999999998 54

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.90  E-value=1e-23  Score=186.57  Aligned_cols=150  Identities=21%  Similarity=0.284  Sum_probs=121.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c---cCCCEEEEcCCCCCCcHHHHhc--CccEEEEc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R---DWGATVVNADLSKPETIPATLV--GVHTVIDC  155 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~---~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~  155 (269)
                      |+||||||+||||++++++|+++|++|++++|......+.+   .   ..+++++.+|++|++++.++++  ++|+||||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            47999999999999999999999999999987533221111   1   2357899999999999988886  59999999


Q ss_pred             CCCCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCC-CCcHHHHHHHHHHHH
Q 024290          156 ATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHP-EVPLMEIKYCTEQFL  214 (269)
Q Consensus       156 ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~-~~~y~~sK~~~e~~~  214 (269)
                      ||...       +...+++|+.++.++++++++.++++||++||..+.             ..+ ..+|+.+|.++|+++
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~  160 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence            98532       234677999999999999999999999999987531             112 568999999999987


Q ss_pred             Hh----c-CCCEEEEEcCcccccC
Q 024290          215 QD----S-GLPHVIIRLWPYWAIC  233 (269)
Q Consensus       215 ~~----~-gi~~~ilrp~~i~g~~  233 (269)
                      +.    . +++++++||+++||+.
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~  184 (338)
T 1udb_A          161 TDLQKAQPDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCC
T ss_pred             HHHHHhcCCCceEEEeeceecCCC
Confidence            54    3 7999999999999874

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.90  E-value=8.4e-24  Score=187.09  Aligned_cols=154  Identities=17%  Similarity=0.147  Sum_probs=126.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc-ccc----cCCCEEEEcCCCCCCcHHHHhcC--ccEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD-FLR----DWGATVVNADLSKPETIPATLVG--VHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~-~~~----~~~~~~i~~Dl~d~~~l~~~~~~--~d~vi  153 (269)
                      |++|+||||||+||||++++++|+++|++|++++|+.+.... .+.    ..+++++.+|++|.+++.+++++  +|+||
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            456899999999999999999999999999999998654321 111    13578899999999999999875  69999


Q ss_pred             EcCCCC-------CCccchhhcHHHHHHHHHHHHHcCC-CeEEEecccCC-------------CCCCCCcHHHHHHHHHH
Q 024290          154 DCATGR-------PEEPIKKVDWEGKVALIQCAKAMGI-QKYVFYSIHNC-------------DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       154 ~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v-~r~V~~SS~~~-------------~~~~~~~y~~sK~~~e~  212 (269)
                      ||||..       .++..+++|+.++.++++++++.++ ++|||+||..+             +..+..+|+.+|.++|.
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  160 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHW  160 (345)
T ss_dssp             ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHH
Confidence            999953       3445678999999999999998887 89999999742             22345679999999999


Q ss_pred             HHHh----cCCCEEEEEcCcccccCc
Q 024290          213 FLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.    .+++++++|+.++||+..
T Consensus       161 ~~~~~~~~~~~~~~~~r~~~~~gpg~  186 (345)
T 2z1m_A          161 ITVNYREAYNMFACSGILFNHESPLR  186 (345)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred             HHHHHHHHhCCceEeeeeeeecCCCC
Confidence            8754    589999999999999864

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.90  E-value=8.9e-25  Score=204.31  Aligned_cols=152  Identities=18%  Similarity=0.252  Sum_probs=125.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc------c-----------ccccCCCEEEEcCCCCCCcHHH
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA------D-----------FLRDWGATVVNADLSKPETIPA  144 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~------~-----------~~~~~~~~~i~~Dl~d~~~l~~  144 (269)
                      .+|+|||||||||||++|+++|+++|++|++++|+.....      +           .....+++++.+|+.|++.+. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            3579999999999999999999999999999999865210      0           011247899999999988888 


Q ss_pred             HhcCccEEEEcCCC----CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC--------------------CCCC
Q 024290          145 TLVGVHTVIDCATG----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD--------------------KHPE  200 (269)
Q Consensus       145 ~~~~~d~vi~~ag~----~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~--------------------~~~~  200 (269)
                      +..++|+|||||+.    .+...+.++|+.++.+++++|++ ++++|||+||..+.                    ..+.
T Consensus       228 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~  306 (508)
T 4f6l_B          228 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLT  306 (508)
T ss_dssp             CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCC
T ss_pred             CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCcccccccccccccCC
Confidence            77899999999994    34567788999999999999998 77899999998761                    1245


Q ss_pred             CcHHHHHHHHHHHHHh---cCCCEEEEEcCcccccCcc
Q 024290          201 VPLMEIKYCTEQFLQD---SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       201 ~~y~~sK~~~e~~~~~---~gi~~~ilrp~~i~g~~~~  235 (269)
                      ++|+.+|...|+++++   .|++++++||+++||+...
T Consensus       307 ~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~  344 (508)
T 4f6l_B          307 SPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNG  344 (508)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSS
T ss_pred             CcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCC
Confidence            7899999999999866   7999999999999998654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.90  E-value=1.1e-23  Score=184.67  Aligned_cols=143  Identities=20%  Similarity=0.201  Sum_probs=122.2

Q ss_pred             EEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCC-
Q 024290           85 SILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGR-  159 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~-  159 (269)
                      +||||||+||||++++++|+++  |++|++++|+.+...      +++++.+|++|++++.++++  ++|+|||+|+.. 
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   74 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILS   74 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccC
Confidence            4899999999999999999998  899999999754321      56789999999999999997  899999999853 


Q ss_pred             -----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC--------------CCCCcHHHHHHHHHHHHH----h
Q 024290          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------HPEVPLMEIKYCTEQFLQ----D  216 (269)
Q Consensus       160 -----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~--------------~~~~~y~~sK~~~e~~~~----~  216 (269)
                           .++..+++|+.++.++++++++.++++||++||..+..              .+..+|+.+|.+.|.+++    +
T Consensus        75 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~  154 (317)
T 3ajr_A           75 AKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEK  154 (317)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             CccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHh
Confidence                 23456789999999999999999999999999975421              145789999999998775    4


Q ss_pred             cCCCEEEEEcCcccccC
Q 024290          217 SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       217 ~gi~~~ilrp~~i~g~~  233 (269)
                      .+++++++||+++||+.
T Consensus       155 ~~~~~~~lR~~~~~g~~  171 (317)
T 3ajr_A          155 FGLDVRSLRYPGIISYK  171 (317)
T ss_dssp             HCCEEEEEEECEEECSS
T ss_pred             cCCeEEEEecCcEeccC
Confidence            69999999999999964

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.90  E-value=5.2e-23  Score=182.61  Aligned_cols=149  Identities=16%  Similarity=0.209  Sum_probs=118.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc----cccCCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      .+.+|+||||||+||||++|+++|+++|++|++++|+.....+.    ....+++++.+|+.|..     +.++|+||||
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vih~   98 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-----YIEVDQIYHL   98 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-----CCCCSEEEEC
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh-----hcCCCEEEEC
Confidence            36678999999999999999999999999999999975432221    12346889999998763     5689999999


Q ss_pred             CCCC-------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC------------------CCCCCcHHHHHHHH
Q 024290          156 ATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD------------------KHPEVPLMEIKYCT  210 (269)
Q Consensus       156 ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~------------------~~~~~~y~~sK~~~  210 (269)
                      |+..       .+...+++|+.++.+++++|++.++ +|||+||..+.                  ..+..+|+.+|.++
T Consensus        99 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  177 (343)
T 2b69_A           99 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVA  177 (343)
T ss_dssp             CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHH
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHH
Confidence            9853       2345678999999999999999886 99999987531                  11234599999999


Q ss_pred             HHHHH----hcCCCEEEEEcCcccccCc
Q 024290          211 EQFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      |++++    +.+++++++||+++||+..
T Consensus       178 E~~~~~~~~~~~~~~~ilrp~~v~G~~~  205 (343)
T 2b69_A          178 ETMCYAYMKQEGVEVRVARIFNTFGPRM  205 (343)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred             HHHHHHHHHHhCCcEEEEEEcceeCcCC
Confidence            98874    4699999999999999864

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=1.9e-23  Score=187.67  Aligned_cols=152  Identities=18%  Similarity=0.188  Sum_probs=124.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-----cccc------ccCCCEEEEcCCCCCCcHHHHhcC--c
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-----ADFL------RDWGATVVNADLSKPETIPATLVG--V  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-----~~~~------~~~~~~~i~~Dl~d~~~l~~~~~~--~  149 (269)
                      +|+||||||+||||+++++.|+++|++|++++|+.+..     ....      ...+++++.+|++|.+++.+++++  +
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  103 (375)
T 1t2a_A           24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP  103 (375)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence            37899999999999999999999999999999975431     1111      123678899999999999999875  6


Q ss_pred             cEEEEcCCCCC-------CccchhhcHHHHHHHHHHHHHcCC---CeEEEecccCCC-------------CCCCCcHHHH
Q 024290          150 HTVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGI---QKYVFYSIHNCD-------------KHPEVPLMEI  206 (269)
Q Consensus       150 d~vi~~ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v---~r~V~~SS~~~~-------------~~~~~~y~~s  206 (269)
                      |+|||||+...       ++..+++|+.++.++++++++.++   ++|||+||..+.             ..+..+|+.+
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~s  183 (375)
T 1t2a_A          104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  183 (375)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHH
Confidence            99999999532       345677899999999999999988   899999997542             1245689999


Q ss_pred             HHHHHHHHHh----cCCCEEEEEcCcccccCc
Q 024290          207 KYCTEQFLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       207 K~~~e~~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      |.++|.+++.    .+++++++||+++||+..
T Consensus       184 K~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~  215 (375)
T 1t2a_A          184 KLYAYWIVVNFREAYNLFAVNGILFNHESPRR  215 (375)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEecccccCCCC
Confidence            9999998754    589999999999999853

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1.7e-23  Score=194.41  Aligned_cols=154  Identities=22%  Similarity=0.244  Sum_probs=126.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHC---CCeEEEEeCCCCCCc------cccc--------------cCCCEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDE---GYDVRCLVRPRPAPA------DFLR--------------DWGATVVNADL  136 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~---G~~V~~~~R~~~~~~------~~~~--------------~~~~~~i~~Dl  136 (269)
                      ...+|+||||||+||||++|+++|+++   |++|++++|+.+...      +.+.              ..+++++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            467899999999999999999999999   999999999765321      1111              14789999999


Q ss_pred             C------CCCcHHHHhcCccEEEEcCCCC---CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCC--------
Q 024290          137 S------KPETIPATLVGVHTVIDCATGR---PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP--------  199 (269)
Q Consensus       137 ~------d~~~l~~~~~~~d~vi~~ag~~---~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~--------  199 (269)
                      +      |.+.+.++++++|+|||||+..   ++...+++|+.++.+++++|++.++++|||+||.++....        
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~  229 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTED  229 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSS
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCc
Confidence            8      4457888889999999999953   4556788999999999999999999999999996542110        


Q ss_pred             ----------------CCcHHHHHHHHHHHHHh----cCCCEEEEEcCcccccC
Q 024290          200 ----------------EVPLMEIKYCTEQFLQD----SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       200 ----------------~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~i~g~~  233 (269)
                                      .+.|+.+|...|.++++    .+++++++||+++||+.
T Consensus       230 ~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~  283 (478)
T 4dqv_A          230 ADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADT  283 (478)
T ss_dssp             SCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCS
T ss_pred             ccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCC
Confidence                            13399999999998865    59999999999999974

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.90  E-value=6.7e-24  Score=184.07  Aligned_cols=134  Identities=21%  Similarity=0.231  Sum_probs=117.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGR  159 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~  159 (269)
                      ..++|||||||||||++|++.|+++|++|++++|+                .+|++|.+++.++++  ++|+|||||+..
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~Dl~d~~~~~~~~~~~~~d~vih~A~~~   74 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------DLDITNVLAVNKFFNEKKPNVVINCAAHT   74 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------cCCCCCHHHHHHHHHhcCCCEEEECCccC
Confidence            45799999999999999999999999999999996                379999999999998  799999999953


Q ss_pred             C-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHHHHHHHHhcCC
Q 024290          160 P-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQDSGL  219 (269)
Q Consensus       160 ~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~~e~~~~~~gi  219 (269)
                      .       ++..+++|+.++.++++++++.++ +|||+||..+.             ..+..+|+.+|.++|++++..+.
T Consensus        75 ~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~  153 (292)
T 1vl0_A           75 AVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNP  153 (292)
T ss_dssp             CHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS
T ss_pred             CHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCC
Confidence            2       345678999999999999999988 99999997531             12456899999999999999888


Q ss_pred             CEEEEEcCccccc
Q 024290          220 PHVIIRLWPYWAI  232 (269)
Q Consensus       220 ~~~ilrp~~i~g~  232 (269)
                      +++++||+++||+
T Consensus       154 ~~~~lR~~~v~G~  166 (292)
T 1vl0_A          154 KYYIVRTAWLYGD  166 (292)
T ss_dssp             SEEEEEECSEESS
T ss_pred             CeEEEeeeeeeCC
Confidence            9999999999998

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.90  E-value=1.1e-23  Score=183.90  Aligned_cols=143  Identities=24%  Similarity=0.350  Sum_probs=116.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-------Ccc--ccccCCCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-------PAD--FLRDWGATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-------~~~--~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      ||+|+||||||+||+++++.|+++|++|++++|+...       ...  .+...+++++++|++|++++.++++++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            5789999999999999999999999999999998611       110  1223579999999999999999999999999


Q ss_pred             EcCCCCCCccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCCCC------CC-CCcHHHHHHHHHHHHHhcCCCEEEEE
Q 024290          154 DCATGRPEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK------HP-EVPLMEIKYCTEQFLQDSGLPHVIIR  225 (269)
Q Consensus       154 ~~ag~~~~~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~~~------~~-~~~y~~sK~~~e~~~~~~gi~~~ilr  225 (269)
                      |+++...        +.++.+++++|++.| +++||+ |+.+...      .| ...| .+|..+|+++++.+++++++|
T Consensus        82 ~~a~~~~--------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~i~~~~lr  151 (307)
T 2gas_A           82 CAAGRLL--------IEDQVKIIKAIKEAGNVKKFFP-SEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEAEGVPYTYLC  151 (307)
T ss_dssp             ECSSSSC--------GGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHHHTCCBEEEE
T ss_pred             ECCcccc--------cccHHHHHHHHHhcCCceEEee-cccccCcccccCCCcchhHH-HHHHHHHHHHHHcCCCeEEEE
Confidence            9998532        456789999999998 999985 5544211      11 2357 999999999999999999999


Q ss_pred             cCcccccCcc
Q 024290          226 LWPYWAICST  235 (269)
Q Consensus       226 p~~i~g~~~~  235 (269)
                      |+.+++++..
T Consensus       152 p~~~~~~~~~  161 (307)
T 2gas_A          152 CHAFTGYFLR  161 (307)
T ss_dssp             CCEETTTTGG
T ss_pred             cceeeccccc
Confidence            9999997643

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.90  E-value=5.6e-24  Score=184.10  Aligned_cols=154  Identities=19%  Similarity=0.158  Sum_probs=123.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------CccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d~  151 (269)
                      +++|+++||||+|+||++++++|+++|++|++++|+.++..+....  ..+.++.+|++|.+++.++++       ++|+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            5678999999999999999999999999999999987655443332  357899999999999888774       7899


Q ss_pred             EEEcCCCCC-----------CccchhhcHHH----HHHHHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 024290          152 VIDCATGRP-----------EEPIKKVDWEG----KVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       152 vi~~ag~~~-----------~~~~~~~n~~~----~~~li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~  214 (269)
                      ||||||...           ++..+++|+.+    ++.+++.+++.+.++||++||...  +..+..+|+.+|.++|.+.
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  162 (281)
T 3m1a_A           83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLS  162 (281)
T ss_dssp             EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHHH
Confidence            999999421           23456789999    555555567778889999999764  3445678999999999876


Q ss_pred             Hh-------cCCCEEEEEcCcccccCc
Q 024290          215 QD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       215 ~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.       .|+++++++||++++++.
T Consensus       163 ~~la~e~~~~gi~v~~v~Pg~v~t~~~  189 (281)
T 3m1a_A          163 EGLADEVAPFGIKVLIVEPGAFRTNLF  189 (281)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred             HHHHHHhhccCcEEEEEecCccccccc
Confidence            42       689999999999988764

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.90  E-value=7e-24  Score=185.17  Aligned_cols=142  Identities=24%  Similarity=0.404  Sum_probs=116.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC--c------cccccCCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--A------DFLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~--~------~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      +|+|+||||||+||+++++.|+++|++|++++|+....  .      +.+...+++++++|++|++++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            57899999999999999999999999999999975432  1      112345899999999999999999999999999


Q ss_pred             cCCCCCCccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCCCC---C---C-CCcHHHHHHHHHHHHHhcCCCEEEEEc
Q 024290          155 CATGRPEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK---H---P-EVPLMEIKYCTEQFLQDSGLPHVIIRL  226 (269)
Q Consensus       155 ~ag~~~~~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~~~---~---~-~~~y~~sK~~~e~~~~~~gi~~~ilrp  226 (269)
                      +++..        ++.++.+++++|++.| +++||+ |+.+...   .   + ...| .+|..+|+++++.+++++++||
T Consensus        84 ~a~~~--------~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~~r~  153 (308)
T 1qyc_A           84 TVGSL--------QIESQVNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAKSVF-EVKAKVRRAIEAEGIPYTYVSS  153 (308)
T ss_dssp             CCCGG--------GSGGGHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHHHTCCBEEEEC
T ss_pred             CCcch--------hhhhHHHHHHHHHhcCCCceEee-cccccCccccccCCcchhHH-HHHHHHHHHHHhcCCCeEEEEe
Confidence            99842        2345689999999998 999985 6554221   1   1 1247 9999999999999999999999


Q ss_pred             CcccccCc
Q 024290          227 WPYWAICS  234 (269)
Q Consensus       227 ~~i~g~~~  234 (269)
                      +.+++++.
T Consensus       154 ~~~~~~~~  161 (308)
T 1qyc_A          154 NCFAGYFL  161 (308)
T ss_dssp             CEEHHHHT
T ss_pred             ceeccccc
Confidence            99998754

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.89  E-value=6.8e-23  Score=176.71  Aligned_cols=156  Identities=17%  Similarity=0.087  Sum_probs=128.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.++..+...+  .++.++.+|++|.+++.++++       ++|
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   87 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLD   87 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            57789999999999999999999999999999999987765443322  368899999999999888875       799


Q ss_pred             EEEEcCCCCCC-------------ccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          151 TVIDCATGRPE-------------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       151 ~vi~~ag~~~~-------------~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      +||||||....             +..+++|+.++.++++++    ++.+.++||++||...  ...+...|+.+|.+++
T Consensus        88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  167 (271)
T 3tzq_B           88 IVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIE  167 (271)
T ss_dssp             EEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHH
Confidence            99999995421             245679999999988887    6667789999999764  3344568999999999


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+.+.       .|+++++|+||+++++...
T Consensus       168 ~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  198 (271)
T 3tzq_B          168 TLTRYVATQYGRHGVRCNAIAPGLVRTPRLE  198 (271)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred             HHHHHHHHHHhhcCEEEEEEEeCCCcCcccc
Confidence            87643       6899999999999998643

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.89  E-value=1.6e-23  Score=186.90  Aligned_cols=151  Identities=13%  Similarity=0.191  Sum_probs=120.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCC-ccccccCCCEEEEcCCCCCCcHHHHhc-----CccEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAP-ADFLRDWGATVVNADLSKPETIPATLV-----GVHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~-~~~~~~~~~~~i~~Dl~d~~~l~~~~~-----~~d~vi  153 (269)
                      +++|+||||||+||||++|+++|+++| ++|++++|+.... ...+.  ++. +.+|++|.+.+.++++     ++|+||
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vi  120 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV--DLN-IADYMDKEDFLIQIMAGEEFGDVEAIF  120 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTT--TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhccc--Cce-EeeecCcHHHHHHHHhhcccCCCCEEE
Confidence            566899999999999999999999999 9999999975432 11111  333 6789999888988886     599999


Q ss_pred             EcCCCC-----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC-------------CCCCcHHHHHHHHHHHHH
Q 024290          154 DCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       154 ~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~-------------~~~~~y~~sK~~~e~~~~  215 (269)
                      |+|+..     .++..+++|+.++.++++++++.++ +|||+||..+..             .+..+|+.+|.++|++++
T Consensus       121 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  199 (357)
T 2x6t_A          121 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVR  199 (357)
T ss_dssp             ECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHH
T ss_pred             ECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHH
Confidence            999953     2345678999999999999999998 999999975421             235689999999999886


Q ss_pred             h----cCCCEEEEEcCcccccCcc
Q 024290          216 D----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       216 ~----~gi~~~ilrp~~i~g~~~~  235 (269)
                      .    .+++++++||+++||+...
T Consensus       200 ~~~~~~g~~~~ilRp~~v~Gp~~~  223 (357)
T 2x6t_A          200 QILPEANSQIVGFRYFNVYGPREG  223 (357)
T ss_dssp             HHGGGCSSCEEEEEECEEESSSCT
T ss_pred             HHHHHcCCCEEEEecCeEECCCCC
Confidence            5    4899999999999998653

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.89  E-value=2e-22  Score=171.66  Aligned_cols=150  Identities=11%  Similarity=0.041  Sum_probs=119.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.+.     ...++.++.+|++|++++.++++       ++|+|
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~l   78 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQYPFATEVMDVADAAQVAQVCQRLLAETERLDAL   78 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999999999999999999999999999997642     12247889999999999888874       79999


Q ss_pred             EEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 024290          153 IDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       153 i~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~  215 (269)
                      |||||...           ++..+++|+.++.++++++    ++.+.++||++||....  ..+...|+.+|.+++.+.+
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  158 (250)
T 2fwm_X           79 VNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLAL  158 (250)
T ss_dssp             EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHHHH
Confidence            99999532           2345678999988888877    55677899999998653  3345679999999998765


Q ss_pred             h-------cCCCEEEEEcCcccccCc
Q 024290          216 D-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .       .|+++++++||++++++.
T Consensus       159 ~la~e~~~~gi~v~~v~Pg~v~t~~~  184 (250)
T 2fwm_X          159 SVGLELAGSGVRCNVVSPGSTDTDMQ  184 (250)
T ss_dssp             HHHHHHGGGTCEEEEEEECCC-----
T ss_pred             HHHHHhCccCCEEEEEECCcccCccc
Confidence            3       599999999999999864

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.89  E-value=2.6e-23  Score=179.26  Aligned_cols=157  Identities=10%  Similarity=0.038  Sum_probs=125.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc-CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD-WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~-~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +.+++|+|+||||+|+||++++++|+++|++|++++|+.+...+..   .. .++.++.+|++|++++.++++       
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3577899999999999999999999999999999999754322211   11 157899999999999888875       


Q ss_pred             CccEEEEcCCCCC-------------CccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCCCCC---CCCcHHHHH
Q 024290          148 GVHTVIDCATGRP-------------EEPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDKH---PEVPLMEIK  207 (269)
Q Consensus       148 ~~d~vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~~~~---~~~~y~~sK  207 (269)
                      ++|+||||||...             ++..+++|+.++.++++++.+    .+.++||++||......   +...|+.+|
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK  171 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATK  171 (278)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHH
T ss_pred             CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHH
Confidence            7999999999532             123567899999998888765    36679999999865322   446799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .++|.+++.       .|++++++|||++++++..
T Consensus       172 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (278)
T 2bgk_A          172 HAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLT  206 (278)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCT
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhh
Confidence            999987753       5899999999999998643

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.89  E-value=3e-23  Score=178.13  Aligned_cols=155  Identities=18%  Similarity=0.086  Sum_probs=124.6

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc---CCCEEEEcCCCCCCcHHHHhc-----
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD---WGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~---~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      +.+++|+++||||+|+||+++++.|+++|++|++++|+.++..+..   ..   .++.++++|++|+++++++++     
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999865433221   11   357889999999999888764     


Q ss_pred             --CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCCC---CCCCCcHHHHH
Q 024290          148 --GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD---KHPEVPLMEIK  207 (269)
Q Consensus       148 --~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~~---~~~~~~y~~sK  207 (269)
                        ++|+||||||...           ++..+++|+.++.++++++.+    .+.++||++||....   ..+...|+.+|
T Consensus        86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  165 (262)
T 3pk0_A           86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATK  165 (262)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHH
Confidence              7999999999432           223467899998888777654    477899999997653   34456799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .+++.+.+.       .|+++++|+||+++++.
T Consensus       166 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  198 (262)
T 3pk0_A          166 AAQLGFMRTAAIELAPHKITVNAIMPGNIMTEG  198 (262)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcc
Confidence            999987753       69999999999999874

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.89  E-value=5.2e-23  Score=199.23  Aligned_cols=155  Identities=21%  Similarity=0.291  Sum_probs=127.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc------cccCCCEEEEcCCCCCCcHHHHhc--CccE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF------LRDWGATVVNADLSKPETIPATLV--GVHT  151 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~  151 (269)
                      .+++|+||||||+||||++|+++|+++|++|++++|+.....+.      +...+++++.+|++|++++.++++  ++|+
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~   87 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS   87 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence            46678999999999999999999999999999999975443211      123468899999999999999997  8999


Q ss_pred             EEEcCCCCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC-----------------CCCCcHHHHH
Q 024290          152 VIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK-----------------HPEVPLMEIK  207 (269)
Q Consensus       152 vi~~ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~-----------------~~~~~y~~sK  207 (269)
                      |||||+...       ....+++|+.++.+++++|++.++++||++||..+..                 .+..+|+.+|
T Consensus        88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK  167 (699)
T 1z45_A           88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTK  167 (699)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHH
T ss_pred             EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHH
Confidence            999999543       2346779999999999999999999999999975421                 2346799999


Q ss_pred             HHHHHHHHh------cCCCEEEEEcCcccccCc
Q 024290          208 YCTEQFLQD------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       208 ~~~e~~~~~------~gi~~~ilrp~~i~g~~~  234 (269)
                      .++|++++.      .+++++++||+++||+..
T Consensus       168 ~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~  200 (699)
T 1z45_A          168 YAIENILNDLYNSDKKSWKFAILRYFNPIGAHP  200 (699)
T ss_dssp             HHHHHHHHHHHHHSTTSCEEEEEEECEEECCCT
T ss_pred             HHHHHHHHHHHHhccCCCcEEEEEeccccCCCc
Confidence            999998864      689999999999999753

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.89  E-value=2.1e-23  Score=178.65  Aligned_cols=155  Identities=17%  Similarity=0.070  Sum_probs=123.9

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHh-------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.++..+..+     ..++.++.+|++|++++.+++       
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35778999999999999999999999999999999997654332211     124678899999999888877       


Q ss_pred             -cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHH
Q 024290          147 -VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (269)
Q Consensus       147 -~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~  208 (269)
                       .++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||....  ..+...|+.+|.
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  164 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKG  164 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHH
Confidence             57999999999532           2235678999998888877    45667899999997642  344567999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +++.+.+.       .|+++++++||.+++++
T Consensus       165 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  196 (260)
T 2ae2_A          165 AMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL  196 (260)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEECSBCSHH
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEecCCCCCcc
Confidence            99988753       48999999999999875

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.89  E-value=2.2e-23  Score=178.77  Aligned_cols=156  Identities=18%  Similarity=0.108  Sum_probs=122.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.++..+...+  ..+.++.+|++|++++.++++       ++|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   83 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   83 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            46789999999999999999999999999999999986543322211  136789999999999888875       899


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHH----HHHHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~----a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~  213 (269)
                      +||||||...           ++..+++|+.++.++++    .+++.+.++||++||....  ..+...|+.+|.+++.+
T Consensus        84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  163 (260)
T 1nff_A           84 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGL  163 (260)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHH
Confidence            9999999432           22356788888865544    4556677899999998653  33445799999999987


Q ss_pred             HHh-------cCCCEEEEEcCcccccCcc
Q 024290          214 LQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       214 ~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+.       .|+++++++||++++++..
T Consensus       164 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  192 (260)
T 1nff_A          164 TKSTALELGPSGIRVNSIHPGLVKTPMTD  192 (260)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCSGGGT
T ss_pred             HHHHHHHhCccCcEEEEEEeCCCCCCccc
Confidence            643       6899999999999998644

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.89  E-value=9.1e-24  Score=184.33  Aligned_cols=147  Identities=14%  Similarity=0.210  Sum_probs=120.2

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCC-ccccccCCCEEEEcCCCCCCcHHHHhcC-----ccEEEEcCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAP-ADFLRDWGATVVNADLSKPETIPATLVG-----VHTVIDCAT  157 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~-~~~~~~~~~~~i~~Dl~d~~~l~~~~~~-----~d~vi~~ag  157 (269)
                      +||||||+||||++|+++|+++| ++|++++|+.... ...+.  ++. +.+|++|.+.+.+++++     +|+|||||+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~   77 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV--DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGA   77 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH--TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC--cce-eccccccHHHHHHHHhccccCCCcEEEECcc
Confidence            48999999999999999999999 9999999975432 11111  233 67899998889988875     999999998


Q ss_pred             CCC-----CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC-------------CCCCCcHHHHHHHHHHHHHh---
Q 024290          158 GRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD-------------KHPEVPLMEIKYCTEQFLQD---  216 (269)
Q Consensus       158 ~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~-------------~~~~~~y~~sK~~~e~~~~~---  216 (269)
                      ...     ++..+++|+.++.++++++++.++ +|||+||..+.             ..|..+|+.+|.+.|++++.   
T Consensus        78 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~  156 (310)
T 1eq2_A           78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILP  156 (310)
T ss_dssp             CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGG
T ss_pred             cccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHH
Confidence            532     345678999999999999999999 99999997531             13356799999999998865   


Q ss_pred             -cCCCEEEEEcCcccccCcc
Q 024290          217 -SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       217 -~gi~~~ilrp~~i~g~~~~  235 (269)
                       .+++++++||+++||+...
T Consensus       157 ~~g~~~~~lrp~~v~G~~~~  176 (310)
T 1eq2_A          157 EANSQIVGFRYFNVYGPREG  176 (310)
T ss_dssp             GCSSCEEEEEECEEESSSCG
T ss_pred             HcCCCEEEEeCCcEECcCCC
Confidence             4899999999999998754

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.89  E-value=1.6e-23  Score=179.61  Aligned_cols=157  Identities=17%  Similarity=0.081  Sum_probs=117.7

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHh-------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      +.+++|+|+||||+|+||+++++.|+++|++|++++|+.++..+...     ...+.++.+|++|.+++.+++       
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            35778999999999999999999999999999999997544332211     125788999999998888776       


Q ss_pred             -cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHH
Q 024290          147 -VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (269)
Q Consensus       147 -~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~  208 (269)
                       .++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||....  ..+..+|+.+|.
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  169 (266)
T 1xq1_A           90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKG  169 (266)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHH
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHH
Confidence             57899999999422           1235678999999998887    55678899999997652  345678999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +++.+++.       .|++++++|||++++++..
T Consensus       170 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  203 (266)
T 1xq1_A          170 ALNQLARNLACEWASDGIRANAVAPAVIATPLAE  203 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEECCSCC-----
T ss_pred             HHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhh
Confidence            99987753       5999999999999998643

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.89  E-value=7.5e-23  Score=196.97  Aligned_cols=153  Identities=20%  Similarity=0.254  Sum_probs=127.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCc-HHHHhcCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPET-IPATLVGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~-l~~~~~~~d~vi~~ag~  158 (269)
                      +++|+|+||||+||||++++++|+++ |++|++++|+.+...+.....+++++.+|++|.++ +.++++++|+|||||+.
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~  392 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI  392 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCC
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECcee
Confidence            46789999999999999999999998 89999999987665544444578999999999865 77788899999999985


Q ss_pred             CC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC--------------------CCCCcHHHHHHHHH
Q 024290          159 RP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK--------------------HPEVPLMEIKYCTE  211 (269)
Q Consensus       159 ~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~--------------------~~~~~y~~sK~~~e  211 (269)
                      ..       +...+++|+.++.+++++|++.+ ++|||+||..+..                    .+.++|+.+|.++|
T Consensus       393 ~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E  471 (660)
T 1z7e_A          393 ATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD  471 (660)
T ss_dssp             CCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHH
T ss_pred             cCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHH
Confidence            33       23456789999999999999998 8999999965310                    12236999999999


Q ss_pred             HHHH----hcCCCEEEEEcCcccccCc
Q 024290          212 QFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++++    +.+++++++||+++||+..
T Consensus       472 ~~~~~~~~~~gi~~~ilRpg~v~Gp~~  498 (660)
T 1z7e_A          472 RVIWAYGEKEGLQFTLFRPFNWMGPRL  498 (660)
T ss_dssp             HHHHHHHHHHCCCEEEEEECSEESTTS
T ss_pred             HHHHHHHHHcCCCEEEECCCcccCCCc
Confidence            9874    4699999999999999865

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.89  E-value=1.7e-23  Score=186.80  Aligned_cols=151  Identities=13%  Similarity=0.113  Sum_probs=119.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-----CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcC---ccEEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG-----YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG---VHTVID  154 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G-----~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~---~d~vi~  154 (269)
                      +|+||||||+||||++|+++|+++|     ++|++++|+.....  +...+++++.+|++|.+++.+++++   +|+|||
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih   78 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFY   78 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEE
Confidence            3689999999999999999999999     99999999865533  2345789999999999999999988   999999


Q ss_pred             cCCCCC--CccchhhcHHHHHHHHHHHHHc--CCCeEE-------EecccCCCC---------------CC-CCcHHHHH
Q 024290          155 CATGRP--EEPIKKVDWEGKVALIQCAKAM--GIQKYV-------FYSIHNCDK---------------HP-EVPLMEIK  207 (269)
Q Consensus       155 ~ag~~~--~~~~~~~n~~~~~~li~a~~~~--~v~r~V-------~~SS~~~~~---------------~~-~~~y~~sK  207 (269)
                      +|+...  +...+++|+.++.+++++|++.  ++++||       |+||..+..               .+ .++|....
T Consensus        79 ~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~~~E  158 (364)
T 2v6g_A           79 VTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLE  158 (364)
T ss_dssp             CCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHHHHHH
T ss_pred             CCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhhHHHH
Confidence            998543  4557789999999999999988  789998       788864311               11 34574433


Q ss_pred             HHHHHHHHhcC-CCEEEEEcCcccccCcc
Q 024290          208 YCTEQFLQDSG-LPHVIIRLWPYWAICST  235 (269)
Q Consensus       208 ~~~e~~~~~~g-i~~~ilrp~~i~g~~~~  235 (269)
                      ..++++.++.+ ++++++||+++||+...
T Consensus       159 ~~~~~~~~~~~~~~~~ilRp~~v~G~~~~  187 (364)
T 2v6g_A          159 DIMLEEVEKKEGLTWSVHRPGNIFGFSPY  187 (364)
T ss_dssp             HHHHHHHTTSTTCEEEEEEESSEECCCTT
T ss_pred             HHHHHHhhcCCCceEEEECCCceeCCCCC
Confidence            33333434466 99999999999998654

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.89  E-value=1.6e-23  Score=184.07  Aligned_cols=141  Identities=18%  Similarity=0.341  Sum_probs=116.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      +++|+||||||+||+++++.|+++|++|++++|+++...+.   +...+++++++|++|++++.++++++|+|||+++..
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~   90 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP   90 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh
Confidence            46899999999999999999999999999999986532221   234589999999999999999999999999999842


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCCCC---CCC----CcHHHHHHHHHHHHHhcCCCEEEEEcCcccc
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK---HPE----VPLMEIKYCTEQFLQDSGLPHVIIRLWPYWA  231 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~~~---~~~----~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g  231 (269)
                              ++.++.+++++|++.| +++||+ |+.+...   .+.    ..| .+|..+|+++++.+++++++||+.+++
T Consensus        91 --------~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~lr~~~~~~  160 (318)
T 2r6j_A           91 --------QILDQFKILEAIKVAGNIKRFLP-SDFGVEEDRINALPPFEALI-ERKRMIRRAIEEANIPYTYVSANCFAS  160 (318)
T ss_dssp             --------GSTTHHHHHHHHHHHCCCCEEEC-SCCSSCTTTCCCCHHHHHHH-HHHHHHHHHHHHTTCCBEEEECCEEHH
T ss_pred             --------hhHHHHHHHHHHHhcCCCCEEEe-eccccCcccccCCCCcchhH-HHHHHHHHHHHhcCCCeEEEEcceehh
Confidence                    2456789999999998 999986 5544221   111    247 999999999999999999999999988


Q ss_pred             cC
Q 024290          232 IC  233 (269)
Q Consensus       232 ~~  233 (269)
                      ++
T Consensus       161 ~~  162 (318)
T 2r6j_A          161 YF  162 (318)
T ss_dssp             HH
T ss_pred             hh
Confidence            64

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.89  E-value=6.1e-23  Score=173.59  Aligned_cols=155  Identities=15%  Similarity=0.054  Sum_probs=123.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHHhc---CccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV---GVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~~---~~d~vi~~  155 (269)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.++..+..++ .+++++.+|++|.+++.++++   ++|+||||
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence            47789999999999999999999999999999999976543332221 367888999999999999885   48999999


Q ss_pred             CCCCC-----------CccchhhcHHHHHHHHHHHHHc----C-CCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh-
Q 024290          156 ATGRP-----------EEPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD-  216 (269)
Q Consensus       156 ag~~~-----------~~~~~~~n~~~~~~li~a~~~~----~-v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~-  216 (269)
                      ||...           ++..+++|+.++.++++++.+.    + .++||++||....  ..+..+|+.+|.++|.+++. 
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~  163 (244)
T 1cyd_A           84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAM  163 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHH
Confidence            99432           1235678999988888877543    5 5799999997653  33456799999999987753 


Q ss_pred             ------cCCCEEEEEcCcccccCc
Q 024290          217 ------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 ------~gi~~~ilrp~~i~g~~~  234 (269)
                            .+++++++|||+++++..
T Consensus       164 a~~~~~~gi~v~~v~pg~v~t~~~  187 (244)
T 1cyd_A          164 AMELGPHKIRVNSVNPTVVLTDMG  187 (244)
T ss_dssp             HHHHGGGTEEEEEEEECCBTTHHH
T ss_pred             HHHhhhcCeEEEEEecCcccCccc
Confidence                  589999999999999753

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.89  E-value=1.6e-22  Score=173.49  Aligned_cols=151  Identities=20%  Similarity=0.148  Sum_probs=124.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+.+...    ...+.++.+|++|++++.++++       ++|+|
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  100 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----DPDIHTVAGDISKPETADRIVREGIERFGRIDSL  100 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            367899999999999999999999999999999999865433    2368899999999999888774       79999


Q ss_pred             EEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC----CCCCCcHHHHHHHHHHH
Q 024290          153 IDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD----KHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       153 i~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~----~~~~~~y~~sK~~~e~~  213 (269)
                      |||||...           ++..+++|+.++.++++++    ++.+.++||++||....    ..+...|+.+|.+++.+
T Consensus       101 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l  180 (260)
T 3un1_A          101 VNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAV  180 (260)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHHHH
Confidence            99999532           2345668999998888876    56677899999997642    23446799999999987


Q ss_pred             HHh-------cCCCEEEEEcCcccccCc
Q 024290          214 LQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.       .|+++++|+||++++++.
T Consensus       181 ~~~la~e~~~~gI~vn~v~PG~v~t~~~  208 (260)
T 3un1_A          181 TRSLAMEFSRSGVRVNAVSPGVIKTPMH  208 (260)
T ss_dssp             HHHHHHHTTTTTEEEEEEEECCBCCTTS
T ss_pred             HHHHHHHhCcCCeEEEEEeecCCCCCCC
Confidence            653       489999999999999864

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.89  E-value=4e-23  Score=185.92  Aligned_cols=152  Identities=20%  Similarity=0.188  Sum_probs=124.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-----Ccccccc-----C-CCEEEEcCCCCCCcHHHHhcC--c
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-----PADFLRD-----W-GATVVNADLSKPETIPATLVG--V  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-----~~~~~~~-----~-~~~~i~~Dl~d~~~l~~~~~~--~  149 (269)
                      +|+||||||+||||++|++.|+++|++|++++|+.+.     .......     . +++++.+|++|.+++.+++++  +
T Consensus        28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  107 (381)
T 1n7h_A           28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP  107 (381)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence            3799999999999999999999999999999997654     1111111     1 678899999999999999875  6


Q ss_pred             cEEEEcCCCCC-------CccchhhcHHHHHHHHHHHHHcCCC-----eEEEecccCCC------------CCCCCcHHH
Q 024290          150 HTVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQ-----KYVFYSIHNCD------------KHPEVPLME  205 (269)
Q Consensus       150 d~vi~~ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~-----r~V~~SS~~~~------------~~~~~~y~~  205 (269)
                      |+|||||+...       +...+++|+.++.++++++++.+++     +|||+||..+.            ..+..+|+.
T Consensus       108 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~  187 (381)
T 1n7h_A          108 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA  187 (381)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHH
Confidence            99999999533       3456778999999999999987765     99999997631            245678999


Q ss_pred             HHHHHHHHHHh----cCCCEEEEEcCcccccCc
Q 024290          206 IKYCTEQFLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       206 sK~~~e~~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      +|.++|.+++.    .+++++++|++++||+..
T Consensus       188 sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~  220 (381)
T 1n7h_A          188 SKCAAHWYTVNYREAYGLFACNGILFNHESPRR  220 (381)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCC
Confidence            99999998764    489999999999999854

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.89  E-value=5.5e-23  Score=176.26  Aligned_cols=155  Identities=14%  Similarity=0.042  Sum_probs=123.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...      ..++.++.+|++|++++.++++      
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF   83 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999997654332211      2357889999999998888774      


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~  209 (269)
                       ++|+||||||...           ++..+++|+.++.++++++.    +.+.++||++||....  ..+..+|+.+|.+
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  163 (263)
T 3ai3_A           84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAA  163 (263)
T ss_dssp             SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHH
Confidence             7999999999432           22456688888888777763    4567899999998653  3445679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+.       .|+++++|+||++++++.
T Consensus       164 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  195 (263)
T 3ai3_A          164 LMMFSKTLATEVIKDNIRVNCINPGLILTPDW  195 (263)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCHHH
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEecCcccCcch
Confidence            9987643       689999999999999853

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.89  E-value=8.2e-23  Score=174.70  Aligned_cols=156  Identities=20%  Similarity=0.194  Sum_probs=120.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC--CCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~--~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+.  .+.++.+|++|.+++.++++       ++|
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   83 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVH   83 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            477899999999999999999999999999999999876655443332  57889999999999888774       799


Q ss_pred             EEEEcCCCCC---------------CccchhhcHHHHHHHHHHHHHc----------CCCeEEEecccCC--CCCCCCcH
Q 024290          151 TVIDCATGRP---------------EEPIKKVDWEGKVALIQCAKAM----------GIQKYVFYSIHNC--DKHPEVPL  203 (269)
Q Consensus       151 ~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~----------~v~r~V~~SS~~~--~~~~~~~y  203 (269)
                      +||||||...               ++..+++|+.++.++++++...          +.++||++||...  ...+...|
T Consensus        84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  163 (257)
T 3tpc_A           84 GLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAY  163 (257)
T ss_dssp             EEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             EEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcch
Confidence            9999999532               1234678999999998888653          4568999999754  34456789


Q ss_pred             HHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          204 MEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       204 ~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+|.+++.+.+.       .|+++++++||++.+++..
T Consensus       164 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~  202 (257)
T 3tpc_A          164 AASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMA  202 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhc
Confidence            9999999987642       7899999999999998654

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.89  E-value=8e-23  Score=178.39  Aligned_cols=155  Identities=19%  Similarity=0.131  Sum_probs=125.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c---CCCEEEEcCCCCCCcHHHHh-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D---WGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~---~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+.++..+...   .   ..+.++++|++|++++++++       
T Consensus        38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  117 (293)
T 3rih_A           38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF  117 (293)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            5788999999999999999999999999999999998765433222   1   25788999999998887776       


Q ss_pred             cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC---CCCCCcHHHHHH
Q 024290          147 VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD---KHPEVPLMEIKY  208 (269)
Q Consensus       147 ~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~---~~~~~~y~~sK~  208 (269)
                      .++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||....   ......|+.+|.
T Consensus       118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKa  197 (293)
T 3rih_A          118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKA  197 (293)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHH
Confidence            37899999999532           2345678999999888877    46677899999997653   344568999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+.       .|+++++|+||+++++..
T Consensus       198 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  230 (293)
T 3rih_A          198 AQLGFMRTAAIELAPRGVTVNAILPGNILTEGL  230 (293)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHH
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEecCCCcCcch
Confidence            99987652       689999999999998743

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.89  E-value=1.3e-22  Score=173.86  Aligned_cols=155  Identities=14%  Similarity=0.030  Sum_probs=123.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC--CCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~--~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...+.  ++.++++|++|++++.++++       ++|
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD   88 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFD   88 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            467899999999999999999999999999999999765433322221  57889999999999888875       799


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cC-CCeEEEecccCCC--CCCCCcHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~-v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~  212 (269)
                      +||||||...           ++..+++|+.++.++++++.+    .+ .++||++||....  ..+...|+.+|.+++.
T Consensus        89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  168 (263)
T 3ak4_A           89 LLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFG  168 (263)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHHH
Confidence            9999999532           223566888888888777643    35 6799999997642  3345679999999998


Q ss_pred             HHHh-------cCCCEEEEEcCcccccCc
Q 024290          213 FLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.       .|+++++|+||++++++.
T Consensus       169 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  197 (263)
T 3ak4_A          169 WTQALAREMAPKNIRVNCVCPGFVKTAMQ  197 (263)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECSBTTHHH
T ss_pred             HHHHHHHHHhHcCeEEEEEecccccChhh
Confidence            7643       599999999999998753

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.89  E-value=5.6e-23  Score=174.98  Aligned_cols=156  Identities=15%  Similarity=0.164  Sum_probs=119.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC-CCCcccccc--CCCEEEEcCCCCCCcHHHHh-------cCc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR-PAPADFLRD--WGATVVNADLSKPETIPATL-------VGV  149 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~-------~~~  149 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|++ ++..+.++.  .++.++++|++|++++.+++       .++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   83 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999999999999999999986 333222222  24778999999999888775       479


Q ss_pred             cEEEEcCCCCC-----------CccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          150 HTVIDCATGRP-----------EEPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       150 d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      |+||||||...           ++..+++|+.++.+++++    +++.+.++||++||...  +..+...|+.+|.+++.
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  163 (249)
T 2ew8_A           84 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIG  163 (249)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHH
Confidence            99999999532           123567888897777776    55667789999999764  33445679999999998


Q ss_pred             HHHh-------cCCCEEEEEcCcccccCcc
Q 024290          213 FLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       213 ~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+.       .|+++++|+||++.+++..
T Consensus       164 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  193 (249)
T 2ew8_A          164 FTRALASDLGKDGITVNAIAPSLVRTATTE  193 (249)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred             HHHHHHHHHHhcCcEEEEEecCcCcCccch
Confidence            7653       5899999999999988643

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.89  E-value=8.2e-23  Score=182.92  Aligned_cols=152  Identities=18%  Similarity=0.185  Sum_probs=120.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-----ccccc-----cCCCEEEEcCCCCCCcHHHHhcC--cc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-----ADFLR-----DWGATVVNADLSKPETIPATLVG--VH  150 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-----~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~~--~d  150 (269)
                      ||+|+||||+||||++++++|+++|++|++++|+.+..     .....     ..+++++.+|++|.+++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            47899999999999999999999999999999975431     11111     13678889999999999998875  79


Q ss_pred             EEEEcCCCCC-------CccchhhcHHHHHHHHHHHHHcCC---CeEEEecccCCC-------------CCCCCcHHHHH
Q 024290          151 TVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGI---QKYVFYSIHNCD-------------KHPEVPLMEIK  207 (269)
Q Consensus       151 ~vi~~ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v---~r~V~~SS~~~~-------------~~~~~~y~~sK  207 (269)
                      +|||||+...       +...+++|+.++.++++++++.++   ++||++||..+.             ..+..+|+.+|
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK  160 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  160 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence            9999998432       223557899999999999999988   799999997431             13456899999


Q ss_pred             HHHHHHHHh----cCCCEEEEEcCcccccCc
Q 024290          208 YCTEQFLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       208 ~~~e~~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      .++|.+++.    .+++++++|++++||+..
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~  191 (372)
T 1db3_A          161 LYAYWITVNYRESYGMYACNGILFNHESPRR  191 (372)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEECCccCCCC
Confidence            999988754    589999999999999853

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.89  E-value=6.1e-23  Score=174.63  Aligned_cols=156  Identities=16%  Similarity=0.117  Sum_probs=121.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCC-EEEEcCCCCCCcHHHHh------cCc
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGA-TVVNADLSKPETIPATL------VGV  149 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~-~~i~~Dl~d~~~l~~~~------~~~  149 (269)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.++..+..++  ..+ .++.+|++|.+++.+++      .++
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   86 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCC
Confidence            457789999999999999999999999999999999976543322211  134 78899999999888776      478


Q ss_pred             cEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCC--CcHHHHHHHH
Q 024290          150 HTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPE--VPLMEIKYCT  210 (269)
Q Consensus       150 d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~--~~y~~sK~~~  210 (269)
                      |+||||||....           +..+++|+.++.++++++    ++.+.++||++||....  ....  .+|+.+|.++
T Consensus        87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~  166 (254)
T 2wsb_A           87 SILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAV  166 (254)
T ss_dssp             CEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHHH
T ss_pred             cEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHHH
Confidence            999999995321           234568888876666654    55677899999997542  2222  6799999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      |.+++.       .|++++++|||++++++.
T Consensus       167 ~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~  197 (254)
T 2wsb_A          167 HQLTRALAAEWAGRGVRVNALAPGYVATEMT  197 (254)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSHHH
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEecccCchhh
Confidence            987643       489999999999999854

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.89  E-value=1e-22  Score=172.35  Aligned_cols=155  Identities=16%  Similarity=0.091  Sum_probs=123.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHHhc---CccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV---GVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~~---~~d~vi~~  155 (269)
                      .+++|+|+||||+|+||+++++.|+++|++|++++|+.++..+...+ .+++++.+|++|.+++.++++   ++|+||||
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence            46789999999999999999999999999999999976543332222 257888999999999998885   58999999


Q ss_pred             CCCCC-----------CccchhhcHHHHHHHHHHHHH----cC-CCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh-
Q 024290          156 ATGRP-----------EEPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD-  216 (269)
Q Consensus       156 ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~-v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~-  216 (269)
                      ||...           ++..+++|+.++.++++++.+    .+ .++||++||....  ..+..+|+.+|.++|.+++. 
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  163 (244)
T 3d3w_A           84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVM  163 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHH
Confidence            99532           124567899998888877754    35 6799999997653  33456799999999987743 


Q ss_pred             ------cCCCEEEEEcCcccccCc
Q 024290          217 ------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 ------~gi~~~ilrp~~i~g~~~  234 (269)
                            .++++++++||++++++.
T Consensus       164 a~e~~~~~i~v~~v~Pg~v~t~~~  187 (244)
T 3d3w_A          164 ALELGPHKIRVNAVNPTVVMTSMG  187 (244)
T ss_dssp             HHHHGGGTEEEEEEEECCBTTTTH
T ss_pred             HHHhcccCeEEEEEEeccccccch
Confidence                  589999999999998764

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.89  E-value=1.1e-23  Score=189.02  Aligned_cols=130  Identities=15%  Similarity=0.158  Sum_probs=114.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC---C
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG---R  159 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~---~  159 (269)
                      |+|||||||||||++|+++|+++|+ +|++++|+                    .|++++.++++++|+|||+|+.   .
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------~d~~~l~~~~~~~d~Vih~a~~~~~~   60 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------TKEEELESALLKADFIVHLAGVNRPE   60 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------CCHHHHHHHHHHCSEEEECCCSBCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------CCHHHHHHHhccCCEEEECCcCCCCC
Confidence            5899999999999999999999998 77776663                    5678889999999999999984   3


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCC-eEEEecccCCCCCCCCcHHHHHHHHHHHHHh----cCCCEEEEEcCcccccCc
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNCDKHPEVPLMEIKYCTEQFLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      .+...+++|+.++.++++++++.+++ +|||+||..+..  .++|+.+|.++|+++++    .+++++++||+++||+..
T Consensus        61 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~  138 (369)
T 3st7_A           61 HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWC  138 (369)
T ss_dssp             CSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCC
Confidence            34567789999999999999999988 999999987654  78999999999998866    799999999999999864


Q ss_pred             c
Q 024290          235 T  235 (269)
Q Consensus       235 ~  235 (269)
                      .
T Consensus       139 ~  139 (369)
T 3st7_A          139 K  139 (369)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.89  E-value=3.6e-23  Score=177.18  Aligned_cols=156  Identities=11%  Similarity=0.028  Sum_probs=122.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHhc-----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+..+       ..++.++.+|++|++++.++++     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999997644332211       1157889999999999988875     


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~  209 (269)
                       ++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||....  ..+...|+.+|.+
T Consensus        84 ~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  163 (260)
T 2z1n_A           84 GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLP  163 (260)
T ss_dssp             TCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHH
T ss_pred             cCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHH
Confidence             5999999999532           2345678998886655554    45677899999997653  3345679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      ++.+.+.       .|+++++|+||++++++..
T Consensus       164 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  196 (260)
T 2z1n_A          164 VIGVVRTLALELAPHGVTVNAVLPSLILTDRVR  196 (260)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEEECCcccchhh
Confidence            9887643       5899999999999998643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.89  E-value=4.3e-23  Score=175.56  Aligned_cols=155  Identities=12%  Similarity=0.058  Sum_probs=123.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+.+|+|+||||+|+||++++++|+++|++|++++|+.+...+..   .  ..++.++.+|++|++++.++++       
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999754332211   1  1257788999999999888875       


Q ss_pred             CccEEEEcCCCCCC----------ccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHH
Q 024290          148 GVHTVIDCATGRPE----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (269)
Q Consensus       148 ~~d~vi~~ag~~~~----------~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e  211 (269)
                      ++|+||||||....          +..+++|+.++.++++++.    +.+.++||++||....  ..+..+|+.+|.++|
T Consensus        88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  167 (255)
T 1fmc_A           88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAAS  167 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHH
Confidence            89999999995322          2356689999888888774    4577899999997643  345568999999999


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccCc
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.       .+++++++|||.+++++.
T Consensus       168 ~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~  197 (255)
T 1fmc_A          168 HLVRNMAFDLGEKNIRVNGIAPGAILTDAL  197 (255)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHH
T ss_pred             HHHHHHHHHhhhcCcEEEEEecccCcchhh
Confidence            87643       489999999999998753

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.88  E-value=9e-23  Score=175.63  Aligned_cols=155  Identities=15%  Similarity=0.100  Sum_probs=123.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+ +...++.++.+|++|.+++.++++       ++|+|
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   91 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKA-LNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAI   91 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHT-TCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-hhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            4678999999999999999999999999999999997654333 223367889999999998888774       78999


Q ss_pred             EEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 024290          153 IDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       153 i~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~  215 (269)
                      |||||...           ++..+++|+.++.++++++    ++.+.++||++||....  ......|+.+|.+++.+.+
T Consensus        92 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~  171 (266)
T 3p19_A           92 VNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISE  171 (266)
T ss_dssp             EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHH
Confidence            99999532           2245678999988866655    45677899999997653  3445679999999997764


Q ss_pred             h-------cCCCEEEEEcCcccccCcc
Q 024290          216 D-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .       .|+++++|+||++.+++..
T Consensus       172 ~la~e~~~~gi~vn~v~PG~v~T~~~~  198 (266)
T 3p19_A          172 NVREEVAASNVRVMTIAPSAVKTELLS  198 (266)
T ss_dssp             HHHHHHGGGTCEEEEEEECSBSSSGGG
T ss_pred             HHHHHhcccCcEEEEEeeCccccchhh
Confidence            2       6899999999999987643

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.88  E-value=8.1e-23  Score=174.57  Aligned_cols=155  Identities=14%  Similarity=0.085  Sum_probs=122.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+..++  ..+.++.+|++|++++.++++       ++|
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   81 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            36789999999999999999999999999999999986543332222  246788999999999888775       799


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHH----HHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~----li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      +||||||...           ++..+++|+.++..    +++.+++.+.++||++||...  ...+...|+.+|.+++.+
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  161 (254)
T 1hdc_A           82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGL  161 (254)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHH
Confidence            9999999532           22356688888774    555566667789999999764  234556899999999987


Q ss_pred             HHh-------cCCCEEEEEcCcccccCc
Q 024290          214 LQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.       .|+++++|+||++++++.
T Consensus       162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~  189 (254)
T 1hdc_A          162 SKLAAVELGTDRIRVNSVHPGMTYTPMT  189 (254)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             HHHHHHHhhhcCeEEEEEecccCcCccc
Confidence            643       589999999999998753

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.88  E-value=5.1e-23  Score=176.18  Aligned_cols=155  Identities=17%  Similarity=0.125  Sum_probs=123.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+..   .  ...+.++.+|++|.+++.++++       
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            477899999999999999999999999999999999765432221   1  1247788999999998887764       


Q ss_pred             CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHH
Q 024290          148 GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (269)
Q Consensus       148 ~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~  209 (269)
                      ++|+||||||...            ++..+++|+.++.++++++    ++.+.++||++||....  ..+...|+.+|.+
T Consensus        91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  170 (260)
T 2zat_A           91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTA  170 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHH
Confidence            7999999999532            1345678999988877776    45677899999998653  3345679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+.       .|+++++++||++.+++.
T Consensus       171 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  202 (260)
T 2zat_A          171 LLGLTKNLAVELAPRNIRVNCLAPGLIKTNFS  202 (260)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSTT
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEECcccCccc
Confidence            9988753       589999999999998764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.88  E-value=1e-22  Score=175.28  Aligned_cols=157  Identities=15%  Similarity=0.100  Sum_probs=123.6

Q ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCCCCCCcHHHHhc----
Q 024290           78 GTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV----  147 (269)
Q Consensus        78 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl~d~~~l~~~~~----  147 (269)
                      ...+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...      ...+.++.+|++|++++.++++    
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   95 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            345788999999999999999999999999999999997544322211      2246788999999998887764    


Q ss_pred             ---CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHH----HHcCCCeEEEecccC-CC--CCCCCcHHHH
Q 024290          148 ---GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHN-CD--KHPEVPLMEI  206 (269)
Q Consensus       148 ---~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~-~~--~~~~~~y~~s  206 (269)
                         ++|+||||||....           +..+++|+.++.++++++    ++.+.++||++||.. ..  ..+...|+.+
T Consensus        96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  175 (267)
T 1vl8_A           96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAAS  175 (267)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHH
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHH
Confidence               79999999995321           235668999998887776    345678999999976 32  3345679999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      |.+++.+++.       .|+++++|+||++.+++.
T Consensus       176 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  210 (267)
T 1vl8_A          176 KGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMT  210 (267)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTT
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccCccccc
Confidence            9999987753       589999999999988753

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=1e-22  Score=172.93  Aligned_cols=155  Identities=10%  Similarity=-0.019  Sum_probs=123.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh---cCccEEEEcC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL---VGVHTVIDCA  156 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~---~~~d~vi~~a  156 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|++++..+..+..++.++.+|++|++++++++   .++|+|||||
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~A   82 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVA   82 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECC
Confidence            3678999999999999999999999999999999998654433331126788999999999887664   5799999999


Q ss_pred             CCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCCC--C-CCCcHHHHHHHHHHHHHh--
Q 024290          157 TGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDK--H-PEVPLMEIKYCTEQFLQD--  216 (269)
Q Consensus       157 g~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~~--~-~~~~y~~sK~~~e~~~~~--  216 (269)
                      |...           ++..+++|+.++.++++++.    +.+.++||++||.....  . +...|+.+|.+++.+++.  
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la  162 (246)
T 2ag5_A           83 GFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVA  162 (246)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHHH
Confidence            9532           22345688899888887764    45678999999976532  2 456799999999987753  


Q ss_pred             -----cCCCEEEEEcCcccccCc
Q 024290          217 -----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 -----~gi~~~ilrp~~i~g~~~  234 (269)
                           .|+++++++||++++++.
T Consensus       163 ~e~~~~gi~v~~v~Pg~v~t~~~  185 (246)
T 2ag5_A          163 ADFIQQGIRCNCVCPGTVDTPSL  185 (246)
T ss_dssp             HHHGGGTEEEEEEEESCEECHHH
T ss_pred             HHhhhcCcEEEEEeeCcCcCcch
Confidence                 489999999999999753

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.88  E-value=8.3e-23  Score=174.39  Aligned_cols=156  Identities=14%  Similarity=0.114  Sum_probs=123.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cc--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+.+...+.   +.  ..++.++.+|++|++++.++++       
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG   89 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999999975433221   11  2257889999999999888774       


Q ss_pred             CccEEEEcCCCCC-C-----------ccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCCCC--CCC--CcHHHHH
Q 024290          148 GVHTVIDCATGRP-E-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDK--HPE--VPLMEIK  207 (269)
Q Consensus       148 ~~d~vi~~ag~~~-~-----------~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~~~--~~~--~~y~~sK  207 (269)
                      ++|+||||||... .           +..+++|+.++.++++++.+    .+.++||++||.....  .+.  ..|+.+|
T Consensus        90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK  169 (260)
T 3awd_A           90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASK  169 (260)
T ss_dssp             CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHH
Confidence            7899999999532 1           23467899999888887753    4678999999975422  222  6799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .++|.+++.       .|++++++|||++++++..
T Consensus       170 ~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~  204 (260)
T 3awd_A          170 AGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR  204 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence            999987753       6899999999999998654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.88  E-value=3.6e-23  Score=177.15  Aligned_cols=155  Identities=15%  Similarity=0.101  Sum_probs=123.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      .+.+|++|||||+|+||++++++|+++|++|++++|+.+...+...+  ..+.++++|++|++++.++++       ++|
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            46789999999999999999999999999999999976544333222  257889999999999888775       799


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc----C-CCeEEEecccCCC--CCCCCcHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~----~-v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~  212 (269)
                      +||||||...           ++..+++|+.++.++++++...    + .++||++||....  .....+|+.+|.+++.
T Consensus        85 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  164 (259)
T 4e6p_A           85 ILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVIS  164 (259)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            9999999532           2344568999999888877432    3 4699999997653  3345679999999998


Q ss_pred             HHHh-------cCCCEEEEEcCcccccCc
Q 024290          213 FLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.       .|+++++++||+++++..
T Consensus       165 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~  193 (259)
T 4e6p_A          165 LTQSAGLDLIKHRINVNAIAPGVVDGEHW  193 (259)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCSTTH
T ss_pred             HHHHHHHHhhhcCCEEEEEEECCCccchh
Confidence            7753       589999999999999854

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.88  E-value=1.1e-22  Score=174.84  Aligned_cols=155  Identities=14%  Similarity=0.096  Sum_probs=121.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHhc-----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+..+       ..++.++.+|++|++++.++++     
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4778999999999999999999999999999999998654332211       2357889999999999888774     


Q ss_pred             --CccEEEEcCCCCCC------------ccchhhcHHHHHHHHH----HHHHcCCCeEEEecccCCC--CCCCCcHHHHH
Q 024290          148 --GVHTVIDCATGRPE------------EPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCD--KHPEVPLMEIK  207 (269)
Q Consensus       148 --~~d~vi~~ag~~~~------------~~~~~~n~~~~~~li~----a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK  207 (269)
                        ++|+||||||....            +..+++|+.++..+++    .+++.+.++||++||....  ..+...|+.+|
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  169 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK  169 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHH
Confidence              78999999995322            2345678887765544    4556677899999997643  33456799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.+.+.       .|+++++|+||++++++.
T Consensus       170 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  203 (267)
T 1iy8_A          170 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMV  203 (267)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcch
Confidence            999987652       689999999999998753

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.88  E-value=6.7e-23  Score=177.05  Aligned_cols=154  Identities=14%  Similarity=0.052  Sum_probs=120.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc--------cCCCEEEEcCCCCCCcHHHHhc----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--------DWGATVVNADLSKPETIPATLV----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--------~~~~~~i~~Dl~d~~~l~~~~~----  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+..+        ..++.++.+|++|++++.++++    
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999997544322111        1247789999999999888875    


Q ss_pred             ---CccEEEEcCCCCC---------------CccchhhcHHHHHHHHHHHHHc----CCCeEEEecccCC-C--CCCCCc
Q 024290          148 ---GVHTVIDCATGRP---------------EEPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNC-D--KHPEVP  202 (269)
Q Consensus       148 ---~~d~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~----~v~r~V~~SS~~~-~--~~~~~~  202 (269)
                         ++|+||||||...               ++..+++|+.++.++++++.+.    + ++||++||... .  ..+...
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~  161 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPY  161 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHH
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccH
Confidence               8999999998421               1234678999988888877543    6 89999999865 2  234457


Q ss_pred             HHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          203 LMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       203 y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      |+.+|.+++.+.+.       .|+++++|+||++++++.
T Consensus       162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  200 (278)
T 1spx_A          162 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFG  200 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccc
Confidence            99999999987643       689999999999998864

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.88  E-value=1.6e-22  Score=171.77  Aligned_cols=156  Identities=13%  Similarity=0.087  Sum_probs=124.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.++..+...+.++.++.+|++|+++++++++       ++|+|
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   81 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV   81 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            36789999999999999999999999999999999986544443333358899999999998887764       58999


Q ss_pred             EEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCCC-CCCCCcHHHHHHHHHHHHHh
Q 024290          153 IDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD-KHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       153 i~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~~-~~~~~~y~~sK~~~e~~~~~  216 (269)
                      |||||...           ++..+++|+.++.++++++.+    .+.++||++||.... ......|+.+|.+++.+.+.
T Consensus        82 vn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~Y~asK~a~~~~~~~  161 (245)
T 1uls_A           82 VHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRT  161 (245)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCCCchhHHHHHHHHHHHHHH
Confidence            99999532           234567899999888877754    366799999998632 23345799999999877643


Q ss_pred             -------cCCCEEEEEcCcccccCcc
Q 024290          217 -------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       217 -------~gi~~~ilrp~~i~g~~~~  235 (269)
                             .|+++++|+||++.+++..
T Consensus       162 la~e~~~~gi~v~~v~PG~v~t~~~~  187 (245)
T 1uls_A          162 LALELGRWGIRVNTLAPGFIETRMTA  187 (245)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCTTTS
T ss_pred             HHHHHhHhCeEEEEEEeCcCcCcchh
Confidence                   6899999999999887643

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.88  E-value=1.8e-22  Score=173.12  Aligned_cols=155  Identities=18%  Similarity=0.093  Sum_probs=122.4

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccE
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHT  151 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~  151 (269)
                      +.+++|++|||||+|+||+++++.|+++|++|++++|+.++..+.+.+.++.++.+|++|++++.++++       ++|+
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            357789999999999999999999999999999999987665554555578999999999998887763       6899


Q ss_pred             EEEcCCCCC----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH
Q 024290          152 VIDCATGRP----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       152 vi~~ag~~~----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~  215 (269)
                      ||||||...          ++..+++|+.++.++++++.    +.+.++||++||...  +..+...|+.+|.+++.+.+
T Consensus       103 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~  182 (260)
T 3gem_A          103 VVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTL  182 (260)
T ss_dssp             EEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHH
T ss_pred             EEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHH
Confidence            999999432          12456789999888887764    446679999999764  33445679999999998764


Q ss_pred             h------cCCCEEEEEcCcccccC
Q 024290          216 D------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 ~------~gi~~~ilrp~~i~g~~  233 (269)
                      .      .++++++++||.+.++.
T Consensus       183 ~la~e~~~~Irvn~v~PG~v~t~~  206 (260)
T 3gem_A          183 SFAARFAPLVKVNGIAPALLMFQP  206 (260)
T ss_dssp             HHHHHHTTTCEEEEEEECTTCC--
T ss_pred             HHHHHHCCCCEEEEEeecccccCC
Confidence            3      35999999999998764

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.88  E-value=4.7e-23  Score=178.28  Aligned_cols=156  Identities=15%  Similarity=0.049  Sum_probs=121.5

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc-CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD-WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~-~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +++++|+++||||+|+||+++++.|+++|++|++++|+.++..+..   .. .++.++.+|++|+++++++++       
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            3477899999999999999999999999999999999764432221   11 157788999999998887764       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCC----CeEEEecccCCC--CCCCC-cHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGI----QKYVFYSIHNCD--KHPEV-PLME  205 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v----~r~V~~SS~~~~--~~~~~-~y~~  205 (269)
                      ++|+||||||...           ++..+++|+.++.++++++.    +.+.    ++||++||....  ..... .|+.
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~a  184 (276)
T 2b4q_A          105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGP  184 (276)
T ss_dssp             CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHH
Confidence            7999999999422           12456789999877776653    4454    799999997642  23345 8999


Q ss_pred             HHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          206 IKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       206 sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +|.+++.+.+.       .|+++++|+||++.+++.
T Consensus       185 sK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~  220 (276)
T 2b4q_A          185 SKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMT  220 (276)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTT
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcch
Confidence            99999987643       589999999999998764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.88  E-value=1.1e-23  Score=185.16  Aligned_cols=142  Identities=24%  Similarity=0.388  Sum_probs=115.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC-CC----Cccc---cccCCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR-PA----PADF---LRDWGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~-~~----~~~~---~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      +|+|+||||||+||+++++.|+++|++|++++|++ ..    ..+.   +...+++++.+|++|++++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~   83 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS   83 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            56899999999999999999999999999999986 21    1111   1245799999999999999999999999999


Q ss_pred             cCCCCCCccchhhcHHHHHHHHHHHHHcC-CCeEEEecccCCCC---CC----CCcHHHHHHHHHHHHHhcCCCEEEEEc
Q 024290          155 CATGRPEEPIKKVDWEGKVALIQCAKAMG-IQKYVFYSIHNCDK---HP----EVPLMEIKYCTEQFLQDSGLPHVIIRL  226 (269)
Q Consensus       155 ~ag~~~~~~~~~~n~~~~~~li~a~~~~~-v~r~V~~SS~~~~~---~~----~~~y~~sK~~~e~~~~~~gi~~~ilrp  226 (269)
                      +++...        +.++.+++++|++.| +++||+ |+.+...   .+    ...| .+|..+|+++++.++++++|||
T Consensus        84 ~a~~~~--------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~lrp  153 (321)
T 3c1o_A           84 ALPFPM--------ISSQIHIINAIKAAGNIKRFLP-SDFGCEEDRIKPLPPFESVL-EKKRIIRRAIEAAALPYTYVSA  153 (321)
T ss_dssp             CCCGGG--------SGGGHHHHHHHHHHCCCCEEEC-SCCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHHHTCCBEEEEC
T ss_pred             CCCccc--------hhhHHHHHHHHHHhCCccEEec-cccccCccccccCCCcchHH-HHHHHHHHHHHHcCCCeEEEEe
Confidence            998421        456689999999998 999984 5444211   11    2358 9999999999999999999999


Q ss_pred             CcccccCc
Q 024290          227 WPYWAICS  234 (269)
Q Consensus       227 ~~i~g~~~  234 (269)
                      +.+++++.
T Consensus       154 ~~~~~~~~  161 (321)
T 3c1o_A          154 NCFGAYFV  161 (321)
T ss_dssp             CEEHHHHH
T ss_pred             ceeccccc
Confidence            99998753

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.88  E-value=2.1e-22  Score=174.83  Aligned_cols=156  Identities=17%  Similarity=0.097  Sum_probs=123.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+.+|+++||||+|+||+++++.|+++|++|++++|+.+...+..   ..  ..+.++++|++|++++.++++       
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG  104 (283)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999865433222   11  257789999999998887764       


Q ss_pred             CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC----CCCCCcHHHHH
Q 024290          148 GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD----KHPEVPLMEIK  207 (269)
Q Consensus       148 ~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~----~~~~~~y~~sK  207 (269)
                      ++|+||||||...            ++..+++|+.++.++++++    ++.+.++||++||....    ..+...|+.+|
T Consensus       105 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asK  184 (283)
T 3v8b_A          105 HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATK  184 (283)
T ss_dssp             CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHH
Confidence            7999999999531            1345678999998888887    55677899999998652    23456799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+++.+.+.       .|+++++|+||++.+++..
T Consensus       185 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  219 (283)
T 3v8b_A          185 AAQVAIVQQLALELGKHHIRVNAVCPGAIETNISD  219 (283)
T ss_dssp             HHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTC
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccc
Confidence            999987753       6899999999999988654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.88  E-value=1.3e-22  Score=170.72  Aligned_cols=153  Identities=12%  Similarity=0.073  Sum_probs=114.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHHhc-------CccEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV-------GVHTVI  153 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~~-------~~d~vi  153 (269)
                      ++|+|+||||+|+||++++++|+++|++|++++|+.++..+...+ .++.++.+|++|.+++.++++       ++|+||
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            467899999999999999999999999999999975543332222 168899999999988877763       789999


Q ss_pred             EcCCCCCC-----------ccchhhcHHHHHHHH----HHHHHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH-
Q 024290          154 DCATGRPE-----------EPIKKVDWEGKVALI----QCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ-  215 (269)
Q Consensus       154 ~~ag~~~~-----------~~~~~~n~~~~~~li----~a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~-  215 (269)
                      ||||....           +..+++|+.++.+++    +.+++.+.++||++||....  ..+...|+.+|.+++.+.+ 
T Consensus        84 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  163 (234)
T 2ehd_A           84 NNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGA  163 (234)
T ss_dssp             ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHHHHH
Confidence            99995321           234568888876544    44566677899999998653  3345679999999887754 


Q ss_pred             ------hcCCCEEEEEcCcccccCc
Q 024290          216 ------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ------~~gi~~~ilrp~~i~g~~~  234 (269)
                            ..|+++++++||++.+++.
T Consensus       164 la~e~~~~gi~v~~v~Pg~v~t~~~  188 (234)
T 2ehd_A          164 AMLDLREANVRVVNVLPGSVDTGFA  188 (234)
T ss_dssp             HHHHHGGGTEEEEEEECC-------
T ss_pred             HHHHHhhcCcEEEEEEeCCCcCCcc
Confidence                  2689999999999988753

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.88  E-value=1.5e-22  Score=173.31  Aligned_cols=156  Identities=13%  Similarity=0.116  Sum_probs=124.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...+  .++.++.+|++|++++.++++       ++|
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   88 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD   88 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence            46789999999999999999999999999999999987654433222  357889999999999988875       899


Q ss_pred             EEEEcCCCCC-----------------CccchhhcHHHHHHHHHHHHHc----------CCCeEEEecccCC--CCCCCC
Q 024290          151 TVIDCATGRP-----------------EEPIKKVDWEGKVALIQCAKAM----------GIQKYVFYSIHNC--DKHPEV  201 (269)
Q Consensus       151 ~vi~~ag~~~-----------------~~~~~~~n~~~~~~li~a~~~~----------~v~r~V~~SS~~~--~~~~~~  201 (269)
                      +||||||...                 ++..+++|+.++.++++++.+.          +.++||++||...  ...+..
T Consensus        89 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  168 (265)
T 2o23_A           89 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA  168 (265)
T ss_dssp             EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred             EEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCc
Confidence            9999999532                 1234568999999998888654          5679999999754  344566


Q ss_pred             cHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          202 PLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       202 ~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .|+.+|.+++.+.+.       .|+++++++||++.+++..
T Consensus       169 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  209 (265)
T 2o23_A          169 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT  209 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccc
Confidence            899999999877642       5899999999999987643

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.88  E-value=1.1e-22  Score=174.01  Aligned_cols=156  Identities=19%  Similarity=0.157  Sum_probs=122.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc------------CCCEEEEcCCCCCCcHHHHhc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD------------WGATVVNADLSKPETIPATLV  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~------------~~~~~i~~Dl~d~~~l~~~~~  147 (269)
                      .|++|+|+||||+|+||+++++.|+++|++|++++|+.+...+....            .++.++.+|++|.+++.++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999975443222111            357899999999998887774


Q ss_pred             -------Cc-cEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHHc----C-CCeEEEecccCC--CCCCCC
Q 024290          148 -------GV-HTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNC--DKHPEV  201 (269)
Q Consensus       148 -------~~-d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~~----~-v~r~V~~SS~~~--~~~~~~  201 (269)
                             ++ |+||||||....           +..+++|+.++.++++++.+.    + .++||++||...  +..+..
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  163 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQT  163 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBH
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCCh
Confidence                   34 999999995321           235678999999988887543    4 569999999743  344567


Q ss_pred             cHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          202 PLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       202 ~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .|+.+|.+++.+++.       .|++++++|||++++++..
T Consensus       164 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  204 (264)
T 2pd6_A          164 NYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ  204 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchh
Confidence            899999999887643       6899999999999998644

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.88  E-value=1e-22  Score=172.57  Aligned_cols=156  Identities=17%  Similarity=0.098  Sum_probs=123.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.++..+...      ...+.++.+|++|++++.++++      
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999997544322111      2357889999999999888875      


Q ss_pred             -CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                       ++|+||||||....           +..+++|+.++.++++++    ++.+.++||++||...  ...+..+|+.+|.+
T Consensus        84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  163 (248)
T 2pnf_A           84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAG  163 (248)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHHH
Confidence             79999999995321           245678899986665544    5567789999999743  34456789999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      ++.+.+.       .++++++++||++++++..
T Consensus       164 ~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~  196 (248)
T 2pnf_A          164 LIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA  196 (248)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeceecCchhh
Confidence            9987643       5899999999999988644

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=1.2e-22  Score=175.20  Aligned_cols=154  Identities=16%  Similarity=0.188  Sum_probs=122.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHHhc-------CccE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV-------GVHT  151 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~~-------~~d~  151 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+++...+...+ .++.++++|++|+++++++++       ++|+
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47789999999999999999999999999999999976543332222 247889999999999888764       7899


Q ss_pred             EEEcCCCCC------------CccchhhcHHHHHHHHHHHHH---cCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 024290          152 VIDCATGRP------------EEPIKKVDWEGKVALIQCAKA---MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       152 vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~---~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~  214 (269)
                      ||||||...            ++..+++|+.++.++++++..   .+.++||++||...  ......+|+.+|.+++.+.
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~  165 (270)
T 1yde_A           86 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMT  165 (270)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHHHHHHHHH
Confidence            999999532            134567899999998888753   12479999999743  3345568999999999876


Q ss_pred             Hh-------cCCCEEEEEcCcccccC
Q 024290          215 QD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       215 ~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.       .|+++++|+||++++++
T Consensus       166 ~~la~e~~~~gi~vn~v~Pg~v~t~~  191 (270)
T 1yde_A          166 KALALDESPYGVRVNCISPGNIWTPL  191 (270)
T ss_dssp             HHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             HHHHHHhhhhCcEEEEEEeCccccch
Confidence            43       68999999999999975

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.88  E-value=1.1e-22  Score=174.00  Aligned_cols=155  Identities=14%  Similarity=0.053  Sum_probs=124.5

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.+...+...     ...+.++.+|++|.++++++++      
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45788999999999999999999999999999999997654332221     1357889999999998887764      


Q ss_pred             -CccEEEEcCCCCC----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 -GVHTVIDCATGRP----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 -~~d~vi~~ag~~~----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                       ++|+||||||...          ++..+++|+.++.++++++    ++.+.++||++||...  ...+...|+.+|.++
T Consensus        88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  167 (256)
T 3gaf_A           88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAV  167 (256)
T ss_dssp             SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHH
Confidence             7999999999532          2345678999998888876    4556679999999765  334456799999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccC
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+.+.       .|++++.++||.+.+++
T Consensus       168 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  197 (256)
T 3gaf_A          168 NHLTRNIAFDVGPMGIRVNAIAPGAIKTDA  197 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred             HHHHHHHHHHHhhhCcEEEEEEEccccCch
Confidence            987643       58999999999999875

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.88  E-value=1.4e-22  Score=172.02  Aligned_cols=153  Identities=15%  Similarity=0.065  Sum_probs=119.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc----c--cCCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----R--DWGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~----~--~~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      +|+++||||+|+||++++++|+++|++|++++|+.++..+..    .  ..++.++.+|++|++++.++++       ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999754432211    1  1247889999999999888875       79


Q ss_pred             cEEEEcCCCCCC--------------ccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHH
Q 024290          150 HTVIDCATGRPE--------------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (269)
Q Consensus       150 d~vi~~ag~~~~--------------~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~  209 (269)
                      |+||||||....              +..+++|+.++.++++++    ++.+.++||++||....  ..+...|+.+|.+
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  161 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGA  161 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHHH
Confidence            999999985321              234567888876655554    45577899999997542  3445689999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      ++.+++.       .|++++++|||++++++..
T Consensus       162 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  194 (250)
T 2cfc_A          162 VLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQ  194 (250)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTH
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeCcCccCccc
Confidence            9987643       4899999999999998654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.88  E-value=4.1e-23  Score=175.29  Aligned_cols=144  Identities=13%  Similarity=0.108  Sum_probs=117.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc----CccEEEEcCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV----GVHTVIDCATG  158 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~----~~d~vi~~ag~  158 (269)
                      ||+|+||||+|+||+++++.|+++|++|++++|+.++...        .+.+|++|.+++.++++    ++|+||||||.
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~   72 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGV   72 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------cccCCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence            4689999999999999999999999999999998654322        15689999888888875    89999999995


Q ss_pred             CC----CccchhhcHHHHHHHHHHHHHc----CCCeEEEecccCCCC----------------------------CCCCc
Q 024290          159 RP----EEPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCDK----------------------------HPEVP  202 (269)
Q Consensus       159 ~~----~~~~~~~n~~~~~~li~a~~~~----~v~r~V~~SS~~~~~----------------------------~~~~~  202 (269)
                      ..    ++..+++|+.++.++++++.+.    +.++||++||.....                            .+...
T Consensus        73 ~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (255)
T 2dkn_A           73 GVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLA  152 (255)
T ss_dssp             CTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHH
T ss_pred             CCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchh
Confidence            43    3566789999999999977654    668999999976532                            23346


Q ss_pred             HHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          203 LMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       203 y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      |+.+|.++|.+++.       .|++++++|||++++++.
T Consensus       153 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~  191 (255)
T 2dkn_A          153 YAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL  191 (255)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh
Confidence            99999999987753       589999999999999854

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.88  E-value=1.6e-22  Score=174.90  Aligned_cols=155  Identities=18%  Similarity=0.116  Sum_probs=123.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cc--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|++++..+.   +.  ...+.++.+|++|++++.++++       
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999986543222   11  1247889999999998887764       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc------CCCeEEEecccCC--CCCCCCcHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM------GIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~------~v~r~V~~SS~~~--~~~~~~~y~~sK~  208 (269)
                      ++|+||||||...           ++..+++|+.++.++++++.+.      +.++||++||...  ...+...|+.+|.
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  178 (277)
T 2rhc_B           99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH  178 (277)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHH
Confidence            7999999999532           1345678999999988886543      5679999999754  2344567999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+.       .|+++++|+||++++++.
T Consensus       179 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  211 (277)
T 2rhc_B          179 GVVGFTKALGLELARTGITVNAVCPGFVETPMA  211 (277)
T ss_dssp             HHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHH
T ss_pred             HHHHHHHHHHHHHHHhCcEEEEEecCcCcCchh
Confidence            99987653       589999999999998753

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.88  E-value=2.1e-22  Score=173.72  Aligned_cols=155  Identities=16%  Similarity=0.057  Sum_probs=120.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHh--------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATL--------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~--------  146 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+..+     ..++.++.+|++|++++.+++        
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   97 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4778999999999999999999999999999999998654332211     125788999999999888776        


Q ss_pred             cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHH
Q 024290          147 VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (269)
Q Consensus       147 ~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~  209 (269)
                      .++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||....  ..+...|+.+|.+
T Consensus        98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  177 (273)
T 1ae1_A           98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGA  177 (273)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHH
Confidence            57999999999532           2234568999988888877    34567899999998653  3445679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+.       .|+++++|+||++++++.
T Consensus       178 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  209 (273)
T 1ae1_A          178 INQMTKSLACEWAKDNIRVNSVAPGVILTPLV  209 (273)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBC----
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeCCCcCchh
Confidence            9987643       599999999999999864

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.88  E-value=2.2e-22  Score=170.44  Aligned_cols=155  Identities=10%  Similarity=0.084  Sum_probs=116.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-eCCCCCCccc---cc--cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~---~~--~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+|+||++++++|+++|++|+++ .|+++...+.   +.  ...+.++.+|++|++++.++++      
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3667899999999999999999999999999999 4554332221   11  2357889999999999888775      


Q ss_pred             -CccEEEEcCCCC-----------CCccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGR-----------PEEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~-----------~~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                       ++|+||||||..           .++..+++|+.++.++++++.    +.+.++||++||...  +..+..+|+.+|.+
T Consensus        82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  161 (247)
T 2hq1_A           82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAG  161 (247)
T ss_dssp             SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHH
Confidence             799999999842           234567799999888777764    457789999999753  33445689999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+++.       .++++++++||.+.+++.
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  193 (247)
T 2hq1_A          162 LIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMT  193 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEEEEEEeccch
Confidence            9987653       489999999999988753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.88  E-value=8.2e-23  Score=173.97  Aligned_cols=157  Identities=13%  Similarity=0.078  Sum_probs=125.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      +.+++|+++||||+|+||+++++.|+++|++|++++|+.+...+..+.  .....+++|++|+++++++++       ++
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            457789999999999999999999999999999999976543332211  246789999999999888774       79


Q ss_pred             cEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          150 HTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       150 d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      |++|||||...           ++..+++|+.++.++++++.    +.+.++||++||...  +..+...|+.+|.+++.
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  164 (248)
T 3op4_A           85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIG  164 (248)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHH
Confidence            99999999532           23456789999888888764    356679999999753  44556789999999988


Q ss_pred             HHHh-------cCCCEEEEEcCcccccCcc
Q 024290          213 FLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       213 ~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+.       .|+++++++||.+.+++..
T Consensus       165 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~  194 (248)
T 3op4_A          165 FTKSMAREVASRGVTVNTVAPGFIETDMTK  194 (248)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSTTTT
T ss_pred             HHHHHHHHHHHhCeEEEEEeeCCCCCchhh
Confidence            7642       6899999999999987644

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.88  E-value=3e-22  Score=171.12  Aligned_cols=152  Identities=13%  Similarity=0.044  Sum_probs=121.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC-CCEEEEcCCCCCCcHHHHhc-------CccE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPATLV-------GVHT  151 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~-~~~~i~~Dl~d~~~l~~~~~-------~~d~  151 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+. .+..++. . .++++|++|++++.++++       ++|+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   80 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDV   80 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3678999999999999999999999999999999998665 3322221 3 788999999988887764       7899


Q ss_pred             EEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 024290          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       152 vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~  214 (269)
                      ||||||...           ++..+++|+.++.++++++.    +.+.++||++||....  ..+...|+.+|.+++.+.
T Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  160 (256)
T 2d1y_A           81 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLT  160 (256)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHHH
Confidence            999999432           13456789999988887764    4567899999997642  344567999999999876


Q ss_pred             Hh-------cCCCEEEEEcCcccccC
Q 024290          215 QD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       215 ~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.       .|+++++++||.+.+++
T Consensus       161 ~~la~e~~~~gi~v~~v~Pg~v~t~~  186 (256)
T 2d1y_A          161 RSLALDLAPLRIRVNAVAPGAIATEA  186 (256)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             HHHHHHHhhcCeEEEEEeeCCccCch
Confidence            53       58999999999998875

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.87  E-value=1.3e-22  Score=174.29  Aligned_cols=155  Identities=18%  Similarity=0.147  Sum_probs=123.4

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC-CCCCCccc---cc--cCCCEEEEcCCCCCCcHHHHhc-----
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADF---LR--DWGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R-~~~~~~~~---~~--~~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      +.+++|+|+||||+|+||++++++|+++|++|++++| +.+...+.   +.  ..++.++.+|++|++++.++++     
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3477899999999999999999999999999999999 43322211   11  2357789999999999888875     


Q ss_pred             --CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCCC---CCCCCcHHHHHH
Q 024290          148 --GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCD---KHPEVPLMEIKY  208 (269)
Q Consensus       148 --~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~~---~~~~~~y~~sK~  208 (269)
                        ++|+||||||....           +..+++|+.++.++++++.+.   + ++||++||....   ..+..+|+.+|.
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~Y~~sK~  175 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPNHALYAGSKA  175 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCSCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCCCchHHHHHH
Confidence              79999999995322           345678999999999988765   4 699999997643   344567999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++|.+++.       .++++++++||.+++++.
T Consensus       176 a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~  208 (274)
T 1ja9_A          176 AVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMF  208 (274)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcccccch
Confidence            99987753       489999999999998753

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.87  E-value=8.4e-23  Score=176.93  Aligned_cols=156  Identities=16%  Similarity=0.122  Sum_probs=123.5

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cccC-----CCEEEEcCCCCCCcHHHHhc---
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDW-----GATVVNADLSKPETIPATLV---  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~-----~~~~i~~Dl~d~~~l~~~~~---  147 (269)
                      ..+++|+++||||+|+||+++++.|+++|++|++++|+.+...+.   +...     .+.++.+|++|++++.++++   
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            357789999999999999999999999999999999986543222   1111     46788999999998887764   


Q ss_pred             ----CccEEEEcCCC-CC-----------CccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHH
Q 024290          148 ----GVHTVIDCATG-RP-----------EEPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLME  205 (269)
Q Consensus       148 ----~~d~vi~~ag~-~~-----------~~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~  205 (269)
                          ++|+||||||. ..           ++..+++|+.++.++++++..    .+.++||++||...  ...+..+|+.
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  166 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGV  166 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHH
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHH
Confidence                68999999995 21           234567899999988887643    45569999999754  4455678999


Q ss_pred             HHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          206 IKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       206 sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +|.+++.+.+.       .|+++++++||++++++.
T Consensus       167 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  202 (281)
T 3svt_A          167 TKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLV  202 (281)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcch
Confidence            99999988753       579999999999998754

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.87  E-value=3.8e-22  Score=169.72  Aligned_cols=154  Identities=15%  Similarity=0.124  Sum_probs=121.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+..+     ..++.++.+|++|++++.++++       
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999999999999999999997654332211     1257889999999998887764       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~  210 (269)
                      ++|+||||||...           ++..+++|+.++.++++++.    +.+ ++||++||....  ......|+.+|.++
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~  162 (247)
T 2jah_A           84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGV  162 (247)
T ss_dssp             CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHH
Confidence            7999999999432           12356789999888887764    445 799999997643  33456799999999


Q ss_pred             HHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          211 EQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.+       ..|+++++|+||++.+++.
T Consensus       163 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  193 (247)
T 2jah_A          163 NAFSETLRQEVTERGVRVVVIEPGTTDTELR  193 (247)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBSSSGG
T ss_pred             HHHHHHHHHHhcccCcEEEEEECCCCCCcch
Confidence            87764       2699999999999998764

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.87  E-value=2.2e-22  Score=188.49  Aligned_cols=142  Identities=20%  Similarity=0.148  Sum_probs=114.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC--
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP--  160 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~--  160 (269)
                      +|+||||||+||||++|++.|+++|++|++++|+..+.         ..+.+|+.+  .+.++++++|+|||||+...  
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------~~v~~d~~~--~~~~~l~~~D~Vih~A~~~~~~  215 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------GKRFWDPLN--PASDLLDGADVLVHLAGEPIFG  215 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------TCEECCTTS--CCTTTTTTCSEEEECCCC----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------cceeecccc--hhHHhcCCCCEEEECCCCcccc
Confidence            68999999999999999999999999999999986543         226778864  34667789999999999531  


Q ss_pred             ------CccchhhcHHHHHHHHHH-HHHcCCCeEEEecccCCCC-------------CCCCcHHHHHHHHHHHH---Hhc
Q 024290          161 ------EEPIKKVDWEGKVALIQC-AKAMGIQKYVFYSIHNCDK-------------HPEVPLMEIKYCTEQFL---QDS  217 (269)
Q Consensus       161 ------~~~~~~~n~~~~~~li~a-~~~~~v~r~V~~SS~~~~~-------------~~~~~y~~sK~~~e~~~---~~~  217 (269)
                            ...++++|+.++.+|+++ +++.++++|||+||.++..             .+...|+..|...|.++   +..
T Consensus       216 ~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~~~~~  295 (516)
T 3oh8_A          216 RFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDA  295 (516)
T ss_dssp             -CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHHHHHT
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHHHHHhC
Confidence                  233567899999999999 6677889999999965421             13456888898887654   468


Q ss_pred             CCCEEEEEcCcccccCcc
Q 024290          218 GLPHVIIRLWPYWAICST  235 (269)
Q Consensus       218 gi~~~ilrp~~i~g~~~~  235 (269)
                      |++++++||+++||+...
T Consensus       296 gi~~~ilRp~~v~Gp~~~  313 (516)
T 3oh8_A          296 GKRVAFIRTGVALSGRGG  313 (516)
T ss_dssp             TCEEEEEEECEEEBTTBS
T ss_pred             CCCEEEEEeeEEECCCCC
Confidence            999999999999998643

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.87  E-value=1e-22  Score=177.26  Aligned_cols=156  Identities=17%  Similarity=0.099  Sum_probs=126.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC--CCEEEEcCCCCCCcHHHHhc---CccEEEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATLV---GVHTVID  154 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~--~~~~i~~Dl~d~~~l~~~~~---~~d~vi~  154 (269)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.++..+...+.  ++.++.+|++|.+++.++++   ++|+|||
T Consensus        13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~   92 (291)
T 3rd5_A           13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN   92 (291)
T ss_dssp             CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence            578899999999999999999999999999999999865544333322  57889999999999998886   6799999


Q ss_pred             cCCC---------CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC---------------CCCCcHHHHHHHH
Q 024290          155 CATG---------RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK---------------HPEVPLMEIKYCT  210 (269)
Q Consensus       155 ~ag~---------~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~---------------~~~~~y~~sK~~~  210 (269)
                      |||.         ..++..+++|+.++.++++++.....++||++||.....               .+...|+.+|.++
T Consensus        93 nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~  172 (291)
T 3rd5_A           93 NAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLAN  172 (291)
T ss_dssp             CCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHH
T ss_pred             CCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHH
Confidence            9994         234567789999999999999888778999999975421               1223699999999


Q ss_pred             HHHHHh-------cC--CCEEEEEcCcccccCcc
Q 024290          211 EQFLQD-------SG--LPHVIIRLWPYWAICST  235 (269)
Q Consensus       211 e~~~~~-------~g--i~~~ilrp~~i~g~~~~  235 (269)
                      +.+.+.       .|  +++++++||.+.+++..
T Consensus       173 ~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~  206 (291)
T 3rd5_A          173 LLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQG  206 (291)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--
T ss_pred             HHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccc
Confidence            877642       45  99999999999887654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.87  E-value=2.2e-22  Score=171.03  Aligned_cols=155  Identities=14%  Similarity=0.122  Sum_probs=123.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Ccc---cccc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PAD---FLRD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~---~~~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +++|+++||||+|+||+++++.|+++|++|++++|+... ..+   .+..  ..+.++++|++|.++++++++       
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            456899999999999999999999999999999885422 111   1111  257789999999999888774       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||...  +..+..+|+.+|.++
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGV  161 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHH
Confidence            7899999999532           2346678999999988888    5567789999999753  345567899999999


Q ss_pred             HHHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          211 EQFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       211 e~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+.+       ..|+++++++||++++++..
T Consensus       162 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~  193 (246)
T 3osu_A          162 IGLTKSAARELASRGITVNAVAPGFIVSDMTD  193 (246)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBGGGCCS
T ss_pred             HHHHHHHHHHhcccCeEEEEEEECCCcCCccc
Confidence            98764       36899999999999998654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.87  E-value=3.3e-22  Score=170.86  Aligned_cols=149  Identities=17%  Similarity=0.137  Sum_probs=118.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.++..      .+.++++|++|+++++++++       ++|+|
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l   91 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------GFLAVKCDITDTEQVEQAYKEIEETHGPVEVL   91 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------cceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            477899999999999999999999999999999999765432      37889999999998887764       57999


Q ss_pred             EEcCCCC-----------CCccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCCCC--CCCcHHHHHHHHHHHHH
Q 024290          153 IDCATGR-----------PEEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDKH--PEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       153 i~~ag~~-----------~~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~~~--~~~~y~~sK~~~e~~~~  215 (269)
                      |||||..           .++..+++|+.++.++++++.    +.+.++||++||......  ....|+.+|.+++.+.+
T Consensus        92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  171 (253)
T 2nm0_A           92 IANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFAR  171 (253)
T ss_dssp             EEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHH
Confidence            9999942           234566799999988887664    346789999999865332  24579999999998765


Q ss_pred             h-------cCCCEEEEEcCcccccCc
Q 024290          216 D-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .       .|+++++++||++.+++.
T Consensus       172 ~la~e~~~~gi~vn~v~PG~v~T~~~  197 (253)
T 2nm0_A          172 SLARELGSRNITFNVVAPGFVDTDMT  197 (253)
T ss_dssp             HHHHHHCSSSEEEEEEEECSBCC---
T ss_pred             HHHHHhhhcCeEEEEEEeCcCcCcch
Confidence            3       689999999999988754

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.87  E-value=1.2e-22  Score=175.24  Aligned_cols=153  Identities=12%  Similarity=0.037  Sum_probs=119.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC-CCCCCccccc------cCCCEEEEcCCCCC----CcHHHHhc-
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADFLR------DWGATVVNADLSKP----ETIPATLV-  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R-~~~~~~~~~~------~~~~~~i~~Dl~d~----~~l~~~~~-  147 (269)
                      .|++|+++||||+|+||+++++.|+++|++|++++| +.+...+..+      ...+.++.+|++|.    +++.++++ 
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            367789999999999999999999999999999999 6443322111      23578899999999    88777764 


Q ss_pred             ------CccEEEEcCCCCC----------------------CccchhhcHHHHHHHHHHHHHc---CC------CeEEEe
Q 024290          148 ------GVHTVIDCATGRP----------------------EEPIKKVDWEGKVALIQCAKAM---GI------QKYVFY  190 (269)
Q Consensus       148 ------~~d~vi~~ag~~~----------------------~~~~~~~n~~~~~~li~a~~~~---~v------~r~V~~  190 (269)
                            ++|+||||||...                      ++..+++|+.++.++++++.+.   +.      ++||++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                  7999999999421                      1235678999999999998764   33      799999


Q ss_pred             cccCC--CCCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCccccc
Q 024290          191 SIHNC--DKHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAI  232 (269)
Q Consensus       191 SS~~~--~~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~  232 (269)
                      ||...  +..+...|+.+|.+++.+.+.       .|+++++|+||+++++
T Consensus       168 sS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~  218 (276)
T 1mxh_A          168 CDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP  218 (276)
T ss_dssp             CCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             CchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence            99765  334456799999999987643       5899999999999998

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.87  E-value=2.9e-22  Score=171.42  Aligned_cols=154  Identities=12%  Similarity=0.100  Sum_probs=122.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .|++|++|||||+|+||+++++.|+++|++|++++|+.++..+..   ..  ..+.++++|++|++++.++++       
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            477899999999999999999999999999999999865433222   11  257889999999998888764       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH-----HHcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA-----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~-----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      ++|+||||||...           ++..+++|+.++.++++++     ++.+.++||++||...  .......|+.+|.+
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  162 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAG  162 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHH
Confidence            7899999999422           2345678999999888887     3444679999999764  33445679999999


Q ss_pred             HHHHHH--------hcCCCEEEEEcCcccccC
Q 024290          210 TEQFLQ--------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       210 ~e~~~~--------~~gi~~~ilrp~~i~g~~  233 (269)
                      ++.+.+        ..|+++++|+||.+.++.
T Consensus       163 ~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~  194 (257)
T 3imf_A          163 VLAMTKTLAVEWGRKYGIRVNAIAPGPIERTG  194 (257)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCBSSCC
T ss_pred             HHHHHHHHHHHhccccCeEEEEEEECCCcCCc
Confidence            987653        358999999999998874

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.87  E-value=1.7e-22  Score=174.82  Aligned_cols=157  Identities=12%  Similarity=0.038  Sum_probs=124.4

Q ss_pred             CCCCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           77 PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        77 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      ..+.+++|+++||||+|+||+++++.|+++|++|++++|+.+...+...+  ..+.++++|++|.++++++++       
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            34467889999999999999999999999999999999986544333222  357889999999999888774       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~  210 (269)
                      ++|+||||||...           ++..+++|+.++.++++++.    +.+.++||++||....  ..+...|+.+|.++
T Consensus       101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  180 (277)
T 4dqx_A          101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAI  180 (277)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHH
Confidence            7999999999432           23455689999888877774    4456699999997653  34456799999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccC
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+.+.       .|+++++++||.+.+++
T Consensus       181 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  210 (277)
T 4dqx_A          181 SSLTRAMAMDHAKEGIRVNAVAPGTIDSPY  210 (277)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCcCcCch
Confidence            987643       58999999999998875

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.87  E-value=2.4e-22  Score=174.03  Aligned_cols=156  Identities=12%  Similarity=0.106  Sum_probs=123.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC------------cc---ccc--cCCCEEEEcCCCCCCcH
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP------------AD---FLR--DWGATVVNADLSKPETI  142 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~------------~~---~~~--~~~~~~i~~Dl~d~~~l  142 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|++...            .+   .+.  ...+.++++|++|++++
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   86 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL   86 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            57889999999999999999999999999999999974321            01   011  12578899999999998


Q ss_pred             HHHhc-------CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCC
Q 024290          143 PATLV-------GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKH  198 (269)
Q Consensus       143 ~~~~~-------~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~  198 (269)
                      .++++       ++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||...  ...
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  166 (281)
T 3s55_A           87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF  166 (281)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCT
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCC
Confidence            88774       7999999999432           2345678999999888875    4456679999999764  344


Q ss_pred             CCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          199 PEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       199 ~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +...|+.+|.+++.+.+.       .|+++++|+||++++++..
T Consensus       167 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~  210 (281)
T 3s55_A          167 AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTH  210 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTS
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcccc
Confidence            556899999999987642       6899999999999998653

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.87  E-value=4.5e-22  Score=168.32  Aligned_cols=154  Identities=14%  Similarity=0.078  Sum_probs=118.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCccccc--cCCCEEEEcCCCCCCcHHHHhc---------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV---------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~~--~~~~~~i~~Dl~d~~~l~~~~~---------  147 (269)
                      |++|+|+||||+|+||+++++.|+++|  ++|++++|+.+...+..+  ..++.++.+|++|.+++.++++         
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            457899999999999999999999999  999999998655433211  2367899999999998888875         


Q ss_pred             CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHHc----------C-----CCeEEEecccCCCC---
Q 024290          148 GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKAM----------G-----IQKYVFYSIHNCDK---  197 (269)
Q Consensus       148 ~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~----------~-----v~r~V~~SS~~~~~---  197 (269)
                      ++|+||||||...            ++..+++|+.++.++++++...          +     .++||++||.....   
T Consensus        81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  160 (250)
T 1yo6_A           81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence            8999999999543            1234568888988887776432          4     67999999975421   


Q ss_pred             ------CCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          198 ------HPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       198 ------~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                            .+...|+.+|.+++.+++.       .|+++++++||++.+++.
T Consensus       161 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  210 (250)
T 1yo6_A          161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG  210 (250)
T ss_dssp             CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----
T ss_pred             ccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCC
Confidence                  3446799999999987643       489999999999988754

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.87  E-value=6.9e-22  Score=167.15  Aligned_cols=148  Identities=18%  Similarity=0.183  Sum_probs=118.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-------cCccEEEEc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-------VGVHTVIDC  155 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-------~~~d~vi~~  155 (269)
                      +|+++||||+|+||+++++.|+++|++|++++|+.++..+   ..++.++.+|++| +++.+++       .++|+||||
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ---SLGAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---HHTCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---hhCcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEEC
Confidence            5789999999999999999999999999999998654222   2247889999999 8887765       379999999


Q ss_pred             CCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--C--CCCCcHHHHHHHHHHHHHh
Q 024290          156 ATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--K--HPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       156 ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~--~~~~~y~~sK~~~e~~~~~  216 (269)
                      ||...           ++..+++|+.++.++++++    ++.+.++||++||....  .  .+...|+.+|.+++.+.+.
T Consensus        78 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  157 (239)
T 2ekp_A           78 AAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRA  157 (239)
T ss_dssp             CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHH
Confidence            99432           2245568888888877776    45577899999997642  2  4456799999999987643


Q ss_pred             -------cCCCEEEEEcCcccccCc
Q 024290          217 -------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 -------~gi~~~ilrp~~i~g~~~  234 (269)
                             .|+++++++||++++++.
T Consensus       158 la~e~~~~gi~v~~v~Pg~v~t~~~  182 (239)
T 2ekp_A          158 LAKEWARLGIRVNLLCPGYVETEFT  182 (239)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             HHHHhhhcCcEEEEEEeCCccCchh
Confidence                   589999999999998864

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.87  E-value=4.2e-22  Score=170.80  Aligned_cols=135  Identities=20%  Similarity=0.190  Sum_probs=115.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcC--ccEEEEcCCCC--
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG--VHTVIDCATGR--  159 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~--~d~vi~~ag~~--  159 (269)
                      |+|+||||+|+||++++++|+ +|++|++++|+++..      .+   +.+|++|++++.+++++  +|+||||||..  
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   70 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ------GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDV   70 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT------TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC------CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            479999999999999999999 589999999976421      13   88999999999999875  99999999954  


Q ss_pred             -----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC------------CCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK------------HPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       160 -----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~------------~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                           .++..+++|+.++.++++++++.++ +||++||..+..            .+..+|+.+|.++|.+++.  ++++
T Consensus        71 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~--~~~~  147 (273)
T 2ggs_A           71 DKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ--DDSL  147 (273)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC--TTCE
T ss_pred             hhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC--CCeE
Confidence                 3345677899999999999999886 999999976421            2356899999999999987  8999


Q ss_pred             EEEcCcccc
Q 024290          223 IIRLWPYWA  231 (269)
Q Consensus       223 ilrp~~i~g  231 (269)
                      ++||+.+||
T Consensus       148 ~iR~~~v~G  156 (273)
T 2ggs_A          148 IIRTSGIFR  156 (273)
T ss_dssp             EEEECCCBS
T ss_pred             EEecccccc
Confidence            999999997

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.87  E-value=6.9e-23  Score=176.32  Aligned_cols=156  Identities=15%  Similarity=0.062  Sum_probs=121.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      ..+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...+  ..+.++.+|++|+++++++++       ++
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGI  102 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            357889999999999999999999999999999999976554333222  257889999999999888774       79


Q ss_pred             cEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHH
Q 024290          150 HTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       150 d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~  212 (269)
                      |+||||||...           ++..+++|+.++.++.+++    ++.+.++||++||....  ..+...|+.+|.+++.
T Consensus       103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~  182 (266)
T 3grp_A          103 DILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIG  182 (266)
T ss_dssp             CEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHH
Confidence            99999999532           2345678999966665554    55677899999997653  3344679999999988


Q ss_pred             HHHh-------cCCCEEEEEcCcccccCc
Q 024290          213 FLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.       .|+++++++||++.+++.
T Consensus       183 ~~~~la~e~~~~gI~vn~v~PG~v~t~~~  211 (266)
T 3grp_A          183 FSKALAQEIASRNITVNCIAPGFIKSAMT  211 (266)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSHHH
T ss_pred             HHHHHHHHhhhhCcEEEEEeeCcCCCchh
Confidence            7642       689999999999998754

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.87  E-value=3.1e-22  Score=171.21  Aligned_cols=156  Identities=13%  Similarity=0.106  Sum_probs=122.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+.++..+..+      ..++.++.+|++|.+++.++++      
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   90 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            4778999999999999999999999999999999997654332211      2357889999999998887763      


Q ss_pred             -CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHHc----C-CCeEEEecccCCCCC---------CCC
Q 024290          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM----G-IQKYVFYSIHNCDKH---------PEV  201 (269)
Q Consensus       148 -~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~~----~-v~r~V~~SS~~~~~~---------~~~  201 (269)
                       ++|+||||||....           +..+++|+.++.++++++.+.    + .++||++||......         +..
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~  170 (265)
T 1h5q_A           91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV  170 (265)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccccccccc
Confidence             58999999995322           234678999999888887543    3 479999999754221         156


Q ss_pred             cHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          202 PLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       202 ~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .|+.+|.+++.+++.       .|++++++|||++++++..
T Consensus       171 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  211 (265)
T 1h5q_A          171 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA  211 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccc
Confidence            799999999987743       5899999999999998644

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.87  E-value=1.4e-21  Score=166.19  Aligned_cols=149  Identities=15%  Similarity=0.155  Sum_probs=119.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.++..+.      ..+.+|++|+++++++++       ++|+|
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~------~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   85 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL------FGVEVDVTDSDAVDRAFTAVEEHQGPVEVL   85 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS------EEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh------cCeeccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47789999999999999999999999999999999986654332      248899999998887764       68999


Q ss_pred             EEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 024290          153 IDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       153 i~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~  215 (269)
                      |||||...           ++..+++|+.++.++++++.    +.+.++||++||....  ......|+.+|.+++.+.+
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  165 (247)
T 1uzm_A           86 VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMAR  165 (247)
T ss_dssp             EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHHHH
Confidence            99999532           23456789999888887764    4567899999998652  3445679999999988764


Q ss_pred             h-------cCCCEEEEEcCcccccCc
Q 024290          216 D-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .       .|+++++++||++.+++.
T Consensus       166 ~la~e~~~~gi~v~~v~PG~v~t~~~  191 (247)
T 1uzm_A          166 SIARELSKANVTANVVAPGYIDTDMT  191 (247)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             HHHHHhhhcCcEEEEEEeCCCcccch
Confidence            3       689999999999988753

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.87  E-value=2.8e-22  Score=171.62  Aligned_cols=155  Identities=14%  Similarity=0.057  Sum_probs=120.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Cccccc------cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFLR------DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~~~------~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.+. ..+...      ...+.++.+|++|++++.++++      
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            567899999999999999999999999999999997654 322211      2357788999999998888764      


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                       ++|+||||||...           ++..+++|+.++.++++++.    +.+.++||++||...  ...+...|+.+|.+
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  161 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHG  161 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHH
Confidence             7999999999532           23456788888888777763    456789999999764  23455689999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      ++.+.+.       .|+++++++||++.+++..
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  194 (260)
T 1x1t_A          162 VVGFTKVTALETAGQGITANAICPGWVRTPLVE  194 (260)
T ss_dssp             HHHHHHHHHHHHTTTTEEEEEEEECCBCC----
T ss_pred             HHHHHHHHHHHhccCCEEEEEEeecCccCchHH
Confidence            9987643       5899999999999998643

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.87  E-value=4.1e-22  Score=172.39  Aligned_cols=157  Identities=13%  Similarity=0.082  Sum_probs=124.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-----CCCEEEEcCCCCCCcHHHHhc------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-----WGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-----~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      ..+++|+++||||+|+||+++++.|+++|++|++++|+.+...+...+     ..+.++++|++|+++++++++      
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            357889999999999999999999999999999999986654332221     258899999999999888875      


