Citrus Sinensis ID: 024313

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
MAAEAIASSDVVSGDMIFEPVLEEGVFRFDCSASDRQAAYPSLSFVNGKDRDTPISTRTRPSYTPTYQCVRGQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKESTIQFIAPSSYPVFTFGPFTSPTAVLVSLSHAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLDLILVDLLEMQHLDFLDGGWV
ccccccEEcccccccEEEEEEcccccEEEEcccccccccccccEEEccccccccccccccccccccEEEEccEEEEEEEcccccEEEEcccccccccccccEEEcccccccccccccccccccccEEEEEcccccEEcEEccccccEEEEccccccEEEEccccccEEEccccccccccEEEHHccHHHHHHHHHHHHHHHHHccccccEEEEcccccccccccEEEccccccccHHHHHHHHHHHHcccccccccccccccccccccc
ccccccccccccccccEEHHHHHccEEEEcccHHHHHHccccEcccccccccccccccccccEccEEEEcccEEEEEEEccccccccccccccccccccccEEEEEEcccccccccccccccccccEEEEcccccccEEEEccccccEEccccccccccccccccccEcccccccccccEEEcHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccEEEEEcccccccHHHHHHHHHHHHHcccccccccccccccccccccc
maaeaiassdvvsgdmifepvleegvfrfdcsasdrqaaypslsfvngkdrdtpistrtrpsytptyqcvrgqqivklefpagtslygtgevsgqlertgkriftwntdawgygtgttslyqshpwvlavlpngealgvladttrrceidlrkestiqfiapssypvftfgpftspTAVLVSLSHAVYGMLMARSTYegmkladkdkrpfvltragfigsqryaatwtgdnvsnwEHLHMSISMVLQLDLILVDLLEmqhldfldggwv
maaeaiassdvvsgdMIFEPVLEEGVFRFDCSASDRQaaypslsfvngkdrdtpistrtrpsytptyqcVRGQQIVKLEFPAGTslygtgevsgqlerTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKESTIQFIAPSSYPVFTFGPFTSPTAVLVSLSHAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLDLILVDLLEMQHLDFLDGGWV
MAAEAIASSDVVSGDMIFEPVLEEGVFRFDCSASDRQAAYPSLSFVNGKDRDTPISTRTRPSYTPTYQCVRGQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKESTIQFIAPSSYPVFTFGPFTSPTAVLVSLSHAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMvlqldlilvdllEMQHLDFLDGGWV
***********VSGDMIFEPVLEEGVFRFDCSASDRQAAYPSLSF*****************YTPTYQCVRGQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKESTIQFIAPSSYPVFTFGPFTSPTAVLVSLSHAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLDLILVDLLEMQHLDFLDGGW*
**********VVSGDMIFEPVLEEGVFRFDCSASDRQAAYPSLSFVNGKDRDTPISTRTRPSYTPTYQCVRGQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKESTIQFIAPSSYPVFTFGPFTSPTAVLVSLSHAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLDLILVDLLEMQHLDFLDGG**
**********VVSGDMIFEPVLEEGVFRFDCSASDRQAAYPSLSFVNGKDRDTPISTRTRPSYTPTYQCVRGQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKESTIQFIAPSSYPVFTFGPFTSPTAVLVSLSHAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLDLILVDLLEMQHLDFLDGGWV
*************GDMIFEPVLEEGVFRFDCSASDRQAAYPSLSFVNGKDRDTPISTRTRPSYTPTYQCVRGQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKESTIQFIAPSSYPVFTFGPFTSPTAVLVSLSHAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLDLILVDLLEMQHLDFLDGGWV
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MAAEAIASSDVVSGDMIFEPVLEEGVFRFDCSASDRQAAYPSLSFVNGKDRDTPISTRTRPSYTPTYQCVRGQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKESTIQFIAPSSYPVFTFGPFTSPTAVLVSLSHAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLDLILVDLLEMQHLDFLDGGWV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query269 2.2.26 [Sep-21-2011]
Q9F234 787 Alpha-glucosidase 2 OS=Ba N/A no 0.237 0.081 0.621 2e-17
P38138 954 Glucosidase 2 subunit alp yes no 0.230 0.064 0.578 6e-15
Q653V7 885 Probable alpha-glucosidas no no 0.267 0.081 0.452 6e-13
P79403 944 Neutral alpha-glucosidase yes no 0.256 0.073 0.485 9e-12
Q4R4N7 944 Neutral alpha-glucosidase N/A no 0.249 0.070 0.470 1e-11
Q14697 944 Neutral alpha-glucosidase yes no 0.249 0.070 0.470 1e-11
Q8BHN3 944 Neutral alpha-glucosidase yes no 0.249 0.070 0.470 2e-11
Q8TET4 914 Neutral alpha-glucosidase no no 0.245 0.072 0.477 4e-11
Q8BVW0 898 Neutral alpha-glucosidase no no 0.245 0.073 0.477 1e-10
Q43763 877 Alpha-glucosidase OS=Hord N/A no 0.245 0.075 0.477 1e-10
>sp|Q9F234|AGL2_BACTQ Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens PE=3 SV=1 Back     alignment and function desciption
 Score = 89.4 bits (220), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 47/66 (71%)

Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISM 244
           H VYG +M  +TY+GMK     KRPF+LTRAGF G QRYAA WTGDN S WEHL MS+ M
Sbjct: 439 HNVYGFMMGEATYKGMKKLLNGKRPFLLTRAGFSGIQRYAAVWTGDNRSFWEHLQMSLPM 498