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cC-CCeEEEecccCCCC----CCCCcHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNCDK----HPEVPLMEI  206 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~-v~r~V~~SS~~~~~----~~~~~y~~s  206 (269)
                       ++|+||||||...           ++..+++|+.++.++++++..    .+ .++||++||.....    .+...|+.+
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~as  187 (276)
T 3r1i_A          108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTS  187 (276)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHH
Confidence             7999999999532           223456899998888877643    33 26899999876422    234679999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      |.+++.+.+.       .|+++++|+||++.+++..
T Consensus       188 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  223 (276)
T 3r1i_A          188 KAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVE  223 (276)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTG
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccc
Confidence            9999987643       6899999999999988654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.87  E-value=2.5e-22  Score=171.45  Aligned_cols=156  Identities=14%  Similarity=0.073  Sum_probs=117.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-----CCCEEEEcCCCCCCcHHHHhc------C
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-----WGATVVNADLSKPETIPATLV------G  148 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-----~~~~~i~~Dl~d~~~l~~~~~------~  148 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...+     .++.++.+|++|.+++.++++      +
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP   83 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence            46789999999999999999999999999999999987654433221     247889999999999988875      6


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      +|++|||||...           ++..+++|+.++.++++++    ++.+.++||++||...  +......|+.+|.+++
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  163 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLR  163 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHH
T ss_pred             ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHH
Confidence            899999999532           2345678888888877766    4556679999999764  3344567999999999


Q ss_pred             HHHHh-------cCCCE-EEEEcCcccccCcc
Q 024290          212 QFLQD-------SGLPH-VIIRLWPYWAICST  235 (269)
Q Consensus       212 ~~~~~-------~gi~~-~ilrp~~i~g~~~~  235 (269)
                      .+.+.       .|+++ +++.||.+.+++..
T Consensus       164 ~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~  195 (252)
T 3h7a_A          164 AVAQSMARELMPKNIHVAHLIIDSGVDTAWVR  195 (252)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEEC---------
T ss_pred             HHHHHHHHHhhhcCCEEEEEecCCccCChhhh
Confidence            87643       68999 89999999887643

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.87  E-value=8.9e-23  Score=176.11  Aligned_cols=156  Identities=14%  Similarity=0.078  Sum_probs=124.5

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+.++..+..+     ..++.++.+|++|.+++.++++      
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            35788999999999999999999999999999999997654333221     1257888999999999888774      


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                       ++|+||||||...           ++..+++|+.++.++++++.    +.+.++||++||...  ...+..+|+.+|.+
T Consensus       102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa  181 (271)
T 4ibo_A          102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGG  181 (271)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHH
Confidence             7999999999532           23456789999888866653    446679999999764  33455679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+.       .|++++.++||++.+++.
T Consensus       182 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  213 (271)
T 4ibo_A          182 IKMLTRAMAAEWAQYGIQANAIGPGYMLTDMN  213 (271)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEEeccEeCcch
Confidence            9987643       689999999999998754

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.87  E-value=1.4e-21  Score=165.25  Aligned_cols=153  Identities=12%  Similarity=0.034  Sum_probs=123.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh---cCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL---VGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~---~~~d~vi~~ag  157 (269)
                      +++|+++||||+++||+++++.|+++|++|++++|+.+...+ .....+..+++|++|++++++++   .++|++|||||
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG   87 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-PRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAG   87 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-CCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-hhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            579999999999999999999999999999999998766544 23346888999999999988876   57899999999


Q ss_pred             CCC---------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHHh------
Q 024290          158 GRP---------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQD------  216 (269)
Q Consensus       158 ~~~---------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~~------  216 (269)
                      ...         |+..+++|+.++..+.+++    ++.+ ++||++||...  .......|+.+|.++..+.+.      
T Consensus        88 i~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela  166 (242)
T 4b79_A           88 ISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYA  166 (242)
T ss_dssp             CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            532         4456778998887777665    3334 79999999865  333456799999999987653      


Q ss_pred             -cCCCEEEEEcCcccccCcc
Q 024290          217 -SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       217 -~gi~~~ilrp~~i~g~~~~  235 (269)
                       .||+++.|.||++.+++..
T Consensus       167 ~~gIrVNaV~PG~i~T~m~~  186 (242)
T 4b79_A          167 AERIRVNAIAPGWIDTPLGA  186 (242)
T ss_dssp             GGTEEEEEEEECSBCCC---
T ss_pred             hcCeEEEEEEeCCCCChhhh
Confidence             7999999999999887543

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.87  E-value=3.7e-22  Score=174.42  Aligned_cols=154  Identities=13%  Similarity=0.086  Sum_probs=121.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c--C---CCEEEEcCCCCCCcHHHHhc----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D--W---GATVVNADLSKPETIPATLV----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~--~---~~~~i~~Dl~d~~~l~~~~~----  147 (269)
                      .+.+|+++||||+|+||+++++.|+++|++|++++|+.++..+...   .  .   ++.++.+|++|++++.++++    
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999998654332211   1  1   47889999999998888764    


Q ss_pred             ---CccEEEEcCCCCCC-------------ccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--C-CCCCcHH
Q 024290          148 ---GVHTVIDCATGRPE-------------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--K-HPEVPLM  204 (269)
Q Consensus       148 ---~~d~vi~~ag~~~~-------------~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~-~~~~~y~  204 (269)
                         ++|+||||||....             +..+++|+.++.++++++.    +.+ ++||++||....  . .....|+
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y~  181 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYA  181 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHH
T ss_pred             hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchHH
Confidence               79999999995321             2356688888888877764    345 799999997643  2 3456799


Q ss_pred             HHHHHHHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          205 EIKYCTEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       205 ~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      .+|.+++.+.+       ..|+++++|+||++.+++.
T Consensus       182 asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~  218 (297)
T 1xhl_A          182 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFM  218 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccc
Confidence            99999988764       3699999999999998753

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.87  E-value=8.6e-23  Score=173.86  Aligned_cols=155  Identities=14%  Similarity=0.099  Sum_probs=122.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC-CCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP-RPAPADFLR-----DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +++|+|+||||+|+||++++++|+++|++|++++|+ +++..+...     ..++.++.+|++|++++.++++       
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            677899999999999999999999999999999998 554332221     1247889999999999988875       


Q ss_pred             CccEEEEcCCC-CC-----------CccchhhcHHHHHHHHHHHH----HcC--C---CeEEEecccCC---CCCCCCcH
Q 024290          148 GVHTVIDCATG-RP-----------EEPIKKVDWEGKVALIQCAK----AMG--I---QKYVFYSIHNC---DKHPEVPL  203 (269)
Q Consensus       148 ~~d~vi~~ag~-~~-----------~~~~~~~n~~~~~~li~a~~----~~~--v---~r~V~~SS~~~---~~~~~~~y  203 (269)
                      ++|+||||||. ..           ++..+++|+.++.++++++.    +.+  .   ++||++||...   ...+..+|
T Consensus        85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y  164 (258)
T 3afn_B           85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLY  164 (258)
T ss_dssp             SCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHH
T ss_pred             CCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHH
Confidence            89999999995 22           12345788889888877663    222  2   68999998753   33456689


Q ss_pred             HHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          204 MEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       204 ~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+|.++|.+++.       .|++++++|||++++++..
T Consensus       165 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~  203 (258)
T 3afn_B          165 GAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHA  203 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccc
Confidence            9999999987643       4899999999999998644

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=4.5e-22  Score=171.98  Aligned_cols=154  Identities=17%  Similarity=0.121  Sum_probs=120.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc----CCCEEEEcCCCCCCcHHHHhc-----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD----WGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~----~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      .+.+|++|||||+|+||+++++.|+++|++|++++|+.++..+..   ..    ..+.++.+|++|++++.++++     
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            367899999999999999999999999999999999754432221   11    236788999999999887774     


Q ss_pred             --CccEEEEcCCCCC-----------CccchhhcHHH----HHHHHHHHHHcCC--CeEEEecccCCC----CCCCCcHH
Q 024290          148 --GVHTVIDCATGRP-----------EEPIKKVDWEG----KVALIQCAKAMGI--QKYVFYSIHNCD----KHPEVPLM  204 (269)
Q Consensus       148 --~~d~vi~~ag~~~-----------~~~~~~~n~~~----~~~li~a~~~~~v--~r~V~~SS~~~~----~~~~~~y~  204 (269)
                        ++|+||||||...           ++..+++|+.+    +..+++.+++.+.  ++||++||....    ..+...|+
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~  188 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYS  188 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHH
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhH
Confidence              7999999999432           12356688888    6667777777775  799999998653    22335699


Q ss_pred             HHHHHHHHHHH---------hcCCCEEEEEcCcccccC
Q 024290          205 EIKYCTEQFLQ---------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       205 ~sK~~~e~~~~---------~~gi~~~ilrp~~i~g~~  233 (269)
                      .+|.+++.+++         ..++++++|+||++.+++
T Consensus       189 ~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  226 (279)
T 1xg5_A          189 ATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF  226 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchh
Confidence            99999887653         358999999999998875

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.87  E-value=4.1e-22  Score=172.79  Aligned_cols=156  Identities=15%  Similarity=0.104  Sum_probs=121.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Ccc---ccc---cCCCEEEEcCCCCCCcHHHHhc-----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PAD---FLR---DWGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~---~~~---~~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      ++++|++|||||+|+||+++++.|+++|++|++++|+... ..+   .+.   ...+.++.+|++|.+++.++++     
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  101 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR  101 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            5778999999999999999999999999999999995322 111   111   2357888999999999888774     


Q ss_pred             --CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHH
Q 024290          148 --GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (269)
Q Consensus       148 --~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~  208 (269)
                        ++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||...  .......|+.+|.
T Consensus       102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  181 (281)
T 3v2h_A          102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKH  181 (281)
T ss_dssp             TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHH
Confidence              7899999999532           2345678999998888876    5556779999999764  3344567999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +++.+.+.       .|+++++++||++++++..
T Consensus       182 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~  215 (281)
T 3v2h_A          182 GIMGLTKTVALEVAESGVTVNSICPGYVLTPLVE  215 (281)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCC----
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchh
Confidence            99987643       5899999999999988643

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.87  E-value=3.4e-22  Score=172.25  Aligned_cols=157  Identities=13%  Similarity=0.087  Sum_probs=123.8

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-cc---ccc--cCCCEEEEcCCCCCCcHHHHhc-----
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-AD---FLR--DWGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~---~~~--~~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      .++++|+++||||+|+||+++++.|+++|++|++++|+.... .+   .+.  ...+.++.+|++|.++++++++     
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            457889999999999999999999999999999999853321 11   111  1257889999999999888774     


Q ss_pred             --CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHH
Q 024290          148 --GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (269)
Q Consensus       148 --~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~  208 (269)
                        ++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||...  .......|+.+|.
T Consensus       104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  183 (269)
T 4dmm_A          104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKA  183 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHH
Confidence              7899999999532           2345678999988888876    4456789999999754  3445678999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +++.+.+.       .|+++++|+||++.+++..
T Consensus       184 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~  217 (269)
T 4dmm_A          184 GVIGLTKTVAKELASRGITVNAVAPGFIATDMTS  217 (269)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc
Confidence            99887642       6899999999999988643

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.87  E-value=2.7e-22  Score=171.15  Aligned_cols=155  Identities=14%  Similarity=0.062  Sum_probs=123.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHh-------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      ++++|+++||||+++||+++++.|+++|++|++++|+.++..+..   +.  ..+..+++|++|++++++++       .
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999865543322   22  24778999999999988876       4


Q ss_pred             CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 ~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      ++|++|||||...            |+..+++|+.++..+.+++    ++.+-++||++||...  ......+|+.+|.+
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaa  163 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHG  163 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHH
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHH
Confidence            7999999999421            3345678888877666554    5567789999999865  33445679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +..+.+.       .||+++.|.||++.+++.
T Consensus       164 l~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~  195 (254)
T 4fn4_A          164 LIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIG  195 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSCT
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCCCCccc
Confidence            9987653       799999999999988753

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.87  E-value=3.9e-22  Score=169.40  Aligned_cols=155  Identities=13%  Similarity=0.096  Sum_probs=120.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC-CCCCCccc---cc--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R-~~~~~~~~---~~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +++|+++||||+|+||+++++.|+++|++|++++| +.++..+.   +.  ...+.++.+|++|++++.++++       
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            56789999999999999999999999999999999 44332221   11  1247789999999999888774       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||...  .......|+.+|.++
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  161 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGV  161 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHH
Confidence            7999999999532           2245678888866665554    4567789999999753  334456799999999


Q ss_pred             HHHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          211 EQFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       211 e~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+.+       ..|+++++|+||++.+++..
T Consensus       162 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  193 (246)
T 2uvd_A          162 IGLTKTSAKELASRNITVNAIAPGFIATDMTD  193 (246)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBGGGCSS
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeccccCcchh
Confidence            87754       36899999999999987643

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.87  E-value=1.4e-22  Score=172.64  Aligned_cols=156  Identities=17%  Similarity=0.064  Sum_probs=108.5

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.+...+...     ...+.++.+|++|++++.++++      
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34778999999999999999999999999999999997654333221     1247789999999999888774      


Q ss_pred             -CccEEEEcCCCCC--------------CccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCCCCCCCCcHHHHHH
Q 024290          148 -GVHTVIDCATGRP--------------EEPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNCDKHPEVPLMEIKY  208 (269)
Q Consensus       148 -~~d~vi~~ag~~~--------------~~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~  208 (269)
                       ++|+||||||...              ++..+++|+.++.++.++    +++.+.++||++||.... .+...|+.+|.
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~Y~asK~  163 (253)
T 3qiv_A           85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW-LYSNYYGLAKV  163 (253)
T ss_dssp             SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC------------CCHH
T ss_pred             CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc-CCCchhHHHHH
Confidence             7999999998521              134567899996655554    455667899999998764 45667999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +++.+++.       .|+++++++||+++++...
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  197 (253)
T 3qiv_A          164 GINGLTQQLSRELGGRNIRINAIAPGPIDTEANR  197 (253)
T ss_dssp             HHHHHHHHHHHHTTTTTEEEEEEEC---------
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEecCCcccchh
Confidence            99987643       5899999999999987543

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.87  E-value=2.3e-21  Score=166.53  Aligned_cols=148  Identities=18%  Similarity=0.146  Sum_probs=120.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+.+.      ..++.++.+|++|++++.++++       ++|+|
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l   78 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVL   78 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999999999999999999999999999999997654      2357889999999998888774       79999


Q ss_pred             EEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 024290          153 IDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       153 i~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~  215 (269)
                      |||||...           ++..+++|+.++.++++++.+    .+.++||++||....  ..+...|+.+|.+++.+.+
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  158 (264)
T 2dtx_A           79 VNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTK  158 (264)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHHHH
Confidence            99999532           234567899998888777753    456799999997643  3445679999999998764


Q ss_pred             h----cC--CCEEEEEcCcccccC
Q 024290          216 D----SG--LPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 ~----~g--i~~~ilrp~~i~g~~  233 (269)
                      .    .+  +++++|+||++.+++
T Consensus       159 ~la~e~~~~i~vn~v~PG~v~t~~  182 (264)
T 2dtx_A          159 SIALDYAPLLRCNAVCPATIDTPL  182 (264)
T ss_dssp             HHHHHHTTTSEEEEEEECSBCSHH
T ss_pred             HHHHHhcCCcEEEEEEeCCCcCcc
Confidence            3    12  999999999998875

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.87  E-value=4.7e-22  Score=167.69  Aligned_cols=146  Identities=16%  Similarity=0.094  Sum_probs=119.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc------CccEEEEcC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV------GVHTVIDCA  156 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~------~~d~vi~~a  156 (269)
                      +|+++||||+|+||++++++|+++|++|++++|+.+ .      ..+.++++|++|++++.++++      ++|+|||||
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~a   74 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAA   74 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcc
Confidence            578999999999999999999999999999999765 2      145889999999999988886      789999999


Q ss_pred             CCCC---------------CccchhhcHHHHHHHHHHHHHc----C------CCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          157 TGRP---------------EEPIKKVDWEGKVALIQCAKAM----G------IQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       157 g~~~---------------~~~~~~~n~~~~~~li~a~~~~----~------v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      |...               ++..+++|+.++.++++++.+.    +      .++||++||...  ...+...|+.+|.+
T Consensus        75 g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  154 (242)
T 1uay_A           75 GVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGG  154 (242)
T ss_dssp             CCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             cccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHHHH
Confidence            8421               2345578999999999888653    1      129999999754  34456789999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      ++.+++.       .|++++++|||++++++..
T Consensus       155 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  187 (242)
T 1uay_A          155 VVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ  187 (242)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeccCcchhhh
Confidence            9887643       4899999999999998643

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.87  E-value=9.1e-22  Score=168.00  Aligned_cols=154  Identities=16%  Similarity=0.070  Sum_probs=120.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-cccccc--CCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.+.. .+.+..  .++.++.+|++|++++.++++       ++|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5678999999999999999999999999999999976511 111211  246788999999999988875       899


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHH----HHHHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~----a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~  213 (269)
                      +||||||...           ++..+++|+.++.++.+    .+++.+.++||++||....  ......|+.+|.+++.+
T Consensus        82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  161 (255)
T 2q2v_A           82 ILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGL  161 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHH
Confidence            9999999532           12355688887665554    4566777899999997643  33456799999999987


Q ss_pred             HHh-------cCCCEEEEEcCcccccCc
Q 024290          214 LQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.       .|+++++|+||++++++.
T Consensus       162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~  189 (255)
T 2q2v_A          162 TKVVGLETATSNVTCNAICPGWVLTPLV  189 (255)
T ss_dssp             HHHHHHHTTTSSEEEEEEEESSBCCHHH
T ss_pred             HHHHHHHhcccCcEEEEEeeCCCcCcch
Confidence            753       589999999999999863

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.87  E-value=4.3e-22  Score=170.13  Aligned_cols=155  Identities=12%  Similarity=0.038  Sum_probs=120.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC-CCCCCccc---cc--cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADF---LR--DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R-~~~~~~~~---~~--~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+.+|+|+||||+|+||++++++|+++|++|++++| +.+...+.   +.  ...+.++.+|++|.+++.++++      
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            367889999999999999999999999999999999 54322221   11  1246788999999998888775      


Q ss_pred             -CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHH----HcC-CCeEEEecccCC--CCCCCCcHHHHHH
Q 024290          148 -GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNC--DKHPEVPLMEIKY  208 (269)
Q Consensus       148 -~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~----~~~-v~r~V~~SS~~~--~~~~~~~y~~sK~  208 (269)
                       ++|+||||||....           +..+++|+.++.++++++.    +.+ .++||++||...  +..+...|+.+|.
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  163 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKG  163 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHH
Confidence             79999999995321           2356688888887777654    445 679999999764  3345568999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+.       .|++++++|||++++++.
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  196 (261)
T 1gee_A          164 GMKLMTETLALEYAPKGIRVNNIGPGAINTPIN  196 (261)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGG
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCCcCCchh
Confidence            99877643       589999999999999864

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.87  E-value=5.5e-22  Score=173.07  Aligned_cols=154  Identities=14%  Similarity=0.115  Sum_probs=121.8

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCCCCCCcHHHHhc-----
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      ..+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...      ..++.++.+|++|.+++.++++     
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999998654332211      2357889999999998887764     


Q ss_pred             --CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH-----cCCCeEEEecccCC--CCCCCCcHHHHH
Q 024290          148 --GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA-----MGIQKYVFYSIHNC--DKHPEVPLMEIK  207 (269)
Q Consensus       148 --~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~-----~~v~r~V~~SS~~~--~~~~~~~y~~sK  207 (269)
                        ++|+||||||...           ++..+++|+.++.++++++.+     .+.++||++||...  +..+..+|+.+|
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  181 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAK  181 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHH
Confidence              5699999999432           234567899999888877743     34579999999754  345567899999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCccccc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAI  232 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~  232 (269)
                      .+++.+++.       .|++++++|||+++++
T Consensus       182 ~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~  213 (302)
T 1w6u_A          182 AGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTK  213 (302)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeccCCCc
Confidence            999987643       6899999999999986

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.87  E-value=3e-22  Score=173.31  Aligned_cols=154  Identities=12%  Similarity=0.069  Sum_probs=121.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--C---CCEEEEcCCCCCCcHHHHhc----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--W---GATVVNADLSKPETIPATLV----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~---~~~~i~~Dl~d~~~l~~~~~----  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+..   ..  .   ++.++.+|++|+++++++++    
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999865433221   11  1   47889999999998887764    


Q ss_pred             ---CccEEEEcCCCCCC---------------ccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCCCC---CCCCc
Q 024290          148 ---GVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDK---HPEVP  202 (269)
Q Consensus       148 ---~~d~vi~~ag~~~~---------------~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~~~---~~~~~  202 (269)
                         ++|+||||||....               +..+++|+.++.++++++..    .+ ++||++||.....   .+...
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~  161 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLY  161 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHH
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccH
Confidence               78999999995321               23456888898888887753    35 7999999976532   34567


Q ss_pred             HHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          203 LMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       203 y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      |+.+|.+++.+.+.       .|+++++|+||++++++.
T Consensus       162 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  200 (280)
T 1xkq_A          162 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFT  200 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcc
Confidence            99999999987643       689999999999998853

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.87  E-value=4.5e-22  Score=169.07  Aligned_cols=157  Identities=11%  Similarity=-0.000  Sum_probs=121.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc---CccEEE
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV---GVHTVI  153 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~---~~d~vi  153 (269)
                      ....+|+|+||||+|+||+++++.|+++|++|++++|+.++..+..+.  ..+.++.+|++|.+++.++++   ++|+||
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li   89 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILV   89 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEE
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            357889999999999999999999999999999999976544332221  357888999999999988875   689999


Q ss_pred             EcCCCC-----------CCccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh
Q 024290          154 DCATGR-----------PEEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       154 ~~ag~~-----------~~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~  216 (269)
                      ||||..           .++..+++|+.++.++++++    ++.+.++||++||....  ......|+.+|.+++.+.+.
T Consensus        90 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  169 (249)
T 3f9i_A           90 CNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKS  169 (249)
T ss_dssp             ECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHHHH
Confidence            999942           23456778999988887776    34566799999997653  34456799999999887642


Q ss_pred             -------cCCCEEEEEcCcccccCcc
Q 024290          217 -------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       217 -------~gi~~~ilrp~~i~g~~~~  235 (269)
                             .|+++++++||.+.+++..
T Consensus       170 la~e~~~~gi~v~~v~PG~v~t~~~~  195 (249)
T 3f9i_A          170 LSYEVATRGITVNAVAPGFIKSDMTD  195 (249)
T ss_dssp             HHHHHGGGTEEEEEEEECCBC-----
T ss_pred             HHHHHHHcCcEEEEEecCccccCccc
Confidence                   6899999999999987643

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.87  E-value=3.9e-22  Score=172.63  Aligned_cols=155  Identities=19%  Similarity=0.113  Sum_probs=124.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.+...+...+  ..+.++.+|++|++++.++++       ++|
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  105 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVD  105 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            47889999999999999999999999999999999986544332222  357899999999998887764       789


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~  213 (269)
                      +||||||...           ++..+++|+.++.++++++.    +.+.++||++||....  ..+...|+.+|.+++.+
T Consensus       106 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l  185 (277)
T 3gvc_A          106 KLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQL  185 (277)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHH
Confidence            9999999532           23456789999888877764    4566799999997653  33456799999999987


Q ss_pred             HH-------hcCCCEEEEEcCcccccCc
Q 024290          214 LQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      .+       ..|+++++|+||++++++.
T Consensus       186 ~~~la~e~~~~gI~vn~v~PG~v~t~~~  213 (277)
T 3gvc_A          186 SRITAAELRSSGIRSNTLLPAFVDTPMQ  213 (277)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             HHHHHHHhcccCeEEEEEeeCCccCchH
Confidence            65       2689999999999998753

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.87  E-value=3.8e-22  Score=176.44  Aligned_cols=155  Identities=14%  Similarity=0.129  Sum_probs=118.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-c----cc---cc--cCCCEEEEcCCCCCCcHHHHhc--
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-A----DF---LR--DWGATVVNADLSKPETIPATLV--  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~----~~---~~--~~~~~~i~~Dl~d~~~l~~~~~--  147 (269)
                      .|++|+++||||+|+||+++++.|+++|++|++.+|+.... .    +.   +.  ...+.++.+|++|++++.++++  
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            35678999999999999999999999999999999974221 1    11   11  1357899999999999888875  


Q ss_pred             -----CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC---CCCCCcHH
Q 024290          148 -----GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD---KHPEVPLM  204 (269)
Q Consensus       148 -----~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~---~~~~~~y~  204 (269)
                           ++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||....   .....+|+
T Consensus        82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~  161 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYF  161 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHH
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHH
Confidence                 8999999999432           2345679999999988887    66677899999998653   22345799


Q ss_pred             HHHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          205 EIKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       205 ~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+|.++|.+.+.       .|+++++|+||.+.++..
T Consensus       162 asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          162 AAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence            999999987643       699999999999986643

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.87  E-value=2.2e-22  Score=171.54  Aligned_cols=155  Identities=10%  Similarity=0.059  Sum_probs=121.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------c-CCCEEEEcCCCCCCcHHHHhc----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------D-WGATVVNADLSKPETIPATLV----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~-~~~~~i~~Dl~d~~~l~~~~~----  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+..+       . ..+.++.+|++|.+++.++++    
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999998654332221       1 467899999999998887763    


Q ss_pred             ---CccEEEEcCCCCC----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHH
Q 024290          148 ---GVHTVIDCATGRP----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (269)
Q Consensus       148 ---~~d~vi~~ag~~~----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~  208 (269)
                         ++|+||||||...          ++..+++|+.++..+++++    ++.+.++||++||....  ..+...|+.+|.
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  163 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKF  163 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHH
T ss_pred             hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHH
Confidence               6899999999532          2345678999988888776    44566799999998653  345678999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+.       .|++++.++||++.+++.
T Consensus       164 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~  196 (250)
T 3nyw_A          164 ALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA  196 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcccCchh
Confidence            99887643       589999999999988753

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.87  E-value=6.1e-22  Score=171.18  Aligned_cols=154  Identities=16%  Similarity=0.042  Sum_probs=124.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc------C
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV------G  148 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~------~  148 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.+...+...     ...+.++.+|++|.+++.++++      +
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4778999999999999999999999999999999998776544322     2357889999999999888774      7


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCCCCC--CCcHHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDKHP--EVPLMEIKYCTE  211 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~~~~--~~~y~~sK~~~e  211 (269)
                      +|++|||||...           ++..+++|+.++.++++++    ++.+.++||++||.......  ...|+.+|.+++
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  189 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQH  189 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHH
Confidence            899999999532           2345678999988888876    44566799999998654333  345999999999


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccC
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .+.+.       .|+++++|+||++.+++
T Consensus       190 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~  218 (275)
T 4imr_A          190 NLIQSQARDFAGDNVLLNTLAPGLVDTDR  218 (275)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESSBCSHH
T ss_pred             HHHHHHHHHhcccCcEEEEEEeccccCcc
Confidence            87643       58999999999998875

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.87  E-value=5.2e-22  Score=168.57  Aligned_cols=156  Identities=13%  Similarity=0.020  Sum_probs=121.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.+...+...    ..++.++.+|++|++++.++++       +
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999999997543322111    1367899999999998888774       5


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHH----HHHcCC-CeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQC----AKAMGI-QKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a----~~~~~v-~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      +|+||||||...           ++..+++|+.++.++.++    +++.+. ++||++||...  ...+...|+.+|.++
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  162 (251)
T 1zk4_A           83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV  162 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHH
Confidence            899999999432           123566888877665555    445566 79999999764  334456899999999


Q ss_pred             HHHHH---------hcCCCEEEEEcCcccccCcc
Q 024290          211 EQFLQ---------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       211 e~~~~---------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+++         ..+++++++|||++++++..
T Consensus       163 ~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~  196 (251)
T 1zk4_A          163 RIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVD  196 (251)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHH
T ss_pred             HHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhh
Confidence            87764         46899999999999998643

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.87  E-value=1.3e-21  Score=168.60  Aligned_cols=150  Identities=10%  Similarity=0.088  Sum_probs=121.2

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccE
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHT  151 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~  151 (269)
                      ....+|+||||||+|+||+++++.|+++|++|++++|+.+....     .+..+++|++|.+++.++++       ++|+
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN-----VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTT-----SSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC-----ceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35788999999999999999999999999999999998654422     56789999999999888774       7999


Q ss_pred             EEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 024290          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       152 vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~  214 (269)
                      ||||||...           ++..+++|+.++.++++++.    +.+.++||++||....  ......|+.+|.+++.+.
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~  164 (269)
T 3vtz_A           85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLT  164 (269)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHHH
Confidence            999999532           22345689999888877754    4567799999997653  344567999999999877


Q ss_pred             Hh------cCCCEEEEEcCcccccC
Q 024290          215 QD------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       215 ~~------~gi~~~ilrp~~i~g~~  233 (269)
                      +.      .++++++|+||++++++
T Consensus       165 ~~la~e~~~~i~vn~v~PG~v~T~~  189 (269)
T 3vtz_A          165 RSVAIDYAPKIRCNAVCPGTIMTPM  189 (269)
T ss_dssp             HHHHHHHTTTEEEEEEEECSBCCHH
T ss_pred             HHHHHHhcCCCEEEEEEECCCcCcc
Confidence            53      38999999999999875

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.87  E-value=2.3e-23  Score=171.88  Aligned_cols=148  Identities=21%  Similarity=0.200  Sum_probs=120.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc---CccEEEEcCCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---GVHTVIDCATGRP  160 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~---~~d~vi~~ag~~~  160 (269)
                      |+++||||+|+||++++++|+++  +|++++|++++..+.....+.+++.+|++|++++.++++   ++|+||||||...
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~   78 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGKAG   78 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcCC
Confidence            57999999999999999999998  999999976543332221122788999999999999887   8999999999432


Q ss_pred             -----------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHHh-------cCCC
Q 024290          161 -----------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQD-------SGLP  220 (269)
Q Consensus       161 -----------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~~-------~gi~  220 (269)
                                 ++..+++|+.++.++++++++.+.++||++||...  +..+..+|+.+|.++|.+++.       .|++
T Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~  158 (207)
T 2yut_A           79 RASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVH  158 (207)
T ss_dssp             CBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhCCE
Confidence                       12356789999999999997777789999999754  344567899999999987753       6999


Q ss_pred             EEEEEcCcccccC
Q 024290          221 HVIIRLWPYWAIC  233 (269)
Q Consensus       221 ~~ilrp~~i~g~~  233 (269)
                      ++++|||++++++
T Consensus       159 v~~v~pg~v~t~~  171 (207)
T 2yut_A          159 LVLVRLPAVATGL  171 (207)
T ss_dssp             EEEECCCCBCSGG
T ss_pred             EEEEecCcccCCC
Confidence            9999999999885

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.87  E-value=2e-21  Score=166.53  Aligned_cols=157  Identities=12%  Similarity=0.034  Sum_probs=122.2

Q ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHhc---
Q 024290           78 GTPVRPTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV---  147 (269)
Q Consensus        78 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~G---~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~---  147 (269)
                      ...+++|+|+||||+|+||++++++|+++|   ++|++++|+.+......+    ..++.++.+|++|.+++.++++   
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence            345788999999999999999999999999   999999998765432111    1368899999999999988875   


Q ss_pred             ------CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHHc----------C-----CCeEEEecccC
Q 024290          148 ------GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKAM----------G-----IQKYVFYSIHN  194 (269)
Q Consensus       148 ------~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~----------~-----v~r~V~~SS~~  194 (269)
                            ++|+||||||...            ++..+++|+.++.++++++.+.          +     .++||++||..
T Consensus        96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  175 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  175 (267)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence                  7999999999543            1234568889988888877543          2     47999999976


Q ss_pred             CCC-----CCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          195 CDK-----HPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       195 ~~~-----~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ...     .+...|+.+|.+++.+++.       .++++++++||++.+++.
T Consensus       176 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  227 (267)
T 1sny_A          176 GSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG  227 (267)
T ss_dssp             GCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT
T ss_pred             ccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCC
Confidence            422     2456799999999987643       589999999999987754

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.86  E-value=3.9e-22  Score=170.04  Aligned_cols=155  Identities=15%  Similarity=0.062  Sum_probs=121.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCCCC--Cccccc---cCCCEEEEcCCCCC-CcHHHHhc-----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPA--PADFLR---DWGATVVNADLSKP-ETIPATLV-----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~-V~~~~R~~~~--~~~~~~---~~~~~~i~~Dl~d~-~~l~~~~~-----  147 (269)
                      ++++|+++||||+|+||++++++|+++|++ |++++|+.+.  ..+...   ..++.++.+|++|+ +++.++++     
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            367899999999999999999999999997 9999997532  111111   12477899999998 88777664     


Q ss_pred             --CccEEEEcCCCCC---CccchhhcHHHHHHHHHHHHHc----C---CCeEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 024290          148 --GVHTVIDCATGRP---EEPIKKVDWEGKVALIQCAKAM----G---IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       148 --~~d~vi~~ag~~~---~~~~~~~n~~~~~~li~a~~~~----~---v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~  213 (269)
                        ++|+||||||...   ++..+++|+.++.++++++.+.    +   .++||++||....  ......|+.+|.+++.+
T Consensus        82 ~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  161 (254)
T 1sby_A           82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSF  161 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHH
Confidence              7999999999533   4566789999999999888643    1   3589999997653  33456799999999987


Q ss_pred             HHh-------cCCCEEEEEcCcccccCc
Q 024290          214 LQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.       .|+++++++||++.+++.
T Consensus       162 ~~~la~~~~~~gi~v~~v~Pg~v~t~~~  189 (254)
T 1sby_A          162 TNSLAKLAPITGVTAYSINPGITRTPLV  189 (254)
T ss_dssp             HHHHHHHHHHHSEEEEEEEECSEESHHH
T ss_pred             HHHHHHHhccCCeEEEEEecCCccCccc
Confidence            643       689999999999998753

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.86  E-value=4.8e-22  Score=172.05  Aligned_cols=157  Identities=14%  Similarity=0.078  Sum_probs=121.7

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-------------Ccc---cccc--CCCEEEEcCCCCCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-------------PAD---FLRD--WGATVVNADLSKPE  140 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-------------~~~---~~~~--~~~~~i~~Dl~d~~  140 (269)
                      ..+++|+++||||+|+||+++++.|+++|++|++++|+.+.             ..+   .+..  ..+.++.+|++|++
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   90 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA   90 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            35788999999999999999999999999999999985221             111   1111  24778899999999


Q ss_pred             cHHHHhc-------CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcC-CCeEEEecccCCC-
Q 024290          141 TIPATLV-------GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNCD-  196 (269)
Q Consensus       141 ~l~~~~~-------~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~-v~r~V~~SS~~~~-  196 (269)
                      +++++++       ++|+||||||...           ++..+++|+.++.++++++.    +.+ .++||++||.... 
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  170 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK  170 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc
Confidence            9888764       7999999999532           22356689999888888763    333 5689999997653 


Q ss_pred             -CCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          197 -KHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       197 -~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                       ......|+.+|.+++.+.+.       .|+++++|+||++++++..
T Consensus       171 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~  217 (280)
T 3pgx_A          171 ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE  217 (280)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccc
Confidence             33456799999999987642       6899999999999998643

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.86  E-value=4.1e-22  Score=170.75  Aligned_cols=155  Identities=14%  Similarity=0.159  Sum_probs=121.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc----cc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----RD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~----~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+...+.+    ..  .++.++++|++|.+++.++++       
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            45789999999999999999999999999999988754322211    11  257899999999999888874       


Q ss_pred             CccEEEEcCCC--CC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC----CCCCCCcHHHH
Q 024290          148 GVHTVIDCATG--RP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC----DKHPEVPLMEI  206 (269)
Q Consensus       148 ~~d~vi~~ag~--~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~----~~~~~~~y~~s  206 (269)
                      ++|+||||||.  ..           ++..+++|+.++.++++++    ++.+.++||++||.+.    +..+...|+.+
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~as  164 (264)
T 3i4f_A           85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAA  164 (264)
T ss_dssp             CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHH
T ss_pred             CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHH
Confidence            79999999992  21           1345678999998888887    5667789999998733    22334679999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      |.+++.+.+.       .|+++++++||++++++..
T Consensus       165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  200 (264)
T 3i4f_A          165 KVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKE  200 (264)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGS
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccch
Confidence            9999987642       6899999999999998654

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.86  E-value=4.4e-22  Score=168.45  Aligned_cols=153  Identities=11%  Similarity=0.051  Sum_probs=121.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCCCCCCcccc---c--cCCCEEEEcCCCCCCcHHHHhc---
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRPAPADFL---R--DWGATVVNADLSKPETIPATLV---  147 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-------~V~~~~R~~~~~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~~---  147 (269)
                      +|+|+||||+|+||+++++.|+++|+       +|++++|+.++..+..   .  ...+.++.+|++|++++.++++   
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999       9999999754432221   1  1247789999999998888774   


Q ss_pred             ----CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHH
Q 024290          148 ----GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEI  206 (269)
Q Consensus       148 ----~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~s  206 (269)
                          ++|+||||||...           ++..+++|+.++.++++++.    +.+.++||++||....  ..+..+|+.+
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  161 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS  161 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHHH
Confidence                7999999999532           22345689999988888764    4567899999997653  3445679999


Q ss_pred             HHHHHHHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          207 KYCTEQFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       207 K~~~e~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      |.+++.+++       ..|++++++|||++++++..
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  197 (244)
T 2bd0_A          162 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG  197 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhh
Confidence            999998763       36899999999999998643

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.86  E-value=3.9e-22  Score=174.59  Aligned_cols=155  Identities=13%  Similarity=0.056  Sum_probs=123.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+.+|+||||||+|+||++++++|+++|++|++++|+.+...+...     ...+.++.+|++|.+++.++++       
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            3778999999999999999999999999999999998654433221     1257889999999999888774       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcC-CCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~-v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      ++|+||||||...           ++..+++|+.++.++++++.    +.+ .++||++||...  +......|+.+|.+
T Consensus       108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  187 (301)
T 3tjr_A          108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYG  187 (301)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHH
Confidence            7999999999532           23456789999998888763    344 569999999765  33345679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+.       .|+++++|+||++.+++.
T Consensus       188 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  219 (301)
T 3tjr_A          188 VVGLAETLAREVKPNGIGVSVLCPMVVETKLV  219 (301)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEECCSCCCSSHH
T ss_pred             HHHHHHHHHHHhcccCcEEEEEECCccccccc
Confidence            9887642       589999999999988754

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.86  E-value=3.9e-22  Score=172.46  Aligned_cols=153  Identities=14%  Similarity=0.139  Sum_probs=122.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...      ...+.++++|++|.+++.++++      
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4788999999999999999999999999999999998654322211      2357889999999998887764      


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                       ++|+||||||...           ++..+++|+.++.++++++.    +.+.++||++||...  .......|+.+|.+
T Consensus       104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  183 (277)
T 4fc7_A          104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAA  183 (277)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHH
Confidence             7999999999432           23456789999999888873    344579999999754  34455689999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCccccc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAI  232 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~  232 (269)
                      ++.+.+.       .|+++++|+||++.++
T Consensus       184 ~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  213 (277)
T 4fc7_A          184 VDAMTRHLAVEWGPQNIRVNSLAPGPISGT  213 (277)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBSSS
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEECCEecc
Confidence            9987643       5899999999999876

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.86  E-value=2.8e-22  Score=172.89  Aligned_cols=155  Identities=10%  Similarity=0.026  Sum_probs=123.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+.+...+...     ...+.++.+|++|.++++++++       
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG  104 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            4778999999999999999999999999999999997654332211     1257889999999998888774       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++|+||||||...           ++..+++|+.++.++++++.    +.+.++||++||...  .......|+.+|.++
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  184 (270)
T 3ftp_A          105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGV  184 (270)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHH
Confidence            7999999999432           23456789999998888774    345679999999754  344556899999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.+.       .|+++++|+||++.+++.
T Consensus       185 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  215 (270)
T 3ftp_A          185 AGMTRALAREIGSRGITVNCVAPGFIDTDMT  215 (270)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSHHH
T ss_pred             HHHHHHHHHHHhhhCeEEEEEEeCCCcCcch
Confidence            887643       689999999999988753

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.86  E-value=2.7e-22  Score=172.05  Aligned_cols=154  Identities=14%  Similarity=0.073  Sum_probs=120.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---ccc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.+...+.   +..  ..+.++.+|++|++++.++++       
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999975443222   111  247789999999988877764       


Q ss_pred             CccEEEEcCCCC-C-----------CccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 GVHTVIDCATGR-P-----------EEPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 ~~d~vi~~ag~~-~-----------~~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      ++|+||||||.. .           ++..+++|+.++.++++++.+    .+.++||++||...  .......|+.+|.+
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  163 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGA  163 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHH
Confidence            789999999854 2           133566889998888777643    46679999999753  23344579999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      ++.+.+.       .|+++++|+||++.+++
T Consensus       164 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  194 (262)
T 1zem_A          164 IIALTETAALDLAPYNIRVNAISPGYMGPGF  194 (262)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSH
T ss_pred             HHHHHHHHHHHHHhhCeEEEEEecCCcCcch
Confidence            9877643       68999999999998875

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.86  E-value=2.9e-22  Score=170.50  Aligned_cols=155  Identities=16%  Similarity=0.162  Sum_probs=124.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc--cCCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--~~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.+...+...  ...+.++.+|++|+++++++++       ++|
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID   82 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence            4788999999999999999999999999999999998654433322  2357888999999999888774       799


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHH----HHHcC-CCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQC----AKAMG-IQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a----~~~~~-v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      +||||||...           ++..+++|+.++.+++++    +++.+ .++||++||...  .......|+.+|.+++.
T Consensus        83 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  162 (247)
T 3rwb_A           83 ILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIG  162 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHH
Confidence            9999999532           234567899998888887    55555 579999999754  34456789999999988


Q ss_pred             HHHh-------cCCCEEEEEcCcccccCc
Q 024290          213 FLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.       .|+++++++||.+.+++.
T Consensus       163 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~  191 (247)
T 3rwb_A          163 FTRALATELGKYNITANAVTPGLIESDGV  191 (247)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCcCcCccc
Confidence            7642       689999999999988743

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.86  E-value=1.4e-21  Score=170.31  Aligned_cols=155  Identities=11%  Similarity=0.129  Sum_probs=124.6

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc----ccc--CCCEEEEcCCCCCCcHHHHhc-----
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LRD--WGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~~~--~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+.+...+.    ++.  ..+.++.+|++|+++++++++     
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            357889999999999999999999999999999999976432211    111  257889999999998887764     


Q ss_pred             --CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 --GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 --~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                        ++|+||||||...            ++..+++|+.++.++++++...  ..++||++||...  .......|+.+|.+
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  202 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGA  202 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHH
Confidence              7899999998431            2345678999999999999765  2359999999754  34455789999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      ++.+.+.       .|+++++|+||++++++
T Consensus       203 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  233 (291)
T 3ijr_A          203 IVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL  233 (291)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCSTH
T ss_pred             HHHHHHHHHHHHhhcCEEEEEEeeCCCcCCc
Confidence            9987643       58999999999999875

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.86  E-value=3.6e-22  Score=170.81  Aligned_cols=157  Identities=15%  Similarity=0.076  Sum_probs=116.6

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.++..+...+  ..+.++.+|++|.++++++++       ++
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   84 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKV   84 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            357789999999999999999999999999999999986554333222  357889999999998888774       78


Q ss_pred             cEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHHc----C----CCeEEEecccCCC--CCCCCcHHHHH
Q 024290          150 HTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKAM----G----IQKYVFYSIHNCD--KHPEVPLMEIK  207 (269)
Q Consensus       150 d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~----~----v~r~V~~SS~~~~--~~~~~~y~~sK  207 (269)
                      |+||||||...            ++..+++|+.++.++++++...    +    ..+||++||....  ......|+.+|
T Consensus        85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK  164 (261)
T 3n74_A           85 DILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATK  164 (261)
T ss_dssp             CEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHH
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHH
Confidence            99999999532            1234568889988877776432    1    3479999998653  33345699999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+++.+.+.       .++++++++||.+.+++..
T Consensus       165 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  199 (261)
T 3n74_A          165 GWVVSVTKALAIELAPAKIRVVALNPVAGETPLLT  199 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEC--------
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhh
Confidence            999987642       6899999999999987643

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.86  E-value=4.4e-22  Score=172.37  Aligned_cols=154  Identities=13%  Similarity=0.136  Sum_probs=121.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c--cCCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R--DWGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      +++|++|||||+|+||+++++.|+++|++|++++|+.++..+..   .  ...+.++.+|++|.+++.++++       +
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56789999999999999999999999999999999865433221   1  1257889999999998887763       7


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH------cCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA------MGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~------~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      +|+||||||...           ++..+++|+.++.++++++..      .+.++||++||...  ......+|+.+|.+
T Consensus       102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa  181 (279)
T 3sju_A          102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHG  181 (279)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHH
Confidence            899999999532           234566899999998887654      46679999999765  33445679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+.       .|+++++|+||++.+++.
T Consensus       182 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~  213 (279)
T 3sju_A          182 VVGFTKSVGFELAKTGITVNAVCPGYVETPMA  213 (279)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEESSBCSHHH
T ss_pred             HHHHHHHHHHHHHhhCcEEEEEeeCcccchHH
Confidence            9987642       689999999999988753

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.86  E-value=5e-22  Score=170.34  Aligned_cols=156  Identities=14%  Similarity=0.072  Sum_probs=119.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+.+|++|||||+|+||++++++|+++|++|++++|+.++..+...   .  ..+.++.+|++|.+++.++++       
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG  105 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4778999999999999999999999999999999998654333221   1  247889999999999887763       


Q ss_pred             CccEEEEcCCCC-C-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHH
Q 024290          148 GVHTVIDCATGR-P-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (269)
Q Consensus       148 ~~d~vi~~ag~~-~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~  209 (269)
                      ++|+||||||.. .           ++..+++|+.++.++++++    ++.+.++||++||....  ..+...|+.+|.+
T Consensus       106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  185 (262)
T 3rkr_A          106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWG  185 (262)
T ss_dssp             CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHH
Confidence            589999999952 1           1235678999988887775    44567899999998653  3445679999999


Q ss_pred             HHHHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          210 TEQFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       210 ~e~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      ++.+++       ..|+++++++||.+.+++..
T Consensus       186 ~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~  218 (262)
T 3rkr_A          186 LNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV  218 (262)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCC------
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEecCCCcCCccc
Confidence            998764       26899999999999887543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.86  E-value=7.9e-22  Score=170.26  Aligned_cols=156  Identities=15%  Similarity=0.120  Sum_probs=119.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      .+.+|+++||||+|+||++++++|+++|++|++++|+.+...+...+  .++.++.+|++|++++.++++       ++|
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            36678999999999999999999999999999999986544333222  368899999999999888774       799


Q ss_pred             EEEEcCCCCC------------CccchhhcHHHHHHHHHHHH----HcC--CCeEEEecccCCC--CCCCCcHHHHHHHH
Q 024290          151 TVIDCATGRP------------EEPIKKVDWEGKVALIQCAK----AMG--IQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (269)
Q Consensus       151 ~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~----~~~--v~r~V~~SS~~~~--~~~~~~y~~sK~~~  210 (269)
                      +||||||...            ++..+++|+.++.++++++.    +.+  .++||++||....  ..+...|+.+|.++
T Consensus       105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~  184 (272)
T 4dyv_A          105 VLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAI  184 (272)
T ss_dssp             EEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHH
Confidence            9999999532            13456789999877777663    333  4699999998653  34456799999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+.+.       .|+++++|+||.+.+++..
T Consensus       185 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  216 (272)
T 4dyv_A          185 TGLTKSTSLDGRVHDIACGQIDIGNADTPMAQ  216 (272)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEEEECC-----
T ss_pred             HHHHHHHHHHhCccCEEEEEEEECcccChhhh
Confidence            987643       6899999999999987643

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.86  E-value=6.7e-22  Score=168.36  Aligned_cols=151  Identities=16%  Similarity=0.098  Sum_probs=117.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------CccEEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVHTVID  154 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d~vi~  154 (269)
                      |+++||||+|+||+++++.|+++|++|++++|+.++..+...+  ..+.++.+|++|++++.++++       ++|+|||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            5799999999999999999999999999999976543332221  257889999999999988864       6899999


Q ss_pred             cCCCCC------------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh
Q 024290          155 CATGRP------------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       155 ~ag~~~------------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~  216 (269)
                      |||...            ++..+++|+.++.++++++.    +.+.++||++||....  ..+...|+.+|.+++.+.+.
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~  160 (248)
T 3asu_A           81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN  160 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHHH
Confidence            999531            12356789889888777764    4567899999997643  33456799999999987643


Q ss_pred             -------cCCCEEEEEcCccc-ccCc
Q 024290          217 -------SGLPHVIIRLWPYW-AICS  234 (269)
Q Consensus       217 -------~gi~~~ilrp~~i~-g~~~  234 (269)
                             .|+++++|+||++. +++.
T Consensus       161 la~e~~~~gi~v~~v~PG~v~gT~~~  186 (248)
T 3asu_A          161 LRTDLHGTAVRVTDIEPGLVGGTEFS  186 (248)
T ss_dssp             HHHHTTTSCCEEEEEEECSBCC----
T ss_pred             HHHHhhhcCcEEEEEeccccccCcch
Confidence                   58999999999999 5653

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.86  E-value=3.3e-22  Score=171.72  Aligned_cols=154  Identities=16%  Similarity=0.123  Sum_probs=122.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...     ...+.++.+|++|++++.++++       
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4788999999999999999999999999999999997654333221     1257889999999999888764       


Q ss_pred             CccEEEEcCCCC-C-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 GVHTVIDCATGR-P-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 ~~d~vi~~ag~~-~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      ++|+||||||.. .           ++..+++|+.++.++++++.    +.+ ++||++||...  .......|+.+|.+
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa  166 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSA  166 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHH
Confidence            789999999852 1           23456789999988887764    334 79999999764  33445679999999


Q ss_pred             HHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+       ..|+++++++||+++++..
T Consensus       167 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  198 (264)
T 3ucx_A          167 LLAMSQTLATELGEKGIRVNSVLPGYIWGGTL  198 (264)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEESSCBSHHH
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecCccccccH
Confidence            998764       2789999999999998753

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.86  E-value=4.7e-22  Score=171.78  Aligned_cols=157  Identities=17%  Similarity=0.090  Sum_probs=122.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC------------Cccc---cc--cCCCEEEEcCCCCCCc
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA------------PADF---LR--DWGATVVNADLSKPET  141 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~------------~~~~---~~--~~~~~~i~~Dl~d~~~  141 (269)
                      .++.+|++|||||+|+||+++++.|+++|++|++++|+.+.            ..+.   +.  ...+.++++|++|+++
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   88 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            45789999999999999999999999999999999987321            1110   11  1357889999999999


Q ss_pred             HHHHhc-------CccEEEEcCCCCC-------CccchhhcHHHHHHHHHHHH----HcC-CCeEEEecccCCCC-----
Q 024290          142 IPATLV-------GVHTVIDCATGRP-------EEPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNCDK-----  197 (269)
Q Consensus       142 l~~~~~-------~~d~vi~~ag~~~-------~~~~~~~n~~~~~~li~a~~----~~~-v~r~V~~SS~~~~~-----  197 (269)
                      +.++++       ++|+||||||...       ++..+++|+.++.++++++.    +.+ .++||++||.....     
T Consensus        89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  168 (278)
T 3sx2_A           89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSA  168 (278)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccC
Confidence            888874       7999999999532       24567789999998888764    333 46999999976432     


Q ss_pred             -CCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          198 -HPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       198 -~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                       .+...|+.+|.+++.+.+.       .|+++++|+||++++++..
T Consensus       169 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~  214 (278)
T 3sx2_A          169 DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMIN  214 (278)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS
T ss_pred             CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccch
Confidence             1234599999999987643       6899999999999998643

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.86  E-value=9e-22  Score=168.13  Aligned_cols=151  Identities=17%  Similarity=0.151  Sum_probs=118.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c--cCCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R--DWGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      +|+++||||+|+||+++++.|+++|++|++++|+.++..+..   .  ...+.++.+|++|.+++.++++       ++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            578999999999999999999999999999999764432221   1  1247789999999999888775       799


Q ss_pred             EEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHH----HcC-CCeEEEecccCCC--CCCCCcHHHHHHHHHH
Q 024290          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       151 ~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~----~~~-v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~  212 (269)
                      +||||||....           +..+++|+.++.++++++.    +.+ .++||++||....  ......|+.+|.+++.
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  161 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  161 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHH
Confidence            99999995321           2356788888877766654    345 5799999987542  3344579999999998


Q ss_pred             HHHh-------cCCCEEEEEcCcccccC
Q 024290          213 FLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       213 ~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+.       .|+++++|+||++.+++
T Consensus       162 ~~~~la~e~~~~gi~v~~v~PG~v~t~~  189 (256)
T 1geg_A          162 LTQTAARDLAPLGITVNGYCPGIVKTPM  189 (256)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             HHHHHHHHHHHcCeEEEEEEECCCccch
Confidence            7643       68999999999999875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.86  E-value=1.8e-21  Score=167.64  Aligned_cols=156  Identities=10%  Similarity=0.009  Sum_probs=123.9

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-cc---cccc--CCCEEEEcCCCCCCcHHHHhc-----
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-AD---FLRD--WGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~---~~~~--~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      ..+++|++|||||+|+||++++++|+++|++|++++++..+. .+   .+..  ..+.++.+|++|.+++.++++     
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            357889999999999999999999999999999988764322 11   1111  357889999999999888764     


Q ss_pred             --CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHcCC--CeEEEecccCC---CCCCCCcHHHHHHH
Q 024290          148 --GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAMGI--QKYVFYSIHNC---DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 --~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~~v--~r~V~~SS~~~---~~~~~~~y~~sK~~  209 (269)
                        ++|+||||||...           ++..+++|+.++.++++++.....  ++||++||...   ...+...|+.+|.+
T Consensus        94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa  173 (270)
T 3is3_A           94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGA  173 (270)
T ss_dssp             HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHHHHHH
Confidence              7899999999532           234567899999999999877543  49999999763   33455679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+.       .|++++.|+||++.+++.
T Consensus       174 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  205 (270)
T 3is3_A          174 VDSFVRIFSKDCGDKKITVNAVAPGGTVTDMF  205 (270)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCSTTH
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeCCccChhh
Confidence            9987643       689999999999998764

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.86  E-value=1.3e-21  Score=168.27  Aligned_cols=150  Identities=16%  Similarity=0.003  Sum_probs=120.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-------cCccE
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-------VGVHT  151 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-------~~~d~  151 (269)
                      ..+++|+++||||+|+||+++++.|+++|++|++++|+.+...+.      ..+.+|++|.+++.+++       .++|+
T Consensus        24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~------~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~   97 (266)
T 3uxy_A           24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD------LHLPGDLREAAYADGLPGAVAAGLGRLDI   97 (266)
T ss_dssp             --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS------EECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh------hccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            357889999999999999999999999999999999986654332      34578999988877665       37999


Q ss_pred             EEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 024290          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       152 vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~  214 (269)
                      ||||||...           ++..+++|+.++.++++++    ++.+.++||++||....  ..+...|+.+|.+++.+.
T Consensus        98 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~  177 (266)
T 3uxy_A           98 VVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLT  177 (266)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHHH
Confidence            999999532           2345668999999888887    56677899999998653  334567999999999876


Q ss_pred             Hh-------cCCCEEEEEcCcccccCc
Q 024290          215 QD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       215 ~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.       .|+++++|+||++++++.
T Consensus       178 ~~la~e~~~~gI~vn~v~PG~v~T~~~  204 (266)
T 3uxy_A          178 QCMGMDHAPQGIRINAVCPNEVNTPML  204 (266)
T ss_dssp             HHHHHHHGGGTEEEEEEEESSBCCHHH
T ss_pred             HHHHHHhhhcCcEEEEEeeCCCcchHh
Confidence            43       589999999999998753

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.86  E-value=1e-21  Score=167.93  Aligned_cols=151  Identities=17%  Similarity=0.158  Sum_probs=119.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC--Ccccc---c--cCCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA--PADFL---R--DWGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~--~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      +|+++||||+|+||+++++.|+++|++|++++|+.+.  ..+..   .  ..++.++.+|++|++++.++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999997654  22211   1  1257889999999998887764       7


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cCC-CeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MGI-QKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~v-~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      +|+||||||...           ++..+++|+.++.++++++.+    .+. ++||++||...  .......|+.+|.++
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV  161 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHH
Confidence            999999999532           223567888898888777754    466 89999999764  234456799999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccC
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+.+.       .|+++++++||++.+++
T Consensus       162 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  191 (258)
T 3a28_C          162 RGLTQAAAQELAPKGHTVNAYAPGIVGTGM  191 (258)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBCSHH
T ss_pred             HHHHHHHHHHHHhhCeEEEEEECCccCChh
Confidence            987643       58999999999998875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.86  E-value=1.4e-21  Score=168.79  Aligned_cols=155  Identities=16%  Similarity=0.089  Sum_probs=122.4

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---ccc--CCCEEEEcCCCCCCcHHHHh------c
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD--WGATVVNADLSKPETIPATL------V  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~------~  147 (269)
                      ..+++|+++||||+|+||+++++.|+++|++|++++|+. ...+.   +..  ..+.++.+|++|.+++.++.      .
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR  105 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            457889999999999999999999999999999999753 22211   112  24778999999998887765      3


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||...  +..+...|+.+|.++
T Consensus       106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~  185 (273)
T 3uf0_A          106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAV  185 (273)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHH
Confidence            7999999999532           2345678999998888876    4557789999999765  334456799999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.+.       .|+++++|+||+++++..
T Consensus       186 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  216 (273)
T 3uf0_A          186 VGLTRALASEWAGRGVGVNALAPGYVVTANT  216 (273)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCcCCch
Confidence            987643       689999999999998754

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.86  E-value=4.3e-22  Score=169.98  Aligned_cols=156  Identities=14%  Similarity=0.037  Sum_probs=123.5

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHh-------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      .++++|+++||||+++||+++++.|+++|++|++.+|+.+...+..   .+  .++..+++|++|++++++++       
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            3688999999999999999999999999999999999865443322   22  24778899999999988776       


Q ss_pred             cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HH-cCCCeEEEecccCCC--CCCCCcHHHHHH
Q 024290          147 VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KA-MGIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (269)
Q Consensus       147 ~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~-~~v~r~V~~SS~~~~--~~~~~~y~~sK~  208 (269)
                      .++|++|||||...           |+..+++|+.++..+.+++    ++ .+.++||++||....  .....+|+.+|.
T Consensus        85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKa  164 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKG  164 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence            46899999999432           3455678988887776655    33 345799999998652  334557999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++..+.+.       .||+++.|.||.+.+++.
T Consensus       165 al~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~  197 (255)
T 4g81_D          165 GIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMN  197 (255)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCCCCCchh
Confidence            99987653       799999999999988754

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.86  E-value=1.5e-21  Score=168.62  Aligned_cols=155  Identities=15%  Similarity=0.134  Sum_probs=122.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+...     ...+.++.+|++|.+++.++++       
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG  110 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4778999999999999999999999999999999998665332211     2257889999999998888774       


Q ss_pred             CccEEEEcCCCCCC-------------ccchhhcHHH----HHHHHHHHHHcCCCeEEEecccCCCC----CCCCcHHHH
Q 024290          148 GVHTVIDCATGRPE-------------EPIKKVDWEG----KVALIQCAKAMGIQKYVFYSIHNCDK----HPEVPLMEI  206 (269)
Q Consensus       148 ~~d~vi~~ag~~~~-------------~~~~~~n~~~----~~~li~a~~~~~v~r~V~~SS~~~~~----~~~~~y~~s  206 (269)
                      ++|+||||||....             +..+++|+.+    ++.+++.+++.+.++||++||.....    .+..+|+.+
T Consensus       111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~s  190 (279)
T 3ctm_A          111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTA  190 (279)
T ss_dssp             CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHH
T ss_pred             CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHH
Confidence            48999999984322             1245678888    45677777777888999999986532    334579999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      |.++|.+++.       .+ ++++++||++.+++..
T Consensus       191 K~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~  225 (279)
T 3ctm_A          191 KAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITD  225 (279)
T ss_dssp             HHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTS
T ss_pred             HHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccc
Confidence            9999988753       46 8999999999988643

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.86  E-value=1.8e-21  Score=169.95  Aligned_cols=164  Identities=12%  Similarity=0.026  Sum_probs=126.8

Q ss_pred             ccCCCCCCCCCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCCCCCcc---ccc-cCCCEEEEcCCCCCCcHHHH
Q 024290           72 AVNMSPGTPVRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR-DWGATVVNADLSKPETIPAT  145 (269)
Q Consensus        72 ~~~~~~~~~~~~~~vlVtGatG--~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~---~~~-~~~~~~i~~Dl~d~~~l~~~  145 (269)
                      +..|.+.+.+++|+++||||+|  +||+++++.|+++|++|++++|+.+....   ... ...+.++++|++|.++++++
T Consensus        19 p~sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   98 (296)
T 3k31_A           19 PGSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNM   98 (296)
T ss_dssp             --CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHH
T ss_pred             CccccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHH
Confidence            3344555568899999999997  99999999999999999999997532211   111 12468899999999998887


Q ss_pred             hc-------CccEEEEcCCCCC---------------CccchhhcHHHHHHHHHHHHHcC--CCeEEEecccCC--CCCC
Q 024290          146 LV-------GVHTVIDCATGRP---------------EEPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNC--DKHP  199 (269)
Q Consensus       146 ~~-------~~d~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~~--v~r~V~~SS~~~--~~~~  199 (269)
                      ++       ++|+||||||...               ++..+++|+.++.++++++...-  .++||++||...  ....
T Consensus        99 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~  178 (296)
T 3k31_A           99 FKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPH  178 (296)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT
T ss_pred             HHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCC
Confidence            73       7899999999542               22456689999999999987643  349999999764  3345


Q ss_pred             CCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          200 EVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       200 ~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      ...|+.+|.+++.+.+.       .|+++++|+||++.+++..
T Consensus       179 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  221 (296)
T 3k31_A          179 YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASS  221 (296)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCC
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhh
Confidence            57899999999987643       6899999999999987543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.86  E-value=7.7e-22  Score=170.34  Aligned_cols=154  Identities=14%  Similarity=0.097  Sum_probs=117.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc----CCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD----WGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~----~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      .|+ |+++||||+|+||+++++.|+++|++|++++|+.++..+...+    .++.++.+|++|.+++.++++       +
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            355 8999999999999999999999999999999986543322211    257889999999999988874       4


Q ss_pred             ccEEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCC-eEEEecccCCC--CCCCCcHHHHHHH
Q 024290          149 VHTVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQ-KYVFYSIHNCD--KHPEVPLMEIKYC  209 (269)
Q Consensus       149 ~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~-r~V~~SS~~~~--~~~~~~y~~sK~~  209 (269)
                      +|+||||||...            ++..+++|+.++.++++++    ++.+.+ +||++||....  ......|+.+|.+
T Consensus        98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa  177 (272)
T 2nwq_A           98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAF  177 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHH
Confidence            699999999532            1234668888877766555    455677 99999997653  3344679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+.       .|+++++|+||++.+++.
T Consensus       178 ~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~  209 (272)
T 2nwq_A          178 VEQFSLNLRCDLQGTGVRVTNLEPGLCESEFS  209 (272)
T ss_dssp             HHHHHHHHHTTCTTSCCEEEEEEECSBC----
T ss_pred             HHHHHHHHHHHhCccCeEEEEEEcCCCcCcch
Confidence            9988753       589999999999998864

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.86  E-value=1.3e-21  Score=160.80  Aligned_cols=137  Identities=14%  Similarity=0.121  Sum_probs=114.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcC---ccEEEEcCCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVG---VHTVIDCATGRP  160 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~---~d~vi~~ag~~~  160 (269)
                      |+++||||+|+||++++++|+ +|++|++++|+.+            .+.+|++|++++++++++   +|+||||||...
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~   70 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSAT   70 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            479999999999999999999 9999999999753            468999999999888764   899999999432


Q ss_pred             C-----------ccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHHh------cC
Q 024290          161 E-----------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQD------SG  218 (269)
Q Consensus       161 ~-----------~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~~------~g  218 (269)
                      .           ...+++|+.++.++++++.+.   + ++||++||...  +..+..+|+.+|.++|.+++.      .|
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~e~~~g  149 (202)
T 3d7l_A           71 FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRG  149 (202)
T ss_dssp             CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHTTSCSTT
T ss_pred             CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHHHHccCC
Confidence            1           234568999999999999776   4 69999998754  234456799999999998764      38


Q ss_pred             CCEEEEEcCcccccCc
Q 024290          219 LPHVIIRLWPYWAICS  234 (269)
Q Consensus       219 i~~~ilrp~~i~g~~~  234 (269)
                      ++++++|||++++++.
T Consensus       150 i~v~~v~pg~v~~~~~  165 (202)
T 3d7l_A          150 IRINTVSPNVLEESWD  165 (202)
T ss_dssp             CEEEEEEECCBGGGHH
T ss_pred             eEEEEEecCccCCchh
Confidence            9999999999999864

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.86  E-value=4.7e-22  Score=171.43  Aligned_cols=154  Identities=12%  Similarity=-0.007  Sum_probs=120.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+|+||||+|+||+++++.|+++|++|++++|+.+...+..   .  ..++.++.+|++|.+++.++++       
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG  107 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            477899999999999999999999999999999999764433221   1  1257889999999998887764       


Q ss_pred             CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCCCC--CCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDKH--PEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~~~--~~~~y~~sK~~~  210 (269)
                      ++|+||||||....           +..+++|+.++.++++++    ++.+.++||++||......  +...|+.+|.++
T Consensus       108 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  187 (272)
T 1yb1_A          108 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAA  187 (272)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHH
T ss_pred             CCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHH
Confidence            78999999995332           235668888877766655    4567789999999865332  335699999999


Q ss_pred             HHHHHh----------cCCCEEEEEcCcccccC
Q 024290          211 EQFLQD----------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~~----------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+++.          .|+++++|+||++.+++
T Consensus       188 ~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~  220 (272)
T 1yb1_A          188 VGFHKTLTDELAALQITGVKTTCLCPNFVNTGF  220 (272)
T ss_dssp             HHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS
T ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCc
Confidence            887642          38999999999998876

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.86  E-value=1.9e-22  Score=170.36  Aligned_cols=154  Identities=17%  Similarity=0.100  Sum_probs=118.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------CccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d~  151 (269)
                      |++|+++||||+|+||++++++|+++|++|++++|+.++..+....  .++.++.+|++|.++++++++       ++|+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            4578999999999999999999999999999999986543322211  157889999999998887764       6899


Q ss_pred             EEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 024290          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       152 vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~  215 (269)
                      ||||||...           ++..+++|+.++..+++++...   ..++||++||....  ......|+.+|.+++.+.+
T Consensus        81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  160 (235)
T 3l6e_A           81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLE  160 (235)
T ss_dssp             EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHH
Confidence            999999522           2345678999998888887432   11399999997653  2334579999999998765


Q ss_pred             h-------cCCCEEEEEcCcccccCc
Q 024290          216 D-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .       .|++++.++||.+.+++.
T Consensus       161 ~la~e~~~~gi~v~~v~PG~v~T~~~  186 (235)
T 3l6e_A          161 SLRAELKDSPLRLVNLYPSGIRSEFW  186 (235)
T ss_dssp             HHHHHTTTSSEEEEEEEEEEECCCC-
T ss_pred             HHHHHhhccCCEEEEEeCCCccCcch
Confidence            3       689999999999988753

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.86  E-value=1.1e-21  Score=170.07  Aligned_cols=156  Identities=16%  Similarity=0.124  Sum_probs=116.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Cccc---cc--cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADF---LR--DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~---~~--~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+... ..+.   +.  ...+.++++|++|++++.++++      
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999974332 2211   11  1357889999999999988874      


Q ss_pred             -CccEEEEcCCCC--C-----------CccchhhcHHHHHHHHHHHHH----cC---CCeEEEecccCC--CCCCCCcHH
Q 024290          148 -GVHTVIDCATGR--P-----------EEPIKKVDWEGKVALIQCAKA----MG---IQKYVFYSIHNC--DKHPEVPLM  204 (269)
Q Consensus       148 -~~d~vi~~ag~~--~-----------~~~~~~~n~~~~~~li~a~~~----~~---v~r~V~~SS~~~--~~~~~~~y~  204 (269)
                       ++|+||||||..  .           ++..+++|+.++.++++++..    .+   .++||++||...  .......|+
T Consensus       106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  185 (280)
T 4da9_A          106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYC  185 (280)
T ss_dssp             SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHH
T ss_pred             CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHH
Confidence             799999999951  1           234567899999888777643    23   468999999765  334456799


Q ss_pred             HHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          205 EIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       205 ~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+|.+++.+.+.       .|+++++|+||++.+++..
T Consensus       186 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  223 (280)
T 4da9_A          186 MSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTA  223 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchh
Confidence            999999987643       6899999999999988644

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.86  E-value=2.9e-21  Score=167.38  Aligned_cols=154  Identities=13%  Similarity=0.057  Sum_probs=123.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc----cccc--CCCEEEEcCCCCCCcHHHHh-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~----~~~~--~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+    .+..  ..+.++.+|++|.+++.+++       
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF  105 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999997543211    1121  25788999999998887765       


Q ss_pred             cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCCC--C-CCCcHHHHHHHH
Q 024290          147 VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK--H-PEVPLMEIKYCT  210 (269)
Q Consensus       147 ~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~~--~-~~~~y~~sK~~~  210 (269)
                      .++|+||||||...           ++..+++|+.++.++++++.+.  +.++||++||.....  . +...|+.+|.++
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~  185 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAI  185 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHHHH
Confidence            37899999999532           2345678999999999999876  567999999976532  2 256799999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccC
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+.+.       .|+++++|+||++.+++
T Consensus       186 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  215 (283)
T 1g0o_A          186 ETFARCMAIDMADKKITVNVVAPGGIKTDM  215 (283)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCcccchh
Confidence            987652       68999999999999875

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.86  E-value=6.5e-22  Score=167.25  Aligned_cols=152  Identities=14%  Similarity=0.143  Sum_probs=116.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-eCCCCCCcccc---c--cCCCEE-EEcCCCCCCcHHHHh-------cC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADFL---R--DWGATV-VNADLSKPETIPATL-------VG  148 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~~---~--~~~~~~-i~~Dl~d~~~l~~~~-------~~  148 (269)
                      +|+|+||||+|+||++++++|+++|++|+++ +|+.++..+..   .  ..++.. +.+|++|.+++++++       .+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999998 77654332211   1  124566 899999999888775       47


Q ss_pred             ccEEEEcCCCCCC-----------ccchhhcHHHHHH----HHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          149 VHTVIDCATGRPE-----------EPIKKVDWEGKVA----LIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       149 ~d~vi~~ag~~~~-----------~~~~~~n~~~~~~----li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      +|+||||||....           +..+++|+.++.+    +++.+++.+.++||++||...  +..+..+|+.+|.+++
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLI  160 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHH
Confidence            9999999995321           2456688888555    445556667889999999743  3344568999999998


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccCc
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.+.       .|++++++|||++++++.
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  190 (245)
T 2ph3_A          161 GFTRAVAKEYAQRGITVNAVAPGFIETEMT  190 (245)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             HHHHHHHHHHHHcCeEEEEEEEEeecCcch
Confidence            77643       489999999999998754

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.86  E-value=8.7e-22  Score=169.18  Aligned_cols=155  Identities=10%  Similarity=-0.029  Sum_probs=123.0

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHh-----
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATL-----  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~-----  146 (269)
                      ..+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...       ...+.++.+|++|.+++.+++     
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999998654332211       124788999999999888776     


Q ss_pred             --cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHHHH
Q 024290          147 --VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIK  207 (269)
Q Consensus       147 --~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~sK  207 (269)
                        .++|+||||||...           ++..+++|+.++.++++++..    .+.++||++||...  .......|+.+|
T Consensus        84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  163 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAAR  163 (265)
T ss_dssp             HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHH
Confidence              37899999999532           234567899999998888743    44568999998764  333456799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .+++.+.+.       .|++++.|+||++.++.
T Consensus       164 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  196 (265)
T 3lf2_A          164 AGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQ  196 (265)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCcCch
Confidence            999987643       58999999999998874

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.86  E-value=1.1e-21  Score=168.37  Aligned_cols=157  Identities=15%  Similarity=0.046  Sum_probs=121.9

Q ss_pred             CCCCCCEEEEECCCc-HHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCCCCCCcHHHHhc----
Q 024290           79 TPVRPTSILVVGATG-TLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV----  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG-~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl~d~~~l~~~~~----  147 (269)
                      ..+++|+++||||+| +||++++++|+++|++|++++|+.++..+...      ..++.++.+|++|.+++.++++    
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            357889999999997 79999999999999999999998654332211      1358899999999999888764    


Q ss_pred             ---CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc-----CCCeEEEecccCC--CCCCCCcHHHH
Q 024290          148 ---GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM-----GIQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       148 ---~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~-----~v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                         ++|+||||||...           ++..+++|+.++.++++++...     +.++||++||...  ...+...|+.+
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  177 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAA  177 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHH
Confidence               6899999999532           2235678889988888887543     4568999998764  34456679999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      |.+++.+.+.       .|+++++++||++.+++..
T Consensus       178 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  213 (266)
T 3o38_A          178 KAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLE  213 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC----
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhh
Confidence            9999987642       6899999999999987643

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.86  E-value=5.4e-22  Score=169.29  Aligned_cols=154  Identities=14%  Similarity=0.062  Sum_probs=119.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc--cCCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--DWGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--~~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.++..+..+  ..++.++++|++|++++.++++       ++|
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   82 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999999999999999999999999999999997654332222  1357889999999998877764       579


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHH----HHHHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~----a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~  213 (269)
                      +||||||...           ++..+++|+.++..+.+    .+++.+ ++||++||....  ..+...|+.+|.+++.+
T Consensus        83 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  161 (253)
T 1hxh_A           83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSAL  161 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHHHH
Confidence            9999999532           12345678777665555    445556 899999997653  33445799999999987


Q ss_pred             HHh-------c--CCCEEEEEcCcccccCc
Q 024290          214 LQD-------S--GLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~~-------~--gi~~~ilrp~~i~g~~~  234 (269)
                      .+.       .  |+++++++||++++++.
T Consensus       162 ~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~  191 (253)
T 1hxh_A          162 TRAAALSCRKQGYAIRVNSIHPDGIYTPMM  191 (253)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEEESEECCHHH
T ss_pred             HHHHHHHhhhcCCCeEEEEEEeCCccCchh
Confidence            653       3  89999999999999853

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.86  E-value=8.1e-22  Score=170.89  Aligned_cols=155  Identities=16%  Similarity=0.076  Sum_probs=123.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+.+|++|||||+|+||+++++.|+++|++|++++|+.+...+..   .  ...+.++.+|++|++++.++++       
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG   84 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999865433222   1  1257788999999998888764       


Q ss_pred             CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC---CCCCCcHHHHHH
Q 024290          148 GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD---KHPEVPLMEIKY  208 (269)
Q Consensus       148 ~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~---~~~~~~y~~sK~  208 (269)
                      ++|+||||||...            ++..+++|+.++.++++++.    +.+.++||++||....   .....+|+.+|.
T Consensus        85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKa  164 (280)
T 3tox_A           85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKA  164 (280)
T ss_dssp             CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHH
Confidence            7999999999431            23456789999888887763    4466799999997653   344567999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+.       .|+++++|+||.+.++..
T Consensus       165 a~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~  197 (280)
T 3tox_A          165 GLIGLVQALAVELGARGIRVNALLPGGTDTPAN  197 (280)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTS
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEECCCCCchh
Confidence            99987643       589999999999998754

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.86  E-value=4.9e-22  Score=175.36  Aligned_cols=156  Identities=12%  Similarity=0.003  Sum_probs=119.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-------CCCEEEEcCCCCCCcHHHHhc-----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-------WGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-------~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      .+.+|+||||||+|+||++++++|+++|++|++++|+.++..+....       ..+.++.+|++|.+++.++++     
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999986544332211       157889999999998888764     


Q ss_pred             --CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc----------CCCeEEEecccCCC--CCCCCc
Q 024290          148 --GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM----------GIQKYVFYSIHNCD--KHPEVP  202 (269)
Q Consensus       148 --~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~----------~v~r~V~~SS~~~~--~~~~~~  202 (269)
                        ++|+||||||...           ++..+++|+.++.++++++...          +.++||++||....  ......
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~  164 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGI  164 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHH
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHH
Confidence              6799999999532           2345678999999888877432          35689999998653  334457


Q ss_pred             HHHHHHHHHHHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          203 LMEIKYCTEQFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       203 y~~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      |+.+|.+++.+.+       ..|+++++|+||++.+++..
T Consensus       165 Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  204 (319)
T 3ioy_A          165 YNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYA  204 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccc
Confidence            9999998776653       36899999999999987643

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.86  E-value=1.4e-21  Score=168.01  Aligned_cols=155  Identities=14%  Similarity=0.053  Sum_probs=123.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+.++..+...      ...+.++++|++|+++++++++      
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF   96 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4778999999999999999999999999999999997654332211      2357899999999999888764      


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cC-CCeEEEecccCC--CCCCCCcHHHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHNC--DKHPEVPLMEIKY  208 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~-v~r~V~~SS~~~--~~~~~~~y~~sK~  208 (269)
                       ++|+||||||...           ++..+++|+.++.++++++..    .+ .++||++||...  .......|+.+|.
T Consensus        97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  176 (266)
T 4egf_A           97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKA  176 (266)
T ss_dssp             TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHH
Confidence             7999999999532           234567899998888877643    33 459999999765  3344567999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+.       .|++++.|+||++.+++.
T Consensus       177 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  209 (266)
T 4egf_A          177 GLVMATKVLARELGPHGIRANSVCPTVVLTEMG  209 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHH
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchh
Confidence            99987643       689999999999998753

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.86  E-value=4.7e-22  Score=170.28  Aligned_cols=154  Identities=14%  Similarity=0.092  Sum_probs=120.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-eCCCCCCccc---ccc--CCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      ++|++|||||+|+||+++++.|+++|++|+++ .|+.+...+.   +..  ..+.++.+|++|+++++++++       +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999997 6764433222   111  257889999999998887763       6


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      +|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||...  ...+...|+.+|.+++
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  162 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALE  162 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHH
Confidence            799999998422           2235678999988888777    4456679999999765  3345568999999999


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+.+.       .|+++++++||++.+++..
T Consensus       163 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~  193 (258)
T 3oid_A          163 ALTRYLAVELSPKQIIVNAVSGGAIDTDALK  193 (258)
T ss_dssp             HHHHHHHHHTGGGTEEEEEEEECCBCSGGGG
T ss_pred             HHHHHHHHHHhhcCcEEEEEeeCCCcChhhh
Confidence            87753       5899999999999987543

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.86  E-value=2.7e-21  Score=169.07  Aligned_cols=155  Identities=14%  Similarity=0.051  Sum_probs=121.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC------------ccc---cc--cCCCEEEEcCCCCCCcH
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP------------ADF---LR--DWGATVVNADLSKPETI  142 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~------------~~~---~~--~~~~~~i~~Dl~d~~~l  142 (269)
                      .+.+|+++||||+|+||+++++.|+++|++|++++|+++..            .+.   ++  ...+.++++|++|.+++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  104 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM  104 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            57889999999999999999999999999999999973211            111   11  12578899999999998


Q ss_pred             HHHhc-------CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHH----c-CCCeEEEecccCC--C
Q 024290          143 PATLV-------GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKA----M-GIQKYVFYSIHNC--D  196 (269)
Q Consensus       143 ~~~~~-------~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~----~-~v~r~V~~SS~~~--~  196 (269)
                      .++++       ++|+||||||...            ++..+++|+.++.++++++..    . +.++||++||...  .
T Consensus       105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~  184 (299)
T 3t7c_A          105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG  184 (299)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC
Confidence            88764       7999999999422            134567899999888887643    2 3569999999765  3


Q ss_pred             CCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          197 KHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       197 ~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ......|+.+|.+++.+.+.       .|+++++|+||++.+++.
T Consensus       185 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  229 (299)
T 3t7c_A          185 AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPML  229 (299)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccc
Confidence            34456799999999987643       589999999999998864

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.86  E-value=2.8e-21  Score=166.73  Aligned_cols=157  Identities=13%  Similarity=0.098  Sum_probs=123.9

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-cc---ccc--cCCCEEEEcCCCCCCcHHHHhc-----
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-AD---FLR--DWGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~---~~~--~~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      ..+++|+++||||+|+||+++++.|+++|++|++++++.... .+   .++  ...+.++.+|++|+++++++++     
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            457889999999999999999999999999999997764321 11   111  1257789999999999888774     


Q ss_pred             --CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC---CCCCCcHHHHHHH
Q 024290          148 --GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD---KHPEVPLMEIKYC  209 (269)
Q Consensus       148 --~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~---~~~~~~y~~sK~~  209 (269)
                        ++|+||||||...           ++..+++|+.++.++++++...  +.++||++||....   ..+...|+.+|.+
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa  186 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAA  186 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHHHHHHH
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHHHHHHH
Confidence              7999999999532           2345678999999999998765  34699999886432   3445679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      ++.+.+.       .|+++++|+||++.+++..
T Consensus       187 ~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  219 (271)
T 3v2g_A          187 LAGLTKGLARDLGPRGITVNIVHPGSTDTDMNP  219 (271)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSC
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEecCCCcCCccc
Confidence            9987643       5899999999999988643

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.85  E-value=7.6e-22  Score=168.72  Aligned_cols=155  Identities=15%  Similarity=0.045  Sum_probs=124.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.++..+..++  .++.++.+|++|.+++.+++       .++|
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID   84 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            47789999999999999999999999999999999986544333222  25788999999999887765       3789


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~  215 (269)
                      ++|||||...           ++..+++|+.++.++++++...  ..++||++||....  ..+...|+.+|.+++.+.+
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  164 (255)
T 4eso_A           85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFAS  164 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHH
Confidence            9999999532           2345678999999999998764  23589999997653  3445679999999998764


Q ss_pred             h-------cCCCEEEEEcCcccccCc
Q 024290          216 D-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .       .|++++.++||++.++..
T Consensus       165 ~la~e~~~~gi~vn~v~PG~v~T~~~  190 (255)
T 4eso_A          165 VLAAELLPRGIRVNSVSPGFIDTPTK  190 (255)
T ss_dssp             HHHHHTGGGTCEEEEEEECSBCCSST
T ss_pred             HHHHHHhhhCcEEEEEecCcccCccc
Confidence            3       589999999999998864

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.85  E-value=1.8e-21  Score=168.89  Aligned_cols=156  Identities=15%  Similarity=0.099  Sum_probs=119.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cc--cCCCEEEEcCCCCCCcHHHHh-------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--DWGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~--~~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      .+++|+|+||||+|+||+++++.|+++|++|++++|+.++..+.   +.  ...+.++.+|++|.+++++++       .
T Consensus        41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK  120 (285)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46789999999999999999999999999999998875433221   11  225778999999999988876       4


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++|+||||||...           ++..+++|+.++.++++++.    +.+.++||++||...  ...+...|+.+|.++
T Consensus       121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~  200 (285)
T 2c07_A          121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV  200 (285)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHH
Confidence            7899999999532           12456688888777666654    557789999999753  344566899999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+++.       .|+++++++||.+++++..
T Consensus       201 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  232 (285)
T 2c07_A          201 IGFTKSLAKELASRNITVNAIAPGFISSDMTD  232 (285)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCC----
T ss_pred             HHHHHHHHHHHHHhCcEEEEEEeCcEecCchh
Confidence            887643       5899999999999987543

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.85  E-value=2.9e-21  Score=164.71  Aligned_cols=154  Identities=18%  Similarity=0.074  Sum_probs=121.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCC--CCCCcHHHHhc----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADL--SKPETIPATLV----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl--~d~~~l~~~~~----  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+...      ...+.++.+|+  +|.+++.++++    
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999998654333221      12678999999  88888777663    


Q ss_pred             ---CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHH
Q 024290          148 ---GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       148 ---~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                         ++|+||||||...            ++..+++|+.++.++++++    ++.+.++||++||...  .......|+.+
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  168 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAAS  168 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHH
Confidence               7999999999521            1345678999998888877    5566789999999764  33445679999


Q ss_pred             HHHHHHHHHh------cCCCEEEEEcCcccccC
Q 024290          207 KYCTEQFLQD------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       207 K~~~e~~~~~------~gi~~~ilrp~~i~g~~  233 (269)
                      |.+++.+.+.      ..++++.+.||++.+++
T Consensus       169 K~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~  201 (252)
T 3f1l_A          169 KFATEGMMQVLADEYQQRLRVNCINPGGTRTAM  201 (252)
T ss_dssp             HHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH
T ss_pred             HHHHHHHHHHHHHHhcCCcEEEEEecCcccCch
Confidence            9999987643      23899999999998764

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.85  E-value=1.3e-21  Score=166.02  Aligned_cols=157  Identities=10%  Similarity=0.078  Sum_probs=124.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+..   .  ...+.++.+|++|+++++++++       
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999765433221   1  1257889999999999888763       


Q ss_pred             CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++|+||||||....           +..+++|+.++.++++++.    +.+.++||++||...  .......|+.+|.++
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (247)
T 3lyl_A           82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGV  161 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHH
Confidence            58999999995322           2456788899888877764    345679999999754  344567899999999


Q ss_pred             HHHHH-------hcCCCEEEEEcCcccccCccc
Q 024290          211 EQFLQ-------DSGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       211 e~~~~-------~~gi~~~ilrp~~i~g~~~~~  236 (269)
                      +.+.+       ..|+++++++||.+.+++...
T Consensus       162 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  194 (247)
T 3lyl_A          162 IGFSKSLAYEVASRNITVNVVAPGFIATDMTDK  194 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT
T ss_pred             HHHHHHHHHHHHHcCeEEEEEeeCcEecccchh
Confidence            88764       268999999999999886543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.85  E-value=7.3e-22  Score=169.62  Aligned_cols=153  Identities=14%  Similarity=0.054  Sum_probs=118.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cc----cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR----DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~----~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.++..+.   +.    ..++.++.+|++|++++.++++      
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999999999975432211   11    1247789999999998887764      


Q ss_pred             -CccEEEEcCCCCC---CccchhhcHHHHHH----HHHHHHHcC---CCeEEEecccCCC--CCCCCcHHHHHHHHHHHH
Q 024290          148 -GVHTVIDCATGRP---EEPIKKVDWEGKVA----LIQCAKAMG---IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       148 -~~d~vi~~ag~~~---~~~~~~~n~~~~~~----li~a~~~~~---v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~  214 (269)
                       ++|+||||||...   ++..+++|+.++..    +++.+++.+   .++||++||....  ......|+.+|.+++.+.
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  164 (267)
T 2gdz_A           85 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFT  164 (267)
T ss_dssp             SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHHHHH
Confidence             5799999999543   45567788886555    444554443   5799999997653  334557999999998766


Q ss_pred             H---------hcCCCEEEEEcCcccccC
Q 024290          215 Q---------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       215 ~---------~~gi~~~ilrp~~i~g~~  233 (269)
                      +         ..|+++++|+||++.+++
T Consensus       165 ~~~ala~e~~~~gi~v~~v~Pg~v~t~~  192 (267)
T 2gdz_A          165 RSAALAANLMNSGVRLNAICPGFVNTAI  192 (267)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred             HHHHHHHHhccCCcEEEEEecCcCcchh
Confidence            4         268999999999998875

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.85  E-value=6.7e-22  Score=168.56  Aligned_cols=145  Identities=12%  Similarity=0.091  Sum_probs=112.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc----CccEEEEcCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV----GVHTVIDCATG  158 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~----~~d~vi~~ag~  158 (269)
                      ||+|+||||+|+||+++++.|+++|++|++++|+.++...       . +.+|++|.++++++++    ++|+||||||.
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~   72 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGL   72 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCC
Confidence            4789999999999999999999999999999998654322       1 5689999999988875    46999999995


Q ss_pred             CC----CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC----------------------------CC--CC
Q 024290          159 RP----EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD----------------------------KH--PE  200 (269)
Q Consensus       159 ~~----~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~----------------------------~~--~~  200 (269)
                      ..    ++..+++|+.++.++++++.    +.+.++||++||....                            ..  +.
T Consensus        73 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (257)
T 1fjh_A           73 GPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN  152 (257)
T ss_dssp             CTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHH
T ss_pred             CCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCc
Confidence            43    45677899999998888775    4566899999997654                            11  23


Q ss_pred             CcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          201 VPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       201 ~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      ..|+.+|.+++.+++.       .|+++++|+||.+.+++..
T Consensus       153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  194 (257)
T 1fjh_A          153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQ  194 (257)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccch
Confidence            4699999999987643       6899999999999988643

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.85  E-value=6.1e-22  Score=169.28  Aligned_cols=156  Identities=15%  Similarity=0.104  Sum_probs=119.4

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc------CccEE
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV------GVHTV  152 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~------~~d~v  152 (269)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.++..+.+ ...+.++++|++|.+++.++++      ++|+|
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~l   83 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL-GDRARFAAADVTDEAAVASALDLAETMGTLRIV   83 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT-CTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            3477899999999999999999999999999999999644332222 2357899999999999888775      89999


Q ss_pred             EEcCCCCC---------------CccchhhcHHHHHHHHHHHHHc------------CCCeEEEecccCCCCC--CCCcH
Q 024290          153 IDCATGRP---------------EEPIKKVDWEGKVALIQCAKAM------------GIQKYVFYSIHNCDKH--PEVPL  203 (269)
Q Consensus       153 i~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~------------~v~r~V~~SS~~~~~~--~~~~y  203 (269)
                      |||||...               ++..+++|+.++.++++++...            +.++||++||......  +...|
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  163 (257)
T 3tl3_A           84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAY  163 (257)
T ss_dssp             EECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHH
T ss_pred             EECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccH
Confidence            99999421               3456779999999988887643            3458999999875332  33579


Q ss_pred             HHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          204 MEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       204 ~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+|.+++.+.+.       .|+++++++||.+.+++..
T Consensus       164 ~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~  202 (257)
T 3tl3_A          164 SASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLA  202 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhh
Confidence            9999999887642       6899999999999987644

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.85  E-value=1.5e-21  Score=169.72  Aligned_cols=153  Identities=11%  Similarity=0.123  Sum_probs=123.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHhc---
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATLV---  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~---~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~~---  147 (269)
                      +.+|+++||||+|+||+++++.|+++|+   +|++++|+.+...+..+       ...+.++.+|++|.++++++++   
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            6789999999999999999999999987   99999998654433221       2247789999999999988874   


Q ss_pred             ----CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHH
Q 024290          148 ----GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLME  205 (269)
Q Consensus       148 ----~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~  205 (269)
                          ++|+||||||...            ++..+++|+.++.++++++    ++.+.++||++||...  .......|+.
T Consensus       111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a  190 (287)
T 3rku_A          111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCA  190 (287)
T ss_dssp             GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHH
Confidence                6899999999432            2345678999998888877    4567789999999765  3344567999


Q ss_pred             HHHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          206 IKYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       206 sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +|.+++.+.+.       .|+++++|+||++.+++
T Consensus       191 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  225 (287)
T 3rku_A          191 SKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF  225 (287)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSH
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcc
Confidence            99999987643       68999999999998875

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.85  E-value=9.1e-22  Score=169.00  Aligned_cols=156  Identities=18%  Similarity=0.119  Sum_probs=123.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------Ccc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d  150 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++..+..++  .++.++.+|++|.+++.++++       ++|
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   82 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   82 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence            36789999999999999999999999999999999986544332222  257889999999998887764       589


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHcC--CCeEEEecccCCCC-CCCCcHHHHHHHHHHHHHh
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDK-HPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~~--v~r~V~~SS~~~~~-~~~~~y~~sK~~~e~~~~~  216 (269)
                      +||||||...           ++..+++|+.++.++++++....  .++||++||..... .....|+.+|.+++.+.+.
T Consensus        83 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~Y~asK~a~~~~~~~  162 (263)
T 2a4k_A           83 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLART  162 (263)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHHHHHCSSHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCCCcHHHHHHHHHHHHHHHH
Confidence            9999999422           13456799999999999987642  46999999987651 1234699999988877642


Q ss_pred             -------cCCCEEEEEcCcccccCcc
Q 024290          217 -------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       217 -------~gi~~~ilrp~~i~g~~~~  235 (269)
                             .|+++++|+||++.+++..
T Consensus       163 la~e~~~~gi~v~~v~PG~v~t~~~~  188 (263)
T 2a4k_A          163 LALELARKGVRVNVLLPGLIQTPMTA  188 (263)
T ss_dssp             HHHHHTTTTCEEEEEEECSBCCGGGT
T ss_pred             HHHHhhhhCcEEEEEEeCcCcCchhh
Confidence                   6899999999999988643

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.85  E-value=1.7e-21  Score=167.78  Aligned_cols=158  Identities=12%  Similarity=0.052  Sum_probs=121.9

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc----ccc--CCCEEEEcCCCCCCcHHHHhc-----
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LRD--WGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~~~--~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      +.+++|+|+||||+|+||++++++|+++|++|++++|+.++..+.    ++.  ..+.++++|++|.+++.++++     
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            357789999999999999999999999999999999964432221    111  257889999999998888774     


Q ss_pred             --CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHH
Q 024290          148 --GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (269)
Q Consensus       148 --~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~  208 (269)
                        ++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||...  +..+...|+.+|.
T Consensus       105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  184 (271)
T 4iin_A          105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKG  184 (271)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHH
Confidence              7999999999532           2345668888888777665    4456679999999754  3455678999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCccc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~~~  236 (269)
                      +++.+.+.       .++++++++||.+.+++...
T Consensus       185 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  219 (271)
T 4iin_A          185 GMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN  219 (271)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----
T ss_pred             HHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh
Confidence            99987642       68999999999999876443

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.85  E-value=4.5e-21  Score=162.90  Aligned_cols=152  Identities=13%  Similarity=0.072  Sum_probs=119.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHHh-------cCccEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATL-------VGVHTVI  153 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~-------~~~d~vi  153 (269)
                      |+|+||||||+++||+++++.|+++|++|++++|+++...+..++ .++..+++|++|++++++++       .++|++|
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            358999999999999999999999999999999986554443322 25788999999999888776       4799999


Q ss_pred             EcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh
Q 024290          154 DCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       154 ~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~  216 (269)
                      ||||...           ++..+++|+.++..+.+++    ++.+ ++||++||....  ......|+.+|.+++.+.+.
T Consensus        81 NNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~  159 (247)
T 3ged_A           81 NNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIVALTHA  159 (247)
T ss_dssp             ECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHHHHHHH
Confidence            9998432           3456778999888777665    3444 799999998652  33345799999999877643


Q ss_pred             ------cCCCEEEEEcCcccccCc
Q 024290          217 ------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 ------~gi~~~ilrp~~i~g~~~  234 (269)
                            .+++++.|.||++..+..
T Consensus       160 lA~ela~~IrVN~I~PG~i~t~~~  183 (247)
T 3ged_A          160 LAMSLGPDVLVNCIAPGWINVTEQ  183 (247)
T ss_dssp             HHHHHTTTSEEEEEEECSBCCCC-
T ss_pred             HHHHHCCCCEEEEEecCcCCCCCc
Confidence                  589999999999977643

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.85  E-value=2e-21  Score=169.75  Aligned_cols=154  Identities=10%  Similarity=0.094  Sum_probs=121.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc----------ccCCCEEEEcCCCCCCcHHHHhc--
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----------RDWGATVVNADLSKPETIPATLV--  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~----------~~~~~~~i~~Dl~d~~~l~~~~~--  147 (269)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+.+...+..          ...++.++.+|++|.+++.++++  
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            477899999999999999999999999999999999754332211          12357889999999999888774  


Q ss_pred             -----CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCCCC-CCCCcHHHH
Q 024290          148 -----GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNCDK-HPEVPLMEI  206 (269)
Q Consensus       148 -----~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~~~-~~~~~y~~s  206 (269)
                           ++|+||||||...           ++..+++|+.++.++++++..    .+.++||++||..... .....|+.+
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~Y~~s  174 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAA  174 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTTCHHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCCCcchhhHHH
Confidence                 5899999999432           123467899999999998754    2357899999887322 334579999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      |.+++.+.+.       .|++++++|||+++++.
T Consensus       175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  208 (303)
T 1yxm_A          175 RAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT  208 (303)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence            9999877642       48999999999999983

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.85  E-value=1.1e-21  Score=168.69  Aligned_cols=155  Identities=15%  Similarity=0.111  Sum_probs=117.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.++..+..   ..  ..+.++.+|++|.+++.++++       +
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999999865433322   11  246788999999998887763       7


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTE  211 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e  211 (269)
                      +|+||||||...           ++..+++|+.++..+++++    ++.+.++||++||....  ......|+.+|.+++
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~  161 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVR  161 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHH
Confidence            999999999532           2345678988988777665    44566799999998643  334567999999999


Q ss_pred             HHHHh-----cCCCEEEEEcCcccccCcc
Q 024290          212 QFLQD-----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       212 ~~~~~-----~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+.+.     .|+++++|+||++.+++..
T Consensus       162 ~l~~~la~e~~gIrvn~v~PG~v~T~~~~  190 (264)
T 3tfo_A          162 AISDGLRQESTNIRVTCVNPGVVESELAG  190 (264)
T ss_dssp             HHHHHHHHHCSSEEEEEEEECCC------
T ss_pred             HHHHHHHHhCCCCEEEEEecCCCcCcccc
Confidence            87643     3899999999999887643

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.85  E-value=1.6e-21  Score=167.75  Aligned_cols=155  Identities=15%  Similarity=0.078  Sum_probs=121.5

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHhc---C
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATLV---G  148 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~~---~  148 (269)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.+...+...       ...+..+.+|++|++.+.++++   +
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   85 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK   85 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence            35778999999999999999999999999999999998654332221       1236788999999988887764   7


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      +|++|||||...           ++..+++|+.++..+++++    ++.+.++||++||...  +......|+.+|.+++
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  165 (267)
T 3t4x_A           86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQL  165 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHH
Confidence            999999999532           2234678988977665554    5566679999999765  3345567999999999


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccC
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .+.+.       .|++++.++||.+.++.
T Consensus       166 ~l~~~la~e~~~~gi~vn~v~PG~v~t~~  194 (267)
T 3t4x_A          166 SLSRSLAELTTGTNVTVNTIMPGSTLTEG  194 (267)
T ss_dssp             HHHHHHHHHTTTSEEEEEEEEECCBCCHH
T ss_pred             HHHHHHHHHhCCCCeEEEEEeCCeecCcc
Confidence            87753       57999999999998864

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.85  E-value=9.1e-21  Score=162.57  Aligned_cols=150  Identities=18%  Similarity=0.094  Sum_probs=118.5

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-------cCccE
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-------VGVHT  151 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-------~~~d~  151 (269)
                      +++++|++|||||+++||+++++.|+++|++|++.+|+.++...     ....+++|++|++++++++       .++|+
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLP-----EELFVEADLTTKEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSC-----TTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCC-----cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46889999999999999999999999999999999997543211     3457899999999887765       46899


Q ss_pred             EEEcCCCCC-------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCCC-C--CCCcHHHHHHHHH
Q 024290          152 VIDCATGRP-------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK-H--PEVPLMEIKYCTE  211 (269)
Q Consensus       152 vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~~-~--~~~~y~~sK~~~e  211 (269)
                      +|||||...             ++..+++|+.++..+.+++    ++.+-++||++||..... .  ....|+.+|.+++
T Consensus        82 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~  161 (261)
T 4h15_A           82 IVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALS  161 (261)
T ss_dssp             EEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHH
T ss_pred             EEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHH
Confidence            999998421             2345678888877666554    556777999999976532 2  2356899999999


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccC
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .+.+.       .||+++.|.||++.+++
T Consensus       162 ~lt~~lA~Ela~~gIrVN~V~PG~i~T~~  190 (261)
T 4h15_A          162 TYSKAMSKEVSPKGVRVVRVSPGWIETEA  190 (261)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred             HHHHHHHHHhhhhCeEEEEEeCCCcCCcc
Confidence            87643       79999999999998764

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.85  E-value=1.3e-21  Score=165.46  Aligned_cols=153  Identities=14%  Similarity=0.115  Sum_probs=119.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-eCCCCCCccc---cc--cCCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADF---LR--DWGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~---~~--~~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      +|+|+||||+|+||++++++|+++|++|+++ .|+.+...+.   ++  ...+.++.+|++|++++.++++       ++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999995 6764332221   11  1246788999999999888875       78


Q ss_pred             cEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHH----cCCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          150 HTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKA----MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       150 d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~----~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      |+||||||....           +..+++|+.++.++++++.+    .+.++||++||...  +..+...|+.+|.+++.
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG  160 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHH
Confidence            999999995321           23567899998888887754    46789999999743  34456789999999987


Q ss_pred             HHHh-------cCCCEEEEEcCcccccCcc
Q 024290          213 FLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       213 ~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+.       .|+++++++||++++++..
T Consensus       161 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  190 (244)
T 1edo_A          161 FSKTAAREGASRNINVNVVCPGFIASDMTA  190 (244)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHH
T ss_pred             HHHHHHHHhhhcCCEEEEEeeCccccchhh
Confidence            7642       6899999999999987543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.85  E-value=9.7e-22  Score=168.45  Aligned_cols=155  Identities=17%  Similarity=0.148  Sum_probs=121.9

Q ss_pred             CCCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCCC---CCcccccc-CCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRP---APADFLRD-WGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~~---~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+  |+||+++++.|+++|++|++++|+.+   ...+.... ..+.++.+|++|++++.++++      
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999  99999999999999999999999753   11111111 237889999999998888764      


Q ss_pred             -CccEEEEcCCCCC---------------CccchhhcHHHHHHHHHHHHHcC--CCeEEEecccCCC--CCCCCcHHHHH
Q 024290          148 -GVHTVIDCATGRP---------------EEPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCD--KHPEVPLMEIK  207 (269)
Q Consensus       148 -~~d~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~~--v~r~V~~SS~~~~--~~~~~~y~~sK  207 (269)
                       ++|+||||||...               ++..+++|+.++.++++++.+.-  .++||++||....  ..+...|+.+|
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  164 (261)
T 2wyu_A           85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAK  164 (261)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHHHHHH
Confidence             7899999999532               12356789999999999987651  2599999997542  33455799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.+.+.       .|+++++++||+++++..
T Consensus       165 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  198 (261)
T 2wyu_A          165 AALEASVRYLAYELGPKGVRVNAISAGPVRTVAA  198 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGG
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchh
Confidence            999987643       489999999999999764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.85  E-value=1.1e-20  Score=164.01  Aligned_cols=154  Identities=14%  Similarity=0.195  Sum_probs=121.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc----------cc--cCCCEEEEcCCCCCCcHHHHh
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----------LR--DWGATVVNADLSKPETIPATL  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----------~~--~~~~~~i~~Dl~d~~~l~~~~  146 (269)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.++..+.          +.  ...+.++++|++|.+++.+++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            357889999999999999999999999999999999987643221          11  124788999999999988877


Q ss_pred             c-------CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc----CCCeEEEecccCCCC---CCCC
Q 024290          147 V-------GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNCDK---HPEV  201 (269)
Q Consensus       147 ~-------~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~----~v~r~V~~SS~~~~~---~~~~  201 (269)
                      +       ++|++|||||...           ++..+++|+.++.++++++...    +.++||++||.....   ....
T Consensus        85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  164 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPT  164 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCc
Confidence            4       7999999999532           2345569999999999988544    567999999976532   3446


Q ss_pred             cHHHHHHHHHHHHHh-------cCCCEEEEEcCc-cccc
Q 024290          202 PLMEIKYCTEQFLQD-------SGLPHVIIRLWP-YWAI  232 (269)
Q Consensus       202 ~y~~sK~~~e~~~~~-------~gi~~~ilrp~~-i~g~  232 (269)
                      .|+.+|.+++.+.+.       .|++++.|+||+ +.++
T Consensus       165 ~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~  203 (285)
T 3sc4_A          165 PYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA  203 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH
Confidence            799999999987642       689999999994 5443

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.85  E-value=2.9e-21  Score=162.30  Aligned_cols=153  Identities=11%  Similarity=0.082  Sum_probs=116.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhcCc----cEEEEcC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLVGV----HTVIDCA  156 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~~~----d~vi~~a  156 (269)
                      ||+++||||+|+||++++++|+++|++|++++|+.+...+....  ..+.++.+|++|.+++.++++.+    |+|||||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence            47899999999999999999999999999999986554433322  35789999999999999988654    9999999


Q ss_pred             CCCC-----------CccchhhcHHHHHHHHHHHHHcC---CCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh----
Q 024290          157 TGRP-----------EEPIKKVDWEGKVALIQCAKAMG---IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD----  216 (269)
Q Consensus       157 g~~~-----------~~~~~~~n~~~~~~li~a~~~~~---v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~----  216 (269)
                      |...           ++..+++|+.++.++++++....   ..+||++||....  ......|+.+|.+++.+.+.    
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e  160 (230)
T 3guy_A           81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLE  160 (230)
T ss_dssp             CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            9532           22356789999999888876532   2399999987653  34456799999999987643    


Q ss_pred             ---cCCCEEEEEcCcccccCcc
Q 024290          217 ---SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       217 ---~gi~~~ilrp~~i~g~~~~  235 (269)
                         .|++++.++||.+.+++..
T Consensus       161 ~~~~gi~v~~v~PG~v~t~~~~  182 (230)
T 3guy_A          161 LKGKPMKIIAVYPGGMATEFWE  182 (230)
T ss_dssp             TTTSSCEEEEEEECCC------
T ss_pred             HHhcCeEEEEEECCcccChHHH
Confidence               5899999999999887543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.85  E-value=4.8e-21  Score=162.34  Aligned_cols=156  Identities=17%  Similarity=0.121  Sum_probs=123.5

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-CccccccC--CCEEEEcCCCCCCcHHHHhc--CccEEE
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFLRDW--GATVVNADLSKPETIPATLV--GVHTVI  153 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~~~~~--~~~~i~~Dl~d~~~l~~~~~--~~d~vi  153 (269)
                      .++++|+++||||+++||+++++.|+++|++|++.+|+..+ ..+.+++.  .+..+++|++|+++++++++  ++|++|
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV   84 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILV   84 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            46899999999999999999999999999999999997542 12222222  47789999999999888774  689999


Q ss_pred             EcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcC-CCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH
Q 024290          154 DCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMG-IQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       154 ~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~-v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~  215 (269)
                      ||||...           |+..+++|+.++..+.+++    ++.+ .++||++||...  .......|+.+|.++..+.+
T Consensus        85 NNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr  164 (247)
T 4hp8_A           85 NNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTK  164 (247)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHH
Confidence            9999422           4456779999988877764    3444 469999999865  23344579999999998765


Q ss_pred             h-------cCCCEEEEEcCcccccCc
Q 024290          216 D-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .       .||+++.|.||++.+++.
T Consensus       165 ~lA~Ela~~gIrVNaV~PG~i~T~~~  190 (247)
T 4hp8_A          165 LLANEWAAKGINVNAIAPGYIETNNT  190 (247)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             HHHHHHhhcCeEEEEEeeCCCCCcch
Confidence            3       799999999999988754

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.85  E-value=4.1e-21  Score=166.57  Aligned_cols=153  Identities=14%  Similarity=0.066  Sum_probs=121.5

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---c-cc-CCCEEEEcCCCCCCcHHHHhc------
Q 024290           81 VRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAPADF---L-RD-WGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        81 ~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~-~~-~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      +.+|+++||||+  |+||+++++.|+++|++|++++|+.+ ..+.   + .. .++.++.+|++|.+++.++++      
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            678999999999  99999999999999999999999753 1111   1 11 236789999999998887764      


Q ss_pred             -CccEEEEcCCCCCC---------------ccchhhcHHHHHHHHHHHHHcC---CCeEEEecccCC--CCCCCCcHHHH
Q 024290          148 -GVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKAMG---IQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       148 -~~d~vi~~ag~~~~---------------~~~~~~n~~~~~~li~a~~~~~---v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                       ++|+||||||....               +..+++|+.++.++++++....   .++||++||...  .......|+.+
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  177 (285)
T 2p91_A           98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIA  177 (285)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHHHH
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHHHH
Confidence             78999999995421               2356789999999999987653   369999999754  23445679999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      |.+++.+.+.       .|+++++|+||++++++.
T Consensus       178 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  212 (285)
T 2p91_A          178 KAALESTVRYLAYDIAKHGHRINAISAGPVKTLAA  212 (285)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchh
Confidence            9999987643       589999999999999864

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.85  E-value=7.9e-21  Score=162.62  Aligned_cols=156  Identities=14%  Similarity=0.058  Sum_probs=123.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc--c--ccCCCEEEEcCCCCCCcHHHHh-------c
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF--L--RDWGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~--~--~~~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      +.+++|+++||||+++||+++++.|+++|++|++.+|+.++....  +  ...++.++.+|++|++++++++       .
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            468899999999999999999999999999999999987653211  1  1236889999999998887775       4


Q ss_pred             CccEEEEcCCCCC----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          148 GVHTVIDCATGRP----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       148 ~~d~vi~~ag~~~----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      ++|++|||||...          ++..+++|+.++..+.+++    ++.+ ++||++||...  .......|+.+|.+++
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~  161 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGNTSGYCASKGAQL  161 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSSCHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCCchHHHHHHHHHH
Confidence            7999999999422          3345678888877776665    3334 79999999864  3445567999999999


Q ss_pred             HHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          212 QFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       212 ~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+.+       ..||+++.|.||++.+++..
T Consensus       162 ~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~  192 (258)
T 4gkb_A          162 ALTREWAVALREHGVRVNAVIPAEVMTPLYR  192 (258)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCCSCC-
T ss_pred             HHHHHHHHHhcccCeEEEEEecCCCCChhHh
Confidence            8765       37999999999999887543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.85  E-value=3.6e-21  Score=162.35  Aligned_cols=149  Identities=15%  Similarity=0.086  Sum_probs=118.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc---------CccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---------GVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~---------~~d~  151 (269)
                      |++|+++||||+|+||++++++|+++|++|++++|+++....     ...++.+|++|.+++.++++         ++|+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc-----ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            457899999999999999999999999999999998665332     24667899999988877764         7999


Q ss_pred             EEEcCCCCC------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH
Q 024290          152 VIDCATGRP------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       152 vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~  215 (269)
                      ||||||...            ++..+++|+.++.++++++.+.  ..++||++||...  +..+...|+.+|.+++.+.+
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  155 (236)
T 1ooe_A           76 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTS  155 (236)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHHHHHHHH
Confidence            999999432            1234568999999999988764  2259999999764  23445679999999998764


Q ss_pred             h---------cCCCEEEEEcCcccccCc
Q 024290          216 D---------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ~---------~gi~~~ilrp~~i~g~~~  234 (269)
                      .         .|+++++++||++.+++.
T Consensus       156 ~la~e~~~~~~gi~v~~v~Pg~v~t~~~  183 (236)
T 1ooe_A          156 SLAAKDSGLPDNSAVLTIMPVTLDTPMN  183 (236)
T ss_dssp             HHHSTTSSCCTTCEEEEEEESCBCCHHH
T ss_pred             HHHHHhcccCCCeEEEEEecCcccCcch
Confidence            2         359999999999998753