Query: 245 VLQLDL 250
            + L L
Sbjct: 499 CMNLGL 504

Bacillus thermoamyloliquefaciens (taxid: 1425)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 0
>sp|P38138|GLU2A_YEAST Glucosidase 2 subunit alpha OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ROT2 PE=1 SV=1 Back     alignment and function description
>sp|Q653V7|AGLU_ORYSJ Probable alpha-glucosidase Os06g0675700 OS=Oryza sativa subsp. japonica GN=Os06g0675700 PE=1 SV=1 Back     alignment and function description
>sp|P79403|GANAB_PIG Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANAB PE=1 SV=1 Back     alignment and function description
>sp|Q4R4N7|GANAB_MACFA Neutral alpha-glucosidase AB OS=Macaca fascicularis GN=GANAB PE=2 SV=1 Back     alignment and function description
>sp|Q14697|GANAB_HUMAN Neutral alpha-glucosidase AB OS=Homo sapiens GN=GANAB PE=1 SV=3 Back     alignment and function description
>sp|Q8BHN3|GANAB_MOUSE Neutral alpha-glucosidase AB OS=Mus musculus GN=Ganab PE=1 SV=1 Back     alignment and function description
>sp|Q8TET4|GANC_HUMAN Neutral alpha-glucosidase C OS=Homo sapiens GN=GANC PE=2 SV=3 Back     alignment and function description
>sp|Q8BVW0|GANC_MOUSE Neutral alpha-glucosidase C OS=Mus musculus GN=Ganc PE=2 SV=2 Back     alignment and function description
>sp|Q43763|AGLU_HORVU Alpha-glucosidase OS=Hordeum vulgare PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query269
356508232 988 PREDICTED: alpha-glucosidase 2-like [Gly 0.684 0.186 0.804 6e-84
224138396 1001 predicted protein [Populus trichocarpa] 0.676 0.181 0.791 1e-81
357484583 1058 Alpha glucosidase-like protein [Medicago 0.691 0.175 0.770 7e-81
359474648 991 PREDICTED: alpha-glucosidase 2-like [Vit 0.695 0.188 0.737 2e-79
296088485 1057 unnamed protein product [Vitis vinifera] 0.695 0.176 0.737 2e-79
255557713 991 neutral alpha-glucosidase ab precursor, 0.769 0.208 0.691 4e-79
449517947 516 PREDICTED: LOW QUALITY PROTEIN: alpha-gl 0.702 0.366 0.735 7e-79
449456921 1058 PREDICTED: alpha-glucosidase 2-like [Cuc 0.702 0.178 0.730 7e-78
356529783 1403 PREDICTED: uncharacterized protein LOC10 0.691 0.132 0.709 2e-74
18403833 991 heteroglycan glucosidase 1 [Arabidopsis 0.713 0.193 0.666 3e-73
>gi|356508232|ref|XP_003522863.1| PREDICTED: alpha-glucosidase 2-like [Glycine max] Back     alignment and taxonomy information
 Score =  316 bits (810), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 148/184 (80%), Positives = 165/184 (89%)

Query: 9   SDVVSGDMIFEPVLEEGVFRFDCSASDRQAAYPSLSFVNGKDRDTPISTRTRPSYTPTYQ 68
           S+V SG MIFEP+LE+GVFRFDCSA+DR AAYPS+SFVN KDRDTPI+T+  P YTPT++
Sbjct: 14  SEVRSGSMIFEPILEDGVFRFDCSANDRDAAYPSISFVNSKDRDTPITTQKVPLYTPTFE 73

Query: 69  CVRGQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVL 128
           C+  QQIVKLE P GTSLYGTGE SG+LERTGKR+FTWNTDAWGYG GTTSLYQSHPWVL
Sbjct: 74  CLLEQQIVKLELPVGTSLYGTGEASGELERTGKRVFTWNTDAWGYGPGTTSLYQSHPWVL 133

Query: 129 AVLPNGEALGVLADTTRRCEIDLRKESTIQFIAPSSYPVFTFGPFTSPTAVLVSLSHAVY 188
           AVLPNGEALG+LADTTRRCEIDLRKESTIQF+APSSYPV TFGPF SPTAVL+SLS A+ 
Sbjct: 134 AVLPNGEALGILADTTRRCEIDLRKESTIQFVAPSSYPVITFGPFASPTAVLISLSKAIG 193

Query: 189 GMLM 192
            + M
Sbjct: 194 TVFM 197

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224138396|ref|XP_002326592.1| predicted protein [Populus trichocarpa] gi|222833914|gb|EEE72391.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357484583|ref|XP_003612579.1| Alpha glucosidase-like protein [Medicago truncatula] gi|355513914|gb|AES95537.1| Alpha glucosidase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|359474648|ref|XP_002263148.2| PREDICTED: alpha-glucosidase 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296088485|emb|CBI37476.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255557713|ref|XP_002519886.1| neutral alpha-glucosidase ab precursor, putative [Ricinus communis] gi|223540932|gb|EEF42490.1| neutral alpha-glucosidase ab precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449517947|ref|XP_004166005.1| PREDICTED: LOW QUALITY PROTEIN: alpha-glucosidase 2-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|449456921|ref|XP_004146197.1| PREDICTED: alpha-glucosidase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356529783|ref|XP_003533467.1| PREDICTED: uncharacterized protein LOC100782358 [Glycine max] Back     alignment and taxonomy information
>gi|18403833|ref|NP_566736.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|186510357|ref|NP_001118685.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|16648903|gb|AAL24303.1| alpha glucosidase-like protein [Arabidopsis thaliana] gi|27311799|gb|AAO00865.1| Unknown protein [Arabidopsis thaliana] gi|31711788|gb|AAP68250.1| At3g23640 [Arabidopsis thaliana] gi|332643272|gb|AEE76793.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|332643273|gb|AEE76794.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query269
TAIR|locus:2088035 991 HGL1 "heteroglycan glucosidase 0.713 0.193 0.666 8.6e-100
SGD|S000000433 954 ROT2 "Glucosidase II catalytic 0.223 0.062 0.564 7.1e-13
FB|FBgn0027588 924 CG14476 [Drosophila melanogast 0.223 0.064 0.5 2.1e-11
ASPGD|ASPL0000066787 894 agdC [Emericella nidulans (tax 0.223 0.067 0.366 2.2e-10
UNIPROTKB|Q5AWI5 894 agdC "Alpha/beta-glucosidase a 0.223 0.067 0.366 2.2e-10
UNIPROTKB|F1SI19 924 GANC "Uncharacterized protein" 0.223 0.064 0.507 3.1e-10
UNIPROTKB|E1BKJ4 916 GANC "Uncharacterized protein" 0.223 0.065 0.524 5e-10
TAIR|locus:2077142 868 AT3G45940 [Arabidopsis thalian 0.219 0.067 0.483 5.9e-10
WB|WBGene00018682 903 aagr-4 [Caenorhabditis elegans 0.223 0.066 0.540 9.8e-10
WB|WBGene00009583 924 aagr-3 [Caenorhabditis elegans 0.223 0.064 0.508 1e-09
TAIR|locus:2088035 HGL1 "heteroglycan glucosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 707 (253.9 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
 Identities = 128/192 (66%), Positives = 155/192 (80%)

Query:     1 MAAEAIASSDVVSGDMIFEPVLEEGVFRFDCSASDRQAAYPSLSFVNGKDRDTPISTRTR 60
             ++ ++  + ++ S DMIFEP+LE GVFRFDCS   R+AA+PS+SF N KDR+ PI +   
Sbjct:     3 LSGDSSETVEMTSTDMIFEPILEHGVFRFDCSVDHRKAAFPSVSFKNSKDREVPIVSHIV 62

Query:    61 PSYTPTYQCVRGQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDAWGYGTGTTSL 120
             P+Y PT  C++ QQ+V  EF  GTS YGTGEVSGQLERTGKR+FTWNTDAWGYG+GTTSL
Sbjct:    63 PAYIPTCGCLQDQQVVTFEFSPGTSFYGTGEVSGQLERTGKRVFTWNTDAWGYGSGTTSL 122

Query:   121 YQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKESTIQFIAPSSYPVFTFGPFTSPTAVL 180
             YQSHPWVL VLP GE LGVLADTTR+CEIDLRKE  I+ I+P+SYP+ TFGPF+SPTAVL
Sbjct:   123 YQSHPWVLVVLPTGETLGVLADTTRKCEIDLRKEGIIRIISPASYPIITFGPFSSPTAVL 182

Query:   181 VSLSHAVYGMLM 192
              SLSHA+  + M
Sbjct:   183 ESLSHAIGTVFM 194
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
SGD|S000000433 ROT2 "Glucosidase II catalytic subunit involved in cell wall synthesis" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
FB|FBgn0027588 CG14476 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ASPGD|ASPL0000066787 agdC [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q5AWI5 agdC "Alpha/beta-glucosidase agdC" [Aspergillus nidulans FGSC A4 (taxid:227321)] Back     alignment and assigned GO terms
UNIPROTKB|F1SI19 GANC "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1BKJ4 GANC "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
TAIR|locus:2077142 AT3G45940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00018682 aagr-4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00009583 aagr-3 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query269
PLN02763 978 PLN02763, PLN02763, hydrolase, hydrolyzing O-glyco 1e-111
PLN02763 978 PLN02763, PLN02763, hydrolase, hydrolyzing O-glyco 1e-40
cd06604339 cd06604, GH31_glucosidase_II_MalA, Alpha-glucosida 5e-35
pfam01055 436 pfam01055, Glyco_hydro_31, Glycosyl hydrolases fam 3e-28
cd06603339 cd06603, GH31_GANC_GANAB_alpha, This family includ 5e-27
COG1501 772 COG1501, COG1501, Alpha-glucosidases, family 31 of 7e-20
cd06600317 cd06600, GH31_MGAM-like, This family includes the 6e-18
cd06602339 cd06602, GH31_MGAM_SI_GAA, This family includes th 7e-18
cd06589265 cd06589, GH31, The enzymes of glycosyl hydrolase f 4e-17
cd06599317 cd06599, GH31_glycosidase_Aec37, Glycosyl hydrolas 3e-16
cd06591319 cd06591, GH31_xylosidase_XylS, XylS is a glycosyl 2e-15
cd06598317 cd06598, GH31_transferase_CtsZ, CtsZ (cyclic tetra 1e-14
cd06601332 cd06601, GH31_lyase_GLase, GLases (alpha-1,4-gluca 2e-13
pfam1380268 pfam13802, Gal_mutarotas_2, Galactose mutarotase-l 4e-13
cd06596261 cd06596, GH31_CPE1046, CPE1046 is an uncharacteriz 4e-07
cd06593308 cd06593, GH31_xylosidase_YicI, YicI alpha-xylosida 4e-07
cd06594317 cd06594, GH31_glucosidase_YihQ, YihQ is a bacteria 1e-04
PRK10426 635 PRK10426, PRK10426, alpha-glucosidase; Provisional 6e-04
COG1501 772 COG1501, COG1501, Alpha-glucosidases, family 31 of 0.002
>gnl|CDD|215408 PLN02763, PLN02763, hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information 
 Score =  343 bits (881), Expect = e-111
 Identities = 128/182 (70%), Positives = 146/182 (80%)