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.85  E-value=1.9e-21  Score=167.46  Aligned_cols=154  Identities=15%  Similarity=0.104  Sum_probs=123.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      .+++|++|||||+++||+++++.|+++|++|++.+|+.+...+..++  .++..+++|++|++++++++       .++|
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD  105 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID  105 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999999987655444333  25788999999999888776       4789


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~  215 (269)
                      ++|||||...           |+..+++|+.++..+.+++...  .-++||++||...  ......+|+.+|.++..+.+
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr  185 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFAR  185 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHHHHHHHHH
Confidence            9999999422           3456779999999999888543  1248999998764  33445679999999998775


Q ss_pred             h-------cCCCEEEEEcCcccccC
Q 024290          216 D-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .       .||+++.|.||.+.+++
T Consensus       186 ~lA~Ela~~gIrVN~V~PG~i~T~~  210 (273)
T 4fgs_A          186 NWILDLKDRGIRINTLSPGPTETTG  210 (273)
T ss_dssp             HHHHHTTTSCEEEEEEEECSBCC--
T ss_pred             HHHHHhcccCeEEEEEeeCCCCChh
Confidence            3       78999999999998764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.85  E-value=8.6e-22  Score=170.77  Aligned_cols=157  Identities=15%  Similarity=0.099  Sum_probs=116.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc------CCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD------WGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~------~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+.+...+...+      ..+.++++|++|.+++.++++      
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999986543332211      124889999999998887763      


Q ss_pred             -CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHH----HcC--CCeEEEecccCC--CCCCCCcHHHH
Q 024290          148 -GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAK----AMG--IQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       148 -~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~----~~~--v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                       ++|+||||||...            ++..+++|+.++.++++++.    +.+  .++||++||...  ...+...|+.+
T Consensus       110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as  189 (281)
T 4dry_A          110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTAT  189 (281)
T ss_dssp             SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHH
Confidence             6899999999532            12356788888777766653    433  469999999764  33445679999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCccc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~~  236 (269)
                      |.+++.+.+.       .|+++++|+||++.+++...
T Consensus       190 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  226 (281)
T 4dry_A          190 KHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTAR  226 (281)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-----
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhh
Confidence            9999987643       68999999999999876543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.85  E-value=3.1e-22  Score=171.60  Aligned_cols=155  Identities=14%  Similarity=-0.012  Sum_probs=121.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-CCCeEEEEeCCCCCCcccc---c--cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALD-EGYDVRCLVRPRPAPADFL---R--DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~-~G~~V~~~~R~~~~~~~~~---~--~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +.+|+|+||||+|+||+++++.|++ +|++|++++|+.+...+..   .  ...+.++.+|++|.+++.++++       
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3568999999999999999999999 9999999999754332221   1  1357899999999998888775       


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHcC--CCeEEEecccCCC------------------
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCD------------------  196 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~~--v~r~V~~SS~~~~------------------  196 (269)
                      ++|+||||||...           ++..+++|+.++.++++++.+..  .++||++||....                  
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  161 (276)
T 1wma_A           82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET  161 (276)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred             CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccc
Confidence            7999999999432           12346789999999999997753  2499999986321                  


Q ss_pred             -------------------------CCCCCcHHHHHHHHHHHHHh-----------cCCCEEEEEcCcccccCcc
Q 024290          197 -------------------------KHPEVPLMEIKYCTEQFLQD-----------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       197 -------------------------~~~~~~y~~sK~~~e~~~~~-----------~gi~~~ilrp~~i~g~~~~  235 (269)
                                               ..+...|+.+|.+++.+++.           .|+++++++||++.+++..
T Consensus       162 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~  236 (276)
T 1wma_A          162 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  236 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             cchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC
Confidence                                     12347899999999877632           4899999999999987643

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.85  E-value=2.1e-20  Score=161.36  Aligned_cols=155  Identities=12%  Similarity=0.129  Sum_probs=120.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cc---------cCCCEEEEcCCCCCCcHHHHh
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR---------DWGATVVNADLSKPETIPATL  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~---------~~~~~~i~~Dl~d~~~l~~~~  146 (269)
                      +.+++|+++||||+|+||+++++.|+++|++|++++|+.++..+.   ++         ...+.++.+|++|.+++.+++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            357889999999999999999999999999999999986543221   11         124678999999999888776


Q ss_pred             c-------CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCCCC----CC
Q 024290          147 V-------GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCDKH----PE  200 (269)
Q Consensus       147 ~-------~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~~~----~~  200 (269)
                      +       ++|++|||||...           ++..+++|+.++..+++++.    +.+.++||++||......    ..
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  161 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAH  161 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHC
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCC
Confidence            3       7899999999532           23456799999988888774    345679999999865432    34


Q ss_pred             CcHHHHHHHHHHHHHh-------cCCCEEEEEcCc-ccccC
Q 024290          201 VPLMEIKYCTEQFLQD-------SGLPHVIIRLWP-YWAIC  233 (269)
Q Consensus       201 ~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~-i~g~~  233 (269)
                      ..|+.+|.+++.+.+.       .|+++++|+||+ +.+++
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~  202 (274)
T 3e03_A          162 TGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA  202 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC--
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch
Confidence            5699999999987643       689999999994 55543

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.85  E-value=9.4e-21  Score=161.31  Aligned_cols=150  Identities=15%  Similarity=0.105  Sum_probs=114.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh---cCccEEEEc
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL---VGVHTVIDC  155 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~---~~~d~vi~~  155 (269)
                      ..+.+|+++||||+|+||+++++.|+++|++|++++|+.+...+ +  ..+.++ +|+  .+++++++   .++|+||||
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-~--~~~~~~-~D~--~~~~~~~~~~~~~iD~lv~~   88 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-S--GHRYVV-CDL--RKDLDLLFEKVKEVDILVLN   88 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-T--CSEEEE-CCT--TTCHHHHHHHSCCCSEEEEC
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh-h--CCeEEE-eeH--HHHHHHHHHHhcCCCEEEEC
Confidence            35788999999999999999999999999999999997532221 1  135566 999  55666655   379999999


Q ss_pred             CCCCCC-----------ccchhhcHHHHHHH----HHHHHHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh--
Q 024290          156 ATGRPE-----------EPIKKVDWEGKVAL----IQCAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD--  216 (269)
Q Consensus       156 ag~~~~-----------~~~~~~n~~~~~~l----i~a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~--  216 (269)
                      ||....           +..+++|+.++.++    ++.+++.+.++||++||....  ..+...|+.+|.+++.+.+.  
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  168 (249)
T 1o5i_A           89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLS  168 (249)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHH
Confidence            995322           23456788776655    455566677899999998653  33446799999999877642  


Q ss_pred             -----cCCCEEEEEcCcccccCc
Q 024290          217 -----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 -----~gi~~~ilrp~~i~g~~~  234 (269)
                           .|+++++|+||++++++.
T Consensus       169 ~e~~~~gi~v~~v~Pg~v~t~~~  191 (249)
T 1o5i_A          169 FEVAPYGITVNCVAPGWTETERV  191 (249)
T ss_dssp             HHHGGGTEEEEEEEECSBCCTTH
T ss_pred             HHhhhcCeEEEEEeeCCCccCcc
Confidence                 689999999999999864

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.84  E-value=8.5e-21  Score=159.78  Aligned_cols=153  Identities=12%  Similarity=0.047  Sum_probs=119.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCCCCCCcHHHHhc-------Cc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADLSKPETIPATLV-------GV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl~d~~~l~~~~~-------~~  149 (269)
                      +|+++||||+|+||++++++|+++|++|++++|+.++..+...      ...+.++.+|++|++++.++++       ++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999998654332211      2357889999999999988875       78


Q ss_pred             cEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          150 HTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       150 d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      |+||||||...           ++..+++|+.++.++++++...   +.+++|++||...  .......|+.+|.+++.+
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~  161 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARAL  161 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHHHH
T ss_pred             CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHHHH
Confidence            99999999532           2235678999999888887542   3357777776543  233345799999999988


Q ss_pred             HHh-----cCCCEEEEEcCcccccCcc
Q 024290          214 LQD-----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       214 ~~~-----~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+.     .++++++++||++.+++..
T Consensus       162 ~~~l~~~~~~i~v~~v~PG~v~T~~~~  188 (235)
T 3l77_A          162 VRTFQIENPDVRFFELRPGAVDTYFGG  188 (235)
T ss_dssp             HHHHHHHCTTSEEEEEEECSBSSSTTT
T ss_pred             HHHHhhcCCCeEEEEEeCCcccccccc
Confidence            754     6899999999999887644

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.84  E-value=3.2e-21  Score=164.41  Aligned_cols=156  Identities=11%  Similarity=0.108  Sum_probs=119.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC-CCCCCccccc-----cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR-PRPAPADFLR-----DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R-~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      ...+|+||||||+|+||++++++|+++|++|+++++ +.+...+...     ...+.++.+|++|.++++++++      
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            467899999999999999999999999999999884 4333322221     1358899999999998888774      


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                       ++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||...  ...+...|+.+|.+
T Consensus        90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  169 (256)
T 3ezl_A           90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAG  169 (256)
T ss_dssp             CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHHH
Confidence             7899999999532           2245678999977776655    5567789999999764  34456789999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      ++.+.+.       .|+++++++||.+.+++..
T Consensus       170 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  202 (256)
T 3ezl_A          170 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK  202 (256)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred             HHHHHHHHHHHHHHhCCEEEEEEECcccCcccc
Confidence            9887642       6899999999999987543

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.84  E-value=1.7e-21  Score=169.59  Aligned_cols=168  Identities=15%  Similarity=0.078  Sum_probs=113.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC---
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP---  160 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~---  160 (269)
                      |||||||||||||++|+++|+++||+|++++|++...          .+..|    +...+.++++|+|||+|+..-   
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~----------~~~~~----~~~~~~l~~~d~vihla~~~i~~~   66 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG----------RITWD----ELAASGLPSCDAAVNLAGENILNP   66 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------EEEHH----HHHHHCCCSCSEEEECCCCCSSCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC----------eeecc----hhhHhhccCCCEEEEeccCcccch
Confidence            6899999999999999999999999999999975431          12222    222445678999999998321   


Q ss_pred             ---C-----ccchhhcHHHHHHHHHHHHHcCCC--eEEEecccCCC----------C---CCCCcHHHHHHHHHHHH--H
Q 024290          161 ---E-----EPIKKVDWEGKVALIQCAKAMGIQ--KYVFYSIHNCD----------K---HPEVPLMEIKYCTEQFL--Q  215 (269)
Q Consensus       161 ---~-----~~~~~~n~~~~~~li~a~~~~~v~--r~V~~SS~~~~----------~---~~~~~y~~sK~~~e~~~--~  215 (269)
                         +     ..+.+.|+.++.+|++++++.+.+  +||+.||.++.          .   .+...|+..|...|...  .
T Consensus        67 ~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~~~~~  146 (298)
T 4b4o_A           67 LRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLP  146 (298)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHHHCCS
T ss_pred             hhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHHHHhh
Confidence               1     235668999999999999988765  47787876531          1   12233566665555443  4


Q ss_pred             hcCCCEEEEEcCcccccCccccccee---EeCCCccccccccCCCCcchhccchhc
Q 024290          216 DSGLPHVIIRLWPYWAICSTYTRREV---CLGNGCTNSNCIHGHSGYSATDIRSFT  268 (269)
Q Consensus       216 ~~gi~~~ilrp~~i~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dvrd~~  268 (269)
                      ..+++++++||+.+||+.........   ..+...   ....+..+.++.+++|++
T Consensus       147 ~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~---~~g~g~~~~~~ihv~Dva  199 (298)
T 4b4o_A          147 GDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGG---PIGSGHQFFPWIHIGDLA  199 (298)
T ss_dssp             SSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCC---CBTTSCSBCCEEEHHHHH
T ss_pred             ccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcc---eecccCceeecCcHHHHH
Confidence            57899999999999998654332221   122222   223455555666666654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.84  E-value=6.6e-21  Score=165.31  Aligned_cols=156  Identities=12%  Similarity=0.069  Sum_probs=121.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC----------------cc---ccc--cCCCEEEEcCCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP----------------AD---FLR--DWGATVVNADLSK  138 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~----------------~~---~~~--~~~~~~i~~Dl~d  138 (269)
                      .+.+|+++||||+|+||+++++.|+++|++|++++|+.+..                .+   .+.  ...+.++.+|++|
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   87 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD   87 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence            47889999999999999999999999999999999973211                01   011  1257889999999


Q ss_pred             CCcHHHHhc-------CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHH----cC-CCeEEEecccC
Q 024290          139 PETIPATLV-------GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKA----MG-IQKYVFYSIHN  194 (269)
Q Consensus       139 ~~~l~~~~~-------~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~----~~-v~r~V~~SS~~  194 (269)
                      ++++.++++       ++|+||||||...            ++..+++|+.++.++++++..    .+ .++||++||..
T Consensus        88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (286)
T 3uve_A           88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG  167 (286)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence            999888764       7999999999532            123567899998888887643    23 46999999976


Q ss_pred             CC--CCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          195 CD--KHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       195 ~~--~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      ..  ......|+.+|.+++.+.+.       .|+++++|+||++.+++..
T Consensus       168 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~  217 (286)
T 3uve_A          168 GLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLH  217 (286)
T ss_dssp             GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTS
T ss_pred             hccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccc
Confidence            53  34456799999999987643       6899999999999988643

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.84  E-value=4e-21  Score=167.57  Aligned_cols=155  Identities=16%  Similarity=0.129  Sum_probs=122.8

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC--C---ccccc--cCCCEEEEcCCCCCCcHHHHh-----
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA--P---ADFLR--DWGATVVNADLSKPETIPATL-----  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~--~---~~~~~--~~~~~~i~~Dl~d~~~l~~~~-----  146 (269)
                      ..+++|++|||||+|+||+++++.|+++|++|++++|+.+.  .   .+.++  ...+.++.+|++|.+++++++     
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999886321  1   11111  125778899999999887776     


Q ss_pred             --cCccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHHHcCC--CeEEEecccCCC--CCCCCcHHHHHH
Q 024290          147 --VGVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAKAMGI--QKYVFYSIHNCD--KHPEVPLMEIKY  208 (269)
Q Consensus       147 --~~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~~v--~r~V~~SS~~~~--~~~~~~y~~sK~  208 (269)
                        .++|+||||||...            ++..+++|+.++.++++++.....  ++||++||....  ......|+.+|.
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  204 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKA  204 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHHH
Confidence              37899999999522            134567999999999999976543  499999998653  344567999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +++.+.+.       .|+++++|+||++++++
T Consensus       205 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  236 (294)
T 3r3s_A          205 AILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence            99987643       58999999999999875

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.84  E-value=4.6e-21  Score=164.54  Aligned_cols=153  Identities=13%  Similarity=0.094  Sum_probs=121.2

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----c-CCCEEEEcCCCCCCcHHHHhc------
Q 024290           81 VRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----D-WGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        81 ~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~-~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      +++|+++||||+  |+||+++++.|+++|++|++++|+. +..+.++    . ....++++|++|++++.++++      
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            667899999999  9999999999999999999999976 2222111    1 135789999999998888774      


Q ss_pred             -CccEEEEcCCCCCC----------------ccchhhcHHHHHHHHHHHHHcC--CCeEEEecccCC--CCCCCCcHHHH
Q 024290          148 -GVHTVIDCATGRPE----------------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       148 -~~d~vi~~ag~~~~----------------~~~~~~n~~~~~~li~a~~~~~--v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                       ++|+||||||....                +..+++|+.++.++++++.+..  .++||++||...  ...+...|+.+
T Consensus        86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  165 (265)
T 1qsg_A           86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLA  165 (265)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred             CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHHHHH
Confidence             68999999995321                2355689999999999997652  259999999754  23445679999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      |.+++.+.+.       .|+++++++||++++++.
T Consensus       166 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  200 (265)
T 1qsg_A          166 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA  200 (265)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTG
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchh
Confidence            9999987743       489999999999999864

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.84  E-value=5.6e-21  Score=164.92  Aligned_cols=153  Identities=12%  Similarity=0.091  Sum_probs=121.5

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc----cc-CCCEEEEcCCCCCCcHHHHhc------
Q 024290           81 VRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----RD-WGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        81 ~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~----~~-~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      +.+|+++||||+  |+||+++++.|+++|++|++++|+.+ ..+.+    .. ..+.++.+|++|++++.++++      
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            678999999999  99999999999999999999999864 21111    11 237889999999998887764      


Q ss_pred             -CccEEEEcCCCCCC---------------ccchhhcHHHHHHHHHHHHHcC--CCeEEEecccCCC--CCCCCcHHHHH
Q 024290          148 -GVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCD--KHPEVPLMEIK  207 (269)
Q Consensus       148 -~~d~vi~~ag~~~~---------------~~~~~~n~~~~~~li~a~~~~~--v~r~V~~SS~~~~--~~~~~~y~~sK  207 (269)
                       ++|+||||||....               +..+++|+.++.++++++...-  .++||++||....  ..+...|+.+|
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  162 (275)
T 2pd4_A           83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAK  162 (275)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHHHH
Confidence             68999999995421               2345689999999999997651  2599999997542  33456799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.+.+.       .|+++++++||++.+++.
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  196 (275)
T 2pd4_A          163 AALESAVRYLAVDLGKHHIRVNALSAGPIRTLAS  196 (275)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCccccchh
Confidence            999987643       589999999999998754

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.84  E-value=4.2e-21  Score=162.83  Aligned_cols=149  Identities=15%  Similarity=0.059  Sum_probs=120.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-CCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-----CccEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALD-EGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-----GVHTVID  154 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~-~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-----~~d~vi~  154 (269)
                      .++|+++||||+|+||+++++.|++ .|+.|++++|+.+...     ..+.++.+|++|.+++.++++     ++|+|||
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~   76 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-----ENLKFIKADLTKQQDITNVLDIIKNVSFDGIFL   76 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC-----TTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc-----ccceEEecCcCCHHHHHHHHHHHHhCCCCEEEE
Confidence            3578999999999999999999999 7899999998755222     246889999999999988875     7899999


Q ss_pred             cCCCCC-----------CccchhhcHHHHHHHHHHHHHcCC--CeEEEecccCCC--CCCCCcHHHHHHHHHHHHH----
Q 024290          155 CATGRP-----------EEPIKKVDWEGKVALIQCAKAMGI--QKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ----  215 (269)
Q Consensus       155 ~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~~v--~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~----  215 (269)
                      |||...           ++..+++|+.++.++++++.....  ++||++||....  ......|+.+|.+++.+.+    
T Consensus        77 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~  156 (244)
T 4e4y_A           77 NAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLAL  156 (244)
T ss_dssp             CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHHHH
Confidence            999532           234567899999999998876522  489999997653  3344579999999998764    


Q ss_pred             ---hcCCCEEEEEcCcccccCc
Q 024290          216 ---DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ---~~gi~~~ilrp~~i~g~~~  234 (269)
                         ..|+++++++||.+.+++.
T Consensus       157 e~~~~gi~v~~v~PG~v~T~~~  178 (244)
T 4e4y_A          157 DLAKYQIRVNTVCPGTVDTDLY  178 (244)
T ss_dssp             HHGGGTCEEEEEEESCBCCHHH
T ss_pred             HHHHcCeEEEEEecCccCchhh
Confidence               3689999999999998753

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.84  E-value=4.7e-21  Score=166.45  Aligned_cols=154  Identities=16%  Similarity=0.067  Sum_probs=118.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC-CCCccc---cc---cCCCEEEEcCCCC----CCcHHHHhc-
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR-PAPADF---LR---DWGATVVNADLSK----PETIPATLV-  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~---~~---~~~~~~i~~Dl~d----~~~l~~~~~-  147 (269)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+. ++..+.   +.   ...+.++.+|++|    .+++.++++ 
T Consensus        20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~   99 (288)
T 2x9g_A           20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS   99 (288)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence            47789999999999999999999999999999999986 432221   11   1257889999999    777776653 


Q ss_pred             ------CccEEEEcCCCCCC---------------------ccchhhcHHHHHHHHHHHHHc----C------CCeEEEe
Q 024290          148 ------GVHTVIDCATGRPE---------------------EPIKKVDWEGKVALIQCAKAM----G------IQKYVFY  190 (269)
Q Consensus       148 ------~~d~vi~~ag~~~~---------------------~~~~~~n~~~~~~li~a~~~~----~------v~r~V~~  190 (269)
                            ++|+||||||....                     +..+++|+.++..+++++...    +      .++||++
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i  179 (288)
T 2x9g_A          100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL  179 (288)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence                  79999999995321                     124568888888888877543    2      4699999


Q ss_pred             cccCCC--CCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          191 SIHNCD--KHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       191 SS~~~~--~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      ||....  ......|+.+|.+++.+.+.       .|+++++|+||++++++
T Consensus       180 sS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          180 CDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV  231 (288)
T ss_dssp             CCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred             ecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence            998653  33446799999999877643       58999999999999987

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.84  E-value=5.1e-21  Score=165.35  Aligned_cols=155  Identities=10%  Similarity=0.055  Sum_probs=120.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC-------------CCccc---cc--cCCCEEEEcCCCCCCc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP-------------APADF---LR--DWGATVVNADLSKPET  141 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~-------------~~~~~---~~--~~~~~~i~~Dl~d~~~  141 (269)
                      .+.+|+++||||+|+||+++++.|+++|++|++++|+..             ...+.   +.  ...+.++.+|++|.++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            477899999999999999999999999999999998422             11111   11  1257889999999998


Q ss_pred             HHHHhc-------CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHH----HHcC-CCeEEEecccCCC--
Q 024290          142 IPATLV-------GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCA----KAMG-IQKYVFYSIHNCD--  196 (269)
Q Consensus       142 l~~~~~-------~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~----~~~~-v~r~V~~SS~~~~--  196 (269)
                      +.++++       ++|+||||||....           +..+++|+.++.++++++    ++.+ .++||++||....  
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  167 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM  167 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence            888763       69999999995322           345678999988888775    3333 4699999997653  


Q ss_pred             CCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          197 KHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       197 ~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ......|+.+|.+++.+.+.       .|++++.|+||++.+++.
T Consensus       168 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  212 (277)
T 3tsc_A          168 QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMG  212 (277)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGG
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcc
Confidence            33456799999999987653       589999999999998864

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.84  E-value=8.4e-21  Score=163.29  Aligned_cols=157  Identities=15%  Similarity=0.098  Sum_probs=121.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-ccc---cc--cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADF---LR--DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~---~~--~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+.+|+++||||+|+||++++++|+++|++|++++++.... .+.   +.  ...+.++.+|++|.++++++++      
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            36678999999999999999999999999999998544321 111   11  2358899999999998888764      


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                       ++|+||||||...           ++..+++|+.++.++++++.    +.+.++||++||...  ...+...|+.+|.+
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  181 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAG  181 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHH
Confidence             7999999999532           22356789999888877764    356679999999754  34455689999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCccc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~~~  236 (269)
                      ++.+.+.       .|+++++++||++.+++...
T Consensus       182 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  215 (269)
T 3gk3_A          182 IHGFTKTLALETAKRGITVNTVSPGYLATAMVEA  215 (269)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC
T ss_pred             HHHHHHHHHHHhhhcCCEEEEEecCcccchhhhh
Confidence            9887642       58999999999999886543

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.84  E-value=3.6e-21  Score=164.76  Aligned_cols=154  Identities=16%  Similarity=0.069  Sum_probs=118.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHh--------c
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATL--------V  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~--------~  147 (269)
                      |++|+++||||+|+||+++++.|+++|++|++++|+.+...+...     ...+.++.+|++|++++.+++        .
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            678999999999999999999999999999999997554332221     124678899999998877664        3


Q ss_pred             CccEEEEcCC--C--------CC--------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC-CCCCCcHH
Q 024290          148 GVHTVIDCAT--G--------RP--------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD-KHPEVPLM  204 (269)
Q Consensus       148 ~~d~vi~~ag--~--------~~--------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~-~~~~~~y~  204 (269)
                      ++|+||||||  .        .+        ++..+++|+.++..+.+++    ++.+.++||++||.... ..+..+|+
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~Y~  162 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPYG  162 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCCSSHHHH
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCCCCCchH
Confidence            5799999994  1        11        1244567888877665555    35567899999997653 23456799


Q ss_pred             HHHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          205 EIKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       205 ~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+|.+++.+.+.       .|+++++++||++.+++.
T Consensus       163 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  199 (260)
T 2qq5_A          163 VGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELL  199 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC
T ss_pred             HHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHH
Confidence            999999987642       689999999999998864

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.84  E-value=7.9e-21  Score=162.20  Aligned_cols=152  Identities=14%  Similarity=0.108  Sum_probs=120.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc-------CccE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV-------GVHT  151 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------~~d~  151 (269)
                      +|+++||||+|+||++++++|+++|  +.|++++|+.+...+..++  ..+.++.+|++|.++++++++       ++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            5899999999999999999999985  7898899976543332222  257889999999998888764       7899


Q ss_pred             EEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 024290          152 VIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       152 vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~  213 (269)
                      ||||||...            ++..+++|+.++.++++++    ++.+ ++||++||....  ..+...|+.+|.+++.+
T Consensus        82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  160 (254)
T 3kzv_A           82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHF  160 (254)
T ss_dssp             EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHHHHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHHHHH
Confidence            999999521            1235678999998888877    5555 799999998653  34456899999999987


Q ss_pred             HHh-----cCCCEEEEEcCcccccCcc
Q 024290          214 LQD-----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       214 ~~~-----~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+.     .+++++.++||++.+++..
T Consensus       161 ~~~la~e~~~i~vn~v~PG~v~t~~~~  187 (254)
T 3kzv_A          161 AMTLANEERQVKAIAVAPGIVDTDMQV  187 (254)
T ss_dssp             HHHHHHHCTTSEEEEEECSSCCCCCSC
T ss_pred             HHHHHhhccCcEEEEEeCCcccchhHH
Confidence            653     5899999999999988654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.84  E-value=4.9e-21  Score=164.52  Aligned_cols=157  Identities=15%  Similarity=0.085  Sum_probs=120.6

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC-CCccccc-----cCCCEEEEcCCCCCCcHHHHhc-----
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP-APADFLR-----DWGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~-~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      ..+++|+|+||||+|+||++++++|+++|++|+++.++.. ...+..+     ..++.++.+|++|.+++.++++     
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ  101 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3577899999999999999999999999999988765432 2222111     1357899999999999888774     


Q ss_pred             --CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH-----HcCCCeEEEecccCC--CCCCCCcHHHHH
Q 024290          148 --GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK-----AMGIQKYVFYSIHNC--DKHPEVPLMEIK  207 (269)
Q Consensus       148 --~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~-----~~~v~r~V~~SS~~~--~~~~~~~y~~sK  207 (269)
                        ++|+||||||...           ++..+++|+.++.++++++.     +.+.++||++||...  ...+...|+.+|
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  181 (267)
T 4iiu_A          102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAK  181 (267)
T ss_dssp             HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHH
Confidence              7999999999532           23456789999998888763     456679999999753  345567899999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+++.+.+.       .|+++++++||.+.+++..
T Consensus       182 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  216 (267)
T 4iiu_A          182 AGIIGATKALAIELAKRKITVNCIAPGLIDTGMIE  216 (267)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccc
Confidence            998877642       5899999999999988654

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.84  E-value=1.1e-20  Score=160.05  Aligned_cols=148  Identities=15%  Similarity=0.051  Sum_probs=118.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc---------CccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---------GVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~---------~~d~  151 (269)
                      .++|+++||||+|+||++++++|+++|++|++++|+.+....     ...++.+|++|++++.++++         ++|+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~   79 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   79 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC-----CcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            457899999999999999999999999999999998655332     24677899999988877764         7899


Q ss_pred             EEEcCCCCC------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH
Q 024290          152 VIDCATGRP------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       152 vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~  215 (269)
                      ||||||...            ++..+++|+.++.++++++.+.  ..++||++||...  ...+...|+.+|.+++.+.+
T Consensus        80 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  159 (241)
T 1dhr_A           80 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQ  159 (241)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHH
T ss_pred             EEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHHHHHHHHH
Confidence            999999532            1234568999999999988764  1259999999765  23445679999999998875


Q ss_pred             h---------cCCCEEEEEcCcccccC
Q 024290          216 D---------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 ~---------~gi~~~ilrp~~i~g~~  233 (269)
                      .         .|+++++|+||++.+++
T Consensus       160 ~la~e~~~~~~gi~v~~v~PG~v~T~~  186 (241)
T 1dhr_A          160 SLAGKNSGMPSGAAAIAVLPVTLDTPM  186 (241)
T ss_dssp             HHTSTTSSCCTTCEEEEEEESCEECHH
T ss_pred             HHHHHhccCCCCeEEEEEecCcccCcc
Confidence            2         46999999999998764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.84  E-value=3e-21  Score=167.22  Aligned_cols=156  Identities=13%  Similarity=0.077  Sum_probs=122.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc------------c---ccc--cCCCEEEEcCCCCCCcH
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA------------D---FLR--DWGATVVNADLSKPETI  142 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~------------~---~~~--~~~~~~i~~Dl~d~~~l  142 (269)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+.....            +   .+.  ...+.++++|++|.+++
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   86 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV   86 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence            478899999999999999999999999999999998732110            0   011  12578899999999998


Q ss_pred             HHHhc-------CccEEEEcCCCCC---------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCCC-------
Q 024290          143 PATLV-------GVHTVIDCATGRP---------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK-------  197 (269)
Q Consensus       143 ~~~~~-------~~d~vi~~ag~~~---------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~~-------  197 (269)
                      .++++       ++|+||||||...         ++..+++|+.++.++++++...  +.++||++||.....       
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  166 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG  166 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc
Confidence            87764       7999999999532         2346779999999999999765  345999999864310       


Q ss_pred             ------CCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          198 ------HPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       198 ------~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                            .+...|+.+|.+++.+.+.       .|+++++|+||++.+++..
T Consensus       167 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~  217 (287)
T 3pxx_A          167 AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLN  217 (287)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTS
T ss_pred             ccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccc
Confidence                  2234699999999987643       5999999999999998654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.84  E-value=7.7e-21  Score=165.90  Aligned_cols=156  Identities=12%  Similarity=0.079  Sum_probs=118.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c---CCCEEEEcCCCCC-CcHHHHh------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D---WGATVVNADLSKP-ETIPATL------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~---~~~~~i~~Dl~d~-~~l~~~~------  146 (269)
                      .+.+|+|+||||+|+||++++++|+++|++|++++|+.++..+...   .   ..+.++.+|++|. +.+.+++      
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999999998654322211   1   2578899999998 7776665      


Q ss_pred             -cCccEEEEcCCCCCC-----------------------------------------ccchhhcHHHHHHHHHHHH----
Q 024290          147 -VGVHTVIDCATGRPE-----------------------------------------EPIKKVDWEGKVALIQCAK----  180 (269)
Q Consensus       147 -~~~d~vi~~ag~~~~-----------------------------------------~~~~~~n~~~~~~li~a~~----  180 (269)
                       .++|+||||||....                                         +..+++|+.++..+++++.    
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence             379999999996421                                         1236789999888887764    


Q ss_pred             HcCCCeEEEecccCCCC---------------------------------------------CCCCcHHHHHHHHHHHHH
Q 024290          181 AMGIQKYVFYSIHNCDK---------------------------------------------HPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       181 ~~~v~r~V~~SS~~~~~---------------------------------------------~~~~~y~~sK~~~e~~~~  215 (269)
                      +.+.++||++||.....                                             .+...|+.+|.+++.+.+
T Consensus       169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  248 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR  248 (311)
T ss_dssp             TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHH
Confidence            34567999999975321                                             123569999999998774


Q ss_pred             h-----cCCCEEEEEcCcccccCcc
Q 024290          216 D-----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       216 ~-----~gi~~~ilrp~~i~g~~~~  235 (269)
                      .     .+++++.++||++.+++..
T Consensus       249 ~la~e~~~i~v~~v~PG~v~T~~~~  273 (311)
T 3o26_A          249 VLANKIPKFQVNCVCPGLVKTEMNY  273 (311)
T ss_dssp             HHHHHCTTSEEEEECCCSBCSGGGT
T ss_pred             HHHhhcCCceEEEecCCceecCCcC
Confidence            3     4699999999999987643

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.83  E-value=4e-21  Score=170.14  Aligned_cols=153  Identities=16%  Similarity=0.026  Sum_probs=119.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEe-CCCCCCccccc------cCCCEEEEcCCCCCC-------------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLV-RPRPAPADFLR------DWGATVVNADLSKPE-------------  140 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~-R~~~~~~~~~~------~~~~~~i~~Dl~d~~-------------  140 (269)
                      +.+|++|||||+|+||+++++.|+++|++|++++ |+.++..+...      ...+.++.+|++|.+             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            6789999999999999999999999999999999 87543322211      125788999999999             


Q ss_pred             ----cHHHHhc-------CccEEEEcCCCCCC-------------------------ccchhhcHHHHHHHHHHHH----
Q 024290          141 ----TIPATLV-------GVHTVIDCATGRPE-------------------------EPIKKVDWEGKVALIQCAK----  180 (269)
Q Consensus       141 ----~l~~~~~-------~~d~vi~~ag~~~~-------------------------~~~~~~n~~~~~~li~a~~----  180 (269)
                          ++.++++       ++|+||||||....                         +..+++|+.++.++++++.    
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                8877764       78999999994221                         1235688888888877764    


Q ss_pred             HcC------CCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          181 AMG------IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       181 ~~~------v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+      .++||++||....  ......|+.+|.+++.+.+.       .|+++++|+||++.+++
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  271 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  271 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred             hcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence            445      5799999998653  33456799999999987643       58999999999999886

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.83  E-value=3.7e-21  Score=167.50  Aligned_cols=154  Identities=16%  Similarity=0.041  Sum_probs=119.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEe-CCCCCCccc---cc---cCCCEEEEcCCCCCC------------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLV-RPRPAPADF---LR---DWGATVVNADLSKPE------------  140 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~-R~~~~~~~~---~~---~~~~~~i~~Dl~d~~------------  140 (269)
                      .+.+|+++||||+|+||+++++.|+++|++|++++ |+.+...+.   +.   ...+.++++|++|.+            
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            46789999999999999999999999999999999 875433221   11   225788999999999            


Q ss_pred             -----cHHHHhc-------CccEEEEcCCCCCC-------------------------ccchhhcHHHHHHHHHHHH---
Q 024290          141 -----TIPATLV-------GVHTVIDCATGRPE-------------------------EPIKKVDWEGKVALIQCAK---  180 (269)
Q Consensus       141 -----~l~~~~~-------~~d~vi~~ag~~~~-------------------------~~~~~~n~~~~~~li~a~~---  180 (269)
                           ++.++++       ++|+||||||....                         +..+++|+.++..+++++.   
T Consensus        86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m  165 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  165 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                 8877764       78999999994321                         1345688888888877764   


Q ss_pred             -HcC------CCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          181 -AMG------IQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       181 -~~~------v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                       +.+      .++||++||....  ......|+.+|.+++.+.+.       .|++++.|+||++.+++
T Consensus       166 ~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  234 (291)
T 1e7w_A          166 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  234 (291)
T ss_dssp             HTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred             HhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence             344      5799999998653  33456799999999887642       68999999999998876

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.83  E-value=2.5e-21  Score=167.52  Aligned_cols=159  Identities=13%  Similarity=0.044  Sum_probs=123.3

Q ss_pred             CCCCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc------C
Q 024290           77 PGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV------G  148 (269)
Q Consensus        77 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~------~  148 (269)
                      ..+.+.+|+++||||+|+||+++++.|+++|++|++++|+.++..+...+  ..+.++++|++|.+++.++++      +
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  103 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGR  103 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            33457889999999999999999999999999999999986544333222  357899999999999888774      6


Q ss_pred             ccEEEEc-CCCCC----------------CccchhhcHHHHHHHHHHHHH----------cCCCeEEEecccCCC--CCC
Q 024290          149 VHTVIDC-ATGRP----------------EEPIKKVDWEGKVALIQCAKA----------MGIQKYVFYSIHNCD--KHP  199 (269)
Q Consensus       149 ~d~vi~~-ag~~~----------------~~~~~~~n~~~~~~li~a~~~----------~~v~r~V~~SS~~~~--~~~  199 (269)
                      +|++||| ++...                ++..+++|+.++.++++++..          .+.++||++||....  ...
T Consensus       104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  183 (281)
T 3ppi_A          104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIG  183 (281)
T ss_dssp             EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTT
T ss_pred             CCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCC
Confidence            8999999 44211                134567889998888887752          234589999998653  334


Q ss_pred             CCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          200 EVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       200 ~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      ...|+.+|.+++.+.+.       .|+++++++||++.+++..
T Consensus       184 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  226 (281)
T 3ppi_A          184 QTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME  226 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhh
Confidence            56799999999887642       5899999999999887543

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.83  E-value=7.6e-20  Score=163.07  Aligned_cols=153  Identities=11%  Similarity=0.139  Sum_probs=121.4

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc----------ccc--CCCEEEEcCCCCCCcHHHHh
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----------LRD--WGATVVNADLSKPETIPATL  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----------~~~--~~~~~i~~Dl~d~~~l~~~~  146 (269)
                      ..+++|++|||||+|+||+++++.|+++|++|++++|+.++..+.          ++.  ..+.++.+|++|++++++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~  120 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV  120 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            357899999999999999999999999999999999987653221          111  24678899999999988877


Q ss_pred             c-------CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC----CCCC
Q 024290          147 V-------GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD----KHPE  200 (269)
Q Consensus       147 ~-------~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~----~~~~  200 (269)
                      +       ++|+||||||...           ++..+++|+.++.++++++.    +.+.++||++||....    ....
T Consensus       121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~  200 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQH  200 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSS
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCc
Confidence            4       7999999999422           23457899999999888874    4466799999998653    2345


Q ss_pred             CcHHHHHHHHHHHHHh------cCCCEEEEEcCc-ccc
Q 024290          201 VPLMEIKYCTEQFLQD------SGLPHVIIRLWP-YWA  231 (269)
Q Consensus       201 ~~y~~sK~~~e~~~~~------~gi~~~ilrp~~-i~g  231 (269)
                      ..|+.+|.+++.+.+.      .+++++.|.||+ +..
T Consensus       201 ~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T  238 (346)
T 3kvo_A          201 CAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT  238 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc
Confidence            5799999999887643      589999999996 444

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.83  E-value=6e-21  Score=161.82  Aligned_cols=154  Identities=16%  Similarity=0.101  Sum_probs=120.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc------cCCCEEEEcCC--CCCCcHHHHh-----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR------DWGATVVNADL--SKPETIPATL-----  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~------~~~~~~i~~Dl--~d~~~l~~~~-----  146 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.++..+...      ..+..++.+|+  +|.+++.+++     
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999998654332211      13567888887  7777777665     


Q ss_pred             --cCccEEEEcCCCC-C-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHH
Q 024290          147 --VGVHTVIDCATGR-P-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       147 --~~~d~vi~~ag~~-~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                        .++|+||||||.. .           ++..+++|+.++.++++++    ++.+.++||++||...  .......|+.+
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  170 (247)
T 3i1j_A           91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVS  170 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHH
Confidence              3789999999953 1           1235678999999888887    4455679999998764  33445679999


Q ss_pred             HHHHHHHHHh--------cCCCEEEEEcCcccccC
Q 024290          207 KYCTEQFLQD--------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       207 K~~~e~~~~~--------~gi~~~ilrp~~i~g~~  233 (269)
                      |.+++.+.+.        .+++++.++||.+.+++
T Consensus       171 K~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~  205 (247)
T 3i1j_A          171 KFATEGLMQTLADELEGVTAVRANSINPGATRTGM  205 (247)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc
Confidence            9999987642        57999999999998864

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.83  E-value=3e-20  Score=159.34  Aligned_cols=156  Identities=11%  Similarity=0.097  Sum_probs=121.8

Q ss_pred             CCCCCEEEEECCCcH--HHHHHHHHHHHCCCeEEEEeCCCCCCc---ccc---ccCCCEEEEcCCCCCCcHHHHhc----
Q 024290           80 PVRPTSILVVGATGT--LGRQIVRRALDEGYDVRCLVRPRPAPA---DFL---RDWGATVVNADLSKPETIPATLV----  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~--iG~~l~~~Ll~~G~~V~~~~R~~~~~~---~~~---~~~~~~~i~~Dl~d~~~l~~~~~----  147 (269)
                      .+++|+++||||+|+  ||+++++.|+++|++|++++|+.....   +..   ...++.++.+|++|+++++++++    
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            577899999999977  999999999999999999999743211   111   11258999999999999888774    


Q ss_pred             ---CccEEEEcCCCCC---------------CccchhhcHHHHHHHHHHHHHcC--CCeEEEecccCCC--CCCCCcHHH
Q 024290          148 ---GVHTVIDCATGRP---------------EEPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCD--KHPEVPLME  205 (269)
Q Consensus       148 ---~~d~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~~--v~r~V~~SS~~~~--~~~~~~y~~  205 (269)
                         ++|+||||||...               ++..+++|+.++.++++++....  .++||++||....  ......|+.
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  163 (266)
T 3oig_A           84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGV  163 (266)
T ss_dssp             HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHHHHH
T ss_pred             HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcchhHH
Confidence               6899999999543               12345688889999999887653  2489999997643  334567999


Q ss_pred             HHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          206 IKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       206 sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      +|.+++.+.+.       .|+++++++||++.++...
T Consensus       164 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  200 (266)
T 3oig_A          164 AKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAK  200 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccc
Confidence            99999987642       5899999999999986543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.83  E-value=9.4e-21  Score=167.69  Aligned_cols=152  Identities=13%  Similarity=0.086  Sum_probs=118.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cc--------cCCCEEEEcCCCCCCcHHHHhc----
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR--------DWGATVVNADLSKPETIPATLV----  147 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~--------~~~~~~i~~Dl~d~~~l~~~~~----  147 (269)
                      +|+|+||||+|+||++++++|+++|++|+++.|+.....+.   ++        ..++.++.+|++|.+++.++++    
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            57899999999999999999999999999888865443221   11        1357889999999999998886    


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~  209 (269)
                       ++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||....  ......|+.+|.+
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a  161 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA  161 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHH
Confidence             4899999998532           2345678999999888875    45577899999997643  3345679999999


Q ss_pred             HHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+       ..|+++++|+||.+.+++.
T Consensus       162 ~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~  193 (327)
T 1jtv_A          162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAFM  193 (327)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEeCcccChHH
Confidence            998764       2689999999999998763

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.83  E-value=8.3e-21  Score=163.38  Aligned_cols=155  Identities=17%  Similarity=0.130  Sum_probs=117.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc----ccc--CCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LRD--WGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~~~--~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++++.....+.    +..  ..+.++.+|++|+++++++++      
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35678999999999999999999999999999986654322111    111  257889999999999888764      


Q ss_pred             -CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          148 -GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       148 -~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                       ++|+||||||...           ++..+++|+.++.++++++...  ..++||++||...  .......|+.+|.+++
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  183 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVE  183 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHHHH
Confidence             7899999999532           2345569999999999888654  2258999998754  3445568999999999


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccCc
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.+.       .|++++.|+||.+.+++.
T Consensus       184 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  213 (267)
T 3u5t_A          184 AMTHVLSKELRGRDITVNAVAPGPTATDLF  213 (267)
T ss_dssp             HHHHHHHHHTTTSCCEEEEEEECCBC----
T ss_pred             HHHHHHHHHhhhhCCEEEEEEECCCcCccc
Confidence            87753       589999999999988753

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.83  E-value=7.9e-21  Score=164.64  Aligned_cols=155  Identities=15%  Similarity=0.058  Sum_probs=119.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.++..+....  ..+.++.+|++|.+++.+++       .++|
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKID   81 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            46789999999999999999999999999999999986544333222  35788999999998887776       3689


Q ss_pred             EEEEcCCCCC----------------CccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCCC--CCCCCcHHHHHHH
Q 024290          151 TVIDCATGRP----------------EEPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (269)
Q Consensus       151 ~vi~~ag~~~----------------~~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~~--~~~~~~y~~sK~~  209 (269)
                      ++|||||...                ++..+++|+.++.++++++...   ..++||++||....  ......|+.+|.+
T Consensus        82 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  161 (281)
T 3zv4_A           82 TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHA  161 (281)
T ss_dssp             EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHHHHHHH
T ss_pred             EEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhHHHHHH
Confidence            9999999521                2234568999988888877432   22699999987643  3344579999999


Q ss_pred             HHHHHHh------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+.      ..++++.|+||.+.+++.
T Consensus       162 ~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~  192 (281)
T 3zv4_A          162 VVGLVRQMAFELAPHVRVNGVAPGGMNTDLR  192 (281)
T ss_dssp             HHHHHHHHHHHHTTTSEEEEEEECSSCC--C
T ss_pred             HHHHHHHHHHHhcCCCEEEEEECCcCcCCcc
Confidence            9987643      249999999999988754

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.83  E-value=7.8e-21  Score=164.84  Aligned_cols=154  Identities=14%  Similarity=0.120  Sum_probs=119.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc------CCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD------WGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~------~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+.+|+|+||||+|+||+++++.|+++|++|++++|+.++..+....      ..+.++.+|++|.+++.++++      
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999986543322111      246789999999988877764      


Q ss_pred             -CccEEEEc-CCCCC----------CccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCCC--CCCCCcHHHHHHHH
Q 024290          148 -GVHTVIDC-ATGRP----------EEPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNCD--KHPEVPLMEIKYCT  210 (269)
Q Consensus       148 -~~d~vi~~-ag~~~----------~~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~~--~~~~~~y~~sK~~~  210 (269)
                       ++|+|||| +|...          ++..+++|+.++.++++++...   +.++||++||....  ..+...|+.+|.++
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  184 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFAL  184 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHHHHHH
Confidence             79999999 56321          1235678999988888877432   34799999997652  34456799999999


Q ss_pred             HHHHH---------hcCCCEEEEEcCcccccC
Q 024290          211 EQFLQ---------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~---------~~gi~~~ilrp~~i~g~~  233 (269)
                      +.+++         ..++++++++||++.+++
T Consensus       185 ~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~  216 (286)
T 1xu9_A          185 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTET  216 (286)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH
T ss_pred             HHHHHHHHHHHhhcCCCeEEEEeecCccCChh
Confidence            87653         258999999999998864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.83  E-value=4.6e-21  Score=164.45  Aligned_cols=156  Identities=12%  Similarity=0.038  Sum_probs=117.8

Q ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC---Ccc---cccc--CCCEEEEcCCCCCCcHHHHhc--
Q 024290           78 GTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA---PAD---FLRD--WGATVVNADLSKPETIPATLV--  147 (269)
Q Consensus        78 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~---~~~---~~~~--~~~~~i~~Dl~d~~~l~~~~~--  147 (269)
                      .+.+++|+++||||+|+||+++++.|+++|++|++++|....   ..+   .+..  ..+.++.+|++|.+++.++++  
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            345788999999999999999999999999999999885322   111   1111  247788999999999888774  


Q ss_pred             -----CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHH
Q 024290          148 -----GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIK  207 (269)
Q Consensus       148 -----~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK  207 (269)
                           ++|+||||||...           ++..+++|+.++.++++++...  +.++||++||...  .......|+.+|
T Consensus        86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~asK  165 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNK  165 (262)
T ss_dssp             HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-----
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHHH
Confidence                 7899999999432           2345668999999999999764  3468999998753  234456899999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .+++.+.+.       .|++++.++||.+.+++
T Consensus       166 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  198 (262)
T 3ksu_A          166 APVEHYTRAASKELMKQQISVNAIAPGPMDTSF  198 (262)
T ss_dssp             CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHH
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence            999987653       58999999999998865

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.83  E-value=8.6e-21  Score=163.42  Aligned_cols=154  Identities=17%  Similarity=0.140  Sum_probs=114.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-eCCCCCCccc---ccc--CCCEEEEcCCCCCCcHHHHhc-------C
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADF---LRD--WGATVVNADLSKPETIPATLV-------G  148 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~~~~-------~  148 (269)
                      .+|+|+||||+|+||++++++|+++|++|+++ .|+.+...+.   +..  ..+.++.+|++|.+++.++++       +
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            46889999999999999999999999999887 4443322221   111  247889999999998887764       7


Q ss_pred             ccEEEEcCCCCCC------------ccchhhcHHHHHHHHHHHHHc-------CCCeEEEecccCC--CCC-CCCcHHHH
Q 024290          149 VHTVIDCATGRPE------------EPIKKVDWEGKVALIQCAKAM-------GIQKYVFYSIHNC--DKH-PEVPLMEI  206 (269)
Q Consensus       149 ~d~vi~~ag~~~~------------~~~~~~n~~~~~~li~a~~~~-------~v~r~V~~SS~~~--~~~-~~~~y~~s  206 (269)
                      +|+||||||....            +..+++|+.++.++++++...       +.++||++||...  ... ....|+.+
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  184 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAAS  184 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHH
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHH
Confidence            8999999995321            245678999999888887543       3458999999754  222 34569999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      |.+++.+++.       .|+++++++||++++++..
T Consensus       185 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  220 (272)
T 4e3z_A          185 KAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHA  220 (272)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccc
Confidence            9999987642       5899999999999998643

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.83  E-value=1.5e-20  Score=165.75  Aligned_cols=155  Identities=12%  Similarity=0.076  Sum_probs=120.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC------------cc---ccc--cCCCEEEEcCCCCCCcH
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP------------AD---FLR--DWGATVVNADLSKPETI  142 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~------------~~---~~~--~~~~~~i~~Dl~d~~~l  142 (269)
                      .+.+|++|||||+|+||+++++.|+++|++|++++|+....            .+   .+.  ...+.++.+|++|++++
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            47789999999999999999999999999999998863211            00   011  12578899999999998


Q ss_pred             HHHhc-------CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcC-CCeEEEecccCCC--C
Q 024290          143 PATLV-------GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMG-IQKYVFYSIHNCD--K  197 (269)
Q Consensus       143 ~~~~~-------~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~-v~r~V~~SS~~~~--~  197 (269)
                      .++++       ++|+||||||...           ++..+++|+.++.++++++.    +.+ .++||++||....  .
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~  202 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA  202 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC
Confidence            88764       7999999999532           23456789999988888774    333 4689999997653  3


Q ss_pred             CCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          198 HPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       198 ~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .....|+.+|.+++.+.+.       .|+++++|+||++++++.
T Consensus       203 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  246 (317)
T 3oec_A          203 PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMA  246 (317)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccc
Confidence            3456799999999987643       589999999999998753

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.83  E-value=2.6e-20  Score=158.72  Aligned_cols=148  Identities=16%  Similarity=0.141  Sum_probs=117.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-------CccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-------GVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~~d~v  152 (269)
                      ..++|+|+||||+|+||+++++.|+++|++|++++|+.++..       ...+.+|++|.+++.++++       ++|+|
T Consensus        19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~l   91 (251)
T 3orf_A           19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTF   91 (251)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEE
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEE
Confidence            355789999999999999999999999999999999866533       2467899999998887763       57999


Q ss_pred             EEcCCCCC------------CccchhhcHHHHHHHHHHHHHcC--CCeEEEecccCC--CCCCCCcHHHHHHHHHHHHHh
Q 024290          153 IDCATGRP------------EEPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       153 i~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~~--v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~~  216 (269)
                      |||||...            ++..+++|+.++.++++++....  .++||++||...  +......|+.+|.+++.+.+.
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~  171 (251)
T 3orf_A           92 VCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKD  171 (251)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             EECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHHHHHHHH
Confidence            99999421            12456689999999999987642  248999999764  334456799999999988742


Q ss_pred             ---------cCCCEEEEEcCcccccCc
Q 024290          217 ---------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 ---------~gi~~~ilrp~~i~g~~~  234 (269)
                               .++++++++||++.+++.
T Consensus       172 la~e~~~~~~gi~v~~v~PG~v~t~~~  198 (251)
T 3orf_A          172 LASENGGLPAGSTSLGILPVTLDTPTN  198 (251)
T ss_dssp             HTSTTSSSCTTCEEEEEEESCBCCHHH
T ss_pred             HHHHhcccCCCcEEEEEecCcCcCcch
Confidence                     579999999999988753

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.83  E-value=2.2e-20  Score=159.97  Aligned_cols=156  Identities=16%  Similarity=0.133  Sum_probs=119.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Ccc---cccc--CCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PAD---FLRD--WGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~---~~~~--~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++++... ..+   .+..  ..+.++.+|++|.++++++++      
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4778999999999999999999999999999998554332 111   1111  257899999999999888774      


Q ss_pred             -CccEEEEcCCCC-C-----------CccchhhcHHHHHHHHHHHHHcCC--CeEEEecccCC---CCCCCCcHHHHHHH
Q 024290          148 -GVHTVIDCATGR-P-----------EEPIKKVDWEGKVALIQCAKAMGI--QKYVFYSIHNC---DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 -~~d~vi~~ag~~-~-----------~~~~~~~n~~~~~~li~a~~~~~v--~r~V~~SS~~~---~~~~~~~y~~sK~~  209 (269)
                       ++|+||||||.. .           ++..+++|+.++.++++++.....  ++||++||...   .......|+.+|.+
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa  164 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGA  164 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHHHH
Confidence             789999999843 1           134567999999999999976532  48999999753   34455679999999


Q ss_pred             HHHHHHh------cCCCEEEEEcCcccccCcc
Q 024290          210 TEQFLQD------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       210 ~e~~~~~------~gi~~~ilrp~~i~g~~~~  235 (269)
                      ++.+.+.      .+++++.++||.+.+++..
T Consensus       165 ~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~  196 (259)
T 3edm_A          165 VMTFTRGLAKEVGPKIRVNAVCPGMISTTFHD  196 (259)
T ss_dssp             HHHHHHHHHHHHTTTCEEEEEEECCBCC----
T ss_pred             HHHHHHHHHHHHCCCCEEEEEEECCCcCcccc
Confidence            9987643      2499999999999987643

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.82  E-value=1.1e-20  Score=166.71  Aligned_cols=153  Identities=15%  Similarity=0.056  Sum_probs=118.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC----------CCCCccc---ccc--CCCEEEEcCCCCCCcHHH
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP----------RPAPADF---LRD--WGATVVNADLSKPETIPA  144 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~----------~~~~~~~---~~~--~~~~~i~~Dl~d~~~l~~  144 (269)
                      .+.+|++|||||+|+||+++++.|+++|++|++++|+          .+...+.   +..  ..+.++.+|++|.+++.+
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            4778999999999999999999999999999999986          2211111   111  236788999999999888


Q ss_pred             Hhc-------CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHcC----------CCeEEEecccCC-
Q 024290          145 TLV-------GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAMG----------IQKYVFYSIHNC-  195 (269)
Q Consensus       145 ~~~-------~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~~----------v~r~V~~SS~~~-  195 (269)
                      +++       ++|+||||||...           ++..+++|+.++.++++++....          -++||++||... 
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  183 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL  183 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence            774       7999999999532           23456789999998888774321          149999999754 


Q ss_pred             -CCCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          196 -DKHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       196 -~~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                       .......|+.+|.+++.+.+.       .|+++++|+|| +.+++
T Consensus       184 ~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~  228 (322)
T 3qlj_A          184 QGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRM  228 (322)
T ss_dssp             HCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCC
T ss_pred             cCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCcc
Confidence             344556899999999987643       68999999999 66654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.82  E-value=3.9e-20  Score=161.29  Aligned_cols=155  Identities=9%  Similarity=0.004  Sum_probs=120.3

Q ss_pred             CCCCCEEEEECCCcH--HHHHHHHHHHHCCCeEEEEeCCCCCC---ccccc-cCCCEEEEcCCCCCCcHHHHhc------
Q 024290           80 PVRPTSILVVGATGT--LGRQIVRRALDEGYDVRCLVRPRPAP---ADFLR-DWGATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~--iG~~l~~~Ll~~G~~V~~~~R~~~~~---~~~~~-~~~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      .+++|+++||||+|+  ||+++++.|+++|++|++++|+....   .+... ...+.++.+|++|.++++++++      
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            478899999999977  99999999999999999999974211   11111 1257889999999999888764      


Q ss_pred             -CccEEEEcCCCCC---------------CccchhhcHHHHHHHHHHHHHcC--CCeEEEecccCC--CCCCCCcHHHHH
Q 024290          148 -GVHTVIDCATGRP---------------EEPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNC--DKHPEVPLMEIK  207 (269)
Q Consensus       148 -~~d~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~~--v~r~V~~SS~~~--~~~~~~~y~~sK  207 (269)
                       ++|+||||||...               ++..+++|+.++.++++++...-  .++||++||...  .......|+.+|
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asK  187 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAK  187 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHHHH
Confidence             7899999999542               12356789999999999887642  359999999764  334557899999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+++.+.+.       .|+++++|+||++.+++.
T Consensus       188 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  221 (293)
T 3grk_A          188 AALEASVKYLAVDLGPQNIRVNAISAGPIKTLAA  221 (293)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---
T ss_pred             HHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhh
Confidence            999987643       689999999999998753

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.82  E-value=1e-19  Score=157.46  Aligned_cols=156  Identities=13%  Similarity=0.116  Sum_probs=121.5

Q ss_pred             CCCCCEEEEECCCcH--HHHHHHHHHHHCCCeEEEEeCCC--CCCccccc-cCCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGATGT--LGRQIVRRALDEGYDVRCLVRPR--PAPADFLR-DWGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~--iG~~l~~~Ll~~G~~V~~~~R~~--~~~~~~~~-~~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+++||||+|+  ||+++++.|+++|++|++++|+.  +...+... ...+.++.+|++|.+++.++++       
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            477899999999955  99999999999999999999976  11111111 1258899999999998888763       


Q ss_pred             CccEEEEcCCCCCC----------------ccchhhcHHHHHHHHHHHHHc---CCCeEEEecccCC--CCCCCCcHHHH
Q 024290          148 GVHTVIDCATGRPE----------------EPIKKVDWEGKVALIQCAKAM---GIQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       148 ~~d~vi~~ag~~~~----------------~~~~~~n~~~~~~li~a~~~~---~v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                      ++|+||||||....                +..+++|+.++.++++++...   ..++||++||...  .......|+.+
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  182 (280)
T 3nrc_A          103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVA  182 (280)
T ss_dssp             SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHHHHH
T ss_pred             CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhhHHH
Confidence            68999999995431                124568889999998888653   3469999999764  33445679999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      |.+++.+.+.       .|+++++++||.+.+++..
T Consensus       183 Kaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  218 (280)
T 3nrc_A          183 KASLEATVRYTALALGEDGIKVNAVSAGPIKTLAAS  218 (280)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGG
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhh
Confidence            9999987642       6899999999999987644

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.82  E-value=3.2e-20  Score=159.63  Aligned_cols=154  Identities=12%  Similarity=0.042  Sum_probs=120.7

Q ss_pred             CCCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEeCCCCCC-cccccc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           80 PVRPTSILVVGA--TGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFLRD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        80 ~~~~~~vlVtGa--tG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~~~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      .+++|+++||||  +|+||+++++.|+++|++|++++|+.++. .+..+.  ..+.++.+|++|+++++++++       
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            367899999999  99999999999999999999999976432 222121  257889999999998888774       


Q ss_pred             ---CccEEEEcCCCCC----------------CccchhhcHHHHHHHHHHHHHcC--CCeEEEecccCCCC-CCCCcHHH
Q 024290          148 ---GVHTVIDCATGRP----------------EEPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNCDK-HPEVPLME  205 (269)
Q Consensus       148 ---~~d~vi~~ag~~~----------------~~~~~~~n~~~~~~li~a~~~~~--v~r~V~~SS~~~~~-~~~~~y~~  205 (269)
                         ++|+||||||...                ++..+++|+.++.++++++...-  .++||++||..... .....|+.
T Consensus        84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~Y~a  163 (269)
T 2h7i_A           84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTV  163 (269)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHHHHH
T ss_pred             CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccCchHHHHH
Confidence               7999999999543                11245688999999999986541  25899999876532 33457999


Q ss_pred             HHHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          206 IKYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       206 sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +|.+++.+.+.       .|+++++|+||++.+++
T Consensus       164 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  198 (269)
T 2h7i_A          164 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLA  198 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHH
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCcccchh
Confidence            99999877642       58999999999998764

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.81  E-value=9.8e-21  Score=160.57  Aligned_cols=154  Identities=16%  Similarity=0.082  Sum_probs=104.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCC---cHHHH---hcCccEEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE---TIPAT---LVGVHTVI  153 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~---~l~~~---~~~~d~vi  153 (269)
                      .+++|+++||||+|+||+++++.|++ |+.|++++|+.+...+..+..++.++.+|+++.+   .+.+.   +.++|+||
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv   80 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLV   80 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEE
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEE
Confidence            36789999999999999999999987 9999999998655444333346888999998762   22222   34789999


Q ss_pred             EcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh
Q 024290          154 DCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       154 ~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~  216 (269)
                      ||||...           ++..+++|+.++.++++++    ++.+ ++||++||....  ......|+.+|.+++.+.+.
T Consensus        81 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~  159 (245)
T 3e9n_A           81 HAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLADA  159 (245)
T ss_dssp             ECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHHHHHHH
Confidence            9999532           2345678998977777766    3444 799999997653  33456799999999987643


Q ss_pred             -------cCCCEEEEEcCcccccCcc
Q 024290          217 -------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       217 -------~gi~~~ilrp~~i~g~~~~  235 (269)
                             .|+++++++||.+.+++..
T Consensus       160 la~e~~~~gi~v~~v~PG~v~t~~~~  185 (245)
T 3e9n_A          160 FRKEEANNGIRVSTVSPGPTNTPMLQ  185 (245)
T ss_dssp             HHHHHGGGTCEEEEEEECCC------
T ss_pred             HHHHhhhcCeEEEEEecCCccCchhh
Confidence                   6899999999999987543

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.81  E-value=1.3e-19  Score=154.66  Aligned_cols=148  Identities=8%  Similarity=-0.038  Sum_probs=109.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc--cccCCCEEEEcCCCCCCcHHHHh-------cCccEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF--LRDWGATVVNADLSKPETIPATL-------VGVHTVI  153 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~--~~~~~~~~i~~Dl~d~~~l~~~~-------~~~d~vi  153 (269)
                      ||+++||||+|+||+++++.|+++|++|++++|+.++..+.  +...+.++...   |.+++.+++       .++|+||
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~---d~~~v~~~~~~~~~~~g~iD~lv   77 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM---SEQEPAELIEAVTSAYGQVDVLV   77 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC---CCCSHHHHHHHHHHHHSCCCEEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE---CHHHHHHHHHHHHHHhCCCCEEE
Confidence            47899999999999999999999999999999986553322  11112122222   566666554       3799999


Q ss_pred             EcCCCC-C-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 024290          154 DCATGR-P-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       154 ~~ag~~-~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~  215 (269)
                      ||||.. .           ++..+++|+.++.++++++.    +.+.++||++||....  ......|+.+|.+++.+.+
T Consensus        78 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  157 (254)
T 1zmt_A           78 SNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLAN  157 (254)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHHHH
Confidence            999964 2           12356688888888777763    4567899999998653  3345679999999998764


Q ss_pred             h-------cCCCEEEEEcCcccccC
Q 024290          216 D-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .       .|+++++|+||+++|+.
T Consensus       158 ~la~e~~~~gi~v~~v~PG~v~~~~  182 (254)
T 1zmt_A          158 ALSKELGEYNIPVFAIGPNYLHSED  182 (254)
T ss_dssp             HHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred             HHHHHhhhcCcEEEEEecCcccccc
Confidence            3       58999999999996653

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.81  E-value=1.7e-19  Score=154.22  Aligned_cols=157  Identities=10%  Similarity=0.030  Sum_probs=119.2

Q ss_pred             CCCCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cc---cCCCEEEEcCCCCCCcHHHHh----
Q 024290           79 TPVRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR---DWGATVVNADLSKPETIPATL----  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG--~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~---~~~~~~i~~Dl~d~~~l~~~~----  146 (269)
                      +++++|+++||||+|  +||+++++.|+++|++|++.+|+.+...+.   ++   ..++.++++|++|++++.+++    
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            358899999999876  899999999999999999999986543221   22   235889999999999887776    


Q ss_pred             ---cCccEEEEcCCCCCC---------------ccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHH
Q 024290          147 ---VGVHTVIDCATGRPE---------------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLM  204 (269)
Q Consensus       147 ---~~~d~vi~~ag~~~~---------------~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~  204 (269)
                         .++|++|||||....               ...+++|+.+...+.+++...  +-++||++||....  ......|+
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~  161 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMG  161 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHH
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhH
Confidence               479999999994321               112346666666666666543  23589999998653  33456799


Q ss_pred             HHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          205 EIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       205 ~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+|.+++.+.+.       .||+++.|.||++.+++..
T Consensus       162 asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~  199 (256)
T 4fs3_A          162 VAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAK  199 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhh
Confidence            999999887643       7999999999999887543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.81  E-value=7e-20  Score=157.11  Aligned_cols=157  Identities=14%  Similarity=0.074  Sum_probs=118.9

Q ss_pred             CCCCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCCCCCc---cccc-cCCCEEEEcCCCCCCcHHHHhc-----
Q 024290           79 TPVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAPA---DFLR-DWGATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        79 ~~~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~---~~~~-~~~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      ..+.+|+|+||||+  |+||+++++.|+++|++|++++|+.....   +... ...+.++.+|++|.+++.++++     
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            35788999999999  99999999999999999999999742211   1111 1247899999999999888774     


Q ss_pred             --CccEEEEcCCCCCC----------------ccchhhcHHHHHHHHHHHHHcC--CCeEEEecccCC--CCCCCCcHHH
Q 024290          148 --GVHTVIDCATGRPE----------------EPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNC--DKHPEVPLME  205 (269)
Q Consensus       148 --~~d~vi~~ag~~~~----------------~~~~~~n~~~~~~li~a~~~~~--v~r~V~~SS~~~--~~~~~~~y~~  205 (269)
                        ++|+||||||....                +..+++|+.++.++++++...-  .++||++||...  .......|+.
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  169 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGL  169 (271)
T ss_dssp             CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHH
T ss_pred             cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccchhH
Confidence              68999999995321                2345688889999999886642  348999998764  3345578999


Q ss_pred             HHHHHHHHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          206 IKYCTEQFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       206 sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +|.+++.+.+       ..|+++++++||++.+++..
T Consensus       170 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  206 (271)
T 3ek2_A          170 AKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAAS  206 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----C
T ss_pred             HHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhh
Confidence            9999998764       36899999999999987543

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.81  E-value=3.2e-20  Score=155.28  Aligned_cols=141  Identities=13%  Similarity=0.008  Sum_probs=114.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc---CccEEEEcC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV---GVHTVIDCA  156 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~---~~d~vi~~a  156 (269)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+               +|++|+++++++++   ++|++||||
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------~D~~~~~~v~~~~~~~g~id~lv~nA   67 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------LDISDEKSVYHYFETIGAFDHLIVTA   67 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------CCTTCHHHHHHHHHHHCSEEEEEECC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------cCCCCHHHHHHHHHHhCCCCEEEECC
Confidence            367889999999999999999999999999999999743               79999999888874   789999999


Q ss_pred             CCC-C-----------CccchhhcHHHHHHHHHHHHHcC--CCeEEEecccCC--CCCCCCcHHHHHHHHHHHHHh----
Q 024290          157 TGR-P-----------EEPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQD----  216 (269)
Q Consensus       157 g~~-~-----------~~~~~~~n~~~~~~li~a~~~~~--v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~~----  216 (269)
                      |.. .           ++..+++|+.++.++++++.+.-  .++||++||...  ...+...|+.+|.+++.+.+.    
T Consensus        68 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e  147 (223)
T 3uce_A           68 GSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKE  147 (223)
T ss_dssp             CCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            953 1           12346789999999999987652  248999999764  334456799999999987643    


Q ss_pred             -cCCCEEEEEcCcccccCcc
Q 024290          217 -SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       217 -~gi~~~ilrp~~i~g~~~~  235 (269)
                       ..++++.++||++.+++..
T Consensus       148 ~~~i~vn~v~PG~v~t~~~~  167 (223)
T 3uce_A          148 LAPIRVNAISPGLTKTEAYK  167 (223)
T ss_dssp             HTTSEEEEEEECSBCSGGGT
T ss_pred             hcCcEEEEEEeCCCcchhhh
Confidence             2399999999999988643

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.80  E-value=6.9e-20  Score=155.88  Aligned_cols=155  Identities=16%  Similarity=0.110  Sum_probs=119.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC-CCCCcccc---cc--CCCEEEEcCCCCCCcHHHHhc-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP-RPAPADFL---RD--WGATVVNADLSKPETIPATLV-------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~~-------  147 (269)
                      +++|+++||||+|+||++++++|+++|++|+++.++ .+...+..   ..  ..+.++.+|++|.++++++++       
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            678999999999999999999999999999987544 33222211   11  246788999999988877763       


Q ss_pred             ------CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCC--CCCCCcHHHH
Q 024290          148 ------GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCD--KHPEVPLMEI  206 (269)
Q Consensus       148 ------~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~--~~~~~~y~~s  206 (269)
                            ++|+||||||....           +..+++|+.++.++++++...  +.++||++||....  ......|+.+
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as  164 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMT  164 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhHHh
Confidence                  28999999995322           234568999999999998764  33589999997653  3344679999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      |.+++.+.+.       .|++++.++||++.+++..
T Consensus       165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  200 (255)
T 3icc_A          165 KGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNA  200 (255)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSST
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchh
Confidence            9999987642       6899999999999988644

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.80  E-value=2.3e-19  Score=165.35  Aligned_cols=157  Identities=13%  Similarity=0.086  Sum_probs=123.5

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC--CccccccCCCEEEEcCCCCCCcHHHHhc-------C-
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA--PADFLRDWGATVVNADLSKPETIPATLV-------G-  148 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-------~-  148 (269)
                      ..+.+|+++||||+|+||+++++.|+++|++|++++|+...  ..+.....++.++.+|++|.+++.++++       + 
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~  288 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGK  288 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTC
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCC
Confidence            34678999999999999999999999999999999986321  1222233467899999999999988763       4 


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc----CCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM----GIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~----~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      +|+||||||...           ++..+++|+.++.++.+++...    +.++||++||...  .......|+.+|.+++
T Consensus       289 id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~  368 (454)
T 3u0b_A          289 VDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMI  368 (454)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             ceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHH
Confidence            999999999533           2245678999999999998775    5679999999754  4445678999999888


Q ss_pred             HHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          212 QFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       212 ~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+.+       ..|+++++|.||++.+++..
T Consensus       369 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  399 (454)
T 3u0b_A          369 GLAEALAPVLADKGITINAVAPGFIETKMTE  399 (454)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEEECSBCC----
T ss_pred             HHHHHHHHHhhhcCcEEEEEEcCcccChhhh
Confidence            7664       36999999999999887643

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.79  E-value=1.6e-19  Score=153.14  Aligned_cols=147  Identities=14%  Similarity=0.051  Sum_probs=109.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-e--CCCCCCccccccC-CCEEEEcCCCCCCcHHHHh-------cCccE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCL-V--RPRPAPADFLRDW-GATVVNADLSKPETIPATL-------VGVHT  151 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~-~--R~~~~~~~~~~~~-~~~~i~~Dl~d~~~l~~~~-------~~~d~  151 (269)
                      +|+++||||+|+||+++++.|+++|++|+++ +  |+.++..+...+. +.     |+.|.+++.+++       .++|+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~g~iD~   75 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-----IALAEQKPERLVDATLQHGEAIDT   75 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-----EECCCCCGGGHHHHHGGGSSCEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-----cccCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999999999999999999 6  8755433322221 22     223555555444       36899


Q ss_pred             EEEcCCCCCC--------------ccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          152 VIDCATGRPE--------------EPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       152 vi~~ag~~~~--------------~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      ||||||....              +..+++|+.++.++++++.    +.+.++||++||...  .......|+.+|.+++
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  155 (244)
T 1zmo_A           76 IVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATV  155 (244)
T ss_dssp             EEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHH
T ss_pred             EEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHH
Confidence            9999995322              2356688889888777764    556689999999764  3345578999999999


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccCc
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .+.+.       .|+++++|+||++.+++.
T Consensus       156 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  185 (244)
T 1zmo_A          156 ALVESAAKTLSRDGILLYAIGPNFFNNPTY  185 (244)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred             HHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence            87643       589999999999988764

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.79  E-value=3e-19  Score=153.11  Aligned_cols=157  Identities=13%  Similarity=0.091  Sum_probs=122.5

Q ss_pred             CCCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCCCCC-ccccc------cCCCEEEEcCCCCCCcHHHHhc---
Q 024290           80 PVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAP-ADFLR------DWGATVVNADLSKPETIPATLV---  147 (269)
Q Consensus        80 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~~~------~~~~~~i~~Dl~d~~~l~~~~~---  147 (269)
                      .+++|+++||||+  |+||++++++|+++|++|++++|+.+.. .+..+      ...+.++++|++|.++++++++   
T Consensus        17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (267)
T 3gdg_A           17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV   96 (267)
T ss_dssp             CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence            4788999999999  8999999999999999999999976543 22111      2357788999999998887763   


Q ss_pred             ----CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCCC----CCCCcHH
Q 024290          148 ----GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCDK----HPEVPLM  204 (269)
Q Consensus       148 ----~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~~----~~~~~y~  204 (269)
                          ++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||.....    .+...|+
T Consensus        97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~  176 (267)
T 3gdg_A           97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYN  176 (267)
T ss_dssp             HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHH
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcch
Confidence                6899999999532           1335678999988888877    555678999999975422    2456799


Q ss_pred             HHHHHHHHHHHh------cCCCEEEEEcCcccccCccc
Q 024290          205 EIKYCTEQFLQD------SGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       205 ~sK~~~e~~~~~------~gi~~~ilrp~~i~g~~~~~  236 (269)
                      .+|.+++.+.+.      ..++++.+.||++.+++...
T Consensus       177 ~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~  214 (267)
T 3gdg_A          177 VAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDF  214 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGG
T ss_pred             HHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhh
Confidence            999999987753      23899999999998876543

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.78  E-value=2.9e-19  Score=152.66  Aligned_cols=154  Identities=13%  Similarity=0.043  Sum_probs=119.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHH---CCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHhc--
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALD---EGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATLV--  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~---~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~~--  147 (269)
                      ++++|+++||||+|+||+++++.|++   +|++|++++|+.+...+...       ...+.++.+|++|++++.++++  
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            46789999999999999999999999   89999999997654332221       1247788999999988877652  


Q ss_pred             -------Ccc--EEEEcCCCCCC--------------ccchhhcHHHHHHHHHHHHHc------CCCeEEEecccCCC--
Q 024290          148 -------GVH--TVIDCATGRPE--------------EPIKKVDWEGKVALIQCAKAM------GIQKYVFYSIHNCD--  196 (269)
Q Consensus       148 -------~~d--~vi~~ag~~~~--------------~~~~~~n~~~~~~li~a~~~~------~v~r~V~~SS~~~~--  196 (269)
                             ++|  +||||||....              +..+++|+.++.++++++...      +.++||++||....  
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence                   468  99999995211              124568999999999988654      23579999997653  


Q ss_pred             CCCCCcHHHHHHHHHHHHHh-----cCCCEEEEEcCcccccC
Q 024290          197 KHPEVPLMEIKYCTEQFLQD-----SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       197 ~~~~~~y~~sK~~~e~~~~~-----~gi~~~ilrp~~i~g~~  233 (269)
                      ..+...|+.+|.+++.+.+.     .+++++.++||++.+++
T Consensus       163 ~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~  204 (259)
T 1oaa_A          163 YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM  204 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch
Confidence            33456799999999987753     35899999999998765

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.78  E-value=3.6e-19  Score=157.04  Aligned_cols=150  Identities=16%  Similarity=0.098  Sum_probs=112.9

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC---------CCCCcc---ccccCCCEEEEcCCCCCCcHHHHh
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP---------RPAPAD---FLRDWGATVVNADLSKPETIPATL  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~---------~~~~~~---~~~~~~~~~i~~Dl~d~~~l~~~~  146 (269)
                      +.+.+|+++||||+|+||+++++.|+++|++|+++++.         .++..+   .+...+. ...+|+.|.+++.+++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~   83 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLV   83 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHH
Confidence            35778999999999999999999999999999998653         221111   1112222 3458999998876664


Q ss_pred             -------cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCc
Q 024290          147 -------VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVP  202 (269)
Q Consensus       147 -------~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~  202 (269)
                             .++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||...  ...+...
T Consensus        84 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~  163 (319)
T 1gz6_A           84 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQAN  163 (319)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHH
Confidence                   47999999999532           2245678999988877776    4556789999999643  3445668


Q ss_pred             HHHHHHHHHHHHHh-------cCCCEEEEEcCcc
Q 024290          203 LMEIKYCTEQFLQD-------SGLPHVIIRLWPY  229 (269)
Q Consensus       203 y~~sK~~~e~~~~~-------~gi~~~ilrp~~i  229 (269)
                      |+.+|.+++.+.+.       .|+++++|+||.+
T Consensus       164 Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~  197 (319)
T 1gz6_A          164 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  197 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence            99999999887643       5899999999987

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.77  E-value=1.4e-18  Score=161.39  Aligned_cols=152  Identities=19%  Similarity=0.266  Sum_probs=120.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCCCCC---cc---ccccC--CCEEEEcCCCCCCcHHHHhcC---
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAP---AD---FLRDW--GATVVNADLSKPETIPATLVG---  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~-V~~~~R~~~~~---~~---~~~~~--~~~~i~~Dl~d~~~l~~~~~~---  148 (269)
                      ..++++|||||+|+||.+++++|+++|++ |++++|+.+..   .+   .++..  .+.++.+|++|.+++.++++.   
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            34689999999999999999999999985 99999975421   11   12222  467899999999999988865   


Q ss_pred             ---ccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          149 ---VHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       149 ---~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                         +|+||||||....           +..+++|+.++.++.+++++.+.++||++||...  .......|+.+|..++.
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~~  383 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDG  383 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHH
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHHHHHHHHHHHH
Confidence               4999999995332           2345679999999999999888899999999643  34456789999999987


Q ss_pred             HH---HhcCCCEEEEEcCccccc
Q 024290          213 FL---QDSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       213 ~~---~~~gi~~~ilrp~~i~g~  232 (269)
                      +.   +..|+++++|+||.+++.
T Consensus       384 la~~~~~~gi~v~~i~pG~~~~~  406 (486)
T 2fr1_A          384 LAQQRRSDGLPATAVAWGTWAGS  406 (486)
T ss_dssp             HHHHHHHTTCCCEEEEECCBC--
T ss_pred             HHHHHHhcCCeEEEEECCeeCCC
Confidence            65   457999999999999875

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.75  E-value=2.3e-18  Score=160.83  Aligned_cols=149  Identities=19%  Similarity=0.300  Sum_probs=119.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCC---cc---ccccC--CCEEEEcCCCCCCcHHHHhcC--cc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAP---AD---FLRDW--GATVVNADLSKPETIPATLVG--VH  150 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~---~~---~~~~~--~~~~i~~Dl~d~~~l~~~~~~--~d  150 (269)
                      .+++||||||+|+||.+++++|+++|+ +|++++|+....   .+   .+...  .+.++.+|++|.+++.+++++  +|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            468999999999999999999999998 588899975321   11   12222  377889999999999999864  99


Q ss_pred             EEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHHc-CCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH-
Q 024290          151 TVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ-  215 (269)
Q Consensus       151 ~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~-  215 (269)
                      +||||||....           +..+++|+.++.++.+++... +.++||++||...  .......|+.+|..++.+.+ 
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~la~~  417 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQGAYAAANAALDALAER  417 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHHHHH
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence            99999995332           234568999999999998776 7789999999753  33445679999999998764 


Q ss_pred             --hcCCCEEEEEcCccc
Q 024290          216 --DSGLPHVIIRLWPYW  230 (269)
Q Consensus       216 --~~gi~~~ilrp~~i~  230 (269)
                        ..|+++++|+||.+.
T Consensus       418 ~~~~gi~v~sv~pG~~~  434 (511)
T 2z5l_A          418 RRAAGLPATSVAWGLWG  434 (511)
T ss_dssp             HHTTTCCCEEEEECCBC
T ss_pred             HHHcCCcEEEEECCccc
Confidence              579999999999883

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.73  E-value=1e-17  Score=155.68  Aligned_cols=152  Identities=16%  Similarity=0.260  Sum_probs=121.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCC---Cccc---cccC--CCEEEEcCCCCCCcHHHHhc-----
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPA---PADF---LRDW--GATVVNADLSKPETIPATLV-----  147 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~---~~~~---~~~~--~~~~i~~Dl~d~~~l~~~~~-----  147 (269)
                      +++++|||||+|+||.++++.|+++|+ +|++++|+...   ..+.   ++..  .+.++.+|++|.+++.++++     
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            358999999999999999999999998 78888886322   1111   2222  47789999999999998884     


Q ss_pred             -CccEEEEcCCCC-CC-----------ccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          148 -GVHTVIDCATGR-PE-----------EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       148 -~~d~vi~~ag~~-~~-----------~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                       ++|+||||||.. ..           +..+++|+.++.++.+++.+.+.++||++||...  .......|+.+|..++.
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaAaKa~lda  397 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPGYAAANAYLDA  397 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHHHHHHHHHHHH
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHHHHHHHHHHHH
Confidence             479999999954 21           2456789999999999999888889999999753  34455679999999987


Q ss_pred             HHH---hcCCCEEEEEcCcccccC
Q 024290          213 FLQ---DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       213 ~~~---~~gi~~~ilrp~~i~g~~  233 (269)
                      +.+   ..|+++++|.||.+.+..
T Consensus       398 la~~~~~~Gi~v~sV~pG~w~~~g  421 (496)
T 3mje_A          398 LAEHRRSLGLTASSVAWGTWGEVG  421 (496)
T ss_dssp             HHHHHHHTTCCCEEEEECEESSSC
T ss_pred             HHHHHHhcCCeEEEEECCcccCCc
Confidence            764   489999999999887643

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.72  E-value=8.3e-17  Score=140.13  Aligned_cols=156  Identities=11%  Similarity=0.033  Sum_probs=111.2

Q ss_pred             CCCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCC-----------CCCCccc--cccCC----CEEEEcC-----
Q 024290           80 PVRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRP-----------RPAPADF--LRDWG----ATVVNAD-----  135 (269)
Q Consensus        80 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~-----------~~~~~~~--~~~~~----~~~i~~D-----  135 (269)
                      .+++|+++||||+  |+||+++++.|+++|++|++++|+           .++..+.  +....    ...+.+|     
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence            4778999999999  999999999999999999999853           2222211  11101    1334443     


Q ss_pred             ---CC----C--------CCcHHHHh-------cCccEEEEcCCCCC-------------CccchhhcHHHHHHHHHHHH
Q 024290          136 ---LS----K--------PETIPATL-------VGVHTVIDCATGRP-------------EEPIKKVDWEGKVALIQCAK  180 (269)
Q Consensus       136 ---l~----d--------~~~l~~~~-------~~~d~vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~~  180 (269)
                         +.    |        ++++++++       .++|+||||||...             ++..+++|+.++.++++++.
T Consensus        85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  164 (297)
T 1d7o_A           85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence               22    2        56676665       37899999998421             12356789999999999987


Q ss_pred             Hc--CCCeEEEecccCCC--CCCC-CcHHHHHHHHHHHHH--------hcCCCEEEEEcCcccccCcc
Q 024290          181 AM--GIQKYVFYSIHNCD--KHPE-VPLMEIKYCTEQFLQ--------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       181 ~~--~v~r~V~~SS~~~~--~~~~-~~y~~sK~~~e~~~~--------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      ..  ..++||++||....  .... ..|+.+|.+++.+.+        ..|+++++|+||++.+++..
T Consensus       165 ~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~  232 (297)
T 1d7o_A          165 PIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAK  232 (297)
T ss_dssp             GGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSS
T ss_pred             HHhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhh
Confidence            54  12589999987542  2233 489999999987653        26999999999999988643

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.70  E-value=3.1e-17  Score=153.67  Aligned_cols=152  Identities=15%  Similarity=0.127  Sum_probs=118.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEE-eCCCC-------------CCcccc---cc--CCCEEEEcCCCCCCc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYD-VRCL-VRPRP-------------APADFL---RD--WGATVVNADLSKPET  141 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~-V~~~-~R~~~-------------~~~~~~---~~--~~~~~i~~Dl~d~~~  141 (269)
                      .++++|||||+|+||.++++.|+++|+. |+++ +|+..             ...+..   +.  ..+.++.+|++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5689999999999999999999999987 5555 78742             222211   11  247889999999999


Q ss_pred             HHHHhc------CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHcC-----CCeEEEecccCC--CC
Q 024290          142 IPATLV------GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAMG-----IQKYVFYSIHNC--DK  197 (269)
Q Consensus       142 l~~~~~------~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~~-----v~r~V~~SS~~~--~~  197 (269)
                      +.++++      .+|+||||||...           ++..+++|+.++.++.+++....     .++||++||...  ..
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~  409 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG  409 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence            998875      4799999999532           23456789999999999998765     789999999764  33


Q ss_pred             CCCCcHHHHHHHHHHHHHh---cCCCEEEEEcCcccccC
Q 024290          198 HPEVPLMEIKYCTEQFLQD---SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       198 ~~~~~y~~sK~~~e~~~~~---~gi~~~ilrp~~i~g~~  233 (269)
                      .....|+.+|..++.+.++   .|+++++|.||.+-+++
T Consensus       410 ~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm  448 (525)
T 3qp9_A          410 AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSR  448 (525)
T ss_dssp             TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSG
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcccccc
Confidence            4456799999999988754   68999999999995443

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.70  E-value=2.9e-17  Score=156.69  Aligned_cols=151  Identities=16%  Similarity=0.079  Sum_probs=109.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC---------CCCCCccc---cccCCCEEEEcCCCCCCcHHHHh
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR---------PRPAPADF---LRDWGATVVNADLSKPETIPATL  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R---------~~~~~~~~---~~~~~~~~i~~Dl~d~~~l~~~~  146 (269)
                      ..+.+|+++||||+|+||+++++.|+++|++|++++|         +.+...+.   +...+.. +.+|+.|.+++.+++
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~~~~   93 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGAKVI   93 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHHHHH
Confidence            4588999999999999999999999999999999988         32222221   1222333 358999998888776


Q ss_pred             c-------CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCc
Q 024290          147 V-------GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVP  202 (269)
Q Consensus       147 ~-------~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~  202 (269)
                      +       ++|+||||||...           ++..+++|+.++.++++++    ++.+.++||++||...  .......
T Consensus        94 ~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~  173 (613)
T 3oml_A           94 ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVN  173 (613)
T ss_dssp             C----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChH
Confidence            4       5899999999532           2345678999998888877    5556679999999753  3445678


Q ss_pred             HHHHHHHHHHHHHh-------cCCCEEEEEcCccc
Q 024290          203 LMEIKYCTEQFLQD-------SGLPHVIIRLWPYW  230 (269)
Q Consensus       203 y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~  230 (269)
                      |+.+|.+++.+.+.       .||+++.|.||.+-
T Consensus       174 Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t  208 (613)
T 3oml_A          174 YTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS  208 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC
Confidence            99999999987643       68999999999753

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.69  E-value=6.1e-18  Score=149.61  Aligned_cols=151  Identities=15%  Similarity=0.127  Sum_probs=115.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCCCC--CCc---cccccCCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRP--APA---DFLRDWGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-------~V~~~~R~~~--~~~---~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      +|||+||||+||||++++..|+++|+       +|+++++.+.  ...   ..+.+..+.++ +|+.+.+++.++++++|
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D   82 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDAD   82 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCCC
Confidence            36899999999999999999999996       8999988531  111   11222222333 68887788889999999


Q ss_pred             EEEEcCCCC-----CCccchhhcHHHHHHHHHHHHHcC-CC-eEEEecccC----------C-CCCCCCcHHHHHHHHHH
Q 024290          151 TVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMG-IQ-KYVFYSIHN----------C-DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       151 ~vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~-v~-r~V~~SS~~----------~-~~~~~~~y~~sK~~~e~  212 (269)
                      +|||+||..     ...++++.|+.++.++++++++.+ .+ +++++|+..          . ...|..+|+.+|...|+
T Consensus        83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~er  162 (327)
T 1y7t_A           83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNR  162 (327)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHH
T ss_pred             EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHHHHH
Confidence            999999942     224567899999999999999985 65 788877642          1 23456679999999887


Q ss_pred             HH----HhcCCCEEEEEcCcccccCc
Q 024290          213 FL----QDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~----~~~gi~~~ilrp~~i~g~~~  234 (269)
                      +.    +..|++++++|+.++||+..
T Consensus       163 ~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          163 AKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             HHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             HHHHHHHHhCcChhheeeeEEEcCCC
Confidence            65    45799999999999999864

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.69  E-value=1.6e-16  Score=139.66  Aligned_cols=155  Identities=17%  Similarity=0.048  Sum_probs=110.5

Q ss_pred             CCCCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEeCCC-----------CCCccc--cccC----CCEEEEcCC---
Q 024290           79 TPVRPTSILVVGA--TGTLGRQIVRRALDEGYDVRCLVRPR-----------PAPADF--LRDW----GATVVNADL---  136 (269)
Q Consensus        79 ~~~~~~~vlVtGa--tG~iG~~l~~~Ll~~G~~V~~~~R~~-----------~~~~~~--~~~~----~~~~i~~Dl---  136 (269)
                      +.+++|+++||||  +|+||+++++.|+++|++|++++|++           ++..+.  +...    .+.++.+|+   
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCS
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccc
Confidence            3477899999999  89999999999999999999998742           111111  1110    134555543   


Q ss_pred             ---------C--------CCCcHHHHh-------cCccEEEEcCCCCC-------------CccchhhcHHHHHHHHHHH
Q 024290          137 ---------S--------KPETIPATL-------VGVHTVIDCATGRP-------------EEPIKKVDWEGKVALIQCA  179 (269)
Q Consensus       137 ---------~--------d~~~l~~~~-------~~~d~vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~  179 (269)
                               +        |.+++.+++       .++|+||||||...             ++..+++|+.++.++++++
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  164 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHF  164 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence                     2        355676665       37899999998431             1234668999999999988


Q ss_pred             HHcC--CCeEEEecccCCC--CCCC-CcHHHHHHHHHHHHH--------hcCCCEEEEEcCcccccC
Q 024290          180 KAMG--IQKYVFYSIHNCD--KHPE-VPLMEIKYCTEQFLQ--------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       180 ~~~~--v~r~V~~SS~~~~--~~~~-~~y~~sK~~~e~~~~--------~~gi~~~ilrp~~i~g~~  233 (269)
                      ...-  .++||++||....  .... ..|+.+|.+++.+.+        ..|++++.|+||++.+++
T Consensus       165 ~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~  231 (315)
T 2o2s_A          165 GPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRA  231 (315)
T ss_dssp             STTEEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHH
T ss_pred             HHHHhcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchh
Confidence            6531  2599999987542  2223 479999999987653        268999999999998764

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.69  E-value=8.3e-17  Score=141.64  Aligned_cols=155  Identities=14%  Similarity=0.026  Sum_probs=96.6

Q ss_pred             CCCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEeCCC-----------CCCcc--------------ccccCC----
Q 024290           80 PVRPTSILVVGA--TGTLGRQIVRRALDEGYDVRCLVRPR-----------PAPAD--------------FLRDWG----  128 (269)
Q Consensus        80 ~~~~~~vlVtGa--tG~iG~~l~~~Ll~~G~~V~~~~R~~-----------~~~~~--------------~~~~~~----  128 (269)
                      .+.+|+++||||  +++||+++++.|+++|++|++++|++           ++..+              .+...+    
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            467899999999  89999999999999999999998641           11110              011111    


Q ss_pred             -CEEEEcCC------------CC--------CCcHHHHh-------cCccEEEEcCCCCC-------------Cccchhh
Q 024290          129 -ATVVNADL------------SK--------PETIPATL-------VGVHTVIDCATGRP-------------EEPIKKV  167 (269)
Q Consensus       129 -~~~i~~Dl------------~d--------~~~l~~~~-------~~~d~vi~~ag~~~-------------~~~~~~~  167 (269)
                       ..++.+|+            +|        .+++.+++       .++|+||||||...             ++..+++
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v  165 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS  165 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence             34555543            22        44666655       37899999998431             1235678


Q ss_pred             cHHHHHHHHHHHHHcC--CCeEEEecccCCCC--CCC-CcHHHHHHHHHHHHH-------h-cCCCEEEEEcCcccccCc
Q 024290          168 DWEGKVALIQCAKAMG--IQKYVFYSIHNCDK--HPE-VPLMEIKYCTEQFLQ-------D-SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       168 n~~~~~~li~a~~~~~--v~r~V~~SS~~~~~--~~~-~~y~~sK~~~e~~~~-------~-~gi~~~ilrp~~i~g~~~  234 (269)
                      |+.++.++++++...-  .++||++||.....  ... ..|+.+|.+++.+.+       . .|+++++|+||++.+++.
T Consensus       166 N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~  245 (319)
T 2ptg_A          166 SSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAA  245 (319)
T ss_dssp             HTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC----
T ss_pred             hhHHHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhh
Confidence            9999999999987541  26999999976532  223 479999998887653       2 689999999999988753

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.65  E-value=8.8e-16  Score=135.73  Aligned_cols=153  Identities=11%  Similarity=0.004  Sum_probs=112.8

Q ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCC---------C---CCcccccc-----CCCEEEEcCCCCC--C-
Q 024290           83 PTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPR---------P---APADFLRD-----WGATVVNADLSKP--E-  140 (269)
Q Consensus        83 ~~~vlVtGatG--~iG~~l~~~Ll~~G~~V~~~~R~~---------~---~~~~~~~~-----~~~~~i~~Dl~d~--~-  140 (269)
                      +|+++||||++  +||++++++|+++|++|++.+|++         +   ........     ..+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            57899999875  999999999999999999777543         1   11111111     1257788898887  6 


Q ss_pred             -----------------cHHHHh-------cCccEEEEcCCCC--C-----------CccchhhcHHHHHHHHHHHHHcC
Q 024290          141 -----------------TIPATL-------VGVHTVIDCATGR--P-----------EEPIKKVDWEGKVALIQCAKAMG  183 (269)
Q Consensus       141 -----------------~l~~~~-------~~~d~vi~~ag~~--~-----------~~~~~~~n~~~~~~li~a~~~~~  183 (269)
                                       ++.+++       .++|++|||||..  .           ++..+++|+.++..+.+++...-
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             776665       3689999999842  1           23456789999999998886541


Q ss_pred             C--CeEEEecccCC--CCCCCC-cHHHHHHHHHHHHH-------h-cCCCEEEEEcCcccccCcc
Q 024290          184 I--QKYVFYSIHNC--DKHPEV-PLMEIKYCTEQFLQ-------D-SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       184 v--~r~V~~SS~~~--~~~~~~-~y~~sK~~~e~~~~-------~-~gi~~~ilrp~~i~g~~~~  235 (269)
                      .  ++||++||...  ...... .|+.+|.+++.+.+       . .|++++.|.||++.+++..
T Consensus       162 ~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~  226 (329)
T 3lt0_A          162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAAT  226 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHH
T ss_pred             hhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHh
Confidence            1  58999998764  233333 89999999987653       3 6999999999999887543

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.62  E-value=2e-15  Score=135.45  Aligned_cols=155  Identities=19%  Similarity=0.079  Sum_probs=111.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-CCCeEEEEeCCCCCCcc---------------ccccC--CCEEEEcCCCCCCcH
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALD-EGYDVRCLVRPRPAPAD---------------FLRDW--GATVVNADLSKPETI  142 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~-~G~~V~~~~R~~~~~~~---------------~~~~~--~~~~i~~Dl~d~~~l  142 (269)
                      ..+|++|||||+++||+++++.|++ +|++|++++|+.+...+               .+...  .+..+.+|++|++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4578999999999999999999999 99999999987654321               11222  367789999999888


Q ss_pred             HHHh-------cCccEEEEcCCCC----------------CC---------------------c--------cchhhcHH
Q 024290          143 PATL-------VGVHTVIDCATGR----------------PE---------------------E--------PIKKVDWE  170 (269)
Q Consensus       143 ~~~~-------~~~d~vi~~ag~~----------------~~---------------------~--------~~~~~n~~  170 (269)
                      .+++       .++|++|||||..                +.                     +        ..+++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            7775       4689999999852                10                     1        11223333


Q ss_pred             HHH-HHHHHHHHcC----CCeEEEecccCCC--CCCC--CcHHHHHHHHHHHHH-------hc-CCCEEEEEcCcccccC
Q 024290          171 GKV-ALIQCAKAMG----IQKYVFYSIHNCD--KHPE--VPLMEIKYCTEQFLQ-------DS-GLPHVIIRLWPYWAIC  233 (269)
Q Consensus       171 ~~~-~li~a~~~~~----v~r~V~~SS~~~~--~~~~--~~y~~sK~~~e~~~~-------~~-gi~~~ilrp~~i~g~~  233 (269)
                      +.. .+++++...+    -+++|++||.+..  ....  ..|+.+|.+++.+.+       .. |++++++.||.+.++.
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~  284 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQA  284 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHH
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCch
Confidence            333 4455544322    2589999998753  2222  689999999998764       36 9999999999998865


Q ss_pred             cc
Q 024290          234 ST  235 (269)
Q Consensus       234 ~~  235 (269)
                      ..
T Consensus       285 s~  286 (405)
T 3zu3_A          285 SS  286 (405)
T ss_dssp             HH
T ss_pred             hh
Confidence            43

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.62  E-value=1e-15  Score=145.62  Aligned_cols=148  Identities=16%  Similarity=0.084  Sum_probs=108.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC---------CCCcc---ccccCCCEEEEcCCCCCCcHHHHh-
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR---------PAPAD---FLRDWGATVVNADLSKPETIPATL-  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~---------~~~~~---~~~~~~~~~i~~Dl~d~~~l~~~~-  146 (269)
                      .+++|+++||||+++||+++++.|+++|++|++.+|+.         +...+   .+...+... .+|+.|.+++++++ 
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~   83 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVE   83 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHH
Confidence            47789999999999999999999999999999998754         21111   122223333 46888887665554 


Q ss_pred             ------cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcH
Q 024290          147 ------VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPL  203 (269)
Q Consensus       147 ------~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y  203 (269)
                            .++|++|||||...           ++..+++|+.++..+.+++    ++.+-++||++||...  .......|
T Consensus        84 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y  163 (604)
T 2et6_A           84 TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANY  163 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHH
Confidence                  57999999999422           3346678999887776665    4555679999999754  33344679


Q ss_pred             HHHHHHHHHHHH-------hcCCCEEEEEcCc
Q 024290          204 MEIKYCTEQFLQ-------DSGLPHVIIRLWP  228 (269)
Q Consensus       204 ~~sK~~~e~~~~-------~~gi~~~ilrp~~  228 (269)
                      +.+|.+++.+.+       ..||+++.|.|+.
T Consensus       164 ~asKaal~~lt~~la~El~~~gIrVn~v~Pg~  195 (604)
T 2et6_A          164 ASAKSALLGFAETLAKEGAKYNIKANAIAPLA  195 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEccCC
Confidence            999999987764       3799999999973

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.62  E-value=7.9e-16  Score=139.06  Aligned_cols=155  Identities=17%  Similarity=0.085  Sum_probs=111.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-CCCeEEEEeCCCCCCcc---------------ccccC--CCEEEEcCCCCCCcHH
Q 024290           82 RPTSILVVGATGTLGRQIVRRALD-EGYDVRCLVRPRPAPAD---------------FLRDW--GATVVNADLSKPETIP  143 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~-~G~~V~~~~R~~~~~~~---------------~~~~~--~~~~i~~Dl~d~~~l~  143 (269)
                      .+|++|||||+++||+++++.|++ +|++|++++|+.+...+               .++..  .+..+.+|++|+++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            478999999999999999999999 99999999997654432               12222  3677899999998876


Q ss_pred             HHh--------cCccEEEEcCCCC-------------CCcc--------------------------------chhhcHH
Q 024290          144 ATL--------VGVHTVIDCATGR-------------PEEP--------------------------------IKKVDWE  170 (269)
Q Consensus       144 ~~~--------~~~d~vi~~ag~~-------------~~~~--------------------------------~~~~n~~  170 (269)
                      +++        .++|++|||||..             ....                                .+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            654        5689999999851             1000                                1122222


Q ss_pred             HHH-HHHHHHHHcC----CCeEEEecccCCCCC----CCCcHHHHHHHHHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          171 GKV-ALIQCAKAMG----IQKYVFYSIHNCDKH----PEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       171 ~~~-~li~a~~~~~----v~r~V~~SS~~~~~~----~~~~y~~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      +.. .+++++...+    .++||++||......    ....|+.+|.+++.+.+       ..||++++|.||.+.++..
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence            332 4555554332    258999999875321    12578999999998764       3799999999999988765


Q ss_pred             cc
Q 024290          235 TY  236 (269)
Q Consensus       235 ~~  236 (269)
                      ..
T Consensus       300 ~~  301 (422)
T 3s8m_A          300 AA  301 (422)
T ss_dssp             GG
T ss_pred             hc
Confidence            43

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.60  E-value=9.6e-16  Score=154.07  Aligned_cols=153  Identities=14%  Similarity=0.089  Sum_probs=116.2

Q ss_pred             CCCCCCEEEEECCCcH-HHHHHHHHHHHCCCeEEEE-eCCCCCCccccc----c-----CCCEEEEcCCCCCCcHHHHhc
Q 024290           79 TPVRPTSILVVGATGT-LGRQIVRRALDEGYDVRCL-VRPRPAPADFLR----D-----WGATVVNADLSKPETIPATLV  147 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~-iG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~~~----~-----~~~~~i~~Dl~d~~~l~~~~~  147 (269)
                      +.+++|++|||||+|+ ||+++++.|+++|++|+++ .|+.+...+...    .     ..+.++.+|++|.+++.++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            3577899999999998 9999999999999999998 465544332211    1     136788999999999988762


Q ss_pred             -------------CccEEEEcCCCCCC--------------ccchhhcHHHHHHHHHHHHHc------CCCeEEEecccC
Q 024290          148 -------------GVHTVIDCATGRPE--------------EPIKKVDWEGKVALIQCAKAM------GIQKYVFYSIHN  194 (269)
Q Consensus       148 -------------~~d~vi~~ag~~~~--------------~~~~~~n~~~~~~li~a~~~~------~v~r~V~~SS~~  194 (269)
                                   ++|+||||||....              +..+++|+.++..++++++..      +.++||++||..
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA  631 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  631 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence                         58999999994321              234568999999888887322      225899999987


Q ss_pred             CCCCCCCcHHHHHHHHHHHH-Hh------cCCCEEEEEcCcccc
Q 024290          195 CDKHPEVPLMEIKYCTEQFL-QD------SGLPHVIIRLWPYWA  231 (269)
Q Consensus       195 ~~~~~~~~y~~sK~~~e~~~-~~------~gi~~~ilrp~~i~g  231 (269)
                      ........|+.+|.+++.++ +.      ..++++.|.||++.+
T Consensus       632 G~~Gg~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T  675 (1688)
T 2pff_A          632 GTFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG  675 (1688)
T ss_dssp             TTSSCBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred             hccCCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence            65445678999999999983 21      128889999999983

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.59  E-value=2.7e-15  Score=154.87  Aligned_cols=151  Identities=15%  Similarity=0.085  Sum_probs=115.3

Q ss_pred             CCCCCEEEEECCCcH-HHHHHHHHHHHCCCeEEEEe-CCCCCCccc---c----c--cCCCEEEEcCCCCCCcHHHHhc-
Q 024290           80 PVRPTSILVVGATGT-LGRQIVRRALDEGYDVRCLV-RPRPAPADF---L----R--DWGATVVNADLSKPETIPATLV-  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~-iG~~l~~~Ll~~G~~V~~~~-R~~~~~~~~---~----~--~~~~~~i~~Dl~d~~~l~~~~~-  147 (269)
                      .+.+|++|||||+++ ||+++++.|+++|++|++++ |+.++..+.   +    .  ...+.++.+|++|.+++.++++ 
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~  751 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  751 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence            477899999999998 99999999999999999984 554332211   1    1  1236788999999998887652 


Q ss_pred             ------------CccEEEEcCCCCCC--------------ccchhhcHHHHHHHHHHHHHcC------CCeEEEecccCC
Q 024290          148 ------------GVHTVIDCATGRPE--------------EPIKKVDWEGKVALIQCAKAMG------IQKYVFYSIHNC  195 (269)
Q Consensus       148 ------------~~d~vi~~ag~~~~--------------~~~~~~n~~~~~~li~a~~~~~------v~r~V~~SS~~~  195 (269)
                                  ++|+||||||....              +..+++|+.++..++++++...      .++||++||...
T Consensus       752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag  831 (1887)
T 2uv8_A          752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG  831 (1887)
T ss_dssp             HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence                        58999999995321              2345689999999988874332      258999999876


Q ss_pred             CCCCCCcHHHHHHHHHHH-HH----hc--CCCEEEEEcCccc
Q 024290          196 DKHPEVPLMEIKYCTEQF-LQ----DS--GLPHVIIRLWPYW  230 (269)
Q Consensus       196 ~~~~~~~y~~sK~~~e~~-~~----~~--gi~~~ilrp~~i~  230 (269)
                      .......|+.+|.+++.+ .+    +.  .|+++.|.||++.
T Consensus       832 ~~gg~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~  873 (1887)
T 2uv8_A          832 TFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTR  873 (1887)
T ss_dssp             CSSCBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEE
T ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccc
Confidence            544567899999999887 32    12  2899999999998

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.58  E-value=6.8e-16  Score=146.87  Aligned_cols=149  Identities=13%  Similarity=0.116  Sum_probs=107.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC-CCccccccCC--CEEEEcCC-CCCCcH-H---HHhcCccE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP-APADFLRDWG--ATVVNADL-SKPETI-P---ATLVGVHT  151 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~-~~~~~~~~~~--~~~i~~Dl-~d~~~l-~---~~~~~~d~  151 (269)
                      .+++|+++||||+++||+++++.|+++|++|++.+|... +..+.+...+  +..+.+|+ .+.+.+ +   +.+.++|+
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi  398 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI  398 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence            577899999999999999999999999999999886321 1112222222  44566787 544332 2   22457999


Q ss_pred             EEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 024290          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       152 vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~  214 (269)
                      +|||||...           ++..+++|+.++..+.+++    ++.+-++||++||...  .......|+.+|.++..+.
T Consensus       399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt  478 (604)
T 2et6_A          399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLS  478 (604)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHHH
Confidence            999999422           2345678998887776665    4455579999999753  3334457999999998775


Q ss_pred             H-------hcCCCEEEEEcCc
Q 024290          215 Q-------DSGLPHVIIRLWP  228 (269)
Q Consensus       215 ~-------~~gi~~~ilrp~~  228 (269)
                      +       ..||+++.|.||.
T Consensus       479 ~~la~El~~~gIrVn~v~PG~  499 (604)
T 2et6_A          479 KTMAIEGAKNNIKVNIVAPHA  499 (604)
T ss_dssp             HHHHHHHGGGTEEEEEEEECC
T ss_pred             HHHHHHhCccCeEEEEEcCCC
Confidence            4       3799999999994

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.57  E-value=4.2e-15  Score=153.17  Aligned_cols=154  Identities=14%  Similarity=0.028  Sum_probs=115.2

Q ss_pred             CCCCCEEEEECCCcH-HHHHHHHHHHHCCCeEEEEeC-CCCCCcc----c---ccc--CCCEEEEcCCCCCCcHHHHhc-
Q 024290           80 PVRPTSILVVGATGT-LGRQIVRRALDEGYDVRCLVR-PRPAPAD----F---LRD--WGATVVNADLSKPETIPATLV-  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~-iG~~l~~~Ll~~G~~V~~~~R-~~~~~~~----~---~~~--~~~~~i~~Dl~d~~~l~~~~~-  147 (269)
                      .+.+|++|||||+|+ ||.++++.|+++|++|+++++ +.+...+    +   +..  ..+.++.+|++|.+++.++++ 
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            477899999999999 999999999999999999864 3332211    1   111  236788999999999887762 


Q ss_pred             ----------CccEEEEcCCCCCC--------------ccchhhcHHHHHHHHHHHHH--c----CCCeEEEecccCCCC
Q 024290          148 ----------GVHTVIDCATGRPE--------------EPIKKVDWEGKVALIQCAKA--M----GIQKYVFYSIHNCDK  197 (269)
Q Consensus       148 ----------~~d~vi~~ag~~~~--------------~~~~~~n~~~~~~li~a~~~--~----~v~r~V~~SS~~~~~  197 (269)
                                ++|+||||||....              +..+++|+.++.+++++++.  .    +.++||++||.....
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~  808 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF  808 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence                      58999999994321              23456889998888776422  1    235899999987654


Q ss_pred             CCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCccc-ccC
Q 024290          198 HPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYW-AIC  233 (269)
Q Consensus       198 ~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~-g~~  233 (269)
                      .....|+.+|.+++.+.+.       ..++++.|.||++. +++
T Consensus       809 gg~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m  852 (1878)
T 2uv9_A          809 GNDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGL  852 (1878)
T ss_dssp             SCCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTS
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcc
Confidence            4567899999999887532       13899999999998 554

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.53  E-value=2.6e-14  Score=129.75  Aligned_cols=154  Identities=14%  Similarity=-0.033  Sum_probs=108.9

Q ss_pred             CCCCEEEEECCCcHHHHH--HHHHHHHCCCeEEEEeCCCCCCc-----------cc----ccc--CCCEEEEcCCCCCCc
Q 024290           81 VRPTSILVVGATGTLGRQ--IVRRALDEGYDVRCLVRPRPAPA-----------DF----LRD--WGATVVNADLSKPET  141 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~--l~~~Ll~~G~~V~~~~R~~~~~~-----------~~----~~~--~~~~~i~~Dl~d~~~  141 (269)
                      ..+|++|||||+++||.+  +++.|+++|++|++++|+.+...           +.    ...  ..+..+.+|++|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            567999999999999999  99999999999999999754422           11    111  246788999999988


Q ss_pred             HHHHh-------cCccEEEEcCCCC-------------CCcc--------------------------------chhhcH
Q 024290          142 IPATL-------VGVHTVIDCATGR-------------PEEP--------------------------------IKKVDW  169 (269)
Q Consensus       142 l~~~~-------~~~d~vi~~ag~~-------------~~~~--------------------------------~~~~n~  169 (269)
                      +++++       .++|++|||||..             ....                                .+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            87776       3689999999853             1000                                111221


Q ss_pred             HHHH-HHHHHHHHcC----CCeEEEecccCCC--CCCC--CcHHHHHHHHHHHH-------Hh-cCCCEEEEEcCccccc
Q 024290          170 EGKV-ALIQCAKAMG----IQKYVFYSIHNCD--KHPE--VPLMEIKYCTEQFL-------QD-SGLPHVIIRLWPYWAI  232 (269)
Q Consensus       170 ~~~~-~li~a~~~~~----v~r~V~~SS~~~~--~~~~--~~y~~sK~~~e~~~-------~~-~gi~~~ilrp~~i~g~  232 (269)
                      .+.. .+++++...+    ..++|++||.+..  ....  ..|+.+|.+++.+.       .. .|++++++.||.+.++
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            2222 3455554433    2489999998652  2223  67999999998765       34 6899999999999886