Query: 11  VVSGDMIFEPVLEEGVFRFDCSASDRQAAYPSLSFVNGKDRDTPISTRTRPSYTPTYQCV 70
           + S DMIF P+LEEGVFRFDCS   R+AA+PSLSF N K R+ PI +   P++ PT++C 
Sbjct: 1   MTSTDMIFMPILEEGVFRFDCSEDARKAAFPSLSFKNPKLREEPIESHNVPAFIPTFECD 60

Query: 71  RGQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAV 130
             QQIV  E P+GTS YGTGEVSG LERTGKR++TWNTDAWGYG  TTSLYQSHPWV  V
Sbjct: 61  GDQQIVTFELPSGTSFYGTGEVSGPLERTGKRVYTWNTDAWGYGQNTTSLYQSHPWVFVV 120

Query: 131 LPNGEALGVLADTTRRCEIDLRKESTIQFIAPSSYPVFTFGPFTSPTAVLVSLSHAVYGM 190
           LPNGEALGVLADTTRRCEIDLRKES I+ IAP+SYPV TFGPF SP A+L SLSHA+  +
Sbjct: 121 LPNGEALGVLADTTRRCEIDLRKESIIRIIAPASYPVITFGPFPSPEALLTSLSHAIGTV 180

Query: 191 LM 192
            M
Sbjct: 181 FM 182

Length = 978
>gnl|CDD|215408 PLN02763, PLN02763, hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>gnl|CDD|133135 cd06604, GH31_glucosidase_II_MalA, Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>gnl|CDD|216268 pfam01055, Glyco_hydro_31, Glycosyl hydrolases family 31 Back     alignment and domain information
>gnl|CDD|133134 cd06603, GH31_GANC_GANAB_alpha, This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>gnl|CDD|224418 COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|133131 cd06600, GH31_MGAM-like, This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>gnl|CDD|133133 cd06602, GH31_MGAM_SI_GAA, This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>gnl|CDD|133121 cd06589, GH31, The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>gnl|CDD|133130 cd06599, GH31_glycosidase_Aec37, Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>gnl|CDD|133122 cd06591, GH31_xylosidase_XylS, XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>gnl|CDD|133129 cd06598, GH31_transferase_CtsZ, CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>gnl|CDD|133132 cd06601, GH31_lyase_GLase, GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>gnl|CDD|222390 pfam13802, Gal_mutarotas_2, Galactose mutarotase-like Back     alignment and domain information
>gnl|CDD|133127 cd06596, GH31_CPE1046, CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain Back     alignment and domain information
>gnl|CDD|133124 cd06593, GH31_xylosidase_YicI, YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>gnl|CDD|133125 cd06594, GH31_glucosidase_YihQ, YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>gnl|CDD|236691 PRK10426, PRK10426, alpha-glucosidase; Provisional Back     alignment and domain information
>gnl|CDD|224418 COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 269
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 100.0
PRK10658 665 putative alpha-glucosidase; Provisional 100.0
COG1501 772 Alpha-glucosidases, family 31 of glycosyl hydrolas 100.0
PRK10426 635 alpha-glucosidase; Provisional 100.0
KOG1066 915 consensus Glucosidase II catalytic (alpha) subunit 99.98
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 99.96
cd06600317 GH31_MGAM-like This family includes the following 99.93
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 99.93
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 99.92
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 99.92
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 99.92
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 99.92
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 99.92
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 99.92
cd06596261 GH31_CPE1046 CPE1046 is an uncharacterized Clostri 99.92
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 99.92
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 99.92
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 99.91
KOG1065 805 consensus Maltase glucoamylase and related hydrola 99.89
cd06595292 GH31_xylosidase_XylS-like This family represents a 99.89
PF01055 441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 99.87
PF1380268 Gal_mutarotas_2: Galactose mutarotase-like; PDB: 1 99.85
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 99.73
KOG1066 915 consensus Glucosidase II catalytic (alpha) subunit 98.07
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information 
Probab=100.00  E-value=1.1e-63  Score=515.33  Aligned_cols=256  Identities=69%  Similarity=1.107  Sum_probs=231.5

Q ss_pred             ecCCceEEEEeeeCCEEEEEcCcccccccCCCcccccCCCccCCcccCCCCcccceEEEECCEEEEEEEcCCCCeEEeCC
Q 024313           11 VVSGDMIFEPVLEEGVFRFDCSASDRQAAYPSLSFVNGKDRDTPISTRTRPSYTPTYQCVRGQQIVKLEFPAGTSLYGTG   90 (269)
Q Consensus        11 ~~~~~~~~i~il~~~i~Rf~~s~~~r~~~~ps~Sf~~~~~~~~~~~~~~~~~~~p~~~~d~~~~~~~~~~~~~e~fyGlG   90 (269)
                      +++++|+|+|||+++|+||+|+..+|++++||+||.++++|+++|+++++|.++|.|++++++++++++++++|+|||||
T Consensus         1 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~~~e~~YGlG   80 (978)
T PLN02763          1 MTSTDMIFMPILEEGVFRFDCSEDARKAAFPSLSFKNPKLREEPIESHNVPAFIPTFECDGDQQIVTFELPSGTSFYGTG   80 (978)
T ss_pred             CCccceeEeeeccCceEEEcCchhhhhccCCceeecCcccccccCcCCCcccccceEEeeCCEEEEEEEcCCCCeEEeCC
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccccccEEEEEeCCCCCCCCCCCCcccccceEEEEcCCCceeeeeecCCCceeEecCCCeeEEEec---------
Q 024313           91 EVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKESTIQFIA---------  161 (269)
Q Consensus        91 Ek~g~L~k~G~~~~~WntD~~gy~~~t~~LYk~iPf~i~~~~~g~~~Gif~d~~~~~~fDlg~e~~~~~~a---------  161 (269)
                      |++|+|||+|+++++||+|+++|++++++|||+|||+|++++++.+||||+||+++++||++.+...+|.+         
T Consensus        81 E~~g~L~rrG~~~~lwN~D~~gy~~~~~~LY~siPf~l~~~~~g~~yGVf~dns~~~~fDlg~~~~~~f~a~~~y~~i~~  160 (978)
T PLN02763         81 EVSGPLERTGKRVYTWNTDAWGYGQNTTSLYQSHPWVFVVLPNGEALGVLADTTRRCEIDLRKESIIRIIAPASYPVITF  160 (978)
T ss_pred             ccCCccccCCcEEEEEECCCCccCCCCCcccccEeEEEEEecCCcEEEEEEeCCCcEEEEEcCCceEEEEecCceEEEEe
Confidence            99999999999999999999999999999999999999988888999999999999999999876433211         


Q ss_pred             -------------------------------------------------------CC-----------CCCeeecC----
Q 024313          162 -------------------------------------------------------PS-----------SYPVFTFG----  171 (269)
Q Consensus       162 -------------------------------------------------------~~-----------~y~v~t~~----  171 (269)
                                                                             ||           +|++|||+    
T Consensus       161 G~gptp~eVi~~Yt~LTGrp~mpP~WALGy~qSR~~Y~sq~eV~eva~~fre~~IP~DvIwlDidYm~g~~~FTwD~~rF  240 (978)
T PLN02763        161 GPFPSPEALLTSLSHAIGTVFMPPKWALGYQQCRWSYESAKRVAEIARTFREKKIPCDVVWMDIDYMDGFRCFTFDKERF  240 (978)
T ss_pred             cCCCCHHHHHHHHHHHhCCCCCCchHHhheeeccCCCCCHHHHHHHHHHHHHcCCCceEEEEehhhhcCCCceeECcccC
Confidence                                                                   11           34556555    


Q ss_pred             ----------------------------------------------------------------CCCChHHH--------
Q 024313          172 ----------------------------------------------------------------PFTSPTAV--------  179 (269)
Q Consensus       172 ----------------------------------------------------------------~f~~P~~~--------  179 (269)
                                                                                      +|++|++.        
T Consensus       241 PdP~~mv~~Lh~~G~kvv~iidPgI~~d~gY~~y~eg~~~~~fvk~~~G~~y~G~vWpG~~~fpDFTnP~ar~WW~~~~k  320 (978)
T PLN02763        241 PDPKGLADDLHSIGFKAIWMLDPGIKAEEGYFVYDSGCENDVWIQTADGKPFVGEVWPGPCVFPDFTNKKTRSWWANLVK  320 (978)
T ss_pred             CCHHHHHHHHHHCCCEEEEEEcCCCccCCCCHHHHhHhhcCeeEECCCCCeeEeeecCCCccccCCCCHHHHHHHHHHHH
Confidence                                                                            23333310        


Q ss_pred             -------------------------------------------HhhhhhhHhHHHHHHHHHHHHHhhCCCCCcEEEeccc
Q 024313          180 -------------------------------------------LVSLSHAVYGMLMARSTYEGMKLADKDKRPFVLTRAG  216 (269)
Q Consensus       180 -------------------------------------------~~~~~hn~y~~~~~ka~~e~~~~~~~~~RpfvlsRs~  216 (269)
                                                                 .+..+||+|+++|+||+||++++..+++|||+||||+
T Consensus       321 ~l~d~GVDG~W~DmnEPa~f~~~~~t~P~~~~h~g~~~~gG~~~h~~~HNlYgll~akatyEgl~~~~~~kRPFilTRSg  400 (978)
T PLN02763        321 DFVSNGVDGIWNDMNEPAVFKTVTKTMPETNIHRGDEELGGVQNHSHYHNVYGMLMARSTYEGMLLANKNKRPFVLTRAG  400 (978)
T ss_pred             HHhcCCCcEEEccCCCCccccCCcCCCCccccccCCcccCCccCHHHHhhhhHHHHHHHHHHHHHHhCCCCCcEEEEccc
Confidence                                                       0123599999999999999999988899999999999


Q ss_pred             ccCCccceeeecCCCCCChhHHHHHHHHHHhcccccCcccccccCCcCCC
Q 024313          217 FIGSQRYAATWTGDNVSNWEHLHMSISMVLQLDLILVDLLEMQHLDFLDG  266 (269)
Q Consensus       217 ~aGsQRy~~~WtGDn~s~W~~L~~si~~~Ls~glsG~p~~g~DiGGf~g~  266 (269)
                      |+|+|||+++|+|||.++|++|+.||+++||+||||+||||+|||||.|+
T Consensus       401 faGsQRYaa~WtGDn~SsWe~L~~sI~~~LnlgLSGipf~G~DIGGF~G~  450 (978)
T PLN02763        401 FIGSQRYAATWTGDNLSNWEHLHMSIPMVLQLGLSGQPLSGPDIGGFAGD  450 (978)
T ss_pred             cCcCCCCceEECCCccCCHHHHHHHHHHHHHHHhcCCcccccccCCCCCC
Confidence            99999999999999999999999999999999999999999999999985