Q ss_pred             Cc
Q 024290          233 CS  234 (269)
Q Consensus       233 ~~  234 (269)
                      ..
T Consensus       298 ~s  299 (418)
T 4eue_A          298 AS  299 (418)
T ss_dssp             HH
T ss_pred             hh
Confidence            43

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.53  E-value=1.2e-14  Score=142.16  Aligned_cols=149  Identities=19%  Similarity=0.328  Sum_probs=116.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCC-eEEEEeCCCC---CCccc---cccC--CCEEEEcCCCCCCcHHHHhc----
Q 024290           82 RPTSILVVGATGTLGRQIVRRAL-DEGY-DVRCLVRPRP---APADF---LRDW--GATVVNADLSKPETIPATLV----  147 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll-~~G~-~V~~~~R~~~---~~~~~---~~~~--~~~~i~~Dl~d~~~l~~~~~----  147 (269)
                      .+++++||||+|+||+++++.|+ ++|+ +|++++|+..   ...+.   ++..  .+.++.||++|.+++.++++    
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            56899999999999999999999 7998 5999999732   22222   2222  36788999999999998874    


Q ss_pred             --CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          148 --GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       148 --~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                        .+|+||||||...           ++..+++|+.|+.++.+++.. .. +||++||...  .......|+.+|...+.
T Consensus       609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~g~~~YaAaka~~~a  686 (795)
T 3slk_A          609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGSGGQGNYAAANSFLDA  686 (795)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTCSSCHHHHHHHHHHHH
T ss_pred             hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCCCCCHHHHHHHHHHHH
Confidence              4799999999532           234566889999999998833 33 8999999754  44456689999988776


Q ss_pred             HH---HhcCCCEEEEEcCccccc
Q 024290          213 FL---QDSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       213 ~~---~~~gi~~~ilrp~~i~g~  232 (269)
                      +.   +..|++++.|.||.+.+.
T Consensus       687 lA~~~~~~Gi~v~sI~pG~v~t~  709 (795)
T 3slk_A          687 LAQQRQSRGLPTRSLAWGPWAEH  709 (795)
T ss_dssp             HHHHHHHTTCCEEEEEECCCSCC
T ss_pred             HHHHHHHcCCeEEEEECCeECcc
Confidence            65   458999999999988754

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.40  E-value=3.6e-13  Score=100.35  Aligned_cols=95  Identities=25%  Similarity=0.257  Sum_probs=78.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      ++++|+|+|+ |++|+.+++.|++.| ++|++++|++++... +...++.++.+|+.+.+.+.++++++|+||++++.. 
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~-   80 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAV-LNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFF-   80 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHH-HHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG-
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHH-HHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCch-
Confidence            4578999999 999999999999999 999999997654433 234578899999999999999999999999999621 


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEE
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVF  189 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~  189 (269)
                                ....+++++.+.|+++|.+
T Consensus        81 ----------~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           81 ----------LTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             ----------GHHHHHHHHHHTTCEEECC
T ss_pred             ----------hhHHHHHHHHHhCCCEEEe
Confidence                      1367888999999865543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.35  E-value=3.7e-12  Score=137.04  Aligned_cols=150  Identities=15%  Similarity=0.173  Sum_probs=114.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCCCCCc---cc---cccC--CCEEEEcCCCCCCcHHHHh------
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAPA---DF---LRDW--GATVVNADLSKPETIPATL------  146 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~-V~~~~R~~~~~~---~~---~~~~--~~~~i~~Dl~d~~~l~~~~------  146 (269)
                      .+|+++||||+|+||+++++.|+++|++ |++++|+..+..   +.   +...  .+.++.+|++|.+++++++      
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            5789999999999999999999999997 778888765432   11   1222  3567889999999887776      


Q ss_pred             cCccEEEEcCCC-----------CCCccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          147 VGVHTVIDCATG-----------RPEEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       147 ~~~d~vi~~ag~-----------~~~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      ..+|+||||||.           ..++..+++|+.|+.++.+++...  ..++||++||...  .......|+.+|.+++
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKaal~ 2042 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSAME 2042 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHHHHH
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHHHHH
Confidence            368999999994           234567789999999998887654  3469999999753  3344567999999999


Q ss_pred             HHHH---hcCCCEEEEEcCcccc
Q 024290          212 QFLQ---DSGLPHVIIRLWPYWA  231 (269)
Q Consensus       212 ~~~~---~~gi~~~ilrp~~i~g  231 (269)
                      .+.+   ..|++...+..|.+-+
T Consensus      2043 ~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2043 RICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             HHHHHHHHTTSCCCEEEECCBCT
T ss_pred             HHHHHHHHCCCcEEEEEccCcCC
Confidence            8775   5789888888876543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.29  E-value=1e-11  Score=134.05  Aligned_cols=151  Identities=14%  Similarity=-0.013  Sum_probs=106.1

Q ss_pred             CCCCCEEEEECCCcH-HHHHHHHHHHHCCCeEEEEeCCCCC-----Cccc---cccC--CCEEEEcCCCCCCcHHHHh--
Q 024290           80 PVRPTSILVVGATGT-LGRQIVRRALDEGYDVRCLVRPRPA-----PADF---LRDW--GATVVNADLSKPETIPATL--  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~-iG~~l~~~Ll~~G~~V~~~~R~~~~-----~~~~---~~~~--~~~~i~~Dl~d~~~l~~~~--  146 (269)
                      .+++|+++||||+++ ||+++++.|+++|++|++++|+.+.     ..+.   +...  .+..+.+|++|.+++++++  
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            378999999999999 9999999999999999999998654     2222   1222  2567899999999887764  


Q ss_pred             ---------cCccEEEEcCCC----C---------C---Cccc----hhhcHHHHHHHHHHHH----HcCCC---e-EEE
Q 024290          147 ---------VGVHTVIDCATG----R---------P---EEPI----KKVDWEGKVALIQCAK----AMGIQ---K-YVF  189 (269)
Q Consensus       147 ---------~~~d~vi~~ag~----~---------~---~~~~----~~~n~~~~~~li~a~~----~~~v~---r-~V~  189 (269)
                               .++|++|||||.    .         .   ++..    +++|+.++..+++++.    +.+..   . ++.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence                     258999999995    0         1   1122    5667777777666653    33332   2 223


Q ss_pred             ecccCCCCCCCCcHHHHHHHHHHHHH----h----cCCCEEEEEcCccc
Q 024290          190 YSIHNCDKHPEVPLMEIKYCTEQFLQ----D----SGLPHVIIRLWPYW  230 (269)
Q Consensus       190 ~SS~~~~~~~~~~y~~sK~~~e~~~~----~----~gi~~~ilrp~~i~  230 (269)
                      .|+..........|+.+|.+++.+.+    +    .+++++.+.||++.
T Consensus      2293 ~ss~~g~~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~ 2341 (3089)
T 3zen_D         2293 GSPNRGMFGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTK 2341 (3089)
T ss_dssp             ECSSTTSCSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEE
T ss_pred             CCcccccCCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccC
Confidence            33332222234579999999987764    2    25788999999987

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.10  E-value=3.1e-10  Score=87.15  Aligned_cols=101  Identities=14%  Similarity=0.171  Sum_probs=75.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGR  159 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~  159 (269)
                      +++++|+|+|+ |.+|+.+++.|.+.|++|++++++++.... +...+..++.+|..+.+.+.++ ++++|+||++++..
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~-~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~   81 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA-YASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN   81 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT-TTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence            45678999997 999999999999999999999997544332 3334667888999887777765 67899999998732


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                               ......+.+.+++.+.+++|..++
T Consensus        82 ---------~~~~~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           82 ---------IQASTLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             ---------HHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             ---------hHHHHHHHHHHHHcCCCeEEEEeC
Confidence                     122234667778888877776554

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.06  E-value=7.4e-11  Score=102.10  Aligned_cols=79  Identities=18%  Similarity=0.209  Sum_probs=66.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc----CCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD----WGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~----~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      .+.+|+++||||+|++|+++++.|+++|++|++++|+.++..+..++    .++.++.+|++|.+++.++++++|+||||
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~  195 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA  195 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence            46789999999999999999999999999999999975543322211    25677889999999999999999999999


Q ss_pred             CCC
Q 024290          156 ATG  158 (269)
Q Consensus       156 ag~  158 (269)
                      ++.
T Consensus       196 ag~  198 (287)
T 1lu9_A          196 GAI  198 (287)
T ss_dssp             CCT
T ss_pred             CCc
Confidence            974

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.99  E-value=6.8e-10  Score=97.82  Aligned_cols=110  Identities=13%  Similarity=0.061  Sum_probs=79.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCc-cccccCCCE-EEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPA-DFLRDWGAT-VVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~-~~~~~~~~~-~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      +++||+||||+|++|..++..|+++|  ++|++++++++... ..+.+.... .+.+ +.+.+++.++++++|+|||++|
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvVi~~ag   85 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAALTGMDLIIVPAG   85 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHHcCCCCEEEEcCC
Confidence            34689999999999999999999999  89999998654100 001111111 1122 2223467788999999999998


Q ss_pred             CCC-----CccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          158 GRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       158 ~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      ...     ..++...|+.+++++++++.+.+.+.+|+++|
T Consensus        86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            422     24567799999999999999998887888775

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.98  E-value=4.8e-10  Score=102.95  Aligned_cols=104  Identities=19%  Similarity=0.214  Sum_probs=77.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC-CCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~-~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      |++++|+|+| +|++|+++++.|++.|++|++++|+.++..+..... ++..+.+|+.|.+++.++++++|+||||++..
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~   79 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT   79 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence            4568999998 799999999999999999999999765443333322 36788899999889999999999999999853


Q ss_pred             CCc-----------cchhh--cHHHHHHHHHHHHHcCCC
Q 024290          160 PEE-----------PIKKV--DWEGKVALIQCAKAMGIQ  185 (269)
Q Consensus       160 ~~~-----------~~~~~--n~~~~~~li~a~~~~~v~  185 (269)
                      ...           .+.+.  ......+++++++++|+.
T Consensus        80 ~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~  118 (450)
T 1ff9_A           80 FHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT  118 (450)
T ss_dssp             CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred             cchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence            211           11111  123567899999999873

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.98  E-value=3.1e-10  Score=100.17  Aligned_cols=151  Identities=11%  Similarity=0.085  Sum_probs=101.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCC----CCCCc---cccccCCCEEEEcCCCCCCcHHHHhc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRP----RPAPA---DFLRDWGATVVNADLSKPETIPATLV  147 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~-------~V~~~~R~----~~~~~---~~~~~~~~~~i~~Dl~d~~~l~~~~~  147 (269)
                      +.+||+||||+|++|++++..|+..|+       +|++++++    .++..   ..+.+....+ ..|+...+++.++++
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~   82 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFK   82 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhC
Confidence            346899999999999999999999885       89998886    22111   0112211111 246666678889999


Q ss_pred             CccEEEEcCCCCC-----CccchhhcHHHHHHHHHHHHHcC-CC-eEEEecccC----------C-CCCCCCcHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMG-IQ-KYVFYSIHN----------C-DKHPEVPLMEIKYC  209 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~-v~-r~V~~SS~~----------~-~~~~~~~y~~sK~~  209 (269)
                      ++|+|||+||...     ..++...|+..++++++++++.+ .+ +||++|...          . ..++...|+.++..
T Consensus        83 ~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~t~Ld  162 (329)
T 1b8p_A           83 DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLD  162 (329)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHH
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcCCCCHHHEEEeecHH
Confidence            9999999999432     23456789999999999999884 66 888888521          1 11223345555543


Q ss_pred             HHH----HHHhcCCCEEEEEcCcccccC
Q 024290          210 TEQ----FLQDSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       210 ~e~----~~~~~gi~~~ilrp~~i~g~~  233 (269)
                      ..+    +.+..|++...++..+++|+.
T Consensus       163 ~~r~~~~la~~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          163 HNRALSQIAAKTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             HHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred             HHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence            322    234578777667766677754

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.98  E-value=1.1e-09  Score=84.23  Aligned_cols=99  Identities=18%  Similarity=0.178  Sum_probs=73.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGR  159 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~  159 (269)
                      +++++|+|+|+ |.+|+.+++.|.++|++|++++++++.... +.+.++.++.+|.++++.+.++ ++++|+||.+.+. 
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~-~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~-   80 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIEL-LEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSD-   80 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH-HHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHH-HHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCC-
Confidence            34578999997 999999999999999999999997654333 3345788999999999888776 4679999998861 


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                               ......++..+++.+..++|...
T Consensus        81 ---------~~~n~~~~~~a~~~~~~~iia~~  103 (141)
T 3llv_A           81 ---------DEFNLKILKALRSVSDVYAIVRV  103 (141)
T ss_dssp             ---------HHHHHHHHHHHHHHCCCCEEEEE
T ss_pred             ---------HHHHHHHHHHHHHhCCceEEEEE
Confidence                     12234466667777755555433

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.98  E-value=1e-08  Score=91.34  Aligned_cols=155  Identities=11%  Similarity=0.058  Sum_probs=104.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHH-HCCCeEEEEeCCCCCCccc---------------ccc--CCCEEEEcCCCCCCcH
Q 024290           81 VRPTSILVVGATGTLGRQIVRRAL-DEGYDVRCLVRPRPAPADF---------------LRD--WGATVVNADLSKPETI  142 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll-~~G~~V~~~~R~~~~~~~~---------------~~~--~~~~~i~~Dl~d~~~l  142 (269)
                      ..+|++|||||++++|.+.+..|+ ..|.+|+++.+..+...+.               .++  ..+..+.||+.|++.+
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            567999999999999999999998 6799999999865543221               111  2467899999999888


Q ss_pred             HHHh-------cCccEEEEcCCCCCCc-----------------------------c--------chhhcHHHHHH----
Q 024290          143 PATL-------VGVHTVIDCATGRPEE-----------------------------P--------IKKVDWEGKVA----  174 (269)
Q Consensus       143 ~~~~-------~~~d~vi~~ag~~~~~-----------------------------~--------~~~~n~~~~~~----  174 (269)
                      ++++       .++|+|||+++.....                             .        ..+-++.++..    
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~  207 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGG  207 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhh
Confidence            8876       4789999999832100                             0        00112233332    


Q ss_pred             -----HHHHHHHcCC----CeEEEecccCCCCC----CCCcHHHHHHHHHHHHHh-----cCCCEEEEEcCcccccCcc
Q 024290          175 -----LIQCAKAMGI----QKYVFYSIHNCDKH----PEVPLMEIKYCTEQFLQD-----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       175 -----li~a~~~~~v----~r~V~~SS~~~~~~----~~~~y~~sK~~~e~~~~~-----~gi~~~ilrp~~i~g~~~~  235 (269)
                           .+++....++    .++|.+|+.+....    ....+|.+|..+|...+.     .++++.++.++.+.+.-..
T Consensus       208 s~~s~w~~al~~a~lla~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~v~v~~a~vT~Ass  286 (401)
T 4ggo_A          208 EDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPSIRAFVSVNKGLVTRASA  286 (401)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCCCCCTTGG
T ss_pred             hHHHHHHHHHHhhhcccCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcCccccchhh
Confidence                 2344444432    47888888775322    123579999999976643     4677888888877765433

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.94  E-value=3.7e-09  Score=80.67  Aligned_cols=123  Identities=18%  Similarity=0.201  Sum_probs=85.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~~~  161 (269)
                      +|+|+|+|+ |.+|+.+++.|.+.|++|++++|+++.........++.++.+|..+.+.+.+. ++++|+||++.+..  
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~--   80 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE--   80 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH--
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc--
Confidence            468999986 99999999999999999999999765443332234677889999887777654 67899999997521  


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEEEEEcCcccc
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWA  231 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g  231 (269)
                          ..|    ..+.+.++..+.+++|...+..       .+       ++.+++.|++++ +.|..+.+
T Consensus        81 ----~~~----~~~~~~~~~~~~~~ii~~~~~~-------~~-------~~~l~~~g~~~v-~~p~~~~~  127 (140)
T 1lss_A           81 ----EVN----LMSSLLAKSYGINKTIARISEI-------EY-------KDVFERLGVDVV-VSPELIAA  127 (140)
T ss_dssp             ----HHH----HHHHHHHHHTTCCCEEEECSST-------TH-------HHHHHHTTCSEE-ECHHHHHH
T ss_pred             ----hHH----HHHHHHHHHcCCCEEEEEecCH-------hH-------HHHHHHcCCCEE-ECHHHHHH
Confidence                122    3456677777877877644311       11       235567787754 66655544

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.87  E-value=2.9e-08  Score=77.66  Aligned_cols=101  Identities=16%  Similarity=0.193  Sum_probs=74.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGR  159 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~  159 (269)
                      ..+++|+|+|+ |.+|..+++.|.+.|++|++++|+++.........++.++.+|..+.+.+.++ ++++|+||.+.+..
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~   95 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD   95 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence            45679999995 99999999999999999999999866554432145778888998887766665 67899999998621


Q ss_pred             CCccchhhcHHHHHHHHHHHHH-cCCCeEEEecc
Q 024290          160 PEEPIKKVDWEGKVALIQCAKA-MGIQKYVFYSI  192 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~-~~v~r~V~~SS  192 (269)
                                .....+++.++. .+..++|....
T Consensus        96 ----------~~~~~~~~~~~~~~~~~~iv~~~~  119 (155)
T 2g1u_A           96 ----------STNFFISMNARYMFNVENVIARVY  119 (155)
T ss_dssp             ----------HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred             ----------HHHHHHHHHHHHHCCCCeEEEEEC
Confidence                      222345566666 56666666553

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.85  E-value=2.7e-09  Score=96.71  Aligned_cols=91  Identities=13%  Similarity=0.207  Sum_probs=71.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeCCCCCCcccccc------CCCEEEEcCCCCCCcHHHHhcC--ccE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAPADFLRD------WGATVVNADLSKPETIPATLVG--VHT  151 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G---~~V~~~~R~~~~~~~~~~~------~~~~~i~~Dl~d~~~l~~~~~~--~d~  151 (269)
                      |++|+|+|| |++|+.+++.|++.|   .+|++.+|+.++..+....      .++..+.+|++|.+++.+++++  +|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            468999998 999999999999998   3899999986654333221      2488899999999999999987  899


Q ss_pred             EEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCC
Q 024290          152 VIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQ  185 (269)
Q Consensus       152 vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~  185 (269)
                      ||||++...           ...++++|.+.|+.
T Consensus        80 Vin~ag~~~-----------~~~v~~a~l~~g~~  102 (405)
T 4ina_A           80 VLNIALPYQ-----------DLTIMEACLRTGVP  102 (405)
T ss_dssp             EEECSCGGG-----------HHHHHHHHHHHTCC
T ss_pred             EEECCCccc-----------ChHHHHHHHHhCCC
Confidence            999998311           14677788888864

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.85  E-value=6.4e-09  Score=91.05  Aligned_cols=108  Identities=13%  Similarity=0.085  Sum_probs=74.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeC--CCCCCcc---ccccC-CCEEEEcCCCCC-CcHHHHhcCccEEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVR--PRPAPAD---FLRDW-GATVVNADLSKP-ETIPATLVGVHTVID  154 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R--~~~~~~~---~~~~~-~~~~i~~Dl~d~-~~l~~~~~~~d~vi~  154 (269)
                      |||+||||+|++|++++..|+.+|.  ++.++++  +.++...   .+.+. ...-...++.+. +++.++++++|+|||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~   80 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence            4899999999999999999998884  6888887  4321110   01110 000001122221 236778899999999


Q ss_pred             cCCCCC-----CccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          155 CATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       155 ~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      +||...     ..++...|+.+++++++++++.+ +.+|+++|
T Consensus        81 ~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S  122 (313)
T 1hye_A           81 TSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT  122 (313)
T ss_dssp             CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence            999422     23467789999999999999998 87887776

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.84  E-value=1.4e-08  Score=79.33  Aligned_cols=99  Identities=14%  Similarity=0.163  Sum_probs=72.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Cccc--cccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADF--LRDWGATVVNADLSKPETIPAT-LVGVHTVIDCA  156 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~--~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~a  156 (269)
                      |..++|+|+|+ |.+|+.+++.|.+.|++|++++++++. ....  ....++.++.+|.++++.+.++ ++++|+||.+.
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence            34578999995 999999999999999999999997422 1111  1134789999999999988887 88999999987


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHc-CCCeEEEe
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAM-GIQKYVFY  190 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~  190 (269)
                      +..          .....+...+++. +..++|..
T Consensus        80 ~~d----------~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           80 DND----------ADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SCH----------HHHHHHHHHHHHHTSSSCEEEE
T ss_pred             CCh----------HHHHHHHHHHHHHCCCCEEEEE
Confidence            621          2223455566665 55566553

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.78  E-value=2.9e-09  Score=92.82  Aligned_cols=102  Identities=13%  Similarity=-0.016  Sum_probs=73.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeC--CCCCCcc---cccc-----CCCEEEEcCCCCCCcHHHHhcCccE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVR--PRPAPAD---FLRD-----WGATVVNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R--~~~~~~~---~~~~-----~~~~~i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      |||+||||+|++|..++..|+..|.  +++++++  +.++...   .+.+     ..+.+.. |     + .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~-----~-~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G-----G-YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C-----C-GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C-----C-HHHhCCCCE
Confidence            5899999999999999999998885  6888887  4322111   0111     1222222 1     1 456889999


Q ss_pred             EEEcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          152 VIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       152 vi~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      |||+++...     ..++...|+..++++++++++.+.+.+|+++|
T Consensus        74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            999999432     12466789999999999999998888888775

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.77  E-value=2.7e-09  Score=98.31  Aligned_cols=104  Identities=13%  Similarity=0.186  Sum_probs=76.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+++++|+|+|+ |++|+.+++.|++. |++|++++|+.++..++....++..+.+|+.|.+++.++++++|+||||++.
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~   98 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPY   98 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence            356789999997 99999999999998 7899999998655444333335778889999988898999999999999984


Q ss_pred             CCC-----------ccchhhcH--HHHHHHHHHHHHcCC
Q 024290          159 RPE-----------EPIKKVDW--EGKVALIQCAKAMGI  184 (269)
Q Consensus       159 ~~~-----------~~~~~~n~--~~~~~li~a~~~~~v  184 (269)
                      ...           ..+++.+.  .....++++++++|+
T Consensus        99 ~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv  137 (467)
T 2axq_A           99 TFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI  137 (467)
T ss_dssp             GGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC
T ss_pred             hhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC
Confidence            311           11222221  234677888888876

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.73  E-value=2.2e-08  Score=80.46  Aligned_cols=97  Identities=14%  Similarity=0.153  Sum_probs=73.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH--hcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT--LVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~--~~~~d~vi~~ag  157 (269)
                      +.+++|+|+| .|.+|..+++.|.+. |++|+++++++++... +...++.++.+|.++++.+.++  ++++|+||.+.+
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~-~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQ-HRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH-HHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHH-HHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence            5567899998 599999999999999 9999999998654433 3445788899999988878777  788999999876


Q ss_pred             CCCCccchhhcHHHHHHHHHHHHHcC-CCeEEE
Q 024290          158 GRPEEPIKKVDWEGKVALIQCAKAMG-IQKYVF  189 (269)
Q Consensus       158 ~~~~~~~~~~n~~~~~~li~a~~~~~-v~r~V~  189 (269)
                      .          ......++..+++.+ ..++|.
T Consensus       115 ~----------~~~~~~~~~~~~~~~~~~~ii~  137 (183)
T 3c85_A          115 H----------HQGNQTALEQLQRRNYKGQIAA  137 (183)
T ss_dssp             S----------HHHHHHHHHHHHHTTCCSEEEE
T ss_pred             C----------hHHHHHHHHHHHHHCCCCEEEE
Confidence            2          223345566777766 335554

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.67  E-value=5.5e-08  Score=80.40  Aligned_cols=96  Identities=19%  Similarity=0.291  Sum_probs=73.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCCCCc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPEE  162 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~~~~  162 (269)
                      |+|+|+|+ |.+|+++++.|.++|++|++++++++...+.....++.++.+|.++++.+.++ ++++|+||.+.+..   
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d---   76 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD---   76 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH---
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc---
Confidence            47999996 99999999999999999999999866554433445789999999999988877 68899999887521   


Q ss_pred             cchhhcHHHHHHHHHHHHH-cCCCeEEEe
Q 024290          163 PIKKVDWEGKVALIQCAKA-MGIQKYVFY  190 (269)
Q Consensus       163 ~~~~~n~~~~~~li~a~~~-~~v~r~V~~  190 (269)
                             .....+...+++ .+..++|..
T Consensus        77 -------~~n~~~~~~a~~~~~~~~iia~   98 (218)
T 3l4b_C           77 -------EVNLFIAQLVMKDFGVKRVVSL   98 (218)
T ss_dssp             -------HHHHHHHHHHHHTSCCCEEEEC
T ss_pred             -------HHHHHHHHHHHHHcCCCeEEEE
Confidence                   112335555665 566676654

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.66  E-value=3.4e-08  Score=88.20  Aligned_cols=94  Identities=23%  Similarity=0.215  Sum_probs=72.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~  161 (269)
                      ..|||+|.|| |++|+.+++.|.+ .++|.+.+|+.++..+.  ...+..+.+|+.|.+++.++++++|+||++++..  
T Consensus        15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~--~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~--   88 (365)
T 3abi_A           15 RHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV--KEFATPLKVDASNFDKLVEVMKEFELVIGALPGF--   88 (365)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH--TTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG--
T ss_pred             CccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH--hccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc--
Confidence            3468999998 9999999988865 58999999976544332  2356788999999999999999999999998732  


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                         +      ...++++|.++|+ ++|=+|
T Consensus        89 ---~------~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           89 ---L------GFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             ---G------HHHHHHHHHHHTC-EEEECC
T ss_pred             ---c------cchHHHHHHhcCc-ceEeee
Confidence               1      1357788888885 666655

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.63  E-value=8.1e-08  Score=79.78  Aligned_cols=74  Identities=18%  Similarity=0.246  Sum_probs=55.7

Q ss_pred             CCCCCEEEEECC----------------CcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHH
Q 024290           80 PVRPTSILVVGA----------------TGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP  143 (269)
Q Consensus        80 ~~~~~~vlVtGa----------------tG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~  143 (269)
                      .+.+|+||||||                +|++|.++++.|+++|++|++++++.. ...   ..++.  .+|+.+.+++.
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~---~~g~~--~~dv~~~~~~~   78 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT---PPFVK--RVDVMTALEME   78 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC---CTTEE--EEECCSHHHHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc---CCCCe--EEccCcHHHHH
Confidence            478899999999                799999999999999999999988642 111   11333  45777765544


Q ss_pred             HH----hcCccEEEEcCCCC
Q 024290          144 AT----LVGVHTVIDCATGR  159 (269)
Q Consensus       144 ~~----~~~~d~vi~~ag~~  159 (269)
                      +.    +.++|++|||||..
T Consensus        79 ~~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           79 AAVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             HHHHHHGGGCSEEEECCBCC
T ss_pred             HHHHHhcCCCCEEEECCccc
Confidence            33    45799999999953

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.61  E-value=8.1e-08  Score=80.01  Aligned_cols=76  Identities=18%  Similarity=0.320  Sum_probs=53.7

Q ss_pred             CCCEEEEECC----------------CcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcH---
Q 024290           82 RPTSILVVGA----------------TGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI---  142 (269)
Q Consensus        82 ~~~~vlVtGa----------------tG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l---  142 (269)
                      .+|+||||||                +|++|.+++++|+++|++|++++|+......  ...++.++  |+...+++   
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~--~~~~~~~~--~v~s~~em~~~   77 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE--PHPNLSIR--EITNTKDLLIE   77 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC--CCTTEEEE--ECCSHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc--CCCCeEEE--EHhHHHHHHHH
Confidence            4789999999                9999999999999999999999997432110  01244444  44444333   


Q ss_pred             -HHHhcCccEEEEcCCCCCC
Q 024290          143 -PATLVGVHTVIDCATGRPE  161 (269)
Q Consensus       143 -~~~~~~~d~vi~~ag~~~~  161 (269)
                       .+.+.++|++||+|+..++
T Consensus        78 v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           78 MQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             HHHHGGGCSEEEECSBCCSE
T ss_pred             HHHhcCCCCEEEEcCccccc
Confidence             3334679999999996543

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.51  E-value=6.7e-08  Score=85.16  Aligned_cols=109  Identities=12%  Similarity=0.073  Sum_probs=76.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--e-----EEEEeCCCC--CC---ccccccCCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY--D-----VRCLVRPRP--AP---ADFLRDWGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~--~-----V~~~~R~~~--~~---~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      .+||+||||+|+||++++..|+..|.  +     ++++++++.  ..   ...+.+....+. .++...+...+.++++|
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~daD   81 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATDKEEIAFKDLD   81 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTTTCS
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcCCcHHHhCCCC
Confidence            36899999999999999999998874  5     888888531  11   011122111111 12333455677889999


Q ss_pred             EEEEcCCC-----CCCccchhhcHHHHHHHHHHHHHcCCC--eEEEecc
Q 024290          151 TVIDCATG-----RPEEPIKKVDWEGKVALIQCAKAMGIQ--KYVFYSI  192 (269)
Q Consensus       151 ~vi~~ag~-----~~~~~~~~~n~~~~~~li~a~~~~~v~--r~V~~SS  192 (269)
                      +||++||.     ....+.++.|....+.+++++++.+.+  +++.+|-
T Consensus        82 vVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           82 VAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             EEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            99999984     234567789999999999999998865  5777663

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.44  E-value=6.5e-07  Score=68.69  Aligned_cols=73  Identities=19%  Similarity=0.253  Sum_probs=61.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag  157 (269)
                      .++|+|+|. |.+|+.+++.|.+.|++|++++++++.... +.+.++.++.+|.++++.+.++ ++++|+||.+.+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~-~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDE-LRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH-HHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH-HHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence            357999995 999999999999999999999998665433 3446889999999998888765 568899998876

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.41  E-value=2.8e-07  Score=80.61  Aligned_cols=105  Identities=15%  Similarity=0.140  Sum_probs=73.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCc-cccccCCCEEEEcCCCC---CCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPA-DFLRDWGATVVNADLSK---PETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~-~~~~~~~~~~i~~Dl~d---~~~l~~~~~~~d~vi~~ag  157 (269)
                      |||.|+||+|++|..++..|+..|  .+|+++++++.+.. ..+.+...   .+++..   .++++++++++|+||+++|
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~---~~~l~~~~~t~d~~~a~~~aDvVvi~ag   77 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET---RATVKGYLGPEQLPDCLKGCDVVVIPAG   77 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSS---SCEEEEEESGGGHHHHHTTCSEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCc---CceEEEecCCCCHHHHhCCCCEEEECCC
Confidence            489999999999999999999888  79999999751100 01111110   011221   1457778999999999998


Q ss_pred             CCC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          158 GRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       158 ~~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      ...     ..+....|....+.+++.+.+.... ++|++|
T Consensus        78 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           78 VPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             CCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             cCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            422     2345677888899999998887654 677754

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.39  E-value=1.5e-06  Score=74.36  Aligned_cols=75  Identities=23%  Similarity=0.301  Sum_probs=44.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-CCCeEEEE-eCCCCCC--ccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALD-EGYDVRCL-VRPRPAP--ADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~-~G~~V~~~-~R~~~~~--~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      +++++|+|+|++|.+|+.+++.+.+ .|++++++ +++++..  .+..+..++.  ..++...+++.++++++|+||+++
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~--~~~v~~~~dl~~~l~~~DvVIDft   80 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG--KTGVTVQSSLDAVKDDFDVFIDFT   80 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS--CCSCCEESCSTTTTTSCSEEEECS
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCC--cCCceecCCHHHHhcCCCEEEEcC
Confidence            4457999999999999999999875 57888855 4443221  1110000110  011211233444556789999877


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      .
T Consensus        81 ~   81 (273)
T 1dih_A           81 R   81 (273)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.39  E-value=3.9e-07  Score=76.02  Aligned_cols=94  Identities=13%  Similarity=0.119  Sum_probs=70.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~~~  161 (269)
                      .++++|+|+ |.+|+.+++.|.+.|+ |++++++++.... +. .++.++.+|.+|++.+.++ ++++|.||.+.+..  
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~-~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d--   82 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKV-LR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESD--   82 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHH-HH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCH--
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHH-Hh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCc--
Confidence            468999996 9999999999999999 9999987654433 23 5789999999999988877 78999999887521  


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCC-eEEEe
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQ-KYVFY  190 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~-r~V~~  190 (269)
                              .....+...+++.+.+ ++|.-
T Consensus        83 --------~~n~~~~~~a~~~~~~~~iia~  104 (234)
T 2aef_A           83 --------SETIHCILGIRKIDESVRIIAE  104 (234)
T ss_dssp             --------HHHHHHHHHHHHHCSSSEEEEE
T ss_pred             --------HHHHHHHHHHHHHCCCCeEEEE
Confidence                    2223455666776665 55543

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.31  E-value=3.9e-07  Score=73.87  Aligned_cols=98  Identities=17%  Similarity=0.181  Sum_probs=66.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~a  156 (269)
                      .+++|+|+||+|+||..+++.+...|++|++++|++++.. .+.+.+... ..|+.+.+..+.+.     .++|+||+|+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~-~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~  115 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE-MLSRLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNSL  115 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECC
Confidence            4689999999999999999999999999999999754332 233345433 34777665444332     2589999999


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      |.    .       .....++.++..  +++|.+++..
T Consensus       116 g~----~-------~~~~~~~~l~~~--G~~v~~g~~~  140 (198)
T 1pqw_A          116 AG----E-------AIQRGVQILAPG--GRFIELGKKD  140 (198)
T ss_dssp             CT----H-------HHHHHHHTEEEE--EEEEECSCGG
T ss_pred             ch----H-------HHHHHHHHhccC--CEEEEEcCCC
Confidence            72    1       122344444433  4899988754

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.24  E-value=5.3e-06  Score=75.14  Aligned_cols=95  Identities=16%  Similarity=0.236  Sum_probs=73.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~~~  161 (269)
                      .++|+|+|. |.+|+.+++.|.+.|++|++++++++.... +...++.++.+|.++++.+.++ ++++|+||.+.+.   
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~-~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~---   78 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIET-LRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD---   78 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHH-HHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSS---
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH-HHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCC---
Confidence            357999995 999999999999999999999998665433 3456888999999999999887 7889999988751   


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCC-eEEE
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQ-KYVF  189 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~-r~V~  189 (269)
                             -.....++..+++.+.. ++|.
T Consensus        79 -------~~~n~~i~~~ar~~~p~~~Iia  100 (413)
T 3l9w_A           79 -------PQTNLQLTEMVKEHFPHLQIIA  100 (413)
T ss_dssp             -------HHHHHHHHHHHHHHCTTCEEEE
T ss_pred             -------hHHHHHHHHHHHHhCCCCeEEE
Confidence                   23345566677776654 4443

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.23  E-value=1.9e-06  Score=76.05  Aligned_cols=75  Identities=27%  Similarity=0.403  Sum_probs=57.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc-----CccEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV-----GVHTVIDC  155 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~-----~~d~vi~~  155 (269)
                      ..+++|+|+|++|.||..+++.+...|++|++++|++++. +.+++.+... ..|+.+.+++.+.+.     ++|+||++
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~  245 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-ELFRSIGGEV-FIDFTKEKDIVGAVLKATDGGAHGVINV  245 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-HHHHHTTCCE-EEETTTCSCHHHHHHHHHTSCEEEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-HHHHHcCCce-EEecCccHhHHHHHHHHhCCCCCEEEEC
Confidence            3568999999999999999999999999999999976544 3334445543 348876666655542     68999999


Q ss_pred             CC
Q 024290          156 AT  157 (269)
Q Consensus       156 ag  157 (269)
                      +|
T Consensus       246 ~g  247 (347)
T 2hcy_A          246 SV  247 (347)
T ss_dssp             SS
T ss_pred             CC
Confidence            98

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.22  E-value=1.3e-06  Score=76.69  Aligned_cols=75  Identities=19%  Similarity=0.190  Sum_probs=56.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDC  155 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~  155 (269)
                      ..+++|+|+||+|+||..+++.+...|++|+++++++++... +++.+... .+|+.+.+++.+.+     .++|+||+|
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~-~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~  221 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY-LKQIGFDA-AFNYKTVNSLEEALKKASPDGYDCYFDN  221 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCSE-EEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhcCCcE-EEecCCHHHHHHHHHHHhCCCCeEEEEC
Confidence            356899999999999999999999999999999987554333 24445432 35777745554443     368999999


Q ss_pred             CC
Q 024290          156 AT  157 (269)
Q Consensus       156 ag  157 (269)
                      +|
T Consensus       222 ~g  223 (333)
T 1v3u_A          222 VG  223 (333)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.18  E-value=6.2e-07  Score=80.15  Aligned_cols=106  Identities=19%  Similarity=0.192  Sum_probs=69.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      +.+++|+|+|+ |.||+.+++.|...|++|++++|++++.....+..+.. +.+|..+.+++.+++.++|+||++++...
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvVi~~~g~~~  241 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLLIGAVLVPG  241 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence            66789999998 99999999999999999999999765433222223333 45677777788888889999999998432


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      .....-+    ....++.++.  ...+|.+++..
T Consensus       242 ~~~~~li----~~~~l~~mk~--gg~iV~v~~~~  269 (369)
T 2eez_A          242 AKAPKLV----TRDMLSLMKE--GAVIVDVAVDQ  269 (369)
T ss_dssp             ----CCS----CHHHHTTSCT--TCEEEECC---
T ss_pred             cccchhH----HHHHHHhhcC--CCEEEEEecCC
Confidence            1100000    1233444432  24788888653

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.09  E-value=2.4e-06  Score=75.29  Aligned_cols=76  Identities=14%  Similarity=0.164  Sum_probs=55.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDC  155 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~  155 (269)
                      ..+++|+|+||+|.+|..+++.+...|++|+++++++++.....++.++.. ..|+.+.+++.+.+     .++|+||+|
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~  232 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDD-AFNYKEESDLTAALKRCFPNGIDIYFEN  232 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSE-EEETTSCSCSHHHHHHHCTTCEEEEEES
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCce-EEecCCHHHHHHHHHHHhCCCCcEEEEC
Confidence            356899999999999999999999999999999997554333222445543 24776654444333     369999999


Q ss_pred             CC
Q 024290          156 AT  157 (269)
Q Consensus       156 ag  157 (269)
                      +|
T Consensus       233 ~g  234 (345)
T 2j3h_A          233 VG  234 (345)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.08  E-value=1.2e-06  Score=75.03  Aligned_cols=73  Identities=14%  Similarity=0.203  Sum_probs=51.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCC--EEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA--TVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~--~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+++++|+|+ |++|++++..|++.|++|++..|+.++..++.+..+.  .+...|   .+++.+  .++|+||++++
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~---~~~~~~--~~~DivVn~t~  189 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALS---MDELEG--HEFDLIINATS  189 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECC---SGGGTT--CCCSEEEECCS
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEec---HHHhcc--CCCCEEEECCC
Confidence            467899999997 8899999999999999999999986544332222111  122233   333322  58999999998


Q ss_pred             C
Q 024290          158 G  158 (269)
Q Consensus       158 ~  158 (269)
                      .
T Consensus       190 ~  190 (271)
T 1nyt_A          190 S  190 (271)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.08  E-value=1.4e-06  Score=77.01  Aligned_cols=109  Identities=15%  Similarity=0.118  Sum_probs=73.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCcc---ccccCCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPAD---FLRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      |.++||.|+|++|++|+.++..++..|  .+|++++++.++...   .+.+..  +...++.-..+..++++++|+||.+
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~--~~~~~i~~t~d~~~al~dADvVvit   83 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG--FEGLNLTFTSDIKEALTDAKYIVSS   83 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC--CTTCCCEEESCHHHHHTTEEEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc--CCCCceEEcCCHHHHhCCCCEEEEc
Confidence            667899999999999999999999998  489999986543211   011100  0001222234667788999999999


Q ss_pred             CCCCC-----CccchhhcHHHHHHHHHHHHHcCCCe--EEEec
Q 024290          156 ATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQK--YVFYS  191 (269)
Q Consensus       156 ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r--~V~~S  191 (269)
                      +|...     ..+....|....+.+++.+.+...+-  ++.+|
T Consensus        84 aG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           84 GGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             CC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            98422     23456688888889999998876543  45555

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.06  E-value=3.1e-06  Score=74.95  Aligned_cols=96  Identities=15%  Similarity=0.126  Sum_probs=63.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh----cCccEEEEcCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL----VGVHTVIDCATG  158 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~----~~~d~vi~~ag~  158 (269)
                      ++|+|+||+|.||..+++.+...|+ +|+++++++++.....+..++.. .+|+.+.+..+.+.    .++|+||+|+|.
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~d~vi~~~G~  240 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDA-AINYKKDNVAEQLRESCPAGVDVYFDNVGG  240 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSE-EEETTTSCHHHHHHHHCTTCEEEEEESCCH
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCce-EEecCchHHHHHHHHhcCCCCCEEEECCCH
Confidence            8999999999999999999999999 99999997544333222245443 35776644333322    269999999982


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                                 ......++.++..  +++|.++..
T Consensus       241 -----------~~~~~~~~~l~~~--G~iv~~G~~  262 (357)
T 2zb4_A          241 -----------NISDTVISQMNEN--SHIILCGQI  262 (357)
T ss_dssp             -----------HHHHHHHHTEEEE--EEEEECCCG
T ss_pred             -----------HHHHHHHHHhccC--cEEEEECCc
Confidence                       1122233333332  488888754

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=98.04  E-value=4.6e-06  Score=76.69  Aligned_cols=74  Identities=16%  Similarity=0.355  Sum_probs=63.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag  157 (269)
                      .|+|+|.|+ |.+|++|++.|.++|++|++++++++.........++.++.||-++++.|.++ ++++|++|-+.+
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~   77 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTN   77 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence            468999995 99999999999999999999999876655544556899999999999999887 578999987664

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.04  E-value=4.4e-06  Score=72.89  Aligned_cols=78  Identities=12%  Similarity=0.159  Sum_probs=58.8

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCC---CCCccccc----cCCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPR---PAPADFLR----DWGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~---~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      ..+.+++++|+|+ |++|++++..|++.|. +|+++.|+.   ++..++.+    ..+..+...++.+.+++.+.+.++|
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD  228 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV  228 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence            3577899999996 8999999999999998 899999983   33222211    1234455567766667778888999


Q ss_pred             EEEEcCC
Q 024290          151 TVIDCAT  157 (269)
Q Consensus       151 ~vi~~ag  157 (269)
                      +|||+..
T Consensus       229 iIINaTp  235 (315)
T 3tnl_A          229 IFTNATG  235 (315)
T ss_dssp             EEEECSS
T ss_pred             EEEECcc
Confidence            9999976

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.03  E-value=3.7e-06  Score=73.78  Aligned_cols=100  Identities=14%  Similarity=0.142  Sum_probs=67.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh----cCccEEEEcC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL----VGVHTVIDCA  156 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~----~~~d~vi~~a  156 (269)
                      ..+++|+|+|++|.||..+++.+...|++|+++++++++.....++.++..+ .|..+.+..+.+.    +++|+||+|+
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~  226 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGA-IDYKNEDLAAGLKRECPKGIDVFFDNV  226 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEE-EETTTSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEE-EECCCHHHHHHHHHhcCCCceEEEECC
Confidence            3568999999999999999999999999999999976554332245565432 4666654433332    3699999999


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      |.           ......++.++..  +++|.++...
T Consensus       227 g~-----------~~~~~~~~~l~~~--G~iv~~G~~~  251 (336)
T 4b7c_A          227 GG-----------EILDTVLTRIAFK--ARIVLCGAIS  251 (336)
T ss_dssp             CH-----------HHHHHHHTTEEEE--EEEEECCCGG
T ss_pred             Cc-----------chHHHHHHHHhhC--CEEEEEeecc
Confidence            82           1112233333322  4888887654

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.02  E-value=3.6e-06  Score=74.55  Aligned_cols=74  Identities=19%  Similarity=0.213  Sum_probs=55.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH---hc--CccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---LV--GVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~---~~--~~d~vi~~a  156 (269)
                      .+++|+|+||+|.+|..+++.+...|++|++++|++++.. .+++.++.. ..|..+.+..+++   ..  ++|+||+|+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~  247 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IVLQNGAHE-VFNHREVNYIDKIKKYVGEKGIDIIIEML  247 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSE-EEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHcCCCE-EEeCCCchHHHHHHHHcCCCCcEEEEECC
Confidence            4689999999999999999999999999999999755433 334445443 2466665433333   22  699999999


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      |
T Consensus       248 G  248 (351)
T 1yb5_A          248 A  248 (351)
T ss_dssp             H
T ss_pred             C
Confidence            8

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=98.01  E-value=5.5e-06  Score=72.80  Aligned_cols=93  Identities=11%  Similarity=0.089  Sum_probs=71.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPE  161 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~~~  161 (269)
                      .++++|.|+ |.+|+.+++.|.++|+ |++++++++...  +.+.++.++.+|.+|++.+.++ ++++|.|+.+.+.   
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~---  187 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK--VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLES---  187 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH--HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSS---
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh--HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCc---
Confidence            357999996 9999999999999999 999998766544  4556899999999999999887 7889999987751   


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCC-eEEE
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQ-KYVF  189 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~-r~V~  189 (269)
                             -.....++..+++.+.+ +++-
T Consensus       188 -------d~~n~~~~~~ar~~~~~~~iia  209 (336)
T 1lnq_A          188 -------DSETIHCILGIRKIDESVRIIA  209 (336)
T ss_dssp             -------HHHHHHHHHHHHTTCTTSEEEE
T ss_pred             -------cHHHHHHHHHHHHHCCCCeEEE
Confidence                   12223455566666655 4443

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.00  E-value=4.4e-07  Score=74.35  Aligned_cols=72  Identities=13%  Similarity=0.185  Sum_probs=50.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEE-cCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVN-ADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~-~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |+|+|+||+|++|+.+++.|++.|++|++++|++++..+..+..+. .+. .|+. .+++.++++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence            4799999999999999999999999999999975543322111110 000 1232 2456677788999999985

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.99  E-value=3e-06  Score=74.15  Aligned_cols=98  Identities=14%  Similarity=0.079  Sum_probs=65.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~a  156 (269)
                      .+++|+|+||+|.||..+++.+...|++|++++|++++... +.+.+... ..|..+.+..+++.     .++|+||+|+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~-~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~~  217 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS-ALKAGAWQ-VINYREEDLVERLKEITGGKKVRVVYDSV  217 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HHHHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHcCCCE-EEECCCccHHHHHHHHhCCCCceEEEECC
Confidence            46899999999999999999999999999999997544322 22234432 24776655444433     2689999999


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      |.    ..       ....++.++..  +++|.+++..
T Consensus       218 g~----~~-------~~~~~~~l~~~--G~iv~~g~~~  242 (327)
T 1qor_A          218 GR----DT-------WERSLDCLQRR--GLMVSFGNSS  242 (327)
T ss_dssp             CG----GG-------HHHHHHTEEEE--EEEEECCCTT
T ss_pred             ch----HH-------HHHHHHHhcCC--CEEEEEecCC
Confidence            81    11       12233333332  4899888654

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.98  E-value=3.9e-06  Score=74.35  Aligned_cols=98  Identities=17%  Similarity=0.256  Sum_probs=66.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~a  156 (269)
                      .+++|+|+||+|.||..+++.+...|++|++++|++++... +++.++.. ..|..+.+..+++.     .++|+||+|+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  239 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM-AEKLGAAA-GFNYKKEDFSEATLKFTKGAGVNLILDCI  239 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHcCCcE-EEecCChHHHHHHHHHhcCCCceEEEECC
Confidence            46899999999999999999999999999999997554332 23334432 34666655443332     2689999999


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      |..    .       ....++.++..  +++|.++...
T Consensus       240 G~~----~-------~~~~~~~l~~~--G~iv~~G~~~  264 (354)
T 2j8z_A          240 GGS----Y-------WEKNVNCLALD--GRWVLYGLMG  264 (354)
T ss_dssp             CGG----G-------HHHHHHHEEEE--EEEEECCCTT
T ss_pred             Cch----H-------HHHHHHhccCC--CEEEEEeccC
Confidence            831    1       12233444332  4888887654

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.93  E-value=4.8e-05  Score=67.11  Aligned_cols=94  Identities=21%  Similarity=0.191  Sum_probs=57.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~---~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      +++|+|.||+|.+|+.+++.|+++++   +++++......... +.-.+......|+ +++.    ++++|+||.++|  
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~-~~~~g~~i~~~~~-~~~~----~~~~DvV~~a~g--   77 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR-MGFAESSLRVGDV-DSFD----FSSVGLAFFAAA--   77 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE-EEETTEEEECEEG-GGCC----GGGCSEEEECSC--
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCc-cccCCcceEEecC-CHHH----hcCCCEEEEcCC--
Confidence            36899999999999999999997754   55655422111111 1111111111122 1222    468999999987  


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                               ......+++.+.+.|+ ++|-+|+..
T Consensus        78 ---------~~~s~~~a~~~~~aG~-kvId~Sa~~  102 (340)
T 2hjs_A           78 ---------AEVSRAHAERARAAGC-SVIDLSGAL  102 (340)
T ss_dssp             ---------HHHHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             ---------cHHHHHHHHHHHHCCC-EEEEeCCCC
Confidence                     1234567777888887 577777654

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.92  E-value=1.2e-05  Score=71.14  Aligned_cols=98  Identities=17%  Similarity=0.143  Sum_probs=60.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC------CeEEEEeCCCC--CCcc-ccccCCCEEEEcCCCCCCcHHHHhcCccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG------YDVRCLVRPRP--APAD-FLRDWGATVVNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G------~~V~~~~R~~~--~~~~-~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      |+|++|+|.||||++|+.+++.|++++      .+++++.+..+  +... ........ ...++.+.+  .+.+.++|+
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~-~~~~~~~~~--~~~~~~~Dv   83 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPL-AHRVVEPTE--AAVLGGHDA   83 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGG-TTCBCEECC--HHHHTTCSE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccccccc-ceeeeccCC--HHHhcCCCE
Confidence            445799999999999999999999887      37777764322  2111 10000000 011111221  233568999


Q ss_pred             EEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          152 VIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       152 vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      ||.|++...           +..+++.+ +.|+ ++|-+|+..
T Consensus        84 Vf~alg~~~-----------s~~~~~~~-~~G~-~vIDlSa~~  113 (352)
T 2nqt_A           84 VFLALPHGH-----------SAVLAQQL-SPET-LIIDCGADF  113 (352)
T ss_dssp             EEECCTTSC-----------CHHHHHHS-CTTS-EEEECSSTT
T ss_pred             EEECCCCcc-----------hHHHHHHH-hCCC-EEEEECCCc
Confidence            999988432           24567777 7775 788888764

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.89  E-value=5.7e-06  Score=72.54  Aligned_cols=98  Identities=18%  Similarity=0.208  Sum_probs=65.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH---h--cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---L--VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~---~--~~~d~vi~~a  156 (269)
                      .+++|+|+||+|.||..+++.+...|++|++++|++++... +.+.+... ..|..+.+..+++   .  .++|+||+|+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~-~~~~g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi~~~  222 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAET-ARKLGCHH-TINYSTQDFAEVVREITGGKGVDVVYDSI  222 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHTCSE-EEETTTSCHHHHHHHHHTTCCEEEEEECS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHcCCCE-EEECCCHHHHHHHHHHhCCCCCeEEEECC
Confidence            46899999999999999999999999999999997544322 22334433 2477665543333   2  2689999999


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      |...           ....++.++..  +++|.++...
T Consensus       223 g~~~-----------~~~~~~~l~~~--G~iv~~g~~~  247 (333)
T 1wly_A          223 GKDT-----------LQKSLDCLRPR--GMCAAYGHAS  247 (333)
T ss_dssp             CTTT-----------HHHHHHTEEEE--EEEEECCCTT
T ss_pred             cHHH-----------HHHHHHhhccC--CEEEEEecCC
Confidence            8410           12233333332  4788887543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.86  E-value=2.2e-06  Score=65.98  Aligned_cols=71  Identities=20%  Similarity=0.233  Sum_probs=54.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++.+|++++..++.+..+....     ..+++.++++++|+||.+.+..
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~Divi~at~~~   91 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV-----LINDIDSLIKNNDVIITATSSK   91 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE-----ECSCHHHHHHTCSEEEECSCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE-----eecCHHHHhcCCCEEEEeCCCC
Confidence            689999995 9999999999999999999999986654443333343322     2456777788999999998754

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.85  E-value=0.00032  Score=53.53  Aligned_cols=106  Identities=17%  Similarity=0.196  Sum_probs=69.3

Q ss_pred             CCCCEEEEECCC---cHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGat---G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ...++|.|+|++   |.+|..+++.|++.|++|+.+..+.+   +.   .++       .-..++.++.+.+|+++-+..
T Consensus        12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~---~i---~G~-------~~~~s~~el~~~vDlvii~vp   78 (138)
T 1y81_A           12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYD---EI---EGL-------KCYRSVRELPKDVDVIVFVVP   78 (138)
T ss_dssp             --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS---EE---TTE-------ECBSSGGGSCTTCCEEEECSC
T ss_pred             cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCC---eE---CCe-------eecCCHHHhCCCCCEEEEEeC
Confidence            456789999987   89999999999999999777665421   11   122       122344444557899998764


Q ss_pred             CCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       158 ~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                                 -.....+++.+.+.|++.++..++..            ..++.+.+++.|+++.
T Consensus        79 -----------~~~v~~v~~~~~~~g~~~i~~~~~~~------------~~~l~~~a~~~Gi~~i  120 (138)
T 1y81_A           79 -----------PKVGLQVAKEAVEAGFKKLWFQPGAE------------SEEIRRFLEKAGVEYS  120 (138)
T ss_dssp             -----------HHHHHHHHHHHHHTTCCEEEECTTSC------------CHHHHHHHHHHTCEEE
T ss_pred             -----------HHHHHHHHHHHHHcCCCEEEEcCccH------------HHHHHHHHHHCCCEEE
Confidence                       23345566667778988777665431            1444556677888754

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.81  E-value=0.0002  Score=62.86  Aligned_cols=106  Identities=15%  Similarity=0.115  Sum_probs=68.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCcccc---cc----CCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFL---RD----WGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~---~~----~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      .+.+||.|+|| |.+|..++..|+..|+ +|++++++++......   .+    ...   ...+.-..++.++++++|+|
T Consensus         7 ~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~---~~~i~~t~d~~ea~~~aDiV   82 (331)
T 1pzg_A            7 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDT---NVSVRAEYSYEAALTGADCV   82 (331)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTC---CCCEEEECSHHHHHTTCSEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCC---CCEEEEeCCHHHHhCCCCEE
Confidence            33568999997 9999999999999998 9999999865433211   10    010   01111114566678999999


Q ss_pred             EEcCCCCC----------CccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          153 IDCATGRP----------EEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       153 i~~ag~~~----------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                      |.++|...          ..+....|..-.+.+++.+.+....-++.+
T Consensus        83 i~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~  130 (331)
T 1pzg_A           83 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIV  130 (331)
T ss_dssp             EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             EEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEE
Confidence            99997321          122334566667778888877654434433

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.80  E-value=4.6e-05  Score=67.19  Aligned_cols=97  Identities=20%  Similarity=0.291  Sum_probs=65.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH---h--cCccEEEEcCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---L--VGVHTVIDCATG  158 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~---~--~~~d~vi~~ag~  158 (269)
                      ++++|+||+|.+|..+++.+...|++|+++++++++.. .+++.++..+ .|..+.+..+.+   .  .++|+||+|+|.
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~~Ga~~~-~~~~~~~~~~~v~~~~~~~g~D~vid~~g~  243 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIA-LLKDIGAAHV-LNEKAPDFEATLREVMKAEQPRIFLDAVTG  243 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHH-HHHHHTCSEE-EETTSTTHHHHHHHHHHHHCCCEEEESSCH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCCEE-EECCcHHHHHHHHHHhcCCCCcEEEECCCC
Confidence            78999999999999999999999999999998765533 2334454432 355544332222   2  379999999982


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC  195 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~  195 (269)
                      .           .....++.++.  -+++|.++....
T Consensus       244 ~-----------~~~~~~~~l~~--~G~iv~~G~~~~  267 (349)
T 3pi7_A          244 P-----------LASAIFNAMPK--RARWIIYGRLDP  267 (349)
T ss_dssp             H-----------HHHHHHHHSCT--TCEEEECCCSCC
T ss_pred             h-----------hHHHHHhhhcC--CCEEEEEeccCC
Confidence            1           12334444433  358999886543

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.80  E-value=5.7e-05  Score=64.46  Aligned_cols=74  Identities=16%  Similarity=0.242  Sum_probs=47.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEE-eCCCCCCc-ccccc-CCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDE-GYDVRCL-VRPRPAPA-DFLRD-WGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~-~R~~~~~~-~~~~~-~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      |.|+||.|+|++|.+|+.+++.+.+. +++++++ +|+.+... +...+ .+..  . ++.-.+++.++++++|+||+++
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~--~-gv~v~~dl~~ll~~~DVVIDfT   81 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQ--T-GVALTDDIERVCAEADYLIDFT   81 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCC--C-SCBCBCCHHHHHHHCSEEEECS
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCC--C-CceecCCHHHHhcCCCEEEEcC
Confidence            66789999999999999999999875 5788775 55433211 10000 0111  0 3333456777777889999886


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      .
T Consensus        82 ~   82 (272)
T 4f3y_A           82 L   82 (272)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.78  E-value=0.0001  Score=64.48  Aligned_cols=102  Identities=11%  Similarity=0.142  Sum_probs=69.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCcc---cccc------CCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRD------WGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~---~~~~------~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      ..+||.|+|+ |++|..++..|+..|.  +|+++++++++...   .+.+      .++.+...|       .+.++++|
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aD   75 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDAD   75 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCC
Confidence            4578999996 9999999999999986  89999986543211   0111      133433322       24678999


Q ss_pred             EEEEcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          151 TVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       151 ~vi~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      +||.++|...     ..+....|....+.+++.+.+.... .++.+|
T Consensus        76 vVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           76 IVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence            9999998422     1234567777888888888887654 455554

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.76  E-value=2.6e-05  Score=69.34  Aligned_cols=99  Identities=20%  Similarity=0.236  Sum_probs=69.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~  161 (269)
                      .+.+|+|+|+ |.+|..+++.+...|++|+++++++++.....++.++..+ .|..+.+.+.++..++|+||+++|....
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~D~vid~~g~~~~  264 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSF-LVSRDQEQMQAAAGTLDGIIDTVSAVHP  264 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEE-EETTCHHHHHHTTTCEEEEEECCSSCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceE-EeccCHHHHHHhhCCCCEEEECCCcHHH
Confidence            5789999996 9999999999999999999999976554333324565432 4666666666666789999999984321


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      -          ...++.++..  +++|.+++..
T Consensus       265 ~----------~~~~~~l~~~--G~iv~~g~~~  285 (366)
T 1yqd_A          265 L----------LPLFGLLKSH--GKLILVGAPE  285 (366)
T ss_dssp             S----------HHHHHHEEEE--EEEEECCCCS
T ss_pred             H----------HHHHHHHhcC--CEEEEEccCC
Confidence            0          1234444333  4888887643

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.75  E-value=1.9e-05  Score=70.15  Aligned_cols=97  Identities=15%  Similarity=0.201  Sum_probs=65.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~a  156 (269)
                      .+++|+|+||+|.+|..+++.+...|++|+++++++++.. .+++.++..+ .|..+.+ +.+.+     .++|+||+|+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~-~~~~~Ga~~~-~~~~~~~-~~~~~~~~~~~g~D~vid~~  239 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSA-FLKSLGCDRP-INYKTEP-VGTVLKQEYPEGVDVVYESV  239 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEE-EETTTSC-HHHHHHHHCTTCEEEEEECS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHH-HHHHcCCcEE-EecCChh-HHHHHHHhcCCCCCEEEECC
Confidence            4679999999999999999999999999999999754332 2334555433 3554433 33322     3689999999


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      |.           ......++.++..  +++|.++...
T Consensus       240 g~-----------~~~~~~~~~l~~~--G~iv~~g~~~  264 (362)
T 2c0c_A          240 GG-----------AMFDLAVDALATK--GRLIVIGFIS  264 (362)
T ss_dssp             CT-----------HHHHHHHHHEEEE--EEEEECCCGG
T ss_pred             CH-----------HHHHHHHHHHhcC--CEEEEEeCCC
Confidence            82           1123344444443  4899888654

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.75  E-value=2.2e-05  Score=68.40  Aligned_cols=103  Identities=17%  Similarity=0.184  Sum_probs=67.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccc---ccc------CCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF---LRD------WGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~---~~~------~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      ++||.|+|+ |.+|..++..|+..|+ +|+++++++++....   +.+      ...++..     ..+. +.++++|+|
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-----t~d~-~a~~~aD~V   74 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-----TNNY-ADTANSDVI   74 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-----ESCG-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-----CCCH-HHHCCCCEE
Confidence            368999998 9999999999999996 988888876433211   111      0111211     0223 457899999


Q ss_pred             EEcCCCCCC-----ccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          153 IDCATGRPE-----EPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       153 i~~ag~~~~-----~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      |.++|....     .+....|....+.+++.+.+.....+|.+.|
T Consensus        75 i~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           75 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             EECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            999984321     2334566777778888888876555555443

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.74  E-value=4.4e-06  Score=71.90  Aligned_cols=74  Identities=16%  Similarity=0.263  Sum_probs=55.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccC-----CCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDW-----GATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~-----~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      .+.+++++|+|+ |++|++++..|++.|. +|+++.|+.++..++.+..     ++.+...+   .+++.+.+.++|+||
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~---~~~l~~~l~~~DiVI  199 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVIAAADGVV  199 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEEC---STTHHHHHHHSSEEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcC---HHHHHHHHhcCCEEE
Confidence            467899999997 9999999999999998 7999999866543322211     23333333   356777788899999


Q ss_pred             EcCC
Q 024290          154 DCAT  157 (269)
Q Consensus       154 ~~ag  157 (269)
                      |+..
T Consensus       200 naTp  203 (283)
T 3jyo_A          200 NATP  203 (283)
T ss_dssp             ECSS
T ss_pred             ECCC
Confidence            9986

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.74  E-value=2.4e-05  Score=68.53  Aligned_cols=99  Identities=14%  Similarity=0.181  Sum_probs=66.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH---h--cCccEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---L--VGVHTVIDC  155 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~---~--~~~d~vi~~  155 (269)
                      ..+++|+|+||+|.+|..+++.+...|++|+++++++++.. .+++.+...+ .|..+.+..+.+   .  .++|+||+|
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~~-~~~~~~~~~~~~~~~~~~~g~D~vid~  224 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IAKEYGAEYL-INASKEDILRQVLKFTNGKGVDASFDS  224 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCcEE-EeCCCchHHHHHHHHhCCCCceEEEEC
Confidence            35689999999999999999999999999999999755433 3444554432 355554433333   2  368999999


Q ss_pred             CCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       156 ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      +|..           .....++.++..  +++|.++...
T Consensus       225 ~g~~-----------~~~~~~~~l~~~--G~iv~~G~~~  250 (334)
T 3qwb_A          225 VGKD-----------TFEISLAALKRK--GVFVSFGNAS  250 (334)
T ss_dssp             CGGG-----------GHHHHHHHEEEE--EEEEECCCTT
T ss_pred             CChH-----------HHHHHHHHhccC--CEEEEEcCCC
Confidence            9831           112334444333  4888887643

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.74  E-value=1.7e-05  Score=68.59  Aligned_cols=76  Identities=17%  Similarity=0.174  Sum_probs=54.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+.+++++|+|+ |++|+.++..|++.|+ +|++..|+.++..++.+..+...  .++.+.+++.+.+.++|+||++++.
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~--~~~~~~~~~~~~~~~aDivIn~t~~  214 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR--SAYFSLAEAETRLAEYDIIINTTSV  214 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS--CCEECHHHHHHTGGGCSEEEECSCT
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc--CceeeHHHHHhhhccCCEEEECCCC
Confidence            467899999996 8899999999999997 99999998655443332222100  0111223566677889999999974

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.72  E-value=5.5e-05  Score=66.22  Aligned_cols=104  Identities=11%  Similarity=0.124  Sum_probs=64.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCcc---cccc-----CCCEEEEcCCCCCCcHHHHhcCc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRD-----WGATVVNADLSKPETIPATLVGV  149 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~---~~~~-----~~~~~i~~Dl~d~~~l~~~~~~~  149 (269)
                      ...++||.|+|+ |.+|..++..|+..|.  +++++++++++...   .+.+     .++.+...|       .+.++++
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~a   77 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDA   77 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTC
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCC
Confidence            356689999996 9999999999999886  89999986542210   0111     133333222       3457899


Q ss_pred             cEEEEcCCCC-----CCccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          150 HTVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       150 d~vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      |+||.++|..     ...+.++.|..-.+.+++.+.+.... .++.+|
T Consensus        78 DiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           78 DLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             SEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             CEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            9999999842     23355667777788888888877644 444444

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.72  E-value=1.9e-05  Score=69.89  Aligned_cols=75  Identities=17%  Similarity=0.185  Sum_probs=54.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh----cCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL----VGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~----~~~d~vi~~ag  157 (269)
                      .+++|+|+||+|.+|..+++.+...|++|+++++++++.. .+++.++..+ .|..+.+..+.+.    .++|+||+|+|
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~~-~~~~~~~~~~~~~~~~~~g~Dvvid~~g  244 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCE-ACERLGAKRG-INYRSEDFAAVIKAETGQGVDIILDMIG  244 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHTCSEE-EETTTSCHHHHHHHHHSSCEEEEEESCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhcCCCEE-EeCCchHHHHHHHHHhCCCceEEEECCC
Confidence            5689999999999999999999999999999999765433 2333444432 4555554333332    36999999998


Q ss_pred             C
Q 024290          158 G  158 (269)
Q Consensus       158 ~  158 (269)
                      .
T Consensus       245 ~  245 (353)
T 4dup_A          245 A  245 (353)
T ss_dssp             G
T ss_pred             H
Confidence            3

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.71  E-value=1.7e-05  Score=69.85  Aligned_cols=98  Identities=13%  Similarity=0.121  Sum_probs=66.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCc---HHHHh--cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPET---IPATL--VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~---l~~~~--~~~d~vi~~a  156 (269)
                      .+++|+|+|++|.+|..+++.+...|++|+++++++++... +++.++..+ .|..+.+.   +.++.  .++|+||+++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~-~~~~ga~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~~~  243 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRR-AKALGADET-VNYTHPDWPKEVRRLTGGKGADKVVDHT  243 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHTCSEE-EETTSTTHHHHHHHHTTTTCEEEEEESS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhcCCCEE-EcCCcccHHHHHHHHhCCCCceEEEECC
Confidence            46899999999999999999999999999999997554332 233344432 47666542   22333  2689999999


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      |..    .       ....++.++..  +++|.++...
T Consensus       244 g~~----~-------~~~~~~~l~~~--G~~v~~g~~~  268 (343)
T 2eih_A          244 GAL----Y-------FEGVIKATANG--GRIAIAGASS  268 (343)
T ss_dssp             CSS----S-------HHHHHHHEEEE--EEEEESSCCC
T ss_pred             CHH----H-------HHHHHHhhccC--CEEEEEecCC
Confidence            821    1       12344444443  4899888654

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.70  E-value=4.8e-05  Score=62.56  Aligned_cols=67  Identities=16%  Similarity=0.223  Sum_probs=50.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+++|.|+| +|.+|+.+++.|.+.|++|++.+|++++..+ +.+.++...        ++.++++++|+||.+...
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~-~~~~g~~~~--------~~~~~~~~~DvVi~av~~   93 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTAR-LFPSAAQVT--------FQEEAVSSPEVIFVAVFR   93 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHH-HSBTTSEEE--------EHHHHTTSCSEEEECSCG
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHcCCcee--------cHHHHHhCCCEEEECCCh
Confidence            346899999 7999999999999999999999997554333 222344432        456677889999998863

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.70  E-value=2.7e-05  Score=69.21  Aligned_cols=72  Identities=17%  Similarity=0.199  Sum_probs=53.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC---CCCccccccCCCEEEEcCCCCCCcHHHH---hcCccEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR---PAPADFLRDWGATVVNADLSKPETIPAT---LVGVHTVID  154 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~---~~~~~~~~~~~~~~i~~Dl~d~~~l~~~---~~~~d~vi~  154 (269)
                      +.+++|+|+|+ |.+|..+++.+...|++|+++++++   ++. +.+++.++..+  | .+ +..+++   -.++|+||+
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~~~ga~~v--~-~~-~~~~~~~~~~~~~d~vid  252 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIEETKTNYY--N-SS-NGYDKLKDSVGKFDVIID  252 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHHHHTCEEE--E-CT-TCSHHHHHHHCCEEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHHHhCCcee--c-hH-HHHHHHHHhCCCCCEEEE
Confidence            34889999999 9999999999999999999999976   433 33444567666  6 54 322222   157999999


Q ss_pred             cCCC
Q 024290          155 CATG  158 (269)
Q Consensus       155 ~ag~  158 (269)
                      ++|.
T Consensus       253 ~~g~  256 (366)
T 2cdc_A          253 ATGA  256 (366)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9984

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.69  E-value=1.7e-05  Score=67.82  Aligned_cols=74  Identities=14%  Similarity=0.252  Sum_probs=50.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCC--EEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA--TVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~--~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+++++|+|+ |++|++++..|++.|++|++..|+.++..++.+..+.  .+...|+   +++.+  .++|+||++++
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~---~~~~~--~~~DivIn~t~  189 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM---DSIPL--QTYDLVINATS  189 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG---GGCCC--SCCSEEEECCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH---HHhcc--CCCCEEEECCC
Confidence            467889999997 8899999999999999999999986544333221110  1212233   11111  37999999998


Q ss_pred             CC
Q 024290          158 GR  159 (269)
Q Consensus       158 ~~  159 (269)
                      ..
T Consensus       190 ~~  191 (272)
T 1p77_A          190 AG  191 (272)
T ss_dssp             C-
T ss_pred             CC
Confidence            43

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.69  E-value=0.00049  Score=61.23  Aligned_cols=92  Identities=14%  Similarity=0.160  Sum_probs=53.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHH-HCCC---eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRAL-DEGY---DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll-~~G~---~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      |++|.|.||+|++|+.+++.|+ ++++   +++.+..+. .........+......|..++   .. ++++|+||.|+| 
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v~~~~g~~i~~~~~~~~---~~-~~~~DvVf~a~g-   74 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAAPSFGGTTGTLQDAFDL---EA-LKALDIIVTCQG-   74 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCGGGTCCCBCEETTCH---HH-HHTCSEEEECSC-
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCccccCCCceEEEecCCh---HH-hcCCCEEEECCC-
Confidence            3689999999999999999544 4543   555555532 211110000111112223232   22 468999999987 


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                                ...+......+.+.|++++|.-
T Consensus        75 ----------~~~s~~~a~~~~~~G~k~vVID   96 (367)
T 1t4b_A           75 ----------GDYTNEIYPKLRESGWQGYWID   96 (367)
T ss_dssp             ----------HHHHHHHHHHHHHTTCCCEEEE
T ss_pred             ----------chhHHHHHHHHHHCCCCEEEEc
Confidence                      2344567777788888544443

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.68  E-value=9.6e-06  Score=69.83  Aligned_cols=74  Identities=16%  Similarity=0.225  Sum_probs=50.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCC-----EEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA-----TVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~-----~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      .+.+++++|+|+ |++|++++..|++.| +|++.+|+.++..+..++.+.     ..+.+|+.+.   .+.+.++|+||+
T Consensus       125 ~l~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~---~~~~~~~DilVn  199 (287)
T 1nvt_A          125 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL---DVDLDGVDIIIN  199 (287)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT---TCCCTTCCEEEE
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH---HHhhCCCCEEEE
Confidence            467899999998 499999999999999 999999976543332211100     0012233332   344568999999


Q ss_pred             cCCC
Q 024290          155 CATG  158 (269)
Q Consensus       155 ~ag~  158 (269)
                      |++.
T Consensus       200 ~ag~  203 (287)
T 1nvt_A          200 ATPI  203 (287)
T ss_dssp             CSCT
T ss_pred             CCCC
Confidence            9984

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.68  E-value=2.7e-05  Score=68.20  Aligned_cols=103  Identities=16%  Similarity=0.173  Sum_probs=70.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCcc---cccc------CCCEEEE-cCCCCCCcHHHHhcCc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD---FLRD------WGATVVN-ADLSKPETIPATLVGV  149 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~---~~~~------~~~~~i~-~Dl~d~~~l~~~~~~~  149 (269)
                      |+++||.|+|+ |.+|..++..|+..|+ +|+++++++++...   .+.+      ....+.. .|      . ++++++
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d------~-~a~~~a   76 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND------Y-AAIEGA   76 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS------G-GGGTTC
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC------H-HHHCCC
Confidence            66789999997 9999999999999998 99999998754321   1111      1222221 22      2 567899


Q ss_pred             cEEEEcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          150 HTVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       150 d~vi~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      |+||.++|...     ..+.+..|..-.+.+++.+.+.... .++.+|
T Consensus        77 DiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           77 DVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             SEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence            99999998422     2345567777788888888877644 555555

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.67  E-value=3e-05  Score=68.37  Aligned_cols=75  Identities=29%  Similarity=0.312  Sum_probs=54.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCc---HHHHh--cCccEEEEc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPET---IPATL--VGVHTVIDC  155 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~---l~~~~--~~~d~vi~~  155 (269)
                      .+++|+|+|++|.||..+++.+... |++|+++++++++... +++.+...+ .|..+.+.   +.++.  .++|+||++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~-~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~  247 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA-AKRAGADYV-INASMQDPLAEIRRITESKGVDAVIDL  247 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH-HHHHTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHH-HHHhCCCEE-ecCCCccHHHHHHHHhcCCCceEEEEC
Confidence            5689999999999999999999998 9999999987544322 233344332 46666544   34444  369999999


Q ss_pred             CCC
Q 024290          156 ATG  158 (269)
Q Consensus       156 ag~  158 (269)
                      +|.
T Consensus       248 ~g~  250 (347)
T 1jvb_A          248 NNS  250 (347)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            983

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.67  E-value=0.0002  Score=63.38  Aligned_cols=96  Identities=16%  Similarity=0.142  Sum_probs=57.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCcccccc-CCCE------EEEcCCC----CCCcHHHHhc-Cc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRD-WGAT------VVNADLS----KPETIPATLV-GV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~-~~~~------~i~~Dl~----d~~~l~~~~~-~~  149 (269)
                      +++|.|.||+|++|+.+++.|.+.+ .+|+++.+++....+.+.+ .+..      .-..|+.    |+++   +++ ++
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~   84 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKH---EEFEDV   84 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTS---GGGTTC
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHH---HhcCCC
Confidence            4689999999999999999998765 6888886532211111100 0000      0001111    2222   335 89


Q ss_pred             cEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          150 HTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       150 d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      |+||.+.+           ......+++.+.+.|+ ++|-.|+.
T Consensus        85 DvV~~atp-----------~~~~~~~a~~~~~aG~-~VId~s~~  116 (354)
T 1ys4_A           85 DIVFSALP-----------SDLAKKFEPEFAKEGK-LIFSNASA  116 (354)
T ss_dssp             CEEEECCC-----------HHHHHHHHHHHHHTTC-EEEECCST
T ss_pred             CEEEECCC-----------chHHHHHHHHHHHCCC-EEEECCch
Confidence            99999987           1233456667777776 57766664

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.67  E-value=0.00014  Score=63.07  Aligned_cols=81  Identities=22%  Similarity=0.159  Sum_probs=57.8

Q ss_pred             CCCCE-EEEE-CCC-----------------cHHHHHHHHHHHHCCCeEEEEeCCCCCCcc--ccc--------------
Q 024290           81 VRPTS-ILVV-GAT-----------------GTLGRQIVRRALDEGYDVRCLVRPRPAPAD--FLR--------------  125 (269)
Q Consensus        81 ~~~~~-vlVt-Gat-----------------G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~--~~~--------------  125 (269)
                      +.+++ |||| |+|                 |..|.+++++++++|++|+++.+...-...  .+.              
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            45667 8888 667                 999999999999999999999986432110  000              


Q ss_pred             cCCCEEEEcCCCCCCcHHHHh-------------------------------------cCccEEEEcCCCCCC
Q 024290          126 DWGATVVNADLSKPETIPATL-------------------------------------VGVHTVIDCATGRPE  161 (269)
Q Consensus       126 ~~~~~~i~~Dl~d~~~l~~~~-------------------------------------~~~d~vi~~ag~~~~  161 (269)
                      ..++..+.+|+...+++.+++                                     .+.|++|.+|+..++
T Consensus       114 ~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf  186 (313)
T 1p9o_A          114 LSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDF  186 (313)
T ss_dssp             CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSE
T ss_pred             ccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhc
Confidence            123456777887777665554                                     468999999996553

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.65  E-value=3.4e-05  Score=67.13  Aligned_cols=78  Identities=18%  Similarity=0.309  Sum_probs=55.0

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCC---CCCccccc----cCCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPR---PAPADFLR----DWGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~---~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      ..+.+++++|+|+ |++|++++..|.+.|. +|+++.|+.   ++..++.+    ..+..+...++.+.+.+.+.+.++|
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~D  222 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASAD  222 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCS
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCce
Confidence            3467899999996 9999999999999998 899999983   33322211    1233444445544333456677899


Q ss_pred             EEEEcCC
Q 024290          151 TVIDCAT  157 (269)
Q Consensus       151 ~vi~~ag  157 (269)
                      +|||+..
T Consensus       223 iIINaTp  229 (312)
T 3t4e_A          223 ILTNGTK  229 (312)
T ss_dssp             EEEECSS
T ss_pred             EEEECCc
Confidence            9999876

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.65  E-value=9.8e-05  Score=65.22  Aligned_cols=94  Identities=20%  Similarity=0.154  Sum_probs=59.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCcccccc----CCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRD----WGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~----~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      +++|.|.||+|++|+.+++.|.+++ .+++++.+..+...+....    .+..  ..++.+.   .+ +.++|+||.+++
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~--~~~~~~~---~~-~~~vDvV~~a~g   77 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRT--NLKFVPP---EK-LEPADILVLALP   77 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTC--CCBCBCG---GG-CCCCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcc--cccccch---hH-hcCCCEEEEcCC
Confidence            5789999999999999999999876 4888877643322211100    0100  1112222   22 478999999987


Q ss_pred             CCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       158 ~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      ..           ....+++.+.++|+ ++|-+|+..
T Consensus        78 ~~-----------~s~~~a~~~~~aG~-~VId~Sa~~  102 (345)
T 2ozp_A           78 HG-----------VFAREFDRYSALAP-VLVDLSADF  102 (345)
T ss_dssp             TT-----------HHHHTHHHHHTTCS-EEEECSSTT
T ss_pred             cH-----------HHHHHHHHHHHCCC-EEEEcCccc
Confidence            32           23456666677786 688888753

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.64  E-value=0.00016  Score=64.43  Aligned_cols=72  Identities=17%  Similarity=0.290  Sum_probs=57.6

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      ..+.+++|+|+|+ |.+|+.+++.+.+.|++|++++.++.......   .-.++..|+.|.+.+.++.+.+|+|..
T Consensus         8 ~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~---ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A            8 KLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV---AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG---SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhh---CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            3466789999995 89999999999999999999988655433222   235778899999999998888998854

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.64  E-value=1.6e-05  Score=74.19  Aligned_cols=74  Identities=16%  Similarity=0.281  Sum_probs=46.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+.+++++|+|| |++|++++..|++.|++|+++.|+.++..+.....+...+.  +.|.+.+  ....+|+||||+|.
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~~~--~~dl~~~--~~~~~DilVN~agv  434 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALS--LTDLDNY--HPEDGMVLANTTSM  434 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-CEE--TTTTTTC----CCSEEEEECSST
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceee--HHHhhhc--cccCceEEEECCCC
Confidence            356789999998 79999999999999999999999865544333322322222  2222111  12458999999984

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.64  E-value=3.4e-05  Score=66.61  Aligned_cols=98  Identities=18%  Similarity=0.153  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      ..+++|+|+|++|.+|..+++.+...|++|+++++++++... +++.++..+ .|..+.+++.+.++++|+||+ +|.. 
T Consensus       124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~ga~~~-~~~~~~~~~~~~~~~~d~vid-~g~~-  199 (302)
T 1iz0_A          124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-PLALGAEEA-ATYAEVPERAKAWGGLDLVLE-VRGK-  199 (302)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-HHHTTCSEE-EEGGGHHHHHHHTTSEEEEEE-CSCT-
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhcCCCEE-EECCcchhHHHHhcCceEEEE-CCHH-
Confidence            356899999999999999999999999999999997655433 344555433 354431334444578999999 8841 


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                         .       ....++.++..  +++|.++...
T Consensus       200 ---~-------~~~~~~~l~~~--G~~v~~g~~~  221 (302)
T 1iz0_A          200 ---E-------VEESLGLLAHG--GRLVYIGAAE  221 (302)
T ss_dssp             ---T-------HHHHHTTEEEE--EEEEEC----
T ss_pred             ---H-------HHHHHHhhccC--CEEEEEeCCC
Confidence               1       12233333332  4888877543

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.63  E-value=0.00063  Score=57.05  Aligned_cols=97  Identities=16%  Similarity=0.202  Sum_probs=64.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~ag  157 (269)
                      +||+|+|++|.+|+.+++.+.+. |+++++.....+...+.+. .+.. +..|++.++.+.+.+     .++++|+-..|
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigTTG   78 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-GNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   78 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-TTCC-EEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-cCCc-EEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence            47999999999999999999876 8999877655444443332 2334 567899988876554     37888887776


Q ss_pred             CCCCccchhhcHHHHHHHHHHHHHc-CCCeEEEecc
Q 024290          158 GRPEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSI  192 (269)
Q Consensus       158 ~~~~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS  192 (269)
                      ...         +....+.+++++. ++ .+++.+.
T Consensus        79 ~~~---------e~~~~l~~aa~~~~~~-~vv~a~N  104 (245)
T 1p9l_A           79 FTA---------ERFQQVESWLVAKPNT-SVLIAPN  104 (245)
T ss_dssp             CCH---------HHHHHHHHHHHTSTTC-EEEECSC
T ss_pred             CCH---------HHHHHHHHHHHhCCCC-CEEEECC
Confidence            321         1113455555544 43 5566554

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.63  E-value=2.5e-05  Score=68.21  Aligned_cols=99  Identities=17%  Similarity=0.098  Sum_probs=65.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDC  155 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~  155 (269)
                      ..+++|+|+||+|.+|..+++.+...|++|+++++++++.. .+++.++..+ .|..+.+..+.+.     .++|+||+|
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~Ga~~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~  216 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA-HAKALGAWET-IDYSHEDVAKRVLELTDGKKCPVVYDG  216 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHHHTCSEE-EETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCCEE-EeCCCccHHHHHHHHhCCCCceEEEEC
Confidence            34689999999999999999999999999999998755433 2333454332 3555544333332     269999999


Q ss_pred             CCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       156 ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      +|..           .....++.++..  +++|.++...
T Consensus       217 ~g~~-----------~~~~~~~~l~~~--G~iv~~g~~~  242 (325)
T 3jyn_A          217 VGQD-----------TWLTSLDSVAPR--GLVVSFGNAS  242 (325)
T ss_dssp             SCGG-----------GHHHHHTTEEEE--EEEEECCCTT
T ss_pred             CChH-----------HHHHHHHHhcCC--CEEEEEecCC
Confidence            9831           111223333322  4888887654

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.62  E-value=8e-05  Score=65.39  Aligned_cols=99  Identities=16%  Similarity=0.234  Sum_probs=65.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDC  155 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~  155 (269)
                      ..+++|+|+|++|.+|..+++.+...|++|+++++++++... +.+.++..+ .|..+.+..+.+.     .++|+||+|
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~lga~~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~  220 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE-LLRLGAAYV-IDTSTAPLYETVMELTNGIGADAAIDS  220 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHH-HHHHTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHhCCCcEE-EeCCcccHHHHHHHHhCCCCCcEEEEC
Confidence            356899999999999999999999999999999998765432 334455433 3555544333332     269999999


Q ss_pred             CCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       156 ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      +|..           .....++.++..  +++|.++...
T Consensus       221 ~g~~-----------~~~~~~~~l~~~--G~iv~~G~~~  246 (340)
T 3gms_A          221 IGGP-----------DGNELAFSLRPN--GHFLTIGLLS  246 (340)
T ss_dssp             SCHH-----------HHHHHHHTEEEE--EEEEECCCTT
T ss_pred             CCCh-----------hHHHHHHHhcCC--CEEEEEeecC
Confidence            9821           112233333222  4889887654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.60  E-value=6e-05  Score=66.30  Aligned_cols=75  Identities=28%  Similarity=0.420  Sum_probs=52.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCC---cHHHHhc--CccEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE---TIPATLV--GVHTVIDC  155 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~---~l~~~~~--~~d~vi~~  155 (269)
                      ..+++|+|+||+|.+|..+++.+...|++|+++++++++.. .+++.++..+ .|.. .+   .+.+...  ++|+||+|
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~v-~~~~-~~~~~~v~~~~~~~g~Dvvid~  234 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATE-FVKSVGADIV-LPLE-EGWAKAVREATGGAGVDMVVDP  234 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHTCSEE-EESS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhcCCcEE-ecCc-hhHHHHHHHHhCCCCceEEEEC
Confidence            35689999999999999999999999999999999765542 3333454433 2433 22   2222332  69999999


Q ss_pred             CCC
Q 024290          156 ATG  158 (269)
Q Consensus       156 ag~  158 (269)
                      +|.
T Consensus       235 ~g~  237 (342)
T 4eye_A          235 IGG  237 (342)
T ss_dssp             CC-
T ss_pred             Cch
Confidence            984

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.59  E-value=0.00058  Score=64.10  Aligned_cols=68  Identities=15%  Similarity=0.153  Sum_probs=59.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag  157 (269)
                      ++++|.|+ |.+|+.+++.|.+.|++|++++.+++...+.     ..++.+|.+|++.++++ ++++|.+|-+.+
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~-----~~~i~gD~t~~~~L~~agi~~ad~vi~~~~  417 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCND-----HVVVYGDATVGQTLRQAGIDRASGIIVTTN  417 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCS-----SCEEESCSSSSTHHHHHTTTSCSEEEECCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhc-----CCEEEeCCCCHHHHHhcCccccCEEEEECC
Confidence            78999996 9999999999999999999999987765542     27899999999999877 478999998876

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.58  E-value=3.7e-05  Score=68.28  Aligned_cols=97  Identities=21%  Similarity=0.225  Sum_probs=59.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCcccc---cc-CCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFL---RD-WGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~---~~-~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      |++++|.|.||+|.+|+.+++.|.++. .+++++.+..+...+..   .. .+..  ..|+.-.+  .+.++++|+||.|
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v--~~dl~~~~--~~~~~~vDvVf~a   89 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK--LPTLVSVK--DADFSTVDAVFCC   89 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC--CCCCBCGG--GCCGGGCSEEEEC
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc--cccceecc--hhHhcCCCEEEEc
Confidence            445799999999999999999999876 58888876433221111   00 1110  12332222  3345689999999


Q ss_pred             CCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       156 ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      ++...           +......+ +.|+ ++|-.|+..
T Consensus        90 tp~~~-----------s~~~a~~~-~aG~-~VId~sa~~  115 (359)
T 1xyg_A           90 LPHGT-----------TQEIIKEL-PTAL-KIVDLSADF  115 (359)
T ss_dssp             CCTTT-----------HHHHHHTS-CTTC-EEEECSSTT
T ss_pred             CCchh-----------HHHHHHHH-hCCC-EEEECCccc
Confidence            87321           23455566 6675 677777754

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.57  E-value=0.00028  Score=61.63  Aligned_cols=104  Identities=17%  Similarity=0.113  Sum_probs=70.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCcc---cccc------CCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD---FLRD------WGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~---~~~~------~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      |.++||.|+|+ |.+|..++..|+..|. +|+++++++++...   .+.+      ....+...+  |    .++++++|
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d----~~a~~~aD   75 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--D----YKDLENSD   75 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--C----GGGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--C----HHHHCCCC
Confidence            55689999995 9999999999999988 99999998654321   1111      122222111  1    25778999


Q ss_pred             EEEEcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          151 TVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       151 ~vi~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      +||.++|...     ..+.+..|....+.+++.+.+.... .++.+|
T Consensus        76 vVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           76 VVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9999998432     1234556777788888888877644 555554

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.57  E-value=1.3e-05  Score=71.25  Aligned_cols=74  Identities=15%  Similarity=0.228  Sum_probs=53.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      +.+++|+|+|+ |.+|+.+++.|...|.+|++++|++++.......  ..+..+   ..+.+++.+.+.++|+||++++.
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~DvVI~~~~~  240 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGAVLV  240 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEECCCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEee---eCCHHHHHHHHcCCCEEEECCCc
Confidence            45689999998 9999999999999999999999986543322111  012122   12344666777899999999975

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.57  E-value=2.3e-05  Score=70.07  Aligned_cols=77  Identities=21%  Similarity=0.241  Sum_probs=56.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+.+++|+|+|+ |.||+.+++.+...|++|++.+|++++.....+..+..+ ..+..+.+++.+++.++|+||++++.
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~-~~~~~~~~~l~~~l~~aDvVi~~~~~  241 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRI-HTRYSSAYELEGAVKRADLVIGAVLV  241 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSS-EEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCee-EeccCCHHHHHHHHcCCCEEEECCCc
Confidence            467899999997 999999999999999999999997654332211123221 12333445677778889999999874

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.57  E-value=5.7e-05  Score=66.55  Aligned_cols=98  Identities=16%  Similarity=0.175  Sum_probs=64.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH---h--cCccEEEEc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---L--VGVHTVIDC  155 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~---~--~~~d~vi~~  155 (269)
                      .+.+|+|+|+ |.+|..+++.+...|+ +|+++++++++.. .+++.++..+ .|..+.+..+++   .  .++|+||++
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~-~~~~~Ga~~~-~~~~~~~~~~~v~~~~~g~g~D~vid~  243 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRE-LAKKVGADYV-INPFEEDVVKEVMDITDGNGVDVFLEF  243 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHH-HHHHHTCSEE-ECTTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHhCCCEE-ECCCCcCHHHHHHHHcCCCCCCEEEEC
Confidence            6789999999 9999999999999999 9999999754332 2334455433 366554322222   2  268999999


Q ss_pred             CCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       156 ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      +|..          ......++.++..  +++|.+++..
T Consensus       244 ~g~~----------~~~~~~~~~l~~~--G~iv~~g~~~  270 (348)
T 2d8a_A          244 SGAP----------KALEQGLQAVTPA--GRVSLLGLYP  270 (348)
T ss_dssp             SCCH----------HHHHHHHHHEEEE--EEEEECCCCS
T ss_pred             CCCH----------HHHHHHHHHHhcC--CEEEEEccCC
Confidence            9831          1223344444333  4888887654

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=97.57  E-value=0.0011  Score=50.76  Aligned_cols=104  Identities=16%  Similarity=0.107  Sum_probs=67.9

Q ss_pred             CCEEEEECCC---cHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           83 PTSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGat---G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      .++|.|+|++   |.+|..+++.|.+.|++|+.+.  +.. .+.   .++       .-..++.++.+.+|+++-+..  
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vn--p~~-~~i---~G~-------~~y~sl~~l~~~vDlvvi~vp--   86 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVN--PKY-EEV---LGR-------KCYPSVLDIPDKIEVVDLFVK--   86 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC--TTC-SEE---TTE-------ECBSSGGGCSSCCSEEEECSC--
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEEC--CCC-CeE---CCe-------eccCCHHHcCCCCCEEEEEeC--
Confidence            5789999998   8999999999999999866553  322 111   121       112333444457899988764  


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                               -.....+++.|.+.|++.+++.++..            -..+.+.+++.|+++.
T Consensus        87 ---------~~~~~~vv~~~~~~gi~~i~~~~g~~------------~~~l~~~a~~~Gi~vv  128 (144)
T 2d59_A           87 ---------PKLTMEYVEQAIKKGAKVVWFQYNTY------------NREASKKADEAGLIIV  128 (144)
T ss_dssp             ---------HHHHHHHHHHHHHHTCSEEEECTTCC------------CHHHHHHHHHTTCEEE
T ss_pred             ---------HHHHHHHHHHHHHcCCCEEEECCCch------------HHHHHHHHHHcCCEEE
Confidence                     24456677888888998776543221            1445566778888754

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.57  E-value=0.00087  Score=59.49  Aligned_cols=93  Identities=20%  Similarity=0.236  Sum_probs=56.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~---~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      +++|.|.||||++|..|++.|.++++   ++..+......... +...+.....-++. ++    .++++|+||.|++  
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~-~~~~~~~~~~~~~~-~~----~~~~~Dvvf~a~~--   73 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKS-LKFKDQDITIEETT-ET----AFEGVDIALFSAG--   73 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCE-EEETTEEEEEEECC-TT----TTTTCSEEEECSC--
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCc-ceecCCCceEeeCC-HH----HhcCCCEEEECCC--
Confidence            46899999999999999999888765   44444432222111 11112122222222 12    2468999999987  


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                               -.........+.+.|+ ++|=+|+.
T Consensus        74 ---------~~~s~~~a~~~~~~G~-~vIDlSa~   97 (366)
T 3pwk_A           74 ---------SSTSAKYAPYAVKAGV-VVVDNTSY   97 (366)
T ss_dssp             ---------HHHHHHHHHHHHHTTC-EEEECSST
T ss_pred             ---------hHhHHHHHHHHHHCCC-EEEEcCCc
Confidence                     2233556666677786 67777764

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.57  E-value=0.00039  Score=61.11  Aligned_cols=93  Identities=19%  Similarity=0.185  Sum_probs=58.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G---~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      +++|.|.||+|.+|+.+++.|.+++   .+++++....+.... +.-.+......|+ +++    .++++|+||.|.|  
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~-~~~~~~~i~~~~~-~~~----~~~~vDvVf~a~g--   74 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKT-YRFNGKTVRVQNV-EEF----DWSQVHIALFSAG--   74 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCE-EEETTEEEEEEEG-GGC----CGGGCSEEEECSC--
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCc-eeecCceeEEecC-ChH----HhcCCCEEEECCC--
Confidence            5789999999999999999999873   577777632221111 1111111111222 122    2358999999987  


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                               ...+...++.+.+.|+ ++|-.|+.
T Consensus        75 ---------~~~s~~~a~~~~~~G~-~vId~s~~   98 (336)
T 2r00_A           75 ---------GELSAKWAPIAAEAGV-VVIDNTSH   98 (336)
T ss_dssp             ---------HHHHHHHHHHHHHTTC-EEEECSST
T ss_pred             ---------chHHHHHHHHHHHcCC-EEEEcCCc
Confidence                     1234566777778886 67777765

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.55  E-value=0.00015  Score=61.07  Aligned_cols=97  Identities=22%  Similarity=0.210  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCC-------------------Ccc---cccc--CC--CEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPA-------------------PAD---FLRD--WG--ATVVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~-------------------~~~---~~~~--~~--~~~i~  133 (269)
                      +.+++|+|+|+ |++|..+++.|+..|. ++++++++.-.                   ...   .+..  ..  ++.+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            45679999995 9999999999999996 89999887511                   100   0111  12  33444


Q ss_pred             cCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                      .++++ +.+.++++++|+||.+..          |...-..+.+++++.++ .+|+.
T Consensus       108 ~~~~~-~~~~~~~~~~DvVi~~~d----------~~~~~~~l~~~~~~~~~-p~i~~  152 (249)
T 1jw9_B          108 ALLDD-AELAALIAEHDLVLDCTD----------NVAVRNQLNAGCFAAKV-PLVSG  152 (249)
T ss_dssp             SCCCH-HHHHHHHHTSSEEEECCS----------SHHHHHHHHHHHHHHTC-CEEEE
T ss_pred             ccCCH-hHHHHHHhCCCEEEEeCC----------CHHHHHHHHHHHHHcCC-CEEEe
Confidence            44543 456677889999999874          22333456677777765 34443

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.54  E-value=0.00014  Score=66.46  Aligned_cols=94  Identities=19%  Similarity=0.327  Sum_probs=65.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-C---eEEEEeCCCCCCccccccCCCEEEEcCCCCC---CcHHHHhcCccEEEEcC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG-Y---DVRCLVRPRPAPADFLRDWGATVVNADLSKP---ETIPATLVGVHTVIDCA  156 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G-~---~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~---~~l~~~~~~~d~vi~~a  156 (269)
                      ++|+|+| .|.||+.++..|+++. +   +|++.+..... .+..+..++.+...++++.   +.+.+++++.|+|||++
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~-~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s   91 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK-VDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDVS   91 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCS-CCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEECC
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhh-hhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEECC
Confidence            5799999 7999999999999864 5   68888775443 2333334677777777655   33566776679999865


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      -..           ....++++|.++|+ .+|-++
T Consensus        92 ~~~-----------~~l~Im~acleaGv-~YlDTa  114 (480)
T 2ph5_A           92 IGI-----------SSLALIILCNQKGA-LYINAA  114 (480)
T ss_dssp             SSS-----------CHHHHHHHHHHHTC-EEEESS
T ss_pred             ccc-----------cCHHHHHHHHHcCC-CEEECC
Confidence            311           12468999999987 555444

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.54  E-value=7.2e-05  Score=65.95  Aligned_cols=107  Identities=17%  Similarity=0.166  Sum_probs=70.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCCCCCC-----ccccccCC----CEEEEcCCCCCCcHH
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRPAP-----ADFLRDWG----ATVVNADLSKPETIP  143 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-------~V~~~~R~~~~~-----~~~~~~~~----~~~i~~Dl~d~~~l~  143 (269)
                      .|+..||.|+||+|+||+.++-.|+....       ++.+++..+...     .-.+.+..    ...+.     ..+..
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~-----~~~~~   95 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVV-----TADPR   95 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEE-----ESCHH
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEE-----cCChH
Confidence            36667999999999999999988887542       788888754211     00111111    11111     22356


Q ss_pred             HHhcCccEEEEcCCCC-----CCccchhhcHHHHHHHHHHHHHcC-CC-eEEEec
Q 024290          144 ATLVGVHTVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMG-IQ-KYVFYS  191 (269)
Q Consensus       144 ~~~~~~d~vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~-v~-r~V~~S  191 (269)
                      ++++++|+||.++|..     ...+.++.|..-.+.+.+.+.+.. .. +++.+|
T Consensus        96 ~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs  150 (345)
T 4h7p_A           96 VAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG  150 (345)
T ss_dssp             HHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             HHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence            7889999999999942     234567788888888888887653 22 455555

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.53  E-value=5.4e-05  Score=64.83  Aligned_cols=70  Identities=13%  Similarity=0.155  Sum_probs=52.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+++++|+|+ |++|++++..|.+.|+ +|++..|+.++..++..  .+..+     ..+++.+++.++|+||++..
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~--~~~~~-----~~~~~~~~~~~aDiVInaTp  184 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL--NINKI-----NLSHAESHLDEFDIIINTTP  184 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS--CCEEE-----CHHHHHHTGGGCSEEEECCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH--hcccc-----cHhhHHHHhcCCCEEEECcc
Confidence            356789999996 8999999999999998 99999998765544322  22221     12345666778999999875

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.48  E-value=0.00024  Score=63.22  Aligned_cols=75  Identities=19%  Similarity=0.268  Sum_probs=54.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh--cCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL--VGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~--~~~d~vi~~ag~  158 (269)
                      ..+++|+|+||+|.+|..+++.+...|.+|+++++ +++ .+.+++.++..+ .|..+.+..+++.  .++|+||+++|.
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~-~~~~~~lGa~~v-~~~~~~~~~~~~~~~~g~D~vid~~g~  258 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDA-SELVRKLGADDV-IDYKSGSVEEQLKSLKPFDFILDNVGG  258 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGG-HHHHHHTTCSEE-EETTSSCHHHHHHTSCCBSEEEESSCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHH-HHHHHHcCCCEE-EECCchHHHHHHhhcCCCCEEEECCCC
Confidence            35689999999999999999999999999998884 333 333455565433 3665544333333  479999999984

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=97.48  E-value=0.00087  Score=51.22  Aligned_cols=107  Identities=17%  Similarity=0.115  Sum_probs=68.3

Q ss_pred             CCCEEEEECCC---cHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           82 RPTSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        82 ~~~~vlVtGat---G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      ..++|.|+|++   |.+|..+++.|.+.||+|+.+  ++.+..+.+  .+       +.-..++.++-+.+|+++-+.. 
T Consensus        12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~v--np~~~~~~i--~G-------~~~~~sl~el~~~vDlavi~vp-   79 (140)
T 1iuk_A           12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPV--NPRFQGEEL--FG-------EEAVASLLDLKEPVDILDVFRP-   79 (140)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEE--CGGGTTSEE--TT-------EECBSSGGGCCSCCSEEEECSC-
T ss_pred             CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEe--CCCcccCcC--CC-------EEecCCHHHCCCCCCEEEEEeC-
Confidence            35789999998   889999999999999986654  333111111  11       1112334444457899988764 


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                                -.....+++.+.+.|++.+++.+...            ..++.+++++.|+++.
T Consensus        80 ----------~~~~~~v~~~~~~~gi~~i~~~~g~~------------~~~~~~~a~~~Gir~v  121 (140)
T 1iuk_A           80 ----------PSALMDHLPEVLALRPGLVWLQSGIR------------HPEFEKALKEAGIPVV  121 (140)
T ss_dssp             ----------HHHHTTTHHHHHHHCCSCEEECTTCC------------CHHHHHHHHHTTCCEE
T ss_pred             ----------HHHHHHHHHHHHHcCCCEEEEcCCcC------------HHHHHHHHHHcCCEEE
Confidence                      23334566777788998776544321            1455567788898865

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.48  E-value=0.00038  Score=60.69  Aligned_cols=102  Identities=8%  Similarity=0.013  Sum_probs=64.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccc---cccC-----CCEEEEcCCCCCCcHHHHhcCccE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADF---LRDW-----GATVVNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~---~~~~-----~~~~i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      +++||.|+|+ |++|..++-.|+..|.  +|++++.++++....   +.+.     .+.+. .  .+    .++++++|+
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~~~aDv   77 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----YSDVKDCDV   77 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HHHhCCCCE
Confidence            3468999997 9999999999999987  999999986543321   1111     11111 1  11    445789999


Q ss_pred             EEEcCCCCCC-----ccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          152 VIDCATGRPE-----EPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       152 vi~~ag~~~~-----~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      ||.+++....     .+....|....+.+++.+.+....-+|.+.
T Consensus        78 Vii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (318)
T 1y6j_A           78 IVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  122 (318)
T ss_dssp             EEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             EEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence            9999984321     133456777777888888876544344433

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.47  E-value=0.00027  Score=60.15  Aligned_cols=65  Identities=17%  Similarity=0.237  Sum_probs=50.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      +++++|+|+ |+.|++++..|++.|.+|++..|+.++..++. +.++..+  ++.+   +    .+.|+|||+...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~~~--~~~~---l----~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCDCF--MEPP---K----SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCEEE--SSCC---S----SCCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEe--cHHH---h----ccCCEEEEcccC
Confidence            789999995 99999999999999999999999987765544 4444433  3322   2    178999999763

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.47  E-value=7.1e-05  Score=65.17  Aligned_cols=74  Identities=22%  Similarity=0.297  Sum_probs=56.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ..+.+|+|+||+|.+|...++.+...|.+|++++++. + .+.+++.++..+ .|..+.+.+.+.+.++|+||++.|
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~lGa~~~-i~~~~~~~~~~~~~g~D~v~d~~g  224 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKALGAEQC-INYHEEDFLLAISTPVDAVIDLVG  224 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHHHTCSEE-EETTTSCHHHHCCSCEEEEEESSC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHHcCCCEE-EeCCCcchhhhhccCCCEEEECCC
Confidence            3568999999999999999999999999999887642 2 344445565532 366655546777789999999998

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.45  E-value=9.8e-05  Score=67.33  Aligned_cols=100  Identities=16%  Similarity=0.134  Sum_probs=63.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEE-E---cCCCC----------------CC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVV-N---ADLSK----------------PE  140 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i-~---~Dl~d----------------~~  140 (269)
                      ..+++|+|+||+|.||..+++.+...|.+|+++++++++.. .+++.++..+ .   .|+.+                .+
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~-~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEA-AVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAK  297 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhcCCCEEEecccccccccccccccccchhhhHHHH
Confidence            35689999999999999999999999999999998654432 2344454322 1   12211                12


Q ss_pred             cHHHHh-cCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          141 TIPATL-VGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       141 ~l~~~~-~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      .+.+.. .++|+||+++|.           ......++.++.  -+++|.+++..
T Consensus       298 ~v~~~~g~g~Dvvid~~G~-----------~~~~~~~~~l~~--~G~iv~~G~~~  339 (447)
T 4a0s_A          298 LVVEKAGREPDIVFEHTGR-----------VTFGLSVIVARR--GGTVVTCGSSS  339 (447)
T ss_dssp             HHHHHHSSCCSEEEECSCH-----------HHHHHHHHHSCT--TCEEEESCCTT
T ss_pred             HHHHHhCCCceEEEECCCc-----------hHHHHHHHHHhc--CCEEEEEecCC
Confidence            222333 369999999982           111223333332  25899988654

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.45  E-value=0.00034  Score=60.95  Aligned_cols=104  Identities=13%  Similarity=0.120  Sum_probs=69.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCC--CCCcc---cccc------CCCEEEEcCCCCCCcHHHHhcC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPR--PAPAD---FLRD------WGATVVNADLSKPETIPATLVG  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~--~~~~~---~~~~------~~~~~i~~Dl~d~~~l~~~~~~  148 (269)
                      |..++|.|+|+ |.+|..++..|+..|+ +|+++++++  +....   .+.+      ....+...+  |    .+.+++
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d----~~a~~~   78 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--D----YADTAD   78 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C----GGGGTT
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C----HHHhCC
Confidence            45679999996 9999999999999999 999999973  21110   0000      112222111  1    246789


Q ss_pred             ccEEEEcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          149 VHTVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       149 ~d~vi~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      +|+||.++|...     ..+.+..|....+.+++.+.+.... .++.+|
T Consensus        79 aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           79 SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            999999998432     2245567777788888888877544 555555

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.45  E-value=0.0012  Score=58.06  Aligned_cols=94  Identities=20%  Similarity=0.128  Sum_probs=59.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCC---CCCccc------cccC-CCEEEEcCCCCCCcHHHHhcCccE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPR---PAPADF------LRDW-GATVVNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~---~~~~~~------~~~~-~~~~i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      |++|.|+||||++|+.+++.|.+. ++++..+..+.   ......      +... ...+...  .   +..++++++|+
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~---~~~~~~~~~Dv   78 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--S---DISEFSPGVDV   78 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--S---SGGGTCTTCSE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--C---CHHHHhcCCCE
Confidence            478999999999999999999984 57888776543   222111      1111 2222222  0   12233368999


Q ss_pred             EEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          152 VIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       152 vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      ||.|.+           -.....+++.+.+.|+ ++|=+|+.
T Consensus        79 vf~a~p-----------~~~s~~~~~~~~~~g~-~vIDlSa~  108 (337)
T 3dr3_A           79 VFLATA-----------HEVSHDLAPQFLEAGC-VVFDLSGA  108 (337)
T ss_dssp             EEECSC-----------HHHHHHHHHHHHHTTC-EEEECSST
T ss_pred             EEECCC-----------hHHHHHHHHHHHHCCC-EEEEcCCc
Confidence            999987           2233556666677786 67777765

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.44  E-value=0.00012  Score=64.31  Aligned_cols=98  Identities=17%  Similarity=0.208  Sum_probs=65.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHH---HHhcCccEEEEcCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIP---ATLVGVHTVIDCATG  158 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~---~~~~~~d~vi~~ag~  158 (269)
                      .+++|+|+|+ |.+|..+++.+...|++|+++++++++.. .+++.++..+ .|..+.+..+   ++..++|+||+++|.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~~-~d~~~~~~~~~~~~~~~~~d~vid~~g~  240 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE-LAKELGADLV-VNPLKEDAAKFMKEKVGGVHAAVVTAVS  240 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHTTCSEE-ECTTTSCHHHHHHHHHSSEEEEEESSCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHCCCCEE-ecCCCccHHHHHHHHhCCCCEEEECCCC
Confidence            4679999999 77999999999999999999998755433 2344565433 5776543222   222579999999983


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      .          ......++.++..  +++|.++...
T Consensus       241 ~----------~~~~~~~~~l~~~--G~~v~~g~~~  264 (339)
T 1rjw_A          241 K----------PAFQSAYNSIRRG--GACVLVGLPP  264 (339)
T ss_dssp             H----------HHHHHHHHHEEEE--EEEEECCCCS
T ss_pred             H----------HHHHHHHHHhhcC--CEEEEecccC
Confidence            1          1122344444333  4888887643

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.44  E-value=9.6e-05  Score=65.38  Aligned_cols=75  Identities=20%  Similarity=0.147  Sum_probs=55.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+.+|+|+|+ |.+|...++.+...|.+|+++++++++.....++.++..+ .|..+.+.+.++..++|+||+++|.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDY-VIGSDQAKMSELADSLDYVIDTVPV  254 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCE-EETTCHHHHHHSTTTEEEEEECCCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCcee-eccccHHHHHHhcCCCCEEEECCCC
Confidence            5689999995 9999999999888999999999976654333324554432 3455545555555689999999984

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.43  E-value=0.0008  Score=58.19  Aligned_cols=68  Identities=22%  Similarity=0.238  Sum_probs=51.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .++++|.|+| .|.+|..+++.|++.|++|++.+|++++..+..+ .++.       ..+++.++++++|+||.+..
T Consensus         7 ~~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~-------~~~~~~e~~~~aDvVi~~vp   74 (306)
T 3l6d_A            7 SFEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVA-AGAH-------LCESVKAALSASPATIFVLL   74 (306)
T ss_dssp             CCSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH-HTCE-------ECSSHHHHHHHSSEEEECCS
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCe-------ecCCHHHHHhcCCEEEEEeC
Confidence            4567899998 6999999999999999999999998655443222 2332       13466777778999999875

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.42  E-value=6.9e-05  Score=64.62  Aligned_cols=73  Identities=21%  Similarity=0.206  Sum_probs=47.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEE--------cCCCCCCcHHHHhcCccEEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVN--------ADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~--------~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      +|+|.|+|+ |.+|..++..|.+.|++|++++|+++..... .+.++....        .+..+.+++.+.++++|+||.
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~   80 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAI-RKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA   80 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHH-HhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence            468999995 9999999999999999999999976543322 122322221        111122233334457899998