>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF13802 Gal_mutarotas_2: Galactose mutarotase-like; PDB: 1XSI_F 1XSK_D 1WE5_E 2F2H_F 1XSJ_F 2G3N_C 2G3M_F 3POC_A 3MKK_A 3PHA_A Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query269
3lpo_A 898 Crystal Structure Of The N-Terminal Domain Of Sucra 3e-09
3l4t_A 875 Crystal Complex Of N-Terminal Human Maltase-Glucoam 7e-09
2qly_A 870 Crystral Structure Of The N-Terminal Subunit Of Hum 7e-09
3m6d_A 666 The Crystal Structure Of The D307a Mutant Of Glycos 3e-07
3m46_A 666 The Crystal Structure Of The D73a Mutant Of Glycosi 3e-07
3pha_A 667 The Crystal Structure Of The W169y Mutant Of Alpha- 3e-07
3nuk_A 666 The Crystal Structure Of The W169y Mutant Of Alpha- 3e-07
2g3m_A 693 Crystal Structure Of The Sulfolobus Solfataricus Al 5e-07
3nsx_A 666 The Crystal Structure Of The The Crystal Structure 3e-06
2xvg_A 1020 Crystal Structure Of Alpha-Xylosidase (Gh31) From C 5e-06
3n04_A 666 The Crystal Structure Of The Alpha-Glucosidase (Fam 6e-06
2f2h_A 773 Structure Of The Yici Thiosugar Michaelis Complex L 1e-05
1xsi_A 778 Structure Of A Family 31 Alpha Glycosidase Length = 1e-05
3ton_A 908 Crystral Structure Of The C-Terminal Subunit Of Hum 4e-05
1we5_A 772 Crystal Structure Of Alpha-Xylosidase From Escheric 5e-05
4b9y_A 817 Crystal Structure Of Apo Agd31b, Alpha-transglucosy 5e-05
>pdb|3LPO|A Chain A, Crystal Structure Of The N-Terminal Domain Of Sucrase-Isomal Length = 898 Back     alignment and structure 
Iteration: 1

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSIS 243
           H++YG  MA +T + ++    +KR F+LTR+ F GS R+AA W GDN ++WE +  SI+
Sbjct: 526 HSLYGYSMAIATEQAVQKVFPNKRSFILTRSTFAGSGRHAAHWLGDNTASWEQMEWSIT 584
>pdb|3L4T|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase With Bj2661 Length = 875 Back     alignment and structure
>pdb|2QLY|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human Maltase- Glucoamylase Length = 870 Back     alignment and structure
>pdb|3M6D|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|3M46|A Chain A, The Crystal Structure Of The D73a Mutant Of Glycoside Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|3PHA|A Chain A, The Crystal Structure Of The W169y Mutant Of Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum Atcc 29174 In Complex With Acarbose Length = 667 Back     alignment and structure
>pdb|3NUK|A Chain A, The Crystal Structure Of The W169y Mutant Of Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|2G3M|A Chain A, Crystal Structure Of The Sulfolobus Solfataricus Alpha- Glucosidase Mala Length = 693 Back     alignment and structure
>pdb|3NSX|A Chain A, The Crystal Structure Of The The Crystal Structure Of The D420a Mutant Of The Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|2XVG|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From Cellvibrio Japonicus Length = 1020 Back     alignment and structure
>pdb|3N04|A Chain A, The Crystal Structure Of The Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|2F2H|A Chain A, Structure Of The Yici Thiosugar Michaelis Complex Length = 773 Back     alignment and structure
>pdb|1XSI|A Chain A, Structure Of A Family 31 Alpha Glycosidase Length = 778 Back     alignment and structure
>pdb|3TON|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human Maltase- Glucoamylase Length = 908 Back     alignment and structure
>pdb|1WE5|A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia Coli Length = 772 Back     alignment and structure
>pdb|4B9Y|A Chain A, Crystal Structure Of Apo Agd31b, Alpha-transglucosylase In Glycoside Hydrolase Family 31 Length = 817 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query269
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 2e-31
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 2e-16
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 3e-31
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 4e-16
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 1e-30
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 9e-20
2g3m_A 693 Maltase, alpha-glucosidase; hydrolase, glycoside h 9e-30
2g3m_A 693 Maltase, alpha-glucosidase; hydrolase, glycoside h 7e-18
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 9e-29
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 4e-14
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 1e-27
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 3e-27
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 5e-18
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 4e-26
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 3e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Length = 898 Back     alignment and structure
 Score =  121 bits (306), Expect = 2e-31
 Identities = 28/66 (42%), Positives = 44/66 (66%)

Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISM 244
           H++YG  MA +T + ++    +KR F+LTR+ F GS R+AA W GDN ++WE +  SI+ 
Sbjct: 526 HSLYGYSMAIATEQAVQKVFPNKRSFILTRSTFAGSGRHAAHWLGDNTASWEQMEWSITG 585

Query: 245 VLQLDL 250
           +L+  L
Sbjct: 586 MLEFSL 591
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Length = 898 Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Length = 875 Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Length = 875 Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Length = 666 Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Length = 666 Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Length = 693 Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Length = 693 Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Length = 773 Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Length = 773 Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Length = 1020 Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Length = 908 Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Length = 908 Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Length = 1027 Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Length = 1027 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query269
4ba0_A 817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 100.0
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 100.0
2g3m_A 693 Maltase, alpha-glucosidase; hydrolase, glycoside h 100.0
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 100.0
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 100.0
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 100.0
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 100.0
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 100.0
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 100.0
2xn2_A 732 Alpha-galactosidase; hydrolase, glycosidase; HET: 93.68
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
Probab=100.00  E-value=9.2e-47  Score=387.65  Aligned_cols=246  Identities=23%  Similarity=0.394  Sum_probs=190.8