Q ss_pred             cCC
Q 024290          155 CAT  157 (269)
Q Consensus       155 ~ag  157 (269)
                      +..
T Consensus        81 ~v~   83 (316)
T 2ew2_A           81 LTK   83 (316)
T ss_dssp             CSC
T ss_pred             Eec
Confidence            875

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.41  E-value=8e-05  Score=67.21  Aligned_cols=72  Identities=24%  Similarity=0.440  Sum_probs=54.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      +.+++|+|+|+ |.+|+.+++.|...|. +|++.+|+.++..+.....++..+  +   .+++.+.+.++|+||.+.+.
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~--~---~~~l~~~l~~aDvVi~at~~  237 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAV--R---FDELVDHLARSDVVVSATAA  237 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEEC--C---GGGHHHHHHTCSEEEECCSS
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCcee--c---HHhHHHHhcCCCEEEEccCC
Confidence            56889999997 9999999999999998 999999976543333333344422  2   34577777899999999874

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=97.41  E-value=0.00049  Score=62.87  Aligned_cols=77  Identities=21%  Similarity=0.093  Sum_probs=57.5

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC---CccccccCCCEEEEcCCCCCCcHHHHhcC-ccEEEE
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA---PADFLRDWGATVVNADLSKPETIPATLVG-VHTVID  154 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~---~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~-~d~vi~  154 (269)
                      +.+.+|+|+|+|. |..|..+++.|.++|++|++.+++...   ..+.+++.++++..+.-  ++   +.+.+ +|.||.
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~--~~---~~~~~~~d~vv~   78 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSH--PL---ELLDEDFCYMIK   78 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCC--CG---GGGGSCEEEEEE
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCC--hH---HhhcCCCCEEEE
Confidence            3467899999997 889999999999999999999986531   22345566888876653  22   23455 899999


Q ss_pred             cCCCCCC
Q 024290          155 CATGRPE  161 (269)
Q Consensus       155 ~ag~~~~  161 (269)
                      ..|..+.
T Consensus        79 spgi~~~   85 (451)
T 3lk7_A           79 NPGIPYN   85 (451)
T ss_dssp             CTTSCTT
T ss_pred             CCcCCCC
Confidence            9886543

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.41  E-value=0.00049  Score=59.84  Aligned_cols=104  Identities=13%  Similarity=0.069  Sum_probs=68.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHC-C--CeEEEEeCCCCCCcc---ccccCC--CEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           84 TSILVVGATGTLGRQIVRRALDE-G--YDVRCLVRPRPAPAD---FLRDWG--ATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~-G--~~V~~~~R~~~~~~~---~~~~~~--~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      |||.|+||+|.+|..++..|..+ +  .+++++++++ ....   .+.+..  ..+... ..  +...+.++++|+||.+
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivii~   76 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVLIS   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEEEe
Confidence            58999999999999999998875 5  5899999875 2211   111111  111111 01  2345678899999999


Q ss_pred             CCCCC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          156 ATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       156 ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      +|...     ..+.++.|..-.+.+.+.+.+...+ .++.+|
T Consensus        77 ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           77 AGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             CSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            98432     2345667888888888888877544 555554

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.41  E-value=3.7e-05  Score=66.43  Aligned_cols=101  Identities=12%  Similarity=0.017  Sum_probs=68.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCcc---cccc------CCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRD------WGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~---~~~~------~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      |||.|+|+ |.+|..++..|+..|+  +|++++++++....   .+.+      ....+...     .+ .++++++|+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t-----~d-~~a~~~aDiV   73 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-----AD-YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-----SC-GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe-----CC-HHHhCCCCEE
Confidence            58999998 9999999999999997  99999997654320   0111      12222211     12 4577899999


Q ss_pred             EEcCCCCCC-----ccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          153 IDCATGRPE-----EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       153 i~~ag~~~~-----~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      |.++|....     .+....|..-.+.+++.+.+.+.. .++.+|
T Consensus        74 Viaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            999984321     234566777778888888877544 455555

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.40  E-value=0.00011  Score=62.84  Aligned_cols=66  Identities=17%  Similarity=0.296  Sum_probs=49.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      +|+|.|+|++|.+|..+++.|.+.|++|++.+|+++..... .+.++     +..+   ..++++++|+||.+..
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~-~~~g~-----~~~~---~~~~~~~aDvVi~av~   76 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRL-QGMGI-----PLTD---GDGWIDEADVVVLALP   76 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHH-HHTTC-----CCCC---SSGGGGTCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-HhcCC-----CcCC---HHHHhcCCCEEEEcCC
Confidence            46899999889999999999999999999999975543332 22332     2222   3345678999999875

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.39  E-value=0.00038  Score=63.88  Aligned_cols=96  Identities=20%  Similarity=0.320  Sum_probs=71.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPAT-LVGVHTVIDCATGRP  160 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~~  160 (269)
                      .++|+|.|| |.+|..+++.| +++++|.++.++.++...+.+. .+..++.+|-+|++-|.+. ++.+|++|-+.+.. 
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~D-  311 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALTNED-  311 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCSCH-
T ss_pred             ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcccCc-
Confidence            478999995 99999999987 5679999999876654433333 2688999999999888765 57789999877521 


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                           +.|+.    ....|++.|+++.|-.
T Consensus       312 -----e~Ni~----~~llAk~~gv~kvIa~  332 (461)
T 4g65_A          312 -----ETNIM----SAMLAKRMGAKKVMVL  332 (461)
T ss_dssp             -----HHHHH----HHHHHHHTTCSEEEEE
T ss_pred             -----HHHHH----HHHHHHHcCCcccccc
Confidence                 24433    3345678899987764

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.39  E-value=8.6e-05  Score=61.20  Aligned_cols=69  Identities=16%  Similarity=0.182  Sum_probs=48.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEE-EeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRC-LVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~-~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |++|+|.|+| +|.+|..+++.|.+.|++|++ .+|++++..+..++.++....       +..+.++++|+||.+..
T Consensus        21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~-------~~~~~~~~aDvVilavp   90 (220)
T 4huj_A           21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA-------VELKDALQADVVILAVP   90 (220)
T ss_dssp             GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE-------CCHHHHTTSSEEEEESC
T ss_pred             hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc-------ChHHHHhcCCEEEEeCC
Confidence            4567899999 799999999999999999999 788766554433322332221       11233567888887764

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.37  E-value=5.9e-05  Score=64.40  Aligned_cols=72  Identities=15%  Similarity=0.251  Sum_probs=49.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCC-CEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWG-ATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~-~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+++++|+|+ |++|++++..|++.|. +|++..|+.++..++.+..+ ..+...++.+   +..  .++|+||++..
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~---l~~--~~~DivInaTp  190 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA---LEG--QSFDIVVNATS  190 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG---GTT--CCCSEEEECSS
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH---hcc--cCCCEEEECCC
Confidence            467899999996 8999999999999995 99999998655443322211 0111223322   222  57899999875

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=97.37  E-value=0.00056  Score=52.64  Aligned_cols=106  Identities=20%  Similarity=0.178  Sum_probs=65.2

Q ss_pred             CCEEEEECCC---cHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           83 PTSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGat---G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      .++|.|+|++   |.+|..+++.|++.|++|+.+..+.. ..+.   .++..       ..++.++.+.+|+++-+... 
T Consensus        13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~-g~~i---~G~~~-------~~sl~el~~~~Dlvii~vp~-   80 (145)
T 2duw_A           13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVA-GKTL---LGQQG-------YATLADVPEKVDMVDVFRNS-   80 (145)
T ss_dssp             CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSST-TSEE---TTEEC-------CSSTTTCSSCCSEEECCSCS-
T ss_pred             CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccc-cccc---CCeec-------cCCHHHcCCCCCEEEEEeCH-
Confidence            5679999998   88999999999999999777655431 0111   12211       12222233478999887641 


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                        +        ....+++.+.+.|++.+++..+..            -..+.+.+++.|+++.
T Consensus        81 --~--------~v~~v~~~~~~~g~~~i~i~~~~~------------~~~l~~~a~~~Gi~~i  121 (145)
T 2duw_A           81 --E--------AAWGVAQEAIAIGAKTLWLQLGVI------------NEQAAVLAREAGLSVV  121 (145)
T ss_dssp             --T--------HHHHHHHHHHHHTCCEEECCTTCC------------CHHHHHHHHTTTCEEE
T ss_pred             --H--------HHHHHHHHHHHcCCCEEEEcCChH------------HHHHHHHHHHcCCEEE
Confidence              1        123455556667887766543211            2445556778888765

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.37  E-value=0.00079  Score=58.65  Aligned_cols=102  Identities=10%  Similarity=0.114  Sum_probs=66.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCccc---ccc------CCCEEEEcCCCCCCcHHHHhcCc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADF---LRD------WGATVVNADLSKPETIPATLVGV  149 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~---~~~------~~~~~i~~Dl~d~~~l~~~~~~~  149 (269)
                      |+++||.|+|+ |.+|..++..|+..|  .+|+++++++++....   +.+      ..+++. .|  +    .++++++
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~----~~a~~~a   75 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--E----YSDCHDA   75 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--C----GGGGTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--C----HHHhCCC
Confidence            45679999998 999999999999888  4899998865322110   111      122333 22  1    4557899


Q ss_pred             cEEEEcCCCCCCc-----cchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          150 HTVIDCATGRPEE-----PIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       150 d~vi~~ag~~~~~-----~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                      |+||.++|.....     +....|....+.+++.+.+....-+|.+
T Consensus        76 DvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv  121 (317)
T 3d0o_A           76 DLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLV  121 (317)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence            9999999853221     3345666667778888877754434433

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=97.36  E-value=0.00096  Score=59.28  Aligned_cols=92  Identities=12%  Similarity=0.139  Sum_probs=54.4

Q ss_pred             CEEEEECCCcHHHHHHHH-HHHHCC---CeEEEEeCCCCCCccc--cccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVR-RALDEG---YDVRCLVRPRPAPADF--LRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~-~Ll~~G---~~V~~~~R~~~~~~~~--~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ++|.|.||||++|+.+++ .|.++.   .++..++.+. .....  +......     +.+.++.. .++++|+||.|++
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~~~~~-----~~~~~~~~-~~~~~Dvvf~a~~   73 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGKDAGM-----LHDAFDIE-SLKQLDAVITCQG   73 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSSCCCB-----CEETTCHH-HHTTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCCCceE-----EEecCChh-HhccCCEEEECCC
Confidence            479999999999999999 666665   3666554332 21111  1111111     11122222 3578999999987


Q ss_pred             CCCCccchhhcHHHHHHHHHHHHHcCCC-eEEEeccc
Q 024290          158 GRPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIH  193 (269)
Q Consensus       158 ~~~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~SS~  193 (269)
                                 -..+......+.+.|++ ++|=.|+.
T Consensus        74 -----------~~~s~~~~~~~~~~G~k~~VID~ss~   99 (370)
T 3pzr_A           74 -----------GSYTEKVYPALRQAGWKGYWIDAAST   99 (370)
T ss_dssp             -----------HHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred             -----------hHHHHHHHHHHHHCCCCEEEEeCCch
Confidence                       22335566666778875 55555553

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.36  E-value=0.00014  Score=63.99  Aligned_cols=70  Identities=24%  Similarity=0.333  Sum_probs=51.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh------cCccEEEEc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL------VGVHTVIDC  155 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~------~~~d~vi~~  155 (269)
                      .+++|||+||+|.+|..+++.+...|++|+++ +++++ .+.+++.++..  .| .+. ++.+.+      .++|+||++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~-~~~~~~lGa~~--i~-~~~-~~~~~~~~~~~~~g~D~vid~  223 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSD-LEYVRDLGATP--ID-ASR-EPEDYAAEHTAGQGFDLVYDT  223 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHH-HHHHHHHTSEE--EE-TTS-CHHHHHHHHHTTSCEEEEEES
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHH-HHHHHHcCCCE--ec-cCC-CHHHHHHHHhcCCCceEEEEC
Confidence            46899999999999999999999999999998 65443 33345557766  45 333 333322      369999999


Q ss_pred             CC
Q 024290          156 AT  157 (269)
Q Consensus       156 ag  157 (269)
                      +|
T Consensus       224 ~g  225 (343)
T 3gaz_A          224 LG  225 (343)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.35  E-value=0.0012  Score=57.51  Aligned_cols=68  Identities=25%  Similarity=0.389  Sum_probs=52.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ..+|+|.|+| .|.+|..+++.|++.|++|++.+|++++..+. .+.++..       .+++.++++++|+||.+..
T Consensus        29 ~~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l-~~~g~~~-------~~~~~e~~~~aDvVi~~vp   96 (320)
T 4dll_A           29 PYARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASL-AALGATI-------HEQARAAARDADIVVSMLE   96 (320)
T ss_dssp             CCCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HTTTCEE-------ESSHHHHHTTCSEEEECCS
T ss_pred             cCCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHH-HHCCCEe-------eCCHHHHHhcCCEEEEECC
Confidence            3457899998 59999999999999999999999986554432 2224322       3466778889999998875

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.34  E-value=0.00054  Score=60.31  Aligned_cols=97  Identities=23%  Similarity=0.267  Sum_probs=63.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCC-CCc---HHHHh-----cCccEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK-PET---IPATL-----VGVHTV  152 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d-~~~---l~~~~-----~~~d~v  152 (269)
                      .+.+|+|+|+ |.+|...++.+...|++|+++++++++. +.+++.++.. ..|..+ .+.   +.+..     .++|+|
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~lGa~~-~~~~~~~~~~~~~i~~~~~~~~g~g~D~v  244 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAKNCGADV-TLVVDPAKEEESSIIERIRSAIGDLPNVT  244 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHH-HHHHHhCCCE-EEcCcccccHHHHHHHHhccccCCCCCEE
Confidence            4679999996 9999999999999999999988875443 2334456543 235554 333   33333     369999


Q ss_pred             EEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          153 IDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       153 i~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      |+++|..          ......++.++.  -+++|.++..
T Consensus       245 id~~g~~----------~~~~~~~~~l~~--~G~iv~~G~~  273 (352)
T 1e3j_A          245 IDCSGNE----------KCITIGINITRT--GGTLMLVGMG  273 (352)
T ss_dssp             EECSCCH----------HHHHHHHHHSCT--TCEEEECSCC
T ss_pred             EECCCCH----------HHHHHHHHHHhc--CCEEEEEecC
Confidence            9999831          111233444433  2589988753

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=97.34  E-value=0.00081  Score=56.33  Aligned_cols=36  Identities=19%  Similarity=0.440  Sum_probs=28.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEE-EeCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRC-LVRPR  117 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~-~~R~~  117 (269)
                      |+|+||.|+|+ |.+|+.+++.+.+++.++++ ++|+.
T Consensus         1 M~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~   37 (243)
T 3qy9_A            1 MASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP   37 (243)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred             CCceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc
Confidence            34689999999 99999999999998777766 45543

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.33  E-value=0.00066  Score=59.09  Aligned_cols=101  Identities=12%  Similarity=0.107  Sum_probs=68.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccc---ccc------CCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADF---LRD------WGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~---~~~------~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      |||.|+|+ |.+|..++..|+..|.  +|+++++++++....   +.+      ....+...|  +    .+.++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence            58999996 9999999999999886  999999987543211   111      123333222  1    3467799999


Q ss_pred             EEcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          153 IDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       153 i~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      |.++|...     ..+.+..|..-.+.+.+.+.+.... .++.+|
T Consensus        74 ii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           74 IITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             EECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             EECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            99998432     3345567888888888888877544 455555

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.32  E-value=0.00099  Score=58.35  Aligned_cols=104  Identities=17%  Similarity=0.112  Sum_probs=70.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCcc---ccccC-----CCEEEEcCCCCCCcHHHHhcCcc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRDW-----GATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~---~~~~~-----~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      ...+||.|+|+ |.+|..++..|+.+|.  +|++++++.++...   .+.+.     ....+..+  |   . +.++++|
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d---~-~~~~~aD   89 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--D---Y-SVTANSK   89 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--S---G-GGGTTEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--C---H-HHhCCCC
Confidence            55689999997 9999999999999986  89999987532211   01111     11222221  2   2 2478999


Q ss_pred             EEEEcCCCC-----CCccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          151 TVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       151 ~vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      +||.++|..     ...+.++.|..-.+.+.+.+.+.... .++.+|
T Consensus        90 iVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           90 LVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999999942     23466778888888888888877544 555555

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=97.32  E-value=0.0011  Score=59.08  Aligned_cols=93  Identities=14%  Similarity=0.175  Sum_probs=55.2

Q ss_pred             CCEEEEECCCcHHHHHHHH-HHHHCC---CeEEEEeCCCCCCccc--cccCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           83 PTSILVVGATGTLGRQIVR-RALDEG---YDVRCLVRPRPAPADF--LRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~-~Ll~~G---~~V~~~~R~~~~~~~~--~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      .++|.|.||||++|+.+++ .|.++.   .++..++.+ ......  +......+.  |+.   +.. .+.++|+||.|+
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~~~~~~~~v~--~~~---~~~-~~~~vDvvf~a~   76 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPSFAKNETTLK--DAT---SID-DLKKCDVIITCQ   76 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCTTCCSCCBCE--ETT---CHH-HHHTCSEEEECS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHHcCCCceEEE--eCC---Chh-HhcCCCEEEECC
Confidence            3689999999999999999 666665   366665543 222111  111111111  221   222 246899999998


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCC-eEEEeccc
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIH  193 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~SS~  193 (269)
                      +           -..+..+...+.+.|++ ++|=.|+.
T Consensus        77 ~-----------~~~s~~~~~~~~~~G~k~~VID~ss~  103 (377)
T 3uw3_A           77 G-----------GDYTNDVFPKLRAAGWNGYWIDAASS  103 (377)
T ss_dssp             C-----------HHHHHHHHHHHHHTTCCSEEEECSST
T ss_pred             C-----------hHHHHHHHHHHHHCCCCEEEEeCCcc
Confidence            7           22335566667778875 55555553

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.32  E-value=0.00054  Score=58.59  Aligned_cols=75  Identities=20%  Similarity=0.256  Sum_probs=50.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-----------C-CCE-----EEEcCCCCCCcHHH
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-----------W-GAT-----VVNADLSKPETIPA  144 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-----------~-~~~-----~i~~Dl~d~~~l~~  144 (269)
                      ..++|.|+|+ |.+|..++..|++.|++|++.+|+++......+.           . ++.     -....+.-.+++.+
T Consensus         3 ~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~   81 (283)
T 4e12_A            3 GITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ   81 (283)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence            4578999985 9999999999999999999999986543322111           0 000     00000111345667


Q ss_pred             HhcCccEEEEcCC
Q 024290          145 TLVGVHTVIDCAT  157 (269)
Q Consensus       145 ~~~~~d~vi~~ag  157 (269)
                      +++++|+||.+..
T Consensus        82 ~~~~aDlVi~av~   94 (283)
T 4e12_A           82 AVKDADLVIEAVP   94 (283)
T ss_dssp             HTTTCSEEEECCC
T ss_pred             HhccCCEEEEecc
Confidence            7889999999886

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.32  E-value=0.00034  Score=61.83  Aligned_cols=93  Identities=13%  Similarity=0.122  Sum_probs=58.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEe-CCCCCCccc---ccc----------CCCEEEEcCCCCCCcHHHHh
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEG-YDVRCLV-RPRPAPADF---LRD----------WGATVVNADLSKPETIPATL  146 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~-R~~~~~~~~---~~~----------~~~~~i~~Dl~d~~~l~~~~  146 (269)
                      ++++|.|.||+|++|+.+++.|.+.. .+++++. .+.......   ...          ..+.+  .|+ |++.    +
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~-d~~~----~   75 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPI--VST-NYED----H   75 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBE--ECS-SGGG----G
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEE--eeC-CHHH----h
Confidence            35789999999999999999988764 5888875 221111111   000          01111  222 2222    3


Q ss_pred             cCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          147 VGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       147 ~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      +++|+||.|.+           ......++..+.++|+ ++|-.|+.
T Consensus        76 ~~vDvVf~atp-----------~~~s~~~a~~~~~aG~-~VId~s~~  110 (350)
T 2ep5_A           76 KDVDVVLSALP-----------NELAESIELELVKNGK-IVVSNASP  110 (350)
T ss_dssp             TTCSEEEECCC-----------HHHHHHHHHHHHHTTC-EEEECSST
T ss_pred             cCCCEEEECCC-----------hHHHHHHHHHHHHCCC-EEEECCcc
Confidence            68999999887           1234567777788886 57777764

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.32  E-value=0.00019  Score=63.53  Aligned_cols=74  Identities=14%  Similarity=0.100  Sum_probs=54.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCC-CcHHHHhcCccEEEEcCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP-ETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~-~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+.+|+|+|+ |.+|..+++.+...|++|+++++++++.. .+++.++..+ .|..+. +..+++..++|+||+++|.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~-~~~~lGa~~v-~~~~~~~~~~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE-DAMKMGADHY-IATLEEGDWGEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHHTCSEE-EEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHcCCCEE-EcCcCchHHHHHhhcCCCEEEECCCC
Confidence            4679999999 99999999999889999999999766543 2334454433 355444 3333333589999999985

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.31  E-value=0.0002  Score=63.03  Aligned_cols=75  Identities=11%  Similarity=0.033  Sum_probs=50.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEE------cCC-CCCCcHHHHhcCccEEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVN------ADL-SKPETIPATLVGVHTVID  154 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~------~Dl-~d~~~l~~~~~~~d~vi~  154 (269)
                      ++|+|.|+|+ |.+|..++..|.+.|++|++++|+++......+..++.+..      ..+ ...+++.++++++|+||.
T Consensus         3 ~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~   81 (359)
T 1bg6_A            3 ESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI   81 (359)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEE
Confidence            3478999995 99999999999999999999999755433322211221111      111 112456677788999999


Q ss_pred             cCC
Q 024290          155 CAT  157 (269)
Q Consensus       155 ~ag  157 (269)
                      +..
T Consensus        82 ~v~   84 (359)
T 1bg6_A           82 VVP   84 (359)
T ss_dssp             CSC
T ss_pred             eCC
Confidence            886

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.31  E-value=9.8e-05  Score=63.05  Aligned_cols=72  Identities=21%  Similarity=0.332  Sum_probs=52.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      .+.+++|+|+|+ |.+|+.++..|.+.|++|++.+|+.++..++.+..++..  .+     ++.++++++|+||++....
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~-----~~~~~~~~aDiVi~atp~~  197 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN-----SPEEVIDKVQVIVNTTSVG  197 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS-----CGGGTGGGCSEEEECSSTT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh-----hHHhhhcCCCEEEEeCCCC
Confidence            456789999995 899999999999999999999998654443333333221  11     4455667899999998743

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.30  E-value=0.00013  Score=62.63  Aligned_cols=69  Identities=14%  Similarity=0.237  Sum_probs=48.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccC----CCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDW----GATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~----~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      .+.+++++|+|+ |++|++++..|++.|+ +|++..|+.++..++.+..    .+..+  ++.+.      ..++|+||+
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~~~l------~~~aDiIIn  193 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ--AFEQL------KQSYDVIIN  193 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE--EGGGC------CSCEEEEEE
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe--eHHHh------cCCCCEEEE
Confidence            467899999996 8999999999999996 9999999865543322211    12222  22221      157899999


Q ss_pred             cCC
Q 024290          155 CAT  157 (269)
Q Consensus       155 ~ag  157 (269)
                      +..
T Consensus       194 aTp  196 (281)
T 3o8q_A          194 STS  196 (281)
T ss_dssp             CSC
T ss_pred             cCc
Confidence            876

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.29  E-value=0.00035  Score=63.30  Aligned_cols=71  Identities=21%  Similarity=0.223  Sum_probs=56.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      .+.+++|+|+|+ |.+|+.+++.+.+.|++|++++.++.......   .-..+..|+.|.+.+.++.+++|+|+.
T Consensus        32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~---ad~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAV---ADRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHH---SSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhh---CCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            356789999995 89999999999999999999987654432222   224667899999999998889999984

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.28  E-value=0.00012  Score=57.18  Aligned_cols=65  Identities=18%  Similarity=0.296  Sum_probs=48.4

Q ss_pred             cHHHHHHHHHHHHCCCeEEEEeCCCCCCc------cccccCCC--EEEEcCCCCC--CcHHHHh-------cCccEEEEc
Q 024290           93 GTLGRQIVRRALDEGYDVRCLVRPRPAPA------DFLRDWGA--TVVNADLSKP--ETIPATL-------VGVHTVIDC  155 (269)
Q Consensus        93 G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~------~~~~~~~~--~~i~~Dl~d~--~~l~~~~-------~~~d~vi~~  155 (269)
                      |.++.+.++.|.+.|++|++..|+.....      +..+..+.  ..+.+|++++  +++.+++       .+ |++|||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn  104 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC  104 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence            57889999999999999999888654322      12333454  4567899998  8877765       34 999999


Q ss_pred             CCC
Q 024290          156 ATG  158 (269)
Q Consensus       156 ag~  158 (269)
                      +|.
T Consensus       105 Agg  107 (157)
T 3gxh_A          105 LAN  107 (157)
T ss_dssp             SBS
T ss_pred             CCC
Confidence            984

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.28  E-value=0.00031  Score=61.77  Aligned_cols=71  Identities=20%  Similarity=0.256  Sum_probs=53.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      ..+.+|+|+|+ |.+|...++.+...|.+|+++++++++.. .+++.++..+.   .+.+.+.+   ++|+||+++|..
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~v~---~~~~~~~~---~~D~vid~~g~~  245 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQ-DALSMGVKHFY---TDPKQCKE---ELDFIISTIPTH  245 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHH-HHHHTTCSEEE---SSGGGCCS---CEEEEEECCCSC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHhcCCCeec---CCHHHHhc---CCCEEEECCCcH
Confidence            35689999997 99999999999999999999998766543 34556665554   34443332   899999999843

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.27  E-value=0.00041  Score=61.25  Aligned_cols=99  Identities=20%  Similarity=0.319  Sum_probs=65.4

Q ss_pred             CCCCEEEEECCCcHHHHHH-HHHH-HHCCCe-EEEEeCCCCC--CccccccCCCEEEEcCCCCCCc--HHHHhcCccEEE
Q 024290           81 VRPTSILVVGATGTLGRQI-VRRA-LDEGYD-VRCLVRPRPA--PADFLRDWGATVVNADLSKPET--IPATLVGVHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l-~~~L-l~~G~~-V~~~~R~~~~--~~~~~~~~~~~~i~~Dl~d~~~--l~~~~~~~d~vi  153 (269)
                      +.+.+|+|+|+ |.+|... ++.+ ...|.+ |++++++++.  ..+.+++.++..+  |..+.+.  +.++-.++|+||
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~i~~~~gg~Dvvi  247 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPDVYEQMDFIY  247 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGGHHHHSCCEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHHHHHhCCCCCEEE
Confidence            33489999999 9999999 8877 778987 9999997651  2334556788776  7665432  333312689999


Q ss_pred             EcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          154 DCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       154 ~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      +++|..          ......++.++..  +++|.++...
T Consensus       248 d~~g~~----------~~~~~~~~~l~~~--G~iv~~g~~~  276 (357)
T 2b5w_A          248 EATGFP----------KHAIQSVQALAPN--GVGALLGVPS  276 (357)
T ss_dssp             ECSCCH----------HHHHHHHHHEEEE--EEEEECCCCC
T ss_pred             ECCCCh----------HHHHHHHHHHhcC--CEEEEEeCCC
Confidence            999831          1112334444333  4888887654

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.26  E-value=0.00051  Score=59.53  Aligned_cols=68  Identities=18%  Similarity=0.279  Sum_probs=49.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ..+|+|.|+| .|.+|..+++.|++.|++|++.+|++++.... .+.++..       .+++.++++++|+||.+..
T Consensus        19 ~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l-~~~g~~~-------~~~~~~~~~~aDvvi~~vp   86 (310)
T 3doj_A           19 SHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDEL-VEHGASV-------CESPAEVIKKCKYTIAMLS   86 (310)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHH-HHTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             ccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHCCCeE-------cCCHHHHHHhCCEEEEEcC
Confidence            4567999998 69999999999999999999999987654432 2233321       2445556666777777664

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.25  E-value=0.00043  Score=59.72  Aligned_cols=73  Identities=16%  Similarity=0.282  Sum_probs=55.6

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      ..+.+++|+|+|+ |.+|+.+++.|...|++|++.+|+.++... +.+.+++.+.     .+++.++++++|+|+.+...
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~-~~~~g~~~~~-----~~~l~~~l~~aDvVi~~~p~  225 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR-ITEMGLVPFH-----TDELKEHVKDIDICINTIPS  225 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCEEEE-----GGGHHHHSTTCSEEEECCSS
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHCCCeEEc-----hhhHHHHhhCCCEEEECCCh
Confidence            3578899999995 999999999999999999999997543222 2223444332     34677888899999999874

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.23  E-value=0.00022  Score=60.19  Aligned_cols=68  Identities=16%  Similarity=0.284  Sum_probs=51.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      +.+ +++|+|+ |+.|++++..|++.|. +|++..|+.++..++.+..+  .+     ..+++.+.++++|+||++..
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~--~~-----~~~~~~~~~~~aDiVInatp  175 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK--IF-----SLDQLDEVVKKAKSLFNTTS  175 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCE--EE-----EGGGHHHHHHTCSEEEECSS
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcc--cC-----CHHHHHhhhcCCCEEEECCC
Confidence            566 8999995 9999999999999998 99999998665444333221  11     23456677888999999875

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=97.21  E-value=0.00047  Score=58.97  Aligned_cols=68  Identities=18%  Similarity=0.281  Sum_probs=52.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~---~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ++++|.|+|+ |.+|..+++.|++.|+   +|++.+|++++..+..+..++..       ..+..++++++|+||-+.-
T Consensus         2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~-------~~~~~~~~~~aDvVilav~   72 (280)
T 3tri_A            2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHT-------TQDNRQGALNADVVVLAVK   72 (280)
T ss_dssp             CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEE-------ESCHHHHHSSCSEEEECSC
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEE-------eCChHHHHhcCCeEEEEeC
Confidence            4578999995 9999999999999998   99999998766544433335442       2345667788999999873

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.20  E-value=0.0004  Score=63.51  Aligned_cols=106  Identities=14%  Similarity=0.097  Sum_probs=62.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEE-------------EcCCCCCCcHHHHhcCcc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVV-------------NADLSKPETIPATLVGVH  150 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i-------------~~Dl~d~~~l~~~~~~~d  150 (269)
                      |+|.|+| .|++|..++..|++.|++|++++|++++...+... .....             .+.+.-..++.++++++|
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g-~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD   80 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSG-TIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD   80 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-CSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcC-CCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence            6899998 59999999999999999999999986543332111 00000             011111245666778899


Q ss_pred             EEEEcCCCCCCccchhhcHHHHHHHHHHHHHc-CCCeEEEecc
Q 024290          151 TVIDCATGRPEEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSI  192 (269)
Q Consensus       151 ~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS  192 (269)
                      +||.+.+..... ....|+.....+++...+. .-+.+|...|
T Consensus        81 vViiaVptp~~~-~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S  122 (450)
T 3gg2_A           81 IIFIAVGTPAGE-DGSADMSYVLDAARSIGRAMSRYILIVTKS  122 (450)
T ss_dssp             EEEECCCCCBCT-TSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred             EEEEEcCCCccc-CCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence            999998743211 1123444444455444432 3344444433

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.19  E-value=0.00098  Score=57.67  Aligned_cols=100  Identities=15%  Similarity=0.108  Sum_probs=63.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccc---ccc-----CCCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADF---LRD-----WGATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~---~~~-----~~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      |||.|+|+ |.+|..++..|+..|+  +|+++++++++....   +.+     ....+..   .+    .+.++++|+||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~----~~a~~~aDvVI   72 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GG----HSELADAQVVI   72 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---EC----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CC----HHHhCCCCEEE
Confidence            48999997 9999999999999998  999999975422110   111     1122221   12    24578999999


Q ss_pred             EcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          154 DCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       154 ~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      .+++...     ..+....|....+.+++.+.+.... .+|.+|
T Consensus        73 i~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           73 LTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             ECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             EcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9997321     2344556777778888888776544 344433

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.19  E-value=0.00067  Score=58.45  Aligned_cols=54  Identities=26%  Similarity=0.337  Sum_probs=44.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      +++|.|+||.|.+|..++..|.+.|++|++++|+++                     .+..++++++|+||.+..
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~---------------------~~~~~~~~~aDvVilavp   74 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW---------------------AVAESILANADVVIVSVP   74 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG---------------------GGHHHHHTTCSEEEECSC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc---------------------cCHHHHhcCCCEEEEeCC
Confidence            468999998999999999999999999999988642                     134556677888888774

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.18  E-value=0.00053  Score=58.97  Aligned_cols=72  Identities=18%  Similarity=0.265  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ..+.+++|+|+| .|.+|+.+++.|...|.+|++.+|+.++... +.+.++..+.     .+++.++++++|+|+.+..
T Consensus       151 ~~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~-~~~~g~~~~~-----~~~l~~~l~~aDvVi~~~p  222 (293)
T 3d4o_A          151 FTIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLAR-IAEMGMEPFH-----ISKAAQELRDVDVCINTIP  222 (293)
T ss_dssp             SCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTSEEEE-----GGGHHHHTTTCSEEEECCS
T ss_pred             CCCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HHHCCCeecC-----hhhHHHHhcCCCEEEECCC
Confidence            357889999999 5999999999999999999999997543222 2233555432     3467788889999999885

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.18  E-value=0.00045  Score=61.81  Aligned_cols=74  Identities=24%  Similarity=0.302  Sum_probs=53.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCC----------------------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK----------------------  138 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d----------------------  138 (269)
                      +.+++|+|+|+ |.+|..+++.+...|.+|++.+|++.+... ....+..++..|..+                      
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~-~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~  247 (384)
T 1l7d_A          170 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQ-VESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  247 (384)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHH-HHHTTCEECCC-----------------------CCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHcCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence            56789999995 999999999999999999999998665433 233555544222211                      


Q ss_pred             CCcHHHHhcCccEEEEcC
Q 024290          139 PETIPATLVGVHTVIDCA  156 (269)
Q Consensus       139 ~~~l~~~~~~~d~vi~~a  156 (269)
                      .+.+.+.+.++|+||+++
T Consensus       248 ~~~l~~~~~~aDvVi~~~  265 (384)
T 1l7d_A          248 AEAVLKELVKTDIAITTA  265 (384)
T ss_dssp             HHHHHHHHTTCSEEEECC
T ss_pred             HHHHHHHhCCCCEEEECC
Confidence            112667778999999988

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=97.18  E-value=0.0015  Score=58.36  Aligned_cols=71  Identities=20%  Similarity=0.265  Sum_probs=55.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      .+.+|+|+|+|+ |.+|+.+++.+.+.|++|++++.++.......   .-..+..|+.|.+.+.++++.+|+|..
T Consensus        11 ~~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~---ad~~~~~~~~d~~~l~~~~~~~dvI~~   81 (389)
T 3q2o_A           11 ILPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV---ADIEIVASYDDLKAIQHLAEISDVVTY   81 (389)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT---CSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh---CCceEecCcCCHHHHHHHHHhCCEeee
Confidence            367889999995 88999999999999999999987654332211   224567888888889898888998854

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=97.18  E-value=0.00093  Score=57.55  Aligned_cols=37  Identities=22%  Similarity=0.293  Sum_probs=33.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA  119 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~  119 (269)
                      .+++|.|+|+ |.+|..++..|++.|++|++++|+++.
T Consensus        14 ~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~   50 (302)
T 1f0y_A           14 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI   50 (302)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            4578999996 999999999999999999999998654

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.18  E-value=0.00036  Score=58.40  Aligned_cols=70  Identities=23%  Similarity=0.309  Sum_probs=48.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC--------------CccccccCCCEEEEcCCCCCCcHHHH
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA--------------PADFLRDWGATVVNADLSKPETIPAT  145 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~--------------~~~~~~~~~~~~i~~Dl~d~~~l~~~  145 (269)
                      .+.+++|.|+| .|.+|.++++.|++.|++|++.+|++++              ..+.....+..       ...+..++
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~e~   87 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHV-------HLAAFADV   87 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTC-------EEEEHHHH
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCce-------eccCHHHH
Confidence            46778999998 7999999999999999999999998654              11111111111       12345667


Q ss_pred             hcCccEEEEcCC
Q 024290          146 LVGVHTVIDCAT  157 (269)
Q Consensus       146 ~~~~d~vi~~ag  157 (269)
                      ++++|+||.+..
T Consensus        88 ~~~aDvVilavp   99 (245)
T 3dtt_A           88 AAGAELVVNATE   99 (245)
T ss_dssp             HHHCSEEEECSC
T ss_pred             HhcCCEEEEccC
Confidence            778999998875

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.18  E-value=0.00048  Score=60.19  Aligned_cols=102  Identities=16%  Similarity=0.149  Sum_probs=65.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccc---ccc------CCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF---LRD------WGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~---~~~------~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      ++||.|+|+ |.+|..++..|+..|+ +|+++++++++....   +.+      ....+..     ..+. ++++++|+|
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-----t~d~-~al~~aD~V   76 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-----SNTY-DDLAGADVV   76 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-----ECCG-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-----CCCH-HHhCCCCEE
Confidence            468999997 9999999999999998 999999876543211   111      0111211     1223 567899999


Q ss_pred             EEcCCCCC----------CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          153 IDCATGRP----------EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       153 i~~ag~~~----------~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      |.++|...          ..+....|..-.+.+++.+.+.... .+|.+|
T Consensus        77 i~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           77 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99997421          1223345566667777777766533 444443

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.17  E-value=0.00028  Score=62.69  Aligned_cols=74  Identities=19%  Similarity=0.260  Sum_probs=53.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+.+|||+|+ |.+|...++.+...|++|+++++++++.. .+++.++..+ .|..+.+.+.++..++|+||+++|.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~-~a~~lGa~~v-i~~~~~~~~~~~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKALGADEV-VNSRNADEMAAHLKSFDFILNTVAA  267 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHTCSEE-EETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCcEE-eccccHHHHHHhhcCCCEEEECCCC
Confidence            4679999997 88999999999899999999998765433 2334454432 3555544444444689999999984

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.16  E-value=0.00045  Score=60.48  Aligned_cols=102  Identities=16%  Similarity=0.089  Sum_probs=65.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccc---ccc------CCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF---LRD------WGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~---~~~------~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      ++||.|+|| |.+|..++..|+..|+ +|++.+++++.....   +.+      ....+..     ..++ ++++++|+|
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-----t~d~-~al~~aD~V   86 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-----ENNY-EYLQNSDVV   86 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-----ESCG-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-----CCCH-HHHCCCCEE
Confidence            468999997 9999999999999998 999999986543321   111      0111111     1223 467899999


Q ss_pred             EEcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          153 IDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       153 i~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      |.++|...     ..+....|..-.+.+++.+.+.... .+|++|
T Consensus        87 I~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           87 IITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             EECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99997422     1233345666677777777765434 344443

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=97.16  E-value=0.00094  Score=58.54  Aligned_cols=91  Identities=25%  Similarity=0.213  Sum_probs=53.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEE---EEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVR---CLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~---~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      +||.|.||+|.+|+.+++.|.++++++.   .+......... +.-.+......+. +++.    + ++|+||.|.|   
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~-l~~~g~~i~v~~~-~~~~----~-~~DvV~~a~g---   70 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVR-LAFRGEEIPVEPL-PEGP----L-PVDLVLASAG---   70 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCE-EEETTEEEEEEEC-CSSC----C-CCSEEEECSH---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCE-EEEcCceEEEEeC-Chhh----c-CCCEEEECCC---
Confidence            4799999999999999999998776543   22211111111 1111111111222 2332    3 8999999987   


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                              ...+........+.|+ ++|-.|+.
T Consensus        71 --------~~~s~~~a~~~~~~G~-~vId~s~~   94 (331)
T 2yv3_A           71 --------GGISRAKALVWAEGGA-LVVDNSSA   94 (331)
T ss_dssp             --------HHHHHHHHHHHHHTTC-EEEECSSS
T ss_pred             --------ccchHHHHHHHHHCCC-EEEECCCc
Confidence                    2233445566667776 77777775

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.16  E-value=0.001  Score=59.05  Aligned_cols=99  Identities=16%  Similarity=0.202  Sum_probs=63.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCC-CCcHHHHh-----cCccEEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSK-PETIPATL-----VGVHTVID  154 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d-~~~l~~~~-----~~~d~vi~  154 (269)
                      .+.+|+|+|+ |.+|..+++.+...|. +|+++++++++.. .+++.++..+ .|..+ .+++.+.+     .++|+||+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~-~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~vid  267 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFA-KAKEVGATEC-VNPQDYKKPIQEVLTEMSNGGVDFSFE  267 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHTTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHhCCceE-ecccccchhHHHHHHHHhCCCCcEEEE
Confidence            4679999995 9999999999999998 7999988765433 3445565433 35554 23343332     26999999


Q ss_pred             cCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          155 CATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       155 ~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      ++|..          ......++.++.. .+++|.++...
T Consensus       268 ~~g~~----------~~~~~~~~~l~~~-~G~iv~~G~~~  296 (374)
T 2jhf_A          268 VIGRL----------DTMVTALSCCQEA-YGVSVIVGVPP  296 (374)
T ss_dssp             CSCCH----------HHHHHHHHHBCTT-TCEEEECSCCC
T ss_pred             CCCCH----------HHHHHHHHHhhcC-CcEEEEeccCC
Confidence            99831          1112233333332 15898887543

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.15  E-value=0.0029  Score=54.24  Aligned_cols=74  Identities=16%  Similarity=0.267  Sum_probs=45.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEE-eCCCCC-C-ccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDE-GYDVRCL-VRPRPA-P-ADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~-~R~~~~-~-~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ++.||.|.|++|.+|+.+++.+.+. +.++++. +|+.+. . .+.-+-.++.  ..++.-.+++.+++.++|+||.++.
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~--~~gv~v~~dl~~ll~~aDVvIDFT~   97 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSD--FLGVRITDDPESAFSNTEGILDFSQ   97 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCS--CCSCBCBSCHHHHTTSCSEEEECSC
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccC--cCCceeeCCHHHHhcCCCEEEEcCC
Confidence            3468999999999999999998865 6787776 454322 1 1110101111  1222223567777778888887764

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.14  E-value=0.0028  Score=54.55  Aligned_cols=65  Identities=25%  Similarity=0.353  Sum_probs=42.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      +||-++| -|.+|..+++.|++.||+|++.+|++++..++ .+.++..       .+++.+++++.|+||-+..
T Consensus         6 ~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l-~~~G~~~-------~~s~~e~~~~~dvvi~~l~   70 (297)
T 4gbj_A            6 EKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPL-TKLGATV-------VENAIDAITPGGIVFSVLA   70 (297)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTT-TTTTCEE-------CSSGGGGCCTTCEEEECCS
T ss_pred             CcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCeE-------eCCHHHHHhcCCceeeecc
Confidence            5899998 79999999999999999999999987765543 3334332       2344556667777777664

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.14  E-value=0.00047  Score=58.93  Aligned_cols=65  Identities=14%  Similarity=0.240  Sum_probs=48.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |+|.|+| .|.+|..+++.|++.|++|++.+|++++..+. .+.++.       -.+++.++++++|+||.+..
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~-------~~~~~~~~~~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEEL-AALGAE-------RAATPCEVVESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHH-HHTTCE-------ECSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH-HHCCCe-------ecCCHHHHHhcCCEEEEEcC
Confidence            6899999 59999999999999999999999987654432 222332       13455666667788887764

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=97.14  E-value=0.003  Score=55.07  Aligned_cols=117  Identities=11%  Similarity=0.037  Sum_probs=75.6

Q ss_pred             CCCEEEEECCCcHHHHH-HHHHHHHCCCeEEEEeCCCCC-CccccccCCCEEEEcCCCCCCcHHHHh-cCccEEEEcCCC
Q 024290           82 RPTSILVVGATGTLGRQ-IVRRALDEGYDVRCLVRPRPA-PADFLRDWGATVVNADLSKPETIPATL-VGVHTVIDCATG  158 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~-l~~~Ll~~G~~V~~~~R~~~~-~~~~~~~~~~~~i~~Dl~d~~~l~~~~-~~~d~vi~~ag~  158 (269)
                      .+|+|.|+|. |++|.. +++.|+++|++|.+.+++... ..+.+++.++.+..+.  +++.   +. .++|.||...|.
T Consensus         3 ~~~~i~~iGi-Gg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~--~~~~---l~~~~~d~vV~Spgi   76 (326)
T 3eag_A            3 AMKHIHIIGI-GGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGF--DAAQ---LDEFKADVYVIGNVA   76 (326)
T ss_dssp             CCCEEEEESC-CSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESC--CGGG---GGSCCCSEEEECTTC
T ss_pred             CCcEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCC--CHHH---cCCCCCCEEEECCCc
Confidence            3578999995 788885 999999999999999987542 2334566688877652  2332   33 468999999886


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCC----------------CeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGI----------------QKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v----------------~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                      .+....           ++++++.|+                .++|-++-.       +.=..++..+..+++..|.+..
T Consensus        77 ~~~~p~-----------~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGT-------nGKTTTt~ll~~iL~~~g~~~~  138 (326)
T 3eag_A           77 KRGMDV-----------VEAILNLGLPYISGPQWLSENVLHHHWVLGVAGT-------HGKTTTASMLAWVLEYAGLAPG  138 (326)
T ss_dssp             CTTCHH-----------HHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESS-------SCHHHHHHHHHHHHHHTTCCCE
T ss_pred             CCCCHH-----------HHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECC-------CCHHHHHHHHHHHHHHcCCCce
Confidence            544322           122222222                244444322       2234567788888888887754

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.12  E-value=0.0013  Score=58.34  Aligned_cols=70  Identities=21%  Similarity=0.257  Sum_probs=54.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      ||+|+|+|+ |.+|+.+++.|.+.|++|++++.++......+   .-..+..|+.|.+.+.++..++|+|+...
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~---~~~~~~~~~~d~~~l~~~~~~~d~v~~~~   70 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQV---ADEQIVAGFFDSERIEDLVKGSDVTTYDL   70 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGG---SSEEEECCTTCHHHHHHHHHTCSEEEESC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh---CceEEECCCCCHHHHHHHHhcCCEEEecc
Confidence            478999996 79999999999999999999987654322211   12456789988888888888899988643

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.12  E-value=0.0021  Score=57.38  Aligned_cols=97  Identities=13%  Similarity=0.166  Sum_probs=57.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEe-CCCCCCccc------ccc-------CCCEEEEcCCCCCCcHHH
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLV-RPRPAPADF------LRD-------WGATVVNADLSKPETIPA  144 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~-R~~~~~~~~------~~~-------~~~~~i~~Dl~d~~~l~~  144 (269)
                      .|++++|.|.||||++|..+++.|.+.. .++..+. .+.+.....      +..       ....+...|  +.+    
T Consensus        16 ~M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~--~~~----   89 (381)
T 3hsk_A           16 HMSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECK--PEG----   89 (381)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESS--SCT----
T ss_pred             cCCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCc--hhh----
Confidence            4677899999999999999999888765 4776553 222221111      000       011222222  111    


Q ss_pred             HhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       145 ~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      .+.++|+||.|.+           -.....+...+.+.|+ ++|=.|+..
T Consensus        90 ~~~~~Dvvf~alp-----------~~~s~~~~~~~~~~G~-~VIDlSa~f  127 (381)
T 3hsk_A           90 NFLECDVVFSGLD-----------ADVAGDIEKSFVEAGL-AVVSNAKNY  127 (381)
T ss_dssp             TGGGCSEEEECCC-----------HHHHHHHHHHHHHTTC-EEEECCSTT
T ss_pred             hcccCCEEEECCC-----------hhHHHHHHHHHHhCCC-EEEEcCCcc
Confidence            2467999999987           2233556667777786 677777653

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.12  E-value=0.0012  Score=57.70  Aligned_cols=103  Identities=9%  Similarity=0.105  Sum_probs=67.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccc---ccc-----CCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADF---LRD-----WGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~---~~~-----~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      .+.+||.|+|+ |.+|..++-.|+..+.  ++++++++.++....   +.+     ..+.+.. |  +    .++++++|
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aD   78 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDAD   78 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCC
Confidence            34579999998 9999999999988875  899999865432110   111     1233332 2  1    44578999


Q ss_pred             EEEEcCCCCCC-----ccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          151 TVIDCATGRPE-----EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       151 ~vi~~ag~~~~-----~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      +||..++....     .+....|....+.+++.+.+.... .+|.+|
T Consensus        79 vVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             EEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            99999985322     234456667777788888777544 455553

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.12  E-value=0.00032  Score=62.02  Aligned_cols=75  Identities=20%  Similarity=0.282  Sum_probs=51.7

Q ss_pred             CC-CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC---CccccccCCCEEEEcCCCC---CC---cHHHHh----c
Q 024290           82 RP-TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA---PADFLRDWGATVVNADLSK---PE---TIPATL----V  147 (269)
Q Consensus        82 ~~-~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~---~~~~~~~~~~~~i~~Dl~d---~~---~l~~~~----~  147 (269)
                      .+ .+|+|+||+|.+|...++.+...|++|++++++.++   ..+.+++.++..+ .|..+   .+   .+.++.    .
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~i~~~t~~~~~  244 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV-ITEDQNNSREFGPTIKEWIKQSGG  244 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE-EEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEE-EecCccchHHHHHHHHHHhhccCC
Confidence            46 899999999999999999888899999999876554   1233344555432 23322   12   233332    3


Q ss_pred             CccEEEEcCC
Q 024290          148 GVHTVIDCAT  157 (269)
Q Consensus       148 ~~d~vi~~ag  157 (269)
                      ++|+||+++|
T Consensus       245 g~Dvvid~~G  254 (364)
T 1gu7_A          245 EAKLALNCVG  254 (364)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            6999999998

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.11  E-value=0.00083  Score=57.86  Aligned_cols=101  Identities=11%  Similarity=0.004  Sum_probs=67.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCcc---cccc------CCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPAD---FLRD------WGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~---~~~~------~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      |||.|+|+ |+||+.++-.|+.++  .++++++.+++...-   .+.+      ....+...+  |.    +.+++.|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~----~~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CH----HHhCCCCEE
Confidence            68999995 999999999998887  489999986432110   0111      122333221  12    346799999


Q ss_pred             EEcCCCC-----CCccchhhcHHHHHHHHHHHHHcCCCeE-EEec
Q 024290          153 IDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQKY-VFYS  191 (269)
Q Consensus       153 i~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v~r~-V~~S  191 (269)
                      |..||..     ...+.++.|..-.+.+.+.+.+...+-+ +.+|
T Consensus        74 vitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            9999942     2345667888888889999988765544 4444

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.10  E-value=0.00031  Score=61.74  Aligned_cols=72  Identities=15%  Similarity=0.214  Sum_probs=51.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~a  156 (269)
                      .+.+|+|+||+|.+|...++.+...|++|+++++++++. +.+++.++..+ .|..+  ++.+.+     .++|+||+|+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~lGa~~v-i~~~~--~~~~~~~~~~~~g~Dvv~d~~  225 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI-EWTKKMGADIV-LNHKE--SLLNQFKTQGIELVDYVFCTF  225 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHH-HHHHHHTCSEE-ECTTS--CHHHHHHHHTCCCEEEEEESS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhcCCcEE-EECCc--cHHHHHHHhCCCCccEEEECC
Confidence            578999999999999999999999999999999865443 22333454433 34433  232222     3689999999


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      |
T Consensus       226 g  226 (346)
T 3fbg_A          226 N  226 (346)
T ss_dssp             C
T ss_pred             C
Confidence            8

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.10  E-value=0.001  Score=57.44  Aligned_cols=96  Identities=17%  Similarity=0.261  Sum_probs=60.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC---
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR---  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~---  159 (269)
                      |+||-++| -|..|..+++.|++.||+|++.+|++++...+ .+.++..       .+++.++.+++|+||-|....   
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l-~~~Ga~~-------a~s~~e~~~~~dvv~~~l~~~~~v   73 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGL-VAAGASA-------ARSARDAVQGADVVISMLPASQHV   73 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHH-HHTTCEE-------CSSHHHHHTTCSEEEECCSCHHHH
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHH-HHcCCEE-------cCCHHHHHhcCCceeecCCchHHH
Confidence            57899999 79999999999999999999999986554332 2223221       234445555555555554310   


Q ss_pred             ---------------CCcc---chhhcHHHHHHHHHHHHHcCCCeEE
Q 024290          160 ---------------PEEP---IKKVDWEGKVALIQCAKAMGIQKYV  188 (269)
Q Consensus       160 ---------------~~~~---~~~~n~~~~~~li~a~~~~~v~r~V  188 (269)
                                     +...   .-.+....++.+.+.+++.|+ +||
T Consensus        74 ~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~-~~l  119 (300)
T 3obb_A           74 EGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL-AML  119 (300)
T ss_dssp             HHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTC-EEE
T ss_pred             HHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC-EEE
Confidence                           0000   112456667778888887775 444

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.10  E-value=0.0016  Score=55.59  Aligned_cols=57  Identities=16%  Similarity=0.230  Sum_probs=46.6

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .++.+++++|+|+++.+|+.++..|+++|..|+++.+..                      .++.+.+..+|+||...|
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t----------------------~~L~~~~~~ADIVI~Avg  212 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT----------------------KDLSLYTRQADLIIVAAG  212 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------SCHHHHHTTCSEEEECSS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHHhhcCCEEEECCC
Confidence            358899999999999999999999999999999987753                      235566667777777766

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=97.09  E-value=0.0011  Score=59.70  Aligned_cols=71  Identities=21%  Similarity=0.259  Sum_probs=56.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      |.+++|+|+|+ |.+|+.+++.+.+.|++|++++ .+........+ ....+.+|+.|.+.+.++.+.+|+|+.
T Consensus        22 m~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad-~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           22 WNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQISA-HDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCC-SSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhcc-ccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            45789999995 8999999999999999999999 65443332222 124577899999999999999998874

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.09  E-value=0.00094  Score=57.42  Aligned_cols=98  Identities=17%  Similarity=0.278  Sum_probs=63.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCC---Ccc------------------ccc----cCCCEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPA---PAD------------------FLR----DWGATVVNA  134 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~---~~~------------------~~~----~~~~~~i~~  134 (269)
                      +..++|+|+|+ |++|..+++.|+..|. ++++++.+.-.   +..                  .+.    ...++.+..
T Consensus        34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~  112 (292)
T 3h8v_A           34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY  112 (292)
T ss_dssp             GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred             HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence            56789999995 9999999999999995 78888875311   100                  000    112444555


Q ss_pred             CCCCCCcHHHHh-----------cCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          135 DLSKPETIPATL-----------VGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       135 Dl~d~~~l~~~~-----------~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                      ++++.+.+..++           +++|+||++..          |+..-..+-++|.+.++ .+|+.
T Consensus       113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D----------n~~~R~~in~~c~~~~~-Pli~~  168 (292)
T 3h8v_A          113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD----------NFEARMTINTACNELGQ-TWMES  168 (292)
T ss_dssp             CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS----------SHHHHHHHHHHHHHHTC-CEEEE
T ss_pred             cCCcHHHHHHHhhhhcccccccCCCCCEEEECCc----------chhhhhHHHHHHHHhCC-CEEEe
Confidence            665545555554           57899998873          34444556777887775 45543

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.09  E-value=0.0014  Score=55.04  Aligned_cols=98  Identities=14%  Similarity=0.235  Sum_probs=61.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccc----------------------ccc--CCCE--EEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF----------------------LRD--WGAT--VVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~----------------------~~~--~~~~--~i~  133 (269)
                      +..++|+|.|+ |++|.++++.|+..|. ++++++++.-....+                      +.+  ..++  .+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            55679999996 8899999999999996 778877653111000                      000  1233  333


Q ss_pred             cCCCCCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          134 ADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      .+++ .+.+.++++++|+||++..          |...-..+-++|.+.++ .+|..+
T Consensus       105 ~~~~-~~~~~~~~~~~DvVi~~~d----------~~~~r~~l~~~~~~~~~-p~i~~~  150 (251)
T 1zud_1          105 QRLT-GEALKDAVARADVVLDCTD----------NMATRQEINAACVALNT-PLITAS  150 (251)
T ss_dssp             SCCC-HHHHHHHHHHCSEEEECCS----------SHHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             ccCC-HHHHHHHHhcCCEEEECCC----------CHHHHHHHHHHHHHhCC-CEEEEe
Confidence            3333 3456777888999999864          23333456677777765 455544

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.08  E-value=0.0011  Score=57.50  Aligned_cols=99  Identities=16%  Similarity=0.090  Sum_probs=63.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCcccccc---------CCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFLRD---------WGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~~~---------~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      |+|.|+| +|.+|..++..|++.|  ++|++++|+++.......+         ..+.....   |   . +.++++|+|
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d---~-~~~~~aDvV   73 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---D---W-AALADADVV   73 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---C---G-GGGTTCSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---C---H-HHhCCCCEE
Confidence            6899999 7999999999999999  7999999975433221110         11222222   2   2 456789999


Q ss_pred             EEcCCCCCC---------ccchhhcHHHHHHHHHHHHHcCCC-eEEEe
Q 024290          153 IDCATGRPE---------EPIKKVDWEGKVALIQCAKAMGIQ-KYVFY  190 (269)
Q Consensus       153 i~~ag~~~~---------~~~~~~n~~~~~~li~a~~~~~v~-r~V~~  190 (269)
                      |.+++....         .+....|......+++.+.+.... .+|.+
T Consensus        74 iiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~  121 (309)
T 1hyh_A           74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI  121 (309)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             EEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence            999875321         123345666666777777765433 34443

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=97.08  E-value=0.00028  Score=59.61  Aligned_cols=69  Identities=16%  Similarity=0.286  Sum_probs=48.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~-V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      +.+|+|.|+|+ |.+|..+++.|.+.|++ |.+.+|+++...+..+..++...       +++.++++++|+||.+..
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~~~~Dvvi~av~   77 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT-------TDLAEVNPYAKLYIVSLK   77 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE-------SCGGGSCSCCSEEEECCC
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee-------CCHHHHhcCCCEEEEecC
Confidence            33468999995 99999999999999998 88888876544333233344321       233445667899998875

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.08  E-value=0.0006  Score=58.69  Aligned_cols=65  Identities=14%  Similarity=0.137  Sum_probs=49.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      +++|.|+| .|.+|..+++.|++.|++|++.+|++++..... +.++..       .+++.++++ +|+||.+..
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~-------~~~~~~~~~-aDvvi~~vp   79 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLA-EAGATL-------ADSVADVAA-ADLIHITVL   79 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHH-HTTCEE-------CSSHHHHTT-SSEEEECCS
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HCCCEE-------cCCHHHHHh-CCEEEEECC
Confidence            46899998 699999999999999999999999877655432 223321       345666777 888888765

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.07  E-value=0.00087  Score=58.31  Aligned_cols=72  Identities=28%  Similarity=0.324  Sum_probs=49.8

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCC--CcHHHHh-cCccEEEEcCCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP--ETIPATL-VGVHTVIDCATG  158 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~--~~l~~~~-~~~d~vi~~ag~  158 (269)
                      +|+|+|++|.+|..+++.+...|++|+++++++++.. .+++.++..+ .|..+.  +.+.++- .++|+||+++|.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~-~~~~lGa~~~-i~~~~~~~~~~~~~~~~~~d~vid~~g~  226 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD-YLRVLGAKEV-LAREDVMAERIRPLDKQRWAAAVDPVGG  226 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH-HHHHTTCSEE-EECC---------CCSCCEEEEEECSTT
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHcCCcEE-EecCCcHHHHHHHhcCCcccEEEECCcH
Confidence            7999999999999999999999999999999865543 3444565433 344443  1222222 368999999984

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.07  E-value=0.00067  Score=59.49  Aligned_cols=95  Identities=15%  Similarity=0.138  Sum_probs=62.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDC  155 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~  155 (269)
                      .+.+|+|+|+ |.+|..+++.+...|+ +|+++++++++.. .+++. +.. ..|..+.+ +.+.+     .++|+||++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~-~~~~l-a~~-v~~~~~~~-~~~~~~~~~~~g~D~vid~  238 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA-FARPY-ADR-LVNPLEED-LLEVVRRVTGSGVEVLLEF  238 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG-GGTTT-CSE-EECTTTSC-HHHHHHHHHSSCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHh-HHh-ccCcCccC-HHHHHHHhcCCCCCEEEEC
Confidence            6789999999 9999999999999999 9999998754432 22333 322 24665533 33322     368999999


Q ss_pred             CCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       156 ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      +|..          ......++.++..  +++|.++..
T Consensus       239 ~g~~----------~~~~~~~~~l~~~--G~iv~~g~~  264 (343)
T 2dq4_A          239 SGNE----------AAIHQGLMALIPG--GEARILGIP  264 (343)
T ss_dssp             SCCH----------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred             CCCH----------HHHHHHHHHHhcC--CEEEEEecC
Confidence            9831          1223344444433  488888764

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=97.06  E-value=0.0045  Score=53.11  Aligned_cols=111  Identities=18%  Similarity=0.103  Sum_probs=68.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP  160 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~~  160 (269)
                      .++|+|.|++|..|+.+++.|.+.|++++.... +....+  +..++.+       ..++.++.+  ++|++|.+..   
T Consensus         7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~Vn-P~~~g~--~i~G~~v-------y~sl~el~~~~~~Dv~Ii~vp---   73 (288)
T 1oi7_A            7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVT-PGKGGM--EVLGVPV-------YDTVKEAVAHHEVDASIIFVP---   73 (288)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC-TTCTTC--EETTEEE-------ESSHHHHHHHSCCSEEEECCC---
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEEC-CCCCCc--eECCEEe-------eCCHHHHhhcCCCCEEEEecC---
Confidence            468999999999999999999999998653333 222111  0112221       234566665  7899987764   


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                              -..+..+++.|.+.|++.+|.+++.- ..       .....+.++.++.++++.
T Consensus        74 --------~~~~~~~~~ea~~~Gi~~vVi~t~G~-~~-------~~~~~l~~~a~~~gi~vi  119 (288)
T 1oi7_A           74 --------APAAADAALEAAHAGIPLIVLITEGI-PT-------LDMVRAVEEIKALGSRLI  119 (288)
T ss_dssp             --------HHHHHHHHHHHHHTTCSEEEECCSCC-CH-------HHHHHHHHHHHHHTCEEE
T ss_pred             --------HHHHHHHHHHHHHCCCCEEEEECCCC-CH-------HHHHHHHHHHHHcCCEEE
Confidence                    34456677788888887677666421 10       113344555666666443

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.04  E-value=0.00058  Score=62.42  Aligned_cols=75  Identities=23%  Similarity=0.354  Sum_probs=53.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCC--------------------C
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP--------------------E  140 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~--------------------~  140 (269)
                      ..+.+|+|+||+|.+|...++.+...|.+|+++++++++. +.+++.++..+ .|..+.                    +
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~-~~~~~lGa~~v-i~~~~~d~~~~~~~~~~~~~~~~~~~~  304 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA-EICRAMGAEAI-IDRNAEGYRFWKDENTQDPKEWKRFGK  304 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHHTCCEE-EETTTTTCCSEEETTEECHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHH-HHHHhhCCcEE-EecCcCcccccccccccchHHHHHHHH
Confidence            3567999999999999999999999999999999865443 33444555433 233332                    2


Q ss_pred             cHHHHh--cCccEEEEcCC
Q 024290          141 TIPATL--VGVHTVIDCAT  157 (269)
Q Consensus       141 ~l~~~~--~~~d~vi~~ag  157 (269)
                      .+.++.  .++|+||+++|
T Consensus       305 ~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          305 RIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHhCCCCCcEEEEcCC
Confidence            333333  37999999998

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.04  E-value=0.0013  Score=58.26  Aligned_cols=74  Identities=20%  Similarity=0.268  Sum_probs=53.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHH---Hh-cCccEEEEcC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA---TL-VGVHTVIDCA  156 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~---~~-~~~d~vi~~a  156 (269)
                      ..+.+|+|+||+|.+|...++.+...|++|+++. +++ ..+.+++.++..+ .|..+.+..+.   +. .++|+||+++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~-~~~~~~~lGa~~v-i~~~~~~~~~~v~~~t~g~~d~v~d~~  239 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPH-NFDLAKSRGAEEV-FDYRAPNLAQTIRTYTKNNLRYALDCI  239 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGG-GHHHHHHTTCSEE-EETTSTTHHHHHHHHTTTCCCEEEESS
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHH-HHHHHHHcCCcEE-EECCCchHHHHHHHHccCCccEEEECC
Confidence            3567899999999999999999999999999886 333 3344556666433 35555443222   22 3589999999


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      |
T Consensus       240 g  240 (371)
T 3gqv_A          240 T  240 (371)
T ss_dssp             C
T ss_pred             C
Confidence            8

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.03  E-value=0.00039  Score=60.03  Aligned_cols=68  Identities=19%  Similarity=0.128  Sum_probs=45.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ++|+|.|+| .|.+|..+++.|++.|++|++.+|++++.... .+.+......      ++.++++++|+||.+..
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~~~------~~~e~~~~aDvvi~~vp   73 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANL-LAEGACGAAA------SAREFAGVVDALVILVV   73 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCSEEES------SSTTTTTTCSEEEECCS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH-HHcCCccccC------CHHHHHhcCCEEEEECC
Confidence            346899998 69999999999999999999999986543332 2223322111      22233455677766654

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.03  E-value=0.0025  Score=55.40  Aligned_cols=101  Identities=13%  Similarity=0.185  Sum_probs=64.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccc---ccc----C--CCEEEEcCCCCCCcHHHHhcCcc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADF---LRD----W--GATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~---~~~----~--~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      +++||.|+|+ |.+|..++..|+..|.  +|++++++++.....   +.+    .  .+.+.. |  +    .+.++++|
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~aD   76 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDAD   76 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTCS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCCC
Confidence            4579999998 9999999999988774  899999975422110   000    0  223221 1  1    34578999


Q ss_pred             EEEEcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCCe-EEEe
Q 024290          151 TVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQK-YVFY  190 (269)
Q Consensus       151 ~vi~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r-~V~~  190 (269)
                      +||.+++...     ..+....|..-...+++.+.+....- ++.+
T Consensus        77 vViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~  122 (316)
T 1ldn_A           77 LVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVA  122 (316)
T ss_dssp             EEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             EEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEe
Confidence            9999998432     22334556666677888877765443 4443

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.03  E-value=0.0044  Score=54.13  Aligned_cols=102  Identities=16%  Similarity=0.057  Sum_probs=69.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccc---ccc-----CCCEEE-EcCCCCCCcHHHHhcCcc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADF---LRD-----WGATVV-NADLSKPETIPATLVGVH  150 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~---~~~-----~~~~~i-~~Dl~d~~~l~~~~~~~d  150 (269)
                      ..+||.|+|+ |.+|..++..|+..|.  +|+++++++++....   +.+     ....++ ..|+   +    .++++|
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~---~----~~~daD   91 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY---S----VSAGSK   91 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS---C----SCSSCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH---H----HhCCCC
Confidence            4578999998 9999999999999986  899999865432110   110     112222 2232   2    267899


Q ss_pred             EEEEcCCCC-----CCccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          151 TVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       151 ~vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      +||.++|..     ...+....|..-.+.+++.+.+.... .++.+|
T Consensus        92 iVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           92 LVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             EEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence            999999842     23456677888888888888877544 455555

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.03  E-value=0.0082  Score=52.75  Aligned_cols=93  Identities=19%  Similarity=0.167  Sum_probs=56.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~---~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      +++|.|.||||++|..|++.|.++.+   ++..+.......... .-.+.....-|+.+ +    .+.++|+||.|++  
T Consensus         1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~-~~~~~~~~~~~~~~-~----~~~~~Dvvf~a~~--   72 (344)
T 3tz6_A            1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKL-AFRGQEIEVEDAET-A----DPSGLDIALFSAG--   72 (344)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEE-EETTEEEEEEETTT-S----CCTTCSEEEECSC--
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCce-eecCCceEEEeCCH-H----HhccCCEEEECCC--
Confidence            35899999999999999999988743   466665433222111 11121222222222 2    2468999999987  


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                               -..+....+.+.+.|+ ++|=.|+.
T Consensus        73 ---------~~~s~~~a~~~~~~G~-~vID~Sa~   96 (344)
T 3tz6_A           73 ---------SAMSKVQAPRFAAAGV-TVIDNSSA   96 (344)
T ss_dssp             ---------HHHHHHHHHHHHHTTC-EEEECSST
T ss_pred             ---------hHHHHHHHHHHHhCCC-EEEECCCc
Confidence                     2233456666667776 67777764

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.02  E-value=0.0017  Score=56.56  Aligned_cols=100  Identities=10%  Similarity=0.125  Sum_probs=66.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCcc---cccc-----CCCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPAD---FLRD-----WGATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~---~~~~-----~~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      +||.|+|+ |.+|..++-.|+..+.  +++++++++++...   .+.+     ..+++.. |  +    .++++++|+||
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvVi   77 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLVV   77 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            68999998 9999999999998875  89999986543221   0111     1233332 2  1    45578999999


Q ss_pred             EcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          154 DCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       154 ~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      .+++...     ..+....|....+.+++.+.+.... .+|.+|
T Consensus        78 i~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           78 ITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             ECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            9998422     2245567777888888888887644 455543

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.01  E-value=0.0013  Score=57.19  Aligned_cols=100  Identities=15%  Similarity=0.110  Sum_probs=63.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCcccccc--------CCCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRD--------WGATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~~~--------~~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      |+|.|+|+ |.+|..++..|+..|+  +|++++++++.......+        ....+..   +|.    +.++++|+||
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~----~~~~~aDvVi   72 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDY----ADLKGSDVVI   72 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCH----HHhCCCCEEE
Confidence            47999997 9999999999999998  999999975433221100        0122221   222    3467899999


Q ss_pred             EcCCCCCC-----ccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          154 DCATGRPE-----EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       154 ~~ag~~~~-----~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      .+++....     .+....|......+++.+.+.... .+|.++
T Consensus        73 iav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99985332     123334555667777777665433 444443

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.01  E-value=0.0018  Score=58.19  Aligned_cols=74  Identities=18%  Similarity=0.274  Sum_probs=52.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH---h--cCccEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---L--VGVHTVID  154 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~---~--~~~d~vi~  154 (269)
                      ..+.+|||+|+ |.+|...++.+...|+ +|+++++++++. +..++.++..+ .|..+.+..+++   .  .++|+||.
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~~lGa~~v-i~~~~~~~~~~i~~~t~g~g~D~vid  288 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRR-NLAKELGADHV-IDPTKENFVEAVLDYTNGLGAKLFLE  288 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHHHHTCSEE-ECTTTSCHHHHHHHHTTTCCCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHcCCCEE-EcCCCCCHHHHHHHHhCCCCCCEEEE
Confidence            35679999998 9999999999999998 899888865433 23344455433 355554433332   2  26999999


Q ss_pred             cCC
Q 024290          155 CAT  157 (269)
Q Consensus       155 ~ag  157 (269)
                      ++|
T Consensus       289 ~~g  291 (404)
T 3ip1_A          289 ATG  291 (404)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            998

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.00  E-value=0.00035  Score=59.80  Aligned_cols=66  Identities=18%  Similarity=0.250  Sum_probs=47.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |++|.|+| .|.+|..+++.|++.|++|++.+|++++..+..+ .++..       .+++.++++++|+||.+..
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~-------~~~~~~~~~~advvi~~v~   66 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA-LGARQ-------ASSPAEVCAACDITIAMLA   66 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH-HTCEE-------CSCHHHHHHHCSEEEECCS
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCee-------cCCHHHHHHcCCEEEEEcC
Confidence            36799998 6999999999999999999999998765443222 23221       2345566666787777764

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.99  E-value=0.0048  Score=53.55  Aligned_cols=102  Identities=16%  Similarity=0.109  Sum_probs=63.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCcccc---cc------CCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFL---RD------WGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~---~~------~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      +++|.|+|+ |.+|..++..|+..|+ +|++++++++......   ..      ....+..     ..++ +.++++|+|
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d~-~a~~~aDiV   76 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-----TDDY-ADISGSDVV   76 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-----ESCG-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-----CCCH-HHhCCCCEE
Confidence            368999997 9999999999999998 9999999865433210   00      0111111     0223 457789999


Q ss_pred             EEcCCCCCC-----ccchhhcHHHHHHHHHHHHHcCCC-eEEEec
Q 024290          153 IDCATGRPE-----EPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS  191 (269)
Q Consensus       153 i~~ag~~~~-----~~~~~~n~~~~~~li~a~~~~~v~-r~V~~S  191 (269)
                      |.+++....     .+....|....+.+++.+.+.... .+|.+|
T Consensus        77 i~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~s  121 (317)
T 2ewd_A           77 IITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICIT  121 (317)
T ss_dssp             EECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            999973221     122234555566677777665433 344444

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=96.98  E-value=0.0026  Score=54.12  Aligned_cols=98  Identities=14%  Similarity=0.247  Sum_probs=62.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-C----cccc----------------------ccCCC-EE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-P----ADFL----------------------RDWGA-TV  131 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~----~~~~----------------------~~~~~-~~  131 (269)
                      .+.+|+|||+|+ |-+|...++.|++.|++|++++..... .    ..+.                      ...++ ++
T Consensus        10 ~l~~k~VLVVGg-G~va~rka~~Ll~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~   88 (274)
T 1kyq_A           10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYEY   88 (274)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCCSEE
T ss_pred             EcCCCEEEEECC-cHHHHHHHHHHHhCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCeeEE
Confidence            467899999995 899999999999999999999865321 1    1111                      12245 66


Q ss_pred             EEcCCCCCCcHH---HHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHc-CCCeEEEe
Q 024290          132 VNADLSKPETIP---ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAM-GIQKYVFY  190 (269)
Q Consensus       132 i~~Dl~d~~~l~---~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~  190 (269)
                      +..++.+ +++.   + .+++|.||-+.+.          -.-...+.+.|++. |++..|++
T Consensus        89 i~~~~~~-~dL~~l~~-~~~adlViaat~d----------~~~n~~I~~~Ar~~f~~~i~VNv  139 (274)
T 1kyq_A           89 IRSDFKD-EYLDLENE-NDAWYIIMTCIPD----------HPESARIYHLCKERFGKQQLVNV  139 (274)
T ss_dssp             ECSSCCG-GGGCCSST-TCCEEEEEECCSC----------HHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             EcCCCCH-HHHhhccc-CCCeEEEEEcCCC----------hHHHHHHHHHHHHhcCCCcEEEE
Confidence            6665542 2221   1 2378988877651          11234577777775 44445543

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=96.98  E-value=0.00044  Score=57.83  Aligned_cols=66  Identities=12%  Similarity=0.201  Sum_probs=48.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC----eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY----DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~----~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      +|+|.|+| .|.+|..+++.|++.|+    +|++.+|++++..+..+..++..       .++..++++++|+||.+.
T Consensus         2 ~~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~-------~~~~~e~~~~aDvVilav   71 (247)
T 3gt0_A            2 DKQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTT-------TTDNNEVAKNADILILSI   71 (247)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEE-------CSCHHHHHHHCSEEEECS
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEE-------eCChHHHHHhCCEEEEEe
Confidence            36899999 79999999999999998    99999998665444322224331       234556667789998887

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.97  E-value=0.00041  Score=61.82  Aligned_cols=75  Identities=23%  Similarity=0.316  Sum_probs=55.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCC------------------CCCCcH
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADL------------------SKPETI  142 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl------------------~d~~~l  142 (269)
                      ..+++|+|+|+ |.+|..+++.+...|.+|++++|++.+... +.+.+.+++..|+                  .+.+.+
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~-~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l  259 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQ-VRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL  259 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHH-HHHTTCEECCCC-------------CHHHHHHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHcCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence            45689999996 999999999999999999999998665433 3335666654332                  012356


Q ss_pred             HHHhcCccEEEEcCC
Q 024290          143 PATLVGVHTVIDCAT  157 (269)
Q Consensus       143 ~~~~~~~d~vi~~ag  157 (269)
                      .++++++|+||.++.
T Consensus       260 ~e~l~~aDIVI~tv~  274 (381)
T 3p2y_A          260 EDAITKFDIVITTAL  274 (381)
T ss_dssp             HHHHTTCSEEEECCC
T ss_pred             HHHHhcCCEEEECCC
Confidence            677889999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	269
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	1e-14
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-14
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-13
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	1e-10
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-09
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	4e-08
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-07
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	6e-07
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	7e-07
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	3e-06
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-06
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	4e-06
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-06
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	7e-06
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	8e-06
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-05
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-05
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	1e-05
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	3e-05
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	5e-05
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	6e-05
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-05
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	6e-05
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	7e-05
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	8e-05
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	8e-05
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	1e-04
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	1e-04
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-04
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-04
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-04
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-04
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-04
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-04
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-04
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-04
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-04
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	5e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	9e-04
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	0.001
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	0.001
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	0.001
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	0.001
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	0.002
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	0.002
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	0.002
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	0.002
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.002
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	0.002
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	0.002
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	0.002
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	0.002
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	0.003
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	0.003
d1vm6a3	128	c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate red	0.003
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	0.003
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	0.003
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	0.003
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	0.004
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.004
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	0.004
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	0.004
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	0.004
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	0.004

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 70.4 bits (171), Expect = 1e-14
 Identities = 28/150 (18%), Positives = 42/150 (28%), Gaps = 10/150 (6%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRP--RPAPADFLRDWGATVVNADLSKP-ETI 142
           I VVGATG  G  ++R A   G+ VR  V         +       T+    L      +
Sbjct: 6   IAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLM 65

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH--NCDKHPE 200
                G H      T +  + I          L   AK  G  ++  YS    +    P 
Sbjct: 66  DTLFEGAHLAFINTTSQAGDEIAIGKD-----LADAAKRAGTIQHYIYSSMPDHSLYGPW 120

Query: 201 VPLMEIKYCTEQFLQDSGLPHVIIRLWPYW 230
             +               L      ++   
Sbjct: 121 PAVPMWAPKFTVENYVRQLGLPSTFVYAGI 150

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (166), Expect = 2e-14
 Identities = 41/175 (23%), Positives = 64/175 (36%), Gaps = 9/175 (5%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I + GATG  G   + +A+  GY+V  LVR   +         A VV  D+ +   +  T
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLVR-DSSRLPSEGPRPAHVVVGDVLQAADVDKT 64

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLME 205
           + G   VI     R +     V  EG   ++   KA G+ K V  +       P      
Sbjct: 65  VAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPR 124

Query: 206 IKYC------TEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIH 254
           ++          + L++SGL +V +   P        T       +G   S  I 
Sbjct: 125 LQAVTDDHIRMHKVLRESGLKYVAVM--PPHIGDQPLTGAYTVTLDGRGPSRVIS 177

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 67.1 bits (162), Expect = 1e-13
 Identities = 27/157 (17%), Positives = 56/157 (35%), Gaps = 16/157 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRP-------RPAPADFLRDWGATVVNADLSK 138
           +L+VG TG +G++IV  ++  G+    L RP       +     + +  GA ++ A L  
Sbjct: 6   VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD 65

Query: 139 PETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH 198
            + +   L  V  VI    G           +   A     +A  I++++          
Sbjct: 66  HQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEA---IKEAGNIKRFLPSEFGMDPDI 122

Query: 199 PE------VPLMEIKYCTEQFLQDSGLPHVIIRLWPY 229
            E            K    + ++ + +P+  +    +
Sbjct: 123 MEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMF 159

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 58.3 bits (139), Expect = 1e-10
 Identities = 28/153 (18%), Positives = 56/153 (36%), Gaps = 10/153 (6%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD--------FLRDWGATVVNADLS 137
           IL++GATG +GR + + +LD G+    LVR   A ++          +  GA +V+  + 
Sbjct: 6   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID 65

Query: 138 KPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK 197
              ++   +  V  VI        E    +    K              +     +    
Sbjct: 66  DHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSE--FGNDVDNVHAV 123

Query: 198 HPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYW 230
            P   + E+K    + ++  G+P+  +    + 
Sbjct: 124 EPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFA 156

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (133), Expect = 1e-09
 Identities = 28/171 (16%), Positives = 57/171 (33%), Gaps = 31/171 (18%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           IL+ G  G +G  +  + + +G++V  +          +  W     N +L   + +   
Sbjct: 4   ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-IGHENFELINHDVVEPL 62

Query: 146 LVGVHTVIDCA-----TGRPEEPIK--KVDWEGKVALIQCAKAMGIQKYVFYS----IHN 194
            + V  +   A           PIK  K +  G + ++  AK +G  + +  S      +
Sbjct: 63  YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGD 121

Query: 195 CDKHPEV--------------PLMEIKYCTEQFLQD----SGLPHVIIRLW 227
            + HP+                  E K   E          G+   + R++
Sbjct: 122 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIF 172

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 50.2 bits (118), Expect = 4e-08
 Identities = 35/143 (24%), Positives = 55/143 (38%)

Query: 83  PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           P  +L+ GATG  G  ++ R L E    + +   R A A+  R        A+L      
Sbjct: 2   PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDG 61

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVP 202
                             EE  + VD++  +A+ + A  MG + Y+  S    D    + 
Sbjct: 62  SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIF 121

Query: 203 LMEIKYCTEQFLQDSGLPHVIIR 225
              +K   EQ LQ+ G P + I 
Sbjct: 122 YNRVKGELEQALQEQGWPQLTIA 144

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 48.7 bits (115), Expect = 2e-07
 Identities = 32/176 (18%), Positives = 50/176 (28%), Gaps = 35/176 (19%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR-----------PRPAPADFLRDWGATVVNA 134
           +LV G  G +G   VR+ L   Y                   R   A    D     V+ 
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62

Query: 135 DLSKPETIPATLVGVHTVIDCATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQKY 187
           D+     +   L GV  ++  A                + + +G   L+QCA   G+ + 
Sbjct: 63  DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRV 122

Query: 188 VFYSIHN-CDKHPEVPLMEI------------KYCTEQFLQD----SGLPHVIIRL 226
           V  S +            E             K  ++   +      GL   I R 
Sbjct: 123 VHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRC 178

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 47.7 bits (112), Expect = 6e-07
 Identities = 29/173 (16%), Positives = 54/173 (31%), Gaps = 15/173 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLV------RPRPAPADFLRDWGATVVNADLSKP 139
           +LV G +G +G     + L  G+DV  L       R      + L     T V  D+   
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62

Query: 140 ETIPA--TLVGVHTVIDCA-----TGRPEEPIK--KVDWEGKVALIQCAKAMGIQKYVFY 190
             +        + TVI  A         ++P++    +  G + LI   +A  ++ ++F 
Sbjct: 63  ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFS 122

Query: 191 SIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCL 243
           S                + T       G   +++         +        L
Sbjct: 123 SSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 47.2 bits (111), Expect = 7e-07
 Identities = 34/218 (15%), Positives = 53/218 (24%), Gaps = 36/218 (16%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           I + GA G +   I RR   EG+ V      +                 DL   E     
Sbjct: 18  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF-CDEFHLVDLRVMENCLKV 76

Query: 146 LVGVHTVIDC--------ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK 197
             GV  V +                 I   +      +I+ A+  GI+++ + S      
Sbjct: 77  TEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYP 136

Query: 198 HPEVPLMEI--------------------KYCTEQFLQD----SGLPHVIIRLWPYWAIC 233
             +                          K  TE+  +      G+   I R    +   
Sbjct: 137 EFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPF 196

Query: 234 STYTRREVCLGNGCTNSNCIHGHSGYSATD---IRSFT 268
            T+                          D    RSFT
Sbjct: 197 GTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFT 234

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 45.6 bits (106), Expect = 3e-06
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 7/64 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA-------TVVNADLSK 138
           +LV GA G +   +V + L+ GY VR   R     A+  + W A       T V  D+ K
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK 73

Query: 139 PETI 142
               
Sbjct: 74  QGAY 77

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 44.4 bits (105), Expect = 4e-06
 Identities = 19/92 (20%), Positives = 26/92 (28%), Gaps = 8/92 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE----- 140
           +LV G    +GR I +    EG  V  L   RP   +     G      DL         
Sbjct: 8   VLVTGGARGIGRAIAQAFAREGALV-ALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRF 66

Query: 141 --TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
                  L  V  +++ A          V   
Sbjct: 67  VEEAAYALGRVDVLVNNAAIAAPGSALTVRLP 98

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 44.4 bits (103), Expect = 4e-06
 Identities = 17/157 (10%), Positives = 45/157 (28%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           +LV GA+G  G+ + ++  +           R A         A V   D++  ++I   
Sbjct: 6   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPA 65

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLME 205
             G+  ++   +  P+        +G             ++  +    N     +V  ++
Sbjct: 66  FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK 125

Query: 206 IKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVC 242
                      +    +         +      + + 
Sbjct: 126 HIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLA 162

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 44.2 bits (104), Expect = 6e-06
 Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 7/92 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE----- 140
           +L+ GA   +GR  +     EG  +           +     GA  V  D++ P      
Sbjct: 8   VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERG 67

Query: 141 --TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
                A L  +  V+  A    +    K+  E
Sbjct: 68  FAEALAHLGRLDGVVHYAGITRDNFHWKMPLE 99

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 44.1 bits (103), Expect = 7e-06
 Identities = 20/163 (12%), Positives = 37/163 (22%), Gaps = 27/163 (16%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           + + G  G +G  I R+    G     L          L D  A  V+   +        
Sbjct: 5   VFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELN---LLDSRA--VHDFFASERIDQVY 59

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS-------------- 191
           L         A           +   +  +I  A    + K +F                
Sbjct: 60  LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMA 119

Query: 192 ----IHNCDKHPEVPLMEIKYCTEQFLQD----SGLPHVIIRL 226
               +    +    P    K    +  +      G  +  +  
Sbjct: 120 ESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMP 162

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.8 bits (103), Expect = 8e-06
 Identities = 26/125 (20%), Positives = 39/125 (31%), Gaps = 15/125 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPA 144
            LV GA   +GR  V+     G  V  + R         ++  G   V  DL   +    
Sbjct: 8   ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEK 67

Query: 145 TL---VGVHTVIDCATGRPEEPIKKVDWE-----------GKVALIQCAKAMGIQKYVFY 190
            L     V  +++ A     +P  +V  E               + Q      I + V  
Sbjct: 68  ALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG 127

Query: 191 SIHNC 195
           SI N 
Sbjct: 128 SIVNV 132

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (100), Expect = 1e-05
 Identities = 28/161 (17%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 85  SILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPETI 142
           S+ ++GA+G  GR +++  L++G    V  + R R    D            D  K +  
Sbjct: 16  SVFILGASGETGRVLLKEILEQGLFSKVTLIGR-RKLTFDEEAYKNVNQEVVDFEKLDDY 74

Query: 143 PATLVGVHTVIDCATGRPEEPIKKVDWEGK----VALIQCAKAMGIQKYVFYSIHNCDKH 198
            +   G      C      +   +          +   + AKA G + +   S    DK 
Sbjct: 75  ASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS 134

Query: 199 PEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRR 239
                +++K   E  +++       +   P   +C     R
Sbjct: 135 SNFLYLQVKGEVEAKVEELKFDRYSVF-RPGVLLCDRQESR 174

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 19/189 (10%), Positives = 40/189 (21%), Gaps = 16/189 (8%)

Query: 84  TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE--- 140
           ++ +V       G     R  + G+ V C         D L  +  T         +   
Sbjct: 1   STAIVTNVKHFGGMGSALRLSEAGHTVACHDE-SFKQKDELEAFAETYPQLKPMSEQEPA 59

Query: 141 ----TIPATLVGVHTVIDCA-TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC 195
                + +    V  ++         +PI K   E     ++        +         
Sbjct: 60  ELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVE----ALQIRPFALVNAVA 115

Query: 196 DKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIHG 255
            +  +     I + T                    A        +            I  
Sbjct: 116 SQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIP-VFAI-- 172

Query: 256 HSGYSATDI 264
              Y  ++ 
Sbjct: 173 GPNYLHSED 181

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 43.4 bits (101), Expect = 1e-05
 Identities = 24/182 (13%), Positives = 53/182 (29%), Gaps = 36/182 (19%)

Query: 80  PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR------------------PRPAPA 121
           P +P   L+ G  G +G  ++   L     V  L                     + +  
Sbjct: 13  PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 72

Query: 122 DFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKA 181
            F++     + + + +               +  +   P       + +G + ++  A+ 
Sbjct: 73  KFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSN-ATNIDGFLNMLIAARD 131

Query: 182 MGIQKYVFY-SIHNCDKHPEVPLME------------IKYCTEQFLQD----SGLPHVII 224
             +Q + +  S      HP +P +E             KY  E +        G   + +
Sbjct: 132 AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGL 191

Query: 225 RL 226
           R 
Sbjct: 192 RY 193

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 41.8 bits (98), Expect = 3e-05
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 10/95 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCL-VRPRPAPADFLRDWG--ATVVNADLSKPE-- 140
            ++ G    +GR I  R   EG D+    + P P     +R+ G     V  D+S+P   
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDV 67

Query: 141 -----TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
                 + +T      +++ A   P  P  ++ +E
Sbjct: 68  EAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFE 102

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 41.2 bits (96), Expect = 5e-05
 Identities = 28/179 (15%), Positives = 46/179 (25%), Gaps = 20/179 (11%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPETIP 143
           +L+ G    LGR +V R + EG  V  L +     A+   D G     +  D+   E   
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLE--- 64

Query: 144 ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPL 203
                                 K+D     A I       +           D+   + +
Sbjct: 65  ----DQKQAASRC----VARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINV 116

Query: 204 MEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIHGHSGYSAT 262
               +  +       LP ++          S         G G   +   H   G    
Sbjct: 117 KGYIHAVKAC-----LPALVASRGNVIFTISNAGFY--PNGGGPLYTAAKHAIVGLVRE 168

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 41.3 bits (96), Expect = 6e-05
 Identities = 30/180 (16%), Positives = 52/180 (28%), Gaps = 39/180 (21%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA----------PADFLRDWGATVVNAD 135
            L+ G TG  G  +    L++GY+V  + R   +                +    +   D
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 63

Query: 136 LSKPETIPATL-------VGVHTVIDCATGRPEEPIK--KVDWEGKVALIQCAKAMGIQK 186
           LS    +   L       V     +       E P     VD  G + L++  + +G++K
Sbjct: 64  LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEK 123

Query: 187 ---YVFYSIHNC-DKHPEVPLMEI------------KYCTEQFLQD----SGLPHVIIRL 226
              +   S         E+P  E             K        +     G+      L
Sbjct: 124 KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGIL 183

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 40.8 bits (95), Expect = 6e-05
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 5/86 (5%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP-ETIPA 144
           +LV+ A+  +GR +      EG +V    R      + L+  G   V  DL K  + +  
Sbjct: 7   VLVLAASRGIGRAVADVLSQEGAEVTICAR----NEELLKRSGHRYVVCDLRKDLDLLFE 62

Query: 145 TLVGVHTVIDCATGRPEEPIKKVDWE 170
            +  V  ++  A G       ++  E
Sbjct: 63  KVKEVDILVLNAGGPKAGFFDELTNE 88

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 6e-05
 Identities = 26/128 (20%), Positives = 44/128 (34%), Gaps = 15/128 (11%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIP- 143
           +LV GA   +GR  V+     G  V  + R +      +R+  G   V  DL   E    
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATER 69

Query: 144 --ATLVGVHTVIDCATGRPEEPIKKVDWE-----------GKVALIQCAKAMGIQKYVFY 190
              ++  V  +++ A     +P  +V  E             + + Q      I + V  
Sbjct: 70  ALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPG 129

Query: 191 SIHNCDKH 198
           +I N    
Sbjct: 130 AIVNVSSQ 137

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 40.7 bits (95), Expect = 7e-05
 Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 9/94 (9%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPE--- 140
            LV G    +G ++V+  L EG  V        A      + G  +  V  D+S      
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWT 68

Query: 141 ----TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
                +   L  ++ +++ A       ++    E
Sbjct: 69  LVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLE 102

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 40.9 bits (94), Expect = 8e-05
 Identities = 20/184 (10%), Positives = 48/184 (26%), Gaps = 15/184 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-----GATVVNADLSKPE 140
           +L+ G  G LG  +   AL +G D+          A     W         V+ D+    
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKN 62

Query: 141 TIPATLVGVH--TVIDCATGRP-----EEPIK--KVDWEGKVALIQCA-KAMGIQKYVFY 190
            +   +      +    A         + P    +++  G + L++   +       ++ 
Sbjct: 63  DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYS 122

Query: 191 SIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNS 250
           S +      E             +          +L  +     +    +  + +     
Sbjct: 123 STNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF 182

Query: 251 NCIH 254
               
Sbjct: 183 GLNT 186

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 41.1 bits (95), Expect = 8e-05
 Identities = 22/158 (13%), Positives = 46/158 (29%), Gaps = 11/158 (6%)

Query: 85  SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA------DFLRDWGATVVNADLSK 138
           +I+V G  G +G   V    +   DV   V  +   A      + +      +V  D++ 
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD 63

Query: 139 PETIPATLVGVHTVIDCA----TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN 194
            E +         ++  A                    +      +A       F+ +  
Sbjct: 64  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 123

Query: 195 CDKHPEVPLME-IKYCTEQFLQDSGLPHVIIRLWPYWA 231
            + + ++PL E +    E   +            PY +
Sbjct: 124 DEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSS 161

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 40.7 bits (93), Expect = 1e-04
 Identities = 23/170 (13%), Positives = 39/170 (22%), Gaps = 3/170 (1%)

Query: 86  ILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA 144
           +L++G  G +G  +  R L E  Y+V  L     A + FL       V  D+S       
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIE 62

Query: 145 TLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLM 204
               V                +             +                  P    +
Sbjct: 63  YH--VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEV 120

Query: 205 EIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIH 254
                 + F +D     V     P W    +    +  +           
Sbjct: 121 YGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQF 170

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 40.1 bits (93), Expect = 1e-04
 Identities = 18/98 (18%), Positives = 30/98 (30%), Gaps = 13/98 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG------ATVVNADLSKP 139
           I+V G    +G    R     G +V  + R      +     G            D+S  
Sbjct: 12  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT 71

Query: 140 E-------TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
           +        I A L  +  +I  A     +P  ++  E
Sbjct: 72  DIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHE 109

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 13/98 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG------ATVVNADLSKP 139
            LV G +  LG  I +   + G  V    R     ++  +               D+S  
Sbjct: 8   ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY 67

Query: 140 E-------TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
           E        +      + TV++ A      P ++   +
Sbjct: 68  EEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLD 105

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 16/110 (14%), Positives = 39/110 (35%), Gaps = 20/110 (18%)

Query: 75  MSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR-PAPADFLRDW---GAT 130
           MSPG+      ++V GA   +G  +V++ + +      +   R    A  L+        
Sbjct: 1   MSPGS------VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVH 54

Query: 131 VVNADLSKPETIPATL---------VGVHTVIDCA-TGRPEEPIKKVDWE 170
           V+   ++  +++   +          G+  +I+ A          + +  
Sbjct: 55  VLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRA 104

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.0 bits (92), Expect = 2e-04
 Identities = 24/139 (17%), Positives = 41/139 (29%), Gaps = 15/139 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR------PRPAPADFLRDWGATVVNADLSKP 139
           +LV G  G +G   V   ++ GYD               A  + L          DL   
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 63

Query: 140 ETI--PATLVGVHTVIDCA-------TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFY 190
           + +        + +VI  A       + +        +  G V L++  +   + K+VF 
Sbjct: 64  KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFS 123

Query: 191 SIHNCDKHPEVPLMEIKYC 209
           S              I   
Sbjct: 124 SSATVYGDATRFPNMIPIP 142

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (92), Expect = 2e-04
 Identities = 13/97 (13%), Positives = 31/97 (31%), Gaps = 12/97 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-GATVVNADLSKPETIPA 144
           ++V G    +G  IVR  ++ G  V    +         ++  GA  +  D+++ + +  
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKT 68

Query: 145 TL-----------VGVHTVIDCATGRPEEPIKKVDWE 170
            +             V+        +  E      + 
Sbjct: 69  LVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFR 105

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 9/94 (9%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPETIP 143
           ILV GA   +GR  +     EG  +  + R     A+ +      A  V AD+S P+ + 
Sbjct: 8   ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVE 67

Query: 144 A-------TLVGVHTVIDCATGRPEEPIKKVDWE 170
           A           +H V   A          +  E
Sbjct: 68  AVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLE 101

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.8 bits (91), Expect = 2e-04
 Identities = 19/188 (10%), Positives = 36/188 (19%), Gaps = 16/188 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW----GATVVNADLSKPET 141
           + V G TG  G  +       G  V+      P             G      D+     
Sbjct: 11  VFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNK 70

Query: 142 IP----------ATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
           +              +    ++  +   P E            L       G++  V  +
Sbjct: 71  LLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT 130

Query: 192 IHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSN 251
              C  + E      +                       +            G   T   
Sbjct: 131 SDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCA--ELVTSSYRNSFFNPANYGQHGTAVA 188

Query: 252 CIHGHSGY 259
            +   +  
Sbjct: 189 TVRAGNVI 196

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPETI 142
           +++ G    LG +  R+A+  G  V          A   R+ G  A   + D++  E  
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDW 66

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 28/194 (14%), Positives = 50/194 (25%), Gaps = 24/194 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA-----TVVNADLSKPE 140
            LV G +  +G  IV      G  V    R +    D L  W +          DLS   
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRS 70

Query: 141 TIPATL--------VGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYS 191
                +          ++ +++ A     +  K    E        +  M I  +  ++ 
Sbjct: 71  ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVE------DYSLIMSINFEAAYHL 124

Query: 192 IHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRRE-VCLGNGCTNS 250
                   +                  +P+  +      A+    TR             
Sbjct: 125 SVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAM-DQLTRCLAFEWAKDNIRV 183

Query: 251 NCIHGHSGYSATDI 264
           N +    G  AT +
Sbjct: 184 NGV--GPGVIATSL 195

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 11/104 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG----ATVVNADLSKPE- 140
            ++ G T  +G  I  + ++EG  V    R         +  G          D S  + 
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDG 68

Query: 141 ------TIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQC 178
                         V T+++ A     + +++        L+  
Sbjct: 69  WTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAV 112

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 14/82 (17%)

Query: 74  NMSPGTPVRPTS-------ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD 126
           +  PG P+ P S        LV GA   +GR++       G  V          A+ +  
Sbjct: 3   DAIPG-PLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVA 61

Query: 127 W------GATVVNADLSKPETI 142
                   A  V A++   E I
Sbjct: 62  AIKKNGSDAACVKANVGVVEDI 83

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 39.3 bits (91), Expect = 3e-04
 Identities = 21/151 (13%), Positives = 43/151 (28%), Gaps = 10/151 (6%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPE--- 140
            LV G    +G   VR  + EG  V               +    A  V+ D+++P    
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWK 68

Query: 141 ----TIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD 196
               T      G+H +++ A       I+      +   I      G+   +   +    
Sbjct: 69  AAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALT-EWQRILDVNLTGVFLGIRAVVKPMK 127

Query: 197 KHPEVPLMEIKYCTEQFLQDSGLPHVIIRLW 227
           +     ++ I          +   +   +  
Sbjct: 128 EAGRGSIINISSIEGLAGTVACHGYTATKFA 158

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 39.0 bits (90), Expect = 4e-04
 Identities = 26/192 (13%), Positives = 51/192 (26%), Gaps = 51/192 (26%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP------ADFLRDWGATVVNADLSKP 139
           IL+ G  G +G  +VR  +    D    +            +D          +AD+   
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDS 62

Query: 140 ETIPATL--VGVHTVIDCA--TGRP---EEPIK--KVDWEGKVALIQCAKAMGIQ----- 185
             I           V+  A  +        P    + +  G  AL++ A+          
Sbjct: 63  AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDK 122

Query: 186 ----KYVFYS----------IHNCDKHPEVPLMEI-------------KYCTEQFLQD-- 216
               ++   S              +    +PL                K  ++  ++   
Sbjct: 123 KNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWR 182

Query: 217 --SGLPHVIIRL 226
              GLP ++   
Sbjct: 183 RTYGLPTIVTNC 194

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (89), Expect = 5e-04
 Identities = 22/106 (20%), Positives = 33/106 (31%), Gaps = 14/106 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP---APADFLRDWG----ATVVNADLSK 138
            LV GA+G +G  + R  + +G  V    R        A   +  G          DLS 
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 72

Query: 139 PE-------TIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQ 177
            E        I +   GV   I+ A     + +      G   +  
Sbjct: 73  EEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFN 118

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.7 bits (86), Expect = 9e-04
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 5/63 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-----ADFLRDWGATVVNADLSKPE 140
            LV G TG  G  + +  L++GY V  LV  R +       +   +      + D++   
Sbjct: 3   ALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADAC 62

Query: 141 TIP 143
           ++ 
Sbjct: 63  SVQ 65

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 17/98 (17%), Positives = 28/98 (28%), Gaps = 13/98 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA-----TVVNADLSKPE 140
            LV G +  +G  IV      G  V    R      + L  W            DL    
Sbjct: 9   ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRT 68

Query: 141 -------TIPATLVG-VHTVIDCATGRPEEPIKKVDWE 170
                  T+     G ++ +++ A     +  K    +
Sbjct: 69  ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEK 106

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 37.5 bits (86), Expect = 0.001
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPETIP 143
            L+ G+   +GR      + EG  V        A      + G  A  +  D++   +I 
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASID 67

Query: 144 A 144
            
Sbjct: 68  R 68

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 12/100 (12%), Positives = 30/100 (30%), Gaps = 15/100 (15%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP---APADFLRDWG-----ATVVNADLS 137
           +++ G++  +GR        EG +V    R           +   G        V AD++
Sbjct: 8   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 67

Query: 138 KPE-------TIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
             +       +       +  +++ A     +       +
Sbjct: 68  TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTD 107

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 19/98 (19%), Positives = 29/98 (29%), Gaps = 13/98 (13%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG-----ATVVNADLSKPE 140
           +LV G T  +G  IV      G  +    R      + L  W       T    D S   
Sbjct: 11  VLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRP 70

Query: 141 -------TIPATLVG-VHTVIDCATGRPEEPIKKVDWE 170
                  T+ +   G +  +I+       +P      E
Sbjct: 71  EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAE 108

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 20/106 (18%), Positives = 31/106 (29%), Gaps = 13/106 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRDWG--ATVVNADLSKP 139
            L  GA   +GR I       G  V          A+     L+  G     + AD+SKP
Sbjct: 9   ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP 68

Query: 140 E-------TIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQC 178
                      +   G+  V+  +         +V  E    +   
Sbjct: 69  SEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNL 114

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 17/119 (14%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD------FLRDWGATVVNADLSKP 139
           ++ V A G +G    R  +        ++     P               T    D++ P
Sbjct: 8   VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVP 67

Query: 140 --------ETIPATLVGVHTVIDCATGRPEEPIKK---VDWEGKVALIQCAKAMGIQKY 187
                   + I   L  V  +I+ A    +  I++   +++ G V           ++ 
Sbjct: 68  VAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRK 126

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 5/64 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP---ADFLRDWG--ATVVNADLSKPE 140
            ++ GA   +G++I       G  V        A     D ++  G  A     D++  +
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ 73

Query: 141 TIPA 144
            + A
Sbjct: 74  ELSA 77

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 19/130 (14%), Positives = 34/130 (26%), Gaps = 5/130 (3%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           +LV GA G LGR       + G  V                  A  V  ++ +       
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLME 205
                   +       +   ++D      ++  A  +  + +   S  + D    V L  
Sbjct: 70  NYDSVEAGEKLVKTALDTFGRID-----VVVNNAGILRDRSFSRISDEDWDIIQRVHLRG 124

Query: 206 IKYCTEQFLQ 215
               T     
Sbjct: 125 SFQVTRAAWD 134

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.3 bits (83), Expect = 0.002
 Identities = 15/93 (16%), Positives = 26/93 (27%), Gaps = 8/93 (8%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGAT--------VVNADLS 137
           +LV G  G LG + V+      + V  +       A        T         V A++ 
Sbjct: 5   VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVG 64

Query: 138 KPETIPATLVGVHTVIDCATGRPEEPIKKVDWE 170
           K          +      A G  +      + +
Sbjct: 65  KLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCD 97

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 7/66 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-------GATVVNADLSK 138
            +V G+T  +G  I      +G D+        A  + +R               ADLSK
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK 66

Query: 139 PETIPA 144
            E +  
Sbjct: 67  GEAVRG 72

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 36.8 bits (83), Expect = 0.002
 Identities = 22/171 (12%), Positives = 47/171 (27%), Gaps = 4/171 (2%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
           IL+ G TG +G ++ R     G  +   V  +    D   +           +P+ I   
Sbjct: 3   ILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGD-FSNPKGVAETVRKLRPDVI--- 58

Query: 146 LVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLME 205
           +               E  + ++     A+ + A   G     + + +      ++P  E
Sbjct: 59  VNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQE 118

Query: 206 IKYCTEQFLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIHGH 256
               +   +           L         +    V  G G   +  +   
Sbjct: 119 TDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRL 169

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 0.002
 Identities = 11/88 (12%), Positives = 27/88 (30%), Gaps = 3/88 (3%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA- 144
           I++  A   +G+        EG  V           +  +  G      D++K + I   
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQF 68

Query: 145 --TLVGVHTVIDCATGRPEEPIKKVDWE 170
              +  +  + + A       +   + +
Sbjct: 69  ANEVERLDVLFNVAGFVHHGTVLDCEEK 96

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 0.002
 Identities = 12/127 (9%), Positives = 26/127 (20%), Gaps = 13/127 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG------ATVVNADLSKP 139
             + G    LG+ +       G       R                      +  D+  P
Sbjct: 28  AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP 87

Query: 140 ETI-------PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI 192
           + +              + VI+ A G    P +++       +            +    
Sbjct: 88  DMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGK 147

Query: 193 HNCDKHP 199
                  
Sbjct: 148 QLIKAQK 154

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.2 bits (82), Expect = 0.003
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR 115
            L+ G TG  G  +    L +GY+V  L+R
Sbjct: 4   ALITGITGQDGSYLTEFLLGKGYEVHGLIR 33

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP---ADFLRDWG--ATVVNADLSKPE 140
            LV GA   +GR+I +        V C+ R + +     D ++ +G  ++    D+SK E
Sbjct: 13  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKE 72

Query: 141 TIPA 144
            I  
Sbjct: 73  EISE 76

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} Length = 128

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 34.9 bits (80), Expect = 0.003
 Identities = 19/112 (16%), Positives = 47/112 (41%), Gaps = 19/112 (16%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT 145
             +VG +G +G++I +   ++G+++   V       + + +  +  V  D S PE +P T
Sbjct: 3   YGIVGYSGRMGQEIQKVFSEKGHELVLKV-----DVNGVEELDSPDVVIDFSSPEALPKT 57

Query: 146 L-----VGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI 192
           +          V+   T   EE ++ +         + +K + + +    ++
Sbjct: 58  VDLCKKYRAGLVL-GTTALKEEHLQMLR--------ELSKEVPVVQAYSRTV 100

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 36.0 bits (81), Expect = 0.003
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVR 115
           IL+ GA G LGR+I ++   +  +V     
Sbjct: 4   ILITGANGQLGREIQKQLKGKNVEVIPTDV 33

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 4/61 (6%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGA----TVVNADLSKPET 141
            ++ G  G +G    +  +  G  V               + G+    + V+ D++K E 
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDED 68

Query: 142 I 142
           +
Sbjct: 69  V 69

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 35.9 bits (82), Expect = 0.003
 Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 6/65 (9%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW------GATVVNADLSKP 139
           +++ G++  LG+ +  R   E   V    R +   A+ + +        A  V  D++  
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69

Query: 140 ETIPA 144
             +  
Sbjct: 70  SDVIN 74

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (82), Expect = 0.004
 Identities = 31/181 (17%), Positives = 51/181 (28%), Gaps = 40/181 (22%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW-----------GATVVNA 134
            L+ G TG  G  +    L++GY+V  +VR   +      +               +   
Sbjct: 4   ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63

Query: 135 DLSKPETIPATLVGVHTVIDCATG---------RPEEPIKKVDWEGKVALIQCAKAMGIQ 185
           DL+    +   +  V        G            E    VD  G + L+   K  G+ 
Sbjct: 64  DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 123

Query: 186 KYVFY----SIHNCDKHPEVPLMEI------------KYCTEQFLQD----SGLPHVIIR 225
             V +    +     K  E+P  E             K      + +      L  V   
Sbjct: 124 NSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGI 183

Query: 226 L 226
           L
Sbjct: 184 L 184

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 35.5 bits (81), Expect = 0.004
 Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 6/65 (9%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD------WGATVVNADLSKP 139
           ++V GA+  +G+ I       G  V          A+ +          A     D+SK 
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 140 ETIPA 144
             + A
Sbjct: 64  ADVEA 68

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 35.6 bits (81), Expect = 0.004
 Identities = 20/154 (12%), Positives = 42/154 (27%), Gaps = 8/154 (5%)

Query: 87  LVVGATGTLGRQIVRRALDEGYDVRCLVRPRP---APADFLRDWG--ATVVNADLSKPET 141
           LV GA   +G+ I  R + +G+ V           A A  +   G  A  V  D+S  + 
Sbjct: 5   LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQ 64

Query: 142 I---PATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKH 198
           +              D                    ++     + ++  ++      +  
Sbjct: 65  VFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAF 124

Query: 199 PEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAI 232
            +                 G P + +     +A+
Sbjct: 125 KKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV 158

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 35.5 bits (81), Expect = 0.004
 Identities = 19/124 (15%), Positives = 37/124 (29%), Gaps = 16/124 (12%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE----- 140
           +LV G    +G  I +R   +G+ V    R   AP       G   V  D++  +     
Sbjct: 10  VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------GLFGVEVDVTDSDAVDRA 63

Query: 141 --TIPATLVGVHTVIDCATGRPEEPIKKVD---WEGKVALIQCAKAMGIQKYVFYSIHNC 195
              +      V  ++  A    +  + ++    +E  +           Q+       N 
Sbjct: 64  FTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK 123

Query: 196 DKHP 199
               
Sbjct: 124 FGRM 127

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 35.5 bits (81), Expect = 0.004
 Identities = 14/128 (10%), Positives = 32/128 (25%), Gaps = 14/128 (10%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP---APADFLRDWG----ATVVNADLSK 138
           +L+ G    LGR    R   EG  +  +        A    + +           AD+S 
Sbjct: 7   VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 66

Query: 139 PE-------TIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS 191
                            +    + A    ++   +     +   +      G+   +   
Sbjct: 67  EAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKV 126

Query: 192 IHNCDKHP 199
           +    +  
Sbjct: 127 LKIMREQG 134

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 35.5 bits (81), Expect = 0.004
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 5/64 (7%)

Query: 86  ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP---ADFLRDWG--ATVVNADLSKPE 140
            LV GA G +G     R  +EG  +  L   R A       +R+ G  A     D++  E
Sbjct: 8   CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEE 67

Query: 141 TIPA 144
            +  
Sbjct: 68  AVIG 71

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	269
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.97
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.94
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.94
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.92
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.92
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.92
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.91
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.91
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.9
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.9
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.9
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.9
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.9
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.9
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.89
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.89
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.88
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.88
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.87
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.87
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.87
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.87
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.87
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.87
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.87
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.87
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.86
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.86
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.86
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.86
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.86
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.86
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.86
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.86
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.86
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.86
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.85
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.85
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.85
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.85
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.85
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.84
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.84
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.84
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.84
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.84
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.84
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.83
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.83
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.83
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.83
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.83
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.83
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.82
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.82
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.82
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.82
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.82
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.82
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.81
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.81
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.81
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.81
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.81
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.81
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.81
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.8
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.8
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.8
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.79
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.79
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.79
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.78
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.78
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.78
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.77
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.76
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.76
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.76
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.75
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.74
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.74
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.74
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.74
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.74
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.71
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.67
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.64
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.63
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.59
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.59
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.56
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.51
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.5
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.5
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.43
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.39
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.88
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.63
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.35
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.29
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.22
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	98.21
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.13
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.06
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.04
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.02
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.02
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.01
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.01
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.94
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.93
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.92
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.92
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.91
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.88
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.85
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.82
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.79
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.78
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.75
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.75
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.74
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.73
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.73
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.7
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.67
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.66
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.65
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.65
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.65
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.65
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.63
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.63
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.63
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.61
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.57
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.56
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.56
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.55
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	97.55
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.53
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.52
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.52
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.5
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.48
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.45
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.44
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.43
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.42
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.41
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.4
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.39
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.35
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.31
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	97.31
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	97.3
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.28
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.27
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	97.24
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.23
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.2
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.2
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.2
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.2
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.2
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.19
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.17
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.16
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.15
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.15
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.15
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.14
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	97.11
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.1
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.07
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	97.03
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.01
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	97.01
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.99
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.99
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.97
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.96
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.88
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.86
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.71
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.66
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.65
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.65
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.58
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.58
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.52
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.51
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.46
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.45
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.45
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.35
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.31
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.31
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.29
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.27
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.23
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.22
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.21
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.2
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.2
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	96.19
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.16
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.13
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.12
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.09
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	96.06
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	96.05
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.04
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	96.03
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.99
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.97
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.92
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.88
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.87
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.87
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.86
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.8
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	95.8
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.75
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.74
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.7
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.65
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.62
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	95.55
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.55
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.47
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.46
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.38
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.32
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.22
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	95.17
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	95.12
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.09
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.08
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.02
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.98
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.93
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.72
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.57
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	94.57
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	94.48
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	94.42
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	94.4
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	94.28
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	94.27
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	94.01
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	93.74
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.73
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	93.31
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	93.3
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	93.29
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	93.27
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	93.21
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	93.14
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.1
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	93.04
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	93.03
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.99
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	92.98
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	92.94
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	92.86
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	92.85
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.79
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	92.78
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	92.65
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	92.57
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.52
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	92.5
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	92.33
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.18
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	92.03
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	92.01
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.96
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	91.83
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.8
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.68
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	91.63
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	91.55
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	91.5
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	91.44
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	91.37
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	91.02
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.61
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.4
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	90.33
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	90.27
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	89.32
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	89.07
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.79
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	88.75
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	88.67
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	88.3
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	88.01
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	88.01
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	87.67
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	87.62
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	87.58
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	86.54
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	85.87
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	85.82
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	85.29
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	85.09
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	85.04
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	84.96
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	84.79
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	84.77
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	84.77
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	84.37
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	84.3
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	84.28
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	84.24
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.21
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	84.18
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	84.18
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	84.16
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	84.08
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	83.68
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.64
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	83.44
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	82.42
d1iowa1	96	D-Ala-D-Ala ligase, N-domain {Escherichia coli, ge	82.27
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	82.27
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	82.13
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	81.72
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.71
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.64
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	81.58
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	81.09
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.98
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	80.95
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	80.9
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	80.78
d1x74a1	359	2-methylacyl-CoA racemase Mcr {Mycobacterium tuber	80.59
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	80.24
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	80.07

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.5e-30  Score=209.57  Aligned_cols=179  Identities=22%  Similarity=0.192  Sum_probs=144.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      |.||||+||||||+||++++++|+++||+|++++|++++... ....+++++.+|++|.+++.++++++|+|||++|...
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~   79 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-EGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN   79 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-SSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-ccccccccccccccchhhHHHHhcCCCEEEEEeccCC
Confidence            678999999999999999999999999999999998766544 3345799999999999999999999999999999766


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCC------CcHHHHHHHHHHHHHhcCCCEEEEEcCcccccCc
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPE------VPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~------~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g~~~  234 (269)
                      .....+++..++.++++++++++++|||++||.+....+.      .+|...|...|+++++.+++|++|||+.+++...
T Consensus        80 ~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~tiirp~~~~~~~~  159 (205)
T d1hdoa_          80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPL  159 (205)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSEEECCCC
T ss_pred             chhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHHHHhcCCceEEEecceecCCCC
Confidence            6666678899999999999999999999999876533222      2478899999999999999999999999987533


Q ss_pred             ccccceeEeCCCccccccccCCCCcchhccchhc
Q 024290          235 TYTRREVCLGNGCTNSNCIHGHSGYSATDIRSFT  268 (269)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvrd~~  268 (269)
                      ..        ..........+..+++..|+.+++
T Consensus       160 ~~--------~~~~~~~~~~~~~~i~~~DvA~~~  185 (205)
T d1hdoa_         160 TG--------AYTVTLDGRGPSRVISKHDLGHFM  185 (205)
T ss_dssp             CS--------CCEEESSSCSSCSEEEHHHHHHHH
T ss_pred             cc--------cEEEeeCCCCCCCcCCHHHHHHHH
Confidence            21        111111222344557777777653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.1e-27  Score=195.67  Aligned_cols=155  Identities=17%  Similarity=0.217  Sum_probs=135.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      |++|+|||||||||||++|+++|+++|+  +|++++|++...... ....++...+|+.+.+++.++++++|++||++|.
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~   90 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT   90 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-GGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-ccceeeeeeecccccccccccccccccccccccc
Confidence            6778999999999999999999999994  899999986554332 2336788889999999999999999999999985


Q ss_pred             CC----CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCC-EEEEEcCcccccC
Q 024290          159 RP----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLP-HVIIRLWPYWAIC  233 (269)
Q Consensus       159 ~~----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~-~~ilrp~~i~g~~  233 (269)
                      ..    ...+.++|+.++.+++++|++.++++||++|+..+...+..+|+.+|..+|+++++.+++ ++|+||+.+||+.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~~Y~~~K~~~E~~l~~~~~~~~~IlRP~~i~G~~  170 (232)
T d2bkaa1          91 TRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDR  170 (232)
T ss_dssp             CHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHHTTCCSEEEEEECCEEECTT
T ss_pred             cccccchhhhhhhcccccceeeecccccCccccccCCccccccCccchhHHHHHHhhhccccccccceEEecCceeecCC
Confidence            32    345677899999999999999999999999999998888999999999999999999986 8999999999986


Q ss_pred             ccc
Q 024290          234 STY  236 (269)
Q Consensus       234 ~~~  236 (269)
                      ...
T Consensus       171 ~~~  173 (232)
T d2bkaa1         171 QES  173 (232)
T ss_dssp             GGG
T ss_pred             CcC
Confidence            543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=3.9e-27  Score=208.81  Aligned_cols=151  Identities=18%  Similarity=0.188  Sum_probs=120.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-----Ccc-----ccccCCCEEEEcCCCCCCcHHHHhcC--ccE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-----PAD-----FLRDWGATVVNADLSKPETIPATLVG--VHT  151 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-----~~~-----~~~~~~~~~i~~Dl~d~~~l~~~~~~--~d~  151 (269)
                      |+|||||||||||++|+++|+++|++|++++|....     ...     .....+++++++|++|.+++.+++++  +|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            789999999999999999999999999999995431     111     11223688999999999999999975  599


Q ss_pred             EEEcCCCC-------CCccchhhcHHHHHHHHHHHHHcCCC---eEEEecccCC-------------CCCCCCcHHHHHH
Q 024290          152 VIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQ---KYVFYSIHNC-------------DKHPEVPLMEIKY  208 (269)
Q Consensus       152 vi~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v~---r~V~~SS~~~-------------~~~~~~~y~~sK~  208 (269)
                      |||+|+..       ++..++++|+.++.+|+++|++.+++   +|||+||..+             ...|.++|+.+|.
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~  161 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL  161 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHH
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHH
Confidence            99999842       22346789999999999999998654   7999998642             1245678999999


Q ss_pred             HHHHHHHh----cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD----SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~----~gi~~~ilrp~~i~g~~~  234 (269)
                      ++|++++.    .+++++++||+++||+..
T Consensus       162 ~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~  191 (357)
T d1db3a_         162 YAYWITVNYRESYGMYACNGILFNHESPRR  191 (357)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTS
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeccccCCCC
Confidence            99988753    699999999999999853

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1.4e-25  Score=197.08  Aligned_cols=152  Identities=22%  Similarity=0.295  Sum_probs=126.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc------ccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD------FLRDWGATVVNADLSKPETIPATLV--GVHTVIDC  155 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~------~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~  155 (269)
                      ||||||||+||||++|++.|+++|++|++++|-......      .....+++++++|++|.+.+.++++  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            579999999999999999999999999999874332211      1234479999999999999999987  79999999


Q ss_pred             CCCC-------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC--------------CCCCCCcHHHHHHHHHHHH
Q 024290          156 ATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--------------DKHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       156 ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~--------------~~~~~~~y~~sK~~~e~~~  214 (269)
                      |+..       .+...+++|+.++.+++++|++.++++||++||..+              ...|..+|+.+|...|+++
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~  160 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence            9842       234677899999999999999999999999998653              1245678999999999887


Q ss_pred             Hh-----cCCCEEEEEcCcccccCcc
Q 024290          215 QD-----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       215 ~~-----~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+     .+++++++||+++||+...
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~  186 (338)
T d1udca_         161 TDLQKAQPDWSIALLRYFNPVGAHPS  186 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTT
T ss_pred             HHHHhhccCCeEEEEeeccEEeccCC
Confidence            53     5899999999999998544

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=2.6e-25  Score=196.83  Aligned_cols=153  Identities=21%  Similarity=0.186  Sum_probs=127.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC-
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP-  160 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~-  160 (269)
                      ++||||||||+||||++|+++|+++|++|+++++....... ......++..+|+.+.+.+.++++++|.|||+|+... 
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~   92 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGG   92 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-hhcccCcEEEeechhHHHHHHHhhcCCeEeeccccccc
Confidence            56789999999999999999999999999999875443221 2223568899999999999999999999999997432 


Q ss_pred             -------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC--------------------CCCCCCcHHHHHHHHHHH
Q 024290          161 -------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--------------------DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       161 -------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~--------------------~~~~~~~y~~sK~~~e~~  213 (269)
                             .......|+.++.++++++++.++++||++||...                    +..|.++|+.+|.+.|++
T Consensus        93 ~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~  172 (363)
T d2c5aa1          93 MGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEEL  172 (363)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHH
T ss_pred             ccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHH
Confidence                   34456789999999999999999999999999653                    124567899999999988


Q ss_pred             HH----hcCCCEEEEEcCcccccCcc
Q 024290          214 LQ----DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       214 ~~----~~gi~~~ilrp~~i~g~~~~  235 (269)
                      ++    +.|++++++||+++||+...
T Consensus       173 ~~~~~~~~gl~~~ilR~~~vyG~~~~  198 (363)
T d2c5aa1         173 CKHYNKDFGIECRIGRFHNIYGPFGT  198 (363)
T ss_dssp             HHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred             HHHHHHHhCCCEEEEEeeeEeccCCc
Confidence            75    46999999999999998654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.7e-26  Score=198.17  Aligned_cols=151  Identities=15%  Similarity=0.182  Sum_probs=113.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC----
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG----  158 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~----  158 (269)
                      .||||||||+||||++|+++|+++|++|++++|......+.+.. ......+|+.+.+.+..++.++|+|||+|+.    
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~~   79 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH-WIGHENFELINHDVVEPLYIEVDQIYHLASPASPP   79 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG-GTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH-hcCCCceEEEehHHHHHHHcCCCEEEECcccCCch
Confidence            47999999999999999999999999999998743332222211 1111223444444445566789999999984    


Q ss_pred             ---CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC------------------CCCCCcHHHHHHHHHHHHH--
Q 024290          159 ---RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD------------------KHPEVPLMEIKYCTEQFLQ--  215 (269)
Q Consensus       159 ---~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~------------------~~~~~~y~~sK~~~e~~~~--  215 (269)
                         .++...+++|+.++.+|+++|++.++ ++||+||..+.                  ..|..+|+.+|.+.|.+++  
T Consensus        80 ~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~  158 (312)
T d2b69a1          80 NYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY  158 (312)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred             hHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence               23345678999999999999999987 89999986431                  1345679999999998874  


Q ss_pred             --hcCCCEEEEEcCcccccCcc
Q 024290          216 --DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       216 --~~gi~~~ilrp~~i~g~~~~  235 (269)
                        ..|++++++||+++||+...
T Consensus       159 ~~~~~~~~~~lR~~~vyGp~~~  180 (312)
T d2b69a1         159 MKQEGVEVRVARIFNTFGPRMH  180 (312)
T ss_dssp             HHHHCCCEEEEEECCEECTTCC
T ss_pred             HHHhCCcEEEEEeeeEECCCCC
Confidence              46999999999999998654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.1e-24  Score=191.14  Aligned_cols=151  Identities=19%  Similarity=0.212  Sum_probs=121.1

Q ss_pred             CEE-EEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-----ccccc------cCCCEEEEcCCCCCCcHHHHhc--Cc
Q 024290           84 TSI-LVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-----ADFLR------DWGATVVNADLSKPETIPATLV--GV  149 (269)
Q Consensus        84 ~~v-lVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-----~~~~~------~~~~~~i~~Dl~d~~~l~~~~~--~~  149 (269)
                      ||| ||||||||||++|+++|+++||+|++++|..+..     .....      ..+++++.+|++|.+.+.+++.  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            577 9999999999999999999999999999965321     11111      1357899999999999999885  56


Q ss_pred             cEEEEcCCCCC-------CccchhhcHHHHHHHHHHHHHcCCC---eEEEecccCC-------------CCCCCCcHHHH
Q 024290          150 HTVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQ---KYVFYSIHNC-------------DKHPEVPLMEI  206 (269)
Q Consensus       150 d~vi~~ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~---r~V~~SS~~~-------------~~~~~~~y~~s  206 (269)
                      ++++|+++...       ...+.++|+.++.++++++++.++.   +|||+||..+             +..|.++|+.+
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s  160 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  160 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence            89999988432       3445679999999999999998754   8999998653             12345689999


Q ss_pred             HHHHHHHHH----hcCCCEEEEEcCcccccCc
Q 024290          207 KYCTEQFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       207 K~~~e~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      |.++|+++.    +.+++++++||+++||+..
T Consensus       161 K~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~  192 (347)
T d1t2aa_         161 KLYAYWIVVNFREAYNLFAVNGILFNHESPRR  192 (347)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEecceeCCCC
Confidence            999999874    4699999999999999853

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=2.8e-24  Score=189.16  Aligned_cols=151  Identities=21%  Similarity=0.305  Sum_probs=123.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc------cccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA------DFLRDWGATVVNADLSKPETIPATLV--GVHTVIDC  155 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~------~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~  155 (269)
                      |.|||||||||||++|+++|+++|++|+++++......      ......+++++++|++|.+.+..++.  ++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            57999999999999999999999999999986432211      11234478999999999999999886  78999999


Q ss_pred             CCCCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-----------------CCCCCCcHHHHHHHHH
Q 024290          156 ATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-----------------DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       156 ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-----------------~~~~~~~y~~sK~~~e  211 (269)
                      |+...       +..+..+|+.++.+++++|++.++++||++||..+                 ...|.++|+.+|.+.|
T Consensus        82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E  161 (347)
T d1z45a2          82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE  161 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHH
Confidence            98532       24566799999999999999999999999999543                 1234567999999999


Q ss_pred             HHHHh------cCCCEEEEEcCcccccCc
Q 024290          212 QFLQD------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       212 ~~~~~------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++++      .+++++++||+++||+..
T Consensus       162 ~~~~~~~~~~~~~~~~~~lR~~~v~g~~~  190 (347)
T d1z45a2         162 NILNDLYNSDKKSWKFAILRYFNPIGAHP  190 (347)
T ss_dssp             HHHHHHHHHSTTSCEEEEEEECEEECCCT
T ss_pred             HHHHHHHHhhccCCcEEEEeecceEeecC
Confidence            88753      578999999999998754

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.90  E-value=9e-25  Score=192.30  Aligned_cols=152  Identities=16%  Similarity=0.270  Sum_probs=122.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC---C---ccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA---P---ADFLRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~---~---~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      .||+|||||||||||++|+++|+++|++|.++.++...   .   ...+...+++++.+|++|.+.+..++.+.|.|+|+
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            37899999999999999999999999876666553211   1   11223347899999999999999999999999999


Q ss_pred             CCC-------CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-------------------------CCCCCCcH
Q 024290          156 ATG-------RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------------------------DKHPEVPL  203 (269)
Q Consensus       156 ag~-------~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-------------------------~~~~~~~y  203 (269)
                      |+.       .++...+++|+.++.+++++++..+. ++|++||..+                         ...|.++|
T Consensus        81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y  159 (346)
T d1oc2a_          81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY  159 (346)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH
T ss_pred             hhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCCCCCCHH
Confidence            984       23456778999999999999999985 7788776532                         12345679


Q ss_pred             HHHHHHHHHHHH----hcCCCEEEEEcCcccccCc
Q 024290          204 MEIKYCTEQFLQ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       204 ~~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+|.++|.+++    +.+++++++||+++||+..
T Consensus       160 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~  194 (346)
T d1oc2a_         160 SSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQ  194 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTC
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCC
Confidence            999999998874    4799999999999999754

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.90  E-value=7.7e-25  Score=190.92  Aligned_cols=152  Identities=22%  Similarity=0.292  Sum_probs=122.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEE------EEeCCCC--C---CccccccCCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVR------CLVRPRP--A---PADFLRDWGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~------~~~R~~~--~---~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      |||||||||||||++|++.|+++|++|.      .+++...  .   ........+++++.+|+.+...+.....+.|.|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            5899999999999999999999997654      4433211  1   112223346899999999999888888999999


Q ss_pred             EEcCCCC-------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-------------CCCCCCcHHHHHHHHHH
Q 024290          153 IDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------------DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       153 i~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-------------~~~~~~~y~~sK~~~e~  212 (269)
                      +|+|+..       .....+++|+.++.+++++|++.++++|||+||..+             +..|.++|+.+|.+.|.
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  160 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            9999743       345667799999999999999999999999998753             23456789999999998


Q ss_pred             HHH----hcCCCEEEEEcCcccccCcc
Q 024290          213 FLQ----DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       213 ~~~----~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +++    +.+++++++||+++||+...
T Consensus       161 ~~~~~~~~~~~~~~~lR~~~vyGp~~~  187 (322)
T d1r6da_         161 VARAYHRTYGLDVRITRCCNNYGPYQH  187 (322)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEECTTCC
T ss_pred             HHHHHHHHhCCCEEEEEeeeEECcCCC
Confidence            874    47999999999999998653

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.90  E-value=4.1e-24  Score=175.52  Aligned_cols=146  Identities=25%  Similarity=0.328  Sum_probs=117.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-cCccEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-VGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-~~~d~vi~~ag~~  159 (269)
                      .|||||||||||||++|+++|+++|+  +|++++|++.....     .   +..+..|..++...+ ..+|+||||+|..
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~-----~---~~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP-----R---LDNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCT-----T---EECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcc-----c---ccccccchhhhhhccccchheeeeeeeee
Confidence            58999999999999999999999997  67777776432211     1   233444433333333 4689999999842


Q ss_pred             -----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCC-EEEEEcCcccccC
Q 024290          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLP-HVIIRLWPYWAIC  233 (269)
Q Consensus       160 -----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~-~~ilrp~~i~g~~  233 (269)
                           ..+.+.++|+.++.+++++|++.++++|+++|+.++...+...|..+|...|+++++.+.+ ++|+||+.+||+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~~~~~~~I~Rp~~v~G~~  153 (212)
T d2a35a1          74 IKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPR  153 (212)
T ss_dssp             HHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTT
T ss_pred             ccccccccccccchhhhhhhcccccccccccccccccccccccccccchhHHHHHHhhhccccccccceeeCCcceeCCc
Confidence                 3356777899999999999999999999999999988888899999999999999998885 9999999999987


Q ss_pred             ccc
Q 024290          234 STY  236 (269)
Q Consensus       234 ~~~  236 (269)
                      ..+
T Consensus       154 ~~~  156 (212)
T d2a35a1         154 EEF  156 (212)
T ss_dssp             SCE
T ss_pred             ccc
Confidence            553

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.7e-24  Score=187.78  Aligned_cols=139  Identities=12%  Similarity=0.108  Sum_probs=114.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCC-
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGR-  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~-  159 (269)
                      +|||||||||||||++|+++|+++|+.|+++++..               ++|+.|.+.+.+++.  ++|.|+|+++.. 
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~   66 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASERIDQVYLAAAKVG   66 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------hccccCHHHHHHHHhhcCCCEEEEcchhcc
Confidence            57999999999999999999999999998776532               258888888888874  589999999743 


Q ss_pred             -------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC------------------CCCCcHHHHHHHHHHHH
Q 024290          160 -------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK------------------HPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       160 -------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~------------------~~~~~y~~sK~~~e~~~  214 (269)
                             ....++++|+.++.+++++|++.++++|||+||..+..                  .+..+|+.+|.++|+++
T Consensus        67 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~  146 (315)
T d1e6ua_          67 GIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  146 (315)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHH
Confidence                   23445678999999999999999999999999976421                  01235999999999987


Q ss_pred             H----hcCCCEEEEEcCcccccCccc
Q 024290          215 Q----DSGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       215 ~----~~gi~~~ilrp~~i~g~~~~~  236 (269)
                      +    +.|++++++||+++||+...+
T Consensus       147 ~~~~~~~gl~~~ilR~~~vyGp~~~~  172 (315)
T d1e6ua_         147 ESYNRQYGRDYRSVMPTNLYGPHDNF  172 (315)
T ss_dssp             HHHHHHHCCEEEEEEECEEESTTCCC
T ss_pred             HHHHHHhCCCEEEEeeccEECCCCCC
Confidence            4    469999999999999986543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.90  E-value=3.8e-24  Score=189.74  Aligned_cols=152  Identities=17%  Similarity=0.241  Sum_probs=120.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC-C-----CccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP-A-----PADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDC  155 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~-~-----~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~  155 (269)
                      ||||||||+||||++|+++|+++|++|++..++.. .     ........+++++++|++|.+.+.++++  ++|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            58999999999999999999999998655443221 1     1222233478999999999999999886  58999999


Q ss_pred             CCCC-------CCccchhhcHHHHHHHHHHHHHcC---------CCeEEEecccCCC-----------------------
Q 024290          156 ATGR-------PEEPIKKVDWEGKVALIQCAKAMG---------IQKYVFYSIHNCD-----------------------  196 (269)
Q Consensus       156 ag~~-------~~~~~~~~n~~~~~~li~a~~~~~---------v~r~V~~SS~~~~-----------------------  196 (269)
                      |+..       ++...+++|+.++.+++++|++.+         +++||++||..+.                       
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~  160 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence            9842       345677899999999999998764         4589999986421                       


Q ss_pred             CCCCCcHHHHHHHHHHHHH----hcCCCEEEEEcCcccccCcc
Q 024290          197 KHPEVPLMEIKYCTEQFLQ----DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       197 ~~~~~~y~~sK~~~e~~~~----~~gi~~~ilrp~~i~g~~~~  235 (269)
                      ..|.++|+.+|.+.|.+++    +.+++++++||+++||+...
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~  203 (361)
T d1kewa_         161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHF  203 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCC
Confidence            2345669999999999885    47999999999999998653

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.2e-23  Score=184.53  Aligned_cols=150  Identities=18%  Similarity=0.235  Sum_probs=121.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHH-HhcCccEEEEcCCCCC-
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPA-TLVGVHTVIDCATGRP-  160 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~-~~~~~d~vi~~ag~~~-  160 (269)
                      |||||||||||||++|+++|+++| ++|+++++..+...+.....+++++++|+++.+++.+ +++++|+|||+|+... 
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~   80 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence            589999999999999999999999 5899999876655555666789999999998877655 6678999999999532 


Q ss_pred             ------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC--------------------CCCCCCcHHHHHHHHHHHH
Q 024290          161 ------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--------------------DKHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       161 ------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~--------------------~~~~~~~y~~sK~~~e~~~  214 (269)
                            +...+++|+.++.++++++.+.++ ++++.||..+                    ...|...|+.+|...|+++
T Consensus        81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~  159 (342)
T d2blla1          81 IEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  159 (342)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred             cccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcchhhhcccchhhhh
Confidence                  235577999999999999999987 5566666432                    0122346999999999887


Q ss_pred             H----hcCCCEEEEEcCcccccCc
Q 024290          215 Q----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       215 ~----~~gi~~~ilrp~~i~g~~~  234 (269)
                      +    +.|++++++||+.+||+..
T Consensus       160 ~~~~~~~~~~~~i~r~~~~~g~~~  183 (342)
T d2blla1         160 WAYGEKEGLQFTLFRPFNWMGPRL  183 (342)
T ss_dssp             HHHHHHHCCCEEEEEECSEECSSC
T ss_pred             hhhhcccCceeEEeeccccccccc
Confidence            4    4699999999999999743

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.89  E-value=1.7e-23  Score=183.63  Aligned_cols=155  Identities=15%  Similarity=0.210  Sum_probs=127.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc----------ccccCCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----------FLRDWGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~----------~~~~~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      +++|+|||||||||||++|+++|+++|++|++++|.......          ......++++.+|+.|...+.....+.+
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            457899999999999999999999999999999974332111          1112368899999999988888888999


Q ss_pred             EEEEcCCCC-------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-------------CCCCCCcHHHHHHHH
Q 024290          151 TVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------------DKHPEVPLMEIKYCT  210 (269)
Q Consensus       151 ~vi~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-------------~~~~~~~y~~sK~~~  210 (269)
                      .++|+++..       ++...+++|+.|+.+|+++|++.++++|||+||..+             ...|.++|+.+|.+.
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  173 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  173 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHH
Confidence            999998743       234567899999999999999999999999999753             234567899999999


Q ss_pred             HHHHH----hcCCCEEEEEcCcccccCcc
Q 024290          211 EQFLQ----DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       211 e~~~~----~~gi~~~ilrp~~i~g~~~~  235 (269)
                      |++++    ..+++++++||+++||+...
T Consensus       174 E~~~~~~~~~~~i~~~ilR~~~v~G~~~~  202 (341)
T d1sb8a_         174 ELYADVFSRCYGFSTIGLRYFNVFGRRQD  202 (341)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECCEECTTCC
T ss_pred             HHHHHHHHHHhCCCeEEEEeceeeccCcC
Confidence            98874    46899999999999998643

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=8.2e-23  Score=179.41  Aligned_cols=153  Identities=20%  Similarity=0.272  Sum_probs=123.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC------Ccc------ccccCCCEEEEcCCCCCCcHHHHhc--C
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA------PAD------FLRDWGATVVNADLSKPETIPATLV--G  148 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~------~~~------~~~~~~~~~i~~Dl~d~~~l~~~~~--~  148 (269)
                      .|||||||||||||++|+++|+++|++|+++++....      ..+      .....++.++++|++|.+.+.+++.  +
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence            4799999999999999999999999999999763211      111      1223478999999999999998875  4


Q ss_pred             ccEEEEcCCCCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC--------------CCCCCCcHHHHH
Q 024290          149 VHTVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--------------DKHPEVPLMEIK  207 (269)
Q Consensus       149 ~d~vi~~ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~--------------~~~~~~~y~~sK  207 (269)
                      +|+++|+|+...       +...+++|+.++.++++++++.++++|||+||...              ...+.++|+.+|
T Consensus        82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k  161 (346)
T d1ek6a_          82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK  161 (346)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred             cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHH
Confidence            678999998432       34567899999999999999999999999998642              234556899999


Q ss_pred             HHHHHHHHh-----cCCCEEEEEcCcccccCcc
Q 024290          208 YCTEQFLQD-----SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       208 ~~~e~~~~~-----~gi~~~ilrp~~i~g~~~~  235 (269)
                      ...|+.+++     .+++++++||+.+||+...
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~  194 (346)
T d1ek6a_         162 FFIEEMIRDLCQADKTWNAVLLRYFNPTGAHAS  194 (346)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTT
T ss_pred             HHHHHHHHHHHHhccCCceEEEeecceeccCCC
Confidence            999987653     5899999999999997543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=1.3e-22  Score=181.20  Aligned_cols=154  Identities=12%  Similarity=0.115  Sum_probs=119.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC----------CCCC------cc------ccccCCCEEEEcCCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP----------RPAP------AD------FLRDWGATVVNADLSKPE  140 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~----------~~~~------~~------~~~~~~~~~i~~Dl~d~~  140 (269)
                      ||||||||||||||++|+++|+++||+|++++.-          ....      .+      .....+++++++|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            5899999999999999999999999999998620          0000      00      012246899999999999


Q ss_pred             cHHHHhc--CccEEEEcCCCCC----------CccchhhcHHHHHHHHHHHHHcCCC-eEEEecccCC------------
Q 024290          141 TIPATLV--GVHTVIDCATGRP----------EEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNC------------  195 (269)
Q Consensus       141 ~l~~~~~--~~d~vi~~ag~~~----------~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~SS~~~------------  195 (269)
                      .+.++++  ++|+|||+|+...          ...++++|+.++.+++++|++.+++ ++++.||...            
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~  160 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY  160 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence            9999996  4699999998422          1235678999999999999998876 4666665432            


Q ss_pred             --------------CCCCCCcHHHHHHHHHHHH----HhcCCCEEEEEcCcccccCccc
Q 024290          196 --------------DKHPEVPLMEIKYCTEQFL----QDSGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       196 --------------~~~~~~~y~~sK~~~e~~~----~~~gi~~~ilrp~~i~g~~~~~  236 (269)
                                    +..|.++|+.+|...|.++    ++.+++++++||+++||+....
T Consensus       161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~  219 (393)
T d1i24a_         161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDE  219 (393)
T ss_dssp             EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTT
T ss_pred             ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccc
Confidence                          1245567999999999877    4579999999999999986543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=9.9e-23  Score=171.03  Aligned_cols=156  Identities=13%  Similarity=0.088  Sum_probs=127.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-------cCccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-------VGVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-------~~~d~v  152 (269)
                      .+++|+++||||+++||+++++.|+++|++|++.+|+.++..+..++.+++.+.+|++|++++++++       .++|++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   81 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV   81 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence            4789999999999999999999999999999999998777666666778999999999999988876       468999


Q ss_pred             EEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC-CCCCCCcHHHHHHHHHHHHHh
Q 024290          153 IDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC-DKHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       153 i~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~-~~~~~~~y~~sK~~~e~~~~~  216 (269)
                      |||||...           ++..+++|+.++..+.+++.    +.+...++++||... ......+|+.+|.+++.+.+.
T Consensus        82 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~~~~Y~asKaal~~ltk~  161 (242)
T d1ulsa_          82 VHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRT  161 (242)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHHHHHHHHHHHH
T ss_pred             EECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCCCcchHHHHHHHHHHHHH
Confidence            99999432           34566789999888777664    345557777777543 344556799999999987653


Q ss_pred             -------cCCCEEEEEcCcccccCcc
Q 024290          217 -------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       217 -------~gi~~~ilrp~~i~g~~~~  235 (269)
                             .||+++.|.||.+.+++..
T Consensus       162 lA~ela~~gIrVN~I~PG~v~T~~~~  187 (242)
T d1ulsa_         162 LALELGRWGIRVNTLAPGFIETRMTA  187 (242)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCTTTS
T ss_pred             HHHHHhhhCcEEEEEeeCcccChhhh
Confidence                   7899999999999887644

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.87  E-value=2.7e-22  Score=173.96  Aligned_cols=151  Identities=19%  Similarity=0.173  Sum_probs=120.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc-c----ccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-D----FLRDWGATVVNADLSKPETIPATLV--GVHTVIDCA  156 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~-~----~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~a  156 (269)
                      |+|||||||||||++|+++|+++||+|++++|...... .    .....+++++++|++|.+.+.+.+.  ..++++|++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            68999999999999999999999999999999754321 1    1123468899999999999988775  467888888


Q ss_pred             CC-------CCCccchhhcHHHHHHHHHHHHHcCCC-eEEEecccCC-------------CCCCCCcHHHHHHHHHHHHH
Q 024290          157 TG-------RPEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNC-------------DKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       157 g~-------~~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~SS~~~-------------~~~~~~~y~~sK~~~e~~~~  215 (269)
                      +.       .....++..|+.++.++++++++.+++ +|++.||..+             +..|.++|+.+|.+.|++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  160 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV  160 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence            73       223455778999999999999998866 6777776532             22456789999999998874


Q ss_pred             ----hcCCCEEEEEcCcccccCc
Q 024290          216 ----DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ----~~gi~~~ilrp~~i~g~~~  234 (269)
                          +.+++++++||+++||+..
T Consensus       161 ~~~~~~~~~~~~lr~~~vyGp~~  183 (321)
T d1rpna_         161 NYRESFGLHASSGILFNHESPLR  183 (321)
T ss_dssp             HHHHHHCCCEEEEEECCEECTTS
T ss_pred             HHHhhcCCcEEEEEEecccCCCc
Confidence                4789999999999999853

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.87  E-value=3.5e-22  Score=177.89  Aligned_cols=154  Identities=19%  Similarity=0.211  Sum_probs=121.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHH-CCCeEEEEeCCC---CCC-------------------ccccccCCCEEEEcCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALD-EGYDVRCLVRPR---PAP-------------------ADFLRDWGATVVNADLSKP  139 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~-~G~~V~~~~R~~---~~~-------------------~~~~~~~~~~~i~~Dl~d~  139 (269)
                      .||||||||+||||++|+++|++ .|++|+++++-.   ...                   ........+.++++|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            46899999999999999999986 689999997411   000                   0001123578999999999


Q ss_pred             CcHHHHhc---CccEEEEcCCCCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC--------------
Q 024290          140 ETIPATLV---GVHTVIDCATGRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--------------  195 (269)
Q Consensus       140 ~~l~~~~~---~~d~vi~~ag~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~--------------  195 (269)
                      +.+.++++   ++|+|||+|+...       .....++|+.++.++++++++.+++++++.|+...              
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence            99988874   6799999998532       33456789999999999999999999999886532              


Q ss_pred             ------CCCCCCcHHHHHHHHHHHHHh----cCCCEEEEEcCcccccCccc
Q 024290          196 ------DKHPEVPLMEIKYCTEQFLQD----SGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       196 ------~~~~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~i~g~~~~~  236 (269)
                            ...|.++|+.+|...|++++.    .|++++++||+++||+....
T Consensus       162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~  212 (383)
T d1gy8a_         162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDG  212 (383)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTS
T ss_pred             ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccc
Confidence                  123567899999999998854    79999999999999986543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.87  E-value=7.6e-22  Score=162.99  Aligned_cols=180  Identities=21%  Similarity=0.282  Sum_probs=134.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCe--EEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYD--VRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~--V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      .|++|||||||||||+++++.|+++|++  |+.+.|++++....  ..+++++.+|+++.+.+.++++++|+|||+++..
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~   79 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--GGEADVFIGDITDADSINPAFQGIDALVILTSAV   79 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc--cCCcEEEEeeeccccccccccccceeeEEEEeec
Confidence            3679999999999999999999999965  66677865433221  2368899999999999999999999999999731


Q ss_pred             C--------------------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCC-------CCcHHHHHHHHHH
Q 024290          160 P--------------------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP-------EVPLMEIKYCTEQ  212 (269)
Q Consensus       160 ~--------------------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~-------~~~y~~sK~~~e~  212 (269)
                      .                    ......+|+.++++++..+.....+++.+.|+.......       ...|...+...+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (252)
T d2q46a1          80 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQ  159 (252)
T ss_dssp             CEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHH
T ss_pred             cccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccchhhhhhhhhh
Confidence            1                    223445788999999999999999999999886653221       2346777888888


Q ss_pred             HHHhcCCCEEEEEcCcccccCcccccceeEeCCCccccccccCCCCcchhccchh
Q 024290          213 FLQDSGLPHVIIRLWPYWAICSTYTRREVCLGNGCTNSNCIHGHSGYSATDIRSF  267 (269)
Q Consensus       213 ~~~~~gi~~~ilrp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvrd~  267 (269)
                      +.++.+++++++||+++||+...............    ......+++..|+.++
T Consensus       160 ~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~----~~~~~~~i~~~Dva~a  210 (252)
T d2q46a1         160 YLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDEL----LQTDTKTVPRADVAEV  210 (252)
T ss_dssp             HHHHSSSCEEEEEECEEECSCTTSSCEEEESTTGG----GGSSCCEEEHHHHHHH
T ss_pred             hhhcccccceeecceEEECCCcchhhhhhccCccc----ccCCCCeEEHHHHHHH
Confidence            88999999999999999999765444332222111    1223456667777665

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.87  E-value=8.7e-23  Score=179.33  Aligned_cols=152  Identities=18%  Similarity=0.177  Sum_probs=119.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc-------ccCCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL-------RDWGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-------~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      .+|+||||||+||||++|+++|+++|++|++++|+.++.....       .......+.+|+.|.+.+.+++.++|.|+|
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~   89 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH   89 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence            4789999999999999999999999999999999754322211       111234577999999999999999999999


Q ss_pred             cCCCCC----CccchhhcHHHHHHHHHHHHHc-CCCeEEEecccCCC---------------------------------
Q 024290          155 CATGRP----EEPIKKVDWEGKVALIQCAKAM-GIQKYVFYSIHNCD---------------------------------  196 (269)
Q Consensus       155 ~ag~~~----~~~~~~~n~~~~~~li~a~~~~-~v~r~V~~SS~~~~---------------------------------  196 (269)
                      +++...    +..++..|+.++.+++++|.+. ++++|||+||..+.                                 
T Consensus        90 ~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~  169 (342)
T d1y1pa1          90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP  169 (342)
T ss_dssp             CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred             hcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCC
Confidence            998432    3345678999999999999886 68999999986420                                 


Q ss_pred             CCCCCcHHHHHHHHHHHH----Hh--cCCCEEEEEcCcccccC
Q 024290          197 KHPEVPLMEIKYCTEQFL----QD--SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       197 ~~~~~~y~~sK~~~e~~~----~~--~gi~~~ilrp~~i~g~~  233 (269)
                      ..+..+|+.+|...|+++    ++  .+++++++||+.+||+.
T Consensus       170 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~  212 (342)
T d1y1pa1         170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTI  212 (342)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCC
T ss_pred             CCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCC
Confidence            001135999999999755    33  35778899999999974

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.87  E-value=2.5e-22  Score=175.34  Aligned_cols=152  Identities=18%  Similarity=0.185  Sum_probs=118.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-----Cccc------cccCCCEEEEcCCCCCCcHHHHhc--Cc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-----PADF------LRDWGATVVNADLSKPETIPATLV--GV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-----~~~~------~~~~~~~~i~~Dl~d~~~l~~~~~--~~  149 (269)
                      .|++||||||||||++|++.|+++||+|++++|..+.     ....      .....++++.+|+++.+.+.+.++  ++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            4789999999999999999999999999999996431     1111      122357789999999999988874  67


Q ss_pred             cEEEEcCCCC-------CCccchhhcHHHHHHHHHHHHHc-----CCCeEEEecccCC------------CCCCCCcHHH
Q 024290          150 HTVIDCATGR-------PEEPIKKVDWEGKVALIQCAKAM-----GIQKYVFYSIHNC------------DKHPEVPLME  205 (269)
Q Consensus       150 d~vi~~ag~~-------~~~~~~~~n~~~~~~li~a~~~~-----~v~r~V~~SS~~~------------~~~~~~~y~~  205 (269)
                      |+|||+|+..       .+....+.|..++.++++++++.     ...++++.||...            +..|.++|+.
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~  160 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA  160 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhH
Confidence            9999999853       23456678899999999998754     2346777776532            2346678999


Q ss_pred             HHHHHHHHH----HhcCCCEEEEEcCcccccCc
Q 024290          206 IKYCTEQFL----QDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       206 sK~~~e~~~----~~~gi~~~ilrp~~i~g~~~  234 (269)
                      +|...|+++    +..+++++++||+++||+..
T Consensus       161 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~  193 (339)
T d1n7ha_         161 SKCAAHWYTVNYREAYGLFACNGILFNHESPRR  193 (339)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEEccccCCCC
Confidence            999999876    44799999999999999853

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.87  E-value=7.2e-22  Score=165.18  Aligned_cols=149  Identities=15%  Similarity=0.157  Sum_probs=120.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-------cCccEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-------VGVHTV  152 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-------~~~d~v  152 (269)
                      ++++|++|||||+++||+++++.|+++|++|++++|+.+...      ++..+++|++|++++++++       .++|++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiL   77 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVL   77 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc------CceEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence            488999999999999999999999999999999999866543      4678899999999888776       468999


Q ss_pred             EEcCCCCC-----------CccchhhcHHHHHHHHH----HHHHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH
Q 024290          153 IDCATGRP-----------EEPIKKVDWEGKVALIQ----CAKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       153 i~~ag~~~-----------~~~~~~~n~~~~~~li~----a~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~  215 (269)
                      |||||...           ++..+++|+.++..+.+    .+++.+.++||++||....  .....+|+.+|.+++.+.+
T Consensus        78 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~  157 (237)
T d1uzma1          78 VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMAR  157 (237)
T ss_dssp             EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHH
T ss_pred             EeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHHHH
Confidence            99999422           34567788888766555    4566677799999998753  3345679999999998765


Q ss_pred             h-------cCCCEEEEEcCcccccCc
Q 024290          216 D-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .       .||+++.|.||.+.+++.
T Consensus       158 ~lA~e~~~~gIrVN~I~PG~v~T~~~  183 (237)
T d1uzma1         158 SIARELSKANVTANVVAPGYIDTDMT  183 (237)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             HHHhhhhcCCceeeeeeeCcCCChhh
Confidence            3       799999999999988754

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.87  E-value=2.4e-22  Score=168.82  Aligned_cols=159  Identities=18%  Similarity=0.128  Sum_probs=126.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC--CCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~--~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      .+++|+++||||+++||+++++.|+++|++|++.+|++++..+..++.  .+.++++|++|++++++++       .++|
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   82 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCe
Confidence            478999999999999999999999999999999999876554433332  4778899999999888776       4689


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~  213 (269)
                      ++|||||...           ++..+++|+.++..+.+++    ++.+-++||++||....  ......|+.+|.+++.+
T Consensus        83 ilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  162 (244)
T d1nffa_          83 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGL  162 (244)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHH
Confidence            9999999432           3355678888877766654    45566799999998653  33446799999999987


Q ss_pred             HH-------hcCCCEEEEEcCcccccCccccc
Q 024290          214 LQ-------DSGLPHVIIRLWPYWAICSTYTR  238 (269)
Q Consensus       214 ~~-------~~gi~~~ilrp~~i~g~~~~~~~  238 (269)
                      .+       ..||+++.|.||.+.+++.....
T Consensus       163 tk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  194 (244)
T d1nffa_         163 TKSTALELGPSGIRVNSIHPGLVKTPMTDWVP  194 (244)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC
T ss_pred             HHHHHHHhcccCEEEEEEeeCCccChhHhhhh
Confidence            65       37999999999999988765443

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.87  E-value=1.9e-22  Score=177.22  Aligned_cols=154  Identities=16%  Similarity=0.141  Sum_probs=122.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHhc--CccEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLV--GVHTVID  154 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~  154 (269)
                      .++|||||||||||||++|++.|+++|++|++++|+.+.....+.    ..+++++.+|++|++.+.++++  .+|+|+|
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~   85 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   85 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhh
Confidence            467999999999999999999999999999999998765544322    2379999999999999988875  5799999


Q ss_pred             cCCCC-------CCccchhhcHHHHHHHHHHHHHcCCC-eEEEecccCC--------------CCCCCCcHHHHHHHHHH
Q 024290          155 CATGR-------PEEPIKKVDWEGKVALIQCAKAMGIQ-KYVFYSIHNC--------------DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       155 ~ag~~-------~~~~~~~~n~~~~~~li~a~~~~~v~-r~V~~SS~~~--------------~~~~~~~y~~sK~~~e~  212 (269)
                      +++..       .+....++|+.++.++++++++.+.. .+++.|+...              ...|..+|+..|...|.
T Consensus        86 ~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~  165 (356)
T d1rkxa_          86 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAEL  165 (356)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHH
T ss_pred             hhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchh
Confidence            99843       23556778999999999999987655 4555554321              12356779999999887


Q ss_pred             HHH-------------hcCCCEEEEEcCcccccCc
Q 024290          213 FLQ-------------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~-------------~~gi~~~ilrp~~i~g~~~  234 (269)
                      .++             ..++.++++||+++||+..
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~  200 (356)
T d1rkxa_         166 VTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD  200 (356)
T ss_dssp             HHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred             hhhHHhhhcccchhccccCceEEeccCCCeeCCCc
Confidence            653             3578999999999999864

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.86  E-value=5.4e-22  Score=166.96  Aligned_cols=155  Identities=15%  Similarity=0.154  Sum_probs=119.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc-cccccC--CCEEEEcCCCCCCcHHHHh-------cCc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-DFLRDW--GATVVNADLSKPETIPATL-------VGV  149 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~-~~~~~~--~~~~i~~Dl~d~~~l~~~~-------~~~  149 (269)
                      .+++|+++||||+++||+++++.|+++|++|++.+|++.+.. +.+++.  .+..+++|++|++++++++       .++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999999999764322 222222  4778999999999988775       479


Q ss_pred             cEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHH
Q 024290          150 HTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       150 d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~  212 (269)
                      |++|||||...           ++..+++|+.++..+.+++    ++.+.++||++||...  +.....+|+.+|.+++.
T Consensus        82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~  161 (247)
T d2ew8a1          82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIG  161 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHH
Confidence            99999999533           3345678888877766654    5566679999999865  33345679999999998


Q ss_pred             HHH-------hcCCCEEEEEcCcccccCc
Q 024290          213 FLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       213 ~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+       ..||+++.|.||++.+++.
T Consensus       162 ltk~lA~ela~~gIrVN~I~PG~i~T~~~  190 (247)
T d2ew8a1         162 FTRALASDLGKDGITVNAIAPSLVRTATT  190 (247)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCC-----
T ss_pred             HHHHHHHHhcccCeEEEEEeeCCCCCccc
Confidence            764       3789999999999987754

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.86  E-value=3.7e-22  Score=168.59  Aligned_cols=154  Identities=13%  Similarity=0.080  Sum_probs=124.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC--CCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~--~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      ++++|++|||||+++||+++++.|+++|++|++.+|+.++..+..++.  .+.++++|++|++++++++       .++|
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCcc
Confidence            478999999999999999999999999999999999876655544443  4788999999999988876       4789


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      ++|||||...           ++..+++|+.++..+.+++    ++.+.++||++||...  .......|+.+|.+++.+
T Consensus        82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~l  161 (254)
T d1hdca_          82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGL  161 (254)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHH
Confidence            9999999532           3345678888877766655    5556679999999865  333456799999999987


Q ss_pred             HH-------hcCCCEEEEEcCcccccC
Q 024290          214 LQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       214 ~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      .+       ..||+++.|.||++.+++
T Consensus       162 t~~lA~e~a~~gIrVN~I~PG~v~T~~  188 (254)
T d1hdca_         162 SKLAAVELGTDRIRVNSVHPGMTYTPM  188 (254)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             HHHHHHHhCCCceEEEEeeeCcccCcc
Confidence            64       378999999999998764

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.86  E-value=2.7e-22  Score=168.93  Aligned_cols=152  Identities=13%  Similarity=0.052  Sum_probs=123.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-------cCccEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-------VGVHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-------~~~d~vi  153 (269)
                      +++|++|||||+++||+++++.|+++|++|++.+|+++. .+..+..+..++++|++|++++++++       .++|++|
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~-~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            689999999999999999999999999999999997653 33444557889999999999888776       4799999


Q ss_pred             EcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH-
Q 024290          154 DCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ-  215 (269)
Q Consensus       154 ~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~-  215 (269)
                      ||||...           ++..+++|+.++.++.+++    ++.+-++||++||....  .....+|+.+|.+++.+.+ 
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~  161 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRS  161 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHH
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHHH
Confidence            9999432           3345678888887776665    45566799999998653  3445679999999998764 


Q ss_pred             ------hcCCCEEEEEcCcccccC
Q 024290          216 ------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 ------~~gi~~~ilrp~~i~g~~  233 (269)
                            ..||+++.|.||.+.+++
T Consensus       162 lA~el~~~gIrVN~I~PG~v~T~~  185 (248)
T d2d1ya1         162 LALDLAPLRIRVNAVAPGAIATEA  185 (248)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             HHHHhhhhCcEEEEEeeCCCCCch
Confidence                  379999999999998764

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.86  E-value=7e-22  Score=169.64  Aligned_cols=149  Identities=19%  Similarity=0.279  Sum_probs=122.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc-------cccccCCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-------DFLRDWGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~-------~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      ++||||||||||||++|+++|+++|++|++++|+.....       ..+...+++++++|+.|.+.+.+++.+.+.++++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~   82 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   82 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence            567999999999999999999999999999999754322       1123457999999999999999999999999999


Q ss_pred             CCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-------CCCCCCcHHHHHHHHHHHHHhcCCCEEEEEcCc
Q 024290          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------DKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWP  228 (269)
Q Consensus       156 ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-------~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~  228 (269)
                      ++...    ...|..+..++++++++.+..++++.|+.+.       +..+...|...|..++++.+..+++++++||+.
T Consensus        83 ~~~~~----~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~  158 (312)
T d1qyda_          83 LAGGV----LSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNM  158 (312)
T ss_dssp             CCCSS----SSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCE
T ss_pred             hhhcc----cccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEeccce
Confidence            87432    2356667788999999998888888887654       223445688899999999999999999999999


Q ss_pred             ccccCcc
Q 024290          229 YWAICST  235 (269)
Q Consensus       229 i~g~~~~  235 (269)
                      +||+...
T Consensus       159 ~~g~~~~  165 (312)
T d1qyda_         159 FAGYFAG  165 (312)
T ss_dssp             EHHHHTT
T ss_pred             eecCCcc
Confidence            9997544

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7e-22  Score=165.98  Aligned_cols=155  Identities=15%  Similarity=0.066  Sum_probs=123.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHHhc---CccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV---GVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~~---~~d~vi~~  155 (269)
                      .+++|++|||||+++||+++++.|+++|++|++++|+.++..+..++ .++..+.+|++|+++++++++   ++|++|||
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            47899999999999999999999999999999999987655444333 368899999999999988874   68999999


Q ss_pred             CCCCC-----------CccchhhcHHHHHHHHHHHH-----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh-
Q 024290          156 ATGRP-----------EEPIKKVDWEGKVALIQCAK-----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD-  216 (269)
Q Consensus       156 ag~~~-----------~~~~~~~n~~~~~~li~a~~-----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~-  216 (269)
                      ||...           ++..+++|+.++..+.+++.     +.+.++||++||....  ......|+.+|.+++.+.+. 
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  163 (244)
T d1pr9a_          84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVM  163 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHH
Confidence            99533           23456688888777666542     3345699999998653  33345799999999987653 


Q ss_pred             ------cCCCEEEEEcCcccccCc
Q 024290          217 ------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 ------~gi~~~ilrp~~i~g~~~  234 (269)
                            .||+++.|.||.+.+++.
T Consensus       164 A~el~~~gIrvN~I~PG~v~T~~~  187 (244)
T d1pr9a_         164 ALELGPHKIRVNAVNPTVVMTSMG  187 (244)
T ss_dssp             HHHHGGGTEEEEEEEECCBCSHHH
T ss_pred             HHHhCCCcEEEEEEeeCcCcChHH
Confidence                  789999999999988753

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=6.4e-22  Score=166.02  Aligned_cols=155  Identities=14%  Similarity=0.032  Sum_probs=123.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHHhc---CccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLV---GVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~~---~~d~vi~~  155 (269)
                      ++++|++|||||+++||+++++.|+++|++|++++|+.++..+..++ .++..+.+|++|+++++++++   ++|++|||
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn   81 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   81 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence            47899999999999999999999999999999999986655443333 368899999999999988875   68999999


Q ss_pred             CCCCC-----------CccchhhcHHHHHHHHHHHH----H-cCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh-
Q 024290          156 ATGRP-----------EEPIKKVDWEGKVALIQCAK----A-MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD-  216 (269)
Q Consensus       156 ag~~~-----------~~~~~~~n~~~~~~li~a~~----~-~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~-  216 (269)
                      ||...           ++..+++|+.++..+.+++.    + .+.+++|++||....  ......|+.+|.+++.+.+. 
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  161 (242)
T d1cyda_          82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAM  161 (242)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHHHH
Confidence            99533           23456688888887776553    2 244689999998643  33345799999999987753 


Q ss_pred             ------cCCCEEEEEcCcccccCc
Q 024290          217 ------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 ------~gi~~~ilrp~~i~g~~~  234 (269)
                            .||+++.|.||++.+++.
T Consensus       162 A~e~~~~gIrvN~I~PG~i~T~~~  185 (242)
T d1cyda_         162 AMELGPHKIRVNSVNPTVVLTDMG  185 (242)
T ss_dssp             HHHHGGGTEEEEEEEECCBTTHHH
T ss_pred             HHHhCccCeecccCCCCCccCHHH
Confidence                  789999999999987643

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.86  E-value=6.8e-22  Score=166.74  Aligned_cols=155  Identities=15%  Similarity=0.111  Sum_probs=121.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----c--CCCEEEEcCCCCCCcHHHHh-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----D--WGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~--~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      ++++|+++||||+++||+++++.|+++|++|++.+|+.++..+...    .  ..+..+++|++|++++++++       
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999998665433221    1  24678899999999888776       


Q ss_pred             cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC-C-C-CCCCcHHHHHH
Q 024290          147 VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC-D-K-HPEVPLMEIKY  208 (269)
Q Consensus       147 ~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~-~-~-~~~~~y~~sK~  208 (269)
                      .++|++|||||...           ++..+++|+.++..+.+++    ++.+.+++|+++|... . . ....+|+.+|.
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKa  161 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKG  161 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHH
Confidence            47999999999533           2345668888877766665    4456679999988643 2 2 23457999999


Q ss_pred             HHHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+       ..|++++.|.||++.+++.
T Consensus       162 al~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~  194 (251)
T d1vl8a_         162 GVASLTKALAKEWGRYGIRVNVIAPGWYRTKMT  194 (251)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTT
T ss_pred             hHHHHHHHHHHHhcccCeEEEEEeeCcccCHHH
Confidence            9998765       3799999999999988754

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.9e-22  Score=166.98  Aligned_cols=153  Identities=16%  Similarity=0.193  Sum_probs=122.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHHh-------cCccE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATL-------VGVHT  151 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~-------~~~d~  151 (269)
                      .+++|+++||||+++||+++++.|+++|++|++.+|+++...+..++ .++.++.+|++|++++++++       .++|+
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            57899999999999999999999999999999999986654443332 35788999999999988876       46899


Q ss_pred             EEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          152 VIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       152 vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      +|||||...            ++..+++|+.++..+.+++    ++.+ +++|++||...  ......+|+.+|.+++.+
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  161 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAM  161 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCcchhHHHHhhHHHH
Confidence            999999421            2345678888877766655    4444 69999999764  344556899999999987


Q ss_pred             HH-------hcCCCEEEEEcCcccccC
Q 024290          214 LQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       214 ~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      .+       ..||+++.|.||++.+++
T Consensus       162 t~~lA~e~a~~gIrVN~I~PG~i~T~~  188 (250)
T d1ydea1         162 TKALALDESPYGVRVNCISPGNIWTPL  188 (250)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             HHHHHHHhcccCeEEEEEeeCCCCChh
Confidence            64       379999999999997764

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=2.5e-22  Score=168.64  Aligned_cols=154  Identities=12%  Similarity=0.055  Sum_probs=123.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHh-------cCccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATL-------VGVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~-------~~~d~  151 (269)
                      +++|+++||||+++||+++++.|+++|++|++.+|+++...+..++  .++..+.+|++|++++++++       .++|+
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            6799999999999999999999999999999999986654443322  24678899999999888776       36899


Q ss_pred             EEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 024290          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       152 vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~  214 (269)
                      +|||||...           ++..+++|+.++..+.+++    ++.+-++||++||...  +.....+|+.+|.+++.+.
T Consensus        82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt  161 (243)
T d1q7ba_          82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFS  161 (243)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHH
Confidence            999999432           3345678888877766655    5556679999999764  3444568999999999876


Q ss_pred             Hh-------cCCCEEEEEcCcccccCc
Q 024290          215 QD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       215 ~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.       .||+++.|.||.+.+++.
T Consensus       162 ~~lA~ela~~gIrVN~I~PG~i~T~~~  188 (243)
T d1q7ba_         162 KSLAREVASRGITVNVVAPGFIETDMT  188 (243)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             HHHHHHhCccCeEEEEEecceEechhh
Confidence            53       799999999999987643

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.86  E-value=5.9e-22  Score=167.58  Aligned_cols=154  Identities=13%  Similarity=0.064  Sum_probs=122.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      .+++|+++||||+++||+++++.|+++|++|++.+|+.++..+..++  .++..+.+|++|++++++++       .++|
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iD   81 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSID   81 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            47899999999999999999999999999999999986655444433  25778899999999988876       4789


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----Hc-CCCeEEEecccCCC--CCCCCcHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AM-GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQ  212 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~-~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~  212 (269)
                      ++|||||...           ++..+++|+.++..+.+++.    +. ..++||++||....  ......|+.+|.+++.
T Consensus        82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  161 (256)
T d1k2wa_          82 ILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVIS  161 (256)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHH
Confidence            9999999432           33456788888887776542    22 34699999998653  3344679999999998


Q ss_pred             HHH-------hcCCCEEEEEcCcccccC
Q 024290          213 FLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       213 ~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +.+       ..||+++.|.||++-++.
T Consensus       162 lt~~lA~el~~~gIrVN~V~PG~i~T~~  189 (256)
T d1k2wa_         162 LTQSAGLNLIRHGINVNAIAPGVVDGEH  189 (256)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred             HHHHHHHHhcccCeEEEEEecCCCCchh
Confidence            764       379999999999998765

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.85  E-value=6e-22  Score=167.83  Aligned_cols=156  Identities=17%  Similarity=0.090  Sum_probs=116.9

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-----CCCEEEEcCCCCCCcHHHHh-------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-----WGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-----~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      .++++|+++||||+++||+++++.|+++|++|++++|+.++..+..++     .++..+.+|++|++++++++       
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            468899999999999999999999999999999999986654433221     25788999999998887765       


Q ss_pred             -cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHH
Q 024290          147 -VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (269)
Q Consensus       147 -~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~  208 (269)
                       ..+|++|||||...           ++..+++|+.++..+.+++    ++.+.++||++||...  .......|+.+|.
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  163 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKG  163 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHH
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccccccc
Confidence             24899999999422           3456678999887766655    5567789999999865  3344567999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+.       .||+++.|.||.+.+++.
T Consensus       164 al~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~  196 (259)
T d1xq1a_         164 ALNQLARNLACEWASDGIRANAVAPAVIATPLA  196 (259)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEECCSCC----
T ss_pred             chhhhhHHHHHHhcccCeEEEEeccCcccCHHh
Confidence            99987653       799999999999988754

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.85  E-value=9.9e-22  Score=166.38  Aligned_cols=153  Identities=14%  Similarity=0.076  Sum_probs=121.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHh-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      +++|+++||||+++||+++++.|+++|++|++.+|+.++..+...       ...+..+++|++|++++++++       
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            678999999999999999999999999999999998654332211       124678899999999988776       


Q ss_pred             cCccEEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHH
Q 024290          147 VGVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKY  208 (269)
Q Consensus       147 ~~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~  208 (269)
                      .++|++|||||...            ++..+++|+.++..+.+++    ++.+-++||++||....  .....+|+.+|.
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  161 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKH  161 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHH
T ss_pred             CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHH
Confidence            47999999999421            2345668888888777655    45567799999998653  334567999999


Q ss_pred             HHHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          209 CTEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       209 ~~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +++.+.+       ..||+++.|.||.+.+++
T Consensus       162 al~~lt~~lA~el~~~gIrVN~i~PG~v~T~~  193 (258)
T d1iy8a_         162 GVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM  193 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             HHHHHHHHHHHHhCccCceEEEEeeCcccCHH
Confidence            9988764       379999999999998764

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.85  E-value=9e-22  Score=166.82  Aligned_cols=154  Identities=15%  Similarity=0.072  Sum_probs=118.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-ccc---c-c--cCCCEEEEcCCCCCCcHHHHh-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-ADF---L-R--DWGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~---~-~--~~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      |++|++|||||+++||+++++.|+++|++|++.+|++... .+.   + .  ...+.++.+|++|++++++++       
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            6789999999999999999999999999999999975322 111   1 1  125778899999999988876       


Q ss_pred             cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCCC--CCCCCcHHHHHHH
Q 024290          147 VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNCD--KHPEVPLMEIKYC  209 (269)
Q Consensus       147 ~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~  209 (269)
                      .++|++|||||...           ++..+++|+.++..+.++    +++.+-++||++||....  .....+|+.+|.+
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  161 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHG  161 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhh
Confidence            46899999999432           334566888887665555    456666799999998653  3344679999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+.       .||+++.|.||++.+++.
T Consensus       162 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~  193 (260)
T d1x1ta1         162 VVGFTKVTALETAGQGITANAICPGWVRTPLV  193 (260)
T ss_dssp             HHHHHHHHHHHHTTTTEEEEEEEECCBCC---
T ss_pred             HHHhHHHHHHHhchhCcEEEEEecCCCCChhh
Confidence            9987653       789999999999987753

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.85  E-value=6.1e-22  Score=167.02  Aligned_cols=156  Identities=15%  Similarity=0.094  Sum_probs=121.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cccC--CCEEEEcCCCCCCcHHHHh-------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDW--GATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~--~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      .+++|++|||||+++||+++++.|+++|++|++.+|+.++..+.   +++.  .+..+.+|++|++++.+++       .
T Consensus         7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   86 (251)
T d2c07a1           7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK   86 (251)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999986544332   2222  4788999999999988776       4


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      ++|++|||||...           ++..+++|+.++..+.++    +++.+.++||++||...  +.....+|+.+|.++
T Consensus        87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal  166 (251)
T d2c07a1          87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV  166 (251)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHH
Confidence            7899999999422           334566888777666654    45566789999999764  344456899999999


Q ss_pred             HHHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          211 EQFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       211 e~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      +.+.+       ..||+++.|.||++.+++..
T Consensus       167 ~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~  198 (251)
T d2c07a1         167 IGFTKSLAKELASRNITVNAIAPGFISSDMTD  198 (251)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCC----
T ss_pred             HHHHHHHHHHhhhhCeEEEEEccCCEeccccc
Confidence            98765       37999999999999887644

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.85  E-value=1.9e-21  Score=168.98  Aligned_cols=150  Identities=16%  Similarity=0.179  Sum_probs=118.6

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-c----cccccCCCEEEEcCCCCCCcHHHHhcC--ccEEEEcCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-A----DFLRDWGATVVNADLSKPETIPATLVG--VHTVIDCAT  157 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~----~~~~~~~~~~i~~Dl~d~~~l~~~~~~--~d~vi~~ag  157 (269)
                      ||||||||||||++|+++|+++|++|+++++-.... .    ......+++++.+|++|.+.+.+++++  +|+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            799999999999999999999999999997532221 1    111234789999999999999999865  599999998


Q ss_pred             CCC-------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC------------------------------CCCCC
Q 024290          158 GRP-------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC------------------------------DKHPE  200 (269)
Q Consensus       158 ~~~-------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~------------------------------~~~~~  200 (269)
                      ...       +..+.++|+.|+.+|++++.+.+++++|+.||...                              ...+.
T Consensus        82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T d1orra_          82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH  161 (338)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC
T ss_pred             cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccc
Confidence            532       35667899999999999999999887777766431                              11234


Q ss_pred             CcHHHHHHHHHHHH----HhcCCCEEEEEcCcccccCc
Q 024290          201 VPLMEIKYCTEQFL----QDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       201 ~~y~~sK~~~e~~~----~~~gi~~~ilrp~~i~g~~~  234 (269)
                      ..|+..|...|.++    +..++...++|+..+|++..
T Consensus       162 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (338)
T d1orra_         162 SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQ  199 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTC
T ss_pred             cccccccchhhhhhhhhhhccCcccccccccceeeccc
Confidence            56899999998775    45799999999999987643

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.84  E-value=1.4e-21  Score=165.45  Aligned_cols=155  Identities=17%  Similarity=0.073  Sum_probs=122.4

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c--CCCEEEEcCCCCCCcHHHHh-------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D--WGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~--~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      .++++|++|||||+++||+++++.|+++|++|++.+|+.++..+..+   .  ..+.++.+|++|++++++++       
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            35889999999999999999999999999999999998665443322   2  24678899999998887765       


Q ss_pred             c-CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHH
Q 024290          147 V-GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (269)
Q Consensus       147 ~-~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~  208 (269)
                      . .+|++|||||...           ++..+++|+.++..+.+++    ++.+-++||++||...  ......+|+.+|.
T Consensus        84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  163 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKG  163 (259)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHH
Confidence            2 4899999999432           3346678888877766654    5556679999999765  3344567999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +++.+.+.       .||+++.|.||.+.+++
T Consensus       164 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~  195 (259)
T d2ae2a_         164 AMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL  195 (259)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEECSBCSHH
T ss_pred             HHHHHHHHHHHHhCcCceEEEEeeeCcccCHH
Confidence            99987753       78999999999998764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.4e-21  Score=165.24  Aligned_cols=154  Identities=12%  Similarity=0.063  Sum_probs=121.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---ccC--CCEEEEcCCCCCCcHHHHh-------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RDW--GATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~--~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      .+++|+++||||+++||+++++.|+++|++|++.+|+.++..+..   ++.  .+.++++|++|++++++++       .
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g   87 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999865443322   222  4778999999999887775       4


Q ss_pred             CccEEEEcCCCCC----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          148 GVHTVIDCATGRP----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       148 ~~d~vi~~ag~~~----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      ++|++|||||...          ++..+++|+.++..+.+++    ++.+.+++|++||...  ......+|+.+|.+++
T Consensus        88 ~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~  167 (255)
T d1fmca_          88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAAS  167 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred             CCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHH
Confidence            7999999999432          3345668888877766654    4556678999998764  3344568999999999


Q ss_pred             HHHH-------hcCCCEEEEEcCcccccC
Q 024290          212 QFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       212 ~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      .+.+       ..||+++.|.||.+.++.
T Consensus       168 ~lt~~lA~el~~~gIrVN~I~PG~i~T~~  196 (255)
T d1fmca_         168 HLVRNMAFDLGEKNIRVNGIAPGAILTDA  196 (255)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred             HHHHHHHHHhCccCeEEEEeeeCcCcChH
Confidence            8764       378999999999998764

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.84  E-value=2.4e-21  Score=163.33  Aligned_cols=155  Identities=13%  Similarity=0.020  Sum_probs=120.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHh-------cC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATL-------VG  148 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~-------~~  148 (269)
                      .+++|++|||||+++||+++++.|+++|++|++.+|+.+...+..+    ..++.++++|++|++++++++       .+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999999999998654332221    235788999999999888776       47


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCC-eEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQ-KYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~-r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      +|++|||||...           ++..+++|+.++..+.+++    ++.+.+ +||++||...  +......|+.+|.++
T Consensus        83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal  162 (251)
T d1zk4a1          83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV  162 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHH
Confidence            899999999432           2346678988888877765    344544 8999999764  233345799999998


Q ss_pred             HHHHH---------hcCCCEEEEEcCcccccCc
Q 024290          211 EQFLQ---------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~---------~~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.+         ..||+++.|.||.+.+++.
T Consensus       163 ~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~  195 (251)
T d1zk4a1         163 RIMSKSAALDCALKDYDVRVNTVHPGYIKTPLV  195 (251)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHH
T ss_pred             hcchHHHHHHHhcCCCcEEEEEEeCCCCCChhH
Confidence            76543         3589999999999987653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.84  E-value=2.7e-20  Score=163.44  Aligned_cols=148  Identities=23%  Similarity=0.270  Sum_probs=122.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc--cccccCCCEEEEcCCCCCCc-HHHHhcCccEEEEcCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA--DFLRDWGATVVNADLSKPET-IPATLVGVHTVIDCATG  158 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~--~~~~~~~~~~i~~Dl~d~~~-l~~~~~~~d~vi~~ag~  158 (269)
                      ++|+|+||||||+||++|+++|+++||+|++++|++.+..  ......+++++++|+.|..+ +..+++++|+++++...
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~   81 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   81 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence            4689999999999999999999999999999999876532  22234589999999998654 67788999999988653


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC----CCCCCCcHHHHHHHHHHHHHhcCCCEEEEEcCcccccCc
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC----DKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~----~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~i~g~~~  234 (269)
                      .     ...++..+.+++++++++|+.++|+.||...    ...+..+|..+|...++++++.+++++++||+.+++++.
T Consensus        82 ~-----~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~~~~~~~  156 (350)
T d1xgka_          82 Q-----AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFT  156 (350)
T ss_dssp             T-----TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSSSCEEEEEECEEGGGCB
T ss_pred             c-----cchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcccchhhhhhHHHHHHHHHhhccCceeeeeceeecccc
Confidence            2     2346778899999999999988888888653    344556788999999999999999999999999998754

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.84  E-value=1.6e-21  Score=165.34  Aligned_cols=155  Identities=14%  Similarity=0.057  Sum_probs=120.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc----cccccC--CCEEEEcCCCCCCcHHHHh-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLRDW--GATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~----~~~~~~--~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      ++++|+++||||+++||+++++.|+++|++|++.+|+.++..    +.+++.  .+..+++|++|++++++++       
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999764321    122222  4678899999999988776       


Q ss_pred             cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCC-eEEEecccCC--CCCCCCcHHHHHH
Q 024290          147 VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQ-KYVFYSIHNC--DKHPEVPLMEIKY  208 (269)
Q Consensus       147 ~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~-r~V~~SS~~~--~~~~~~~y~~sK~  208 (269)
                      .++|++|||||...           ++..+++|+.++..+.+++    ++.+.+ .||++||...  +......|+.+|.
T Consensus        84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKa  163 (261)
T d1geea_          84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKG  163 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCc
Confidence            47899999999532           3345678888877766554    455544 5889998764  2334567999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+.       .||+++.|.||.+.+++.
T Consensus       164 al~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~  196 (261)
T d1geea_         164 GMKLMTETLALEYAPKGIRVNNIGPGAINTPIN  196 (261)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGG
T ss_pred             cchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhH
Confidence            99987653       799999999999987753

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.84  E-value=2.1e-21  Score=164.54  Aligned_cols=153  Identities=14%  Similarity=0.066  Sum_probs=120.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cccC--CCEEEEcCCCCCCcHHHHh-------cC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDW--GATVVNADLSKPETIPATL-------VG  148 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~--~~~~i~~Dl~d~~~l~~~~-------~~  148 (269)
                      +++|+++||||+++||+++++.|+++|++|++++|+.+...+.   +++.  .+..+.+|++|++++++++       .+
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999999986544332   2222  4678999999999888776       47


Q ss_pred             ccEEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          149 VHTVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       149 ~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      +|++|||||...            ++..+++|+.++..+.+++    ++.+-++||++||...  +.....+|+.+|.++
T Consensus        83 iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal  162 (260)
T d1zema1          83 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAI  162 (260)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHH
T ss_pred             CCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHH
Confidence            999999999432            2345568888877766655    4456679999999764  333445799999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccC
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+.+.       .||+++.|.||.+.+++
T Consensus       163 ~~ltk~lA~el~~~gIrVN~I~PG~v~T~~  192 (260)
T d1zema1         163 IALTETAALDLAPYNIRVNAISPGYMGPGF  192 (260)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSSH
T ss_pred             HHHHHHHHHHhhhhCCEEEEeccCcccCcc
Confidence            987653       78999999999998764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.83  E-value=6.8e-21  Score=162.30  Aligned_cols=147  Identities=23%  Similarity=0.353  Sum_probs=119.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc--------ccccCCCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD--------FLRDWGATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~--------~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      ++|||||||||||||++++++|+++|++|++++|+......        .+...+++++.+|+.+.+.+.+.+++.+.++
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            36889999999999999999999999999999997654322        1234578999999999999999999999999


Q ss_pred             EcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCC------CCcHHHHHHHHHHHHHhcCCCEEEEEcC
Q 024290          154 DCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHP------EVPLMEIKYCTEQFLQDSGLPHVIIRLW  227 (269)
Q Consensus       154 ~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~------~~~y~~sK~~~e~~~~~~gi~~~ilrp~  227 (269)
                      |+++.        .+..++.+++++++..+++++++.|+.......      ...+...+...+.++++.+++++++||+
T Consensus        82 ~~~~~--------~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~  153 (307)
T d1qyca_          82 STVGS--------LQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSN  153 (307)
T ss_dssp             ECCCG--------GGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECC
T ss_pred             ecccc--------cccchhhHHHHHHHHhccccceeeeccccccccccccccccccccccccccchhhccCCCceecccc
Confidence            99873        234455678899999999999999887543221      1235677788889999999999999999


Q ss_pred             cccccCccc
Q 024290          228 PYWAICSTY  236 (269)
Q Consensus       228 ~i~g~~~~~  236 (269)
                      ++||+....
T Consensus       154 ~v~g~~~~~  162 (307)
T d1qyca_         154 CFAGYFLRS  162 (307)
T ss_dssp             EEHHHHTTT
T ss_pred             eecCCCccc
Confidence            999986543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=9.3e-22  Score=165.15  Aligned_cols=155  Identities=12%  Similarity=-0.010  Sum_probs=121.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---ccC--CCEEEEcCCCCCCcHHHHh-------c
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RDW--GATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~--~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      ++.+|+++||||+++||++++++|+++|++|++++|+.++..+..   ...  ++..+.||++|++++.+++       .
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG   83 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            588999999999999999999999999999999999876543332   222  4778999999999888776       4


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCCCCC--CCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNCDKH--PEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~~~~--~~~~y~~sK~~~  210 (269)
                      ++|++|||||...           ++..+++|+.++..++++    +++.+.++||++||......  ....|+.+|+++
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal  163 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAA  163 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHH
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHH
Confidence            6899999999432           334567888887766554    45667789999999876322  234699999998


Q ss_pred             HHHHHh----------cCCCEEEEEcCcccccCc
Q 024290          211 EQFLQD----------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       211 e~~~~~----------~gi~~~ilrp~~i~g~~~  234 (269)
                      +.+.+.          .|++++.|.||++-+++.
T Consensus       164 ~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~  197 (244)
T d1yb1a_         164 VGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI  197 (244)
T ss_dssp             HHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCST
T ss_pred             HHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhh
Confidence            877532          479999999999987653

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.83  E-value=1.2e-21  Score=165.87  Aligned_cols=151  Identities=19%  Similarity=0.114  Sum_probs=120.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---ccC--CCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RDW--GATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~--~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      +|.+|||||+++||+++++.|+++|++|++.+|+.++..+..   ++.  .+..+++|++|++++++++       .++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            688999999999999999999999999999999865543322   222  4788999999999988776       4689


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHH------cCCCeEEEecccCC--CCCCCCcHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKA------MGIQKYVFYSIHNC--DKHPEVPLMEIKYCTE  211 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~------~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e  211 (269)
                      ++|||||...           ++..+++|+.++..+.+++.+      .+.++||++||...  +.....+|+.+|.+++
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~  161 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV  161 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHH
Confidence            9999999432           345677899999998887743      35568999988764  3344567999999999


Q ss_pred             HHHHh-------cCCCEEEEEcCcccccC
Q 024290          212 QFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       212 ~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      .+.+.       .||+++.|.||++.+++
T Consensus       162 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~  190 (257)
T d2rhca1         162 GFTKALGLELARTGITVNAVCPGFVETPM  190 (257)
T ss_dssp             HHHHHHHHHTTTSEEEEEEEEECSBCSHH
T ss_pred             HHHHHHHHHhhhhCcEEEEEeeCCCCCHH
Confidence            88753       68999999999997754

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.83  E-value=2.7e-21  Score=164.50  Aligned_cols=155  Identities=10%  Similarity=0.028  Sum_probs=120.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc---c-CCCEEEEcCCCCCCcHHHHh-------cC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR---D-WGATVVNADLSKPETIPATL-------VG  148 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~-~~~~~i~~Dl~d~~~l~~~~-------~~  148 (269)
                      .+++|++|||||+++||+++++.|+++|++|++++|+.++..+..+   . ..+.++.+|++|++++++++       .+
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999999998655433222   1 24678899999999988876       47


Q ss_pred             ccEEEEcCCCCC-------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCC-CcHHHHHH
Q 024290          149 VHTVIDCATGRP-------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPE-VPLMEIKY  208 (269)
Q Consensus       149 ~d~vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~-~~y~~sK~  208 (269)
                      +|++|||||...             ++..+++|+.++..+.+++    ++.+.+++|++||....  ..+. ..|+.+|.
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKa  162 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKH  162 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHH
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHH
Confidence            899999998421             2234568888877766655    44566799999887542  2233 36999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+.       .||+++.|.||.+.+++.
T Consensus       163 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~  195 (268)
T d2bgka1         163 AVLGLTTSLCTELGEYGIRVNCVSPYIVASPLL  195 (268)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCC
T ss_pred             HHHhCHHHHHHHhChhCeEEEecCCCCccChHH
Confidence            99987653       799999999999988754

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.1e-20  Score=162.98  Aligned_cols=154  Identities=10%  Similarity=0.080  Sum_probs=120.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c-------cCCCEEEEcCCCCCCcHHHHh---
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R-------DWGATVVNADLSKPETIPATL---  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~-------~~~~~~i~~Dl~d~~~l~~~~---  146 (269)
                      .+++|++|||||+++||+++++.|+++|++|++.+|+.++..+..   .       ...+..+.+|++|++++++++   
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            489999999999999999999999999999999999865432211   1       125778899999999988776   


Q ss_pred             ----cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC-CCCCCcHHHH
Q 024290          147 ----VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD-KHPEVPLMEI  206 (269)
Q Consensus       147 ----~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~-~~~~~~y~~s  206 (269)
                          .++|++|||||...           ++..+++|+.++..+.+++.    +.+.+++|++|+.... ......|+.+
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~~~~~Y~as  168 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAA  168 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTTCHHHHHH
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccccccccchhH
Confidence                47899999999432           34566789888888777663    3455688888765443 3344579999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      |.+++.+.+.       .||+++.|.||.+.++.
T Consensus       169 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  202 (297)
T d1yxma1         169 RAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT  202 (297)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred             HHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcc
Confidence            9999987753       78999999999998764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.83  E-value=4.5e-21  Score=162.27  Aligned_cols=156  Identities=17%  Similarity=0.073  Sum_probs=119.7

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---cc--CCCEEEEcCCCCCCcHHHHh-------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RD--WGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~--~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      .++++|++|||||+++||+++++.|+++|++|++++|++++..+..   .+  ..+.++.+|+++.+++++++       
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            3588999999999999999999999999999999999865543322   22  24677899999999887765       


Q ss_pred             -cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHH
Q 024290          147 -VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (269)
Q Consensus       147 -~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~  208 (269)
                       ..+|++|||||...           +...+++|+.++..+.+++    ++.+.+++|++||...  +......|+.+|.
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  161 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKG  161 (258)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHH
Confidence             24799999999432           3345668888877766654    4556779999999875  3344567999999


Q ss_pred             HHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+.       .||++++|.||.+.+++.
T Consensus       162 al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~  194 (258)
T d1ae1a_         162 AINQMTKSLACEWAKDNIRVNSVAPGVILTPLV  194 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC----
T ss_pred             HHHHHHHHHHHhcCcCcEEEEEEeeCcccCcch
Confidence            99987653       689999999999988753

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.82  E-value=7.1e-21  Score=160.77  Aligned_cols=150  Identities=18%  Similarity=0.157  Sum_probs=117.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---ccC--CCEEEEcCCCCCCcHHHHh-------cCccE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---RDW--GATVVNADLSKPETIPATL-------VGVHT  151 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~--~~~~i~~Dl~d~~~l~~~~-------~~~d~  151 (269)
                      |.+|||||+++||+++++.|+++|++|++.+|++++..+..   .+.  .+..+++|++|++++++++       .++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            55799999999999999999999999999999865543322   222  4778899999999988776       47999


Q ss_pred             EEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcC-CCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMG-IQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       152 vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~-v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      +|||||...           ++..+++|+.++..+++++    ++.+ .++||++||...  +......|+.+|.+++.+
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  161 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGL  161 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHhh
Confidence            999999533           3445678988988877765    3333 457999998764  333445799999999987


Q ss_pred             HH-------hcCCCEEEEEcCcccccC
Q 024290          214 LQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       214 ~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      .+       ..||+++.|.||.+.+++
T Consensus       162 tk~lA~el~~~gIrVN~I~PG~i~T~~  188 (255)
T d1gega_         162 TQTAARDLAPLGITVNGYCPGIVKTPM  188 (255)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             HHHHHHHhhhhCcEEEEEecCcccChH
Confidence            65       379999999999997764

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=6.1e-21  Score=161.09  Aligned_cols=152  Identities=13%  Similarity=0.021  Sum_probs=118.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc---c----cCCCEEEEcCCCCCCcHHHHh-------c
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL---R----DWGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~----~~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      .+|++|||||+++||+++++.|+++|++|++++|+.++..+..   .    ..++.++.+|++|++++++++       .
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999999865433221   1    124778999999999888776       4


Q ss_pred             CccEEEEcCCCC---CCccchhhcHHHHHHHHHHHH----HcC---CCeEEEecccCC--CCCCCCcHHHHHHHHHHHHH
Q 024290          148 GVHTVIDCATGR---PEEPIKKVDWEGKVALIQCAK----AMG---IQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       148 ~~d~vi~~ag~~---~~~~~~~~n~~~~~~li~a~~----~~~---v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~  215 (269)
                      ++|++|||||..   +++..+++|+.++..+.+++.    +.+   .++||++||...  +.....+|+.+|.+++.+.+
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr  161 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR  161 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHH
Confidence            789999999954   345667788888776655553    332   247999999865  33344579999999887643


Q ss_pred             ---------hcCCCEEEEEcCcccccC
Q 024290          216 ---------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       216 ---------~~gi~~~ilrp~~i~g~~  233 (269)
                               ..|++++.|.||.+.+++
T Consensus       162 s~ala~e~~~~gIrVN~I~PG~i~T~~  188 (254)
T d2gdza1         162 SAALAANLMNSGVRLNAICPGFVNTAI  188 (254)
T ss_dssp             HHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred             HHHHHHHhcCCCEEEEEEEcCCCCChh
Confidence                     378999999999997764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.82  E-value=7e-20  Score=152.67  Aligned_cols=150  Identities=17%  Similarity=0.136  Sum_probs=116.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCC-CcHHHHhcCccEEEEcCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP-ETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~-~~l~~~~~~~d~vi~~ag~~  159 (269)
                      +++|++|||||+++||+++++.|+++|++|++.+|+++.    +++.+.+++.+|+++. +.+.+.+.++|++|||||..
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~----l~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~   77 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL----LKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGP   77 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH----HHhcCCcEEEcchHHHHHHHHHHhCCCcEEEeccccc
Confidence            678999999999999999999999999999999997543    3445678899999864 34445567899999999943


Q ss_pred             C-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHH-------
Q 024290          160 P-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQ-------  215 (269)
Q Consensus       160 ~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~-------  215 (269)
                      .           ++..+++|+.++..+.+++    ++.+.+++|+++|....  ......|+.+|.+++.+.+       
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela  157 (234)
T d1o5ia_          78 KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVA  157 (234)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHhc
Confidence            2           2344567877766655544    55666799999987643  3344568999999997764       


Q ss_pred             hcCCCEEEEEcCcccccCc
Q 024290          216 DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       216 ~~gi~~~ilrp~~i~g~~~  234 (269)
                      ..||+++.|.||++.+++.
T Consensus       158 ~~gIrVN~I~PG~v~T~~~  176 (234)
T d1o5ia_         158 PYGITVNCVAPGWTETERV  176 (234)
T ss_dssp             GGTEEEEEEEECSBCCTTH
T ss_pred             ccCeEEeecccCccchhhh
Confidence            3799999999999987653

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.82  E-value=2e-20  Score=158.35  Aligned_cols=157  Identities=13%  Similarity=0.086  Sum_probs=119.9

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc------CCCEEEEcCCCCCCcHHHHh------
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD------WGATVVNADLSKPETIPATL------  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~------~~~~~i~~Dl~d~~~l~~~~------  146 (269)
                      +++++|++|||||+++||+++++.|+++|++|++++|+.++..+..++      .++..+++|++|++++++++      
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   84 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999987765443221      25788999999999988776      


Q ss_pred             -cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHc-CCCeEEEecccCCCC---------CCC
Q 024290          147 -VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAM-GIQKYVFYSIHNCDK---------HPE  200 (269)
Q Consensus       147 -~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~-~v~r~V~~SS~~~~~---------~~~  200 (269)
                       .++|++|||||...           ++..+++|+.++..+.+++    .+. +.+.++..++.....         ...
T Consensus        85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~  164 (260)
T d1h5qa_          85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQ  164 (260)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSC
T ss_pred             hCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccc
Confidence             36899999999532           3345678888877766654    223 444677766654311         234


Q ss_pred             CcHHHHHHHHHHHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          201 VPLMEIKYCTEQFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       201 ~~y~~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      ..|+.+|.+++.+.+       ..||+++.|.||.+.++...
T Consensus       165 ~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~  206 (260)
T d1h5qa_         165 VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA  206 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG
T ss_pred             cchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchh
Confidence            569999999998764       37899999999999877544

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.82  E-value=1.1e-20  Score=158.21  Aligned_cols=152  Identities=11%  Similarity=0.061  Sum_probs=117.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCe-------EEEEeCCCCCCccc---cccC--CCEEEEcCCCCCCcHHHHh-----
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYD-------VRCLVRPRPAPADF---LRDW--GATVVNADLSKPETIPATL-----  146 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~-------V~~~~R~~~~~~~~---~~~~--~~~~i~~Dl~d~~~l~~~~-----  146 (269)
                      +.||||||+++||+++++.|+++|++       |++.+|+.++..+.   ++..  .+.++.+|++|++++++++     
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35899999999999999999999987       88889976544332   2222  3677899999999888776     


Q ss_pred             --cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHH
Q 024290          147 --VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIK  207 (269)
Q Consensus       147 --~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK  207 (269)
                        .++|++|||||...           ++..+++|+.++..+.+++    ++.+-+++|++||...  +.....+|+.+|
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  161 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSK  161 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHH
Confidence              46899999999432           3445678888877765555    5566679999998765  333456799999


Q ss_pred             HHHHHHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          208 YCTEQFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       208 ~~~e~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+++.+.+       ..|++++.|.||++.+++..
T Consensus       162 ~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~  196 (240)
T d2bd0a1         162 FGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG  196 (240)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC
T ss_pred             HHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhh
Confidence            99987764       37899999999999887643

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.82  E-value=9.6e-21  Score=160.73  Aligned_cols=155  Identities=14%  Similarity=0.087  Sum_probs=116.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc--------cCCCEEEEcCCCCCCcHHHHh-----
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR--------DWGATVVNADLSKPETIPATL-----  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--------~~~~~~i~~Dl~d~~~l~~~~-----  146 (269)
                      .+++|+++||||+++||++++++|+++|++|++.+|+.++..+..+        ..++.++++|++|++++++++     
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998655433221        124788999999999888876     


Q ss_pred             --cCccEEEEcCCCC---------------CCccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCC--CCCC-CCc
Q 024290          147 --VGVHTVIDCATGR---------------PEEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNC--DKHP-EVP  202 (269)
Q Consensus       147 --~~~d~vi~~ag~~---------------~~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~--~~~~-~~~  202 (269)
                        .++|++|||||..               .|+..+++|+.++..+.+++.    +.+ +.+|+++|...  ...+ ...
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~  160 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPY  160 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchh
Confidence              4799999999842               123456788888877766653    333 46666655432  2333 356


Q ss_pred             HHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          203 LMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       203 y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      |+.+|.+++.+.+.       .||+++.|.||.+.+++..
T Consensus       161 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~  200 (264)
T d1spxa_         161 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGS  200 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--
T ss_pred             hhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchh
Confidence            99999999987653       7999999999999887543

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.81  E-value=1.8e-20  Score=159.88  Aligned_cols=153  Identities=12%  Similarity=0.056  Sum_probs=118.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---ccc-----CCCEEEEcCCCCCCcHHHHh------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD-----WGATVVNADLSKPETIPATL------  146 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~-----~~~~~i~~Dl~d~~~l~~~~------  146 (269)
                      +++|+++||||+++||+++++.|+++|++|++.+|+.++..+.   +.+     ..+..+.+|++|++++++++      
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999986544322   111     24678999999999888776      


Q ss_pred             -cCccEEEEcCCCCC-------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHH
Q 024290          147 -VGVHTVIDCATGRP-------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       147 -~~~d~vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                       .++|++|||||...             ++..+++|+.++..+.+++    ++.+.++++++||...  .......|+.+
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~as  161 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACA  161 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHH
T ss_pred             cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhh
Confidence             47899999998321             2345568888877766655    4555568888887654  23334579999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      |.+++.+.+.       .||+++.|.||++.+++
T Consensus       162 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~  195 (274)
T d1xhla_         162 KAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF  195 (274)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred             hhHHHHHHHHHHHHHhHhCCceeeeccCCCcCch
Confidence            9999987653       79999999999998764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.81  E-value=4e-21  Score=162.17  Aligned_cols=153  Identities=13%  Similarity=0.044  Sum_probs=119.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      .+++|+++||||+++||+++++.|+++|++|++.+|+.++..+..++  ....++++|++|++++++++       .++|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD   82 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            47899999999999999999999999999999999986554443332  24678899999998887776       4689


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~  213 (269)
                      ++|||||...           ++..+++|+.++..+.+++.    +.+ ++||++||....  .....+|+.+|.+++.+
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  161 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSAL  161 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCccccccccchhHHHHHH
Confidence            9999999422           34566788888777666653    333 699999998653  33445799999999877


Q ss_pred             HHh---------cCCCEEEEEcCcccccC
Q 024290          214 LQD---------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       214 ~~~---------~gi~~~ilrp~~i~g~~  233 (269)
                      .+.         ++|+++.|.||++.+++
T Consensus       162 t~~lA~e~~~~g~~IrVN~I~PG~i~T~~  190 (253)
T d1hxha_         162 TRAAALSCRKQGYAIRVNSIHPDGIYTPM  190 (253)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred             HHHHHHHHhhcCCCEEEEEEeECCCcCHh
Confidence            542         45999999999998764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.81  E-value=2.4e-20  Score=159.29  Aligned_cols=154  Identities=14%  Similarity=0.113  Sum_probs=119.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC--CCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~--~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      .+++|+++||||+++||+++++.|+++|++|++++|+.++..+..++.  .+..+.+|+++.+++++++       .++|
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id   81 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKID   81 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcc
Confidence            478999999999999999999999999999999999876554433332  4788999999999888775       4789


Q ss_pred             EEEEcCCCCC----------------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHH
Q 024290          151 TVIDCATGRP----------------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKY  208 (269)
Q Consensus       151 ~vi~~ag~~~----------------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~  208 (269)
                      ++|||||...                ++..+++|+.++..+.+++    ++.+ +++|+++|...  +......|+.+|.
T Consensus        82 ilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y~asKa  160 (276)
T d1bdba_          82 TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKH  160 (276)
T ss_dssp             EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHHHHHHH
T ss_pred             cccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchHHHHHH
Confidence            9999998421                2345678888877766655    4444 68888887653  2333456999999


Q ss_pred             HHHHHHHh------cCCCEEEEEcCcccccCc
Q 024290          209 CTEQFLQD------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       209 ~~e~~~~~------~gi~~~ilrp~~i~g~~~  234 (269)
                      +++.+.+.      .+|+++.|.||.+.+++.
T Consensus       161 al~~ltr~lA~ela~~IrVN~I~PG~i~T~~~  192 (276)
T d1bdba_         161 AIVGLVRELAFELAPYVRVNGVGSGGINSDLR  192 (276)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEECCCCSCCC
T ss_pred             HHHHHHHHHHHHhhcceEEcccCCCCEecCcC
Confidence            99987653      359999999999987653

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.81  E-value=2.7e-20  Score=157.04  Aligned_cols=154  Identities=13%  Similarity=0.028  Sum_probs=120.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc------ccCCCEEEEcCCCC-CCcHHHHh------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL------RDWGATVVNADLSK-PETIPATL------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~------~~~~~~~i~~Dl~d-~~~l~~~~------  146 (269)
                      ++++|+||||||+++||.+++++|+++|++|+++.|+.++.....      ...++.++.+|+++ .+++++++      
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999998766543221      12357889999984 44566554      


Q ss_pred             -cCccEEEEcCCCC---CCccchhhcHHHHHHHHHHHHH----c---CCCeEEEecccCCC--CCCCCcHHHHHHHHHHH
Q 024290          147 -VGVHTVIDCATGR---PEEPIKKVDWEGKVALIQCAKA----M---GIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       147 -~~~d~vi~~ag~~---~~~~~~~~n~~~~~~li~a~~~----~---~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~  213 (269)
                       .++|++|||||..   .++..+++|+.++.++.+++.+    .   ..++||++||....  ......|+.+|+++..+
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~  161 (254)
T d1sbya1          82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSF  161 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHH
Confidence             4799999999953   4566778999998887776643    2   23589999988653  33345799999999877


Q ss_pred             HH-------hcCCCEEEEEcCcccccC
Q 024290          214 LQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       214 ~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      .+       ..|++++.|.||++.+++
T Consensus       162 t~~la~el~~~gIrVn~I~PG~v~T~~  188 (254)
T d1sbya1         162 TNSLAKLAPITGVTAYSINPGITRTPL  188 (254)
T ss_dssp             HHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred             HHHHHhhccccCeEEEEEEeCCCcCcc
Confidence            64       379999999999998874

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.81  E-value=1.4e-20  Score=158.00  Aligned_cols=151  Identities=13%  Similarity=0.066  Sum_probs=116.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC-cc---cccc--CCCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP-AD---FLRD--WGATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~-~~---~~~~--~~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      +.||||||+++||+++++.|+++|++|++.+++.++. .+   .++.  .++.++++|++|++++++++       .++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999999999876644322 21   1121  24678899999999988776       4789


Q ss_pred             EEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHH
Q 024290          151 TVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQF  213 (269)
Q Consensus       151 ~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~  213 (269)
                      ++|||||...           ++..+++|+.++..+.+++    ++.+-++||++||...  +......|+.+|.+++.+
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~l  161 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGF  161 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHC
Confidence            9999999432           3456678888877766554    5556679999999764  344567899999999987


Q ss_pred             HH-------hcCCCEEEEEcCcccccCc
Q 024290          214 LQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       214 ~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      .+       ..||+++.|.||++.+++.
T Consensus       162 tk~lA~el~~~gIrvN~I~PG~i~T~~~  189 (244)
T d1edoa_         162 SKTAAREGASRNINVNVVCPGFIASDMT  189 (244)
T ss_dssp             HHHHHHHHHTTTEEEEEEEECSBCSHHH
T ss_pred             hHHHHHHHhhhCcEEEEEecceeccHHH
Confidence            64       3799999999999987653

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=4.7e-20  Score=154.77  Aligned_cols=153  Identities=10%  Similarity=-0.013  Sum_probs=122.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh---cCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL---VGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~---~~~d~vi~~ag  157 (269)
                      +++|++|||||+++||+++++.|+++|++|++.+|++++..+..+..++....+|+.+.+.++...   .++|++|||+|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag   83 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence            789999999999999999999999999999999998777776666678889999998776665554   57999999999


Q ss_pred             CCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCCC---CCCCCcHHHHHHHHHHHHHh---
Q 024290          158 GRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNCD---KHPEVPLMEIKYCTEQFLQD---  216 (269)
Q Consensus       158 ~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~~---~~~~~~y~~sK~~~e~~~~~---  216 (269)
                      ...           ++..+++|+.++..+.+++    .+.+.+++|++||....   ......|+.+|.+++.+++.   
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~  163 (245)
T d2ag5a1          84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAA  163 (245)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHH
Confidence            533           2344567877877766655    45566799999986542   23345799999999988753   


Q ss_pred             ----cCCCEEEEEcCcccccC
Q 024290          217 ----SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       217 ----~gi~~~ilrp~~i~g~~  233 (269)
                          .||+++.|.||.+.+++
T Consensus       164 e~~~~gIrvN~I~PG~i~T~~  184 (245)
T d2ag5a1         164 DFIQQGIRCNCVCPGTVDTPS  184 (245)
T ss_dssp             HHGGGTEEEEEEEESCEECHH
T ss_pred             HhhhhCcEEEEEeeceeechh
Confidence                79999999999997764

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.81  E-value=2.4e-20  Score=158.91  Aligned_cols=152  Identities=13%  Similarity=0.077  Sum_probs=115.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---ccc-----CCCEEEEcCCCCCCcHHHHh------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRD-----WGATVVNADLSKPETIPATL------  146 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~-----~~~~~i~~Dl~d~~~l~~~~------  146 (269)
                      +++|+++||||+++||+++++.|+++|++|++.+|+.++..+.   +.+     ..+..+++|++|++++++++      
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999999986544322   222     24678999999999888776      


Q ss_pred             -cCccEEEEcCCCCC---------------CccchhhcHHHHHHHHHHHH----HcCCCeEEEecc-cCC--CCCCCCcH
Q 024290          147 -VGVHTVIDCATGRP---------------EEPIKKVDWEGKVALIQCAK----AMGIQKYVFYSI-HNC--DKHPEVPL  203 (269)
Q Consensus       147 -~~~d~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~----~~~v~r~V~~SS-~~~--~~~~~~~y  203 (269)
                       .++|++|||||...               ++..+++|+.++..+.+++.    +.+ +.+|+++| .+.  .......|
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~~~~Y  161 (272)
T d1xkqa_          83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYY  161 (272)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHH
T ss_pred             hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCCcchh
Confidence             47899999999421               22345688888877777653    333 45555544 432  23334569


Q ss_pred             HHHHHHHHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          204 MEIKYCTEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       204 ~~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +.+|.+++.+.+       ..||+++.|.||++.+++
T Consensus       162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  198 (272)
T d1xkqa_         162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF  198 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchh
Confidence            999999998764       379999999999998764

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.80  E-value=1.8e-19  Score=151.41  Aligned_cols=154  Identities=14%  Similarity=0.066  Sum_probs=116.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHH---CCCeEEEEeCCCCCCcccc----ccCCCEEEEcCCCCCCcHHHHh--------
Q 024290           82 RPTSILVVGATGTLGRQIVRRALD---EGYDVRCLVRPRPAPADFL----RDWGATVVNADLSKPETIPATL--------  146 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~---~G~~V~~~~R~~~~~~~~~----~~~~~~~i~~Dl~d~~~l~~~~--------  146 (269)
                      .||+||||||+++||+++++.|++   +|++|++.+|+.++..+..    ...++.++.+|++|++++++++        
T Consensus         1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           1 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   80 (248)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence            378999999999999999999974   7999999999987664421    1236889999999999887765        


Q ss_pred             -cCccEEEEcCCCCC------------CccchhhcHHHHHHHHHHH----HHc-----------CCCeEEEecccCCC--
Q 024290          147 -VGVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCA----KAM-----------GIQKYVFYSIHNCD--  196 (269)
Q Consensus       147 -~~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~----~~~-----------~v~r~V~~SS~~~~--  196 (269)
                       .++|++|||||...            ++..+++|+.++..+.+++    ++.           +.+++|+++|....  
T Consensus        81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence             35899999999421            2235568888877776665    221           34689999987532  


Q ss_pred             ---CCCCCcHHHHHHHHHHHHH-------hcCCCEEEEEcCcccccCcc
Q 024290          197 ---KHPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       197 ---~~~~~~y~~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~~~  235 (269)
                         ......|+.+|.++..+.+       ..|++++.|.||++-+++..
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~  209 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG  209 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccc
Confidence               1123369999999987753       37899999999999887643

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.80  E-value=8.2e-20  Score=157.77  Aligned_cols=155  Identities=14%  Similarity=0.050  Sum_probs=119.2

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc-----cccc----c--CCCEEEEcCCCCCCcHHHHh-
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-----DFLR----D--WGATVVNADLSKPETIPATL-  146 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~-----~~~~----~--~~~~~i~~Dl~d~~~l~~~~-  146 (269)
                      +.+++|++|||||+++||+++++.|+++|++|++.+|+.+...     +.++    +  .......+|+.|.+++++++ 
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~   82 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   82 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHH
Confidence            3478999999999999999999999999999999998754321     1011    0  13456778999988877665 


Q ss_pred             ------cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcH
Q 024290          147 ------VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPL  203 (269)
Q Consensus       147 ------~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y  203 (269)
                            .++|++|||||...           ++..+++|+.++..+.+++    ++.+-++||++||...  +......|
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y  162 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANY  162 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHH
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHH
Confidence                  47999999999432           3456678999887766664    5567779999999764  34455789


Q ss_pred             HHHHHHHHHHHH-------hcCCCEEEEEcCcccccC
Q 024290          204 MEIKYCTEQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       204 ~~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +.+|.+++.+.+       ..||+++.|.||.+....
T Consensus       163 ~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~  199 (302)
T d1gz6a_         163 SAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMT  199 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTT
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcch
Confidence            999999998764       379999999999886544

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.80  E-value=2.6e-20  Score=156.04  Aligned_cols=155  Identities=18%  Similarity=0.128  Sum_probs=120.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC--CCEEEEcCCCCCCcHHHHh-------cCccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATL-------VGVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~--~~~~i~~Dl~d~~~l~~~~-------~~~d~  151 (269)
                      +++|+++||||+++||+++++.|+++|++|++.+|+.++..+..++.  ++.++++|+++++++++++       .++|+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            68999999999999999999999999999999999876655544444  3678899999999988776       46899


Q ss_pred             EEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCCCC-CCCCcHHHHHHHHHHHHHh-
Q 024290          152 VIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNCDK-HPEVPLMEIKYCTEQFLQD-  216 (269)
Q Consensus       152 vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~~~-~~~~~y~~sK~~~e~~~~~-  216 (269)
                      +||||+...           +...+++|+.+...+.+++...  +-+.++++|+.+... .....|+.+|.++|.+.+. 
T Consensus        83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~~~Y~~sK~al~~lt~~l  162 (241)
T d2a4ka1          83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTL  162 (241)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHHHHHCSSHHHHHHHHH
T ss_pred             eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccCccccchhhHHHHHHHHHH
Confidence            999998322           3345678888888888887544  233566666654432 2234699999999988753 


Q ss_pred             ------cCCCEEEEEcCcccccCcc
Q 024290          217 ------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       217 ------~gi~~~ilrp~~i~g~~~~  235 (269)
                            .|+++++|.||.+-+++..
T Consensus       163 A~el~~~gIrvN~I~PG~v~T~~~~  187 (241)
T d2a4ka1         163 ALELARKGVRVNVLLPGLIQTPMTA  187 (241)
T ss_dssp             HHHHTTTTCEEEEEEECSBCCGGGT
T ss_pred             HHHHhHhCCEEeeeccCcCCCHHHH
Confidence                  6899999999999877543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=8.4e-20  Score=154.27  Aligned_cols=153  Identities=17%  Similarity=0.112  Sum_probs=116.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cccC----CCEEEEcCCCCCCcHHHHh-------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF---LRDW----GATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~----~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      +++|++|||||+++||+++++.|+++|++|++.+|+.++..+.   ++..    .+.++++|++|++++++++       
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            7899999999999999999999999999999999986554332   2221    3678899999999888776       


Q ss_pred             cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcC--CCeEEEecccCCCC----CCCCcHHH
Q 024290          147 VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMG--IQKYVFYSIHNCDK----HPEVPLME  205 (269)
Q Consensus       147 ~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~--v~r~V~~SS~~~~~----~~~~~y~~  205 (269)
                      .++|++|||||...           ++..+++|+.+...+.+++    ++.+  -+++|++||.....    .....|+.
T Consensus        88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~  167 (257)
T d1xg5a_          88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSA  167 (257)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHH
T ss_pred             CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHH
Confidence            47999999999532           2344567877777655554    4443  46999999976422    22245999


Q ss_pred             HHHHHHHHHH---------hcCCCEEEEEcCcccccC
Q 024290          206 IKYCTEQFLQ---------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       206 sK~~~e~~~~---------~~gi~~~ilrp~~i~g~~  233 (269)
                      +|.+++.+.+         ..+++++.|.||.+-+++
T Consensus       168 sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~  204 (257)
T d1xg5a_         168 TKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF  204 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred             HHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChh
Confidence            9999987653         268999999999887654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.79  E-value=7.7e-20  Score=154.97  Aligned_cols=136  Identities=21%  Similarity=0.251  Sum_probs=110.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCCC-
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP-  160 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~~-  160 (269)
                      |||||||||||||++|+++|.++||+|++++|+.                +|+.|.+.+.++++  ++|+|||+++... 
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~   65 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------LDITNVLAVNKFFNEKKPNVVINCAAHTAV   65 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------ccCCCHHHHHHHHHHcCCCEEEeecccccc
Confidence            5799999999999999999999999999999862                48999999999886  6799999998543 


Q ss_pred             ------CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-------------CCCCCCcHHHHHHHHHHHHHhcCCCE
Q 024290          161 ------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------------DKHPEVPLMEIKYCTEQFLQDSGLPH  221 (269)
Q Consensus       161 ------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-------------~~~~~~~y~~sK~~~e~~~~~~gi~~  221 (269)
                            .......|......+.+.++..+. .+++.|+..+             ...+...|+..|...|+++++.+.++
T Consensus        66 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~~~~~  144 (281)
T d1vl0a_          66 DKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKY  144 (281)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSE
T ss_pred             ccccccchhhcccccccccccccccccccc-cccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHhCCCc
Confidence                  233345667777778888777664 6666665432             22345569999999999999999999


Q ss_pred             EEEEcCcccccCccc
Q 024290          222 VIIRLWPYWAICSTY  236 (269)
Q Consensus       222 ~ilrp~~i~g~~~~~  236 (269)
                      +++||+++||+...+
T Consensus       145 ~i~R~~~vyG~~~~~  159 (281)
T d1vl0a_         145 YIVRTAWLYGDGNNF  159 (281)
T ss_dssp             EEEEECSEESSSSCH
T ss_pred             cccceeEEeCCCccc
Confidence            999999999997665

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.79  E-value=1.5e-19  Score=153.94  Aligned_cols=154  Identities=14%  Similarity=0.071  Sum_probs=118.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc----cccc--CCCEEEEcCCCCCCcHHHHh-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD----FLRD--WGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~----~~~~--~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      ++++|++|||||+++||+++++.|+++|++|++.+|+.++..+    .+.+  ..+.++++|++|++++.+++       
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            5899999999999999999999999999999999987543221    1222  24778899999999888776       


Q ss_pred             cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC---CCCCCCcHHHHHHHH
Q 024290          147 VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC---DKHPEVPLMEIKYCT  210 (269)
Q Consensus       147 ~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~---~~~~~~~y~~sK~~~  210 (269)
                      .++|++|||++...           ++..+++|+.++..+.+++...  .-+++++++|...   ......+|+.+|.++
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~asKaal  174 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAI  174 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHH
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHHHHHH
Confidence            47899999999432           2345668888888888887653  2247777776542   233345699999999


Q ss_pred             HHHHH-------hcCCCEEEEEcCcccccC
Q 024290          211 EQFLQ-------DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~-------~~gi~~~ilrp~~i~g~~  233 (269)
                      +.+.+       ..||+++.|.||++.+++
T Consensus       175 ~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~  204 (272)
T d1g0oa_         175 ETFARCMAIDMADKKITVNVVAPGGIKTDM  204 (272)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             HHHHHHHHHHhchhCeEEEEEccCCcCChH
Confidence            98875       379999999999998764

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.78  E-value=9.5e-20  Score=154.08  Aligned_cols=154  Identities=18%  Similarity=0.125  Sum_probs=116.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc----cccccC--CCEEEEcCCCCCCcHHHHh-------
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA----DFLRDW--GATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~----~~~~~~--~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      ++.+|++|||||+++||+++++.|+++|++|++..++.++..    +.+.+.  ++..+++|++|++++++++       
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            588999999999999999999999999999998877544321    222222  4778999999999888776       


Q ss_pred             cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHcC--CCeEEEecccCC---CCCCCCcHHHHHHHH
Q 024290          147 VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAMG--IQKYVFYSIHNC---DKHPEVPLMEIKYCT  210 (269)
Q Consensus       147 ~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~~--v~r~V~~SS~~~---~~~~~~~y~~sK~~~  210 (269)
                      .++|++|||||...           ++..+++|+.+...+++++.+.-  -+++++++|...   .......|+.+|.++
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK~al  162 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAV  162 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHHHH
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHHHHH
Confidence            47899999999533           23456688888888888776531  235666655432   233445699999999


Q ss_pred             HHHHHh-------cCCCEEEEEcCcccccC
Q 024290          211 EQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+.+.       .|++++.|.||++.+++
T Consensus       163 ~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~  192 (259)
T d1ja9a_         163 EGFCRAFAVDCGAKGVTVNCIAPGGVKTDM  192 (259)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             HHHHHHHHHHHhhcCeEEeccCcCCccChh
Confidence            987653       79999999999997653

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.78  E-value=1.5e-19  Score=152.48  Aligned_cols=156  Identities=17%  Similarity=0.131  Sum_probs=115.0

Q ss_pred             CCCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCCCCCcc---ccc-cCCCEEEEcCCCCCCcHHHHh-------
Q 024290           80 PVRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLR-DWGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        80 ~~~~~~vlVtGatG--~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~---~~~-~~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      ++++|++|||||+|  +||++++++|+++|++|++.+|++....+   ... ......+++|++|++++++++       
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence            58899999999987  89999999999999999998886432211   111 125778999999999888776       


Q ss_pred             cCccEEEEcCCCCC---------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHH
Q 024290          147 VGVHTVIDCATGRP---------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIK  207 (269)
Q Consensus       147 ~~~d~vi~~ag~~~---------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK  207 (269)
                      .++|++|||||..+               +...+++|+.+...+.+++...  .-+++|++||...  .......|+.+|
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  164 (256)
T d1ulua_          85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAK  164 (256)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHHHHHH
Confidence            46899999998422               1124567778888888776543  1258999998765  334456799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+++.+.+.       .|++++.|.||.+..+...
T Consensus       165 aal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~  199 (256)
T d1ulua_         165 AALEASVRYLAYELGPKGVRVNAISAGPVRTVAAR  199 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCC------
T ss_pred             HHHHHHHHHHHHHhcccCCEEeeeccceeeecccc
Confidence            999987653       7999999999999876543