Q ss_pred             CCceEEEEeeeCCEEEEEcCcccccccCCCcccccCCCcc-CCcc-----------cCCCCc-c--cc-eE--E------
Q 024313           13 SGDMIFEPVLEEGVFRFDCSASDRQAAYPSLSFVNGKDRD-TPIS-----------TRTRPS-Y--TP-TY--Q------   68 (269)
Q Consensus        13 ~~~~~~i~il~~~i~Rf~~s~~~r~~~~ps~Sf~~~~~~~-~~~~-----------~~~~~~-~--~p-~~--~------   68 (269)
                      ++..++|.+++++|+|+++++.+  +..|  ||++.+..+ ..+.           +..... |  .| .+  .      
T Consensus        53 ~~~~~~i~~~~~~iiRv~~~~~~--~~~~--s~av~~~~~~~~~~v~~~~~~~~i~t~~l~v~i~~~p~~i~~~~~g~~l  128 (817)
T 4ba0_A           53 NQGNIRLQFKSEAAIEVLYRADS--KQLP--SFALAQPESAIKAQLTETENHLQFSGGTLTARIQKRPFAISYYRDSELL  128 (817)
T ss_dssp             TTEEEEEEEEETTEEEEEESTTS--CCCC--CSSCSSTTCCCCCEEEECSSEEEEECSSEEEEEETTTTEEEEEETTEEE
T ss_pred             CCeEEEEEEECCCEEEEEEECCC--CCCC--CeEEeCCCCCCceEEEEcCCEEEEEeCCEEEEEEcCCeEEEEEECCeEE
Confidence            44578999999999999999977  3445  666653311 1111           111000 0  02 11  1      


Q ss_pred             --------EECCEEEEEEEcCCCCeEEeCCCCcccccccccEEEEEeCCCCCCCCCCCCcccccceEEEEcCCCceeeee
Q 024313           69 --------CVRGQQIVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVL  140 (269)
Q Consensus        69 --------~d~~~~~~~~~~~~~e~fyGlGEk~g~L~k~G~~~~~WntD~~gy~~~t~~LYk~iPf~i~~~~~g~~~Gif  140 (269)
                              .+.....++++++++|++|||||++++||++|+++++||+|+++|+.+++++|++|||+|+.    ++||||
T Consensus       129 ~~~~~~~~~~~~~~~~~~~l~~~e~~yGlGe~~~~l~~~G~~~~l~n~d~~~~~~~~~~~y~~iPf~~s~----~~yGvf  204 (817)
T 4ba0_A          129 LAEESGFQVNTDKINFRFYLSPGEKILGGGQRILGMDRRGQRFPLYNRAHYGYSDHSGQMYFGLPAIMSS----KQYILV  204 (817)
T ss_dssp             EEEEEEEECC--CEEEEEECCTTCCEEEEESCBSCSCCTTEEEEECCCCCTTCCSCBSSCSCEEEEEEET----TSEEEE
T ss_pred             EEecCCceeeCCceEEEEEcCCCceEEcCcccCCCcccCCCEEEEEecCCCCcCCCCccccccccEEEec----CcEEEE
Confidence                    11112346778999999999999999999999999999999999999999999999999986    689999


Q ss_pred             ecCCCceeEecCCCe--eEEEec---------------------------------------------------------
Q 024313          141 ADTTRRCEIDLRKES--TIQFIA---------------------------------------------------------  161 (269)
Q Consensus       141 ~d~~~~~~fDlg~e~--~~~~~a---------------------------------------------------------  161 (269)
                      +||+.++.||++.+.  .+.|.+                                                         
T Consensus       205 ~dn~~~~~~d~~~~~~~~~~~~~~gg~ld~y~~~G~~p~~v~~~Y~~ltG~~~lpP~WalG~~~sr~~Y~s~~ev~~vv~  284 (817)
T 4ba0_A          205 FDNSASGAMDIGKTESDILQLEAKSGRSAYILVAGNSYPSLIENFTQVTGRQPLPPRWALGSFASRFGYRSEAETRATVQ  284 (817)
T ss_dssp             ECCCSSEEEEESSSSTTEEEEEESSSCCEEEEEECSSHHHHHHHHHHHHCCCCCCCGGGGSBEECCBCCCSHHHHHHHHH
T ss_pred             EECCCceEEEEEeCCCCEEEEEEcCCcEEEEEecCCCHHHHHHHHHHhcCCCCCCCccccCcceecccCCCHHHHHHHHH
Confidence            999999999998753  222211                                                         


Q ss_pred             -------CC----------------CCCeeecCC--CCChHHHHh-----------------------------------
Q 024313          162 -------PS----------------SYPVFTFGP--FTSPTAVLV-----------------------------------  181 (269)
Q Consensus       162 -------~~----------------~y~v~t~~~--f~~P~~~~~-----------------------------------  181 (269)
                             |+                .+..|+|++  |++|+++++                                   
T Consensus       285 ~~r~~~IP~Dvi~lD~dw~g~d~~~~~gdftwd~~~FPdp~~mv~~Lh~~G~k~vl~i~P~I~~~s~~y~e~~~~g~~vk  364 (817)
T 4ba0_A          285 KYKTEDFPLDTIVLDLYWFGKDIKGHMGNLDWDKENFPTPLDMMADFKQQGVKTVLITEPFVLTSSKRWDDAVKAKALAK  364 (817)
T ss_dssp             HHHHHTCCCCEEEECGGGSCSSSSSCTTCCSCCTTTCSCHHHHHHHHHHTTCEEEEEECSEEETTSTTHHHHHHTTCBCB
T ss_pred             HHHHhCCCCcEEEEcccccCCccccccCccccccccCCCHHHHHHHHHHCCCEEEEEeCCCccCCcHHHHHHHhCCEEEE
Confidence                   11                022455552  555543211                                   