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.78  E-value=8.2e-19  Score=150.74  Aligned_cols=160  Identities=14%  Similarity=0.119  Sum_probs=116.8

Q ss_pred             CCCCCCCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc------CCCEEEEcCCCCCCcHHHHh-
Q 024290           74 NMSPGTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD------WGATVVNADLSKPETIPATL-  146 (269)
Q Consensus        74 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~------~~~~~i~~Dl~d~~~l~~~~-  146 (269)
                      .+.|...+++|++|||||+|+||+++++.|+++|++|++++|+.++..+..++      ..+..+.+|++|.+++++++ 
T Consensus        16 ~~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~   95 (294)
T d1w6ua_          16 AMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS   95 (294)
T ss_dssp             CCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhh
Confidence            45566679999999999999999999999999999999999986554332221      24678899999999887765 


Q ss_pred             ------cCccEEEEcCCCCCCc-----------cchhhcHHHHHHHHHHH----HH-cCCCeEEEecccCC--CCCCCCc
Q 024290          147 ------VGVHTVIDCATGRPEE-----------PIKKVDWEGKVALIQCA----KA-MGIQKYVFYSIHNC--DKHPEVP  202 (269)
Q Consensus       147 ------~~~d~vi~~ag~~~~~-----------~~~~~n~~~~~~li~a~----~~-~~v~r~V~~SS~~~--~~~~~~~  202 (269)
                            .++|++|||||.....           ..+.+|......+....    .. .+...++.+++...  ......+
T Consensus        96 ~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~  175 (294)
T d1w6ua_          96 ELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVP  175 (294)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHH
T ss_pred             hhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccch
Confidence                  4789999999954322           22345555554444332    22 23446777776543  3334557


Q ss_pred             HHHHHHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          203 LMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       203 y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      |+.+|.+++.+.+.       .||++++|.||.+.++.
T Consensus       176 YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~  213 (294)
T d1w6ua_         176 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG  213 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccch
Confidence            99999999988753       78999999999998764

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.77  E-value=6.9e-20  Score=154.36  Aligned_cols=150  Identities=11%  Similarity=0.021  Sum_probs=114.2

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-------cCccEEEEcCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-------VGVHTVIDCAT  157 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-------~~~d~vi~~ag  157 (269)
                      ++|||||+++||+++++.|+++|++|++.+|+.++..+ ++.....+.++|++|.+++++++       .++|++|||||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~-~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg   80 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE-LEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   80 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH-HHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            68999999999999999999999999999997655433 22222334568999998887776       47999999998


Q ss_pred             CCC------------CccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCCCC--CCCCcHHHHHHHHHHHHH----
Q 024290          158 GRP------------EEPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNCDK--HPEVPLMEIKYCTEQFLQ----  215 (269)
Q Consensus       158 ~~~------------~~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~~~--~~~~~y~~sK~~~e~~~~----  215 (269)
                      ...            ++..+++|+.++..++++    +++.+-++||++||.....  ....+|+.+|.+++.+.+    
T Consensus        81 ~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~  160 (252)
T d1zmta1          81 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSK  160 (252)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHHHH
Confidence            421            223445787777666655    4566778999999987632  234579999999998765    


Q ss_pred             ---hcCCCEEEEEcCcccccCcc
Q 024290          216 ---DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       216 ---~~gi~~~ilrp~~i~g~~~~  235 (269)
                         ..||+++.|.||++.++...
T Consensus       161 ela~~gIrVN~I~PG~i~T~~~~  183 (252)
T d1zmta1         161 ELGEYNIPVFAIGPNYLHSEDSP  183 (252)
T ss_dssp             HHGGGTCCEEEEEESSBCCBTCC
T ss_pred             HhcccCcEEEEEecCCCcCcchh
Confidence               37999999999999876543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.76  E-value=2.1e-18  Score=144.86  Aligned_cols=154  Identities=14%  Similarity=0.069  Sum_probs=111.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhc---------
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLV---------  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~---------  147 (269)
                      |++|+||||||+++||++++++|+++|+  .|++.+|+.++..++.+.  .++.++++|++|.++++++++         
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            5679999999999999999999999995  688889987665543322  358899999999988877652         


Q ss_pred             CccEEEEcCCCCC------------CccchhhcHHHHHHHHHHHH----Hc-----------CCCeEEEecccCC-----
Q 024290          148 GVHTVIDCATGRP------------EEPIKKVDWEGKVALIQCAK----AM-----------GIQKYVFYSIHNC-----  195 (269)
Q Consensus       148 ~~d~vi~~ag~~~------------~~~~~~~n~~~~~~li~a~~----~~-----------~v~r~V~~SS~~~-----  195 (269)
                      ++|++|||||...            ++..+++|+.++..+.+++.    +.           ...+++.+++...     
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence            4899999999421            22456789898887766653    22           1246888776432     


Q ss_pred             ----CCCCCCcHHHHHHHHHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          196 ----DKHPEVPLMEIKYCTEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       196 ----~~~~~~~y~~sK~~~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                          ...+...|+.+|+++..+.+       ..|++++.|.||++-+++.
T Consensus       161 ~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~  210 (250)
T d1yo6a1         161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG  210 (250)
T ss_dssp             CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCC
Confidence                11223359999999987764       4789999999999987653

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1e-18  Score=149.71  Aligned_cols=152  Identities=14%  Similarity=0.132  Sum_probs=112.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEe---CCCCCCccc------cc--cCCCEEEEcCCCCCCcHHHHh-----
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLV---RPRPAPADF------LR--DWGATVVNADLSKPETIPATL-----  146 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~---R~~~~~~~~------~~--~~~~~~i~~Dl~d~~~l~~~~-----  146 (269)
                      .|.||||||+++||+++++.|+++|++|+.+.   |+.+...+.      +.  ...+..+.+|++|.+++.+++     
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            45678999999999999999999998765554   433222111      11  125788999999999998876     


Q ss_pred             cCccEEEEcCCCCC-----------CccchhhcHHHHHHHHHH----HHHcCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          147 VGVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQC----AKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       147 ~~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a----~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      +.+|++|||+|...           ++..+++|+.++.++.++    +++.+-++||++||...  +.....+|+.+|++
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaa  161 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA  161 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHH
Confidence            35899999998422           334567898887776665    45667789999999865  33445679999999


Q ss_pred             HHHHHH-------hcCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQ-------DSGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~-------~~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+       ..|++++.|.||++-+++.
T Consensus       162 l~~l~~~la~El~~~gIrVn~V~PG~v~T~~~  193 (285)
T d1jtva_         162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAFM  193 (285)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred             HHHHHHHHHHHhhccCcEEEEEecCCCCChHH
Confidence            998764       3799999999999987653

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=2.8e-19  Score=151.09  Aligned_cols=154  Identities=12%  Similarity=0.027  Sum_probs=120.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHH---CCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHHHHhc--
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALD---EGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIPATLV--  147 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~---~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~~~~~--  147 (269)
                      .|.+|.++||||+++||++++++|++   +|++|++++|+.++..+..+       ...+..+.+|++|+++++++++  
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            58899999999999999999999986   79999999998765443322       1246789999999998887752  


Q ss_pred             ---------CccEEEEcCCCCC--------------CccchhhcHHHHHHHHHHHHHc----C--CCeEEEecccCC--C
Q 024290          148 ---------GVHTVIDCATGRP--------------EEPIKKVDWEGKVALIQCAKAM----G--IQKYVFYSIHNC--D  196 (269)
Q Consensus       148 ---------~~d~vi~~ag~~~--------------~~~~~~~n~~~~~~li~a~~~~----~--v~r~V~~SS~~~--~  196 (269)
                               .+|++|||||...              ++..+++|+.++..+.+++...    +  .++||++||...  +
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence                     3689999998421              2345678999999988888543    2  248999999764  3


Q ss_pred             CCCCCcHHHHHHHHHHHHH-----hcCCCEEEEEcCcccccC
Q 024290          197 KHPEVPLMEIKYCTEQFLQ-----DSGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       197 ~~~~~~y~~sK~~~e~~~~-----~~gi~~~ilrp~~i~g~~  233 (269)
                      ......|+.+|.+++.+.+     ..|++++.|.||.+.+++
T Consensus       163 ~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~  204 (259)
T d1oaaa_         163 YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM  204 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHH
Confidence            3345679999999998764     379999999999998864

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.75  E-value=1.3e-18  Score=148.04  Aligned_cols=135  Identities=23%  Similarity=0.257  Sum_probs=106.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCC--
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGR--  159 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~--  159 (269)
                      |||||||||||||++|++.|.++|+.| .++++...            +.+|++|.+.+.++++  ++|+|||+||..  
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~   67 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE------------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS------------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc------------ccCcCCCHHHHHHHHHHcCCCEEEEecccccc
Confidence            679999999999999999999988644 45554321            2479999999999886  469999999842  


Q ss_pred             -----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC-------------CCCCCCcHHHHHHHHHHHHHhcCCCE
Q 024290          160 -----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC-------------DKHPEVPLMEIKYCTEQFLQDSGLPH  221 (269)
Q Consensus       160 -----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~-------------~~~~~~~y~~sK~~~e~~~~~~gi~~  221 (269)
                           .+...++.|+.++.++++++++.++ +++++||...             ...|.+.|+.+|...|++++.....+
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~~~~~  146 (298)
T d1n2sa_          68 DKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKH  146 (298)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSE
T ss_pred             cccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhhhccc
Confidence                 3344667899999999999998875 6777776532             22345679999999999999888888


Q ss_pred             EEEEcCccccc
Q 024290          222 VIIRLWPYWAI  232 (269)
Q Consensus       222 ~ilrp~~i~g~  232 (269)
                      .++|++.++..
T Consensus       147 ~~~~~~~~~~~  157 (298)
T d1n2sa_         147 LIFRTSWVYAG  157 (298)
T ss_dssp             EEEEECSEECS
T ss_pred             ccccccceeec
Confidence            88888877754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.1e-18  Score=148.53  Aligned_cols=153  Identities=14%  Similarity=0.034  Sum_probs=115.9

Q ss_pred             CCEE-EEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHh-------cC
Q 024290           83 PTSI-LVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATL-------VG  148 (269)
Q Consensus        83 ~~~v-lVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~-------~~  148 (269)
                      +|+| |||||+++||+++++.|+++ |++|++.+|+.++..+..+     ..++.++++|++|.+++++++       .+
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            4555 89999999999999999986 8999999998765443322     135889999999999887765       46


Q ss_pred             ccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--------------------
Q 024290          149 VHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--------------------  195 (269)
Q Consensus       149 ~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--------------------  195 (269)
                      +|++|||||...           ++..+++|+.++..+.+++...  .-+++|++||...                    
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~  161 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI  161 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhccccc
Confidence            899999999422           2245678999999998888543  2258999998421                    


Q ss_pred             -----------------------CCCCCCcHHHHHHHHHHHHH--------h---cCCCEEEEEcCcccccCcc
Q 024290          196 -----------------------DKHPEVPLMEIKYCTEQFLQ--------D---SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       196 -----------------------~~~~~~~y~~sK~~~e~~~~--------~---~gi~~~ilrp~~i~g~~~~  235 (269)
                                             ...+...|+.+|.++..+.+        +   .++.++.+.||++.+++..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~  235 (275)
T d1wmaa1         162 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  235 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             chhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCccc
Confidence                                   12234569999998876542        1   4899999999999887643

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.7e-18  Score=142.43  Aligned_cols=157  Identities=13%  Similarity=0.113  Sum_probs=120.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccC--CCEEEEcCCCCCCcHHHHh-------cCcc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDW--GATVVNADLSKPETIPATL-------VGVH  150 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~--~~~~i~~Dl~d~~~l~~~~-------~~~d  150 (269)
                      ++++|+++||||+++||++++++|+++|++|++++|+.++..+..++.  ......+|+.+.+.++...       ...|
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD   81 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccc
Confidence            478999999999999999999999999999999999887765544432  4677888998877665544       3578


Q ss_pred             EEEEcCCCC-----------------CCccchhhcHHHHHHHHHHHHHc----------CCCeEEEecccCC--CCCCCC
Q 024290          151 TVIDCATGR-----------------PEEPIKKVDWEGKVALIQCAKAM----------GIQKYVFYSIHNC--DKHPEV  201 (269)
Q Consensus       151 ~vi~~ag~~-----------------~~~~~~~~n~~~~~~li~a~~~~----------~v~r~V~~SS~~~--~~~~~~  201 (269)
                      .++++++..                 .++..+++|+.++.++.+++...          +.++||++||...  +.....
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~  161 (248)
T d2o23a1          82 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA  161 (248)
T ss_dssp             EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred             ccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCch
Confidence            888887621                 12345678889988888887432          3348999999865  344556


Q ss_pred             cHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCccc
Q 024290          202 PLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICSTY  236 (269)
Q Consensus       202 ~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~~  236 (269)
                      .|+.+|.+++.+.+.       .|++++.|.||.+.+++...
T Consensus       162 ~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~  203 (248)
T d2o23a1         162 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS  203 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhc
Confidence            799999999988753       78999999999998876443

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.74  E-value=6.8e-18  Score=142.27  Aligned_cols=150  Identities=19%  Similarity=0.271  Sum_probs=117.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCC---Ccccc---ccC--CCEEEEcCCCCCCcHHHHhc------
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPA---PADFL---RDW--GATVVNADLSKPETIPATLV------  147 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~---~~~~~---~~~--~~~~i~~Dl~d~~~l~~~~~------  147 (269)
                      ++++|||||+|+||+++++.|+++|+ +|++++|+..+   ..+..   +..  .+.++.+|++|.+++.++++      
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~   88 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV   88 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence            46899999999999999999999998 58888886422   22211   222  37788999999999988874      


Q ss_pred             CccEEEEcCCCCCC-----------ccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC--CCCCCCcHHHHHHHHHHHH
Q 024290          148 GVHTVIDCATGRPE-----------EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFL  214 (269)
Q Consensus       148 ~~d~vi~~ag~~~~-----------~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~  214 (269)
                      ++|.||||+|....           ...+++|+.+..++.+++...+.++||++||...  +......|+.+|..++.+.
T Consensus        89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~la  168 (259)
T d2fr1a1          89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLA  168 (259)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHHHHHHHHhHHHHH
Confidence            47999999995332           2345688899999999888888889999999753  4455667999999998775


Q ss_pred             H---hcCCCEEEEEcCccccc
Q 024290          215 Q---DSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       215 ~---~~gi~~~ilrp~~i~g~  232 (269)
                      +   ..|++++.|.||.+.+.
T Consensus       169 ~~~~~~Gi~v~~I~pg~~~~~  189 (259)
T d2fr1a1         169 QQRRSDGLPATAVAWGTWAGS  189 (259)
T ss_dssp             HHHHHTTCCCEEEEECCBC--
T ss_pred             HHHHhCCCCEEECCCCcccCC
Confidence            4   58999999999998764

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=3.7e-18  Score=142.19  Aligned_cols=148  Identities=15%  Similarity=0.057  Sum_probs=107.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh---------cCccEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL---------VGVHTV  152 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~---------~~~d~v  152 (269)
                      ++|+||||||+|+||+++++.|+++|++|++++++..+...     ....+.+|..+.++.+.+.         .++|++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l   75 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   75 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----ccceeecccCcHHHHHHHHHHHHHHhCCCCceEE
Confidence            47999999999999999999999999999999986543221     1223344554444433322         258999


Q ss_pred             EEcCCCCC------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHHh
Q 024290          153 IDCATGRP------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQD  216 (269)
Q Consensus       153 i~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~~  216 (269)
                      |||||...            ++..+++|+.++.++.+++...  +-++||++||...  +.....+|+.+|.+++.+.+.
T Consensus        76 InnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~  155 (236)
T d1dhra_          76 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQS  155 (236)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             EECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHHHHHHHHH
Confidence            99998321            2234568888888887777543  2358999999865  233345799999999988753


Q ss_pred             ---------cCCCEEEEEcCcccccCc
Q 024290          217 ---------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       217 ---------~gi~~~ilrp~~i~g~~~  234 (269)
                               .|++++.|.||++.+++.
T Consensus       156 la~El~~~~~gI~vn~v~PG~v~T~~~  182 (236)
T d1dhra_         156 LAGKNSGMPSGAAAIAVLPVTLDTPMN  182 (236)
T ss_dssp             HTSTTSSCCTTCEEEEEEESCEECHHH
T ss_pred             HHHHhccCCCcEEEEEEEeccCcCCcc
Confidence                     479999999999988753

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.3e-18  Score=146.27  Aligned_cols=152  Identities=14%  Similarity=0.107  Sum_probs=114.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc------CCCEEEEcCCCCCCcHHHHh-------c
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD------WGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~------~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      +++|++|||||+++||+++++.|+++|++|++++|+.+++.+...+      ..+..+.+|+.+.+.+...+       .
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            7899999999999999999999999999999999987655443221      23667788998877665544       4


Q ss_pred             CccEEEEcCCCCC-----------CccchhhcHHHHHHHHHHH----HHcCCCeEEEecccCC--CCCCCCcHHHHHHHH
Q 024290          148 GVHTVIDCATGRP-----------EEPIKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC--DKHPEVPLMEIKYCT  210 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----------~~~~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~--~~~~~~~y~~sK~~~  210 (269)
                      .+|++++|+|...           ++..+++|+.++..+.+++    ++. -+++|++||...  +......|+.+|+++
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKaal  170 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFAL  170 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHHH
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHHHH
Confidence            6899999998432           1234567877776655554    433 369999998764  333446899999999


Q ss_pred             HHHHHh---------cCCCEEEEEcCcccccC
Q 024290          211 EQFLQD---------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       211 e~~~~~---------~gi~~~ilrp~~i~g~~  233 (269)
                      +.+.+.         .+++++.+.||.+-+++
T Consensus       171 ~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~  202 (269)
T d1xu9a_         171 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTET  202 (269)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH
T ss_pred             HHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH
Confidence            876532         46889999999998764

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.71  E-value=1.3e-17  Score=138.77  Aligned_cols=146  Identities=15%  Similarity=0.085  Sum_probs=105.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-------h--cCccEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-------L--VGVHTVI  153 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-------~--~~~d~vi  153 (269)
                      ..|||||||+++||++++++|+++|++|++++|++++...     ....+.+|..+.+.....       +  .++|+||
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~li   76 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF   76 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc-----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEEE
Confidence            3579999999999999999999999999999998654322     122344566544433222       1  4589999


Q ss_pred             EcCCCCC------------CccchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHHHHHHHHHHh-
Q 024290          154 DCATGRP------------EEPIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIKYCTEQFLQD-  216 (269)
Q Consensus       154 ~~ag~~~------------~~~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK~~~e~~~~~-  216 (269)
                      ||||...            ++..+++|+.++..+.+++...  +-++||++||...  +.....+|+.+|.+++.+.+. 
T Consensus        77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~l  156 (235)
T d1ooea_          77 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSL  156 (235)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             ECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHHHHHHHHHH
Confidence            9999421            2234568888888877777553  2258999998764  333446799999999988753 


Q ss_pred             --------cCCCEEEEEcCcccccC
Q 024290          217 --------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       217 --------~gi~~~ilrp~~i~g~~  233 (269)
                              .+++++.+.||.+..++
T Consensus       157 a~e~~~~~~~i~v~~i~Pg~~~T~~  181 (235)
T d1ooea_         157 AAKDSGLPDNSAVLTIMPVTLDTPM  181 (235)
T ss_dssp             HSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred             HHHhccCCCceEEEEEecCcCcCcc
Confidence                    46788999999998764

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=9.7e-17  Score=136.69  Aligned_cols=146  Identities=16%  Similarity=0.170  Sum_probs=100.0

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCC-ccccccCCCEEEEcCCCCCCcH-HHH-----hcCccEEEEcCC
Q 024290           86 ILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAP-ADFLRDWGATVVNADLSKPETI-PAT-----LVGVHTVIDCAT  157 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~-~~~~~~~~~~~i~~Dl~d~~~l-~~~-----~~~~d~vi~~ag  157 (269)
                      ||||||+||||++|+++|+++|+ +|+++++-.... ...+.+..+    +|..+.+.+ ...     +..+++|+|+|+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNI----ADYMDKEDFLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCC----SEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccch----hhhccchHHHHHHhhhhcccchhhhhhhcc
Confidence            89999999999999999999995 788886432211 111111111    111111121 111     246799999987


Q ss_pred             CC-----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC------------CCCCCCcHHHHHHHHHHHHH----h
Q 024290          158 GR-----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC------------DKHPEVPLMEIKYCTEQFLQ----D  216 (269)
Q Consensus       158 ~~-----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~------------~~~~~~~y~~sK~~~e~~~~----~  216 (269)
                      ..     +.....+.|+.++.+++++++..+++.+++.|+...            ...+.+.|+.+|...|.+++    +
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~  157 (307)
T d1eq2a_          78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE  157 (307)
T ss_dssp             CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccc
Confidence            32     233455678899999999999999865444444321            12455779999999998875    4


Q ss_pred             cCCCEEEEEcCcccccCcc
Q 024290          217 SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       217 ~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+++++++||+++||+...
T Consensus       158 ~~~~~~~~r~~~vyGp~~~  176 (307)
T d1eq2a_         158 ANSQIVGFRYFNVYGPREG  176 (307)
T ss_dssp             CSSCEEEEEECEEESSSCG
T ss_pred             cccccccccceeEeecccc
Confidence            7899999999999998654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=3.6e-16  Score=131.36  Aligned_cols=155  Identities=13%  Similarity=0.101  Sum_probs=111.0

Q ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCCCCCccc---cc-cCCCEEEEcCCCCCCcHHHHh-------c
Q 024290           81 VRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAPADF---LR-DWGATVVNADLSKPETIPATL-------V  147 (269)
Q Consensus        81 ~~~~~vlVtGatG--~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~-~~~~~~i~~Dl~d~~~l~~~~-------~  147 (269)
                      +++|++|||||+|  +||+++++.|+++|++|++.+|+++.....   .. ......+..|+.+.+++.+.+       .
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            7899999999998  899999999999999999999975432211   11 124677888998887766655       3


Q ss_pred             CccEEEEcCCCCCCc----------------cchhhcHHHHHHHHHHHHHc--CCCeEEEecccCC--CCCCCCcHHHHH
Q 024290          148 GVHTVIDCATGRPEE----------------PIKKVDWEGKVALIQCAKAM--GIQKYVFYSIHNC--DKHPEVPLMEIK  207 (269)
Q Consensus       148 ~~d~vi~~ag~~~~~----------------~~~~~n~~~~~~li~a~~~~--~v~r~V~~SS~~~--~~~~~~~y~~sK  207 (269)
                      .+|++|||++.....                ...++|+.+...+.+++...  +-+.+|++||...  +.+....|+.+|
T Consensus        83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~sK  162 (258)
T d1qsga_          83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAK  162 (258)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHHHH
Confidence            579999999843211                11223444555555555432  2236888888754  233446799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+++.+.+.       .||+++.|+||.+.+++..
T Consensus       163 aal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~  197 (258)
T d1qsga_         163 ASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS  197 (258)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGG
T ss_pred             HHHHHHHHHHHHHhCccCceeeccccccccccccc
Confidence            999988754       7899999999999887644

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.63  E-value=1.1e-15  Score=126.85  Aligned_cols=145  Identities=17%  Similarity=0.110  Sum_probs=107.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh------cCccEEEEcC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL------VGVHTVIDCA  156 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~------~~~d~vi~~a  156 (269)
                      .|++|||||+++||+++++.|+++|++|++++|+++..       +...+++|+.+......+.      ...+.+++++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~-------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAA   73 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS-------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc-------cceEeeccccchhhhHHHHHhhhccccccchhhhh
Confidence            37899999999999999999999999999999976532       3567789998876665554      2345566665


Q ss_pred             CCC---------------CCccchhhcHHHHHHHHHHHHH----------cCCCeEEEecccCC--CCCCCCcHHHHHHH
Q 024290          157 TGR---------------PEEPIKKVDWEGKVALIQCAKA----------MGIQKYVFYSIHNC--DKHPEVPLMEIKYC  209 (269)
Q Consensus       157 g~~---------------~~~~~~~~n~~~~~~li~a~~~----------~~v~r~V~~SS~~~--~~~~~~~y~~sK~~  209 (269)
                      +..               .++..+++|+.+...+.+.+..          .+.++||++||...  +.....+|+.+|.+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  153 (241)
T d1uaya_          74 GVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGG  153 (241)
T ss_dssp             CCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             hccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHH
Confidence            521               1223456777777666665532          23458999999764  34456789999999


Q ss_pred             HHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          210 TEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       210 ~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      ++.+.+.       .||+++.|.||.+.++..
T Consensus       154 l~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~  185 (241)
T d1uaya_         154 VVALTLPAARELAGWGIRVVTVAPGLFDTPLL  185 (241)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSCSSHHH
T ss_pred             HHHHHHHHHHHHhhcCCceeeecCCccccccc
Confidence            9987753       789999999999987643

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.59  E-value=2.1e-15  Score=128.15  Aligned_cols=147  Identities=14%  Similarity=-0.019  Sum_probs=100.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc----cc---cCC-----------------CEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF----LR---DWG-----------------ATVVNADLSK  138 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~~---~~~-----------------~~~i~~Dl~d  138 (269)
                      +..++||||+++||+++++.|+++|++|++.+|+.++..+.    +.   ...                 +....+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            34689999999999999999999999999988864322111    10   011                 2234556777


Q ss_pred             CCcHHHHh-------cCccEEEEcCCCCCCc-------------------------cchhhcHHHHHHHHHHHHH-----
Q 024290          139 PETIPATL-------VGVHTVIDCATGRPEE-------------------------PIKKVDWEGKVALIQCAKA-----  181 (269)
Q Consensus       139 ~~~l~~~~-------~~~d~vi~~ag~~~~~-------------------------~~~~~n~~~~~~li~a~~~-----  181 (269)
                      .+++++++       .++|++|||||.....                         .++.+|+.+...+.+++.+     
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            77777665       5799999999943211                         1345666777776666532     


Q ss_pred             -----cCCCeEEEecccCCC--CCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcc
Q 024290          182 -----MGIQKYVFYSIHNCD--KHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPY  229 (269)
Q Consensus       182 -----~~v~r~V~~SS~~~~--~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i  229 (269)
                           .+..++|++++....  ......|+.+|.+++.+.+.       .||+++.|.||++
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t  223 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS  223 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccc
Confidence                 123478888877643  33446799999999987653       7999999999974

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.59  E-value=3.5e-15  Score=126.25  Aligned_cols=154  Identities=13%  Similarity=0.101  Sum_probs=104.8

Q ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-----cCCCEEEEcCCCCCCcHHHHh-------
Q 024290           81 VRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-----DWGATVVNADLSKPETIPATL-------  146 (269)
Q Consensus        81 ~~~~~vlVtGatG--~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~~~~~i~~Dl~d~~~l~~~~-------  146 (269)
                      +++|++|||||+|  +||+++++.|+++|++|++++|+++ ..+..+     .....+..+|+++.+++.+++       
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            7899999999887  8999999999999999999999743 222221     125678899999988877765       


Q ss_pred             cCccEEEEcCCCCCCc----cchhh-------cH----HHHHHHHHHHHHc-CCC-eEEEecccCC--CCCCCCcHHHHH
Q 024290          147 VGVHTVIDCATGRPEE----PIKKV-------DW----EGKVALIQCAKAM-GIQ-KYVFYSIHNC--DKHPEVPLMEIK  207 (269)
Q Consensus       147 ~~~d~vi~~ag~~~~~----~~~~~-------n~----~~~~~li~a~~~~-~v~-r~V~~SS~~~--~~~~~~~y~~sK  207 (269)
                      ..+|++|||+|.....    ...+.       +.    .....+...+.+. +.. .++.+|+.+.  .......|+.+|
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~asK  161 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAK  161 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHHH
Confidence            4789999999943211    11111       11    1122222222222 222 3555555543  333446799999


Q ss_pred             HHHHHHHHh-------cCCCEEEEEcCcccccCcc
Q 024290          208 YCTEQFLQD-------SGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       208 ~~~e~~~~~-------~gi~~~ilrp~~i~g~~~~  235 (269)
                      .+++.+.+.       .|+++++|.||.+..+...
T Consensus       162 ~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~  196 (274)
T d2pd4a1         162 AALESAVRYLAVDLGKHHIRVNALSAGPIRTLASS  196 (274)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG
T ss_pred             HHHHHHHHhhHHHhcCcCceecccccCcccCcccc
Confidence            999987653       7899999999999876543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.56  E-value=4.3e-15  Score=125.15  Aligned_cols=153  Identities=13%  Similarity=0.061  Sum_probs=102.2

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc---CCCEEEEcCCCCCCcHHHHh---------
Q 024290           81 VRPTSILVVGAT--GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD---WGATVVNADLSKPETIPATL---------  146 (269)
Q Consensus        81 ~~~~~vlVtGat--G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~---~~~~~i~~Dl~d~~~l~~~~---------  146 (269)
                      |++|++|||||+  .+||+++++.|+++|++|++.+|+.++..+.+.+   .....+++|+.+++++..++         
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            789999999965  4799999999999999999999986554332222   24778899999987665553         


Q ss_pred             -cCccEEEEcCCCCC-----Cccchhhc-----------HHHHHHHHHHHHHcC-CCeEEEecccCC--CCCCCCcHHHH
Q 024290          147 -VGVHTVIDCATGRP-----EEPIKKVD-----------WEGKVALIQCAKAMG-IQKYVFYSIHNC--DKHPEVPLMEI  206 (269)
Q Consensus       147 -~~~d~vi~~ag~~~-----~~~~~~~n-----------~~~~~~li~a~~~~~-v~r~V~~SS~~~--~~~~~~~y~~s  206 (269)
                       ..+|+++||+|..+     ..++.+..           ........++..... ...++++++...  ..+....|+.+
T Consensus        84 ~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~~~y~~s  163 (268)
T d2h7ma1          84 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVA  163 (268)
T ss_dssp             TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHHHHHH
T ss_pred             CCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcccchhhcc
Confidence             34799999999532     12222222           222233333332221 123444433322  33334579999


Q ss_pred             HHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          207 KYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       207 K~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                      |.+++.+.+.       .|++++.|.||.+.++.
T Consensus       164 K~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~  197 (268)
T d2h7ma1         164 KSALESVNRFVAREAGKYGVRSNLVAAGPIRTLA  197 (268)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHH
T ss_pred             ccchhhccccchhhhhccCCcceEEecCCCCChh
Confidence            9999987753       78999999999997653

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.51  E-value=7.4e-14  Score=117.15  Aligned_cols=149  Identities=13%  Similarity=0.042  Sum_probs=96.6

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-------cCCCEEEEcCCCCCCcHH----H-------Hh
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-------DWGATVVNADLSKPETIP----A-------TL  146 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-------~~~~~~i~~Dl~d~~~l~----~-------~~  146 (269)
                      ++|||||+++||+++++.|+++|++|++++|+.++..+.+.       ......++.|+.+..+.+    +       .+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999998654322111       124566677776554332    2       23


Q ss_pred             cCccEEEEcCCCCCCcc----------------------chhhcHHHHHHHHHHHHHc---------CCCeEEEecccCC
Q 024290          147 VGVHTVIDCATGRPEEP----------------------IKKVDWEGKVALIQCAKAM---------GIQKYVFYSIHNC  195 (269)
Q Consensus       147 ~~~d~vi~~ag~~~~~~----------------------~~~~n~~~~~~li~a~~~~---------~v~r~V~~SS~~~  195 (269)
                      .++|++|||||......                      +...|..............         ....++.+++...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            57999999999432211                      1112222222222222221         1225666666543


Q ss_pred             --CCCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccC
Q 024290          196 --DKHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAIC  233 (269)
Q Consensus       196 --~~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~  233 (269)
                        ......+|+.+|.+++.+.+.       .||+++.|.||++..+.
T Consensus       163 ~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~  209 (266)
T d1mxha_         163 DLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPP  209 (266)
T ss_dssp             GSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCS
T ss_pred             cccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccc
Confidence              333456799999999987653       79999999999987653

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.50  E-value=5e-14  Score=117.71  Aligned_cols=140  Identities=16%  Similarity=0.123  Sum_probs=91.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh--------cCccEEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL--------VGVHTVID  154 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~--------~~~d~vi~  154 (269)
                      ||.|+||||+++||+++++.|+++|++|++++|+.++.            ..|+.+.+......        +.+|++++
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~------------~~d~~~~~~~~~~~~~~~~~~~~~id~lv~   68 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV------------IADLSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE------------ECCTTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH------------HHHhcCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            68899999999999999999999999999999975432            34666654444332        35899999


Q ss_pred             cCCCCCCcc----chhhcHHHHHHHHHHH----HHcCCCeEEEecccCC---------------------------C---
Q 024290          155 CATGRPEEP----IKKVDWEGKVALIQCA----KAMGIQKYVFYSIHNC---------------------------D---  196 (269)
Q Consensus       155 ~ag~~~~~~----~~~~n~~~~~~li~a~----~~~~v~r~V~~SS~~~---------------------------~---  196 (269)
                      |||......    ...+|..+...+.+..    .+........+++...                           .   
T Consensus        69 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~  148 (257)
T d1fjha_          69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE  148 (257)
T ss_dssp             CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCC
Confidence            998654333    3345555555444433    3334444555443210                           0   


Q ss_pred             CCCCCcHHHHHHHHHHHHHh-------cCCCEEEEEcCcccccCc
Q 024290          197 KHPEVPLMEIKYCTEQFLQD-------SGLPHVIIRLWPYWAICS  234 (269)
Q Consensus       197 ~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~i~g~~~  234 (269)
                      .....+|+.+|.+++.+.+.       .||+++.|.||++.+++.
T Consensus       149 ~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~  193 (257)
T d1fjha_         149 QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLL  193 (257)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------
T ss_pred             CcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhH
Confidence            01123599999999987653       799999999999987754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.50  E-value=9.8e-14  Score=118.40  Aligned_cols=157  Identities=11%  Similarity=0.023  Sum_probs=102.6

Q ss_pred             CCCCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCCCC-------------Ccccccc---CCC-EEEEcC----
Q 024290           79 TPVRPTSILVVGATG--TLGRQIVRRALDEGYDVRCLVRPRPA-------------PADFLRD---WGA-TVVNAD----  135 (269)
Q Consensus        79 ~~~~~~~vlVtGatG--~iG~~l~~~Ll~~G~~V~~~~R~~~~-------------~~~~~~~---~~~-~~i~~D----  135 (269)
                      .+|++|++|||||+|  +||+++++.|+++|++|++.+|++..             .......   .+. ....+|    
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            468999999999887  99999999999999999999885310             0000000   011 122222    


Q ss_pred             ----------------CCCCCcHHHH-------hcCccEEEEcCCCCC-------------CccchhhcHHHHHHHHHHH
Q 024290          136 ----------------LSKPETIPAT-------LVGVHTVIDCATGRP-------------EEPIKKVDWEGKVALIQCA  179 (269)
Q Consensus       136 ----------------l~d~~~l~~~-------~~~~d~vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~  179 (269)
                                      ..+.+.++++       +.++|++|||||...             +...+++|+.+...+.+++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                            1233333333       357999999998422             1234557788888888877


Q ss_pred             HHcCC--CeEEEecccC---CCCCCCCcHHHHHHHHHHHHH--------hcCCCEEEEEcCcccccCcc
Q 024290          180 KAMGI--QKYVFYSIHN---CDKHPEVPLMEIKYCTEQFLQ--------DSGLPHVIIRLWPYWAICST  235 (269)
Q Consensus       180 ~~~~v--~r~V~~SS~~---~~~~~~~~y~~sK~~~e~~~~--------~~gi~~~ilrp~~i~g~~~~  235 (269)
                      .....  +.++.+++.+   ........|..+|.+++.+.+        +.|++++.|.||++.++...
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~  232 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAK  232 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSS
T ss_pred             HHHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhh
Confidence            65422  2445554433   233455679999988876653        36899999999999887543

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.43  E-value=5.3e-13  Score=115.80  Aligned_cols=150  Identities=11%  Similarity=0.063  Sum_probs=102.3

Q ss_pred             CCEEEEEC--CCcHHHHHHHHHHHHCCCeEEEEeCCCCC-----------C-cccccc----CC-CEEEE----------
Q 024290           83 PTSILVVG--ATGTLGRQIVRRALDEGYDVRCLVRPRPA-----------P-ADFLRD----WG-ATVVN----------  133 (269)
Q Consensus        83 ~~~vlVtG--atG~iG~~l~~~Ll~~G~~V~~~~R~~~~-----------~-~~~~~~----~~-~~~i~----------  133 (269)
                      +|.+||||  ++.+||+++++.|+++|++|++..+....           . .+....    .. .....          
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            57899999  55799999999999999999998775321           0 000000    00 11222          


Q ss_pred             ----------cCCCCCCcHHHHh-------cCccEEEEcCCCCC-------------CccchhhcHHHHHHHHHHHHHc-
Q 024290          134 ----------ADLSKPETIPATL-------VGVHTVIDCATGRP-------------EEPIKKVDWEGKVALIQCAKAM-  182 (269)
Q Consensus       134 ----------~Dl~d~~~l~~~~-------~~~d~vi~~ag~~~-------------~~~~~~~n~~~~~~li~a~~~~-  182 (269)
                                +|+.+.+++++++       .++|++|||+|...             +...+++|+.+...+.+++... 
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                      3566666666654       57999999998432             1224456777777777777554 


Q ss_pred             -CCCeEEEecccCCCCC-C--CCcHHHHHHHHHHHHH--------hcCCCEEEEEcCccccc
Q 024290          183 -GIQKYVFYSIHNCDKH-P--EVPLMEIKYCTEQFLQ--------DSGLPHVIIRLWPYWAI  232 (269)
Q Consensus       183 -~v~r~V~~SS~~~~~~-~--~~~y~~sK~~~e~~~~--------~~gi~~~ilrp~~i~g~  232 (269)
                       .-++||.+||.+.... |  ...|+.+|.+++.+.+        ++||+++.|.||.+.+.
T Consensus       162 ~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~  223 (329)
T d1uh5a_         162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCT
T ss_pred             ccccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccch
Confidence             2358999988764322 2  3468999999997764        25999999999998763

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.39  E-value=8.3e-14  Score=111.78  Aligned_cols=80  Identities=18%  Similarity=0.198  Sum_probs=69.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----cCCCEEEEcCCCCCCcHHHHhcCccEEEE
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----DWGATVVNADLSKPETIPATLVGVHTVID  154 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~  154 (269)
                      .++++|+|+||||+|+||+.+++.|+++|++|++++|+.++..+..+    ...+....+|+.|.++++++++++|+|||
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin   98 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT   98 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeee
Confidence            46899999999999999999999999999999999998765433322    23567788999999999999999999999


Q ss_pred             cCCC
Q 024290          155 CATG  158 (269)
Q Consensus       155 ~ag~  158 (269)
                      |+|.
T Consensus        99 ~Ag~  102 (191)
T d1luaa1          99 AGAI  102 (191)
T ss_dssp             CCCT
T ss_pred             cCcc
Confidence            9984

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.88  E-value=2.7e-09  Score=79.67  Aligned_cols=96  Identities=20%  Similarity=0.262  Sum_probs=74.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCCCCc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPEE  162 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~~~~  162 (269)
                      |+|+|+|+ |.+|+.+++.|.++|++|++++.+++...+...+.+..++.+|.+|++.+.++ ++.+|.++.+...    
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~----   75 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGK----   75 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC----
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCc----
Confidence            68999997 99999999999999999999999876655443445789999999999999887 5788999887641    


Q ss_pred             cchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          163 PIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       163 ~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                        .+.|+    .+...++..+.+++|..
T Consensus        76 --d~~N~----~~~~~~k~~~~~~iI~~   97 (132)
T d1lssa_          76 --EEVNL----MSSLLAKSYGINKTIAR   97 (132)
T ss_dssp             --HHHHH----HHHHHHHHTTCCCEEEE
T ss_pred             --HHHHH----HHHHHHHHcCCceEEEE
Confidence              12333    23445677788877643

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.63  E-value=9e-08  Score=71.09  Aligned_cols=97  Identities=14%  Similarity=0.168  Sum_probs=71.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCCCCc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPEE  162 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~~~~  162 (269)
                      |+++|.|+ |.+|+++++.|.++|++|++++.+++...+ +.+.+..++.+|.++++.+.++ ++++|.||-+.+..   
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~-~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~---   75 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA-YASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN---   75 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHH-TTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSC---
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHH-HHHhCCcceeeecccchhhhccCCccccEEEEEcCch---
Confidence            57899985 999999999999999999999998665444 4456788899999999999887 67899988776521   


Q ss_pred             cchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          163 PIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       163 ~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                            ......+...++..+..+++--.
T Consensus        76 ------~~~~~~~~~~~~~~~~~~iiar~   98 (134)
T d2hmva1          76 ------IQASTLTTLLLKELDIPNIWVKA   98 (134)
T ss_dssp             ------HHHHHHHHHHHHHTTCSEEEEEC
T ss_pred             ------HHhHHHHHHHHHHcCCCcEEeec
Confidence                  11112233444566766766543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.35  E-value=7.1e-07  Score=67.20  Aligned_cols=106  Identities=14%  Similarity=0.124  Sum_probs=73.4

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCcc-ccccCC-CEEEEcCCCCCCcHHHHhcCccEEEEcCCC--
Q 024290           85 SILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPAD-FLRDWG-ATVVNADLSKPETIPATLVGVHTVIDCATG--  158 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~-~~~~~~-~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~--  158 (269)
                      ||.|+||+|.+|++++-.|..+|  .++++++.++.+... .+.+.. ..... ......+..+.++++|+||.++|.  
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~-~~~~~~~~~~~~~~aDivVitag~~~   80 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVK-GYLGPEQLPDCLKGCDVVVIPAGVPR   80 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEE-EEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCC-eEEcCCChHHHhCCCCEEEECCCcCC
Confidence            79999999999999999999888  478888876432111 111111 11111 122345667788999999999994  


Q ss_pred             ---CCCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          159 ---RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       159 ---~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                         ....+..+.|....+.+++.+++.+.+-+|.+-
T Consensus        81 ~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivv  116 (144)
T d1mlda1          81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII  116 (144)
T ss_dssp             CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence               223456778999999999999998766555544

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.29  E-value=6e-06  Score=62.05  Aligned_cols=105  Identities=13%  Similarity=0.151  Sum_probs=63.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC----CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG----YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G----~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      ||+|.|.||||++|+.+++.|+++.    .+++++.++.......... .-.....++.+    ...+.++|++|.+++ 
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~-~~~~~~~~~~~----~~~~~~~DivF~a~~-   74 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-GTTGTLQDAFD----LEALKALDIIVTCQG-   74 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-TCCCBCEETTC----HHHHHTCSEEEECSC-
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc-CCceeeecccc----hhhhhcCcEEEEecC-
Confidence            5799999999999999999888763    4677776654433221111 11111112222    124568999999986 


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcH
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPL  203 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y  203 (269)
                                -.....+.+.+.+.|.+-+|.-.|...-..+..||
T Consensus        75 ----------~~~s~~~~~~~~~~g~~~~VID~Ss~fR~~~dvpl  109 (146)
T d1t4ba1          75 ----------GDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAII  109 (146)
T ss_dssp             ----------HHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEE
T ss_pred             ----------chHHHHhhHHHHhcCCCeecccCCcccccCCCCcE
Confidence                      23345677777788875455544444444455555

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.22  E-value=5.5e-07  Score=69.45  Aligned_cols=74  Identities=18%  Similarity=0.244  Sum_probs=56.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEE-EcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVV-NADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i-~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .|+|+|.|| |++|+.+++.|.++|++|++++|+.++..++........+ ..+..+.......+...|.++.+..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~   76 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP   76 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeecc
Confidence            589999996 9999999999999999999999987766554444444443 3455555666777788888887664

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=98.21  E-value=1.1e-05  Score=55.69  Aligned_cols=88  Identities=15%  Similarity=0.140  Sum_probs=62.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      .+++|+|+|.|. |..|..+++.|.++|++|++.+.+...........+..+..++..     ...+.++|.||..-|..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~vi~SPGi~   75 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLN-----DEWLMAADLIVASPGIA   75 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCC-----HHHHHHCSEEEECTTSC
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccc-----hhhhccCCEEEECCCCC
Confidence            478899999996 889999999999999999999986543322122234555544431     23456789999988864


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCC
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGI  184 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v  184 (269)
                      ...           .+++.+++.|+
T Consensus        76 ~~~-----------~~~~~a~~~gi   89 (93)
T d2jfga1          76 LAH-----------PSLSAAADAGI   89 (93)
T ss_dssp             TTS-----------HHHHHHHHTTC
T ss_pred             CCC-----------HHHHHHHHcCC
Confidence            433           37777888876

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.13  E-value=3.2e-06  Score=63.60  Aligned_cols=102  Identities=8%  Similarity=0.080  Sum_probs=69.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCcc-------c-cccCCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPAD-------F-LRDWGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~-------~-~~~~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      .+||.|+|+ |++|..++..|+.+|  .+|++++++++....       . ..........+|+       +.+.++|+|
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~adiv   76 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDADLV   76 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhccccEE
Confidence            569999995 999999999999988  589999987542210       0 0111244445553       235689999


Q ss_pred             EEcCCCC-----CCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          153 IDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       153 i~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      |.++|..     ...+....|..-.+.+++.+.+.+.+-++.+-|
T Consensus        77 vitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          77 VITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            9999842     234556678888888999999887766655543

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.06  E-value=1.2e-05  Score=60.37  Aligned_cols=103  Identities=13%  Similarity=0.048  Sum_probs=68.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCC--c---ccccc------CCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAP--A---DFLRD------WGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~--~---~~~~~------~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      |||.|+||+|.+|+.++-.|+.+|  .++.++++++...  .   ..+.+      ...+....--.|    .+.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d----~~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN----LRIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC----GGGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch----HHHhccce
Confidence            589999999999999999999998  5999999864211  1   01111      122222111111    24567899


Q ss_pred             EEEEcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          151 TVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       151 ~vi~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                      +||.+||...     ..+....|..-.+.+++...+.+.+.++.+
T Consensus        77 vVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             EEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            9999999422     234566788888888988888875555443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.04  E-value=1.5e-05  Score=59.79  Aligned_cols=106  Identities=15%  Similarity=0.094  Sum_probs=68.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHH-CC--CeEEEEeCCCCCCcc---ccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALD-EG--YDVRCLVRPRPAPAD---FLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~-~G--~~V~~~~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |||.|+|++|.+|++++-.|.. .+  .++.+++..+ ....   .+.+........-+...++ .+.+++.|+||.++|
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~-~~~~~~aDvvvitaG   78 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDA-TPALEGADVVLISAG   78 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCC-HHHHTTCSEEEECCS
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCC-ccccCCCCEEEECCC
Confidence            6899999999999999988754 34  7899998753 2211   1111111111111222233 346789999999999


Q ss_pred             CC-----CCccchhhcHHHHHHHHHHHHHcCCCeE-EEec
Q 024290          158 GR-----PEEPIKKVDWEGKVALIQCAKAMGIQKY-VFYS  191 (269)
Q Consensus       158 ~~-----~~~~~~~~n~~~~~~li~a~~~~~v~r~-V~~S  191 (269)
                      ..     ...+....|..-.+.+.+.+.+.+.+.+ |.+|
T Consensus        79 ~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          79 VRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             CCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             ccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            42     2345677888888999999988876544 4444

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.02  E-value=3.2e-06  Score=65.68  Aligned_cols=101  Identities=21%  Similarity=0.225  Sum_probs=64.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCC-CcHHHHh--cCccEEEEcCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP-ETIPATL--VGVHTVIDCATG  158 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~-~~l~~~~--~~~d~vi~~ag~  158 (269)
                      .+.+|||+||+|++|...++.+...|.+|++.++++++. +..++.++..+. |..+. ++..+..  +++|+||++.|.
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~-~~~~~lGa~~vi-~~~~~~~~~~~~~~~~gvD~vid~vgg  108 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH-DYLRVLGAKEVL-AREDVMAERIRPLDKQRWAAAVDPVGG  108 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH-HHHHHTTCSEEE-ECC---------CCSCCEEEEEECSTT
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHH-HHHHhcccceee-ecchhHHHHHHHhhccCcCEEEEcCCc
Confidence            357899999999999999999999999999999986654 334455555432 43322 2222222  469999999984


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCC
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDK  197 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~  197 (269)
                      ..+.           ..++.++..  +|+|.++......
T Consensus       109 ~~~~-----------~~l~~l~~~--Griv~~G~~~g~~  134 (176)
T d1xa0a2         109 RTLA-----------TVLSRMRYG--GAVAVSGLTGGAE  134 (176)
T ss_dssp             TTHH-----------HHHHTEEEE--EEEEECSCCSSSC
T ss_pred             hhHH-----------HHHHHhCCC--ceEEEeecccCcc
Confidence            4221           233333332  4899888765433

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.02  E-value=7.9e-07  Score=69.14  Aligned_cols=38  Identities=21%  Similarity=0.355  Sum_probs=34.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA  121 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~  121 (269)
                      |||.|+||+|.+|++|++.|+++|++|++.+|++++..
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~   38 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE   38 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            57999999999999999999999999999999876543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.01  E-value=3.2e-06  Score=65.84  Aligned_cols=74  Identities=18%  Similarity=0.233  Sum_probs=57.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~a  156 (269)
                      .+.+|+|+||+|.+|...++.....|++|+++++++++ .+.+++.++..+ .|..+.+..++.+     +++|+||++.
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~-~~~~~~~Ga~~v-i~~~~~~~~~~~~~~~~~~Gvd~v~D~v  106 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK-IAYLKQIGFDAA-FNYKTVNSLEEALKKASPDGYDCYFDNV  106 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTTCSEE-EETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHH-HHHHHhhhhhhh-cccccccHHHHHHHHhhcCCCceeEEec
Confidence            46789999999999999999999999999999987553 344555565544 3555665555443     4699999999


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      |
T Consensus       107 G  107 (182)
T d1v3va2         107 G  107 (182)
T ss_dssp             C
T ss_pred             C
Confidence            8

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.01  E-value=1.5e-06  Score=66.41  Aligned_cols=73  Identities=23%  Similarity=0.449  Sum_probs=57.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+.+++|+|+|+ |.+|+.+++.|...|+ ++++..|+.++..++..+.+..++     +.+++.+.+..+|+||.+.+.
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~-----~~~~~~~~l~~~Divi~atss   94 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAV-----RFDELVDHLARSDVVVSATAA   94 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEEC-----CGGGHHHHHHTCSEEEECCSS
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccc-----cchhHHHHhccCCEEEEecCC
Confidence            477899999996 9999999999999997 688999976665554444454433     346788888899999999874

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.94  E-value=5.7e-06  Score=62.77  Aligned_cols=108  Identities=16%  Similarity=0.111  Sum_probs=71.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCcccccc-------CCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRD-------WGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~-------~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      .+.+||.|+|+ |.+|+.++..|...+ .++++++.+++.......+       .+...   .+......++.+++.|+|
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~---~~~~~~~~~~~~~~adiV   80 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNV---SVRAEYSYEAALTGADCV   80 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCC---CEEEECSHHHHHTTCSEE
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCee---EEeccCchhhhhcCCCeE
Confidence            34679999997 999999998888878 4899888876532211111       01100   011123345677899999


Q ss_pred             EEcCCCC----------CCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          153 IDCATGR----------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       153 i~~ag~~----------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      +.++|..          ...+....|..-.+.+++.+++.+.+-++.+-|
T Consensus        81 vitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          81 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            9999832          223455678888888999988887765555543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.93  E-value=4.2e-06  Score=64.55  Aligned_cols=97  Identities=15%  Similarity=0.127  Sum_probs=62.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPE  161 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~  161 (269)
                      .+++|+|+||+|.+|...++.+...|.+|+++++++++. +.+++.+++.+. |..+...-....+++|+||++.|.   
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~-~~~~~lGa~~~i-~~~~~~~~~~~~~g~D~v~d~~G~---  101 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL-ALPLALGAEEAA-TYAEVPERAKAWGGLDLVLEVRGK---  101 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS-HHHHHTTCSEEE-EGGGHHHHHHHTTSEEEEEECSCT---
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccc-ccccccccceee-ehhhhhhhhhccccccccccccch---
Confidence            467899999999999999999999999999999876543 334556665442 443322222233679999998871   


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                       .     +   ...++.++..  +++|.++...
T Consensus       102 -~-----~---~~~~~~l~~~--G~~v~~G~~~  123 (171)
T d1iz0a2         102 -E-----V---EESLGLLAHG--GRLVYIGAAE  123 (171)
T ss_dssp             -T-----H---HHHHTTEEEE--EEEEEC----
T ss_pred             -h-----H---HHHHHHHhcC--CcEEEEeCCC
Confidence             1     1   1233333332  4888887544

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.92  E-value=2.2e-05  Score=59.05  Aligned_cols=101  Identities=14%  Similarity=0.191  Sum_probs=69.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccc---c------ccCCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADF---L------RDWGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~---~------~~~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      .++||.|+|+ |.+|..++-.|+.+|.  ++++++++++.....   +      ......+...|+       +.++++|
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daD   76 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDAD   76 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccce
Confidence            4578999996 9999999999999874  899999875432110   1      111333434443       3467899


Q ss_pred             EEEEcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          151 TVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       151 ~vi~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                      +||.++|...     ..+....|..-.+.+++.+++.+.+-++.+
T Consensus        77 vvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~iv  121 (148)
T d1ldna1          77 LVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLV  121 (148)
T ss_dssp             EEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred             eEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEE
Confidence            9999999422     335566788888888888888775544433

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.92  E-value=0.00013  Score=54.45  Aligned_cols=104  Identities=13%  Similarity=0.103  Sum_probs=60.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC----CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG----YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G----~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      |||.|.||||++|+.+++.|+++.    .++..++.+...... ....+-.....+..+    ...++++|+||.+++  
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-~~~~~~~~~~~~~~~----~~~~~~~DvvF~alp--   73 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-PNFGKDAGMLHDAFD----IESLKQLDAVITCQG--   73 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-CCSSSCCCBCEETTC----HHHHTTCSEEEECSC--
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-cccCCcceeeecccc----hhhhccccEEEEecC--
Confidence            579999999999999999988753    466665554332211 110000000001111    234578999999986  


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEE-EecccCCCCCCCCcHH
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYV-FYSIHNCDKHPEVPLM  204 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V-~~SS~~~~~~~~~~y~  204 (269)
                               -.-+..+.+.+.+.|.+.+| =.|+. .-..+..||+
T Consensus        74 ---------~~~s~~~~~~l~~~g~~~~VIDlSsd-fR~~~dvpl~  109 (147)
T d1mb4a1          74 ---------GSYTEKVYPALRQAGWKGYWIDAAST-LRMDKEAIIT  109 (147)
T ss_dssp             ---------HHHHHHHHHHHHHTTCCSEEEESSST-TTTCTTEEEE
T ss_pred             ---------chHHHHHhHHHHHcCCceEEEeCCcc-ccccCCceEE
Confidence                     12345677777788876444 44543 3344556664

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=5.1e-06  Score=64.14  Aligned_cols=97  Identities=15%  Similarity=0.141  Sum_probs=66.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~a  156 (269)
                      .+.+|||+||+|.+|...++.+...|++|+++++++++ .+.+++.++..+ .|..+.+..+++.     +++|+||++.
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~-~~~~~~~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~d~~  105 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEG-QKIVLQNGAHEV-FNHREVNYIDKIKKYVGEKGIDIIIEML  105 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTTCSEE-EETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccc-cccccccCcccc-cccccccHHHHhhhhhccCCceEEeecc
Confidence            46789999999999999999999999999999987543 344455666443 3666665444432     3589999998


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      |.           ......++.++..  +++|.++..
T Consensus       106 g~-----------~~~~~~~~~l~~~--G~iv~~G~~  129 (174)
T d1yb5a2         106 AN-----------VNLSKDLSLLSHG--GRVIVVGSR  129 (174)
T ss_dssp             HH-----------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred             cH-----------HHHHHHHhccCCC--CEEEEEecC
Confidence            71           1112334444433  488888743

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.88  E-value=3.3e-05  Score=58.76  Aligned_cols=66  Identities=15%  Similarity=0.135  Sum_probs=45.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |||.|+| .|.+|..+++.|.+.|++|++.+|+++...+. .+.++.-...|      ..+.++++|+||.+..
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a-~~~~~~~~~~~------~~~~~~~~DiIilavp   66 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKA-VERQLVDEAGQ------DLSLLQTAKIIFLCTP   66 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTSCSEEES------CGGGGTTCSEEEECSC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHH-HHhhccceeee------ecccccccccccccCc
Confidence            5799998 59999999999999999999999986543332 22232101111      1235678999997763

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.85  E-value=6.1e-06  Score=63.97  Aligned_cols=98  Identities=18%  Similarity=0.213  Sum_probs=67.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~a  156 (269)
                      .+.+|||+||+|.+|...++.+...|.+|+++++++++ .+.+++.++..+ .|..+++-.+++.     +++|++|++.
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~-~~~l~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~  102 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK-REMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSL  102 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHH-HHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccc-cccccccccccc-ccCCccCHHHHHHHHhCCCCEEEEEecc
Confidence            45789999999999999999999999999999987554 345566676644 3555554333332     4699999999


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      |..           .....++.++..  +++|.++...
T Consensus       103 g~~-----------~~~~~~~~l~~~--G~~v~~G~~~  127 (183)
T d1pqwa_         103 AGE-----------AIQRGVQILAPG--GRFIELGKKD  127 (183)
T ss_dssp             CTH-----------HHHHHHHTEEEE--EEEEECSCGG
T ss_pred             cch-----------HHHHHHHHhcCC--CEEEEEccCC
Confidence            821           112234444433  4888886543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.82  E-value=9.5e-05  Score=52.59  Aligned_cols=95  Identities=16%  Similarity=0.141  Sum_probs=67.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc-cccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA-DFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~-~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+++|+|+|+|+ |.+|..-++.|++.|.+|++++....... .+....+++++..++.+     ..+.+.+.|+.+.+ 
T Consensus         9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~dl~~~~lv~~at~-   81 (113)
T d1pjqa1           9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE-----TLLDSCWLAIAATD-   81 (113)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG-----GGGTTCSEEEECCS-
T ss_pred             EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCH-----HHhCCCcEEeecCC-
Confidence            478899999995 99999999999999999999987544322 22334467777766653     23567898887764 


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                               +-.-...+.+.|++.|+  +|++..
T Consensus        82 ---------d~~~n~~i~~~a~~~~i--lVNv~D  104 (113)
T d1pjqa1          82 ---------DDTVNQRVSDAAESRRI--FCNVVD  104 (113)
T ss_dssp             ---------CHHHHHHHHHHHHHTTC--EEEETT
T ss_pred             ---------CHHHHHHHHHHHHHcCC--EEEeCC
Confidence                     12223467788888764  677553

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.79  E-value=1.5e-05  Score=59.60  Aligned_cols=99  Identities=8%  Similarity=0.023  Sum_probs=63.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccc---cccC-----CCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADF---LRDW-----GATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~---~~~~-----~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      +||.|+|+ |.+|..++-.|+.+|.  ++++++++++.....   +.+.     ......+|       .+.+++.|+|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceEE
Confidence            57999996 9999999999999884  899999876643211   1110     11111111       23467899999


Q ss_pred             EcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          154 DCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       154 ~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                      .++|...     ..+....|..-.+.+++.+++.+.+-++.+
T Consensus        74 itag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~iv  115 (142)
T d1y6ja1          74 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV  115 (142)
T ss_dssp             ECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred             EecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEE
Confidence            9998432     223456777778888888888776544433

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.78  E-value=5.8e-05  Score=53.73  Aligned_cols=68  Identities=18%  Similarity=0.321  Sum_probs=55.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVID  154 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~  154 (269)
                      ..||.|.| +|.+|+-++....+.|++|++++.+++......   .-+++.+|+.|.+.+.++..  ++|+|-.
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v---a~~~i~~~~~d~~~l~~~~~~~~~DviT~   80 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV---AHRSHVINMLDGDALRRVVELEKPHYIVP   80 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG---SSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc---CCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence            45899999 599999999999999999999999876654422   34688999999999988773  6798853

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=8e-06  Score=62.05  Aligned_cols=71  Identities=18%  Similarity=0.250  Sum_probs=47.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc-cCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR-DWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |||+|+|+ |.+|..++..|.+.|++|++++|++........ ..+.......+  .......++++|+||.+.-
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~iii~vk   72 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESL--TANDPDFLATSDLLLVTLK   72 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEE--EESCHHHHHTCSEEEECSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCcccccccc--ccchhhhhcccceEEEeec
Confidence            68999997 999999999999999999999998765432211 11111111000  1112344568999999875

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=8.5e-06  Score=62.96  Aligned_cols=74  Identities=18%  Similarity=0.098  Sum_probs=56.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEcC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~a  156 (269)
                      .+.+|+|+||+|.+|..+++.+...|.+|+++++++++.. .+++.++..+ .|..+++..+++.     .++|+|+++.
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~-~~~~lGa~~v-i~~~~~d~~~~v~~~t~g~g~d~v~d~~  105 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ-SALKAGAWQV-INYREEDLVERLKEITGGKKVRVVYDSV  105 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHHHTCSEE-EETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHH-HHHhcCCeEE-EECCCCCHHHHHHHHhCCCCeEEEEeCc
Confidence            4678999999999999999999999999999999866543 3444565543 4777765444432     3589999998


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      +
T Consensus       106 g  106 (179)
T d1qora2         106 G  106 (179)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.74  E-value=9.7e-06  Score=62.90  Aligned_cols=99  Identities=16%  Similarity=0.124  Sum_probs=64.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-cCccEEEEcCCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-VGVHTVIDCATGRPE  161 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-~~~d~vi~~ag~~~~  161 (269)
                      +.+|||+||+|++|...++.....|++|+++++++++. +.+++.++..+ .|..+.+..+.+. ...|.+|++.+..  
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~-~~~~~lGad~v-i~~~~~~~~~~l~~~~~~~vvD~Vgg~--  107 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH-EYLKSLGASRV-LPRDEFAESRPLEKQVWAGAIDTVGDK--  107 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH-HHHHHHTEEEE-EEGGGSSSCCSSCCCCEEEEEESSCHH--
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHH-HHHHhhccccc-cccccHHHHHHHHhhcCCeeEEEcchH--
Confidence            35799999999999999999999999999999976654 33455565544 2444433322222 2368999988721  


Q ss_pred             ccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCC
Q 024290          162 EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCD  196 (269)
Q Consensus       162 ~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~  196 (269)
                               .....++.++..  +++|.++.....
T Consensus       108 ---------~~~~~l~~l~~~--Griv~~G~~~~~  131 (177)
T d1o89a2         108 ---------VLAKVLAQMNYG--GCVAACGLAGGF  131 (177)
T ss_dssp             ---------HHHHHHHTEEEE--EEEEECCCTTCS
T ss_pred             ---------HHHHHHHHhccc--cceEeecccCCc
Confidence                     112233333322  489998876543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.73  E-value=7.1e-05  Score=56.15  Aligned_cols=73  Identities=11%  Similarity=0.143  Sum_probs=59.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc---ccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~---~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag  157 (269)
                      ..|+|.|. |-+|..+++.|.++|++|+++..+++...+   .+...++.++.+|.+|++.++++ ++.+|+||-+..
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~   80 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence            35899986 899999999999999999999987653222   22345899999999999988776 467899998875

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.73  E-value=8.6e-05  Score=55.16  Aligned_cols=100  Identities=15%  Similarity=0.086  Sum_probs=66.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCccc---cc------cCCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADF---LR------DWGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~---~~------~~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      |||.|+|+ |.+|+.++..|+..|  .++++++++++.....   +.      .....+...+  |    .+.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~----~~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--D----YADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--C----GGGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--C----HHHhcCCeEE
Confidence            58999996 999999999999988  5899999876542211   11      1123333221  1    2346789999


Q ss_pred             EEcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          153 IDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       153 i~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                      +.++|...     ..+....|..-.+.+++.+.+.+.+-++.+
T Consensus        74 vitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aiviv  116 (142)
T d1guza1          74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIV  116 (142)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred             EEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence            99999422     223455677777788888887765544444

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.70  E-value=7.4e-05  Score=56.94  Aligned_cols=98  Identities=23%  Similarity=0.287  Sum_probs=62.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEE-EEcCCCCCC--cHHHHh-----cCccEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATV-VNADLSKPE--TIPATL-----VGVHTVI  153 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~-i~~Dl~d~~--~l~~~~-----~~~d~vi  153 (269)
                      .+.+|+|+| +|.+|...++.+...|.+|+++++++++.. ..++.+... +..|-.+.+  ++.+.+     +++|+||
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~-~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vi  103 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLE-VAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTI  103 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHH-HHHHcCCcEEEeccccccccchhhhhhhcccccCCceee
Confidence            356899997 699999999999999999999999765532 234445433 333433222  222222     3689999


Q ss_pred             EcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          154 DCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       154 ~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      .++|..          ......++.++..  +++++++..
T Consensus       104 d~~g~~----------~~~~~a~~~~~~~--G~iv~~G~~  131 (170)
T d1e3ja2         104 DCSGNE----------KCITIGINITRTG--GTLMLVGMG  131 (170)
T ss_dssp             ECSCCH----------HHHHHHHHHSCTT--CEEEECSCC
T ss_pred             ecCCCh----------HHHHHHHHHHhcC--CceEEEecC
Confidence            999831          1112234444433  489988854

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.67  E-value=4.4e-05  Score=56.71  Aligned_cols=100  Identities=16%  Similarity=0.091  Sum_probs=66.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCcccc-------c-cCCCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADFL-------R-DWGATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~-------~-~~~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      |||.|+|+ |.+|..++-.|+.++  .++++++++++......       . .........|   .    +.++++|+||
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---Y----ADLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---G----GGGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---H----HHhcCCCEEE
Confidence            58999996 999999999998887  58999998754321100       0 1123333333   2    3467899999


Q ss_pred             EcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          154 DCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       154 ~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      .++|...     ..+....|..-.+.+++.+.+.+.+-++.+-
T Consensus        73 itag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivv  115 (140)
T d1a5za1          73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVV  115 (140)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEe
Confidence            9998432     2244556777778888888887766555543

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.66  E-value=6.8e-05  Score=55.95  Aligned_cols=94  Identities=21%  Similarity=0.169  Sum_probs=56.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG---YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G---~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      .++|.|.||||++|+.+++.|.+++   .++..+..+...... +....-....-++.+     ..+.++|++|.+++  
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~-i~~~~~~~~~~~~~~-----~~~~~~d~vf~a~p--   73 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR-MGFAESSLRVGDVDS-----FDFSSVGLAFFAAA--   73 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE-EEETTEEEECEEGGG-----CCGGGCSEEEECSC--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcc-eeeccccchhccchh-----hhhccceEEEecCC--
Confidence            4679999999999999999998665   477776654433222 111111111112211     12357899998876  


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                               -.....+...+.+.|. ++|-.|+..
T Consensus        74 ---------~~~s~~~~~~~~~~g~-~VID~Ss~f   98 (144)
T d2hjsa1          74 ---------AEVSRAHAERARAAGC-SVIDLSGAL   98 (144)
T ss_dssp             ---------HHHHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             ---------cchhhhhccccccCCc-eEEeechhh
Confidence                     1233455666666664 777777654

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.65  E-value=6.9e-05  Score=55.76  Aligned_cols=98  Identities=15%  Similarity=0.054  Sum_probs=65.7

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCC--Cc---cccc-----cCCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           85 SILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPA--PA---DFLR-----DWGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~--~~---~~~~-----~~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      ||.|+||+|.+|+.++-.|+.+|.  ++++++.+..+  ..   ..+.     .....+...|+   +    .+.++|+|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H----HhhhcCEE
Confidence            799999999999999999999983  78888863211  10   0011     12344444443   2    24689999


Q ss_pred             EEcCCCC-----CCccchhhcHHHHHHHHHHHHHcCCCeEEE
Q 024290          153 IDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQKYVF  189 (269)
Q Consensus       153 i~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~  189 (269)
                      |.+||..     ...+....|..-.+.+++..++.+.+-++.
T Consensus        75 vitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~i  116 (142)
T d1o6za1          75 VITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISL  116 (142)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEE
T ss_pred             EEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEE
Confidence            9999932     223456678888888899888887554443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.65  E-value=7.5e-05  Score=55.82  Aligned_cols=100  Identities=15%  Similarity=0.099  Sum_probs=66.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCccc---c----cc--CCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADF---L----RD--WGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~---~----~~--~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      |||.|+|+ |.+|..++-.|+.+|  .+++++++++++....   +    ..  ........|   .    +.++++|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~----~~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---H----HHhccccEE
Confidence            78999995 999999999999887  4899998865432110   1    11  123333333   2    335689999


Q ss_pred             EEcCCCC---------CCccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          153 IDCATGR---------PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       153 i~~ag~~---------~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      |.++|..         ...+....|..-.+.+.+.+++.+.+-++.+-
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivv  121 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI  121 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe
Confidence            9999931         11234567888888888888888766554443

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.65  E-value=7.4e-05  Score=55.94  Aligned_cols=39  Identities=28%  Similarity=0.371  Sum_probs=35.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      ...+++|.|+||.|.+|+.+++.|.++||+|.+.+|+..
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~   44 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   44 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccc
Confidence            356789999999999999999999999999999998643

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=5.5e-05  Score=58.64  Aligned_cols=77  Identities=16%  Similarity=0.268  Sum_probs=61.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCcccc-------ccCCCEEEEcCCCCCCcHHHHhcCccE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFL-------RDWGATVVNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~-------~~~~~~~i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      .+.+++|+|.|+ |+.|++++..|.+.|. +++++.|+++...+..       ..........|+.+.+.+...+..+|+
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence            467899999995 8999999999999995 7888899876543321       122455667888888888888889999


Q ss_pred             EEEcCC
Q 024290          152 VIDCAT  157 (269)
Q Consensus       152 vi~~ag  157 (269)
                      |||+..
T Consensus        94 iIN~Tp   99 (182)
T d1vi2a1          94 LTNGTK   99 (182)
T ss_dssp             EEECSS
T ss_pred             eccccC
Confidence            999976

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.63  E-value=0.0001  Score=55.93  Aligned_cols=104  Identities=14%  Similarity=0.079  Sum_probs=68.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccc---ccc----CC-CEEEEcCCCCCCcHHHHhcCcc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADF---LRD----WG-ATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~---~~~----~~-~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      +..+||.|+|+ |.+|..++-.|+.+|.  ++++++++++.....   +.+    .+ ...+..  .|.    +.+++.|
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~--~d~----~~~~~ad   90 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD--KDY----SVTANSK   90 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC--SSG----GGGTTCS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec--cch----hhccccc
Confidence            55679999996 9999999999999984  899999875432110   111    11 122211  122    3356899


Q ss_pred             EEEEcCCCC-----CCccchhhcHHHHHHHHHHHHHcCCCe-EEEec
Q 024290          151 TVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQK-YVFYS  191 (269)
Q Consensus       151 ~vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v~r-~V~~S  191 (269)
                      +||.+||..     ...+....|..-.+.+++.+++.+.+- ++.+|
T Consensus        91 iVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          91 IVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            999999942     233455678888888888888877654 44444

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.63  E-value=3.2e-05  Score=59.13  Aligned_cols=75  Identities=13%  Similarity=0.076  Sum_probs=54.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCC-CCCcHHHHhcCccEEEEcCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLS-KPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~-d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      .+.+|+|+|+ |.+|...++.+...|.+|+++++++++.. ..++.++..+. |.. +.+..++..++.|+++.+.+..
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~-~a~~lGa~~~i-~~~~~~~~~~~~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE-DAMKMGADHYI-ATLEEGDWGEKYFDTFDLIVVCASSL  102 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHHTCSEEE-EGGGTSCHHHHSCSCEEEEEECCSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHH-HhhccCCcEEe-eccchHHHHHhhhcccceEEEEecCC
Confidence            4678999996 99999999988889999999999876543 34455654332 333 3344445556789999998743

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.63  E-value=0.00027  Score=53.43  Aligned_cols=66  Identities=21%  Similarity=0.310  Sum_probs=50.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |++|.++| .|.+|..+++.|+++||+|.+.+|++++.... ...+.       .......+++...|+|+-+..
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~-~~~~~-------~~~~~~~e~~~~~diii~~v~   66 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGL-VAAGA-------SAARSARDAVQGADVVISMLP   66 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHH-HHTTC-------EECSSHHHHHTSCSEEEECCS
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhh-hhhhc-------cccchhhhhccccCeeeeccc
Confidence            57899998 79999999999999999999999986554332 22221       123456778888999998875

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.61  E-value=5.8e-05  Score=57.25  Aligned_cols=102  Identities=15%  Similarity=0.085  Sum_probs=67.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccc---cc----cCC-CEEE-EcCCCCCCcHHHHhcC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADF---LR----DWG-ATVV-NADLSKPETIPATLVG  148 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~---~~----~~~-~~~i-~~Dl~d~~~l~~~~~~  148 (269)
                      .++..||.|+|+ |.+|..++-.|+.+|.  ++++++++++.....   +.    ..+ ...+ ..|   .    +.+++
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~----~~~~~   87 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---Y----NVSAN   87 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---G----GGGTT
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---h----hhhcc
Confidence            466678999995 9999999999999884  899999875432110   11    111 1222 222   2    34468


Q ss_pred             ccEEEEcCCC-----CCCccchhhcHHHHHHHHHHHHHcCCCeEEE
Q 024290          149 VHTVIDCATG-----RPEEPIKKVDWEGKVALIQCAKAMGIQKYVF  189 (269)
Q Consensus       149 ~d~vi~~ag~-----~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~  189 (269)
                      .|+||.++|.     ....+.++.|..-.+.+++.+++.+.+-++.
T Consensus        88 adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivi  133 (159)
T d2ldxa1          88 SKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKII  133 (159)
T ss_dssp             EEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEE
T ss_pred             ccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEE
Confidence            9999999984     2334566778888888888888776654443

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.57  E-value=7.8e-05  Score=57.61  Aligned_cols=95  Identities=15%  Similarity=0.079  Sum_probs=55.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEe-CCCCC-Cccccc--------cCCCEEEEcCCCCCCcHHHHhcCccE
Q 024290           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCLV-RPRPA-PADFLR--------DWGATVVNADLSKPETIPATLVGVHT  151 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~-R~~~~-~~~~~~--------~~~~~~i~~Dl~d~~~l~~~~~~~d~  151 (269)
                      |++|.|.||||++|+.|++.|.+. .+++..+. +..+. .-+.+.        ........     .++......++|+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dv   75 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQP-----MSDVRDFSADVDV   75 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEE-----ESCGGGTCTTCCE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeeccccccccccccccccccccccccccc-----chhhhhhhcccce
Confidence            579999999999999999999997 46776553 22111 111110        00111111     1223334467899


Q ss_pred             EEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          152 VIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       152 vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      +|.+.+           -.....+.....+.++ ++|-.|+..
T Consensus        76 vf~alp-----------~~~s~~~~~~~~~~~~-~vIDlSadf  106 (179)
T d2g17a1          76 VFLATA-----------HEVSHDLAPQFLQAGC-VVFDLSGAF  106 (179)
T ss_dssp             EEECSC-----------HHHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             eecccc-----------chhHHHHhhhhhhcCc-eeecccccc
Confidence            999876           1222345555566664 777777653

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.56  E-value=4.1e-05  Score=58.75  Aligned_cols=72  Identities=14%  Similarity=0.186  Sum_probs=49.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCC--CEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG--ATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~--~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ...+|+|+|.|+ |+.+++++..|.+.|.+|+++.|+.++..++.+...  ......++.+.     ....+|+|||+..
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~dliIN~Tp   88 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL-----EGHEFDLIINATS   88 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG-----TTCCCSEEEECCS
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccc-----cccccceeecccc
Confidence            467899999995 999999999999999999999998655433222111  11222232221     1246899999975

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.56  E-value=1.8e-05  Score=60.72  Aligned_cols=98  Identities=24%  Similarity=0.276  Sum_probs=62.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCC--CCcHHHHh-cCccEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK--PETIPATL-VGVHTVIDCATGR  159 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d--~~~l~~~~-~~~d~vi~~ag~~  159 (269)
                      +..|||+||+|++|...++.....|++|+++++++++.. .+++.++..+. |..+  .+.+...- +++|+||++.|..
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~-~~~~lGad~vi-~~~~~~~~~~~~~~~~gvd~vid~vgg~  101 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD-YLKQLGASEVI-SREDVYDGTLKALSKQQWQGAVDPVGGK  101 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH-HHHHHTCSEEE-EHHHHCSSCCCSSCCCCEEEEEESCCTH
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHH-HHHhhcccceE-eccchhchhhhcccCCCceEEEecCcHH
Confidence            456999999999999999998899999999999866543 34444554432 3221  12221111 4689999998732


Q ss_pred             CCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCC
Q 024290          160 PEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNC  195 (269)
Q Consensus       160 ~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~  195 (269)
                      .           ....++.++..  +++|.++..+.
T Consensus       102 ~-----------~~~~~~~l~~~--G~iv~~G~~~g  124 (167)
T d1tt7a2         102 Q-----------LASLLSKIQYG--GSVAVSGLTGG  124 (167)
T ss_dssp             H-----------HHHHHTTEEEE--EEEEECCCSSC
T ss_pred             H-----------HHHHHHHhccC--ceEEEeeccCC
Confidence            1           11233333332  48888876654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.55  E-value=3.8e-05  Score=59.06  Aligned_cols=74  Identities=11%  Similarity=0.021  Sum_probs=51.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-------CCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-------WGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-------~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      .|||.|+|+ |.+|..++..|.++|++|.+++|+++........       .+............++.++++++|+||.+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~   79 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV   79 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence            379999996 9999999999999999999999975443221111       11222222222234577888999999987


Q ss_pred             CC
Q 024290          156 AT  157 (269)
Q Consensus       156 ag  157 (269)
                      ..
T Consensus        80 v~   81 (184)
T d1bg6a2          80 VP   81 (184)
T ss_dssp             SC
T ss_pred             Ec
Confidence            64

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=97.55  E-value=0.00029  Score=48.58  Aligned_cols=86  Identities=22%  Similarity=0.292  Sum_probs=60.3

Q ss_pred             CCCEEEEECCCcHHH-HHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC
Q 024290           82 RPTSILVVGATGTLG-RQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        82 ~~~~vlVtGatG~iG-~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      ..|+|.+.|- |++| ++||+.|.++|++|.+.++......+.+.+.++.+..++-  ++    .+.+.|.||...+...
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~--~~----~i~~~d~vV~S~AI~~   79 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHA--EE----HIEGASVVVVSSAIKD   79 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCC--GG----GGTTCSEEEECTTSCT
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCc--cc----cCCCCCEEEECCCcCC
Confidence            4578999984 5555 7789999999999999999766555666677888776553  22    2357899999887543


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCC
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQ  185 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~  185 (269)
                      ...           -+.+|++.|++
T Consensus        80 ~np-----------el~~A~~~gip   93 (96)
T d1p3da1          80 DNP-----------ELVTSKQKRIP   93 (96)
T ss_dssp             TCH-----------HHHHHHHTTCC
T ss_pred             CCH-----------HHHHHHHcCCC
Confidence            321           24456666763

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.53  E-value=1.4e-05  Score=60.55  Aligned_cols=105  Identities=13%  Similarity=0.120  Sum_probs=62.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCCC--CCCcc---ccccC---CCEEEEcCCCCCCcHHHHhc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPR--PAPAD---FLRDW---GATVVNADLSKPETIPATLV  147 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-------~V~~~~R~~--~~~~~---~~~~~---~~~~i~~Dl~d~~~l~~~~~  147 (269)
                      ++||.|+||+|++|++++-.|+..+.       ...++.-..  +....   .+.+.   ....+.    ..+...+.++
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~   79 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLE----ATDDPKVAFK   79 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE----EESCHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccc----cCCchhhhcc
Confidence            46899999999999999999987652       112222211  11100   00111   111122    1344567889


Q ss_pred             CccEEEEcCCCCC-----CccchhhcHHHHHHHHHHHHHcC-CC-eEEEec
Q 024290          148 GVHTVIDCATGRP-----EEPIKKVDWEGKVALIQCAKAMG-IQ-KYVFYS  191 (269)
Q Consensus       148 ~~d~vi~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~-v~-r~V~~S  191 (269)
                      +.|+||.++|...     ..+....|..-.+.+.+.+.+.. -. .++.+|
T Consensus        80 ~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          80 DADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            9999999999422     23455677888888888888753 22 444444

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.52  E-value=3.4e-05  Score=58.97  Aligned_cols=74  Identities=19%  Similarity=0.272  Sum_probs=56.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+.+|+|.|+ |.+|...++.+...|++++++++++++. +..++.++..+ .|..+.+......+++|++|.+.|.
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~-~~a~~lGad~~-i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEV-VNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHTCSEE-EETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHH-HHHhccCCcEE-EECchhhHHHHhcCCCceeeeeeec
Confidence            4678999986 9999999999999999999999876543 34445565443 4666666555566789999999984

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.52  E-value=0.00016  Score=53.83  Aligned_cols=100  Identities=13%  Similarity=0.123  Sum_probs=66.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCccc---ccc----C-CCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADF---LRD----W-GATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~---~~~----~-~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      .||.|+|+ |.+|.+++-.|+.+|  .++++++++++.....   +.+    . ...+...+     +. +.+++.|+||
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~-----~~-~~~~daDvVV   74 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD-----DP-EICRDADMVV   74 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES-----CG-GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC-----CH-HHhhCCcEEE
Confidence            57999996 999999999999998  4899999875432111   111    1 12222221     22 2456899999


Q ss_pred             EcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          154 DCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       154 ~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                      .++|...     ..+....|..-.+.+++.+++.+.+-++.+
T Consensus        75 itaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~iv  116 (143)
T d1llda1          75 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYML  116 (143)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             EecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEE
Confidence            9999422     234556788888888888888876555444

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.50  E-value=9.6e-05  Score=56.94  Aligned_cols=108  Identities=12%  Similarity=0.044  Sum_probs=66.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEeCCCCCC--cc---ccccCCCEEEEcCCCCCCcHHHHhcCcc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG-------YDVRCLVRPRPAP--AD---FLRDWGATVVNADLSKPETIPATLVGVH  150 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G-------~~V~~~~R~~~~~--~~---~~~~~~~~~i~~Dl~d~~~l~~~~~~~d  150 (269)
                      ..||.|+||+|.||++++-.|++.+       .++.+++.+....  ..   .+.+..... .-.+.-..+..+.+++.|
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~-~~~~~~~~~~~~~~~~aD  102 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPL-LREVSIGIDPYEVFEDVD  102 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT-EEEEEEESCHHHHTTTCS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccccc-ccCccccccchhhccCCc
Confidence            3579999999999999999998753       1455555543211  00   011111000 001111234667889999


Q ss_pred             EEEEcCCCC-----CCccchhhcHHHHHHHHHHHHHcCC-C-eEEEec
Q 024290          151 TVIDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGI-Q-KYVFYS  191 (269)
Q Consensus       151 ~vi~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v-~-r~V~~S  191 (269)
                      +||.++|..     ...+.+..|..-.+.+.+++.+... . +++.+|
T Consensus       103 vVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         103 WALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             eEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            999999842     3345667788888889998888532 2 455554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.48  E-value=0.00016  Score=53.67  Aligned_cols=99  Identities=17%  Similarity=0.190  Sum_probs=64.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccc---cc------cCCCEEEE-cCCCCCCcHHHHhcCccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADF---LR------DWGATVVN-ADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~---~~------~~~~~~i~-~Dl~d~~~l~~~~~~~d~v  152 (269)
                      +||.|+|+ |.+|..++-.|+.++ .++++++.+++.....   +.      .....+.. .|+       +.+.+.|+|
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-------~~~~~advv   73 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-------ADTANSDVI   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-------GGGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-------HHhcCCCEE
Confidence            68999996 999999999998877 5899998866532111   00      11122221 222       234689999


Q ss_pred             EEcCCCC-----CCccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          153 IDCATGR-----PEEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       153 i~~ag~~-----~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                      |.+||..     ...+....|..-.+.+++...+.+.+-++.+
T Consensus        74 vitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aiviv  116 (142)
T d1uxja1          74 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIM  116 (142)
T ss_dssp             EECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEE
T ss_pred             EEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEE
Confidence            9999942     2345566788888888888888776655544

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.45  E-value=0.00049  Score=51.45  Aligned_cols=101  Identities=15%  Similarity=0.143  Sum_probs=67.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccc---cc------cCCCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADF---LR------DWGATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~---~~------~~~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      +||.|+|+ |.+|+.++..|+.++ .++++++++++.....   +.      .....+...|  +    .+.+++.|+||
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~----~~~~~~advvv   76 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T----YDDLAGADVVI   76 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C----GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c----ccccCCCcEEE
Confidence            58999995 999999998888777 5899999876542211   11      1122333222  1    23456899999


Q ss_pred             EcCCCCC----------CccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          154 DCATGRP----------EEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       154 ~~ag~~~----------~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      .++|...          ..+....|..-.+.+++.+++.+.+-++.+-
T Consensus        77 itag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivv  124 (150)
T d1t2da1          77 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVV  124 (150)
T ss_dssp             ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             EecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            9999321          2344667888888899989888766555543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.44  E-value=0.00013  Score=55.24  Aligned_cols=65  Identities=23%  Similarity=0.304  Sum_probs=49.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |||.|+| .|.+|+.+++.|+++||+|++.+|++++..++ .+.+...       .+...++++++|+||-|..
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~-~~~~~~~-------~~~~~e~~~~~d~ii~~v~   65 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADV-IAAGAET-------ASTAKAIAEQCDVIITMLP   65 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHH-HHhhhhh-------cccHHHHHhCCCeEEEEcC
Confidence            5799998 69999999999999999999999986654432 2333322       2455667778899998874

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.43  E-value=0.00011  Score=54.68  Aligned_cols=102  Identities=12%  Similarity=0.015  Sum_probs=65.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCCCCCccc---cc------cCCCEEEEcCCCCCCcHHHHhcCccEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPRPAPADF---LR------DWGATVVNADLSKPETIPATLVGVHTV  152 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~---~~------~~~~~~i~~Dl~d~~~l~~~~~~~d~v  152 (269)
                      |||.|+|+ |.+|..++-.|+.+|  .++++++++++.....   +.      .....+...+     + .+.+.+.|+|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~-----d-~~~~~~adiV   73 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA-----D-YSLLKGSEII   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES-----C-GGGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCC-----C-HHHhccccEE
Confidence            68999996 999999999999887  4899999875432110   10      0112222211     1 1356789999


Q ss_pred             EEcCCCCC-----CccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          153 IDCATGRP-----EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       153 i~~ag~~~-----~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      |..+|...     ..+....|..-...+.+.+++.+.+-++.+-|
T Consensus        74 vitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            99998422     23445567777777888888877655555443

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.42  E-value=6.3e-05  Score=49.79  Aligned_cols=38  Identities=26%  Similarity=0.398  Sum_probs=34.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA  119 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~  119 (269)
                      .+++|+|+||+|++|...++.+...|++|+++++++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            45789999999999999999999999999999997654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.41  E-value=0.00027  Score=54.21  Aligned_cols=72  Identities=21%  Similarity=0.285  Sum_probs=50.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCC-CEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG-ATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~-~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+|-|+| .|.+|..+++.|+++||+|++.+|++++..++.++.. ..... .....+++...+...|.++-+..
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~-~a~~~~~~~~~~~~~~~ii~~~~   75 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVL-GAHSLEEMVSKLKKPRRIILLVK   75 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCE-ECSSHHHHHHHBCSSCEEEECSC
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccccccc-chhhhhhhhhhhcccceEEEecC
Confidence            5699999 6999999999999999999999998766544332210 00001 12344566677778899988764

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.40  E-value=0.00019  Score=57.38  Aligned_cols=134  Identities=13%  Similarity=0.142  Sum_probs=76.3

Q ss_pred             CCCCCEEEEEC----------------CCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcH-
Q 024290           80 PVRPTSILVVG----------------ATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETI-  142 (269)
Q Consensus        80 ~~~~~~vlVtG----------------atG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l-  142 (269)
                      .+.+++||||+                .||..|.+|++++..+|++|+++.-......    ..++..+.  +...+++ 
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~----p~~~~~~~--~~t~~~m~   76 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT----PPFVKRVD--VMTALEME   76 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC----CTTEEEEE--CCSHHHHH
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc----ccccccce--ehhhHHHH
Confidence            46677777774                4799999999999999999999987543211    11344443  3333333 


Q ss_pred             ---HHHhcCccEEEEcCCCCCCcc----------------chhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcH
Q 024290          143 ---PATLVGVHTVIDCATGRPEEP----------------IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPL  203 (269)
Q Consensus       143 ---~~~~~~~d~vi~~ag~~~~~~----------------~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y  203 (269)
                         .+.+...|++|++|+..++..                ...+++.-+..+++...+....+.+.++... +..  .. 
T Consensus        77 ~~~~~~~~~~D~~i~aAAvsDf~~~~~~~~k~Kk~~~~~~~l~L~L~~tpdIL~~l~~~k~~~~~~VGFaa-Et~--~l-  152 (223)
T d1u7za_          77 AAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAA-ETN--NV-  152 (223)
T ss_dssp             HHHHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEEEEEEE-ESS--SH-
T ss_pred             HHHHhhhccceeEeeeechhhhhhhhhhhhhcccccccccccceeeecCHHHHHHHHhhccCCceEEEEee-ccc--ch-
Confidence               333468899999998533210                0112222234466666554433333333321 111  11 


Q ss_pred             HHHHHHHHHHHHhcCCCEEEEEc
Q 024290          204 MEIKYCTEQFLQDSGLPHVIIRL  226 (269)
Q Consensus       204 ~~sK~~~e~~~~~~gi~~~ilrp  226 (269)
                        -+.+.+ -+.+.++++++.-.
T Consensus       153 --~~~A~~-Kl~~K~~D~IvAN~  172 (223)
T d1u7za_         153 --EEYARQ-KRIRKNLDLICAND  172 (223)
T ss_dssp             --HHHHHH-HHHHHTCSEEEEEE
T ss_pred             --hhHHHH-HHHhcCCCEEEeec
Confidence              122222 35678899988764

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=0.00026  Score=53.92  Aligned_cols=99  Identities=19%  Similarity=0.219  Sum_probs=62.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEE-cCCCCCCcHHHHh-----cCccEEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVN-ADLSKPETIPATL-----VGVHTVID  154 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~-~Dl~d~~~l~~~~-----~~~d~vi~  154 (269)
                      .+.+|+|+|+ |.+|...+..+...|. +|+++++++.+.. ..++.+++.+. .+-.+..+..+.+     .++|+||.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~-~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid  103 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLS-KAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIE  103 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHH-HHHHhCCcccccccccccccccccccccCCCCceEEEe
Confidence            3568999986 9999999999999998 7999988755433 34455665443 2222333333333     36899999


Q ss_pred             cCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          155 CATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       155 ~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      +.|..          ......++.++.  -+++++++...
T Consensus       104 ~~G~~----------~~~~~a~~~~~~--gG~iv~~G~~~  131 (171)
T d1pl8a2         104 CTGAE----------ASIQAGIYATRS--GGTLVLVGLGS  131 (171)
T ss_dssp             CSCCH----------HHHHHHHHHSCT--TCEEEECSCCC
T ss_pred             ccCCc----------hhHHHHHHHhcC--CCEEEEEecCC
Confidence            99831          111223333333  25888888543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=2.9e-05  Score=60.93  Aligned_cols=102  Identities=14%  Similarity=0.157  Sum_probs=64.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc----------cCCC-----------EEEEcCCCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLR----------DWGA-----------TVVNADLSKP  139 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~----------~~~~-----------~~i~~Dl~d~  139 (269)
                      |+-++|.|+|+ |.+|+.++..++..|++|++.+++++...+...          +.+.           .-....+.-.
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~   80 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS   80 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhcccc
Confidence            55689999996 999999999999999999999998653221110          0000           0000112223


Q ss_pred             CcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          140 ETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       140 ~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      .++..++.++|.|+-+..         -|+.--+.+++...+.-....|+.|+
T Consensus        81 ~d~~~a~~~ad~ViEav~---------E~l~~K~~v~~~l~~~~~~~~ilasn  124 (192)
T d1f0ya2          81 TDAASVVHSTDLVVEAIV---------ENLKVKNELFKRLDKFAAEHTIFASN  124 (192)
T ss_dssp             SCHHHHTTSCSEEEECCC---------SCHHHHHHHHHHHTTTSCTTCEEEEC
T ss_pred             chhHhhhcccceehhhcc---------cchhHHHHHHHHHhhhcccCceeecc
Confidence            456677889999999875         23444456666665543334444443

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.31  E-value=9.3e-05  Score=55.77  Aligned_cols=107  Identities=11%  Similarity=0.054  Sum_probs=64.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEeCCCCCC--ccc---cccCC-CEEEEcCCCCCCcHHHHhcCc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-------DVRCLVRPRPAP--ADF---LRDWG-ATVVNADLSKPETIPATLVGV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-------~V~~~~R~~~~~--~~~---~~~~~-~~~i~~Dl~d~~~l~~~~~~~  149 (269)
                      .+||.|+||+|.+|++++-.|+..+.       +++.++.+....  ..+   +.+.. ........  .....+.+++.
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   80 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--TDKEEIAFKDL   80 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--ESCHHHHTTTC
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc--CcccccccCCc
Confidence            46899999999999999999886541       345554432211  000   01111 11111111  23456778899


Q ss_pred             cEEEEcCCC-----CCCccchhhcHHHHHHHHHHHHHc-CCC-eEEEec
Q 024290          150 HTVIDCATG-----RPEEPIKKVDWEGKVALIQCAKAM-GIQ-KYVFYS  191 (269)
Q Consensus       150 d~vi~~ag~-----~~~~~~~~~n~~~~~~li~a~~~~-~v~-r~V~~S  191 (269)
                      |+||.++|.     ....+.+..|..-.+.+.+...+. +-. .++.+|
T Consensus        81 dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          81 DVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             SEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             eEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            999999994     234456677888888888887664 433 344444

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=97.31  E-value=0.002  Score=45.75  Aligned_cols=103  Identities=17%  Similarity=0.227  Sum_probs=68.2

Q ss_pred             CEEEEECCC---cHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC
Q 024290           84 TSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        84 ~~vlVtGat---G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      |+|.|+|++   +..|..+.+.|++.||+|+.+..+.+   +.          ..+.-..++.++-+.+|.++-+..   
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~---~i----------~G~~~y~sl~~lp~~~D~vvi~vp---   65 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYD---EI----------EGLKCYRSVRELPKDVDVIVFVVP---   65 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS---EE----------TTEECBSSGGGSCTTCCEEEECSC---
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccc---cc----------cCccccccchhccccceEEEEEeC---
Confidence            679999988   77999999999999999887743321   11          112222344444456898887754   


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                              -.....+++.+.+.|++.+++-+...            ...+++++++.|++++
T Consensus        66 --------~~~~~~~l~~~~~~g~k~v~~~~g~~------------~~~~~~~a~~~gi~vi  107 (116)
T d1y81a1          66 --------PKVGLQVAKEAVEAGFKKLWFQPGAE------------SEEIRRFLEKAGVEYS  107 (116)
T ss_dssp             --------HHHHHHHHHHHHHTTCCEEEECTTSC------------CHHHHHHHHHHTCEEE
T ss_pred             --------HHHHHHHHHHHHhcCCceEEeccchh------------hHHHHHHHHHcCCEEE
Confidence                    34556788888899997665533211            1245677888888653

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.30  E-value=0.00081  Score=45.52  Aligned_cols=84  Identities=20%  Similarity=0.289  Sum_probs=60.0

Q ss_pred             CEEEEECCCcHHHH-HHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCCCc
Q 024290           84 TSILVVGATGTLGR-QIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE  162 (269)
Q Consensus        84 ~~vlVtGatG~iG~-~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~~~  162 (269)
                      |||-++|- |++|- .||+.|+++|++|.+.++......+.|++.++.+..+.  +++.+    .++|.||...+.....
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh--~~~~i----~~~d~vV~SsAI~~~n   74 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPH--SADNW----YDPDLVIKTPAVRDDN   74 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSC--CTTSC----CCCSEEEECTTCCTTC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeee--ccccc----CCCCEEEEecCcCCCC
Confidence            67888885 45554 78999999999999999987666666788888776542  23333    5789999988865432


Q ss_pred             cchhhcHHHHHHHHHHHHHcCCC
Q 024290          163 PIKKVDWEGKVALIQCAKAMGIQ  185 (269)
Q Consensus       163 ~~~~~n~~~~~~li~a~~~~~v~  185 (269)
                      .           -+.+|++.|++
T Consensus        75 p-----------el~~A~~~gIp   86 (89)
T d1j6ua1          75 P-----------EIVRARMERVP   86 (89)
T ss_dssp             H-----------HHHHHHHTTCC
T ss_pred             H-----------HHHHHHHcCCC
Confidence            2           35567777763

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.28  E-value=0.00014  Score=57.13  Aligned_cols=73  Identities=14%  Similarity=0.135  Sum_probs=48.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEE-------------EcCCCCCCcHHHHhcCcc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVV-------------NADLSKPETIPATLVGVH  150 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i-------------~~Dl~d~~~l~~~~~~~d  150 (269)
                      |||.|+| .|++|..++..|++.|++|++++.+.+....+ ......+.             ...+.-..++.+++++.|
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l-n~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d   78 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI-NQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh-cccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCC
Confidence            6799997 69999999999999999999999865432211 10000000             001111244566677899


Q ss_pred             EEEEcCCC
Q 024290          151 TVIDCATG  158 (269)
Q Consensus       151 ~vi~~ag~  158 (269)
                      +++.|.+.
T Consensus        79 ~i~i~VpT   86 (202)
T d1mv8a2          79 VSFICVGT   86 (202)
T ss_dssp             EEEECCCC
T ss_pred             EEEEecCc
Confidence            99999874

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.27  E-value=0.00028  Score=51.18  Aligned_cols=70  Identities=17%  Similarity=0.225  Sum_probs=55.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag  157 (269)
                      |.++|.|. |-+|+.+++.|  +|++|+++..+++.. +.+...++.++.+|.++++.+.++ ++.++.+|-+..
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~-~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~   71 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVR-KKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLE   71 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHH-HHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHH-HHHHhcCccccccccCCHHHHHHhhhhcCcEEEEecc
Confidence            46889985 88999999998  467888888865543 334566899999999999888776 467899997764

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.24  E-value=0.0019  Score=46.75  Aligned_cols=114  Identities=11%  Similarity=0.052  Sum_probs=71.8

Q ss_pred             CCCCEEEEECCC---cHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           81 VRPTSILVVGAT---GTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        81 ~~~~~vlVtGat---G~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      +..++|.|+|++   +..|..+.+.|.+.| ++|+.+..+.+...      +... .-++.|      +-+.+|.++-+.
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~------G~~~-y~sl~d------lp~~vDlvvi~v   72 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ------GVKA-YKSVKD------IPDEIDLAIIVV   72 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET------TEEC-BSSTTS------CSSCCSEEEECS
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC------CeEe-ecchhh------cCCCCceEEEec
Confidence            567899999998   899999999988766 68888755322111      1111 113333      224689988775


Q ss_pred             CCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHH-HHHHHHHHHHhcCCCE
Q 024290          157 TGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLME-IKYCTEQFLQDSGLPH  221 (269)
Q Consensus       157 g~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~-sK~~~e~~~~~~gi~~  221 (269)
                      .           -..+..+++.+.+.|++.++.+++...+..   .-+. ....+.+..++.|+++
T Consensus        73 p-----------~~~~~~~~~~~~~~g~~~~vi~s~Gf~e~~---~~~~~~~~~l~~~a~~~girv  124 (129)
T d2csua1          73 P-----------KRFVKDTLIQCGEKGVKGVVIITAGFGETG---EEGKREEKELVEIAHKYGMRI  124 (129)
T ss_dssp             C-----------HHHHHHHHHHHHHHTCCEEEECCCSSTTSC---HHHHHHHHHHHHHHHHHTCEE
T ss_pred             C-----------hHHhHHHHHHHHHcCCCEEEEecccccccc---hhhHHHHHHHHHHHHHcCCEE
Confidence            4           455567889999999998888887544322   1111 1122334456677754

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.23  E-value=4.8e-05  Score=59.22  Aligned_cols=74  Identities=14%  Similarity=0.107  Sum_probs=49.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEE-EeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh----cCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRC-LVRPRPAPADFLRDWGATVVNADLSKPETIPATL----VGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~-~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~----~~~d~vi~~ag  157 (269)
                      +.+|||+||+|.+|...++.+...|.++++ +++++++..+...+.+...+ .|..+++..+.+-    +++|+||++.|
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v-i~~~~~~~~~~~~~~~~~GvDvv~D~vG  109 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA-VNYKTGNVAEQLREACPGGVDVYFDNVG  109 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE-EETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE-eeccchhHHHHHHHHhccCceEEEecCC
Confidence            368999999999999999998889986554 45544443333334454433 3665544333222    47999999998

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.20  E-value=0.00058  Score=49.61  Aligned_cols=30  Identities=20%  Similarity=0.355  Sum_probs=27.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCL  113 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~  113 (269)
                      |||.|.|++|..|+.|++.+.++|+++++.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            579999999999999999999999988754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.20  E-value=0.00045  Score=52.34  Aligned_cols=68  Identities=12%  Similarity=0.146  Sum_probs=43.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCCCCCccccccCCC-EEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY--DVRCLVRPRPAPADFLRDWGA-TVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~~-~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ||+|+|+| .|.+|..+++.|.+.|+  +|++.+++++......+ .+. ....-+   .+  ......+|+||.+..
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~-~~~~~~~~~~---~~--~~~~~~~dlIila~p   71 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-LGIIDEGTTS---IA--KVEDFSPDFVMLSSP   71 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-TTSCSEEESC---GG--GGGGTCCSEEEECSC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH-hhcchhhhhh---hh--hhhccccccccccCC
Confidence            57899998 59999999999999995  78888887544333222 222 111111   11  122236899998874

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.20  E-value=0.00025  Score=52.96  Aligned_cols=65  Identities=17%  Similarity=0.196  Sum_probs=47.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |||.|+| .|.+|+.+++.|+++|++|++.++.+++....... ++.     +  .+...++++++|+||.+..
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~-~~~-----~--~~~~~e~~~~~diIi~~v~   65 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR-TVG-----V--TETSEEDVYSCPVVISAVT   65 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH-HHT-----C--EECCHHHHHTSSEEEECSC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh-ccc-----c--cccHHHHHhhcCeEEEEec
Confidence            5799998 69999999999999999999988765543332211 111     1  1234567788999999875

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.20  E-value=0.00028  Score=53.74  Aligned_cols=73  Identities=18%  Similarity=0.222  Sum_probs=49.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCCCCCccccccCCCEEEEcCCC-CCCcHHHHh-----cCccEEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYD-VRCLVRPRPAPADFLRDWGATVVNADLS-KPETIPATL-----VGVHTVID  154 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~-V~~~~R~~~~~~~~~~~~~~~~i~~Dl~-d~~~l~~~~-----~~~d~vi~  154 (269)
                      .+.+|+|.|+ |++|...++.+...|.. |++.+++++ ..+..++.++..+. |.. +.+.+.+.+     .++|+||.
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~-k~~~ak~lGa~~~i-~~~~~~~~~~~~~~~~~~~g~D~vid  104 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKD-KFARAKEFGATECI-NPQDFSKPIQEVLIEMTDGGVDYSFE  104 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGG-GHHHHHHHTCSEEE-CGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHH-HHHHHHHhCCcEEE-eCCchhhHHHHHHHHHcCCCCcEeee
Confidence            4568999997 68999999999999964 555555443 34445555655543 333 334454443     47999999


Q ss_pred             cCC
Q 024290          155 CAT  157 (269)
Q Consensus       155 ~ag  157 (269)
                      +.|
T Consensus       105 ~~G  107 (176)
T d2fzwa2         105 CIG  107 (176)
T ss_dssp             CSC
T ss_pred             cCC
Confidence            998

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.20  E-value=0.00076  Score=51.57  Aligned_cols=73  Identities=18%  Similarity=0.189  Sum_probs=50.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCC-CCCcHHHHh-----cCccEEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLS-KPETIPATL-----VGVHTVID  154 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~-d~~~l~~~~-----~~~d~vi~  154 (269)
                      .+.+|+|+| .|.||...+..+...|. .|++.++++++ .+..++.++..+. |.. +++.+....     .++|++|.
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r-~~~a~~~Ga~~~i-~~~~~~~~~~~~~~~~~~~G~d~vie  104 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEK-FPKAKALGATDCL-NPRELDKPVQDVITELTAGGVDYSLD  104 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGG-HHHHHHTTCSEEE-CGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHH-HHHHHHhCCCccc-CCccchhhhhhhHhhhhcCCCcEEEE
Confidence            457899998 59999999999999997 56677776544 3445556655443 332 223333333     57999999


Q ss_pred             cCC
Q 024290          155 CAT  157 (269)
Q Consensus       155 ~ag  157 (269)
                      |+|
T Consensus       105 ~~G  107 (174)
T d1e3ia2         105 CAG  107 (174)
T ss_dssp             SSC
T ss_pred             ecc
Confidence            998

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.19  E-value=6.7e-05  Score=56.41  Aligned_cols=66  Identities=11%  Similarity=0.082  Sum_probs=50.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |||.++| +|-+|+++++.|++.|++|++..|+.++..++.++.++.+       ..+..+++++.|+||-+.-
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~-------~~~~~~~~~~~dvIilavk   66 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY-------AMSHQDLIDQVDLVILGIK   66 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB-------CSSHHHHHHTCSEEEECSC
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceee-------echhhhhhhccceeeeecc
Confidence            5799998 6999999999999999999999998665544333334322       2356677788999998864

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.17  E-value=0.00015  Score=55.64  Aligned_cols=74  Identities=19%  Similarity=0.235  Sum_probs=48.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEE-EeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh----cCccEEEEc
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRC-LVRPRPAPADFLRDWGATVVNADLSKPETIPATL----VGVHTVIDC  155 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~-~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~----~~~d~vi~~  155 (269)
                      ..+.+|+|.|+ |.+|...+..+...|+++++ .++++. ..+..++.++..+ .|..+.+..+++.    .++|+||.|
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~-k~~~a~~~Ga~~~-i~~~~~~~~~~i~~~t~gg~D~vid~  103 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVES-RLELAKQLGATHV-INSKTQDPVAAIKEITDGGVNFALES  103 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHH-HHHHHHHHTCSEE-EETTTSCHHHHHHHHTTSCEEEEEEC
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHH-HHHHHHHcCCeEE-EeCCCcCHHHHHHHHcCCCCcEEEEc
Confidence            34678999997 99999999998888976655 455433 3333444554322 3555544333322    358999999


Q ss_pred             CC
Q 024290          156 AT  157 (269)
Q Consensus       156 ag  157 (269)
                      .|
T Consensus       104 ~G  105 (174)
T d1f8fa2         104 TG  105 (174)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.16  E-value=0.00022  Score=54.90  Aligned_cols=97  Identities=13%  Similarity=0.136  Sum_probs=61.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCC--cHHH-H---h--cCccE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPE--TIPA-T---L--VGVHT  151 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~--~l~~-~---~--~~~d~  151 (269)
                      ..+.+|+|+|+ |.+|...++.+...|+ +|+++++++++. +..++.++..+ .|..+.+  +..+ +   .  .++|+
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~~v-i~~~~~~~~~~~~~i~~~~~~~g~Dv  103 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAEEIGADLT-LNRRETSVEERRKAIMDITHGRGADF  103 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHHHTTCSEE-EETTTSCHHHHHHHHHHHTTTSCEEE
T ss_pred             CCCCEEEEECC-Cccchhheecccccccccccccccccccc-cccccccceEE-EeccccchHHHHHHHHHhhCCCCceE
Confidence            34679999996 9999999999999997 799999976543 33455565433 2444432  2222 2   2  36899


Q ss_pred             EEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          152 VIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       152 vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      ||.+.|...          .....++.++..  ++++.++.
T Consensus       104 vid~vG~~~----------~~~~a~~~l~~~--G~iv~~G~  132 (182)
T d1vj0a2         104 ILEATGDSR----------ALLEGSELLRRG--GFYSVAGV  132 (182)
T ss_dssp             EEECSSCTT----------HHHHHHHHEEEE--EEEEECCC
T ss_pred             EeecCCchh----------HHHHHHHHhcCC--CEEEEEee
Confidence            999998421          112233333332  47888874

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.15  E-value=0.00016  Score=55.05  Aligned_cols=74  Identities=27%  Similarity=0.297  Sum_probs=52.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDC  155 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~  155 (269)
                      .+.+|+|+|++|.+|...+..+...| .+|+++++++++ .+.+++.++..+ .|..+.+..++..     +++|++|.+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~-~~~~~~~Ga~~~-i~~~~~~~~~~~~~~~~~~~~d~vid~  104 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEA-VEAAKRAGADYV-INASMQDPLAEIRRITESKGVDAVIDL  104 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHH-HHHHHHHTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhh-HHHHHHcCCcee-eccCCcCHHHHHHHHhhcccchhhhcc
Confidence            45689999999999999999999888 488888886543 233444455432 3455554444443     358999999


Q ss_pred             CC
Q 024290          156 AT  157 (269)
Q Consensus       156 ag  157 (269)
                      +|
T Consensus       105 ~g  106 (170)
T d1jvba2         105 NN  106 (170)
T ss_dssp             CC
T ss_pred             cc
Confidence            98

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.15  E-value=0.00012  Score=56.82  Aligned_cols=74  Identities=22%  Similarity=0.292  Sum_probs=43.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccc---cccCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADF---LRDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~---~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      .++.||.|.||||+.|+.+++.|.+.- .++..+..+.......   ......   .-+....+.....+.++|++|.+.
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Dvvf~al   79 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLIT---QDLPNLVAVKDADFSNVDAVFCCL   79 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTT---SCCCCCBCGGGCCGGGCSEEEECC
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccc---cccccchhhhhhhhcccceeeecc
Confidence            345689999999999999999999874 5776665433222111   010000   011111222233346789999887


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      .
T Consensus        80 p   80 (183)
T d2cvoa1          80 P   80 (183)
T ss_dssp             S
T ss_pred             c
Confidence            5

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.15  E-value=0.00033  Score=53.95  Aligned_cols=73  Identities=18%  Similarity=0.274  Sum_probs=49.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Ccccccc------CCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADFLRD------WGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~~~~------~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      |+|.|.|+ |-.|.+++..|.++|++|.+.+|..+. ..+.+..      .+......++.-.+++.++++++|+||.+.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            68999995 999999999999999999999985321 1111110      111111112223467888899999999876


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      .
T Consensus        80 p   80 (180)
T d1txga2          80 S   80 (180)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.14  E-value=3.9e-05  Score=60.01  Aligned_cols=75  Identities=9%  Similarity=0.123  Sum_probs=51.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc-------CCCEEEEcCCCCCCcHHHHhcCccEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD-------WGATVVNADLSKPETIPATLVGVHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-------~~~~~i~~Dl~d~~~l~~~~~~~d~vi  153 (269)
                      |.|+||.|.| +|..|.+++..|.++|++|++.+|+++........       .++.. .-++.-..++.+++++.|+||
T Consensus         5 ~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~ii   82 (189)
T d1n1ea2           5 LYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEIIL   82 (189)
T ss_dssp             CCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCEE
T ss_pred             ceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEEE
Confidence            5677899999 49999999999999999999999975432211100       01110 112222356788899999999


Q ss_pred             EcCC
Q 024290          154 DCAT  157 (269)
Q Consensus       154 ~~ag  157 (269)
                      .+..
T Consensus        83 iavP   86 (189)
T d1n1ea2          83 FVIP   86 (189)
T ss_dssp             ECSC
T ss_pred             EcCc
Confidence            8764

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.11  E-value=0.004  Score=45.58  Aligned_cols=105  Identities=18%  Similarity=0.122  Sum_probs=69.1

Q ss_pred             CCCEEEEECCC---cHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           82 RPTSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        82 ~~~~vlVtGat---G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      +.|+|.|+|++   +..|..+++.|.+.||+|+.+.-...   +.+   +       ..-..++.++-+.+|.++-+.. 
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~---~i~---G-------~~~~~sl~dlp~~iD~v~i~vp-   83 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE---EVL---G-------RKCYPSVLDIPDKIEVVDLFVK-   83 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS---EET---T-------EECBSSGGGCSSCCSEEEECSC-
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccc---ccC---C-------CcccccccccCccceEEEEEeC-
Confidence            35789999998   78999999999999999888754321   111   1       1112334444456898887653 


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                                ......+++.+.+.|++.+++......            -.+++.+++.|+.++
T Consensus        84 ----------~~~~~~~~~e~~~~g~k~v~~~~G~~~------------ee~~~~a~~~gi~vi  125 (139)
T d2d59a1          84 ----------PKLTMEYVEQAIKKGAKVVWFQYNTYN------------REASKKADEAGLIIV  125 (139)
T ss_dssp             ----------HHHHHHHHHHHHHHTCSEEEECTTCCC------------HHHHHHHHHTTCEEE
T ss_pred             ----------HHHHHHHHHHHHHhCCCEEEEeccccC------------HHHHHHHHHCCCEEE
Confidence                      455567888888889876655333211            245667778887554

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.10  E-value=0.00072  Score=51.52  Aligned_cols=74  Identities=16%  Similarity=0.158  Sum_probs=50.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDC  155 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~  155 (269)
                      .+.+|+|.|+ |++|...+..+...| ..|+++++++++. +...+.+......+-+..+.+.+..     .++|++|.+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~-~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~  105 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKF-AKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV  105 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHH-HHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEec
Confidence            4578999998 779999999999998 4788888875543 3344555554432222234444333     479999999


Q ss_pred             CC
Q 024290          156 AT  157 (269)
Q Consensus       156 ag  157 (269)
                      .|
T Consensus       106 ~G  107 (176)
T d2jhfa2         106 IG  107 (176)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.07  E-value=0.00047  Score=52.64  Aligned_cols=70  Identities=14%  Similarity=0.172  Sum_probs=49.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc----CCCEEEEcCCCCCCcHHHHhcCccEEEEc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD----WGATVVNADLSKPETIPATLVGVHTVIDC  155 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~----~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~  155 (269)
                      ...+|+|+|.| +|+.+++++..|.+.+.+|+++.|+.++..++.+.    ..+..+..|-.       .+..+|+|||+
T Consensus        15 ~~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN~   86 (171)
T d1p77a1          15 LRPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVINA   86 (171)
T ss_dssp             CCTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEEC
T ss_pred             CCCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-------cccccceeeec
Confidence            46788999999 48899999999999889999999986554332221    12333333311       23578999999


Q ss_pred             CC
Q 024290          156 AT  157 (269)
Q Consensus       156 ag  157 (269)
                      ..
T Consensus        87 tp   88 (171)
T d1p77a1          87 TS   88 (171)
T ss_dssp             CC
T ss_pred             cc
Confidence            86

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=97.03  E-value=0.00051  Score=51.99  Aligned_cols=93  Identities=20%  Similarity=0.295  Sum_probs=57.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCeEEEE-eCCCCCC-cccccc-CCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDE-GYDVRCL-VRPRPAP-ADFLRD-WGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~-~R~~~~~-~~~~~~-~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      ..||.|.|++|.+|+.|++.+.+. +.++++. +|..... .+.+.+ .+..  ..++.-.+++..+++.+|+||.... 
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~--~~~~~~~~~~~~~~~~~DViIDFs~-   80 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG--KTGVTVQSSLDAVKDDFDVFIDFTR-   80 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS--CCSCCEESCSTTTTTSCSEEEECSC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccc--cCCceeeccHHHHhcccceEEEecc-
Confidence            468999999999999999999886 5677654 3432211 111100 0000  0111112233456678999998753 


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEE
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVF  189 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~  189 (269)
                                ..++...++.|.+.++ .+|.
T Consensus        81 ----------p~~~~~~~~~a~~~~~-~~Vi  100 (162)
T d1diha1          81 ----------PEGTLNHLAFCRQHGK-GMVI  100 (162)
T ss_dssp             ----------HHHHHHHHHHHHHTTC-EEEE
T ss_pred             ----------HHHHHHHHHHHHhccc-eeEE
Confidence                      4667788899999885 4443

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.01  E-value=0.00033  Score=53.85  Aligned_cols=73  Identities=16%  Similarity=0.074  Sum_probs=44.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCcccccc-CCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRD-WGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~-~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |+||.|.||||++|+.+++.|.+.- .++..+..+.......... ... .-..++. ..+.+.+.+++|+||.+..
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~-~~~~~~~-~~~~~~~~~~~dvvf~a~p   75 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPST-LENSILS-EFDPEKVSKNCDVLFTALP   75 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGG-CCCCBCB-CCCHHHHHHHCSEEEECCS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchh-hcccccc-ccCHhHhccccceEEEccc
Confidence            5789999999999999999998864 5777765443322211000 000 0011121 2233445567999998876

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=97.01  E-value=0.0011  Score=51.02  Aligned_cols=64  Identities=14%  Similarity=0.195  Sum_probs=51.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      .+.+|+|.|.| .|.||+.+++.|..-|.+|++.+|.+.+.              +....+++++++..+|+|+.+...
T Consensus        39 ~l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~--------------~~~~~~~l~ell~~sDiv~~~~pl  102 (181)
T d1qp8a1          39 LIQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEG--------------PWRFTNSLEEALREARAAVCALPL  102 (181)
T ss_dssp             CCTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCS--------------SSCCBSCSHHHHTTCSEEEECCCC
T ss_pred             cccCceEEEec-cccccccceeeeecccccccccccccccc--------------ceeeeechhhhhhccchhhccccc
Confidence            37889999999 59999999999999999999999864322              112234678899999999987753

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.99  E-value=0.00019  Score=54.64  Aligned_cols=66  Identities=14%  Similarity=0.332  Sum_probs=46.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+++|+|.|+ |+.+++++..|.+.|. +|.++.|+.++...+....+...+. ++ +       ....|+|||+..
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~-~~-~-------~~~~DliINaTp   82 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYIN-SL-E-------NQQADILVNVTS   82 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEES-CC-T-------TCCCSEEEECSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhh-cc-c-------ccchhhheeccc
Confidence            4678999995 9999999999999996 8999999866544433333333321 11 1       135799999865

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.99  E-value=0.00034  Score=52.28  Aligned_cols=65  Identities=14%  Similarity=0.251  Sum_probs=47.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |+|.++|+ |.+|.++++.|++.| ++|++.+|++++..++.++.++... -|   .++    +.+.|+||.+.-
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~---~~~----v~~~Div~lavk   66 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-AT---LPE----LHSDDVLILAVK   66 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SS---CCC----CCTTSEEEECSC
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cc---ccc----ccccceEEEecC
Confidence            57999985 999999999999887 9999999987665554444455443 12   222    346799997753

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.97  E-value=0.0011  Score=50.30  Aligned_cols=66  Identities=17%  Similarity=0.294  Sum_probs=42.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |++.||.|.| +|.+|+.+++.|.+. +++++++....++...     ......     ..+...+.+++|+|+.++.
T Consensus         1 M~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~-----~~~~~~-----~~~~~~~~~~~D~Vvi~tp   67 (170)
T d1f06a1           1 MTNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT-----KTPVFD-----VADVDKHADDVDVLFLCMG   67 (170)
T ss_dssp             CCCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS-----SSCEEE-----GGGGGGTTTTCSEEEECSC
T ss_pred             CCcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccccc-----cccccc-----chhhhhhccccceEEEeCC
Confidence            4567899999 699999999999875 5787766543332211     111111     1233344567999998876

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.96  E-value=0.00058  Score=52.82  Aligned_cols=99  Identities=16%  Similarity=0.274  Sum_probs=61.2

Q ss_pred             CCEEEE-ECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc---ccccCCCEEE-EcCCCCCCc----HHHHh----cCc
Q 024290           83 PTSILV-VGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD---FLRDWGATVV-NADLSKPET----IPATL----VGV  149 (269)
Q Consensus        83 ~~~vlV-tGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~---~~~~~~~~~i-~~Dl~d~~~----l~~~~----~~~  149 (269)
                      +.+++| +||+|.+|...++.....|.+|++++|+.++..+   .+++.++..+ .-|-.+..+    +.+..    .++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~v  108 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEA  108 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCE
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCCc
Confidence            455666 5899999999999998899999999987665432   2344455443 222112222    22222    368


Q ss_pred             cEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          150 HTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       150 d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      |+++++.|..           .....++.++..  +++|.++...
T Consensus       109 dvv~D~vg~~-----------~~~~~~~~l~~~--G~~v~~G~~~  140 (189)
T d1gu7a2         109 KLALNCVGGK-----------SSTGIARKLNNN--GLMLTYGGMS  140 (189)
T ss_dssp             EEEEESSCHH-----------HHHHHHHTSCTT--CEEEECCCCS
T ss_pred             eEEEECCCcc-----------hhhhhhhhhcCC--cEEEEECCcc
Confidence            9999998721           112344444333  4899887654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.88  E-value=0.00012  Score=56.90  Aligned_cols=36  Identities=19%  Similarity=0.233  Sum_probs=32.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA  119 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~  119 (269)
                      -++|.|+|+ |.+|+.++..++..|++|++.+++++.
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHG   39 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            367999996 999999999999999999999998653

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.86  E-value=0.0053  Score=45.65  Aligned_cols=93  Identities=20%  Similarity=0.239  Sum_probs=51.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY---DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRP  160 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~---~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~~  160 (269)
                      -+|.|.||||++|..+++.|.+..+   ++..+..+...... .....-.....+..+     ..+.+.|.++.+++   
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~-~~~~~~~~~~~~~~~-----~~~~~~d~~f~~~~---   72 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKS-LKFKDQDITIEETTE-----TAFEGVDIALFSAG---   72 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCE-EEETTEEEEEEECCT-----TTTTTCSEEEECSC---
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccc-ccccCCcccccccch-----hhhhhhhhhhhccC---
Confidence            3799999999999999999988754   34444332221111 111111112222222     22346788888876   


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                              -..+..+...+.+.++ ++|=.|+..
T Consensus        73 --------~~~s~~~~~~~~~~~~-~VIDlSsdf   97 (154)
T d2gz1a1          73 --------SSTSAKYAPYAVKAGV-VVVDNTSYF   97 (154)
T ss_dssp             --------HHHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             --------ccchhhHHhhhccccc-eehhcChhh
Confidence                    1223445555555554 666666643

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.71  E-value=0.0011  Score=51.81  Aligned_cols=67  Identities=16%  Similarity=0.104  Sum_probs=51.4

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ..+.+++|.|.| .|.||+.+++.|..-|.+|++.++.......           .+....+++.+++...|+|+.+..
T Consensus        39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~-----------~~~~~~~~l~~~l~~sDii~~~~p  105 (197)
T d1j4aa1          39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELE-----------KKGYYVDSLDDLYKQADVISLHVP  105 (197)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-----------HTTCBCSCHHHHHHHCSEEEECSC
T ss_pred             ccccCCeEEEec-ccccchhHHHhHhhhcccccccCcccccccc-----------cceeeeccccccccccccccccCC
Confidence            357899999999 7999999999999999999998875332111           112235678888988999887765

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.66  E-value=0.00053  Score=52.47  Aligned_cols=97  Identities=18%  Similarity=0.160  Sum_probs=61.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDC  155 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~  155 (269)
                      .+.+|+|.|+ |.+|...++.+...|. +|+++++++++. +..++.++..+ .|..+.+..+++.     .++|+||.+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~-~~a~~lGa~~~-i~~~~~~~~~~v~~~t~g~G~D~vid~  103 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICV-EAAKFYGATDI-LNYKNGHIEDQVMKLTNGKGVDRVIMA  103 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHH-HHHHHHTCSEE-ECGGGSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhH-HHHHhhCcccc-ccccchhHHHHHHHHhhccCcceEEEc
Confidence            3567999985 9999999999998996 788888875443 33344554332 3555544333332     358999999


Q ss_pred             CCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          156 ATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       156 ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      +|...          .....++.++..  ++++.++-.
T Consensus       104 ~g~~~----------~~~~a~~~~~~~--G~iv~~G~~  129 (174)
T d1jqba2         104 GGGSE----------TLSQAVKMVKPG--GIISNINYH  129 (174)
T ss_dssp             SSCTT----------HHHHHHHHEEEE--EEEEECCCC
T ss_pred             cCCHH----------HHHHHHHHHhcC--CEEEEEeec
Confidence            98421          012233444432  478887743

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.65  E-value=0.0022  Score=50.07  Aligned_cols=66  Identities=11%  Similarity=0.015  Sum_probs=50.2

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ..+.+++|.|.| .|.||+.+++.|..-|.+|++.++.......    ...        +..++.++++.+|+|+.+..
T Consensus        41 ~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~----~~~--------~~~~l~~l~~~~D~v~~~~p  106 (199)
T d1dxya1          41 KELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH----PDF--------DYVSLEDLFKQSDVIDLHVP  106 (199)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCC----TTC--------EECCHHHHHHHCSEEEECCC
T ss_pred             ccccceeeeeee-cccccccccccccccceeeeccCCccchhhh----cch--------hHHHHHHHHHhcccceeeec
Confidence            357889999999 6999999999999999999999986443221    011        23467788888898877665

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.00096  Score=50.29  Aligned_cols=70  Identities=10%  Similarity=-0.008  Sum_probs=53.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      .+.+|+++|+| .|.||+.+++.|...|.+|++...++-+..+..         .|-.....+++++...|++|-+.|..
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~---------~dG~~v~~~~~a~~~adivvtaTGn~   90 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA---------MEGYEVTTMDEACQEGNIFVTTTGCI   90 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH---------HTTCEECCHHHHTTTCSEEEECSSCS
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh---------cCceEeeehhhhhhhccEEEecCCCc
Confidence            47899999999 799999999999999999999998753322211         23333345678888899999988843

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.58  E-value=0.0025  Score=49.47  Aligned_cols=70  Identities=19%  Similarity=0.253  Sum_probs=52.6

Q ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           78 GTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        78 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      +..+.++++.|.| .|.||+.+++.|..-|.+|.+.++.......  ..       .++...+++++++...|+|+.+..
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--~~-------~~~~~~~~l~~ll~~sD~i~~~~p  113 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVE--RA-------LGLQRVSTLQDLLFHSDCVTLHCG  113 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHH--HH-------HTCEECSSHHHHHHHCSEEEECCC
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCcccccch--hh-------hccccccchhhccccCCEEEEeec
Confidence            3458899999999 6999999999999999999999886443211  11       122335678888888999877665

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.58  E-value=0.0034  Score=47.67  Aligned_cols=38  Identities=21%  Similarity=0.445  Sum_probs=33.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD  122 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~  122 (269)
                      |||-|+| .|.+|..+++.|++.||+|.+.+|++++..+
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~   39 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEE   39 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHH
Confidence            5799998 7999999999999999999999998665444

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.52  E-value=0.0029  Score=48.08  Aligned_cols=74  Identities=18%  Similarity=0.191  Sum_probs=51.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCC-cHHHHh-----cCccEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPE-TIPATL-----VGVHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~-~l~~~~-----~~~d~vi  153 (269)
                      ..+.+|+|.|+ |.+|...++.+...|. +|+++++++++. +..++.+++.+. |..+.+ .+.+..     .++|++|
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl-~~a~~lGa~~~i-~~~~~d~~~~~~~~~~~~~G~d~vi  102 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF-PKAIELGATECL-NPKDYDKPIYEVICEKTNGGVDYAV  102 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHTTCSEEE-CGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHH-HHHHHcCCcEEE-cCCCchhHHHHHHHHhcCCCCcEEE
Confidence            45678999995 9999999999999996 688888865543 334555655442 444333 233332     4689999


Q ss_pred             EcCC
Q 024290          154 DCAT  157 (269)
Q Consensus       154 ~~ag  157 (269)
                      .++|
T Consensus       103 d~~g  106 (174)
T d1p0fa2         103 ECAG  106 (174)
T ss_dssp             ECSC
T ss_pred             EcCC
Confidence            9988

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.51  E-value=0.0023  Score=45.69  Aligned_cols=35  Identities=23%  Similarity=0.426  Sum_probs=31.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      .++++|.|| |++|-.++..|.++|.+|+++.+.+.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            478999995 99999999999999999999999754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.46  E-value=0.0026  Score=48.70  Aligned_cols=73  Identities=23%  Similarity=0.276  Sum_probs=50.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCC----------------------C
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKP----------------------E  140 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~----------------------~  140 (269)
                      .-+|+|.|| |-.|.+-++.....|.+|.+++.+.+...+ ++..+..++..+..+.                      +
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~-l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQ-VESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHH-HHHTTCEECCC-----------------------CCHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHH-HHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            458999995 999999999999999999999998765433 4444444544332221                      2


Q ss_pred             cHHHHhcCccEEEEcCC
Q 024290          141 TIPATLVGVHTVIDCAT  157 (269)
Q Consensus       141 ~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+.+.+.|+||-.+-
T Consensus       107 ~l~~~l~~aDlVI~tal  123 (183)
T d1l7da1         107 AVLKELVKTDIAITTAL  123 (183)
T ss_dssp             HHHHHHTTCSEEEECCC
T ss_pred             HHHHHHHhhhhheeeee
Confidence            34455678899998775

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.45  E-value=0.0049  Score=47.46  Aligned_cols=94  Identities=17%  Similarity=0.133  Sum_probs=62.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      .+.+++|.|.| .|.||+.+++.|..-|.+|+..++.......            .....+.+++++...|+|+.+....
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~------------~~~~~~~l~ell~~sDii~i~~plt  107 (188)
T d1sc6a1          41 EARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLG------------NATQVQHLSDLLNMSDVVSLHVPEN  107 (188)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCT------------TCEECSCHHHHHHHCSEEEECCCSS
T ss_pred             cccceEEEEee-cccchhhhhhhcccccceEeeccccccchhh------------hhhhhhhHHHHHhhccceeecccCC
Confidence            47789999998 7999999999999999999999885432211            1112357888888899998777533


Q ss_pred             CC-ccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          160 PE-EPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       160 ~~-~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                      +. ..+++      ...++.+++ + ..+|++|-..
T Consensus       108 ~~T~~li~------~~~l~~mk~-~-a~lIN~aRG~  135 (188)
T d1sc6a1         108 PSTKNMMG------AKEISLMKP-G-SLLINASRGT  135 (188)
T ss_dssp             TTTTTCBC------HHHHHHSCT-T-EEEEECSCSS
T ss_pred             cchhhhcc------HHHHhhCCC-C-CEEEEcCcHH
Confidence            22 22222      235555533 1 2567766543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.45  E-value=0.0026  Score=44.91  Aligned_cols=35  Identities=26%  Similarity=0.404  Sum_probs=31.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      +++++|+|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            478999995 99999999999999999999998653

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.35  E-value=0.0033  Score=44.92  Aligned_cols=35  Identities=17%  Similarity=0.303  Sum_probs=31.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      ..++|+|.|| |++|..++..|.+.|.+|+++.+.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            4578999985 9999999999999999999998864

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.31  E-value=0.0028  Score=47.52  Aligned_cols=73  Identities=22%  Similarity=0.319  Sum_probs=50.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH---hcCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---LVGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~---~~~~d~vi~~ag  157 (269)
                      .+.+|+|.|+ |.+|...++.+...|++|+++++++++. +..++.++..+ .|..+.+..+++   ..+.|.+|.+++
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~-~~a~~~Ga~~~-i~~~~~~~~~~~~~~~~g~~~~i~~~~  102 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKL-ELARKLGASLT-VNARQEDPVEAIQRDIGGAHGVLVTAV  102 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTTCSEE-EETTTSCHHHHHHHHHSSEEEEEECCS
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHH-HhhhccCcccc-ccccchhHHHHHHHhhcCCcccccccc
Confidence            4678999986 9999999999999999999999975543 33445565433 355555444433   345666666665

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.31  E-value=0.00041  Score=52.59  Aligned_cols=74  Identities=15%  Similarity=0.228  Sum_probs=55.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccc--CCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRD--WGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      ...-+|+|.|+ |-.|..-++.+...|.+|++++.+.+...+.-..  ..++..   ..+.+.+.+.+.++|+||.++-.
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~aali  105 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGAVLV  105 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEECCCC
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEeeec
Confidence            34578999995 9999999999999999999999986544321111  123333   44567888999999999998863

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.29  E-value=0.0072  Score=46.10  Aligned_cols=97  Identities=12%  Similarity=0.213  Sum_probs=56.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCc-cccccCCCEEE----------EcCCCCCCcHHHHhcCcc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPA-DFLRDWGATVV----------NADLSKPETIPATLVGVH  150 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~-~~~~~~~~~~i----------~~Dl~d~~~l~~~~~~~d  150 (269)
                      |-||.|.| .|.||+.+++.+.+++ .+|+++....+... ..+...+....          ...+.-...+..++.++|
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD   79 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD   79 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence            45899998 7999999999999875 78888755332211 11111111110          012222345666667899


Q ss_pred             EEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecc
Q 024290          151 TVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSI  192 (269)
Q Consensus       151 ~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS  192 (269)
                      +||.|.|..          .. ..-.+...+.| +|+|+.+.
T Consensus        80 iViecTG~f----------~~-~e~a~~hl~~G-~KvIi~~~  109 (178)
T d1b7go1          80 IVVDTTPNG----------VG-AQYKPIYLQLQ-RNAIFQGG  109 (178)
T ss_dssp             EEEECCSTT----------HH-HHHHHHHHHTT-CEEEECTT
T ss_pred             EEEECCCCc----------CC-HHHHHHHHHcC-CEEEEECC
Confidence            999999832          11 12233444567 57777554

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.27  E-value=0.0034  Score=44.79  Aligned_cols=35  Identities=17%  Similarity=0.293  Sum_probs=31.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      +++++|+|| |+||-.++..|.+.|.+|+++.+.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            479999995 99999999999999999999998653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0087  Score=45.22  Aligned_cols=41  Identities=17%  Similarity=0.160  Sum_probs=36.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP  120 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~  120 (269)
                      ++.+|+|+|+|.+.-+|+-++..|+++|..|+.+.......
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l   76 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL   76 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccH
Confidence            58899999999999999999999999999999988765443

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.22  E-value=0.002  Score=48.80  Aligned_cols=71  Identities=21%  Similarity=0.241  Sum_probs=46.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-----cCccEEEEcC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-----VGVHTVIDCA  156 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-----~~~d~vi~~a  156 (269)
                      +.+|+|.|+ |.+|...++.+...|. .|+++++++++ .+..++.+...+ .|.. .+.++..+     .++|+||.++
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k-~~~~~~~ga~~~-i~~~-~~~~~~~~~~~~~~g~d~vid~~  108 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEK-LKLAERLGADHV-VDAR-RDPVKQVMELTRGRGVNVAMDFV  108 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHH-HHHHHHTTCSEE-EETT-SCHHHHHHHHTTTCCEEEEEESS
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHH-HHHHhhccccee-ecCc-ccHHHHHHHhhCCCCceEEEEec
Confidence            568999985 9999999998888885 66666776543 333444454322 2333 23333333     3689999999


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      |
T Consensus       109 g  109 (172)
T d1h2ba2         109 G  109 (172)
T ss_dssp             C
T ss_pred             C
Confidence            8

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.21  E-value=0.0034  Score=44.48  Aligned_cols=34  Identities=21%  Similarity=0.320  Sum_probs=31.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      .++|+|.|| |++|-.++..|.+.|.+|+++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            478999995 9999999999999999999999864

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.20  E-value=0.0055  Score=46.12  Aligned_cols=40  Identities=20%  Similarity=0.220  Sum_probs=35.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA  119 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~  119 (269)
                      ++.+|+|+|+|.+.-+|+-++..|.++|+.|+.+......
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~   73 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKN   73 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccch
Confidence            5789999999999999999999999999999988765433

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.20  E-value=0.004  Score=43.93  Aligned_cols=35  Identities=23%  Similarity=0.263  Sum_probs=31.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      +++++|+|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            478999995 99999999999999999999999753

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.19  E-value=0.0011  Score=51.49  Aligned_cols=34  Identities=18%  Similarity=0.125  Sum_probs=28.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA  119 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~  119 (269)
                      |||.|+| .|++|..++..| ++|++|++++-++..
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~   34 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSK   34 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHH
Confidence            6799997 799999998655 679999999987543

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.16  E-value=0.013  Score=44.32  Aligned_cols=98  Identities=18%  Similarity=0.258  Sum_probs=57.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCC-CCCCccccccCCCEEEEcC-----------CCCCCcHHHHhcCc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRP-RPAPADFLRDWGATVVNAD-----------LSKPETIPATLVGV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~-~~~~~~~~~~~~~~~i~~D-----------l~d~~~l~~~~~~~  149 (269)
                      .+||.|-| -|.||+.+++.+.++. .+|+.+... +......+...+...+..+           +.....+..+++++
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   80 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKV   80 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccC
Confidence            46899999 6999999999998765 677766532 2211112222233333221           22234566667799


Q ss_pred             cEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          150 HTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       150 d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      |+|+-|.|...          . ..-++.-.++|+ +.|++|..
T Consensus        81 DvViEcTG~f~----------~-~~~~~~hl~~G~-k~Vi~s~~  112 (172)
T d2czca2          81 DIIVDATPGGI----------G-AKNKPLYEKAGV-KAIFQGGE  112 (172)
T ss_dssp             SEEEECCSTTH----------H-HHHHHHHHHHTC-EEEECTTS
T ss_pred             CEEEECCCCCC----------C-HHHHHHHHHcCC-CEEEECCC
Confidence            99999999331          1 112233345686 66666653

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.13  E-value=0.0049  Score=43.68  Aligned_cols=36  Identities=25%  Similarity=0.297  Sum_probs=32.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      .+++++|+|| |+||-.++..|.+.|.+|+++.+.+.
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            3578999995 99999999999999999999998753

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0045  Score=44.29  Aligned_cols=34  Identities=21%  Similarity=0.345  Sum_probs=31.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      +|+++|+|| |++|-.++..|.+.|.+|+++.|.+
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            478999995 9999999999999999999999975

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.09  E-value=0.0077  Score=46.25  Aligned_cols=70  Identities=14%  Similarity=0.098  Sum_probs=52.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ..+.++++.|.| .|.||+.+++.|..-|.+|...++....... ...       ..+....++.++++..|+|+.+..
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-~~~-------~~~~~~~~l~~~l~~sD~v~~~~p  109 (188)
T d2naca1          40 YDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESV-EKE-------LNLTWHATREDMYPVCDVVTLNCP  109 (188)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHH-HHH-------HTCEECSSHHHHGGGCSEEEECSC
T ss_pred             eeccccceeecc-ccccchhhhhhhhccCceEEEEeeccccccc-ccc-------ccccccCCHHHHHHhccchhhccc
Confidence            357889999999 6999999999999999999999986432211 111       123345678888999999977665

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.06  E-value=0.004  Score=44.33  Aligned_cols=34  Identities=21%  Similarity=0.523  Sum_probs=30.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      .++++|.|| |++|-.++..|.+.|++|+++.|.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            368999995 9999999999999999999999864

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=96.05  E-value=0.032  Score=40.34  Aligned_cols=107  Identities=14%  Similarity=0.069  Sum_probs=67.8

Q ss_pred             CCCEEEEECCC---cHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           82 RPTSILVVGAT---GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        82 ~~~~vlVtGat---G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      ..|+|.|+|++   +..|..+.+.|.+.||+++.+.-++.. .+.          ....-..++.++-+.+|.++-+.. 
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~-~~i----------~g~~~~~~l~~i~~~iD~v~v~~p-   79 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG-EEL----------FGEEAVASLLDLKEPVDILDVFRP-   79 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT-SEE----------TTEECBSSGGGCCSCCSEEEECSC-
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecccc-cee----------eceecccchhhccCCCceEEEecc-
Confidence            45789999998   679999999999999999877543211 110          011112233333346898887753 


Q ss_pred             CCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccCCCCCCCCcHHHHHHHHHHHHHhcCCCEE
Q 024290          159 RPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHV  222 (269)
Q Consensus       159 ~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~  222 (269)
                                -.....+++.|.+.|++.+++ .+...           -.++.+++++.|++++
T Consensus        80 ----------~~~v~~~v~~~~~~g~k~i~~-q~G~~-----------~~e~~~~a~~~Gi~vV  121 (136)
T d1iuka_          80 ----------PSALMDHLPEVLALRPGLVWL-QSGIR-----------HPEFEKALKEAGIPVV  121 (136)
T ss_dssp             ----------HHHHTTTHHHHHHHCCSCEEE-CTTCC-----------CHHHHHHHHHTTCCEE
T ss_pred             ----------HHHHHHHHHHHHhhCCCeEEE-ecCcc-----------CHHHHHHHHHcCCEEE
Confidence                      233445777777888866544 32211           1245677888999876

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.04  E-value=0.0039  Score=43.85  Aligned_cols=35  Identities=23%  Similarity=0.341  Sum_probs=31.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      +++++|.|| |++|-.++..|.+.|.+|+++.+.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            478999995 99999999999999999999998643

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.03  E-value=0.0043  Score=44.27  Aligned_cols=33  Identities=33%  Similarity=0.422  Sum_probs=30.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~  116 (269)
                      +++++|+|| |+||..++..|.+.|.+|+++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            468999995 999999999999999999999875

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.99  E-value=0.0068  Score=46.80  Aligned_cols=71  Identities=14%  Similarity=0.180  Sum_probs=52.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATG  158 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~  158 (269)
                      ..+.++++.|.| .|.||+.+++.|..-|.+|...++..........        ......+++.+++...|+|+.+...
T Consensus        43 ~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------~~~~~~~~l~~ll~~sD~v~l~~pl  113 (191)
T d1gdha1          43 EKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS--------YQATFHDSLDSLLSVSQFFSLNAPS  113 (191)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH--------HTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             ceecccceEEee-cccchHHHHHHHHhhccccccccccccccchhhc--------ccccccCCHHHHHhhCCeEEecCCC
Confidence            357889999999 6999999999999999999999876443222111        1122346788888889999776653

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.97  E-value=0.0056  Score=44.29  Aligned_cols=36  Identities=19%  Similarity=0.380  Sum_probs=32.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      ..++|+|+|| |++|-.++..|.+.|.+|+++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            3579999995 99999999999999999999999654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.93  E-value=0.0057  Score=46.32  Aligned_cols=81  Identities=12%  Similarity=0.103  Sum_probs=52.5

Q ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCC-CEEEEcCC--CCCCcHHHHhcCccEEEE
Q 024290           78 GTPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWG-ATVVNADL--SKPETIPATLVGVHTVID  154 (269)
Q Consensus        78 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~-~~~i~~Dl--~d~~~l~~~~~~~d~vi~  154 (269)
                      +.++.+|+++|+|-+.-+|+-++..|+++|..|+.+..+............ ......|+  ...+.+++....+|+||.
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIs  103 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT  103 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEE
Confidence            346899999999999999999999999999999887654211100000000 00112222  123446666667899998


Q ss_pred             cCCC
Q 024290          155 CATG  158 (269)
Q Consensus       155 ~ag~  158 (269)
                      .+|.
T Consensus       104 avG~  107 (171)
T d1edza1         104 GVPS  107 (171)
T ss_dssp             CCCC
T ss_pred             ccCC
Confidence            8874

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.92  E-value=0.0039  Score=46.63  Aligned_cols=73  Identities=22%  Similarity=0.284  Sum_probs=50.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCC---cHHHHhcCccEEEEcCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPE---TIPATLVGVHTVIDCAT  157 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~---~l~~~~~~~d~vi~~ag  157 (269)
                      .+.+|+|.|+ |.+|...+..+...|++|+++++++++. +..++.++..+. |..+.+   .+.+...+.|.+|.+++
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~-~~~k~~Ga~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~  102 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL-ELAKELGADLVV-NPLKEDAAKFMKEKVGGVHAAVVTAV  102 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHTTCSEEE-CTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHh-hhhhhcCcceec-ccccchhhhhcccccCCCceEEeecC
Confidence            3568999875 9999999999999999999999876543 334556766554 343332   23333456777777765

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.88  E-value=0.0082  Score=46.37  Aligned_cols=75  Identities=16%  Similarity=0.053  Sum_probs=50.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH---h--cCccEEEEc
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT---L--VGVHTVIDC  155 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~---~--~~~d~vi~~  155 (269)
                      .+.+|+|.|+ |.+|...+..+...|. +|+++++++++. +..++.++..+. |..+.+...+.   .  .++|++|.+
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl-~~a~~~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~  101 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL-AHAKAQGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDA  101 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhh-HhhhhccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEEC
Confidence            4568999985 9999988888878886 777887765433 344556776543 44443333322   2  368999999


Q ss_pred             CCCC
Q 024290          156 ATGR  159 (269)
Q Consensus       156 ag~~  159 (269)
                      .|..
T Consensus       102 vG~~  105 (195)
T d1kola2         102 VGFE  105 (195)
T ss_dssp             CCTT
T ss_pred             cccc
Confidence            9843

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.87  E-value=0.017  Score=41.87  Aligned_cols=75  Identities=17%  Similarity=0.210  Sum_probs=46.8

Q ss_pred             EEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHH-hcCccEEEEcCCCCCCc
Q 024290           85 SILVVGATGTLGRQIVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPAT-LVGVHTVIDCATGRPEE  162 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~-~~~~d~vi~~ag~~~~~  162 (269)
                      ||.|.|++|..|+.+++.+.+. ++++.+..-..+                      .+... ..++|+||....+    
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~----------------------~~~~~~~~~~DvvIDFS~p----   54 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD----------------------PLSLLTDGNTEVVIDFTHP----   54 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC----------------------CTHHHHTTTCSEEEECCCT----
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC----------------------chhhhccccCCEEEEcccH----
Confidence            6899999999999999988764 577765432111                      11111 1357888876542    


Q ss_pred             cchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          163 PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       163 ~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                             ..+...++.|.+.|+ .+|. +|.+
T Consensus        55 -------~~~~~~~~~~~~~~~-~~Vi-GTTG   77 (135)
T d1yl7a1          55 -------DVVMGNLEFLIDNGI-HAVV-GTTG   77 (135)
T ss_dssp             -------TTHHHHHHHHHHTTC-EEEE-CCCC
T ss_pred             -------HHHHHHHHHHHhcCC-CEEE-eccc
Confidence                   234567777777775 3333 4444

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.87  E-value=0.0069  Score=47.68  Aligned_cols=34  Identities=26%  Similarity=0.466  Sum_probs=31.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      .+||+|+|| |..|...+..|.++|++|+++.|..
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            468999995 9999999999999999999999863

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.86  E-value=0.01  Score=44.98  Aligned_cols=74  Identities=14%  Similarity=0.113  Sum_probs=51.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCccccccCCCEEEEcCCCCCCc-HHHH---h--cCccEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFLRDWGATVVNADLSKPET-IPAT---L--VGVHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~-l~~~---~--~~~d~vi  153 (269)
                      ..+.+|+|+|+ |.+|...+..+...| .+|+++++++++.+ ..++.++..+. |..+.+. .+..   .  .++|++|
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~-~Ak~~GA~~~i-n~~~~~~~~~~~~~~~~g~G~d~vi  104 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFE-KAMAVGATECI-SPKDSTKPISEVLSEMTGNNVGYTF  104 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHHTCSEEE-CGGGCSSCHHHHHHHHHTSCCCEEE
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHH-HHHhcCCcEEE-CccccchHHHHHHHHhccccceEEE
Confidence            34668999985 999999999999999 58999999766543 33444554433 4444332 2222   2  4799999


Q ss_pred             EcCC
Q 024290          154 DCAT  157 (269)
Q Consensus       154 ~~ag  157 (269)
                      .+.|
T Consensus       105 ~~~g  108 (176)
T d1d1ta2         105 EVIG  108 (176)
T ss_dssp             ECSC
T ss_pred             EeCC
Confidence            9987

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.80  E-value=0.015  Score=43.57  Aligned_cols=74  Identities=19%  Similarity=0.224  Sum_probs=48.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccccCCCEEEEcCCCCCC-cHHHHh-----cCccEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLRDWGATVVNADLSKPE-TIPATL-----VGVHTVI  153 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~-~l~~~~-----~~~d~vi  153 (269)
                      ..+.+|+|+|+ |.+|...+..+...|. +|+++++++++. +..++.++..+. |..+.+ ...+..     .++|++|
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl-~~a~~~GAd~~i-n~~~~~~~~~~~~~~~~~~G~d~vi  103 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF-EKAKVFGATDFV-NPNDHSEPISQVLSKMTNGGVDFSL  103 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCCEEE-CGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHH-HHHHHcCCcEEE-cCCCcchhHHHHHHhhccCCcceee
Confidence            34678999986 6688888878887775 688888765543 334556654432 444433 223332     4799999


Q ss_pred             EcCC
Q 024290          154 DCAT  157 (269)
Q Consensus       154 ~~ag  157 (269)
                      .+.|
T Consensus       104 d~~G  107 (175)
T d1cdoa2         104 ECVG  107 (175)
T ss_dssp             ECSC
T ss_pred             eecC
Confidence            9998

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.80  E-value=0.0029  Score=41.46  Aligned_cols=52  Identities=21%  Similarity=0.282  Sum_probs=39.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSK  138 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d  138 (269)
                      +|+|.|.| +|.+|+-++.....-|++|++++-+++......   ...++..++.+
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~~~---a~dvIT~e~E~   52 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPF---QQSVITAEIER   52 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGGGSCG---GGSEEEESSSC
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCccccc---ccceEEEeecc
Confidence            47899999 599999999999999999999987654433211   23566666665

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.75  E-value=0.0063  Score=47.39  Aligned_cols=69  Identities=22%  Similarity=0.287  Sum_probs=49.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-cCccEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-VGVHTVIDCATG  158 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-~~~d~vi~~ag~  158 (269)
                      ++.+++|+|-| -|.+|+++++.|.+.|.+|++.+.+...... ....+.+.+     +.   .+++ .++|+++-||..
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~-~~~~g~~~~-----~~---~~~~~~~~DI~iPcA~~   93 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH-AVALGHTAV-----AL---EDVLSTPCDVFAPCAMG   93 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHTTCEEC-----CG---GGGGGCCCSEEEECSCS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH-HHhhccccc-----Cc---cccccccceeeeccccc
Confidence            58899999998 7999999999999999999988876443222 122233322     12   2334 378999998863

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.74  E-value=0.0044  Score=47.56  Aligned_cols=67  Identities=15%  Similarity=0.125  Sum_probs=49.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .+.++++.|.| .|.||+.+++.+..-|.+|++.++.......  ...++        ...+++++++.+|+|+.+..
T Consensus        41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~--~~~~~--------~~~~l~ell~~sDiv~~~~P  107 (184)
T d1ygya1          41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARA--AQLGI--------ELLSLDDLLARADFISVHLP  107 (184)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHH--HHHTC--------EECCHHHHHHHCSEEEECCC
T ss_pred             cccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHH--hhcCc--------eeccHHHHHhhCCEEEEcCC
Confidence            57789999999 6999999999999999999999876432211  11111        23467788888999987765

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.70  E-value=0.018  Score=43.74  Aligned_cols=36  Identities=28%  Similarity=0.343  Sum_probs=32.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      ..+|+|+|+|| |..|...+..|.++||+|+++.+.+
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            45789999995 9999999999999999999999965

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.65  E-value=0.0056  Score=43.65  Aligned_cols=35  Identities=23%  Similarity=0.329  Sum_probs=31.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      +++++|+|| |+||-.++..|.+.|.+|+++.|.+.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            478999995 99999999999999999999999754

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.62  E-value=0.005  Score=45.43  Aligned_cols=35  Identities=17%  Similarity=0.419  Sum_probs=32.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR  115 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R  115 (269)
                      .+++|+|||+|| |.+|..-++.|++.|.+|++++-
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            478999999997 99999999999999999999964

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=95.55  E-value=0.013  Score=41.89  Aligned_cols=92  Identities=15%  Similarity=0.232  Sum_probs=60.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHH-CCCeEEEEeCCCCCC-ccccccCCCEEEEcCCCCCCcHHHHhc-CccEEEEcCCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALD-EGYDVRCLVRPRPAP-ADFLRDWGATVVNADLSKPETIPATLV-GVHTVIDCATGRP  160 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~-~G~~V~~~~R~~~~~-~~~~~~~~~~~i~~Dl~d~~~l~~~~~-~~d~vi~~ag~~~  160 (269)
                      .+|+|.|| |.+|+++++.+.. .||+++++..+.+.. -...  .++.++.     .+++.++.. .+++++.+..   
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I--~Gi~V~~-----~~~l~~~~~~~i~iai~~i~---   72 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRPV--RGGVIEH-----VDLLPQRVPGRIEIALLTVP---   72 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEE--TTEEEEE-----GGGHHHHSTTTCCEEEECSC---
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEE--CCEEEec-----HHHHHHHHhhcccEEEEeCC---
Confidence            37999995 9999999997753 578988876644332 2211  2455442     345666654 4676666653   


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEecccC
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN  194 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~  194 (269)
                              -.....+++.+.+.|++.+..++...
T Consensus        73 --------~~~~~~I~d~l~~~gIk~I~~f~~~~   98 (126)
T d2dt5a2          73 --------REAAQKAADLLVAAGIKGILNFAPVV   98 (126)
T ss_dssp             --------HHHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred             --------HHHHHHHHHHHHHcCCCEEeecCcee
Confidence                    23445688889999999888876543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.55  E-value=0.0069  Score=45.97  Aligned_cols=35  Identities=20%  Similarity=0.298  Sum_probs=31.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRP  118 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~  118 (269)
                      +|||+|+|| |..|...|..|.++|+ +|+++.|.+.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            579999995 9999999999999998 5999998653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.47  E-value=0.009  Score=42.70  Aligned_cols=35  Identities=17%  Similarity=0.300  Sum_probs=31.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      +++++|.|| |+||-.++..|.+.|.+|+++.+.+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            478999995 99999999999999999999998653

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.46  E-value=0.013  Score=41.13  Aligned_cols=36  Identities=22%  Similarity=0.237  Sum_probs=32.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      .+++++|+|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            3589999995 99999999999999999999999753

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.38  E-value=0.0086  Score=47.80  Aligned_cols=34  Identities=21%  Similarity=0.294  Sum_probs=30.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      +|||+|+|| |.-|...+..|.++|++|+++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            489999995 9999999999999999999998754

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.32  E-value=0.012  Score=46.64  Aligned_cols=35  Identities=29%  Similarity=0.295  Sum_probs=31.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      .+||+|+|| |..|..++..|.++|++|+++.|+++
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            468999995 99999999999999999999998643

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.22  E-value=0.0086  Score=44.75  Aligned_cols=70  Identities=13%  Similarity=0.075  Sum_probs=53.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGR  159 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag~~  159 (269)
                      .+.+|+++|.| -|.+|+-+++.|...|.+|+++..+|-...+. ...+.+        ...++++++..|++|-+.|..
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA-~mdGf~--------v~~~~~a~~~aDi~vTaTGn~   89 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQA-VMEGFN--------VVTLDEIVDKGDFFITCTGNV   89 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH-HTTTCE--------ECCHHHHTTTCSEEEECCSSS
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHH-HhcCCc--------cCchhHccccCcEEEEcCCCC
Confidence            37789999999 69999999999999999999998875332221 111332        345678888899999988844

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=95.17  E-value=0.012  Score=43.53  Aligned_cols=35  Identities=20%  Similarity=0.223  Sum_probs=30.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPR  117 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~  117 (269)
                      .+|||+|+|| |++|-.++..|.+.+  .+|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3689999995 999999999999987  4788888764

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.12  E-value=0.013  Score=48.62  Aligned_cols=35  Identities=31%  Similarity=0.481  Sum_probs=31.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      ++|+|+|+|| |.-|..+|..|.++|++|.++.+++
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            3689999995 9999999999999999999999864

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.09  E-value=0.0084  Score=47.63  Aligned_cols=70  Identities=21%  Similarity=0.335  Sum_probs=49.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh-cCccEEEEcCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL-VGVHTVIDCATG  158 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~-~~~d~vi~~ag~  158 (269)
                      ++.+++|+|-| -|.+|+++++.|.+.|..|++.+.+...........+.+.+     +++   +++ .++|+++-||..
T Consensus        36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-----~~~---~~~~~~cDIl~PcA~~  106 (230)
T d1leha1          36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-----APN---AIYGVTCDIFAPCALG  106 (230)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-----CGG---GTTTCCCSEEEECSCS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-----CCc---ccccccccEecccccc
Confidence            58899999999 69999999999999999999988765443333333333322     222   222 368999999863

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.08  E-value=0.11  Score=41.10  Aligned_cols=98  Identities=16%  Similarity=0.205  Sum_probs=60.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccc------------------------cCCCEEEEcC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADFLR------------------------DWGATVVNAD  135 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~------------------------~~~~~~i~~D  135 (269)
                      +..++|+|.| .|++|.+++..|+..|. ++++++.+.-+...+-+                        ...+.+...+
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            5567999999 59999999999999996 77777764321111000                        0134444433


Q ss_pred             CC-CCCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEe
Q 024290          136 LS-KPETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFY  190 (269)
Q Consensus       136 l~-d~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~  190 (269)
                      .. +.+.....+...|++|.+..          |......+-++|.+.++. +|+.
T Consensus       107 ~~~~~~~~~~~~~~~divid~~d----------~~~~~~~in~~~~~~~ip-~i~g  151 (247)
T d1jw9b_         107 ALLDDAELAALIAEHDLVLDCTD----------NVAVRNQLNAGCFAAKVP-LVSG  151 (247)
T ss_dssp             SCCCHHHHHHHHHTSSEEEECCS----------SHHHHHHHHHHHHHHTCC-EEEE
T ss_pred             hhhhhccccccccccceeeeccc----------hhhhhhhHHHHHHHhCCC-cccc
Confidence            32 23344555677899988763          334444566677777763 4443

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=95.02  E-value=0.062  Score=40.34  Aligned_cols=98  Identities=22%  Similarity=0.318  Sum_probs=56.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCCCCC-ccccccCCCEEEEc-----------CCCCCCcHHHHhcCc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG-YDVRCLVRPRPAP-ADFLRDWGATVVNA-----------DLSKPETIPATLVGV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~-~~~~~~~~~~~i~~-----------Dl~d~~~l~~~~~~~  149 (269)
                      |++|.|-| -|.||+.+.+.+.+++ .+|+++....+.. ...+...+......           .+.-...+..+++++
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v   79 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA   79 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence            57899998 7999999999998876 6777665432221 11111112222211           111123455566789


Q ss_pred             cEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          150 HTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       150 d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      |+||-|.|...          .... ++.-.++|+ ++|+.++.
T Consensus        80 DvViEcTG~f~----------~~~~-~~~hl~~G~-K~vi~~~~  111 (171)
T d1cf2o1          80 DIVIDCTPEGI----------GAKN-LKMYKEKGI-KAIFQGGE  111 (171)
T ss_dssp             SEEEECCSTTH----------HHHH-HHHHHHTTC-EEEECTTS
T ss_pred             CEEEEccCCCC----------CHHH-HHHHHHcCC-CEEEECCC
Confidence            99999999431          1122 223345675 67776653

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.98  E-value=0.012  Score=47.07  Aligned_cols=31  Identities=19%  Similarity=0.306  Sum_probs=29.0

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      |+|+|| |.+|..++.+|+++|++|+++.+..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            999995 9999999999999999999999864

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.93  E-value=0.025  Score=49.02  Aligned_cols=74  Identities=14%  Similarity=0.244  Sum_probs=50.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCccc----c----------------------ccCCCEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPADF----L----------------------RDWGATVVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~----~----------------------~~~~~~~i~  133 (269)
                      +...||||+|+ |++|..+++.|+..|. ++++++.+.=....+    +                      ...++..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            34568999996 8899999999999996 888888753111100    0                      011355555


Q ss_pred             cCCCCCCcHHHHhcCccEEEEcCC
Q 024290          134 ADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus       134 ~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      .++.+..  ..++++.|+||.+..
T Consensus       114 ~~i~~~~--~~~~~~~DlVi~~~D  135 (426)
T d1yovb1         114 NKIQDFN--DTFYRQFHIIVCGLD  135 (426)
T ss_dssp             SCGGGBC--HHHHTTCSEEEECCS
T ss_pred             ccccchH--HHHHHhcchheeccC
Confidence            5665433  467889999998764

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.72  E-value=0.0079  Score=41.66  Aligned_cols=39  Identities=18%  Similarity=0.071  Sum_probs=32.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      ....+|+|+|.| +|.-|..++..|...+.+|+.+.|+..
T Consensus        28 ~~f~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          28 ELFVGESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGTTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hhcCCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            357899999999 589999999999988877777776543

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.57  E-value=0.018  Score=46.70  Aligned_cols=36  Identities=25%  Similarity=0.377  Sum_probs=32.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      ...|+|+|+|| |..|...+..|.++|++|+++.+++
T Consensus        28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            34579999995 9999999999999999999998864

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=94.57  E-value=0.079  Score=39.04  Aligned_cols=66  Identities=12%  Similarity=0.223  Sum_probs=41.7

Q ss_pred             CEEEEECCCcHHHHH-HHHHHHHC-CCeEEEEe-CCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQ-IVRRALDE-GYDVRCLV-RPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~-l~~~Ll~~-G~~V~~~~-R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      ++|.|+| +|.+|+. ....|... +++++++. ++.++..+..+..++.     +  .+.++.+++++|+|+.+..
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~-----~--~~~~~~l~~~~D~V~I~tp   70 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIP-----Y--ADSLSSLAASCDAVFVHSS   70 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCC-----B--CSSHHHHHTTCSEEEECSC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccccc-----c--cccchhhhhhccccccccc
Confidence            5799999 5899975 46666554 67877654 5554444433333332     2  3445666788999987764

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=94.48  E-value=0.018  Score=45.76  Aligned_cols=33  Identities=24%  Similarity=0.343  Sum_probs=30.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      |+|+|+|| |.-|...+..|.++|++|+++.+++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            57999996 9999999999999999999998864

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=94.42  E-value=0.023  Score=42.28  Aligned_cols=68  Identities=12%  Similarity=0.167  Sum_probs=39.4

Q ss_pred             CEEEEECCCcHHHHH-HHHHHHHC-CCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           84 TSILVVGATGTLGRQ-IVRRALDE-GYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        84 ~~vlVtGatG~iG~~-l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      +||.|+| .|.+|+. ....|.+. +.++++++++++.........++..+   .+|.+++.+  .++|+|+.+..
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~ll~--~~iD~V~I~tp   71 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSAT---CTDYRDVLQ--YGVDAVMIHAA   71 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCC---CSSTTGGGG--GCCSEEEECSC
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccc---cccHHHhcc--cccceeccccc
Confidence            4799999 5888865 55666554 46777777765444333333333222   223333322  36899988765

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.40  E-value=0.024  Score=41.76  Aligned_cols=36  Identities=11%  Similarity=0.142  Sum_probs=28.2

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD  122 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~  122 (269)
                      ||.++| .|.+|..+++.|++.|+.+ +..|+.++..+
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~   37 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALR   37 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHH
Confidence            688998 6999999999999988865 56676554433

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.28  E-value=0.13  Score=36.09  Aligned_cols=90  Identities=13%  Similarity=0.110  Sum_probs=56.6

Q ss_pred             CCEEEEECCC----------cHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh--cCcc
Q 024290           83 PTSILVVGAT----------GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL--VGVH  150 (269)
Q Consensus        83 ~~~vlVtGat----------G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~--~~~d  150 (269)
                      .++|||.|+.          -+-+.+.++.|.+.|++++.+.-+++...-...  -..-+..+--..+.+.+.+  +++|
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d--~aD~lYfeplt~e~v~~Ii~~E~p~   81 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD--TSDRLYFEPVTLEDVLEIVRIEKPK   81 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT--SSSEEECCCCSHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh--hcCceEEccCCHHHHHHHHHHhCCC
Confidence            5789999974          367889999999999999999888776432111  1111222222344555554  4789


Q ss_pred             EEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCC
Q 024290          151 TVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQ  185 (269)
Q Consensus       151 ~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~  185 (269)
                      .|+-..|..           -..+|...+.+.|++
T Consensus        82 ~ii~~~GGQ-----------talnla~~L~~~gv~  105 (121)
T d1a9xa4          82 GVIVQYGGQ-----------TPLKLARALEAAGVP  105 (121)
T ss_dssp             EEECSSSTH-----------HHHTTHHHHHHTTCC
T ss_pred             EEEeehhhh-----------hHHHHHHHHHHcCCc
Confidence            888776632           123455555666753

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.27  E-value=0.048  Score=42.68  Aligned_cols=36  Identities=31%  Similarity=0.512  Sum_probs=32.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      ...++|+|+|| |..|...+..|.++|++|+++.++.
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            46789999995 9999999999999999999998864

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=93.74  E-value=0.073  Score=39.99  Aligned_cols=70  Identities=19%  Similarity=0.259  Sum_probs=41.1

Q ss_pred             CCCCEEEEECCCcHHHHH-HHHHHHHCC--CeEEEE-eCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEE
Q 024290           81 VRPTSILVVGATGTLGRQ-IVRRALDEG--YDVRCL-VRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVID  154 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~-l~~~Ll~~G--~~V~~~-~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~  154 (269)
                      |++.+|.|+| +|.+|+. .++.+.+.+  ++|+++ ++++++......+.+...+.      ++++++++  ++|+|+.
T Consensus         1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~------~~~~ell~~~~id~v~I   73 (181)
T d1zh8a1           1 LRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF------DSYEELLESGLVDAVDL   73 (181)
T ss_dssp             CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE------SCHHHHHHSSCCSEEEE
T ss_pred             CCCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee------eeeeccccccccceeec
Confidence            4456899999 6999986 466676543  577765 45443333222222332221      34556663  5899987


Q ss_pred             cCC
Q 024290          155 CAT  157 (269)
Q Consensus       155 ~ag  157 (269)
                      +..
T Consensus        74 ~tp   76 (181)
T d1zh8a1          74 TLP   76 (181)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            765

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.73  E-value=0.037  Score=41.18  Aligned_cols=35  Identities=14%  Similarity=0.277  Sum_probs=28.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      .+++|+|+|| |++|-.++..|.+.|.+|.++.+.+
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            3578999995 9999999999999998876665543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.31  E-value=0.092  Score=42.81  Aligned_cols=36  Identities=17%  Similarity=0.160  Sum_probs=32.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~  116 (269)
                      ++.+++|+|-| -|.+|+++++.|.+.|..|++++-.
T Consensus        33 ~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          33 GFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             SSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            57889999999 6999999999999999999988753

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=93.30  E-value=0.012  Score=44.56  Aligned_cols=72  Identities=18%  Similarity=0.225  Sum_probs=44.0

Q ss_pred             CCEEEEECCCcHHHHH--HHHHHHHC----CCeEEEEeCCCCCCccc-------cccCCCEEEEcCCCCCCcHHHHhcCc
Q 024290           83 PTSILVVGATGTLGRQ--IVRRALDE----GYDVRCLVRPRPAPADF-------LRDWGATVVNADLSKPETIPATLVGV  149 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~--l~~~Ll~~----G~~V~~~~R~~~~~~~~-------~~~~~~~~i~~Dl~d~~~l~~~~~~~  149 (269)
                      .+||.|+|| |.+|..  ++..|+..    +.++++++.++++....       ....+..   ..+....+..++++++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~---~~i~~~td~~eaL~da   77 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGAD---LKFEKTMNLDDVIIDA   77 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCC---CEEEEESCHHHHHTTC
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCC---eEEEEeCChhhcccCC
Confidence            468999996 878864  34445432    46999999976543211       0111111   1122234577888999


Q ss_pred             cEEEEcCCC
Q 024290          150 HTVIDCATG  158 (269)
Q Consensus       150 d~vi~~ag~  158 (269)
                      |+|+++++.
T Consensus        78 d~Vv~~~~~   86 (171)
T d1obba1          78 DFVINTAMV   86 (171)
T ss_dssp             SEEEECCCT
T ss_pred             CeEeeeccc
Confidence            999999873

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.29  E-value=0.058  Score=43.24  Aligned_cols=34  Identities=24%  Similarity=0.393  Sum_probs=30.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      .+||+|+|| |.-|...+..|.++|++|+++-.++
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            467999995 9999999999999999999997653

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.27  E-value=0.4  Score=33.82  Aligned_cols=74  Identities=19%  Similarity=0.137  Sum_probs=50.7

Q ss_pred             CCCEEEEECCC----------cHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHh--cCc
Q 024290           82 RPTSILVVGAT----------GTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATL--VGV  149 (269)
Q Consensus        82 ~~~~vlVtGat----------G~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~--~~~  149 (269)
                      ..|||||.|+.          -+-+.+.++.|.+.|++++.+.-+++...-....  ..-+..+--..+.+.+.+  +++
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~--aD~lYfePlt~e~v~~Ii~~E~p   83 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM--ADATYIEPIHWEVVRKIIEKERP   83 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG--SSEEECSCCCHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh--cceeeeecCCHHHHHHHHHHhCc
Confidence            35899999973          4678899999999999999999887764321110  112223333456666666  478


Q ss_pred             cEEEEcCC
Q 024290          150 HTVIDCAT  157 (269)
Q Consensus       150 d~vi~~ag  157 (269)
                      |.|+-..|
T Consensus        84 d~il~~~G   91 (127)
T d1a9xa3          84 DAVLPTMG   91 (127)
T ss_dssp             SEEECSSS
T ss_pred             CCeEEEee
Confidence            99987776

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=93.21  E-value=0.064  Score=41.86  Aligned_cols=99  Identities=13%  Similarity=0.045  Sum_probs=56.0

Q ss_pred             CCEEEEECCCcHHHH-HHHHHHHHC-CCeEEEE-eCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCC
Q 024290           83 PTSILVVGATGTLGR-QIVRRALDE-GYDVRCL-VRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCAT  157 (269)
Q Consensus        83 ~~~vlVtGatG~iG~-~l~~~Ll~~-G~~V~~~-~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag  157 (269)
                      .-+|.|+| +|.+|+ ++++.+... +.+|+++ ++++++..+..++.++....  +...++++++++  ++|+|+.+..
T Consensus        33 ~iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~--~~~~~d~~ell~~~~iD~V~I~tp  109 (221)
T d1h6da1          33 RFGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRK--IYDYSNFDKIAKDPKIDAVYIILP  109 (221)
T ss_dssp             CEEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGG--EECSSSGGGGGGCTTCCEEEECSC
T ss_pred             CEEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhcccccc--ccccCchhhhcccccceeeeeccc
Confidence            34899999 589996 566666554 6788855 55544443333333321100  011233455553  5899988765


Q ss_pred             CCC----------------CccchhhcHHHHHHHHHHHHHcCC
Q 024290          158 GRP----------------EEPIKKVDWEGKVALIQCAKAMGI  184 (269)
Q Consensus       158 ~~~----------------~~~~~~~n~~~~~~li~a~~~~~v  184 (269)
                      ...                -+.....|......|++.+++.++
T Consensus       110 ~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~  152 (221)
T d1h6da1         110 NSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANK  152 (221)
T ss_dssp             GGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTC
T ss_pred             hhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCC
Confidence            211                011223567777788888887764

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.14  E-value=0.059  Score=40.56  Aligned_cols=97  Identities=11%  Similarity=0.072  Sum_probs=56.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHC-CCeEEEE-eCCCCCCccccccCCCEEEEcCCCCCCcHHHHh--cCccEEEEcCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCL-VRPRPAPADFLRDWGATVVNADLSKPETIPATL--VGVHTVIDCATGR  159 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~-~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~--~~~d~vi~~ag~~  159 (269)
                      .||.|+| +|.+|+..++.|... +.+|+++ ++++++..+..++.++.   -+..-.+++++++  .++|+|+-+....
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~ll~~~~iD~v~I~tp~~   77 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYP---ESTKIHGSYESLLEDPEIDALYVPLPTS   77 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCC---TTCEEESSHHHHHHCTTCCEEEECCCGG
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccc---cceeecCcHHHhhhccccceeeecccch
Confidence            4799999 589999999999875 5788865 45443322222222210   0000124556666  3689999776521


Q ss_pred             C----------------CccchhhcHHHHHHHHHHHHHcCC
Q 024290          160 P----------------EEPIKKVDWEGKVALIQCAKAMGI  184 (269)
Q Consensus       160 ~----------------~~~~~~~n~~~~~~li~a~~~~~v  184 (269)
                      .                -+.....+......+++.+++.++
T Consensus        78 ~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~~  118 (184)
T d1ydwa1          78 LHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGV  118 (184)
T ss_dssp             GHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTC
T ss_pred             hhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhhCC
Confidence            0                011223566667777777777654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.10  E-value=0.053  Score=39.86  Aligned_cols=34  Identities=21%  Similarity=0.380  Sum_probs=29.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDE--GYDVRCLVRP  116 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~--G~~V~~~~R~  116 (269)
                      ||+|.|.|+||-||....+-+.+.  .++|++++-+
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~   36 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG   36 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            678999999999999999988875  4899888754

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.04  E-value=0.052  Score=41.50  Aligned_cols=31  Identities=19%  Similarity=0.239  Sum_probs=28.9

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      |+|+| +|.-|...|..|+++|++|.++.+++
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            89999 59999999999999999999999964

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.03  E-value=0.038  Score=44.44  Aligned_cols=32  Identities=25%  Similarity=0.341  Sum_probs=29.7

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      +|+|+|| |-.|..++..|.+.|++|+++.+++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            6999996 8999999999999999999999864

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.99  E-value=0.02  Score=50.98  Aligned_cols=101  Identities=12%  Similarity=0.182  Sum_probs=60.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCCCCcc----------------------ccccC----CCEEEE
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRPAPAD----------------------FLRDW----GATVVN  133 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~~~~~----------------------~~~~~----~~~~i~  133 (269)
                      +...+|+|.|+ |++|..+++.|+..|. .+++++.+.-....                      .+.+.    .++.+.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~  101 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVE  101 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEES
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEc
Confidence            45578999996 8899999999999995 77887654211100                      01111    133333


Q ss_pred             cCCCCC-CcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEeccc
Q 024290          134 ADLSKP-ETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIH  193 (269)
Q Consensus       134 ~Dl~d~-~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~  193 (269)
                      .++.+. +.....+.+.|+||.+..          |......+-+.|++.++ .+|..++.
T Consensus       102 ~~~~~~~~~~~~~~~~~dvVv~~~~----------~~~~~~~l~~~c~~~~i-p~i~~~~~  151 (529)
T d1yova1         102 ESPENLLDNDPSFFCRFTVVVATQL----------PESTSLRLADVLWNSQI-PLLICRTY  151 (529)
T ss_dssp             SCHHHHHHSCGGGGGGCSEEEEESC----------CHHHHHHHHHHHHHHTC-CEEEEEEE
T ss_pred             CCchhhhhhHHHHhcCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEecc
Confidence            332210 111244567899997753          34445567888888886 46665543

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.98  E-value=0.038  Score=45.16  Aligned_cols=34  Identities=15%  Similarity=0.212  Sum_probs=30.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      |..|+|+|| |.-|..+|..|++.|++|.++.+++
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            457999995 9999999999999999999998864

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=92.94  E-value=0.059  Score=44.45  Aligned_cols=35  Identities=26%  Similarity=0.305  Sum_probs=30.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEeCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEG--YDVRCLVRPR  117 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G--~~V~~~~R~~  117 (269)
                      .+|+|+|+|| |.-|...+..|+++|  ++|+++.|+.
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            3589999995 999999999999877  6999999874

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=92.86  E-value=0.058  Score=43.05  Aligned_cols=31  Identities=23%  Similarity=0.315  Sum_probs=28.6

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      |+|+|| |..|..++.+|.++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899995 9999999999999999999999854

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.85  E-value=0.056  Score=40.58  Aligned_cols=40  Identities=15%  Similarity=0.268  Sum_probs=33.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPA  121 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~  121 (269)
                      .+++|+|+|.| +|+.+++++..|.+.| +|+++.|+.++..
T Consensus        15 ~~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~   54 (177)
T d1nvta1          15 RVKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAE   54 (177)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHH
T ss_pred             CcCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHH
Confidence            46789999999 5889999999997777 9999999865543

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.79  E-value=0.058  Score=39.62  Aligned_cols=34  Identities=29%  Similarity=0.521  Sum_probs=29.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDE--GYDVRCLVRP  116 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~--G~~V~~~~R~  116 (269)
                      +|+|.|.|+||-||....+-+.+.  .++|++++-.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~   37 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   37 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence            589999999999999999988775  4899988764

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.78  E-value=0.18  Score=38.74  Aligned_cols=72  Identities=14%  Similarity=0.261  Sum_probs=44.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC---------ccccccCCCEEEEc-CCCCCCcHHHHhc--CccE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP---------ADFLRDWGATVVNA-DLSKPETIPATLV--GVHT  151 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~---------~~~~~~~~~~~i~~-Dl~d~~~l~~~~~--~~d~  151 (269)
                      |||+|.| ++..|..+.+.|++.|++|.++.-.+++.         .+...+.++.++.. |+.+++ +.+.++  ++|+
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~-~~~~i~~~~~Dl   78 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPL-WVERIAQLSPDV   78 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHH-HHHHHHHTCCSE
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchh-hhhhhhhhcccc
Confidence            5788887 57789999999999999997765333221         11112335665543 444433 333332  6798


Q ss_pred             EEEcCC
Q 024290          152 VIDCAT  157 (269)
Q Consensus       152 vi~~ag  157 (269)
                      +|....
T Consensus        79 ii~~g~   84 (203)
T d2blna2          79 IFSFYY   84 (203)
T ss_dssp             EEEESC
T ss_pred             eeeeec
Confidence            876653

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=92.65  E-value=0.058  Score=43.61  Aligned_cols=32  Identities=22%  Similarity=0.580  Sum_probs=28.6

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGY-DVRCLVRPR  117 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~  117 (269)
                      +|+|+|| |-+|..++.+|+++|+ +|+++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            5999995 9999999999999996 699999864

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.57  E-value=0.19  Score=40.83  Aligned_cols=34  Identities=29%  Similarity=0.338  Sum_probs=29.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      -+.+=--.||..|.+|+++|+.+|++|+++.+..
T Consensus        37 VR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          37 VRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             SEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             ceEeCCCCchHHHHHHHHHHHHcCCEEEEEecCC
Confidence            4566667899999999999999999999998753

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.52  E-value=0.067  Score=40.51  Aligned_cols=33  Identities=15%  Similarity=0.296  Sum_probs=28.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPR  117 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~--G~~V~~~~R~~  117 (269)
                      |||+|+|| |++|-.++..|.+.  +.+|+++.|.+
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            68999995 89999999999876  46899888753

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=92.50  E-value=0.092  Score=36.38  Aligned_cols=35  Identities=23%  Similarity=0.231  Sum_probs=29.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHH---CCCeEEEEeCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALD---EGYDVRCLVRPRP  118 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~---~G~~V~~~~R~~~  118 (269)
                      +++++|+|| |++|-.++..|.+   .|.+|+++.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            478999995 9999999987654   4889999998653

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.33  E-value=0.078  Score=36.87  Aligned_cols=34  Identities=21%  Similarity=0.247  Sum_probs=27.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHH---CCCeEEEEeCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALD---EGYDVRCLVRPR  117 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~---~G~~V~~~~R~~  117 (269)
                      +++++|.|| |++|-.++..|.+   +|.+|+++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            478999996 9999999976654   457899999864

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.18  E-value=0.11  Score=40.86  Aligned_cols=34  Identities=26%  Similarity=0.296  Sum_probs=29.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPRP  118 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~~  118 (269)
                      .+|+|+|| |..|..++..|.+.|. +|+++.|++.
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            57999995 9999999999999995 8999988653

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=92.03  E-value=0.18  Score=37.04  Aligned_cols=71  Identities=13%  Similarity=0.255  Sum_probs=40.1

Q ss_pred             CCEEEEECCCcHHHHHH-HHHHHHC-CCeEEEE-eCCCCCCc-cccccCCCEEEEcCCCCCCcHHHH--hcCccEEEEcC
Q 024290           83 PTSILVVGATGTLGRQI-VRRALDE-GYDVRCL-VRPRPAPA-DFLRDWGATVVNADLSKPETIPAT--LVGVHTVIDCA  156 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l-~~~Ll~~-G~~V~~~-~R~~~~~~-~~~~~~~~~~i~~Dl~d~~~l~~~--~~~~d~vi~~a  156 (269)
                      +.+|.|+| +|.+|+.+ .+.|.+. ..+++++ +|+.+... +..+..++.+...+   .+++.+.  +.++|+||.+.
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~---~d~l~~~~~~~~iDiVf~AT   79 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAG---VEGLIKLPEFADIDFVFDAT   79 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSH---HHHHHHSGGGGGEEEEEECS
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccc---eeeeeecccccccCEEEEcC
Confidence            35899999 89999865 4555444 3577776 45543221 22233344443221   2223222  34789999875


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      .
T Consensus        80 p   80 (157)
T d1nvmb1          80 S   80 (157)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=92.01  E-value=0.083  Score=40.53  Aligned_cols=32  Identities=31%  Similarity=0.483  Sum_probs=28.6

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGY-DVRCLVRPR  117 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~  117 (269)
                      +|+|+|| |.-|...+..|.++|+ +|+++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            5999995 9999999999999996 799998864

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.96  E-value=0.14  Score=37.24  Aligned_cols=35  Identities=9%  Similarity=0.179  Sum_probs=29.3

Q ss_pred             CCEEEEE-CCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           83 PTSILVV-GATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        83 ~~~vlVt-GatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      ++.++|. .+.|+||..+++.|.+.|.+|+++.+.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4566665 2459999999999999999999999864

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.83  E-value=0.094  Score=38.28  Aligned_cols=31  Identities=19%  Similarity=0.479  Sum_probs=26.5

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      ||+|+|| |++|-.++..|. ++.+|+++.+.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7999995 999999999885 578999998753

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.80  E-value=0.044  Score=41.02  Aligned_cols=32  Identities=22%  Similarity=0.323  Sum_probs=25.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVR  115 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R  115 (269)
                      ..+|+|+| +|++|-.++..|.+.|.++.++.+
T Consensus         3 ~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           3 KAPVVVLG-AGLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             CSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence            34699999 599999999999999976555443

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=91.68  E-value=0.39  Score=35.58  Aligned_cols=31  Identities=26%  Similarity=0.429  Sum_probs=26.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVR  115 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R  115 (269)
                      +||.|-| =|.||+.+.+.|.+++.+|+++.-
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd   31 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALIND   31 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECC
Confidence            4788887 799999999999999999988764

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.63  E-value=0.014  Score=45.49  Aligned_cols=26  Identities=23%  Similarity=0.345  Sum_probs=23.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeE
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDV  110 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V  110 (269)
                      |||+|+|| |-+|...|..|+++|++|
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            57999995 999999999999999753

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.50  E-value=0.12  Score=36.93  Aligned_cols=35  Identities=26%  Similarity=0.327  Sum_probs=29.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHH----HCCCeEEEEeCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRAL----DEGYDVRCLVRPRP  118 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll----~~G~~V~~~~R~~~  118 (269)
                      .++++|.|| |++|-.++..|.    +.|.+|+++.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            468999995 999999998885    35899999988643

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.44  E-value=0.33  Score=35.76  Aligned_cols=24  Identities=29%  Similarity=0.407  Sum_probs=19.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALD  105 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~  105 (269)
                      ....+|.|+| .|.+|+..++.|.+
T Consensus         5 ~~k~kv~iIG-~G~~g~~h~~~l~~   28 (172)
T d1lc0a1           5 SGKFGVVVVG-VGRAGSVRLRDLKD   28 (172)
T ss_dssp             CCSEEEEEEC-CSHHHHHHHHHHTS
T ss_pred             CCCcEEEEEc-CCHHHHHHHHHHHh
Confidence            3446899999 59999998888764

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=91.37  E-value=0.17  Score=41.04  Aligned_cols=53  Identities=21%  Similarity=0.410  Sum_probs=33.0

Q ss_pred             CEEEEECC-Cc-HH--HHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCC
Q 024290           84 TSILVVGA-TG-TL--GRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADL  136 (269)
Q Consensus        84 ~~vlVtGa-tG-~i--G~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl  136 (269)
                      |||+|++| || -+  ..+|+++|.++||+|..++.......+.++..+..+...+.
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~~~~~~~~~~   57 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRI   57 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccccCCcEEEEEC
Confidence            57777764 32 22  33588999999999998876433223344455566555554

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.02  E-value=0.13  Score=38.50  Aligned_cols=68  Identities=18%  Similarity=0.278  Sum_probs=53.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      +++|+|.|+| -|-.|.+=+..|.+.|.+|++--|......+..+..+.++        -++.++.+..|+|..+..
T Consensus        14 ik~k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v--------~~~~eA~~~aDiim~L~P   81 (182)
T d1np3a2          14 IQGKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKV--------ADVKTAVAAADVVMILTP   81 (182)
T ss_dssp             HHTSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEE--------ECHHHHHHTCSEEEECSC
T ss_pred             HCCCEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhcccc--------ccHHHHhhhcCeeeeecc
Confidence            5679999999 6999999999999999999998886544333334445554        456778889999998875

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.61  E-value=0.16  Score=41.31  Aligned_cols=34  Identities=29%  Similarity=0.370  Sum_probs=30.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      .-.|+|+|| |..|...+..|.++|.+|+++.+.+
T Consensus         7 ~~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           7 EVDVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            346999995 9999999999999999999998854

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.40  E-value=0.19  Score=39.70  Aligned_cols=36  Identities=17%  Similarity=0.222  Sum_probs=32.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~  116 (269)
                      ++.+++|+|-| -|.+|+++++.|.+.|..|++++-.
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            47899999998 7999999999999999999988754

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.33  E-value=0.32  Score=36.03  Aligned_cols=72  Identities=10%  Similarity=-0.012  Sum_probs=41.3

Q ss_pred             CEEEEECC-CcHHHHHHHHHHHHCC----CeEEEEeCCCCCC-ccc--------cccCCCEEEEcCCCCCCcHHHHhcCc
Q 024290           84 TSILVVGA-TGTLGRQIVRRALDEG----YDVRCLVRPRPAP-ADF--------LRDWGATVVNADLSKPETIPATLVGV  149 (269)
Q Consensus        84 ~~vlVtGa-tG~iG~~l~~~Ll~~G----~~V~~~~R~~~~~-~~~--------~~~~~~~~i~~Dl~d~~~l~~~~~~~  149 (269)
                      +||.|+|| +.+.+..++..++...    -++++++.+++.. .+.        ....+.....   ....+..+.+++.
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~---~~~td~~~al~ga   78 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEI---HLTLDRRRALDGA   78 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEE---EEESCHHHHHTTC
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCcee---eecCCchhhcCCC
Confidence            58999996 3355555655555432    4888888865421 010        1111221111   1234456778899


Q ss_pred             cEEEEcCCC
Q 024290          150 HTVIDCATG  158 (269)
Q Consensus       150 d~vi~~ag~  158 (269)
                      |+||++++.
T Consensus        79 DvVv~ta~~   87 (169)
T d1s6ya1          79 DFVTTQFRV   87 (169)
T ss_dssp             SEEEECCCT
T ss_pred             CEEEEcccc
Confidence            999999984

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.27  E-value=0.16  Score=40.98  Aligned_cols=31  Identities=29%  Similarity=0.426  Sum_probs=28.3

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      |+|+|| |.-|...+..|.++|++|+++.+++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789995 9999999999999999999998754

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=89.32  E-value=0.013  Score=42.97  Aligned_cols=63  Identities=19%  Similarity=0.102  Sum_probs=34.5

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhcCccEEEEcCC
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                      |-++| +|.+|+++++.|.+.++.+.+..|++++..++.+..+.     ...+   ..++++..|+||.+..
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~-----~~~~---~~~~~~~~DiVil~v~   64 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGG-----KAAT---LEKHPELNGVVFVIVP   64 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCC-----CCCS---SCCCCC---CEEECSC
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccc-----cccc---hhhhhccCcEEEEecc
Confidence            34667 79999999998866444446788876655544333222     1111   2234566788888764

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=89.07  E-value=0.2  Score=41.38  Aligned_cols=30  Identities=23%  Similarity=0.172  Sum_probs=27.9

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~  116 (269)
                      |+|+| +|+-|..+|.+|.++|++|.++-+-
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            88998 6999999999999999999999874

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=88.79  E-value=0.9  Score=33.68  Aligned_cols=30  Identities=23%  Similarity=0.553  Sum_probs=23.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC----CeEEEEe
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG----YDVRCLV  114 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G----~~V~~~~  114 (269)
                      +||.|-| =|.||+.+.+.+++++    .+|+++.
T Consensus         2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaIN   35 (173)
T d1obfo1           2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAIN   35 (173)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEE
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEc
Confidence            4788888 7999999999999753    4555544

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=88.75  E-value=0.24  Score=39.46  Aligned_cols=35  Identities=11%  Similarity=0.208  Sum_probs=31.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVR  115 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R  115 (269)
                      ++++++|+|-| -|.+|+++++.|.+.|..|++++-
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            57889999999 699999999999999999998764

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=88.67  E-value=0.25  Score=38.24  Aligned_cols=32  Identities=28%  Similarity=0.408  Sum_probs=29.1

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      |+|+|| |-.|...+..|.++|++|+++.+++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            899995 99999999999999999999998653

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=88.30  E-value=1.3  Score=36.88  Aligned_cols=78  Identities=13%  Similarity=0.107  Sum_probs=56.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCC-Cccc------cccCCCEEEEcCCCCCC---cHHHHhcC
Q 024290           79 TPVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPA-PADF------LRDWGATVVNADLSKPE---TIPATLVG  148 (269)
Q Consensus        79 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~------~~~~~~~~i~~Dl~d~~---~l~~~~~~  148 (269)
                      -++.+-|||=.+ ...-|-...+.|++.|.+|+=+-+.... ....      ....+-+.+..|+.+++   .+.++++.
T Consensus         7 gPL~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~~Lv~~   85 (402)
T d1xk7a1           7 GPLAGLRVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMET   85 (402)
T ss_dssp             STTTTCEEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHHHHHTT
T ss_pred             cCCCCCEEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCccccCCchhHHhCCCCeEEEEeCcCHHHHHHHHHHHhh
Confidence            368888888776 4566888889999999999988764311 1110      11235678899998875   45677889


Q ss_pred             ccEEEEcCC
Q 024290          149 VHTVIDCAT  157 (269)
Q Consensus       149 ~d~vi~~ag  157 (269)
                      +|+||+|--
T Consensus        86 aDv~i~n~r   94 (402)
T d1xk7a1          86 TDIFIEASK   94 (402)
T ss_dssp             CSEEEEECS
T ss_pred             cCCceeeec
Confidence            999999865

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=88.01  E-value=0.92  Score=34.38  Aligned_cols=74  Identities=16%  Similarity=0.222  Sum_probs=46.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcc------------ccccCCCEEEEcCCCCCCcHHHHhc--C
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPAD------------FLRDWGATVVNADLSKPETIPATLV--G  148 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~------------~~~~~~~~~i~~Dl~d~~~l~~~~~--~  148 (269)
                      .|||+++| ++..+..+.+.|++.|++|.++.-.+++...            .....++.....+..+.+...+.++  +
T Consensus         3 ~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (206)
T d1fmta2           3 SLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQ   81 (206)
T ss_dssp             CCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHTT
T ss_pred             CcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhhc
Confidence            46799998 5788999999999999998776543322110            1112345555555555555555553  5


Q ss_pred             ccEEEEcCC
Q 024290          149 VHTVIDCAT  157 (269)
Q Consensus       149 ~d~vi~~ag  157 (269)
                      +|+++....
T Consensus        82 ~d~~v~~~~   90 (206)
T d1fmta2          82 ADVMVVVAY   90 (206)
T ss_dssp             CSEEEEESC
T ss_pred             ceEEEeecc
Confidence            787776544

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.01  E-value=0.53  Score=34.14  Aligned_cols=36  Identities=25%  Similarity=0.268  Sum_probs=29.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCC
Q 024290           81 VRPTSILVVGATGTLGRQIVRRALDEGY-DVRCLVRPR  117 (269)
Q Consensus        81 ~~~~~vlVtGatG~iG~~l~~~Ll~~G~-~V~~~~R~~  117 (269)
                      ..+++|+|+|| |..|...+..+++.|. .|+++.|.+
T Consensus        43 ~~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            34678999985 9999999999999996 577777753

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=87.67  E-value=0.27  Score=41.04  Aligned_cols=32  Identities=22%  Similarity=0.331  Sum_probs=24.6

Q ss_pred             CEEEEECC------CcHHH---HHHHHHHHHCCCeEEEEeC
Q 024290           84 TSILVVGA------TGTLG---RQIVRRALDEGYDVRCLVR  115 (269)
Q Consensus        84 ~~vlVtGa------tG~iG---~~l~~~Ll~~G~~V~~~~R  115 (269)
                      |||++++.      +|++|   ..|+++|.++||+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            56777663      46666   5678999999999999874

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=87.62  E-value=0.39  Score=35.55  Aligned_cols=70  Identities=14%  Similarity=0.060  Sum_probs=41.9

Q ss_pred             CCEEEEECCCcHHHHH-HHHHHHHC-----CCeEEEEeCCCCCCcc---cccc------CCCEEEEcCCCCCCcHHHHhc
Q 024290           83 PTSILVVGATGTLGRQ-IVRRALDE-----GYDVRCLVRPRPAPAD---FLRD------WGATVVNADLSKPETIPATLV  147 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~-l~~~Ll~~-----G~~V~~~~R~~~~~~~---~~~~------~~~~~i~~Dl~d~~~l~~~~~  147 (269)
                      ..||.|+|| |.+|.. ++..|+..     +.++++++.++++...   .+..      ....+..     ..+..++++
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~eal~   76 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-----TTDPEEAFT   76 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-----ESCHHHHHS
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-----cCChhhccC
Confidence            357999997 444543 44444432     2489999987654321   1111      1222222     235677889


Q ss_pred             CccEEEEcCCC
Q 024290          148 GVHTVIDCATG  158 (269)
Q Consensus       148 ~~d~vi~~ag~  158 (269)
                      ++|+||..+|.
T Consensus        77 ~AD~Vvitag~   87 (167)
T d1u8xx1          77 DVDFVMAHIRV   87 (167)
T ss_dssp             SCSEEEECCCT
T ss_pred             CCCEEEECCCc
Confidence            99999999984

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.58  E-value=0.4  Score=34.96  Aligned_cols=32  Identities=16%  Similarity=0.239  Sum_probs=27.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCL  113 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~  113 (269)
                      +++++.|++.+|+.|.-++..+.+.|.++--+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l   33 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL   33 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC
Confidence            46789999999999999999999999877544

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=86.54  E-value=0.19  Score=39.81  Aligned_cols=35  Identities=11%  Similarity=0.218  Sum_probs=29.2

Q ss_pred             CCEEEEECCCcHHHH-----HHHHHHHHCCCeEEEEeCCCC
Q 024290           83 PTSILVVGATGTLGR-----QIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        83 ~~~vlVtGatG~iG~-----~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      ||+|.|+| -|++|+     +|+..|++.|++|.+++-++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            57899998 888887     566688899999999998764

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=85.82  E-value=0.42  Score=38.27  Aligned_cols=31  Identities=29%  Similarity=0.399  Sum_probs=28.6

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      |+|+| +|..|...+..|+++|.+|+++.+.+
T Consensus        19 VlVIG-~G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVG-SGGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecCC
Confidence            89999 49999999999999999999998864

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=85.29  E-value=0.4  Score=38.82  Aligned_cols=32  Identities=28%  Similarity=0.412  Sum_probs=27.9

Q ss_pred             EEEECCCcHHHHHHHHHHH-----HCCCeEEEEeCCCC
Q 024290           86 ILVVGATGTLGRQIVRRAL-----DEGYDVRCLVRPRP  118 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll-----~~G~~V~~~~R~~~  118 (269)
                      |+|+|| |-.|..++..|+     ++|++|+++.|.+.
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            899995 999999999996     47999999998643

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=85.09  E-value=0.43  Score=39.34  Aligned_cols=30  Identities=23%  Similarity=0.279  Sum_probs=27.6

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~  116 (269)
                      |+|+| +|.-|..+|.+|.+.|++|.++-+-
T Consensus        10 vIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1          10 ALVIG-SGYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            89999 5999999999999999999999874

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=85.04  E-value=2.2  Score=28.97  Aligned_cols=34  Identities=15%  Similarity=0.204  Sum_probs=29.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~  116 (269)
                      ||||||+=-.-.+-..+.+.|.+.|++|+....+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~   34 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATN   34 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECC
Confidence            5899999989999999999999999998765554

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.96  E-value=0.42  Score=36.50  Aligned_cols=35  Identities=20%  Similarity=0.204  Sum_probs=29.1

Q ss_pred             CCCEEEEECCCcHHHH-----HHHHHHHHCCCeEEEEeCC
Q 024290           82 RPTSILVVGATGTLGR-----QIVRRALDEGYDVRCLVRP  116 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~-----~l~~~Ll~~G~~V~~~~R~  116 (269)
                      |+|.|.|+|+.|++|+     +|+..|.++|++|.+++-+
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            3567999999999887     5677788999999999854

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.79  E-value=0.79  Score=34.81  Aligned_cols=31  Identities=23%  Similarity=0.384  Sum_probs=26.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVR  115 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R  115 (269)
                      |||++.| ++..|..+.+.|+++|++|+++.-
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t   31 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFT   31 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEc
Confidence            5799998 678999999999999999987654

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=84.77  E-value=0.55  Score=36.56  Aligned_cols=33  Identities=18%  Similarity=0.269  Sum_probs=29.8

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      .|+|+|| |--|...+-.|.++|.+|.++.+.+.
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            4899995 99999999999999999999999754

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=84.77  E-value=1.4  Score=33.97  Aligned_cols=74  Identities=18%  Similarity=0.209  Sum_probs=49.8

Q ss_pred             CCCEEEEEC-CCcHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc----ccCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           82 RPTSILVVG-ATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFL----RDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        82 ~~~~vlVtG-atG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~----~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      .+.+||=.| |+|+.-.+|++. ... -.|++++.++.-...+.    ...++..+.+|..+++........+|++++..
T Consensus        74 pG~~VLDlGcGsG~~~~~la~~-~~~-g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~~~~  151 (230)
T d1g8sa_          74 RDSKILYLGASAGTTPSHVADI-ADK-GIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDV  151 (230)
T ss_dssp             TTCEEEEESCCSSHHHHHHHHH-TTT-SEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEEECC
T ss_pred             CCCEEEEeCEEcCHHHHHHHHh-CCC-CEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEeeccc
Confidence            467899999 568888888875 333 49999998764322211    12367788899888876665555566666654


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      .
T Consensus       152 ~  152 (230)
T d1g8sa_         152 A  152 (230)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=84.37  E-value=0.53  Score=37.25  Aligned_cols=33  Identities=24%  Similarity=0.348  Sum_probs=29.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDE-GYDVRCLVRPR  117 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~~  117 (269)
                      .-|+|+|| |.-|...+..|+++ |++|+++.+.+
T Consensus        34 ~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          34 TDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            35999996 99999999999875 99999999865

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=84.30  E-value=0.7  Score=34.98  Aligned_cols=38  Identities=18%  Similarity=0.268  Sum_probs=33.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      .+.+|+|+|+| +|--|-.++..+.+.+.+++.+.|...
T Consensus        29 ~~~gK~V~VvG-~G~Sa~dia~~~~~~~~~~~~~~~~~~   66 (235)
T d1w4xa2          29 DFSGQRVGVIG-TGSSGIQVSPQIAKQAAELFVFQRTPH   66 (235)
T ss_dssp             CCBTCEEEEEC-CSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred             CCCCCEEEEEC-CCccHHHHHHHHHhhhccccccccccc
Confidence            57899999999 689999999999999999999888753

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=84.28  E-value=0.52  Score=38.42  Aligned_cols=30  Identities=27%  Similarity=0.562  Sum_probs=27.6

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~  116 (269)
                      |+|+| +|.-|..++.+|.+.|++|.++-+-
T Consensus         7 viIVG-sG~aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           7 VVIVG-SGPIGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHhhCCCeEEEEecC
Confidence            89999 6999999999999999999999864

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.24  E-value=0.37  Score=36.83  Aligned_cols=36  Identities=19%  Similarity=0.187  Sum_probs=29.7

Q ss_pred             CCEEEEECCCcHHHH-----HHHHHHHHCCCeEEEEeCCCC
Q 024290           83 PTSILVVGATGTLGR-----QIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        83 ~~~vlVtGatG~iG~-----~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      ||.|.|+++-|++|+     +|+..|.++|++|.+++-+..
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            578999988888886     677788899999999987643

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.21  E-value=4.7  Score=29.99  Aligned_cols=24  Identities=25%  Similarity=0.612  Sum_probs=21.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG  107 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G  107 (269)
                      .+||.|-| =|.||+.+.+.+++++
T Consensus         2 ~ikigING-FGRIGR~vlR~~~~~~   25 (190)
T d1k3ta1           2 PIKVGING-FGRIGRMVFQALCEDG   25 (190)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHTT
T ss_pred             CeEEEEEC-CChHHHHHHHHHHHcC
Confidence            36899998 7999999999998875

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.18  E-value=0.84  Score=35.71  Aligned_cols=36  Identities=17%  Similarity=0.355  Sum_probs=30.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDE-GYDVRCLVRP  116 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~-G~~V~~~~R~  116 (269)
                      ++.+++|+|-| -|.+|.++++.|.++ |..|+.++-.
T Consensus        29 ~l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          29 TLKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeecccc
Confidence            47899999999 599999999999864 8998887654

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=84.18  E-value=4.7  Score=27.58  Aligned_cols=88  Identities=18%  Similarity=0.231  Sum_probs=53.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGRP  160 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~~  160 (269)
                      ..||+|-|-||..|+.-++++++-|-+|++-........+.   .++.+       .+.++++.+  ++|+-+-...   
T Consensus         6 ~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~~---~giPV-------f~sV~eAv~~~~~~~SvIfVP---   72 (119)
T d2nu7a1           6 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTH---LGLPV-------FNTVREAVAATGATASVIYVP---   72 (119)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEEE---TTEEE-------ESSHHHHHHHHCCCEEEECCC---
T ss_pred             CCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCccc---CCCch-------hhHHHHHHHHhCCCeEEEecc---
Confidence            45899999999999999999999999998877753333221   12111       245555553  4554332221   


Q ss_pred             CccchhhcHHHHHHHHHHHHHcCCCeEEEec
Q 024290          161 EEPIKKVDWEGKVALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       161 ~~~~~~~n~~~~~~li~a~~~~~v~r~V~~S  191 (269)
                      +.       .....+++++ ++|++.+|.++
T Consensus        73 p~-------~a~dA~~EAi-~agI~~iV~IT   95 (119)
T d2nu7a1          73 AP-------FCKDSILEAI-DAGIKLIITIT   95 (119)
T ss_dssp             GG-------GHHHHHHHHH-HTTCSEEEECC
T ss_pred             HH-------HHHHHHHHHH-HCCCCEEEEec
Confidence            11       1112345544 67888777766

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.16  E-value=0.55  Score=35.85  Aligned_cols=74  Identities=16%  Similarity=0.137  Sum_probs=46.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCCCCC--------c-------------cccccCCCEEEEc-CCCCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDE--GYDVRCLVRPRPAP--------A-------------DFLRDWGATVVNA-DLSKP  139 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~--G~~V~~~~R~~~~~--------~-------------~~~~~~~~~~i~~-Dl~d~  139 (269)
                      .||+|+| +|--|...|..|.++  |++|+++.+.+.-.        .             ..+...++.+... .+...
T Consensus         2 ~kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~   80 (230)
T d1cjca2           2 PQICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVGRD   80 (230)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBTTT
T ss_pred             CeEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCCCceehhhccccccccccchhhhhhhhhcCCeeEEeeEEeCcc
Confidence            3799999 499999999999765  78999998864310        0             0011234444422 22223


Q ss_pred             CcHHHHhcCccEEEEcCCC
Q 024290          140 ETIPATLVGVHTVIDCATG  158 (269)
Q Consensus       140 ~~l~~~~~~~d~vi~~ag~  158 (269)
                      ..+.++..+.|.|+-+.|.
T Consensus        81 ~~~~~l~~~~d~v~~a~Ga   99 (230)
T d1cjca2          81 VTVQELQDAYHAVVLSYGA   99 (230)
T ss_dssp             BCHHHHHHHSSEEEECCCC
T ss_pred             ccHHHHHhhhceEEEEeec
Confidence            3455555667888887773

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=83.68  E-value=0.64  Score=35.03  Aligned_cols=30  Identities=20%  Similarity=0.278  Sum_probs=27.8

Q ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Q 024290           86 ILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (269)
Q Consensus        86 vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~  116 (269)
                      |+|+|| |..|...+..+.+.|.+|.++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            789995 999999999999999999999875

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=83.64  E-value=0.94  Score=33.45  Aligned_cols=30  Identities=33%  Similarity=0.517  Sum_probs=26.0

Q ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeC
Q 024290           85 SILVVGATGTLGRQIVRRALDEGYDVRCLVR  115 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R  115 (269)
                      ||.|-| =|.||+.+.+.+++++.+|+++--
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd   31 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVND   31 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECC
Confidence            578887 799999999999999988887754

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=83.44  E-value=0.5  Score=37.27  Aligned_cols=37  Identities=22%  Similarity=0.414  Sum_probs=30.8

Q ss_pred             CCCEEEEECCCcHHHHH-----HHHHHHHCCCeEEEEeCCCC
Q 024290           82 RPTSILVVGATGTLGRQ-----IVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~-----l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      .+.+|+|+.|-|++|+.     |+..|+++|++|.+++-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            35678888779999985     57888899999999999864

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.42  E-value=0.49  Score=36.03  Aligned_cols=74  Identities=15%  Similarity=0.008  Sum_probs=48.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEeCCCCCC-------------c--------cccccCCCEEEEc
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEG-------YDVRCLVRPRPAP-------------A--------DFLRDWGATVVNA  134 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G-------~~V~~~~R~~~~~-------------~--------~~~~~~~~~~i~~  134 (269)
                      +.+|+|+| +|--|...+..|+++|       ++|+++.+.+.--             .        ..+...++++...
T Consensus         2 p~~VaVIG-aGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~~GG~~~~gi~p~~~~~~~~~~~~~~~~~~~g~~~~~~   80 (239)
T d1lqta2           2 PYYIAIVG-SGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGN   80 (239)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEES
T ss_pred             CcEEEEEC-cCHHHHHHHHHHHHcCCccccCCCceEEEecCCCCCCeeeeccCcccccchhhhhhhhhhhccCCceEEEE
Confidence            35899999 5999999999999988       5799998864210             0        0112234544432


Q ss_pred             -CCCCCCcHHHHhcCccEEEEcCC
Q 024290          135 -DLSKPETIPATLVGVHTVIDCAT  157 (269)
Q Consensus       135 -Dl~d~~~l~~~~~~~d~vi~~ag  157 (269)
                       .+.....+..+..+.|.|+.+.|
T Consensus        81 ~~v~~~~~~~~~~~~~~~v~~atG  104 (239)
T d1lqta2          81 VVVGEHVQPGELSERYDAVIYAVG  104 (239)
T ss_dssp             CCBTTTBCHHHHHHHSSEEEECCC
T ss_pred             EEeccccchhhhhccccceeeecC
Confidence             33344555666667888888777

>d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: D-Alanine ligase N-terminal domain
domain: D-Ala-D-Ala ligase, N-domain
species: Escherichia coli, gene ddlB [TaxId: 562]

Probab=82.27  E-value=3.5  Score=27.08  Aligned_cols=36  Identities=14%  Similarity=0.213  Sum_probs=25.8

Q ss_pred             CCCCEEEEECCCc-------HHHHHHHHHHHHCCCeEEEEeCC
Q 024290           81 VRPTSILVVGATG-------TLGRQIVRRALDEGYDVRCLVRP  116 (269)
Q Consensus        81 ~~~~~vlVtGatG-------~iG~~l~~~Ll~~G~~V~~~~R~  116 (269)
                      |++|..++.||.+       --|.++.+.|.+.||+|+.++..
T Consensus         1 M~~kI~vl~GG~S~E~~iSl~Sa~~v~~~L~~~~~~v~~i~~~   43 (96)
T d1iowa1           1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK   43 (96)
T ss_dssp             CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCceEEEEeCcCchhhHhHHhhHHHHHHHHHHcCeeEeeecCc
Confidence            3344455666654       34789999999999999888664

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.27  E-value=1.1  Score=34.28  Aligned_cols=125  Identities=10%  Similarity=0.009  Sum_probs=63.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccc-----------------------cccCCCEEEEcCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADF-----------------------LRDWGATVVNADLSK  138 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----------------------~~~~~~~~i~~Dl~d  138 (269)
                      .+.+||..|.. . |+ .+..|+++|++|++++-++......                       .....++++.+|+.+
T Consensus        45 ~~~rvLd~GCG-~-G~-~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCG-K-AV-EMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCT-T-CT-HHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCC-C-cH-HHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            45689999942 2 43 4667788999999999875432110                       011256778888754


Q ss_pred             CCcHHHHhcCccEEEEcCCCCCCccchhhcHHHHHHHHHHHHHcCCCeEEEecccC-CCCCCCCcHHHHHHHHHHHHH
Q 024290          139 PETIPATLVGVHTVIDCATGRPEEPIKKVDWEGKVALIQCAKAMGIQKYVFYSIHN-CDKHPEVPLMEIKYCTEQFLQ  215 (269)
Q Consensus       139 ~~~l~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~li~a~~~~~v~r~V~~SS~~-~~~~~~~~y~~sK~~~e~~~~  215 (269)
                      ....  .....|+|+..........-  ..-.....+.+.++..|  +++++.... .......||..++..+.+++.
T Consensus       122 l~~~--~~~~fd~i~~~~~l~~~~~~--~r~~~~~~~~~~LkpgG--~~~l~~~~~~~~~~~gpp~~~~~~el~~lf~  193 (229)
T d2bzga1         122 LPRT--NIGKFDMIWDRGALVAINPG--DRKCYADTMFSLLGKKF--QYLLCVLSYDPTKHPGPPFYVPHAEIERLFG  193 (229)
T ss_dssp             GGGS--CCCCEEEEEESSSTTTSCGG--GHHHHHHHHHHTEEEEE--EEEEEEEECCTTTCCCSSCCCCHHHHHHHHT
T ss_pred             cccc--ccCceeEEEEEEEEEeccch--hhHHHHHHHHhhcCCcc--eEEEEEcccCCCCCCCCCCCCCHHHHHHHhc
Confidence            3211  11346888876653222110  00111223333333333  444443222 122223356666666666664

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=82.13  E-value=1  Score=37.10  Aligned_cols=69  Identities=14%  Similarity=0.220  Sum_probs=49.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHH-CC-CeEEEEeCCCCCCcccc---c-cCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           83 PTSILVVGATGTLGRQIVRRALD-EG-YDVRCLVRPRPAPADFL---R-DWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~-~G-~~V~~~~R~~~~~~~~~---~-~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      .+++.|+| +|..+..-++.+.. .+ .+|.+.+|++++..++.   . ..++.+..+     ++++++++++|+|+-+.
T Consensus       128 a~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~-----~s~~eav~~ADIi~t~T  201 (340)
T d1x7da_         128 ARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRA-----SSVAEAVKGVDIITTVT  201 (340)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEEC-----SSHHHHHTTCSEEEECC
T ss_pred             CceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceec-----CCHHHHHhcCCceeecc
Confidence            46899999 68999988888765 45 58999999866543322   2 235666554     46788899999999776


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      .
T Consensus       202 a  202 (340)
T d1x7da_         202 A  202 (340)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.72  E-value=6.3  Score=27.32  Aligned_cols=88  Identities=18%  Similarity=0.176  Sum_probs=54.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEcCCCCCCcHHHHhc--CccEEEEcCCCC
Q 024290           82 RPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLV--GVHTVIDCATGR  159 (269)
Q Consensus        82 ~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~Dl~d~~~l~~~~~--~~d~vi~~ag~~  159 (269)
                      +..+|+|-|-||..|+.-+++.++-|-+|++-+..........   ++.+       .+.+.++.+  ++|+-+-...  
T Consensus        14 k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG~~~~---giPV-------f~tV~eA~~~~~~daSvIfVP--   81 (130)
T d1euca1          14 KNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHL---GLPV-------FNTVKEAKEQTGATASVIYVP--   81 (130)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET---TEEE-------ESSHHHHHHHHCCCEEEECCC--
T ss_pred             CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCCcccc---Cccc-------hhhHHHHHHhcCCcEEEEecC--
Confidence            3468999999999999999999999999988776533332211   2111       245555553  4665443332  


Q ss_pred             CCccchhhcHHHH-HHHHHHHHHcCCCeEEEec
Q 024290          160 PEEPIKKVDWEGK-VALIQCAKAMGIQKYVFYS  191 (269)
Q Consensus       160 ~~~~~~~~n~~~~-~~li~a~~~~~v~r~V~~S  191 (269)
                               -... ..+++++ ++|++.+|.++
T Consensus        82 ---------p~~a~dAi~EAi-~agI~liV~IT  104 (130)
T d1euca1          82 ---------PPFAAAAINEAI-DAEVPLVVCIT  104 (130)
T ss_dssp             ---------HHHHHHHHHHHH-HTTCSEEEECC
T ss_pred             ---------HHHHHHHHHHHH-hCCCCEEEEec
Confidence                     1222 2344444 47888877765

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=81.71  E-value=4.3  Score=29.62  Aligned_cols=29  Identities=21%  Similarity=0.427  Sum_probs=23.3

Q ss_pred             EEEEECCCcHHHHHHHHHHHHC---CCeEEEEe
Q 024290           85 SILVVGATGTLGRQIVRRALDE---GYDVRCLV  114 (269)
Q Consensus        85 ~vlVtGatG~iG~~l~~~Ll~~---G~~V~~~~  114 (269)
                      ||.|-| =|.||+.+.+.++++   +.+|+++-
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaIN   33 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAIN   33 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEec
Confidence            688887 799999999999874   36777664

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=81.64  E-value=6.5  Score=28.51  Aligned_cols=31  Identities=19%  Similarity=0.382  Sum_probs=25.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG-YDVRCLVR  115 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G-~~V~~~~R  115 (269)
                      +||.|-| =|.||+.+.+.++++. .+|+++.-
T Consensus         2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd   33 (166)
T d1gado1           2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAIND   33 (166)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred             eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeC
Confidence            4688888 7999999999999885 67776654

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.58  E-value=1.1  Score=34.98  Aligned_cols=35  Identities=17%  Similarity=0.211  Sum_probs=30.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHH-CCCeEEEEeC
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALD-EGYDVRCLVR  115 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~-~G~~V~~~~R  115 (269)
                      ++++++|+|-| .|.+|+++++.|.+ .|..|+.++-
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            57889999998 79999999999975 5999988764

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=81.09  E-value=0.67  Score=35.19  Aligned_cols=68  Identities=19%  Similarity=0.080  Sum_probs=45.1

Q ss_pred             CCCCCEEEEEC-CCcHHHHHHHHHHHHCC-CeEEEEeCCCCCCcccc-ccCCCEEEEcCCCCCCcHHHHhcCccEEEEcC
Q 024290           80 PVRPTSILVVG-ATGTLGRQIVRRALDEG-YDVRCLVRPRPAPADFL-RDWGATVVNADLSKPETIPATLVGVHTVIDCA  156 (269)
Q Consensus        80 ~~~~~~vlVtG-atG~iG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~-~~~~~~~i~~Dl~d~~~l~~~~~~~d~vi~~a  156 (269)
                      .+.+++||=.| |||.+|.    .++..| ..|++++.++....... ...+++++.+|+.+.+      ..+|+||.|-
T Consensus        46 dl~Gk~VLDlGcGtG~l~i----~a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~~~l~------~~fD~Vi~NP  115 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGILAC----GSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS------GKYDTWIMNP  115 (197)
T ss_dssp             SSBTSEEEEETCTTCHHHH----HHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC------CCEEEEEECC
T ss_pred             CCCCCEEEEeCCCCcHHHH----HHHHcCCCcccccccCHHHHHHHHHccccccEEEEehhhcC------CcceEEEeCc
Confidence            47789999988 4565553    355567 46999998754322111 1235889999986543      4689999885


Q ss_pred             C
Q 024290          157 T  157 (269)
Q Consensus       157 g  157 (269)
                      .
T Consensus       116 P  116 (197)
T d1ne2a_         116 P  116 (197)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=80.98  E-value=7.6  Score=28.29  Aligned_cols=30  Identities=23%  Similarity=0.369  Sum_probs=23.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCC---CeEEEEe
Q 024290           84 TSILVVGATGTLGRQIVRRALDEG---YDVRCLV  114 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G---~~V~~~~  114 (269)
                      +||.|-| =|.||+.+.+.++++.   .+|+++-
T Consensus         1 ikIgING-fGRIGR~v~R~~~~~~~~~i~ivaIN   33 (172)
T d1rm4a1           1 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVIN   33 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEc
Confidence            4788888 7999999999988754   4566553

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=80.95  E-value=0.52  Score=37.58  Aligned_cols=35  Identities=17%  Similarity=0.243  Sum_probs=28.9

Q ss_pred             CCEEEEECCCcHHHH-----HHHHHHHHCCCeEEEEeCCCC
Q 024290           83 PTSILVVGATGTLGR-----QIVRRALDEGYDVRCLVRPRP  118 (269)
Q Consensus        83 ~~~vlVtGatG~iG~-----~l~~~Ll~~G~~V~~~~R~~~  118 (269)
                      |++|.|.| =|++|+     +|+..|+++|++|.+++-+++
T Consensus         2 Mr~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ   41 (289)
T d2afhe1           2 MRQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK   41 (289)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             ccEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence            67888887 777777     578889999999999998754

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=80.90  E-value=1.3  Score=29.01  Aligned_cols=32  Identities=19%  Similarity=0.321  Sum_probs=26.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Q 024290           84 TSILVVGATGTLGRQIVRRALDEGYDVRCLVRP  116 (269)
Q Consensus        84 ~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~  116 (269)
                      |||||+| +|+=-.+|+..|.+...+|++.--+
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN   32 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGN   32 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCC
Confidence            6899999 5777889999999989998887543

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=80.78  E-value=0.55  Score=34.77  Aligned_cols=34  Identities=15%  Similarity=0.221  Sum_probs=29.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCC
Q 024290           83 PTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPR  117 (269)
Q Consensus        83 ~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~  117 (269)
                      .++|+|+|| |..|..-+..|.+.|.+|+++.+..
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            467999995 9999999999999999999998754

>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: 2-methylacyl-CoA racemase Mcr
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.59  E-value=3.8  Score=33.36  Aligned_cols=77  Identities=17%  Similarity=0.123  Sum_probs=53.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCCCCC--ccccccCCCEEEEcCCCCCC---cHHHHhcCccEEEE
Q 024290           80 PVRPTSILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAP--ADFLRDWGATVVNADLSKPE---TIPATLVGVHTVID  154 (269)
Q Consensus        80 ~~~~~~vlVtGatG~iG~~l~~~Ll~~G~~V~~~~R~~~~~--~~~~~~~~~~~i~~Dl~d~~---~l~~~~~~~d~vi~  154 (269)
                      ++.+-+||=.+ ...-|-...+.|++.|.+|+=+-+.....  ....-..+=+.+..|+.+++   .+.++++++|+||+
T Consensus         3 PL~girVld~~-~~~agp~~~~~lad~GA~VikvE~p~~~~~~~~~~~nr~K~si~lDl~~~~g~~~~~~Lv~~aDv~i~   81 (359)
T d1x74a1           3 PLSGLRVVELA-GIGPGPHAAMILGDLGADVVRIDRPSSVDGISRDAMLRNRRIVTADLKSDQGLELALKLIAKADVLIE   81 (359)
T ss_dssp             TTTTCEEEEEC-CSTHHHHHHHHHHHTTCEEEEEECC-----CCCCGGGCSCEEEECCTTSHHHHHHHHHHHTTCSEEEE
T ss_pred             CCCCCEEEEcC-CchHHHHHHHHHHHhCCEEEEECCCCCCCchhhhhhhCCCeEEEEeCcCHHHHHHHHHHHhhCCEEEe
Confidence            46777777766 45668888888999999999987642111  11111235578899998865   45677789999999


Q ss_pred             cCC
Q 024290          155 CAT  157 (269)
Q Consensus       155 ~ag  157 (269)
                      |-.
T Consensus        82 n~~   84 (359)
T d1x74a1          82 GYR   84 (359)
T ss_dssp             CSC
T ss_pred             cCC
Confidence            875

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=80.24  E-value=1.1  Score=36.18  Aligned_cols=49  Identities=27%  Similarity=0.289  Sum_probs=31.0

Q ss_pred             CEEEEE-CCC-cH--HHHHHHHHHHHCCCeEEEEeCCCCCCccccccCCCEEEEc
Q 024290           84 TSILVV-GAT-GT--LGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNA  134 (269)
Q Consensus        84 ~~vlVt-Gat-G~--iG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~~~~~i~~  134 (269)
                      |||||+ +|| |-  =..+|+++|.++||+|+.++-.  ...+...+.+++++..
T Consensus         1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~--~~~~~v~~~g~~~~~i   53 (401)
T d1iira_           1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPP--DCAERLAEVGVPHVPV   53 (401)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECG--GGHHHHHHTTCCEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeCc--chHHHHHHcCCeEEEC
Confidence            467776 444 22  2456899999999999999842  2333344456666544

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=80.07  E-value=0.47  Score=35.65  Aligned_cols=31  Identities=19%  Similarity=0.397  Sum_probs=25.6

Q ss_pred             CEEEEECCCcHHHH-----HHHHHHHHCCCeEEEEe
Q 024290           84 TSILVVGATGTLGR-----QIVRRALDEGYDVRCLV  114 (269)
Q Consensus        84 ~~vlVtGatG~iG~-----~l~~~Ll~~G~~V~~~~  114 (269)
                      |+++|+|-..++|+     .|+..|.++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78999994338887     67888899999999986