Q ss_pred             ------------------------------------------------------------------hhhhhHhHHHHHHH
Q 024313          182 ------------------------------------------------------------------SLSHAVYGMLMARS  195 (269)
Q Consensus       182 ------------------------------------------------------------------~~~hn~y~~~~~ka  195 (269)
                                                                                        ..+||+||++|++|
T Consensus       365 ~~~G~~~~~~~w~G~~~~~DftnP~ar~ww~~~~~~l~~~GvDg~W~DmnEp~~~p~d~~~~~g~~~~~hN~Y~~~~~~a  444 (817)
T 4ba0_A          365 DPQGQPKAFELYFGNGGIIDVFSKEGSRWFSSIYKDLSKQGVAGWWGDLGEPEMHPEDTQHAIGDADTVHNAYGHRWAEM  444 (817)
T ss_dssp             CTTSSBCCEEETTEEEEEBCTTSHHHHHHHHHHHHHHHHHTCCEEEECCTTTSSCCTTCEETTEEHHHHGGGHHHHHHHH
T ss_pred             CCCCCeEEEEecCCCceeecCCCHHHHHHHHHHHHHHHhCCCcEEEecCCCCCcCCccccccCCCHHHhhhHHHHHHHHH
Confidence                                                                              12699999999999


Q ss_pred             HHHHHHhhCCCCCcEEEecccccCCcccee-eecCCCCCChhHHHHHHHHHHhcccccCcccccccCCcCCC
Q 024313          196 TYEGMKLADKDKRPFVLTRAGFIGSQRYAA-TWTGDNVSNWEHLHMSISMVLQLDLILVDLLEMQHLDFLDG  266 (269)
Q Consensus       196 ~~e~~~~~~~~~RpfvlsRs~~aGsQRy~~-~WtGDn~s~W~~L~~si~~~Ls~glsG~p~~g~DiGGf~g~  266 (269)
                      +||++++..+++|||+||||+|+|+|||++ +|+|||.++|++|+.||+++|++||||+||||+|||||.|+
T Consensus       445 ~~e~~~~~~~~~RpfilsRs~~aGsqry~~~~WsGDn~s~W~~L~~~i~~~L~~~lsG~p~~g~DIGGF~g~  516 (817)
T 4ba0_A          445 LYQQQLDQFPELRPFIMMRAGFVGSQRYGMIPWTGDVSRTWGGLASQVELALQMSLLGFGYIHSDLGGFADG  516 (817)
T ss_dssp             HHHHHHHHCTTSCCCEEESCCCTTGGGGTEEEBCCSCBSSHHHHHTHHHHHHHHHHTTCTTCBCCBTCCBCC
T ss_pred             HHHHHHHhcCCCccEEEECcccCccccCCccCcCCcccCCHHHHHHHHHHHHHHhhcCCCccccCcCCCCCC
Confidence            999999988899999999999999999996 89999999999999999999999999999999999999986
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 269
d2f2ha4338 c.1.8.13 (A:248-585) Putative glucosidase YicI, do 2e-11
d2f2ha2247 b.30.5.11 (A:1-247) Putative glucosidase YicI, N-t 9e-11
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Length = 338 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: YicI catalytic domain-like
domain: Putative glucosidase YicI, domain 2
species: Escherichia coli [TaxId: 562]

 Score = 61.0 bits (147), Expect = 2e-11
 Identities = 13/64 (20%), Positives = 29/64 (45%)

Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISM 244
           H  Y  +     +  +K    ++   +  R+  +G+Q++   W GD  +N+E +  S+  
Sbjct: 190 HNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRG 249

Query: 245 VLQL 248
            L +
Sbjct: 250 GLSI 253
>d2f2ha2 b.30.5.11 (A:1-247) Putative glucosidase YicI, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 247 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query269
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 99.89
d2f2ha2247 Putative glucosidase YicI, N-terminal domain {Esch 99.8
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: YicI catalytic domain-like
domain: Putative glucosidase YicI, domain 2
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=2e-24  Score=197.86  Aligned_cols=87  Identities=17%  Similarity=0.287  Sum_probs=83.4

Q ss_pred             HhhhhhhHhHHHHHHHHHHHHHhhCCCCCcEEEecccccCCccceeeecCCCCCChhHHHHHHHHHHhcccccCcccccc
Q 024313          180 LVSLSHAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLDLILVDLLEMQ  259 (269)
Q Consensus       180 ~~~~~hn~y~~~~~ka~~e~~~~~~~~~RpfvlsRs~~aGsQRy~~~WtGDn~s~W~~L~~si~~~Ls~glsG~p~~g~D  259 (269)
                      ....+||+|+++++|+++|++++..+++|||+++||+++|+|||+++|+||+.++|++|+.+|+++|++||||+||||+|
T Consensus       185 ~~~~~~n~y~~~~~~~~~~~~~~~~~~~r~~~~~rs~~~Gsqry~~~W~GD~~s~w~~L~~~i~~~l~~~l~G~p~~g~D  264 (338)
T d2f2ha4         185 DPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHD  264 (338)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTCGGGCCEEESCBCTTGGGSCCEECCCCCSSHHHHHHHHHHHHHHHTTTCCCEEEE
T ss_pred             chhhhcchhHHHHHHHHHHHHHHhccccccceeeccccccccccceEecCCCCCChHHHHHHHHHHHHHHHcCCCccCCC
Confidence            34578999999999999999999988899999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcCCC
Q 024313          260 HLDFLDG  266 (269)
Q Consensus       260 iGGf~g~  266 (269)
                      ||||.++
T Consensus       265 igGf~~~  271 (338)
T d2f2ha4         265 IGGFENT  271 (338)
T ss_dssp             TTCSSSC
T ss_pred             cCCCCCC
Confidence            9999875
>d2f2ha2 b.30.5.11 (A:1-247) Putative glucosidase YicI, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure