Citrus Sinensis ID: 024416

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
Protein Sequence
MGRNTQIFTSIFLLLLFSPQEILIQGFDDSASRTLKQEPGRAHEVHCSRERSRAAWGVIEEYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALHCDFVMNSKSSRSKCNPAAVAKNRHLCESLANRCFPINQGPSASRLHELFLRQFCDAHKCPRKSQPFPKGGRKQPSVFYLSISILTLMLLPIFYLIVYLYQREMRGGTQELKRIPRVGRKAKPS
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHcHHHHHHHHccccHHHHccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHccccccccEEcccccccccHHHHHHHHHcccccccccccccHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHcHHEEHHEEccHHHHHHHHHHHHHHcccccccccccEEEccHHHHHHHHHHHHHHcHHHHHHccccccccccccccccccHHHHHHHHcccccccEcccccccEccHHHHHHHHHcccccccccccccHHHHHHcccccHHEEccccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcHcccccccc
Coil and Loop (DISEMBL)
MGRNTQIFTSIFLLLlfspqeiliqgfddsasrtlkqepgrahevhcsrERSRAAWGVIEEYLMPFVEQVQYEISskcrlhpdndmfrdqeqhkihvdinewrcgyckksfraeKFLDqhfdnrhnnllnvshgKCLADLCGAlhcdfvmnskssrskcnpaavAKNRHLCESLanrcfpinqgpsasrLHELFLRQFcdahkcprksqpfpkggrkqpsvFYLSISILTLMLLPIFYLIVYLYQRemrggtqelkriprvgrkakps
Flexible Loop (DISEMBL)
MGRNTQIFTSIFLLLLFSPQEILIQGFDDSASRTLKqepgrahevhcsreRSRAAWGVIEEYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALHCDFVMNSKSSRSKCNPAAVAKNRHLCESLANRCFPINQGPSASRLHELFLRQFCDAHKCPRksqpfpkggrkqpSVFYLSISILTLMLLPIFYLIVYLYQREmrggtqelkriprvgrkakps
Low Complexity Region (SEG)
MGRNTQIFTSIfllllfSPQEILIQGFDDSASRTLKQEPGRAHEVHCSRERSRAAWGVIEEYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALHCDFVMNSKSSRSKCNPAAVAKNRHLCESLANRCFPINQGPSASRLHELFLRQFCDAHKCPRKSQPFPKGGRKQPSVFYLSISILTLMLLPIFYLIVYLYQREMRGGTQELKRIPRVGRKAKPS
Disordered region (IsUnstruct)
*****QIFTSIFLLLLFSPQEILIQGFD***********************SRAAWGVIEEYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALHCDFVMN**********AAVAKNRHLCESLANRCFPINQGPSASRLHELFLRQFCDAHKC***************SVFYLSISILTLMLLPIFYLIVYLYQRE*********************
Disordered Region (DISOPRED)
*****QI*TSIFLLLLFSPQEILIQ***************************RAAWGVIEEYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALHCDFV*******************HLCESLANRCFPIN******RLHELFLRQFCDAHKC***************SVFYLSISILTLMLLPIFYLIVYLYQ***********************
Disordered Region (DISEMBL)
MGRNTQIFTSIFLLLLFSPQEILIQGFDDSASRTL****************SRAAWGVIEEYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALHCDFVMNSK***********AKNRHLCESLANRCFPINQGPSASRLHELFLRQFCDAHKCPRK**********QPSVFYLSISILTLMLLPIFYLIVYLYQREMRGGTQELKRIPRVGRKAKPS
Disordered Region (DISPRO)
****TQIFTSIFLLLLFSPQEILIQGFDDSASRTLKQEPGRAHEVHCSRERSRAAWGVIEEYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALHCDFVMNSKSSRSKCNPAAVAKNRHLCESLANRCFPINQGPSASRLHELFLRQFCDAHKCPRKSQPFPKGGRKQPSVFYLSISILTLMLLPIFYLIVYLYQREMR*******************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGRNTQIFTSIFLLLLFSPQEILIQGFDDSASRTLKQEPGRAHEVHCSRERSRAAWGVIEEYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALHCDFVMNSKSSRSKCNPAAVAKNRHLCESLANRCFPINQGPSASRLHELFLRQFCDAHKCPRKSQPFPKGGRKQPSVFYLSISILTLMLLPIFYLIVYLYQREMRGGTQELKRIPRVGRKAKPS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	268
224133834	266	predicted protein [Populus trichocarpa]	0.992	1.0	0.716	1e-113
359491160	254	PREDICTED: uncharacterized protein LOC10	0.940	0.992	0.734	1e-111
297733623	276	unnamed protein product [Vitis vinifera]	0.914	0.887	0.760	1e-111
296081316	409	unnamed protein product [Vitis vinifera]	1.0	0.655	0.641	1e-102
359488643	279	PREDICTED: uncharacterized protein LOC10	1.0	0.960	0.641	1e-101
226531528	276	uncharacterized protein LOC100275449 pre	0.888	0.862	0.705	1e-100
242083250	276	hypothetical protein SORBIDRAFT_08g00828	0.947	0.920	0.678	1e-100
238013592	275	unknown [Zea mays] gi|413916779|gb|AFW56	0.884	0.861	0.705	1e-99
449440588	280	PREDICTED: uncharacterized protein LOC10	0.906	0.867	0.680	1e-98
218186624	330	hypothetical protein OsI_37889 [Oryza sa	0.996	0.809	0.643	4e-98

>gi|224133834|ref|XP_002321672.1| predicted protein [Populus trichocarpa] gi|222868668|gb|EEF05799.1| predicted protein [Populus trichocarpa]

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 192/268 (71%), Positives = 227/268 (84%), Gaps = 2/268 (0%)

Query: 1   MGRNTQIFTSIFLLLLFSPQEILIQGFDDSASRTLKQEPGRAHEVHCSRERSRAAWGVIE 60
           MG+  +I   +FL+ L S Q +     +  A+RT+KQE G AH+VHCSRERSRAAW  IE
Sbjct: 1   MGKAARITQILFLISLLSKQILSQDVGEHVAARTVKQEEGHAHKVHCSRERSRAAWQAIE 60

Query: 61  EYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQH 120
           EYLMPFVE+ QY+ISSKCRLHP ND+FRDQE+HKIHVDINEW+CGYCKK FRAEK+LDQH
Sbjct: 61  EYLMPFVEREQYQISSKCRLHPSNDLFRDQEEHKIHVDINEWKCGYCKKHFRAEKYLDQH 120

Query: 121 FDNRHNNLLNVSHGKCLADLCGALHCDFVMNSKSSRSKCNPAAVAKNRHLCESLANRCFP 180
           FDNRH NLLN+S GKC+ADLCGALHCDF+M+SKS+++KCNPAAVAKN HLCESLA+ CFP
Sbjct: 121 FDNRHYNLLNISDGKCMADLCGALHCDFMMDSKSTKTKCNPAAVAKNHHLCESLADSCFP 180

Query: 181 INQGPSASRLHELFLRQFCDAHKCPRKSQPFPKGGRKQPSVFYLSISILTLMLLPIFYLI 240
           +NQGPSASRLHELFL QFCDAH C    + FPKGG+K+ SVFYL+ISILT+M++P+FYLI
Sbjct: 181 LNQGPSASRLHELFLHQFCDAHTCSGNKKLFPKGGKKKTSVFYLAISILTMMMIPLFYLI 240

Query: 241 VYLYQREMRGGTQELKRIPRVGRKAKPS 268
           VYL+Q EMR GTQEL+RI +  RK KPS
Sbjct: 241 VYLHQSEMRKGTQELRRISK--RKTKPS 266

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491160|ref|XP_002262859.2| PREDICTED: uncharacterized protein LOC100244377 [Vitis vinifera]

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/260 (73%), Positives = 218/260 (83%), Gaps = 8/260 (3%)

Query: 10  SIFLLLLFSPQEILIQGFDDSAS-RTLKQEPGRAHEVHCSRERSRAAWGVIEEYLMPFVE 68
           +IF L +F       Q F++SA+ R LKQ+   AHEVHCSRERSRAAW +IEEY+MPFVE
Sbjct: 2   TIFNLFMF-------QDFEESAAARNLKQQKDHAHEVHCSRERSRAAWKIIEEYMMPFVE 54

Query: 69  QVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNL 128
           + QY+ISS C+LHPDN +F DQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRH  L
Sbjct: 55  REQYQISSSCKLHPDNHLFSDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHYGL 114

Query: 129 LNVSHGKCLADLCGALHCDFVMNSKSSRSKCNPAAVAKNRHLCESLANRCFPINQGPSAS 188
           LNVSH KCLADLCGALHCD VMNSK+ ++KCNPAA  +NRHLCESLA+ CFP+N G SAS
Sbjct: 115 LNVSHSKCLADLCGALHCDLVMNSKTPKAKCNPAAAVRNRHLCESLADSCFPVNHGLSAS 174

Query: 189 RLHELFLRQFCDAHKCPRKSQPFPKGGRKQPSVFYLSISILTLMLLPIFYLIVYLYQREM 248
           RLH++FLRQFCDAH C    +PF +GG KQPS+FYL+ISILTLM+LP+FY+IVYLYQREM
Sbjct: 175 RLHDIFLRQFCDAHTCSGGGKPFSRGGMKQPSIFYLAISILTLMMLPVFYVIVYLYQREM 234

Query: 249 RGGTQELKRIPRVGRKAKPS 268
           R GTQELKRI R G K KPS
Sbjct: 235 RNGTQELKRISRHGLKTKPS 254

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297733623|emb|CBI14870.3| unnamed protein product [Vitis vinifera]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 187/246 (76%), Positives = 212/246 (86%), Gaps = 1/246 (0%)

Query: 24  IQGFDDSAS-RTLKQEPGRAHEVHCSRERSRAAWGVIEEYLMPFVEQVQYEISSKCRLHP 82
            Q F++SA+ R LKQ+   AHEVHCSRERSRAAW +IEEY+MPFVE+ QY+ISS C+LHP
Sbjct: 31  TQDFEESAAARNLKQQKDHAHEVHCSRERSRAAWKIIEEYMMPFVEREQYQISSSCKLHP 90

Query: 83  DNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCG 142
           DN +F DQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRH  LLNVSH KCLADLCG
Sbjct: 91  DNHLFSDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHYGLLNVSHSKCLADLCG 150

Query: 143 ALHCDFVMNSKSSRSKCNPAAVAKNRHLCESLANRCFPINQGPSASRLHELFLRQFCDAH 202
           ALHCD VMNSK+ ++KCNPAA  +NRHLCESLA+ CFP+N G SASRLH++FLRQFCDAH
Sbjct: 151 ALHCDLVMNSKTPKAKCNPAAAVRNRHLCESLADSCFPVNHGLSASRLHDIFLRQFCDAH 210

Query: 203 KCPRKSQPFPKGGRKQPSVFYLSISILTLMLLPIFYLIVYLYQREMRGGTQELKRIPRVG 262
            C    +PF +GG KQPS+FYL+ISILTLM+LP+FY+IVYLYQREMR GTQELKRI R G
Sbjct: 211 TCSGGGKPFSRGGMKQPSIFYLAISILTLMMLPVFYVIVYLYQREMRNGTQELKRISRHG 270

Query: 263 RKAKPS 268
            K KPS
Sbjct: 271 LKTKPS 276

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081316|emb|CBI17698.3| unnamed protein product [Vitis vinifera]

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 179/279 (64%), Positives = 211/279 (75%), Gaps = 11/279 (3%)

Query: 1   MGRNTQIFTSIFLLLL----------FSPQEILIQGFDDSA-SRTLKQEPGRAHEVHCSR 49
           MGR+  +F+ +  L +           SP     QGF +S  SR +KQ+    HEVHCSR
Sbjct: 131 MGRSASLFSMVLWLWVCLQLRPTTSSISPPLHTNQGFQESTNSRNVKQDQDGVHEVHCSR 190

Query: 50  ERSRAAWGVIEEYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKK 109
           ERSRAAW +IEEYLMPFVE+  Y+ISS CRLH +ND++RDQEQHKIHVDINEWRCGYCKK
Sbjct: 191 ERSRAAWKIIEEYLMPFVEKEGYQISSSCRLHHENDLYRDQEQHKIHVDINEWRCGYCKK 250

Query: 110 SFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALHCDFVMNSKSSRSKCNPAAVAKNRH 169
           SF AE +LD+HFDNRH NLLNVS  KCLAD+CGALHCD VM+SK  ++KCNPAA A+N H
Sbjct: 251 SFYAENYLDKHFDNRHYNLLNVSQNKCLADVCGALHCDHVMDSKLQKTKCNPAAAARNHH 310

Query: 170 LCESLANRCFPINQGPSASRLHELFLRQFCDAHKCPRKSQPFPKGGRKQPSVFYLSISIL 229
           LCESLA+ CFP++ GPSASRLHE FLRQFCDAH C    +PF +G +K+ SVFYL ISIL
Sbjct: 311 LCESLADGCFPVSGGPSASRLHEFFLRQFCDAHTCTGGRKPFSRGRKKRTSVFYLCISIL 370

Query: 230 TLMLLPIFYLIVYLYQREMRGGTQELKRIPRVGRKAKPS 268
           TLMLLP+FY  VYLYQR +R G Q  +RI   GRK KP+
Sbjct: 371 TLMLLPLFYFFVYLYQRGLRRGAQNFRRISESGRKKKPT 409

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488643|ref|XP_002271064.2| PREDICTED: uncharacterized protein LOC100257742 [Vitis vinifera]

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/279 (64%), Positives = 211/279 (75%), Gaps = 11/279 (3%)

Query: 1   MGRNTQIFTSIFLLLL----------FSPQEILIQGFDDSA-SRTLKQEPGRAHEVHCSR 49
           MGR+  +F+ +  L +           SP     QGF +S  SR +KQ+    HEVHCSR
Sbjct: 1   MGRSASLFSMVLWLWVCLQLRPTTSSISPPLHTNQGFQESTNSRNVKQDQDGVHEVHCSR 60

Query: 50  ERSRAAWGVIEEYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKK 109
           ERSRAAW +IEEYLMPFVE+  Y+ISS CRLH +ND++RDQEQHKIHVDINEWRCGYCKK
Sbjct: 61  ERSRAAWKIIEEYLMPFVEKEGYQISSSCRLHHENDLYRDQEQHKIHVDINEWRCGYCKK 120

Query: 110 SFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALHCDFVMNSKSSRSKCNPAAVAKNRH 169
           SF AE +LD+HFDNRH NLLNVS  KCLAD+CGALHCD VM+SK  ++KCNPAA A+N H
Sbjct: 121 SFYAENYLDKHFDNRHYNLLNVSQNKCLADVCGALHCDHVMDSKLQKTKCNPAAAARNHH 180

Query: 170 LCESLANRCFPINQGPSASRLHELFLRQFCDAHKCPRKSQPFPKGGRKQPSVFYLSISIL 229
           LCESLA+ CFP++ GPSASRLHE FLRQFCDAH C    +PF +G +K+ SVFYL ISIL
Sbjct: 181 LCESLADGCFPVSGGPSASRLHEFFLRQFCDAHTCTGGRKPFSRGRKKRTSVFYLCISIL 240

Query: 230 TLMLLPIFYLIVYLYQREMRGGTQELKRIPRVGRKAKPS 268
           TLMLLP+FY  VYLYQR +R G Q  +RI   GRK KP+
Sbjct: 241 TLMLLPLFYFFVYLYQRGLRRGAQNFRRISESGRKKKPT 279

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226531528|ref|NP_001142988.1| uncharacterized protein LOC100275449 precursor [Zea mays] gi|195612594|gb|ACG28127.1| zinc finger protein [Zea mays]

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 168/238 (70%), Positives = 200/238 (84%)

Query: 31  ASRTLKQEPGRAHEVHCSRERSRAAWGVIEEYLMPFVEQVQYEISSKCRLHPDNDMFRDQ 90
            SR L Q    AHEVHCSRERSRAAW  I+EYLMPFVE+ +YE+ SKCRL PDNDMFR+Q
Sbjct: 39  GSRILLQTNPDAHEVHCSRERSRAAWEAIDEYLMPFVEKEKYELPSKCRLRPDNDMFREQ 98

Query: 91  EQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALHCDFVM 150
           EQHKIH DINEW CG+CKK+FRAEKF+DQHF+NRH NL++ S G+C+ADLCGALHCD +M
Sbjct: 99  EQHKIHFDINEWHCGFCKKAFRAEKFIDQHFENRHKNLVDNSEGRCMADLCGALHCDLMM 158

Query: 151 NSKSSRSKCNPAAVAKNRHLCESLANRCFPINQGPSASRLHELFLRQFCDAHKCPRKSQP 210
             K  +SKCN AA  +NRHLCESLA+ CFPINQG +ASRLHE FLRQFCDAH C + ++P
Sbjct: 159 QFKKPKSKCNAAAATRNRHLCESLADSCFPINQGLAASRLHEFFLRQFCDAHTCSKGTKP 218

Query: 211 FPKGGRKQPSVFYLSISILTLMLLPIFYLIVYLYQREMRGGTQELKRIPRVGRKAKPS 268
           FPKGGRKQ +  YL++SILTL+LLP+FYLIV+L+QREMR GTQ+LKR  ++G+K KPS
Sbjct: 219 FPKGGRKQTNRLYLALSILTLILLPLFYLIVFLHQREMRKGTQDLKRFSKIGQKKKPS 276

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242083250|ref|XP_002442050.1| hypothetical protein SORBIDRAFT_08g008280 [Sorghum bicolor] gi|241942743|gb|EES15888.1| hypothetical protein SORBIDRAFT_08g008280 [Sorghum bicolor]

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/255 (67%), Positives = 207/255 (81%), Gaps = 1/255 (0%)

Query: 15  LLFSPQEILIQGFDDS-ASRTLKQEPGRAHEVHCSRERSRAAWGVIEEYLMPFVEQVQYE 73
           LLF       Q F ++  SR L Q    AHEVHCSRERSRAAW  I+EYLMPFVE+ +YE
Sbjct: 22  LLFVDGSHQDQEFREAVGSRILLQTNPDAHEVHCSRERSRAAWEAIDEYLMPFVEKEKYE 81

Query: 74  ISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSH 133
           + SKCRL PDNDMFR+QEQHKIH DINEW CG+CKK+FRAEKFLDQHF+NRH NL++ S 
Sbjct: 82  LPSKCRLRPDNDMFREQEQHKIHFDINEWHCGFCKKAFRAEKFLDQHFENRHKNLVDNSE 141

Query: 134 GKCLADLCGALHCDFVMNSKSSRSKCNPAAVAKNRHLCESLANRCFPINQGPSASRLHEL 193
           G+C+ADLCGALHCD +M  K  +SKCN AA  +NRHLCESLA+ CFP+NQG +ASRLHE 
Sbjct: 142 GRCMADLCGALHCDLMMQFKKPKSKCNAAAATRNRHLCESLADSCFPVNQGLAASRLHEF 201

Query: 194 FLRQFCDAHKCPRKSQPFPKGGRKQPSVFYLSISILTLMLLPIFYLIVYLYQREMRGGTQ 253
           FLRQFCDAH C + ++PFPKGGRKQ + FYL++ ILTL+LLP+FYLIV+L+QREMR GTQ
Sbjct: 202 FLRQFCDAHTCNKGTKPFPKGGRKQTNRFYLALCILTLILLPLFYLIVFLHQREMRKGTQ 261

Query: 254 ELKRIPRVGRKAKPS 268
           +LKR  ++G+K KPS
Sbjct: 262 DLKRFSKIGQKKKPS 276

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|238013592|gb|ACR37831.1| unknown [Zea mays] gi|413916779|gb|AFW56711.1| zinc finger protein [Zea mays]

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 168/238 (70%), Positives = 201/238 (84%), Gaps = 1/238 (0%)

Query: 31  ASRTLKQEPGRAHEVHCSRERSRAAWGVIEEYLMPFVEQVQYEISSKCRLHPDNDMFRDQ 90
            SR L+  P  AHEVHCSRERSRAAW  I+EYLMPFVE+ +YE+ SKCRL PDNDMFR+Q
Sbjct: 39  GSRILQTNPD-AHEVHCSRERSRAAWEAIDEYLMPFVEKEKYELPSKCRLRPDNDMFREQ 97

Query: 91  EQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALHCDFVM 150
           EQHKIH DINEW CG+CKK+FRAEKF+DQHF+NRH NL++ S G+C+ADLCGALHCD +M
Sbjct: 98  EQHKIHFDINEWHCGFCKKAFRAEKFIDQHFENRHKNLVDNSEGRCMADLCGALHCDLMM 157

Query: 151 NSKSSRSKCNPAAVAKNRHLCESLANRCFPINQGPSASRLHELFLRQFCDAHKCPRKSQP 210
             K  +SKCN AA  +NRHLCESLA+ CFPINQG +ASRLHE FLRQFCDAH C + ++P
Sbjct: 158 QFKKPKSKCNAAAATRNRHLCESLADSCFPINQGLAASRLHEFFLRQFCDAHTCSKGTKP 217

Query: 211 FPKGGRKQPSVFYLSISILTLMLLPIFYLIVYLYQREMRGGTQELKRIPRVGRKAKPS 268
           FPKGGRKQ +  YL++SILTL+LLP+FYLIV+L+QREMR GTQ+LKR  ++G+K KPS
Sbjct: 218 FPKGGRKQTNRLYLALSILTLILLPLFYLIVFLHQREMRKGTQDLKRFSKIGQKKKPS 275

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440588|ref|XP_004138066.1| PREDICTED: uncharacterized protein LOC101218367 [Cucumis sativus]

 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 166/244 (68%), Positives = 202/244 (82%), Gaps = 1/244 (0%)

Query: 25  QGFDDSAS-RTLKQEPGRAHEVHCSRERSRAAWGVIEEYLMPFVEQVQYEISSKCRLHPD 83
           Q  + SA+ R L+Q      EVHCSRERSR AW +IEE+L+PF+E+  YE+S++CRLHP+
Sbjct: 36  QDEEQSATLRPLEQNEEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYEVSTQCRLHPN 95

Query: 84  NDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGA 143
           ND+FRDQEQHKIH+DIN W+CGYC+KSFRAEKFLD+HFDNRH+NLLNVSHGKCLADLCGA
Sbjct: 96  NDLFRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHSNLLNVSHGKCLADLCGA 155

Query: 144 LHCDFVMNSKSSRSKCNPAAVAKNRHLCESLANRCFPINQGPSASRLHELFLRQFCDAHK 203
           LHCD  M+ KS +SKC PAA A+N+HLCESLA+ CFPIN+GPSA+RLHELFL QFC AH 
Sbjct: 156 LHCDLKMDIKSRKSKCKPAAAARNKHLCESLADSCFPINEGPSANRLHELFLHQFCGAHS 215

Query: 204 CPRKSQPFPKGGRKQPSVFYLSISILTLMLLPIFYLIVYLYQREMRGGTQELKRIPRVGR 263
           C  K +PF +G  +QP +FY++ SIL LMLLPIFY+IVYL++RE R G + LKRI + GR
Sbjct: 216 CTGKQKPFSRGAARQPGIFYMASSILILMLLPIFYVIVYLHRRESRNGIEVLKRISKAGR 275

Query: 264 KAKP 267
           K KP
Sbjct: 276 KNKP 279

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218186624|gb|EEC69051.1| hypothetical protein OsI_37889 [Oryza sativa Indica Group]

 Score =  363 bits (932), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 173/269 (64%), Positives = 211/269 (78%), Gaps = 2/269 (0%)

Query: 2   GRN-TQIFTSIFLLLLFSPQEILIQGFDDSA-SRTLKQEPGRAHEVHCSRERSRAAWGVI 59
           GR+ +  +  +F   L +      Q F ++A SRTL       ++VHCSRERSRAAW  I
Sbjct: 62  GRSRSAAYLVLFASCLLAVAAASHQEFHEAAGSRTLLMSHEHTNQVHCSRERSRAAWKAI 121

Query: 60  EEYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQ 119
           +EYLMPFVE+ +YE+ SKCRLHPDNDMFR+QEQHKIH DINEWRCG+CKK+FRAEKFLDQ
Sbjct: 122 DEYLMPFVEKEKYELPSKCRLHPDNDMFREQEQHKIHFDINEWRCGFCKKAFRAEKFLDQ 181

Query: 120 HFDNRHNNLLNVSHGKCLADLCGALHCDFVMNSKSSRSKCNPAAVAKNRHLCESLANRCF 179
           HF NRHNNL++ S G+CLADLCGALHCD ++  K  +SKC+  A A+NRHLCESLA+ CF
Sbjct: 182 HFHNRHNNLVDNSQGRCLADLCGALHCDLMLEFKKPKSKCSATAAARNRHLCESLADSCF 241

Query: 180 PINQGPSASRLHELFLRQFCDAHKCPRKSQPFPKGGRKQPSVFYLSISILTLMLLPIFYL 239
           PINQG SASRLHE FLRQFCDAH C   S+PFPKGGRKQ + FYL++  LT++LLP+FYL
Sbjct: 242 PINQGQSASRLHEFFLRQFCDAHTCKNGSKPFPKGGRKQTNRFYLALCALTIVLLPLFYL 301

Query: 240 IVYLYQREMRGGTQELKRIPRVGRKAKPS 268
           IV+L+QREM+ G Q L+RI +V +K KPS
Sbjct: 302 IVFLHQREMKKGGQNLRRISKVVQKKKPS 330

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	268
TAIR|locus:2162012	271	AT5G63280 "AT5G63280" [Arabido	0.910	0.900	0.680	1.6e-95
TAIR|locus:2168783	272	AT5G40710 "AT5G40710" [Arabido	0.835	0.823	0.604	3.3e-79
FB|FBgn0031257	667	CG4133 [Drosophila melanogaste	0.447	0.179	0.322	4.3e-19
CGD|CAL0005892	132	orf19.4195 [Candida albicans (	0.25	0.507	0.373	7.1e-07
UNIPROTKB|Q59NH5	132	CaO19.4195 "Potential zinc fin	0.25	0.507	0.373	7.1e-07

TAIR|locus:2162012 AT5G63280 "AT5G63280" [Arabidopsis thaliana (taxid:3702)]

 Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
 Identities = 168/247 (68%), Positives = 202/247 (81%)

Query:    25 QGFDDSASRTLKQEP---GRAHEVHCSRERSRAAWGVIEEYLMPFVEQVQYEISSKCRLH 81
             QGF++S S  L  E      A E+HCSRERSRAAW +I++YL PFVE+ +YEI   CRLH
Sbjct:    25 QGFEESESTRLVNEEVEVSNAPEIHCSRERSRAAWQIIQDYLTPFVERERYEIPKNCRLH 84

Query:    82 PDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLC 141
             PDND++RDQE HK+HVD+ EW+CGYCKKSF  EKFLD+HF  RH NLLN +  KCLADLC
Sbjct:    85 PDNDLYRDQEHHKVHVDVFEWKCGYCKKSFNDEKFLDKHFSTRHYNLLNTTDTKCLADLC 144

Query:   142 GALHCDFVMNSKSSRSKCNPAAVAKNRHLCESLANRCFPINQGPSASRLHELFLRQFCDA 201
             GALHCDFV++SK  +SKCNP AVAKNRHLCES+AN CFP++QGPSASRLHE FLRQFCDA
Sbjct:   145 GALHCDFVLSSKKPKSKCNPPAVAKNRHLCESVANSCFPVSQGPSASRLHEHFLRQFCDA 204

Query:   202 HKCPRKSQPFPKGGRKQPSVFYLSISILTLMLLPIFYLIVYLYQREMRGGTQELKRIPRV 261
             H C    +PFP+GG+K+  VFYL+ISILTLMLLP+FYL+V+L+QRE R GTQ+L+RI + 
Sbjct:   205 HTCTGNDKPFPRGGKKKSGVFYLAISILTLMLLPLFYLLVFLHQREKRSGTQDLRRIIKS 264

Query:   262 GRKAKPS 268
             G+K KPS
Sbjct:   265 GKKTKPS 271

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA;ISS

TAIR|locus:2168783 AT5G40710 "AT5G40710" [Arabidopsis thaliana (taxid:3702)]

 Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
 Identities = 136/225 (60%), Positives = 181/225 (80%)

Query:    43 HEVHCSRERSRAAWGVIEEYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVDINEW 102
             HE+HCSRERSR AW +I+EYLMP+VE+ +Y++ S CR+H DND++R+QE+HK+  DINEW
Sbjct:    48 HEIHCSRERSRVAWKIIQEYLMPYVEKERYQLPSTCRVHRDNDIYREQEEHKLRSDINEW 107

Query:   103 RCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALHCDFVMNSKSSRSKCNPA 162
             RCG+CKK+F  EK+LD+HFD+RH NLLN SHGKCL+DLCGALHCD V+++   +SKCNPA
Sbjct:   108 RCGFCKKAFYEEKYLDKHFDSRHYNLLNASHGKCLSDLCGALHCDLVVDTARLKSKCNPA 167

Query:   163 AVAKNRHLCESLANRCFPINQGPSASRLHELFLRQFCDAHKCPRKSQPFPKGGRKQPSVF 222
             A AKNRHLCESLAN CFP+N+G SA+RLH+ FLRQFCDAH C   S+P  +  +K+ S+ 
Sbjct:   168 AAAKNRHLCESLANSCFPVNKGSSANRLHDFFLRQFCDAHTCSGGSKPLSQKPKKR-SIV 226

Query:   223 YLSISILTLMLLPIFYLIVYLYQREMRGGTQELKRIPRVGRKAKP 267
             Y+  SI+ L++L ++Y  VYL++R ++  +Q+LKRI   G K KP
Sbjct:   227 YIIFSIIVLVVLLLYYSFVYLFRRGLKRRSQDLKRIRHNGLKKKP 271

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA;ISS

FB|FBgn0031257 CG4133 [Drosophila melanogaster (taxid:7227)]

 Score = 198 (74.8 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
 Identities = 39/121 (32%), Positives = 60/121 (49%)

Query:    39 PGRAHEVHCSRERSRAAWGVIEEYLMPFVEQVQYEISSKCRLHPDNDMFRDQEQHKIHVD 98
             P     + CSR+ SR    ++     P +++ Q ++  +C LHP  D+F  ++  K    
Sbjct:    23 PTNVIRILCSRDNSRLVRKIVRSKWTPILDKHQVKLPLECPLHPFRDVFAPRQDAKQRDR 82

Query:    99 INEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGK-CLADLCGALHCDFVMNSKSSRS 157
               +W C  C KSF  EK LD HFD RH +++N +    CLAD C  + C+      +S  
Sbjct:    83 PTQWTCRKCGKSFYQEKHLDLHFDTRHKSIINEAEDAVCLADFCDIMRCEVFETEDASSL 142

Query:   158 K 158
             K
Sbjct:   143 K 143

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

CGD|CAL0005892 orf19.4195 [Candida albicans (taxid:5476)]

 Score = 118 (46.6 bits), Expect = 7.1e-07, P = 7.1e-07
 Identities = 28/75 (37%), Positives = 37/75 (49%)

Query:    78 CRLHPD-NDMFRDQEQHKIHV-DINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSH-- 133
             C  HP  N  F D +Q+ +HV  I+E  C  C K F  +KFL  H D  HN +L +    
Sbjct:    28 CNYHPCFNQAFEDYQQYHLHVVSIHEHTCESCLKVFPDKKFLSLHIDENHNPILQIKQER 87

Query:   134 G----KCLADLCGAL 144
             G    KC  + C A+
Sbjct:    88 GDKIFKCYTESCKAV 102

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q59NH5 CaO19.4195 "Potential zinc finger protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 118 (46.6 bits), Expect = 7.1e-07, P = 7.1e-07
 Identities = 28/75 (37%), Positives = 37/75 (49%)

Query:    78 CRLHPD-NDMFRDQEQHKIHV-DINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSH-- 133
             C  HP  N  F D +Q+ +HV  I+E  C  C K F  +KFL  H D  HN +L +    
Sbjct:    28 CNYHPCFNQAFEDYQQYHLHVVSIHEHTCESCLKVFPDKKFLSLHIDENHNPILQIKQER 87

Query:   134 G----KCLADLCGAL 144
             G    KC  + C A+
Sbjct:    88 GDKIFKCYTESCKAV 102


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.137   0.431    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      268       262   0.00091  114 3  11 22  0.41    33
                                                     32  0.49    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  219 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.77u 0.11s 25.88t   Elapsed:  00:00:01
  Total cpu time:  25.77u 0.11s 25.88t   Elapsed:  00:00:01
  Start:  Fri May 10 05:46:17 2013   End:  Fri May 10 05:46:18 2013

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_XV000644 hypothetical protein (266 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	268
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	98.32
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.79
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.76
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	95.35
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.66
smart00355	26	ZnF_C2H2 zinc finger.	94.55
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	94.21
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	92.99
PHA00616	44	hypothetical protein	92.28
PHA00733	128	hypothetical protein	92.15
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	90.66
PHA02768	55	hypothetical protein; Provisional	89.23
PHA00732	79	hypothetical protein	82.48
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	81.72
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	80.75

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=98.32  E-value=7.8e-08  Score=87.40  Aligned_cols=69  Identities=23%  Similarity=0.575  Sum_probs=60.9

Q ss_pred             CCCCCCCCCCccccchhhhhhhh-cCcccccccccccCCchhhHhhhhhccccccccCC--cc----Cchhhhccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHV-DINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNVS--HG----KCLADLCGA  143 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~-~~h~wrC~~CgK~F~sE~~LDlHidnrH~~ll~~~--~~----~CLaD~Cd~  143 (268)
                      ...|+.--.-.+|-.-+.|+.|| ..|.+-|.+|+|.|||.+.||.||-|-|+++.+..  |+    .||+|+|..
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGNSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccchhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            34588777778999999999999 88999999999999999999999999999987764  43    899999974

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.79  E-value=0.0005  Score=39.70  Aligned_cols=24  Identities=42%  Similarity=0.848  Sum_probs=20.7

Q ss_pred             cccccccccCCchhhHhhhhhccc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |+|.+|++.|++..-|..|+.+.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999999876

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.76  E-value=0.00048  Score=40.58  Aligned_cols=23  Identities=35%  Similarity=0.833  Sum_probs=21.3

Q ss_pred             cccccccccCCchhhHhhhhhccc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      ++|..|+|.|++...|..||.. |
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~-H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR-H   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH-H
T ss_pred             CCCCCCCCccCCHHHHHHHHhH-C
Confidence            5899999999999999999987 5

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=95.35  E-value=0.0043  Score=56.49  Aligned_cols=34  Identities=32%  Similarity=0.787  Sum_probs=27.8

Q ss_pred             cCcccccccccccCCchhhHhhhhhccccccccC
Q 024416           98 DINEWRCGYCKKSFRAEKFLDQHFDNRHNNLLNV  131 (268)
Q Consensus        98 ~~h~wrC~~CgK~F~sE~~LDlHidnrH~~ll~~  131 (268)
                      +.+.|+|..|+|-|..++|+-+||.|+|.+.|..
T Consensus        74 ~~~K~~C~lc~KlFkg~eFV~KHI~nKH~e~ve~  107 (214)
T PF04959_consen   74 DEDKWRCPLCGKLFKGPEFVRKHIFNKHPEKVEE  107 (214)
T ss_dssp             SSEEEEE-SSS-EESSHHHHHHHHHHH-HHHHHH
T ss_pred             cCCEECCCCCCcccCChHHHHHHHhhcCHHHHHH
Confidence            3467999999999999999999999999998763

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.66  E-value=0.016  Score=35.82  Aligned_cols=23  Identities=35%  Similarity=0.755  Sum_probs=20.5

Q ss_pred             ccccccccccCCchhhHhhhhhc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      ++.|..|+|.|.+|..++.|+..
T Consensus         1 q~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    1 QFYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             -CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCCcccCCCCcCCHHHHHHHHcc
Confidence            47899999999999999999964

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=94.55  E-value=0.021  Score=32.85  Aligned_cols=24  Identities=33%  Similarity=0.797  Sum_probs=21.2

Q ss_pred             cccccccccCCchhhHhhhhhcccc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      ++|..|+|.|.+...|..|+. .|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~-~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMR-THX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHH-Hhc
Confidence            479999999999999999998 554

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=94.21  E-value=0.022  Score=34.57  Aligned_cols=24  Identities=25%  Similarity=0.541  Sum_probs=21.5

Q ss_pred             cccccccccCCchhhHhhhhhccc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      .+|..|++.|.++..|-.|+...|
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhc
Confidence            589999999999999999996554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=92.99  E-value=0.046  Score=32.59  Aligned_cols=22  Identities=41%  Similarity=0.831  Sum_probs=20.3

Q ss_pred             cccccccccCCchhhHhhhhhc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      |.|..|++.|.++..|..|+.-
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            7899999999999999999863

>PHA00616 hypothetical protein

Probab=92.28  E-value=0.049  Score=38.58  Aligned_cols=26  Identities=27%  Similarity=0.517  Sum_probs=23.5

Q ss_pred             cccccccccCCchhhHhhhhhccccc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      .+|+.|||.|.....|..|+-..|..
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~   27 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQ   27 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCC
Confidence            58999999999999999999777764

>PHA00733 hypothetical protein

Probab=92.15  E-value=0.17  Score=42.39  Aligned_cols=51  Identities=25%  Similarity=0.325  Sum_probs=41.2

Q ss_pred             CCCCCCCCCCccccchhhhhhhhc--CcccccccccccCCchhhHhhhhhccccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVD--INEWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~--~h~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      |-.|+..  .-.|......+.|..  .+.+.|..|+|.|.....|..|+...|+-
T Consensus        73 Py~C~~C--gk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733         73 PYVCPLC--LMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             CccCCCC--CCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHHHHHHHHHhcCc
Confidence            4456543  246888888888885  56789999999999999999999999974

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=90.66  E-value=0.12  Score=38.54  Aligned_cols=28  Identities=36%  Similarity=0.930  Sum_probs=23.2

Q ss_pred             ccccccccccCCchhhHhhhhhcc-cccc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDNR-HNNL  128 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidnr-H~~l  128 (268)
                      .|+|.+|++.|.+..-|..||... |...
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~~H~~~   78 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSKHHKKR   78 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHTTTTC-
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCccCCCc
Confidence            599999999999999999999975 5544

>PHA02768 hypothetical protein; Provisional

Probab=89.23  E-value=0.21  Score=36.90  Aligned_cols=24  Identities=17%  Similarity=0.499  Sum_probs=21.8

Q ss_pred             cccccccccCCchhhHhhhhhccc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      ++|.+|||.|.....|-.|+...+
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~   29 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN   29 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC
Confidence            589999999999999999999855

>PHA00732 hypothetical protein

Probab=82.48  E-value=0.82  Score=35.55  Aligned_cols=23  Identities=26%  Similarity=0.374  Sum_probs=11.7

Q ss_pred             ccccccccCCchhhHhhhhhccc
Q 024416          103 RCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus       103 rC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      +|..|||.|.+...|..|+...|
T Consensus         3 ~C~~Cgk~F~s~s~Lk~H~r~~H   25 (79)
T PHA00732          3 KCPICGFTTVTLFALKQHARRNH   25 (79)
T ss_pred             cCCCCCCccCCHHHHHHHhhccc
Confidence            35555555555555555554333

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=81.72  E-value=0.98  Score=32.03  Aligned_cols=27  Identities=30%  Similarity=0.571  Sum_probs=23.0

Q ss_pred             ccccccccccCCchhhHhhhhhcccccc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDNRHNNL  128 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidnrH~~l  128 (268)
                      .++|.|||| -.++.-|-.|+++.|..-
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~   28 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSE   28 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCC
Confidence            578999999 566788999999999863

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=80.75  E-value=0.97  Score=28.58  Aligned_cols=24  Identities=21%  Similarity=0.620  Sum_probs=21.2

Q ss_pred             ccccccccccCCchhhHhhhhhcc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .+.|..|++.|.++..+..|+..+
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHChH
Confidence            578999999999999999998654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	268
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 4e-05
 Identities = 34/214 (15%), Positives = 59/214 (27%), Gaps = 55/214 (25%)

Query: 12  FLLLLFSPQE---ILIQGFDDSASR----TLKQEPGRAHEVHC-SRERSRAAW---GVIE 60
               + S +E   I++     S +     TL  +     +       R    +    +  
Sbjct: 41  MPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT 100

Query: 61  EYLMPFVEQVQYEISSKCRLHPDNDMF------RDQEQHKIHVDINEWR----------- 103
           E   P +    Y I  + RL+ DN +F      R Q   K+   + E R           
Sbjct: 101 EQRQPSMMTRMY-IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVL 159

Query: 104 -CGYCKKS------FRAEKFLDQHFDNRHNNLLNVSHGKC---------LADLCGALHCD 147
             G   K+        + K   +         LN+    C         L  L   +  +
Sbjct: 160 GSG---KTWVALDVCLSYKVQCKMDFKIF--WLNL--KNCNSPETVLEMLQKLLYQIDPN 212

Query: 148 FVMNSKSS---RSKCNPAAVAKNRHLCESLANRC 178
           +   S  S   + + +       R L       C
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	268
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	96.86
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	96.83
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	96.69
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	96.65
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	96.5
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	96.32
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	96.27
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	96.13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	96.13
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	96.13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	96.05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	96.04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	96.03
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	96.0
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	95.97
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	95.92
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	95.9
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	95.9
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	95.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	95.76
1paa_A	30	Yeast transcription factor ADR1; transcription reg	95.73
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	95.65
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	95.6
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	95.6
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	95.55
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	95.54
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	95.48
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	95.48
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	95.46
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	95.4
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	95.39
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	95.35
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	95.35
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	95.35
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	95.32
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	95.29
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.22
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	95.18
1ard_A	29	Yeast transcription factor ADR1; transcription reg	95.17
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	95.17
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	95.15
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	95.13
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.11
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	95.02
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	94.94
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.93
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	94.93
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	94.93
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	94.91
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	94.9
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	94.89
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	94.89
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.84
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	94.82
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	94.73
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	94.73
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	94.72
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	93.69
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.65
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	94.59
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	94.55
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.54
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	94.52
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	94.52
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	94.51
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.51
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	94.5
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	94.5
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	94.49
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	94.49
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	94.49
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	94.48
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	94.47
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	94.46
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.44
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.44
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	94.44
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.41
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	94.41
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.4
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	94.39
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	94.37
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.37
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	94.35
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	94.35
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	93.38
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	94.29
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.28
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	94.25
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.25
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.23
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.23
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	94.22
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	93.26
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	94.21
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	94.19
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	94.19
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	94.17
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.16
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	94.15
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.15
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.14
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.13
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	94.13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	94.12
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.1
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.1
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.1
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	94.09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	94.06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	94.06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	94.04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	94.03
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	94.02
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	94.01
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	94.01
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	94.01
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	94.0
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	93.98
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	93.98
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	93.98
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	93.96
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	93.94
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	93.94
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	93.94
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	93.94
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	93.88
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	93.85
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	93.84
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	93.82
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	93.82
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	93.81
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	93.81
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	93.8
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	93.79
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	93.78
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	93.78
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	93.77
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	93.77
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.77
2epa_A	72	Krueppel-like factor 10; transforming growth facto	93.71
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	93.7
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	93.69
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	93.69
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	93.67
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	93.67
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	93.67
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.66
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	93.62
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	93.62
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	93.61
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	93.6
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	93.56
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	93.55
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	93.54
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	93.51
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	93.5
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	93.5
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	93.48
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	93.46
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	93.42
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	93.33
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	93.33
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	93.3
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	93.3
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	93.29
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	93.29
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	93.27
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	93.22
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	93.2
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	93.12
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	93.11
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	92.95
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	92.92
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	92.86
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	92.86
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	92.84
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	92.76
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	92.69
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	92.66
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	92.47
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	92.46
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	92.44
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	92.42
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	92.37
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	92.33
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	92.32
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	92.18
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	92.17
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	92.04
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	91.95
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	91.3
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	91.08
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	91.05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	90.71
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	90.37
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	90.2
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	90.19
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	89.85
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	89.74
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	89.62
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	89.52
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	88.86
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	88.47
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	88.18
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	87.44
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	87.11
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	86.88
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	86.0
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	85.99
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	85.59
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	84.72
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	83.41
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	83.11
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	82.51
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	81.59
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	81.4
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	80.94
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	80.58
3ax1_A	358	Serrate RNA effector molecule; miRNA processing, p	80.5
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	80.18

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=96.86  E-value=0.00089  Score=44.46  Aligned_cols=51  Identities=25%  Similarity=0.516  Sum_probs=41.0

Q ss_pred             CCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccccc
Q 024416           76 SKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHNNL  128 (268)
Q Consensus        76 ~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~~l  128 (268)
                      -.|+.-  ...|.....++.|...|    .+.|..|+|.|.+...|..|+...|..-
T Consensus         3 ~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            3 FVCEVC--TRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             BCCTTT--CCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCCCC--ccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            356543  35799999999888555    4789999999999999999998888753

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=96.83  E-value=0.00073  Score=44.30  Aligned_cols=48  Identities=21%  Similarity=0.488  Sum_probs=38.2

Q ss_pred             CCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccc
Q 024416           77 KCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        77 ~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      .|+.-  ...|.....++.|...|    .++|.+|+|.|.+...|..|+...|.
T Consensus         3 ~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            3 ICEEC--GIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             BCTTT--CCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             cCCCC--cCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            45443  35788888888888544    48999999999999999999987664

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.69  E-value=0.0009  Score=46.05  Aligned_cols=55  Identities=20%  Similarity=0.428  Sum_probs=44.1

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcCcc----cccccccccCCchhhHhhhhhccccccccC
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDINE----WRCGYCKKSFRAEKFLDQHFDNRHNNLLNV  131 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~h~----wrC~~CgK~F~sE~~LDlHidnrH~~ll~~  131 (268)
                      +-.|+.-  ...|.....++.|...|.    ++|.+|+|.|.+...|..|+...|.....+
T Consensus         9 ~~~C~~C--~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            9 PEKCSEC--SYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             SEECSSS--SCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CeECCCC--CcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            4567653  358999999999886553    899999999999999999999988765443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=96.65  E-value=0.00069  Score=44.43  Aligned_cols=49  Identities=20%  Similarity=0.562  Sum_probs=38.7

Q ss_pred             CCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccc
Q 024416           76 SKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        76 ~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      -.|+.-  ...|.....++.|...|    .++|..|+|.|.+...|..|+...|.
T Consensus         5 ~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            5 RECSYC--GKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             CBCTTT--CCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             ccCCCC--cchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            356653  35799888888887443    48999999999999999999988773

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.50  E-value=0.0011  Score=46.49  Aligned_cols=55  Identities=20%  Similarity=0.407  Sum_probs=43.9

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcCc-------ccccccccccCCchhhHhhhhhccccccccC
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDIN-------EWRCGYCKKSFRAEKFLDQHFDNRHNNLLNV  131 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~h-------~wrC~~CgK~F~sE~~LDlHidnrH~~ll~~  131 (268)
                      +-.|..-  ...|.....++.|...|       .+.|.+|+|.|.+...|..|+...|......
T Consensus         7 ~~~C~~C--~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            7 GLQCEIC--GFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CEECSSS--CCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CeECCCC--CCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            4456653  35899999999888554       4899999999999999999999999865443

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=96.32  E-value=0.0016  Score=46.87  Aligned_cols=50  Identities=22%  Similarity=0.468  Sum_probs=33.7

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      +..|++......|.....++.|...|    .++|..|+|.|.+...|..|+...
T Consensus        45 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   98 (100)
T 2ebt_A           45 PYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH   98 (100)
T ss_dssp             CEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred             CeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHh
Confidence            45666544556777777777776332    467888888888888888877543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.27  E-value=0.004  Score=43.48  Aligned_cols=51  Identities=20%  Similarity=0.345  Sum_probs=41.0

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcCcc----cccccccccCCchhhHhhhhhcccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDINE----WRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~h~----wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      -+-.|+.-  ...|.....++.|...|.    ++|.+|+|.|.+...|..|+...+.
T Consensus        17 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   71 (77)
T 2cot_A           17 RRYKCDEC--GKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG   71 (77)
T ss_dssp             CSSBCSSS--CCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCC
T ss_pred             CCEECCCC--CcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence            35567753  468999999999986653    7899999999999999999976543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=96.13  E-value=0.0017  Score=43.88  Aligned_cols=50  Identities=16%  Similarity=0.430  Sum_probs=39.2

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcC-c-----ccccccccccCCchhhHhhhhhcccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDI-N-----EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~-h-----~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      |-.|+.-  ...|.....++.|... |     .+.|..|+|.|.+...|..|+...|.
T Consensus        10 ~~~C~~C--~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           10 TYRCKVC--SRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEECTTT--CCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ceECCCC--cchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            3456643  3578888888888743 4     37899999999999999999988775

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=96.13  E-value=0.0014  Score=46.31  Aligned_cols=48  Identities=19%  Similarity=0.509  Sum_probs=26.8

Q ss_pred             CCCCCCCCccccchhhhhhhhcC----cccccccccccCCchhhHhhhhhcc
Q 024416           77 KCRLHPDNDMFRDQEQHKIHVDI----NEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        77 ~C~L~P~~D~F~~~E~~k~h~~~----h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|++......|.....++.|...    ..+.|..|+|.|.+...|..|+...
T Consensus         6 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   57 (90)
T 1a1h_A            6 ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   57 (90)
T ss_dssp             ECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             ECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHc
Confidence            45543344556666666555532    2356666666666666666666543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=96.13  E-value=0.0029  Score=47.55  Aligned_cols=49  Identities=20%  Similarity=0.520  Sum_probs=40.7

Q ss_pred             CCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhccccc
Q 024416           77 KCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        77 ~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      .|+.-  ...|.....++.|...|    .+.|.+|+|.|.+...|..|+...|..
T Consensus        30 ~C~~C--gk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           30 LCPVC--GESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             ECTTS--CCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             ECCCC--CCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            35543  35899999999999665    478999999999999999999988863

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=96.05  E-value=0.0034  Score=43.55  Aligned_cols=52  Identities=21%  Similarity=0.400  Sum_probs=41.0

Q ss_pred             ccCCCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccc
Q 024416           73 EISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        73 ~l~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      .-+-.|+.-  ...|.....++.|...|    .++|..|+|.|.+...|..|+...+.
T Consensus        15 ~~~~~C~~C--~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   70 (74)
T 2lce_A           15 DKPYKCDRC--QASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG   70 (74)
T ss_dssp             CCSBCCTTS--SCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred             CCCeECCCC--CceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence            345678754  46899999998888544    37999999999999999999976443

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=96.04  E-value=0.0017  Score=44.67  Aligned_cols=49  Identities=18%  Similarity=0.510  Sum_probs=39.2

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcC----cccccccccccCCchhhHhhhhhc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDI----NEWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~----h~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      +-.|++......|.....++.|...    ..++|..|||.|.+...|..|+..
T Consensus        19 ~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   71 (73)
T 1f2i_G           19 PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT   71 (73)
T ss_dssp             CEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTT
T ss_pred             ccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHh
Confidence            4567765556789998888888744    348999999999999999999854

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=96.03  E-value=0.0015  Score=45.43  Aligned_cols=50  Identities=22%  Similarity=0.421  Sum_probs=30.7

Q ss_pred             CCCCCCCCccccchhhhhhhhcCc----cccccc--ccccCCchhhHhhhhhcccc
Q 024416           77 KCRLHPDNDMFRDQEQHKIHVDIN----EWRCGY--CKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        77 ~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~--CgK~F~sE~~LDlHidnrH~  126 (268)
                      .|+++.....|.....++.|...|    .+.|..  |+|.|.+...|..|+...+.
T Consensus         3 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            3 VCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             cCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            354444455676666666666332    356766  77777777777777755443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.00  E-value=0.0025  Score=44.14  Aligned_cols=51  Identities=18%  Similarity=0.257  Sum_probs=39.8

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      -+-.|+.-  ...|.....++.|...|    .++|..|+|.|.+...|..|+...+.
T Consensus        13 k~~~C~~C--~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   67 (72)
T 1x6e_A           13 KPYGCVEC--GKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS   67 (72)
T ss_dssp             CCEECSSS--CCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred             CCccCCCC--CCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            34567653  36899988888888554    48999999999999999999976543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=95.97  E-value=0.0032  Score=45.06  Aligned_cols=51  Identities=22%  Similarity=0.486  Sum_probs=36.1

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcC------cccccccccccCCchhhHhhhhhccccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDI------NEWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~------h~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      +..|+.-  ...|.....++.|...      ..+.|.+|+|.|.+...|..|+...|..
T Consensus        35 ~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           35 PYSCPVC--GLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             SEECSSS--CCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred             CCcCCCC--CCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCC
Confidence            4566653  3577777777777733      2467888888888888888888777754

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=95.92  E-value=0.005  Score=46.13  Aligned_cols=50  Identities=24%  Similarity=0.385  Sum_probs=35.4

Q ss_pred             CCCCCCCCCccccchhhhhhhhcCc---ccccccccccCCchhhHhhhhhccc
Q 024416           76 SKCRLHPDNDMFRDQEQHKIHVDIN---EWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        76 ~~C~L~P~~D~F~~~E~~k~h~~~h---~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      -.|+..-....|.....++.|...|   .+.|..|+|.|.+...|..|+...+
T Consensus         6 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~   58 (124)
T 1ubd_C            6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHT   58 (124)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTS
T ss_pred             ccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcC
Confidence            3566545556788887777777443   4678888888888888888876544

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=95.90  E-value=0.0028  Score=44.67  Aligned_cols=48  Identities=17%  Similarity=0.377  Sum_probs=26.9

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcC----cccccccccccCCchhhHhhhhh
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDI----NEWRCGYCKKSFRAEKFLDQHFD  122 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~----h~wrC~~CgK~F~sE~~LDlHid  122 (268)
                      +-.|++......|.....++.|...    ..+.|..|+|.|.+...|..|+.
T Consensus        35 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   86 (89)
T 2wbs_A           35 PYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMK   86 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGG
T ss_pred             CcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHH
Confidence            3455554444556666665555532    23566666666666666666654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=95.90  E-value=0.01  Score=43.29  Aligned_cols=51  Identities=24%  Similarity=0.433  Sum_probs=34.0

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      -+-.|+.-  ...|.....++.|...|    .++|.+|+|.|.+...|..|+...+.
T Consensus        44 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   98 (106)
T 2ee8_A           44 RPYTCDIC--HKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ   98 (106)
T ss_dssp             CCCBCSSS--CCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTS
T ss_pred             CCcCCCCc--cchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCC
Confidence            34566653  35677777777777444    36788888888888888888765444

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=95.89  E-value=0.0027  Score=44.14  Aligned_cols=52  Identities=15%  Similarity=0.275  Sum_probs=43.4

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcCcc-ccccc---ccccCCchhhHhhhhhccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDINE-WRCGY---CKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~h~-wrC~~---CgK~F~sE~~LDlHidnrH  125 (268)
                      -+-.|+.+.....|.....++.|...|. ++|..   |+|.|.+...|..|+...|
T Consensus        30 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           30 LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHHSEECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCeeCCCCCCcCccCCHHHHHHHHHHhCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            4567887555678999999999995544 89999   9999999999999998766

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=95.76  E-value=0.0033  Score=46.72  Aligned_cols=42  Identities=24%  Similarity=0.567  Sum_probs=22.7

Q ss_pred             ccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccc
Q 024416           85 DMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        85 D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      ..|.....++.|...|    .++|..|+|.|.+...|..|+...|.
T Consensus        74 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           74 ETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             CEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             CccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCC
Confidence            3555555555555332    25566666666666666666555554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=95.73  E-value=0.0049  Score=34.82  Aligned_cols=25  Identities=28%  Similarity=0.778  Sum_probs=22.0

Q ss_pred             cccccccccCCchhhHhhhhhcccc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      +.|..|||.|.+...|..|+...|.
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~~H~   27 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRHAQKIHS   27 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred             cCCcccCcccCChHHHHHHHHHHcc
Confidence            6899999999999999999766664

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=95.65  E-value=0.0046  Score=34.59  Aligned_cols=25  Identities=24%  Similarity=0.650  Sum_probs=22.3

Q ss_pred             cccccccccCCchhhHhhhhhcccc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      +.|.+|||.|.+...|..|+...|.
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHcc
Confidence            6899999999999999999986654

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.60  E-value=0.0071  Score=44.67  Aligned_cols=54  Identities=22%  Similarity=0.349  Sum_probs=42.9

Q ss_pred             cCCCCCCCCCCcccc-chhhhhhhhcCc-----ccccccccccCCchhhHhhhhhccccccc
Q 024416           74 ISSKCRLHPDNDMFR-DQEQHKIHVDIN-----EWRCGYCKKSFRAEKFLDQHFDNRHNNLL  129 (268)
Q Consensus        74 l~~~C~L~P~~D~F~-~~E~~k~h~~~h-----~wrC~~CgK~F~sE~~LDlHidnrH~~ll  129 (268)
                      -+-.|+.-  ...|. ....++.|...|     .+.|.+|+|.|.+...|..|+...|....
T Consensus        23 ~~~~C~~C--~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A           23 GEAVCPTC--NVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             SCCCCTTT--CCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCcCCCCC--CCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            34577753  35799 888888888544     36999999999999999999998887543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.60  E-value=0.0064  Score=42.41  Aligned_cols=52  Identities=17%  Similarity=0.402  Sum_probs=41.6

Q ss_pred             CCCCCCCCCCccccchhhhhhhhc-Cc-----ccccccccccCCchhhHhhhhhcccccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVD-IN-----EWRCGYCKKSFRAEKFLDQHFDNRHNNL  128 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~-~h-----~wrC~~CgK~F~sE~~LDlHidnrH~~l  128 (268)
                      |-.|+.-  ...|.....++.|.. .|     .++|..|+|.|.+...|..|+...|..-
T Consensus        15 ~~~C~~C--~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A           15 PYECYIC--HARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             SEECTTT--CCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CeECCCc--CchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            4567653  358999999888863 33     4799999999999999999999988754

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=95.55  E-value=0.0071  Score=33.39  Aligned_cols=23  Identities=30%  Similarity=0.782  Sum_probs=20.5

Q ss_pred             cccccccccCCchhhHhhhhhcc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      +.|..|||.|.+...|..|+...
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h   24 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVH   24 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHc
Confidence            57999999999999999998643

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=95.54  E-value=0.0035  Score=46.36  Aligned_cols=53  Identities=19%  Similarity=0.414  Sum_probs=40.7

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      -+-.|++......|.....++.|...|    .+.|..|+|.|.+...|..|+...+.
T Consensus        35 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   91 (119)
T 2jp9_A           35 KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTG   91 (119)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHT
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcC
Confidence            356787655567888888888887443    47899999999999999999876543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=95.48  E-value=0.0038  Score=43.18  Aligned_cols=46  Identities=24%  Similarity=0.427  Sum_probs=26.7

Q ss_pred             CCCCCCCCCccccchhhhhhhhcC----cccccccccccCCchhhHhhhhhc
Q 024416           76 SKCRLHPDNDMFRDQEQHKIHVDI----NEWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus        76 ~~C~L~P~~D~F~~~E~~k~h~~~----h~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      -.|+.-  ...|.....++.|...    ..++|..|+|.|.+...|..|+..
T Consensus        30 ~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A           30 YPCQYC--GKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             EECSSS--CCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             eeCCcC--ChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            345442  2456666666666532    236666777777776666666654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.48  E-value=0.006  Score=42.27  Aligned_cols=51  Identities=22%  Similarity=0.440  Sum_probs=42.1

Q ss_pred             CCCCCCCCCCccccchhhhhhhhc-Cc----cccccc--ccccCCchhhHhhhhhccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVD-IN----EWRCGY--CKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~-~h----~wrC~~--CgK~F~sE~~LDlHidnrH  125 (268)
                      +..|..+-....|.....++.|.. .|    .+.|..  |+|.|.+...|..|+...+
T Consensus         7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~   64 (79)
T 2dlk_A            7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHS   64 (79)
T ss_dssp             SEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhC
Confidence            456887767779999999888875 44    479999  9999999999999997544

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=95.46  E-value=0.0039  Score=46.02  Aligned_cols=53  Identities=17%  Similarity=0.377  Sum_probs=38.5

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHNNL  128 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~~l  128 (268)
                      -+..|+.-  ...|.....++.|...|    .+.|.+|+|.|.+...|..|+...|...
T Consensus        36 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   92 (110)
T 2csh_A           36 RPYGCGVC--GKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKSY   92 (110)
T ss_dssp             CSEECTTT--SCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHHHH
T ss_pred             cCccCCCC--CcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHccccc
Confidence            34567653  35788888888777554    3678888888888888888888777654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=95.40  E-value=0.012  Score=41.97  Aligned_cols=39  Identities=18%  Similarity=0.451  Sum_probs=21.2

Q ss_pred             ccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhc
Q 024416           85 DMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus        85 D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      ..|.....++.|...|    .+.|..|+|.|.+...|..|+..
T Consensus        16 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   58 (96)
T 2dmd_A           16 KCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI   58 (96)
T ss_dssp             BCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHH
Confidence            3555555555555333    24566666666666666666544

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=95.39  E-value=0.0054  Score=43.27  Aligned_cols=51  Identities=16%  Similarity=0.374  Sum_probs=40.8

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      -+..|+.-  ...|.....++.|...|    .+.|..|+|.|.+...|..|+...+.
T Consensus        33 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~   87 (90)
T 1a1h_A           33 KPFQCRIC--MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLR   87 (90)
T ss_dssp             CCEECTTT--CCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC
T ss_pred             CCccCCCC--CcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            44578764  36899999998888543    48999999999999999999986543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=95.35  E-value=0.011  Score=44.83  Aligned_cols=54  Identities=24%  Similarity=0.295  Sum_probs=43.0

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhc--CcccccccccccCCchhhHhhhhhccccccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVD--INEWRCGYCKKSFRAEKFLDQHFDNRHNNLL  129 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~--~h~wrC~~CgK~F~sE~~LDlHidnrH~~ll  129 (268)
                      -|-.|+.-  ...|.....++.|..  ...+.|.+|||.|.+...|..|+...|...+
T Consensus        73 ~~~~C~~C--~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~v  128 (129)
T 2wbt_A           73 SQFVCPLC--LMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKKHNICV  128 (129)
T ss_dssp             CSEECTTT--CCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHHHHHTTCCCC
T ss_pred             CCeECCCC--CcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHHHHHHCCccC
Confidence            34567753  367988888888885  4568999999999999999999998887643

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=95.35  E-value=0.0087  Score=42.79  Aligned_cols=53  Identities=19%  Similarity=0.369  Sum_probs=42.7

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHNNL  128 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~~l  128 (268)
                      -+-.|+.-  ...|.....++.|...|    .++|..|+|.|.+...|..|+...|..-
T Consensus        35 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   91 (96)
T 2dmd_A           35 KPYKCKTC--DYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDS   91 (96)
T ss_dssp             CSEECSSS--CCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCC
T ss_pred             CCEeCCCC--CCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            35567654  36899999999988544    4899999999999999999998877653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=95.35  E-value=0.012  Score=42.88  Aligned_cols=51  Identities=22%  Similarity=0.417  Sum_probs=40.5

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      -+..|+.-  ...|.....++.|...|    .++|..|+|.|.+...|..|+...+.
T Consensus        16 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   70 (106)
T 2ee8_A           16 KEFICKFC--GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSK   70 (106)
T ss_dssp             CCCBCSSS--CCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCC
T ss_pred             cCeECCCC--CCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCC
Confidence            34567764  46899999988888443    48999999999999999999876544

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=95.32  E-value=0.011  Score=35.27  Aligned_cols=29  Identities=24%  Similarity=0.534  Sum_probs=24.2

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.+.|.+|+|.|.+...|..|+...
T Consensus         6 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   34 (37)
T 1p7a_A            6 STGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCCCCccCCCCCcccCcHHHHHHHHHHh
Confidence            44445689999999999999999998654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.29  E-value=0.012  Score=42.02  Aligned_cols=41  Identities=24%  Similarity=0.298  Sum_probs=33.6

Q ss_pred             CccccchhhhhhhhcC-cc------------cccccccccCCchhhHhhhhhcc
Q 024416           84 NDMFRDQEQHKIHVDI-NE------------WRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        84 ~D~F~~~E~~k~h~~~-h~------------wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      ...|.....++.|... |.            +.|..|+|.|.+...|..|+...
T Consensus        32 ~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H   85 (95)
T 2ej4_A           32 DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH   85 (95)
T ss_dssp             CCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHH
T ss_pred             ccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhc
Confidence            4589988888888743 43            78999999999999999998753

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.22  E-value=0.0051  Score=37.35  Aligned_cols=32  Identities=22%  Similarity=0.373  Sum_probs=25.0

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      |...-.+.|..|||.|.+...|..|+...|..
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            44445689999999999999999995455643

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=95.18  E-value=0.0054  Score=43.86  Aligned_cols=48  Identities=21%  Similarity=0.490  Sum_probs=34.8

Q ss_pred             CCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccc
Q 024416           77 KCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        77 ~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      .|+.-  ...|.....++.|...|    .+.|..|+|.|.+...|..|+...|.
T Consensus         5 ~C~~C--~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            5 QCRIC--MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             ECTTT--CCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             cCCCC--CCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence            45543  35677777777776443    47888888888888888888887773

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=95.17  E-value=0.0089  Score=33.31  Aligned_cols=23  Identities=22%  Similarity=0.775  Sum_probs=20.9

Q ss_pred             cccccccccCCchhhHhhhhhcc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      +.|..|||.|.+...|..|+...
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYRSH   25 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             eECCCCCcccCCHHHHHHHHHHh
Confidence            68999999999999999998754

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=95.17  E-value=0.0089  Score=35.23  Aligned_cols=28  Identities=14%  Similarity=0.398  Sum_probs=23.6

Q ss_pred             CcccccccccccCCchhhHhhhhhcccc
Q 024416           99 INEWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        99 ~h~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      ...+.|.+|||.|.+...|..|+...+.
T Consensus         5 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            5 KRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            4458999999999999999999876443

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=95.15  E-value=0.0069  Score=43.27  Aligned_cols=51  Identities=18%  Similarity=0.419  Sum_probs=40.5

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhccccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      +-.|+.-  ...|.....++.|...|    .+.|..|+|.|.+...|..|+...|..
T Consensus         7 ~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   61 (95)
T 2yt9_A            7 GVACEIC--GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS   61 (95)
T ss_dssp             CEECSSS--CCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCC
T ss_pred             CeECCCC--CCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCC
Confidence            3456653  36899888888888554    489999999999999999999876653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=95.13  E-value=0.0076  Score=33.72  Aligned_cols=23  Identities=26%  Similarity=0.470  Sum_probs=20.7

Q ss_pred             cccccccccCCchhhHhhhhhcc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      +.|..|||.|.+...|..|+...
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHILLH   25 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHHTGG
T ss_pred             ccCCCCCchhCCHHHHHHHHHHh
Confidence            58999999999999999998653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.11  E-value=0.0078  Score=35.94  Aligned_cols=31  Identities=23%  Similarity=0.603  Sum_probs=25.3

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      |.....+.|..|||.|.+...|..|+...+.
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            3344568999999999999999999976543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=95.02  E-value=0.012  Score=45.57  Aligned_cols=66  Identities=21%  Similarity=0.366  Sum_probs=45.6

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcCc----cccccc--ccccCCchhhHhhhhhccccccccCCccCchhhhcc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGY--CKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCG  142 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~--CgK~F~sE~~LDlHidnrH~~ll~~~~~~CLaD~Cd  142 (268)
                      -+-.|++......|.....++.|...|    .+.|..  |+|.|.+...|..|+...|..-   ..-.|-..+|+
T Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~---~~~~C~~~~C~  137 (155)
T 2gli_A           66 KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE---KPYVCKLPGCT  137 (155)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSC---CCEECCSTTTC
T ss_pred             CCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCC---CCeeCCCCCCc
Confidence            456777755667888888888887443    378887  8888888888888887777532   22345444454

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=94.94  E-value=0.013  Score=40.94  Aligned_cols=52  Identities=21%  Similarity=0.457  Sum_probs=39.9

Q ss_pred             CCCCCCCCCCccccchhhhhhhhc-Cc-------ccccccccccCCchhhHhhhhhcccccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVD-IN-------EWRCGYCKKSFRAEKFLDQHFDNRHNNL  128 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~-~h-------~wrC~~CgK~F~sE~~LDlHidnrH~~l  128 (268)
                      +-.|+.-  ...|.....++.|.. .|       .++|..|+|.|.+...|..|+...|...
T Consensus        15 ~~~C~~C--~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   74 (86)
T 1x6h_A           15 PYACSHC--DKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPD   74 (86)
T ss_dssp             CEECSSS--SCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCC
T ss_pred             CCcCCCC--CCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCC
Confidence            4456653  357888888888872 22       3889999999999999999998877754

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=94.93  E-value=0.0094  Score=34.89  Aligned_cols=28  Identities=25%  Similarity=0.501  Sum_probs=23.7

Q ss_pred             CcccccccccccCCchhhHhhhhhcccc
Q 024416           99 INEWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        99 ~h~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      .-.+.|..|||.|.+...|..|+...+.
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            5 SSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            3457999999999999999999976543

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=94.93  E-value=0.0054  Score=40.41  Aligned_cols=30  Identities=23%  Similarity=0.430  Sum_probs=24.4

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|..|||.|.+...|..|+...+
T Consensus        19 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   48 (54)
T 1yui_A           19 SQSEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             HTSSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCccCCCCCcccCCHHHHHHHHHHhc
Confidence            334456899999999999999999987543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=94.93  E-value=0.0094  Score=33.23  Aligned_cols=24  Identities=25%  Similarity=0.713  Sum_probs=21.2

Q ss_pred             ccccccccccCCchhhHhhhhhcc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .+.|..|||.|.+...|..|+...
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h   26 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETH   26 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTT
T ss_pred             CccCCCCCcccCCHHHHHHHHHHh
Confidence            368999999999999999998653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=94.91  E-value=0.0094  Score=32.96  Aligned_cols=23  Identities=26%  Similarity=0.530  Sum_probs=20.7

Q ss_pred             cccccccccCCchhhHhhhhhcc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      +.|.+|||.|.+...|..|+...
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 2m0e_A            3 HKCPHCDKKFNQVGNLKAHLKIH   25 (29)
T ss_dssp             CCCSSCCCCCCTTTHHHHHHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHHHh
Confidence            68999999999999999998654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=94.90  E-value=0.0084  Score=33.43  Aligned_cols=23  Identities=17%  Similarity=0.508  Sum_probs=20.5

Q ss_pred             ccccccccccCCchhhHhhhhhc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      .+.|..|||.|.+...|..|+..
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCCcChhhCCHHHHHHHHHH
Confidence            36899999999999999999853

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=94.89  E-value=0.0067  Score=41.90  Aligned_cols=48  Identities=21%  Similarity=0.499  Sum_probs=37.5

Q ss_pred             CCCCCCCCccccchhhhhhhhcC----cccccccccccCCchhhHhhhhhcccc
Q 024416           77 KCRLHPDNDMFRDQEQHKIHVDI----NEWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        77 ~C~L~P~~D~F~~~E~~k~h~~~----h~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      .|+.-  ...|.....++.|...    ..+.|..|+|.|.+...|..|+...+.
T Consensus         3 ~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (82)
T 2kmk_A            3 DCKIC--GKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG   54 (82)
T ss_dssp             ECSSS--CCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHT
T ss_pred             cCCCC--cccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcC
Confidence            35443  3578888888888743    458999999999999999999986554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=94.89  E-value=0.0093  Score=33.29  Aligned_cols=23  Identities=22%  Similarity=0.674  Sum_probs=20.6

Q ss_pred             ccccccccccCCchhhHhhhhhc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      .+.|..|||.|.+...|..|+..
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~   25 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRV   25 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTT
T ss_pred             CccCCCCCcccCCHHHHHHHHHh
Confidence            36899999999999999999864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.84  E-value=0.015  Score=36.41  Aligned_cols=30  Identities=23%  Similarity=0.358  Sum_probs=24.8

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|..|+|.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ep1_A            7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHT   36 (46)
T ss_dssp             CSSCCSSCCSSSCCCCSSHHHHHHHHGGGS
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHhC
Confidence            444556899999999999999999997643

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.82  E-value=0.014  Score=35.80  Aligned_cols=29  Identities=24%  Similarity=0.407  Sum_probs=24.2

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|||.|.+...|..|+...
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   34 (42)
T 2ytb_A            6 SGGEKPYRCDQCGKAFSQKGSLIVHIRVH   34 (42)
T ss_dssp             CCSCCSBCCTTTTCCBSSHHHHHTTGGGT
T ss_pred             cCCCCCeeCCCccchhCCHHHHHHHHHHh
Confidence            44445689999999999999999998654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=94.73  E-value=0.019  Score=42.46  Aligned_cols=39  Identities=21%  Similarity=0.320  Sum_probs=19.0

Q ss_pred             cccchhhhhhhhcC----cccccccccccCCchhhHhhhhhcc
Q 024416           86 MFRDQEQHKIHVDI----NEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        86 ~F~~~E~~k~h~~~----h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|.....++.|...    ..++|..|+|.|.+...|..|+...
T Consensus        16 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~   58 (124)
T 2dlq_A           16 KFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARN   58 (124)
T ss_dssp             CCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHC
T ss_pred             cCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhh
Confidence            45555555444422    2345555555555555555555443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.73  E-value=0.024  Score=42.06  Aligned_cols=52  Identities=15%  Similarity=0.153  Sum_probs=37.7

Q ss_pred             CCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhccccc
Q 024416           76 SKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        76 ~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      ..|+.-+..=.|.....++.|...|    .+.|.+|+|.|.+...|..|+...|..
T Consensus        51 ~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           51 ETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             CCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             ccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence            3466544221236667777776544    589999999999999999999887764

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=94.72  E-value=0.013  Score=35.95  Aligned_cols=30  Identities=23%  Similarity=0.418  Sum_probs=24.8

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|.+|||.|.+...|..|+...+
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   34 (42)
T 2el5_A            5 SSGENPYECSECGKAFNRKDQLISHQRTHA   34 (42)
T ss_dssp             SSSCCSEECSSSCCEESSHHHHHHHHGGGC
T ss_pred             CCCCCCccCCCcChhhCCHHHHHHHHHhcC
Confidence            444556899999999999999999997644

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=93.69  E-value=0.0057  Score=33.88  Aligned_cols=22  Identities=27%  Similarity=0.594  Sum_probs=20.0

Q ss_pred             cccccccccCCchhhHhhhhhc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      +.|..|||.|.+...|..|+..
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            3 YVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            6899999999999999999854

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.65  E-value=0.019  Score=36.09  Aligned_cols=30  Identities=20%  Similarity=0.430  Sum_probs=24.6

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|..|||.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2ytn_A            7 GTGKKPYKCNECGKVFTQNSHLARHRGIHT   36 (46)
T ss_dssp             CSCCSSCBCTTTCCBCSSHHHHHHHGGGTS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHhhhcC
Confidence            444556899999999999999999986543

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.59  E-value=0.015  Score=35.68  Aligned_cols=30  Identities=27%  Similarity=0.379  Sum_probs=24.4

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|.+|+|.|.+...|..|+...+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   34 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHT   34 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhC
Confidence            334456899999999999999999986543

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.55  E-value=0.018  Score=36.04  Aligned_cols=31  Identities=23%  Similarity=0.277  Sum_probs=25.0

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhccc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      .|...-.+.|..|||.|.+...|..|+...+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eq4_A            6 SGTGEKLYNCKECGKSFSRAPCLLKHERLHS   36 (46)
T ss_dssp             CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCC
T ss_pred             cCCCCCCeECCCCCCccCchHHHHHHHHhcC
Confidence            3444456899999999999999999986543

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.54  E-value=0.016  Score=36.49  Aligned_cols=31  Identities=23%  Similarity=0.378  Sum_probs=25.2

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhccc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      .|.....+.|..|+|.|.+...|..|+...+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2en9_A            6 SGAGKKLFKCNECKKTFTQSSSLTVHQRIHT   36 (46)
T ss_dssp             SCCSSCCCBCTTTCCBCSSHHHHHHHHHHHT
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHcC
Confidence            3444556899999999999999999987543

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.52  E-value=0.017  Score=36.29  Aligned_cols=31  Identities=23%  Similarity=0.273  Sum_probs=25.2

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhccc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      .|.....+.|..|+|.|.+...|..|+...+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2epz_A            6 SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHT   36 (46)
T ss_dssp             SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTT
T ss_pred             CcCCCCCeECCCCCceeCCHHHHHHHHHHhC
Confidence            3444556899999999999999999986543

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.52  E-value=0.018  Score=35.54  Aligned_cols=28  Identities=25%  Similarity=0.584  Sum_probs=23.7

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      |...-.+.|..|||.|.+...|..|+..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (44)
T 2en7_A            7 GTGMKPYVCNECGKAFRSKSYLIIHTRT   34 (44)
T ss_dssp             SSSSSSSCCTTTCCCCSSHHHHHHHHTT
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHhhh
Confidence            4445568999999999999999999954

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=94.51  E-value=0.014  Score=41.06  Aligned_cols=47  Identities=23%  Similarity=0.494  Sum_probs=37.1

Q ss_pred             CCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccc
Q 024416           77 KCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        77 ~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      .|..-  ...|.....++.|..+|    .+.|.+|||.|.....|..|+. -|.
T Consensus         6 ~C~~C--~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~-~Ht   56 (60)
T 4gzn_C            6 FCNFC--GKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLK-VHQ   56 (60)
T ss_dssp             ECTTT--CCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGG-GGS
T ss_pred             cCCCC--CCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhC-ccC
Confidence            45442  35899888888888555    4899999999999999999986 454

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.51  E-value=0.019  Score=36.10  Aligned_cols=29  Identities=24%  Similarity=0.306  Sum_probs=24.1

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2emg_A            7 GTGENPFICSECGKVFTHKTNLIIHQKIH   35 (46)
T ss_dssp             CCSCCSCBCTTTCCBCSSHHHHHHHHTTT
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHh
Confidence            33445689999999999999999998653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=94.50  E-value=0.015  Score=45.08  Aligned_cols=53  Identities=17%  Similarity=0.371  Sum_probs=43.8

Q ss_pred             cCCCCCCCCCCccccchhhhhhhh-cCc----cccccc--ccccCCchhhHhhhhhcccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHV-DIN----EWRCGY--CKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~-~~h----~wrC~~--CgK~F~sE~~LDlHidnrH~  126 (268)
                      -+-.|+.......|.....++.|. ..|    .+.|..  |+|.|.+...|..|+...|.
T Consensus        96 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           96 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            456788755567899999988887 555    389998  99999999999999998774

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.50  E-value=0.018  Score=35.41  Aligned_cols=30  Identities=20%  Similarity=0.390  Sum_probs=24.4

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|..|||.|.+...|..|+...+
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   35 (42)
T 2eos_A            6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHT   35 (42)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHTTTTS
T ss_pred             cCCCCCEECCCCCCccCCHHHHHHHHHhcC
Confidence            334456899999999999999999987543

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=94.49  E-value=0.012  Score=33.10  Aligned_cols=23  Identities=17%  Similarity=0.537  Sum_probs=20.3

Q ss_pred             ccccccccccCCchhhHhhhhhc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      .+.|..|||.|.....|..|+..
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTT
T ss_pred             CcCCCCCCcccCCHHHHHHHHHh
Confidence            36899999999999999999853

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=94.49  E-value=0.026  Score=41.53  Aligned_cols=50  Identities=20%  Similarity=0.317  Sum_probs=32.3

Q ss_pred             CCCCCCCCCCccccchhhhhhhhc---CcccccccccccCCchhhHhhhhhcccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVD---INEWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~---~h~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      +-.|+.-  ...|.....++.|..   ...+.|.+|+|.|.+...|..|+...|.
T Consensus        42 ~~~C~~C--~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   94 (107)
T 1wjp_A           42 AAVCPYC--SLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN   94 (107)
T ss_dssp             SBCCTTT--CCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred             CccCCCC--CCccCCHHHHHHHHHcCCCCCccCccccchhCCHHHHHHHHHHHcC
Confidence            3456543  246666666666652   2336788888888888888888776665

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=94.49  E-value=0.025  Score=44.01  Aligned_cols=57  Identities=19%  Similarity=0.388  Sum_probs=37.0

Q ss_pred             ccccchhhhhhhhcCc----cccccc--ccccCCchhhHhhhhhccccccccCCccCchhhhccccc
Q 024416           85 DMFRDQEQHKIHVDIN----EWRCGY--CKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALH  145 (268)
Q Consensus        85 D~F~~~E~~k~h~~~h----~wrC~~--CgK~F~sE~~LDlHidnrH~~ll~~~~~~CLaD~Cd~L~  145 (268)
                      ..|.....++.|...|    .+.|..  |+|.|.+...|..|+...+..    ..-.|-.+.|+...
T Consensus        70 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~----~~~~C~~~~C~k~f  132 (155)
T 2rpc_A           70 KSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGE----KPFKCEFEGCDRRF  132 (155)
T ss_dssp             CCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSS----CSBCCSSTTCCCCB
T ss_pred             cccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCC----CCccCCCCCCCCcc
Confidence            4677777777776443    377877  888888888888887644332    22356555566544

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.48  E-value=0.019  Score=35.93  Aligned_cols=29  Identities=24%  Similarity=0.255  Sum_probs=24.3

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.+.|..|||.|.+...|..|+...
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eop_A            7 GTGEKPHECRECGKSFSFNSQLIVHQRIH   35 (46)
T ss_dssp             CCCCCSCBCTTTCCBCSSHHHHHHHHTTT
T ss_pred             cCCCCCeeCCCCCchhCCHHHHHHHHHHc
Confidence            44455689999999999999999998763

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.47  E-value=0.022  Score=35.74  Aligned_cols=30  Identities=20%  Similarity=0.359  Sum_probs=24.6

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|.....+.|..|+|.|.+...|..|+...
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eq2_A            6 SGTGGKPYQCNECGKAFSQTSKLARHQRVH   35 (46)
T ss_dssp             SSSSSCSSSCCSSCCCCSSHHHHHHHGGGG
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHc
Confidence            344455689999999999999999998653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=94.46  E-value=0.022  Score=40.00  Aligned_cols=51  Identities=16%  Similarity=0.407  Sum_probs=41.9

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcCcc----cccc--cccccCCchhhHhhhhhccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDINE----WRCG--YCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~h~----wrC~--~CgK~F~sE~~LDlHidnrH  125 (268)
                      +-.|+++-....|.....++.|...|.    +.|.  .|+|.|.+...|..|+...+
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   61 (89)
T 2wbs_A            5 THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT   61 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHH
T ss_pred             CeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcC
Confidence            456888767789999999999986554    7997  59999999999999996544

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.44  E-value=0.019  Score=36.05  Aligned_cols=29  Identities=21%  Similarity=0.441  Sum_probs=24.0

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.++|.+|+|.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2yti_A            7 GTGEKPYKCNECGKVFTQNSHLARHRGIH   35 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTTT
T ss_pred             CCCCcCeECCCCCcccCChhHHHHHhHhc
Confidence            33445689999999999999999998643

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.44  E-value=0.019  Score=33.90  Aligned_cols=27  Identities=22%  Similarity=0.353  Sum_probs=22.9

Q ss_pred             cCcccccccccccCCchhhHhhhhhcc
Q 024416           98 DINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        98 ~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      ....+.|..|+|.|.+...|..|+...
T Consensus         6 ~~~~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elr_A            6 SGKTHLCDMCGKKFKSKGTLKSHKLLH   32 (36)
T ss_dssp             CCSSCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             CCCCeecCcCCCCcCchHHHHHHHHHh
Confidence            345689999999999999999998653

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=94.44  E-value=0.017  Score=36.43  Aligned_cols=31  Identities=19%  Similarity=0.357  Sum_probs=25.3

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhccc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      +|.....+.|..|||.|.+...|..|+...+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ely_A            6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHT   36 (46)
T ss_dssp             CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHS
T ss_pred             CCCCCCCcccCccCcccCCHHHHHHHHHHcC
Confidence            3444556899999999999999999987643

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.41  E-value=0.016  Score=36.48  Aligned_cols=31  Identities=19%  Similarity=0.326  Sum_probs=25.2

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhccc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      .|...-.+.|..|||.|.+...|..|+...+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emf_A            6 SGTGGKHFECTECGKAFTRKSTLSMHQKIHT   36 (46)
T ss_dssp             SSSSSCCEECSSSCCEESCHHHHHHHGGGTS
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHHHHhC
Confidence            3444556899999999999999999997543

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.41  E-value=0.021  Score=35.98  Aligned_cols=30  Identities=20%  Similarity=0.492  Sum_probs=24.8

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|..|||.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytq_A            7 GAGEKPYGCSECGKAFSSKSYLIIHMRTHS   36 (46)
T ss_dssp             SSCCCSCBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred             cCCCCCcCCCccChhhCChHHHHHHHHHhC
Confidence            444556899999999999999999987643

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.40  E-value=0.019  Score=35.91  Aligned_cols=30  Identities=20%  Similarity=0.402  Sum_probs=24.6

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|..|||.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytr_A            7 GTGEKPYKCNECGKAFSQTSKLARHQRIHT   36 (46)
T ss_dssp             CSSCCTTCCTTTCCCCSSHHHHHHHHTTTT
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhcC
Confidence            444556899999999999999999986543

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.39  E-value=0.02  Score=35.96  Aligned_cols=30  Identities=27%  Similarity=0.434  Sum_probs=24.7

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|...-.+.|..|+|.|.+...|..|+...
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eq1_A            6 SGTGEKPYKCNECGKAFRAHSNLTTHQVIH   35 (46)
T ss_dssp             CCCCSCCCCCTTTTCCCSSHHHHHHHHTTT
T ss_pred             ccCCCCCeECCcCChhhCCHHHHHHHHHHh
Confidence            344455689999999999999999998753

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.37  E-value=0.02  Score=35.88  Aligned_cols=31  Identities=23%  Similarity=0.402  Sum_probs=25.3

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      |...-.+.|..|||.|.+...|..|+...|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   37 (47)
T 2epx_A            7 GTGKKPYECIECGKAFIQNTSLIRHWRYYHT   37 (47)
T ss_dssp             CCCCCSBCCSSSCCCBSSHHHHHHHHTTTTT
T ss_pred             cCCCCCEECCccCchhCChHHHHHHhHhhcC
Confidence            3344568999999999999999999984554

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.37  E-value=0.021  Score=35.88  Aligned_cols=29  Identities=21%  Similarity=0.411  Sum_probs=24.1

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|+|.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2enf_A            7 GTGEKPYKCNECGKVFTQNSHLVRHRGIH   35 (46)
T ss_dssp             CCCCCSCBCSSSCCBCSSHHHHHHHHTTT
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHhh
Confidence            34445689999999999999999998653

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=94.35  E-value=0.015  Score=35.58  Aligned_cols=30  Identities=27%  Similarity=0.389  Sum_probs=24.6

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|.+|||.|.+...|..|+...+
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   35 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCS   35 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhhhcC
Confidence            334456899999999999999999986543

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.35  E-value=0.022  Score=34.87  Aligned_cols=29  Identities=24%  Similarity=0.440  Sum_probs=24.2

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|||.|.+...|..|+...
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   33 (42)
T 2yte_A            5 SSGEKPYSCAECKETFSDNNRLVQHQKMH   33 (42)
T ss_dssp             SCSCCSCBCTTTCCBCSSHHHHHHHHHHT
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHh
Confidence            44445689999999999999999998753

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=93.38  E-value=0.0074  Score=33.91  Aligned_cols=25  Identities=20%  Similarity=0.457  Sum_probs=21.4

Q ss_pred             ccccccccccCCchhhHhhhhhccc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      .+.|.+|||.|.+...|..|+...+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            3689999999999999999986543

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=94.29  E-value=0.019  Score=35.98  Aligned_cols=29  Identities=21%  Similarity=0.447  Sum_probs=24.2

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2el4_A            7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSH   35 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHGGGS
T ss_pred             CCCCCceECCCCCchhCCHHHHHHHHHHh
Confidence            44445689999999999999999998653

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.28  E-value=0.017  Score=36.29  Aligned_cols=30  Identities=23%  Similarity=0.361  Sum_probs=24.6

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|.....+.|..|||.|.+...|..|+...
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ep3_A            6 SGTGEKPYRCAECGKAFTDRSNLFTHQKIH   35 (46)
T ss_dssp             SSSCCCSEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHc
Confidence            344455689999999999999999999653

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=94.25  E-value=0.026  Score=35.42  Aligned_cols=29  Identities=21%  Similarity=0.503  Sum_probs=24.2

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.+.|..|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2em0_A            7 GMGEKTWKCRECDMCFSQASSLRLHQNVH   35 (46)
T ss_dssp             SCCCCCCCCSSSCCCCSSHHHHHHHGGGG
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHc
Confidence            34445689999999999999999998763

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.25  E-value=0.023  Score=35.90  Aligned_cols=30  Identities=27%  Similarity=0.512  Sum_probs=24.7

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|.....++|..|+|.|.+...|..|+...
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVH   35 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSSHHHHHHHTTTT
T ss_pred             CCCCCcccCCCCCCcccCcHHHHHHHHHhc
Confidence            344455689999999999999999998653

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=94.23  E-value=0.019  Score=36.09  Aligned_cols=31  Identities=23%  Similarity=0.401  Sum_probs=25.3

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhccc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      .|.....+.|..|||.|.+...|..|+...+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ema_A            6 SGTGEKRYKCNECGKVFSRNSQLSQHQKIHT   36 (46)
T ss_dssp             SCTTSCCEECSSSCCEESSHHHHHHHHTGGG
T ss_pred             CCCCCcCcCCCCCcchhCCHHHHHHHHHhcC
Confidence            3444556899999999999999999987643

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.23  E-value=0.019  Score=36.03  Aligned_cols=30  Identities=20%  Similarity=0.391  Sum_probs=24.9

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....++|..|||.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eml_A            7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHS   36 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHGGGS
T ss_pred             cCCCCCeeCCCcCCccCCHHHHHHHHHHhc
Confidence            444556899999999999999999987644

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=94.22  E-value=0.019  Score=42.38  Aligned_cols=52  Identities=15%  Similarity=0.354  Sum_probs=42.6

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcC----cccccc--cccccCCchhhHhhhhhcccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDI----NEWRCG--YCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~----h~wrC~--~CgK~F~sE~~LDlHidnrH~  126 (268)
                      +-.|+++-....|.....++.|...    ..++|.  .|+|.|.+...|..|+...+.
T Consensus         6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   63 (119)
T 2jp9_A            6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG   63 (119)
T ss_dssp             CBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHC
T ss_pred             eeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCC
Confidence            4578876666789999999888844    358999  699999999999999987543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=93.26  E-value=0.0082  Score=33.81  Aligned_cols=23  Identities=26%  Similarity=0.496  Sum_probs=20.4

Q ss_pred             cccccccccCCchhhHhhhhhcc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      +.|.+|||.|.+...|..|+...
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2lvt_A            3 CQCVMCGKAFTQASSLIAHVRQH   25 (29)
Confidence            58999999999999999998643

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=94.21  E-value=0.046  Score=44.01  Aligned_cols=53  Identities=23%  Similarity=0.412  Sum_probs=42.9

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcCcc----ccccc--ccccCCchhhHhhhhhccccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDINE----WRCGY--CKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~h~----wrC~~--CgK~F~sE~~LDlHidnrH~~  127 (268)
                      -+-.|++.-....|.....++.|...|.    +.|..  |+|.|.+...|..|+.. |..
T Consensus       103 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~-H~~  161 (190)
T 1tf6_A          103 CVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HAG  161 (190)
T ss_dssp             SCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTS-SCS
T ss_pred             ceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHH-hCC
Confidence            3457766656679999999999986654    89988  99999999999999975 443

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=94.19  E-value=0.038  Score=42.90  Aligned_cols=64  Identities=22%  Similarity=0.267  Sum_probs=45.1

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcC-cc------------cccccccccCCchhhHhhhhhccccccccCCccCchhhh
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDI-NE------------WRCGYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADL  140 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~-h~------------wrC~~CgK~F~sE~~LDlHidnrH~~ll~~~~~~CLaD~  140 (268)
                      .+..|+.-  ...|.....++.|... |.            +.|..|+|.|.+...|..|+...+..    ..-.|-.+.
T Consensus        24 ~~~~C~~C--~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~~~   97 (155)
T 2rpc_A           24 LSRPKKSC--DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE----KPFPCPFPG   97 (155)
T ss_dssp             CSSSCCCC--CCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCC----CSEECSCTT
T ss_pred             cccccccC--CcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCC----CcccCCcCC
Confidence            34455543  3589999999999843 43            58999999999999999999865432    223555555


Q ss_pred             ccc
Q 024416          141 CGA  143 (268)
Q Consensus       141 Cd~  143 (268)
                      |+.
T Consensus        98 C~~  100 (155)
T 2rpc_A           98 CGK  100 (155)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            553

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.19  E-value=0.02  Score=35.80  Aligned_cols=30  Identities=20%  Similarity=0.389  Sum_probs=24.6

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....++|..|||.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eq3_A            7 GTGEKPYECNQCGKAFSVRSSLTTHQAIHT   36 (46)
T ss_dssp             SCCCCSSEETTTTEECSSHHHHHHHHTTSC
T ss_pred             CCCCCCeECCCCChhhCCHHHHHHHHHHhC
Confidence            444556899999999999999999986543

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.17  E-value=0.018  Score=36.06  Aligned_cols=29  Identities=31%  Similarity=0.538  Sum_probs=24.2

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|+|.|.+...|..|+...
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yrj_A            7 GTGEKPYRCGECGKAFAQKANLTQHQRIH   35 (46)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHc
Confidence            44455689999999999999999998653

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.16  E-value=0.027  Score=35.44  Aligned_cols=31  Identities=23%  Similarity=0.423  Sum_probs=25.1

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhccc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      .|...-.+.|..|+|.|.+...|..|+...+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHS   36 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhC
Confidence            3444556899999999999999999987543

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.15  E-value=0.023  Score=35.56  Aligned_cols=29  Identities=24%  Similarity=0.411  Sum_probs=24.0

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.+.|..|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eme_A            7 GSGEKPYVCDYCGKAFGLSAELVRHQRIH   35 (46)
T ss_dssp             TCCCCSEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCCCeECCCCChhhCCHHHHHHHHHhc
Confidence            33445689999999999999999999643

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.15  E-value=0.02  Score=35.79  Aligned_cols=29  Identities=24%  Similarity=0.422  Sum_probs=24.1

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|+|.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yts_A            7 GTGEKPYICNECGKSFIQKSHLNRHRRIH   35 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHGGGT
T ss_pred             CCCCcCEECCCCChhhCChHHHHHHHHhc
Confidence            44455689999999999999999998643

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.14  E-value=0.021  Score=35.87  Aligned_cols=30  Identities=20%  Similarity=0.375  Sum_probs=24.5

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|.+|||.|.+...|..|+...+
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emi_A            7 GTGERHYECSECGKAFIQKSTLSMHQRIHR   36 (46)
T ss_dssp             CSSCCCEECSSSCCEESSHHHHHHHHGGGC
T ss_pred             cCCCCCCCCCCCCcccCCHHHHHHHHhHhC
Confidence            344456899999999999999999987543

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.13  E-value=0.025  Score=35.56  Aligned_cols=29  Identities=21%  Similarity=0.457  Sum_probs=24.1

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.+.|..|+|.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em6_A            7 GMGEKCYKCDVCGKEFSQSSHLQTHQRVH   35 (46)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHTTT
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHc
Confidence            44455689999999999999999998643

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.13  E-value=0.022  Score=35.33  Aligned_cols=29  Identities=24%  Similarity=0.401  Sum_probs=24.2

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.+.|..|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (44)
T 2eoj_A            7 GTGENPYECCECGKVFSRKDQLVSHQKTH   35 (44)
T ss_dssp             SSSCCSCEETTTTEECSSHHHHHHHHTTS
T ss_pred             cCCCcCeeCCCCCCccCCHHHHHHHHHHc
Confidence            44445689999999999999999998754

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.12  E-value=0.016  Score=36.37  Aligned_cols=30  Identities=23%  Similarity=0.494  Sum_probs=24.6

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|..|+|.|.+...|..|+...+
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2em3_A            7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHT   36 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHHHHC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHhC
Confidence            344456899999999999999999996543

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.10  E-value=0.024  Score=35.48  Aligned_cols=30  Identities=20%  Similarity=0.417  Sum_probs=24.5

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.++|..|||.|.+...|..|+...+
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2eoe_A            7 GTGEKPYKCNECGKVFTQNSHLANHQRIHT   36 (46)
T ss_dssp             CCCCCSSEETTTTEECSSHHHHHHHHGGGS
T ss_pred             CCCCCCeECCCcChhhCCHHHHHHHHHHcC
Confidence            334456899999999999999999996543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.10  E-value=0.017  Score=34.02  Aligned_cols=27  Identities=15%  Similarity=0.362  Sum_probs=22.8

Q ss_pred             cCcccccccccccCCchhhHhhhhhcc
Q 024416           98 DINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        98 ~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      ....+.|.+|+|.|.....|..|+...
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elt_A            6 SGKPYKCPQCSYASAIKANLNVHLRKH   32 (36)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHHHc
Confidence            344689999999999999999998643

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.10  E-value=0.029  Score=35.30  Aligned_cols=29  Identities=21%  Similarity=0.408  Sum_probs=24.0

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|+|.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yth_A            7 GSGEKPFQCEECGKRFTQNSHLHSHQRVH   35 (46)
T ss_dssp             CCCSSSBCCSSSCCCBSSHHHHHHHGGGG
T ss_pred             CCCCcCCCCCCCCcccCCHHHHHHHHHhc
Confidence            33445689999999999999999998653

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.09  E-value=0.017  Score=36.19  Aligned_cols=30  Identities=27%  Similarity=0.496  Sum_probs=24.7

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....++|..|+|.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eow_A            7 GTGEKPYKCNECGKAFRARSSLAIHQATHS   36 (46)
T ss_dssp             SCCCCCEECTTSCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCeeccccCChhcCHHHHHHHHHHcC
Confidence            444456899999999999999999997543

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.08  E-value=0.025  Score=35.48  Aligned_cols=30  Identities=23%  Similarity=0.422  Sum_probs=24.5

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|..|||.|.+...|..|+...+
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eoq_A            7 GTGEKPFKCDICGKSFCGRSRLNRHSMVHT   36 (46)
T ss_dssp             SSSSCSCCCSSSCCCCSSHHHHHHHHHHTT
T ss_pred             CCCCCCcCCCcCCchhCCHHHHHHHHHHcC
Confidence            334456899999999999999999987543

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.07  E-value=0.023  Score=35.52  Aligned_cols=30  Identities=23%  Similarity=0.374  Sum_probs=24.4

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|..|||.|.+...|..|+...+
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eov_A            7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHT   36 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCccCCccChhhCCHHHHHHHHHhcC
Confidence            334456899999999999999999986543

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=94.06  E-value=0.034  Score=44.78  Aligned_cols=68  Identities=18%  Similarity=0.297  Sum_probs=52.1

Q ss_pred             cCCCCCCCCCCccccchhhhhhhh-cCc-----cccc--ccccccCCchhhHhhhhhccccccccCCccCchhhhccccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHV-DIN-----EWRC--GYCKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCGALH  145 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~-~~h-----~wrC--~~CgK~F~sE~~LDlHidnrH~~ll~~~~~~CLaD~Cd~L~  145 (268)
                      -+-.|+.+-....|.....++.|. ..|     .+.|  ..|||.|.+...|..|+...+..    ..-.|-.++|+...
T Consensus        71 ~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~----~~~~C~~~~C~k~F  146 (190)
T 1tf6_A           71 KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ----LPYECPHEGCDKRF  146 (190)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSS----CSSBCCSSSCCCBC
T ss_pred             CceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCC----CCccCCCCCCCchh
Confidence            456787655567899999999998 666     4899  88999999999999999865432    23467667777554

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.06  E-value=0.022  Score=35.73  Aligned_cols=29  Identities=21%  Similarity=0.393  Sum_probs=24.1

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.+.|..|||.|.+...|..|+...
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2en1_A            7 GSGEKPFKCEECGKRFTQNSQLHSHQRVH   35 (46)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGG
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHc
Confidence            33445689999999999999999999653

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.06  E-value=0.023  Score=35.91  Aligned_cols=31  Identities=23%  Similarity=0.195  Sum_probs=25.2

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhccc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      .|...-.++|..|+|.|.+...|..|+...+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHT   36 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHS
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhC
Confidence            3444556899999999999999999987543

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.04  E-value=0.021  Score=35.76  Aligned_cols=30  Identities=20%  Similarity=0.396  Sum_probs=24.7

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|..|+|.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytf_A            7 GTGEKPFECSECQKAFNTKSNLIVHQRTHT   36 (46)
T ss_dssp             SCCCCSEECSSSCCEESSHHHHHHHHHTSC
T ss_pred             CCCCCCcCCCCCCcccCCHHHHHHHHHHhC
Confidence            444556899999999999999999987543

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.03  E-value=0.02  Score=36.01  Aligned_cols=30  Identities=20%  Similarity=0.316  Sum_probs=24.6

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|...-.+.|.+|+|.|.+...|..|+...
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2ytp_A            6 SGTGERHYECSECGKAFARKSTLIMHQRIH   35 (46)
T ss_dssp             SSCCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CcCCCCCeECCcCCcccCCHHHHHHHHHHh
Confidence            344455689999999999999999998753

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.02  E-value=0.023  Score=35.64  Aligned_cols=29  Identities=21%  Similarity=0.361  Sum_probs=24.3

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em7_A            7 GTGEKPYKCEECGKGFICRRDLYTHHMVH   35 (46)
T ss_dssp             SSCCCSEECSSSCCEESCHHHHHHHGGGG
T ss_pred             CCCCcCccCCCccchhCCHHHHHHHHHHh
Confidence            44455689999999999999999998654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=94.01  E-value=0.019  Score=42.92  Aligned_cols=48  Identities=21%  Similarity=0.423  Sum_probs=28.3

Q ss_pred             CCCCCCCCCccccchhhhhhhhcCc----cccccc--ccccCCchhhHhhhhhccc
Q 024416           76 SKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGY--CKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        76 ~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~--CgK~F~sE~~LDlHidnrH  125 (268)
                      -.|+.-  ...|.....++.|...|    .+.|..  |+|.|.+...|..|+...+
T Consensus        35 ~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   88 (124)
T 1ubd_C           35 HVCAEC--GKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHT   88 (124)
T ss_dssp             EECTTT--CCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             eECCCC--CchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhC
Confidence            345443  24666666666666443    256764  7777777777777765433

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.01  E-value=0.019  Score=35.46  Aligned_cols=30  Identities=20%  Similarity=0.410  Sum_probs=24.7

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|..|+|.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2eof_A            7 GTGEKPYECNECQKAFNTKSNLMVHQRTHT   36 (44)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHTT
T ss_pred             CCCCCCeECCCCCcccCCHhHHHHHHHHhC
Confidence            444556899999999999999999996543

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.01  E-value=0.017  Score=36.00  Aligned_cols=30  Identities=20%  Similarity=0.500  Sum_probs=24.7

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|..|||.|.+...|..|+...+
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   34 (44)
T 2emx_A            5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHA   34 (44)
T ss_dssp             CSSCCCEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHhC
Confidence            444456899999999999999999987643

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=94.00  E-value=0.017  Score=36.28  Aligned_cols=30  Identities=20%  Similarity=0.443  Sum_probs=24.9

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|.+|||.|.+...|..|+...+
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2en6_A            7 GSGEKPYGCNECGKTFSQKSILSAHQRTHT   36 (46)
T ss_dssp             CCSSCCEEETTTTEEESSHHHHHHHHHHHS
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHHHcC
Confidence            344456899999999999999999997643

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.98  E-value=0.031  Score=35.13  Aligned_cols=30  Identities=20%  Similarity=0.323  Sum_probs=24.6

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|..|||.|.+...|..|+...+
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2elz_A            7 GSVEKPYKCEDCGKGYNRRLNLDMHQRVHM   36 (46)
T ss_dssp             CCCCSSCBCSSSCCBCSSHHHHHHHGGGGG
T ss_pred             CCCCCCeeCcccCchhCCHHHHHHHHHhcC
Confidence            444456899999999999999999987543

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=93.98  E-value=0.025  Score=35.59  Aligned_cols=29  Identities=24%  Similarity=0.393  Sum_probs=24.1

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.+.|.+|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2emk_A            7 GTGEKPYECKECGKAFSQTTHLIQHQRVH   35 (46)
T ss_dssp             CSSSCSCBCSSSCCBCSCHHHHHHHHHHH
T ss_pred             cCCCCceECCCCCchhCCHHHHHHHHHHc
Confidence            33445689999999999999999999653

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.98  E-value=0.024  Score=35.35  Aligned_cols=30  Identities=23%  Similarity=0.386  Sum_probs=24.6

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|.+|+|.|.+...|..|+...+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   34 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTH   34 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHT
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhC
Confidence            344456899999999999999999987543

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.96  E-value=0.023  Score=35.68  Aligned_cols=30  Identities=20%  Similarity=0.302  Sum_probs=24.6

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|...-.+.|.+|||.|.+...|..|+...
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytj_A            6 SGTGEKPYICAECGKAFTIRSNLIKHQKIH   35 (46)
T ss_dssp             TTSSCCSEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CCCCCcCeECCCCChhhCCHHHHHHHHHHc
Confidence            344455689999999999999999998653

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.94  E-value=0.021  Score=35.94  Aligned_cols=28  Identities=21%  Similarity=0.431  Sum_probs=23.6

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      |.....+.|..|||.|.+...|..|+..
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2em5_A            7 GSSTKSHQCHECGRGFTLKSHLNQHQRI   34 (46)
T ss_dssp             CCCSCSEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCCCCCeECCcCCCccCCHHHHHHHHHH
Confidence            3344568999999999999999999865

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=93.94  E-value=0.026  Score=41.58  Aligned_cols=49  Identities=20%  Similarity=0.348  Sum_probs=39.4

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcCc--ccccccccccCCchhhHhhhhhcccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDIN--EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~h--~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      -+-.|+.-  ...|.....++.|...|  .+.|..|+|.|.+...|..|+ . |.
T Consensus        15 ~~~~C~~C--~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~-~-H~   65 (107)
T 1wjp_A           15 EVYQCRLC--NAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHE-S-KC   65 (107)
T ss_dssp             CCCBCTTT--CCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHH-H-HC
T ss_pred             cCeECCCC--CCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHH-H-cC
Confidence            34567653  46899999999998654  479999999999999999999 3 65

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=93.94  E-value=0.019  Score=42.23  Aligned_cols=49  Identities=22%  Similarity=0.503  Sum_probs=39.4

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      +-.| .  ....|.....++.|...|    .+.|..|+|.|.+...|..|+...|.
T Consensus        10 ~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   62 (110)
T 2csh_A           10 LYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG   62 (110)
T ss_dssp             CEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCC
T ss_pred             CEec-c--CCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCC
Confidence            4466 3  457899999999888544    48999999999999999999976544

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.94  E-value=0.018  Score=36.12  Aligned_cols=30  Identities=23%  Similarity=0.361  Sum_probs=24.9

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|..|||.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emy_A            7 GTGENPYECHECGKAFSRKYQLISHQRTHA   36 (46)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHHT
T ss_pred             CCCCcCcCCCCCCcccCcHHHHHHHHHHcC
Confidence            444556899999999999999999987643

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.88  E-value=0.021  Score=35.81  Aligned_cols=30  Identities=27%  Similarity=0.506  Sum_probs=24.6

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|.+|||.|.+...|..|+...+
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytg_A            7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHT   36 (46)
T ss_dssp             CSSCCSEECTTTCCEESSSHHHHTTGGGGS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcC
Confidence            344556899999999999999999986543

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.85  E-value=0.022  Score=35.71  Aligned_cols=29  Identities=31%  Similarity=0.440  Sum_probs=24.0

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.+.|.+|+|.|.+...|..|+...
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIH   35 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTT
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHh
Confidence            33445689999999999999999998653

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.84  E-value=0.018  Score=36.25  Aligned_cols=31  Identities=26%  Similarity=0.417  Sum_probs=25.3

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhccc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      .|...-.+.|.+|+|.|.+...|..|+...+
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHT   36 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHH
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            3444556899999999999999999987643

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.82  E-value=0.023  Score=35.60  Aligned_cols=29  Identities=24%  Similarity=0.562  Sum_probs=24.3

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ene_A            7 GTGEKPYKCNECGKVFRHNSYLSRHQRIH   35 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCeECCCCCchhCChHHHHHHHhhc
Confidence            44455689999999999999999998753

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.82  E-value=0.025  Score=35.51  Aligned_cols=30  Identities=27%  Similarity=0.431  Sum_probs=24.9

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|.....+.|..|+|.|.+...|..|+...
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIH   35 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHh
Confidence            344556689999999999999999998653

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=93.81  E-value=0.027  Score=42.15  Aligned_cols=51  Identities=24%  Similarity=0.343  Sum_probs=39.3

Q ss_pred             CCCCCCCCCCccc-cchhhhhhhhcCc---ccccccccccCCchhhHhhhhhccccc
Q 024416           75 SSKCRLHPDNDMF-RDQEQHKIHVDIN---EWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        75 ~~~C~L~P~~D~F-~~~E~~k~h~~~h---~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      +-.|+.-  ...| .....++.|...|   .+.|..|||.|.+...|..|+...|..
T Consensus        34 ~~~C~~C--~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           34 SVSCPTC--QAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             CEECTTT--CSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CcCCCCC--CCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            3467653  4689 7888888887443   578999999999999999996667763

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=93.81  E-value=0.026  Score=33.45  Aligned_cols=23  Identities=26%  Similarity=0.580  Sum_probs=20.6

Q ss_pred             cccccccccCCchhhHhhhhhcc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      +.|..|||.|.+...|..|+...
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~~~H   25 (33)
T 1rim_A            3 FACPECPKRFMRSDHLSKHITLH   25 (33)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             ccCCCCCchhCCHHHHHHHHHHh
Confidence            67999999999999999998643

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=93.80  E-value=0.025  Score=40.48  Aligned_cols=52  Identities=15%  Similarity=0.391  Sum_probs=42.3

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcCc----ccccc--cccccCCchhhHhhhhhcccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCG--YCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~--~CgK~F~sE~~LDlHidnrH~  126 (268)
                      +-.|.++-....|.....++.|...|    .+.|.  .|+|.|.+...|..|+...+.
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   72 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG   72 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTS
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCC
Confidence            45688877778999999999988544    48996  599999999999999976544

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.79  E-value=0.017  Score=36.00  Aligned_cols=30  Identities=23%  Similarity=0.421  Sum_probs=24.7

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|..|||.|.+...|..|+...+
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~   36 (44)
T 2eox_A            7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHT   36 (44)
T ss_dssp             CCCCCCEEETTTTEEESSSHHHHTTHHHHC
T ss_pred             CCCCCCeECcccCcccCCHHHHHHHHHHhC
Confidence            444456899999999999999999997543

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.78  E-value=0.021  Score=35.81  Aligned_cols=30  Identities=20%  Similarity=0.478  Sum_probs=24.8

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....++|..|||.|.+...|..|+...+
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytk_A            7 GSGEKPYKCNECGKVFTQNSHLTNHWRIHT   36 (46)
T ss_dssp             SSSSCSEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             CCCCCCEeCCcCCCccCCHHHHHHHHHHHC
Confidence            444556899999999999999999997543

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.78  E-value=0.031  Score=35.15  Aligned_cols=30  Identities=23%  Similarity=0.411  Sum_probs=24.4

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|.+|+|.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eoh_A            7 GSGKKPYECKECRKTFIQIGHLNQHKRVHT   36 (46)
T ss_dssp             CCCSCSCCCSSSCCCCSSHHHHHHHHHHCS
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhC
Confidence            334456899999999999999999987543

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=93.77  E-value=0.017  Score=32.02  Aligned_cols=23  Identities=26%  Similarity=0.543  Sum_probs=20.5

Q ss_pred             ccccccccccCCchhhHhhhhhc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      .+.|.+|||.|.+...|..|+..
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRI   24 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHH
T ss_pred             CccCCCCCCccCChhHHHHHHHH
Confidence            36899999999999999999864

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.77  E-value=0.02  Score=36.06  Aligned_cols=30  Identities=23%  Similarity=0.489  Sum_probs=24.7

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|.+|||.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eoz_A            7 GTGEKPYSCNVCGKAFVLSAHLNQHLRVHT   36 (46)
T ss_dssp             CSSCCSEEETTTTEEESSHHHHHHHHHHHS
T ss_pred             CCCCCCeECcccChhhCCHHHHHHHHHHhC
Confidence            444456899999999999999999987644

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.77  E-value=0.025  Score=33.56  Aligned_cols=26  Identities=27%  Similarity=0.598  Sum_probs=22.5

Q ss_pred             CcccccccccccCCchhhHhhhhhcc
Q 024416           99 INEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        99 ~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      ...+.|.+|+|.|.....|..|+...
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRIH   32 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHHh
Confidence            34679999999999999999998653

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=93.71  E-value=0.026  Score=38.60  Aligned_cols=48  Identities=19%  Similarity=0.416  Sum_probs=35.5

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcCc----cccccc--ccccCCchhhHhhhhh
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGY--CKKSFRAEKFLDQHFD  122 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~--CgK~F~sE~~LDlHid  122 (268)
                      +-.|+.+-....|.....++.|...|    .++|.+  |+|.|.+...|..|+.
T Consensus        17 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             ceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            34576654556888888888877443    478965  9999999999998874

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.70  E-value=0.022  Score=35.73  Aligned_cols=30  Identities=20%  Similarity=0.409  Sum_probs=24.7

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|..|||.|.+...|..|+...+
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ysp_A            7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHT   36 (46)
T ss_dssp             CSSCCSEEETTTTEEESCHHHHHHHHTTSC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHhhC
Confidence            444456899999999999999999987643

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.69  E-value=0.029  Score=34.94  Aligned_cols=29  Identities=24%  Similarity=0.337  Sum_probs=24.1

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|+|.|.+...|..|+...
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (44)
T 2eou_A            7 GAAKTTSECQECGKIFRHSSLLIEHQALH   35 (44)
T ss_dssp             CSSSCCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHH
Confidence            33445689999999999999999998653

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.69  E-value=0.028  Score=34.87  Aligned_cols=29  Identities=24%  Similarity=0.476  Sum_probs=23.8

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (44)
T 2emb_A            7 GHTRKRYECSKCQATFNLRKHLIQHQKTH   35 (44)
T ss_dssp             CCCCSSEECTTTCCEESCHHHHHHHGGGG
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHc
Confidence            33445689999999999999999998643

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=93.67  E-value=0.029  Score=35.06  Aligned_cols=30  Identities=27%  Similarity=0.366  Sum_probs=24.7

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|...-.+.|..|||.|.+...|..|+...
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em9_A            6 SGTGEKPYNCKECGKSFRWASCLLKHQRVH   35 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHGGGG
T ss_pred             CCCCCcCeECCccccccCChHHHHHHHHHh
Confidence            344455689999999999999999998653

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=93.67  E-value=0.018  Score=45.77  Aligned_cols=51  Identities=25%  Similarity=0.468  Sum_probs=40.9

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhccccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      |-.|+.-  ...|.....++.|...|    .+.|..|||.|.+...|..|+...|..
T Consensus        50 ~~~C~~C--~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~  104 (133)
T 2lt7_A           50 KYPCRYC--EKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQ  104 (133)
T ss_dssp             CEECSSS--SCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred             CeeCCcc--CeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence            4467653  35899988888888655    488999999999999999999988864

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.67  E-value=0.028  Score=35.26  Aligned_cols=30  Identities=23%  Similarity=0.398  Sum_probs=24.6

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|...-.++|..|||.|.+...|..|+...
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2eq0_A            6 SGTGEKPYKCHECGKVFRRNSHLARHQLIH   35 (46)
T ss_dssp             CTTCCCCEECTTTCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHc
Confidence            344455689999999999999999998653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.66  E-value=0.026  Score=33.44  Aligned_cols=27  Identities=19%  Similarity=0.532  Sum_probs=22.9

Q ss_pred             cCcccccccccccCCchhhHhhhhhcc
Q 024416           98 DINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        98 ~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      ..-.+.|.+|+|.|.+...|..|+...
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elq_A            6 SGKPFKCSLCEYATRSKSNLKAHMNRH   32 (36)
T ss_dssp             CCCSEECSSSSCEESCHHHHHHHHHHS
T ss_pred             CCCCccCCCCCchhCCHHHHHHHHHHh
Confidence            345689999999999999999998643

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.62  E-value=0.019  Score=36.03  Aligned_cols=30  Identities=20%  Similarity=0.302  Sum_probs=24.7

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|.....++|..|||.|.+...|..|+...
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2emh_A            6 SGTGERPYICTVCGKAFTDRSNLIKHQKIH   35 (46)
T ss_dssp             SCSCCCSEECTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHhc
Confidence            344455689999999999999999998653

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.62  E-value=0.024  Score=35.41  Aligned_cols=29  Identities=21%  Similarity=0.274  Sum_probs=24.2

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2epw_A            7 GTGEKPCKCTECGKAFCWKSQLIMHQRTH   35 (46)
T ss_dssp             CCCCCSEECSSSCCEESSSHHHHHHHHHC
T ss_pred             CCCCCCeeCCCCCCccCCHHHHHHHHHHh
Confidence            33445689999999999999999999753

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.61  E-value=0.027  Score=35.28  Aligned_cols=29  Identities=24%  Similarity=0.437  Sum_probs=24.2

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ep2_A            7 GTGEKPYECSICGKSFTKKSQLHVHQQIH   35 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHHTT
T ss_pred             CCCCcCcCCCCCCcccCCHHHHHHHHHHh
Confidence            44455689999999999999999999753

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=93.60  E-value=0.04  Score=33.42  Aligned_cols=26  Identities=27%  Similarity=0.806  Sum_probs=22.4

Q ss_pred             cccccccccccCCchhhHhhhhhccc
Q 024416          100 NEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus       100 h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      -.+.|..|||.|.+...|..|+...+
T Consensus         5 k~~~C~~C~k~f~~~~~L~~H~~~H~   30 (39)
T 1njq_A            5 RSYTCSFCKREFRSAQALGGHMNVHR   30 (39)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CceECCCCCcccCCHHHHHHHHHHcC
Confidence            35789999999999999999987544

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=93.56  E-value=0.023  Score=35.74  Aligned_cols=30  Identities=23%  Similarity=0.356  Sum_probs=24.6

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|...-.+.|..|+|.|.+...|..|+...
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2emj_A            6 SGTGEKPFECAECGKSFSISSQLATHQRIH   35 (46)
T ss_dssp             CCCCCCSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCEECCCCCcccCCHHHHHHHHHHh
Confidence            344455689999999999999999998653

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=93.55  E-value=0.031  Score=35.14  Aligned_cols=31  Identities=26%  Similarity=0.446  Sum_probs=25.1

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhccc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      .|.....+.|..|+|.|.+...|..|+...+
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2el6_A            6 SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHT   36 (46)
T ss_dssp             SSCCCCSEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcC
Confidence            3444556899999999999999999986543

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.54  E-value=0.031  Score=34.94  Aligned_cols=30  Identities=20%  Similarity=0.321  Sum_probs=24.4

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|.+|+|.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (44)
T 2epv_A            7 GSGEKPYECNECGKAFIWKSLLIVHERTHA   36 (44)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHGGGS
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHhHhc
Confidence            334456899999999999999999987543

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.51  E-value=0.028  Score=35.44  Aligned_cols=30  Identities=20%  Similarity=0.319  Sum_probs=24.5

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|..|+|.|.+...|..|+...+
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytm_A            7 GTGEKPYKCMECGKAFGDNSSCTQHQRLHT   36 (46)
T ss_dssp             CSSCCSSSBTTTTBCCSSHHHHHHHHHHHH
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHcC
Confidence            334456899999999999999999997643

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.50  E-value=0.02  Score=35.15  Aligned_cols=29  Identities=17%  Similarity=0.293  Sum_probs=23.8

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.+.|.+|||.|.+...|..|+...
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   34 (42)
T 2en2_A            6 SGGEKPYKCETCGARFVQVAHLRAHVLIH   34 (42)
T ss_dssp             CCSSCSEECTTTCCEESSHHHHHHHTHHH
T ss_pred             cCCCCCEeCCCcChhhCCHHHHHHHHHHc
Confidence            33445689999999999999999998643

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.50  E-value=0.025  Score=35.33  Aligned_cols=29  Identities=28%  Similarity=0.353  Sum_probs=24.2

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2emm_A            7 GTGERPHKCNECGKSFIQSAHLIQHQRIH   35 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHHHH
T ss_pred             cCCCCCeeCCCCChhhCCHHHHHHHHHHh
Confidence            44445689999999999999999998654

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.48  E-value=0.027  Score=35.00  Aligned_cols=30  Identities=23%  Similarity=0.534  Sum_probs=24.7

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|..|+|.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2yu5_A            7 GAGENPFKCSKCDRVFTQRNYLVQHERTHA   36 (44)
T ss_dssp             CSCCCSEECSSSSCEESSSHHHHHHHHHCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHhHhcC
Confidence            334456899999999999999999987643

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.46  E-value=0.021  Score=35.80  Aligned_cols=30  Identities=20%  Similarity=0.339  Sum_probs=24.7

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|.....+.|..|||.|.+...|..|+...
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2emp_A            6 SGTGVKPYMCNECGKAFSVYSSLTTHQVIH   35 (46)
T ss_dssp             CSSCCCSEECSSSCCEESCHHHHHHHHHHH
T ss_pred             ccCCCcCeECCCCCchhCCHHHHHHHHHHc
Confidence            344455689999999999999999998754

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.42  E-value=0.029  Score=35.04  Aligned_cols=29  Identities=21%  Similarity=0.225  Sum_probs=23.9

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|+|.|.+...|..|+...
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2en8_A            7 GSGEKSHTCDECGKNFCYISALRIHQRVH   35 (46)
T ss_dssp             CCCCSSEECTTTCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCeECCCcCcccCCHHHHHHHHHHh
Confidence            33445689999999999999999998643

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.33  E-value=0.023  Score=35.79  Aligned_cols=29  Identities=21%  Similarity=0.446  Sum_probs=24.1

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.+.|..|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2eoo_A            7 GSGERPYGCNECGKNFGRHSHLIEHLKRH   35 (46)
T ss_dssp             CSCCCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCCCCCEEccccCcccCCHHHHHHHHHHH
Confidence            33445589999999999999999998764

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.33  E-value=0.027  Score=35.44  Aligned_cols=30  Identities=20%  Similarity=0.414  Sum_probs=24.6

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|..|+|.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yto_A            7 GTGEKPYKCSDCGKAFTRKSGLHIHQQSHT   36 (46)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCEECcccCCccCCHhHHHHHHHHcC
Confidence            334456899999999999999999987643

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.30  E-value=0.026  Score=35.39  Aligned_cols=30  Identities=20%  Similarity=0.460  Sum_probs=24.5

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |.....+.|..|+|.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytd_A            7 GSGEKPYKCSECGKAFHRHTHLNEHRRIHT   36 (46)
T ss_dssp             SCCCCSEECSSSCCEESSHHHHHHHHHHHT
T ss_pred             cCCCcCeECCCCCCeeCChHHHHHHHHHcC
Confidence            334456899999999999999999986543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=93.30  E-value=0.03  Score=36.28  Aligned_cols=29  Identities=21%  Similarity=0.503  Sum_probs=24.5

Q ss_pred             CcccccccccccCCchhhHhhhhhccccc
Q 024416           99 INEWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        99 ~h~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      .-.+.|..|||.|.....|..|+...|..
T Consensus         5 ~kp~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            5 DKPYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             TSCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             CcCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            34578999999999999999999855654

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.29  E-value=0.024  Score=35.44  Aligned_cols=31  Identities=19%  Similarity=0.354  Sum_probs=25.0

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhccc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      .|.....+.|..|+|.|.+...|..|+...+
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eor_A            6 SGTGEKPYNCEECGKAFIHDSQLQEHQRIHT   36 (46)
T ss_dssp             SSSCCCSEECTTTCCEESSHHHHHHHHHHHH
T ss_pred             CcCCCcCccCCCCCCCcCCHHHHHHHHHhcC
Confidence            3444556899999999999999999987543

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.29  E-value=0.028  Score=35.22  Aligned_cols=29  Identities=17%  Similarity=0.121  Sum_probs=24.2

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....+.|..|||.|.+...|..|+...
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yso_A            7 GSREKSHQCRECGEIFFQYVSLIEHQVLH   35 (46)
T ss_dssp             SSCCCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             cCCCCCEEccccChhhCCHHHHHHHHHHh
Confidence            44445689999999999999999998654

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.27  E-value=0.036  Score=34.84  Aligned_cols=30  Identities=20%  Similarity=0.422  Sum_probs=24.5

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|.+|+|.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2emz_A            7 GSGERPFKCNECGKGFGRRSHLAGHLRLHS   36 (46)
T ss_dssp             SSCCCSCCCSSSCCCCSSHHHHHHHHHHHH
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhC
Confidence            344456899999999999999999987543

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=93.22  E-value=0.029  Score=35.26  Aligned_cols=30  Identities=23%  Similarity=0.482  Sum_probs=24.7

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|.+|+|.|.+...|..|+...+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em2_A            7 GSGEKPFKCKECGKAFRQNIHLASHLRIHT   36 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCEECCcCCchhCCHHHHHHHHHHhC
Confidence            344456899999999999999999987543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=93.20  E-value=0.029  Score=36.04  Aligned_cols=22  Identities=23%  Similarity=0.465  Sum_probs=20.3

Q ss_pred             cccccccccccCCchhhHhhhh
Q 024416          100 NEWRCGYCKKSFRAEKFLDQHF  121 (268)
Q Consensus       100 h~wrC~~CgK~F~sE~~LDlHi  121 (268)
                      --+.|.+|||+|.....|..|+
T Consensus         7 kp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCEETTTTEECSCHHHHHHHH
T ss_pred             cCeECCCCCCccCCHhHccCcC
Confidence            4578999999999999999998

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=93.12  E-value=0.037  Score=38.50  Aligned_cols=34  Identities=32%  Similarity=0.718  Sum_probs=28.1

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcccccc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNNL  128 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH~~l  128 (268)
                      +|.....+.|..|+|.|.+...|..|+...|..-
T Consensus         9 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~   42 (86)
T 1x6h_A            9 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   42 (86)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             eecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc
Confidence            3444456899999999999999999999888653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.12  E-value=0.029  Score=33.41  Aligned_cols=27  Identities=22%  Similarity=0.382  Sum_probs=22.7

Q ss_pred             hcCcccccccccccCCch-hhHhhhhhc
Q 024416           97 VDINEWRCGYCKKSFRAE-KFLDQHFDN  123 (268)
Q Consensus        97 ~~~h~wrC~~CgK~F~sE-~~LDlHidn  123 (268)
                      .....+.|.+|+|.|.+. ..|..|+..
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~~L~~H~~~   32 (37)
T 2elp_A            5 SSGRAMKCPYCDFYFMKNGSDLQRHIWA   32 (37)
T ss_dssp             CCCCCEECSSSSCEECSSCHHHHHHHHH
T ss_pred             CCCCCeECCCCChhhccCHHHHHHHHHh
Confidence            334568999999999999 999999864

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.11  E-value=0.031  Score=35.12  Aligned_cols=30  Identities=20%  Similarity=0.323  Sum_probs=24.6

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|.....+.|..|+|.|.+...|..|+...
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em4_A            6 SGTGQRPYECIECGKAFKTKSSLICHRRSH   35 (46)
T ss_dssp             CCCCSSSEECSSSCCEESSHHHHHHHHHHH
T ss_pred             ccCCCcCcCCCCCCCccCCHHHHHHHHHhc
Confidence            344455689999999999999999998754

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.05  E-value=0.038  Score=32.72  Aligned_cols=25  Identities=24%  Similarity=0.404  Sum_probs=21.9

Q ss_pred             CcccccccccccCCchhhHhhhhhc
Q 024416           99 INEWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus        99 ~h~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      .-.+.|..|+|.|.....|..|+..
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elv_A            7 GLLYDCHICERKFKNELDRDRHMLV   31 (36)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHH
Confidence            3457899999999999999999864

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.95  E-value=0.037  Score=34.66  Aligned_cols=29  Identities=17%  Similarity=0.327  Sum_probs=23.9

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.+.|..|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2enc_A            7 GSGEKPFKCEECGKGFYTNSQCYSHQRSH   35 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCCCCCcCCCCCCCcCCChHHHHHHHHHh
Confidence            33445689999999999999999998653

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.92  E-value=0.027  Score=35.33  Aligned_cols=29  Identities=21%  Similarity=0.444  Sum_probs=24.2

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.+.|..|||.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yu8_A            7 GTGEKPYKCNECGKVFTQNSHLARHRRVH   35 (46)
T ss_dssp             CCCCSSEECSSSCCEESSSHHHHHHTHHH
T ss_pred             CCCCCCeECCcCCchhCCHHHHHHHHHhc
Confidence            44455689999999999999999998653

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.86  E-value=0.029  Score=35.27  Aligned_cols=30  Identities=20%  Similarity=0.317  Sum_probs=24.8

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhcc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      .|.....+.|..|||.|.+...|..|+...
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em8_A            6 SGSGEKPYKCVECGKGYKRRLDLDFHQRVH   35 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCeECcccCchhCCHHHHHHHHHHH
Confidence            344455689999999999999999999753

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=92.86  E-value=0.04  Score=34.47  Aligned_cols=31  Identities=13%  Similarity=0.373  Sum_probs=25.2

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      |.....+.|..|+|.|.....|..|+...+.
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   35 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG   35 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccC
Confidence            4444568999999999999999999976443

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=92.84  E-value=0.033  Score=34.92  Aligned_cols=29  Identities=17%  Similarity=0.312  Sum_probs=23.9

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      |...-.+.|.+|+|.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2en3_A            7 GTGEKPFQCKECGMNFSWSCSLFKHLRSH   35 (46)
T ss_dssp             SCCCCSEECSSSCCEESSSHHHHHHHHHH
T ss_pred             cCCCCCeeCcccChhhCCHHHHHHHHHHh
Confidence            33445689999999999999999998653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=92.76  E-value=0.059  Score=30.76  Aligned_cols=23  Identities=30%  Similarity=0.673  Sum_probs=20.1

Q ss_pred             cccc--cccccCCchhhHhhhhhcc
Q 024416          102 WRCG--YCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus       102 wrC~--~CgK~F~sE~~LDlHidnr  124 (268)
                      +.|.  .|||.|.+...|..|+...
T Consensus         3 ~~C~~~~C~k~f~~~~~L~~H~~~H   27 (31)
T 1sp2_A            3 FMCTWSYCGKRFTRSDELQRHKRTH   27 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTTT
T ss_pred             cCCcCCCCCcccCCHhHHHHHHHHh
Confidence            5787  9999999999999998653

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.69  E-value=0.041  Score=34.55  Aligned_cols=28  Identities=29%  Similarity=0.568  Sum_probs=23.5

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      |...-.+.|..|||.|.+...|..|+..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eoy_A            7 GQKEKCFKCNKCEKTFSCSKYLTQHERI   34 (46)
T ss_dssp             CCCSCCEECSSSCCEESSSHHHHHHHTT
T ss_pred             cCCCCCEECcCCCCcCCCHHHHHHHHHH
Confidence            4444568999999999999999999854

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=92.66  E-value=0.041  Score=35.69  Aligned_cols=26  Identities=31%  Similarity=0.761  Sum_probs=22.3

Q ss_pred             ccccccccccCCchhhHhhhhhcccc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      .++|..|+|.|.+...|..|+...+.
T Consensus         4 ~~~C~~C~~~f~~~~~l~~H~~~h~~   29 (57)
T 3uk3_C            4 SRECSYCGKFFRSNYYLNIHLRTHTG   29 (57)
T ss_dssp             -CBCTTTCCBCSCHHHHHHHHHHHHC
T ss_pred             CccCCCCcchhCChHHHHHHHHHcCC
Confidence            57899999999999999999986443

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=92.47  E-value=0.04  Score=38.23  Aligned_cols=32  Identities=19%  Similarity=0.471  Sum_probs=26.7

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      |...-.+.|..|+|.|.+...|..|+...|..
T Consensus        10 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~   41 (77)
T 2ct1_A           10 HSGEKPYECYICHARFTQSGTMKMHILQKHTE   41 (77)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             cCCCCCeECCCcCchhCCHHHHHHHHHHhcCC
Confidence            33445689999999999999999999877754

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=92.46  E-value=0.031  Score=37.48  Aligned_cols=31  Identities=16%  Similarity=0.459  Sum_probs=26.5

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhcccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      |.....+.|..|||.|.+...|..|+...|.
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~   35 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHK   35 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcC
Confidence            3445678999999999999999999988773

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=92.44  E-value=0.038  Score=44.50  Aligned_cols=51  Identities=22%  Similarity=0.389  Sum_probs=38.2

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhcccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      -+-.|+.-  ...|.....++.|...|    .+.|..|+|.|.+...|..|+...+.
T Consensus       104 ~~~~C~~C--~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  158 (190)
T 2i13_A          104 KPYACPEC--GKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG  158 (190)
T ss_dssp             CCEECTTT--CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CCCcCCCC--CCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            34567654  35788888888887443    47899999999999999999876554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=92.42  E-value=0.016  Score=34.07  Aligned_cols=22  Identities=27%  Similarity=0.632  Sum_probs=20.1

Q ss_pred             cccccccccCCchhhHhhhhhc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      +.|..|||.|.+...|..|+..
T Consensus         3 ~~C~~C~k~f~~~~~L~~H~~~   24 (32)
T 2kfq_A            3 FACPACPKRFMRSDALSKHIKT   24 (32)
T ss_dssp             SSSSSSCTTHHHHHTTSSSTTS
T ss_pred             CCCCCCCcccCCHHHHHHHHHH
Confidence            6899999999999999999854

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=92.37  E-value=0.061  Score=35.29  Aligned_cols=25  Identities=20%  Similarity=0.712  Sum_probs=22.1

Q ss_pred             ccccccccccCCchhhHhhhhhccc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      .+.|..|+|.|.+...|..|+...+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~   26 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHT   26 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTT
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhC
Confidence            3789999999999999999997643

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=92.33  E-value=0.057  Score=34.37  Aligned_cols=28  Identities=25%  Similarity=0.402  Sum_probs=23.6

Q ss_pred             cCcccccccccccCCchhhHhhhhhccc
Q 024416           98 DINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        98 ~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      ....+.|.+|+|.|.+...|..|+...+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHS   36 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcC
Confidence            3456899999999999999999987543

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=92.32  E-value=0.063  Score=34.75  Aligned_cols=25  Identities=16%  Similarity=0.498  Sum_probs=22.0

Q ss_pred             cccccccccCCchhhHhhhhhcccc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      +.|..|||.|.+...|..|+...+.
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~   26 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTD   26 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCC
Confidence            6899999999999999999976443

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=92.18  E-value=0.01  Score=42.38  Aligned_cols=52  Identities=13%  Similarity=0.175  Sum_probs=42.7

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhcCc---ccccccccccCCchhhHhhhhhccccc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVDIN---EWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~~h---~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      -|-.|+.-  ...|.....++.|...|   .+.|..|++.|.+...|..|+...|+.
T Consensus        30 ~~~~C~~C--~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~~h~~   84 (88)
T 1llm_C           30 KPFACDIC--GRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARLKKL   84 (88)
T ss_dssp             CCEECTTT--CCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccCCCC--CCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            34567653  35899999999998443   378999999999999999999999874

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=92.17  E-value=0.063  Score=36.85  Aligned_cols=31  Identities=29%  Similarity=0.458  Sum_probs=26.1

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhccc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      +|.....++|..|+|.|.+...|..|+...+
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~   38 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHT   38 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcC
Confidence            4555667899999999999999999997644

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=92.04  E-value=0.061  Score=29.68  Aligned_cols=22  Identities=27%  Similarity=0.622  Sum_probs=19.9

Q ss_pred             cccc--cccccCCchhhHhhhhhc
Q 024416          102 WRCG--YCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       102 wrC~--~CgK~F~sE~~LDlHidn  123 (268)
                      +.|.  .|||.|.+...|..|+..
T Consensus         3 ~~C~~~~C~k~f~~~~~l~~H~~~   26 (29)
T 2ab3_A            3 YVCHFENCGRSFNDRRKLNRHKKI   26 (29)
T ss_dssp             EEECSTTTCEEESSHHHHHHHHGG
T ss_pred             CCCcCCcCcCccCCHHHHHHHHHH
Confidence            5799  999999999999999864

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=91.95  E-value=0.089  Score=30.08  Aligned_cols=24  Identities=25%  Similarity=0.488  Sum_probs=20.8

Q ss_pred             ccccc--cccccCCchhhHhhhhhcc
Q 024416          101 EWRCG--YCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus       101 ~wrC~--~CgK~F~sE~~LDlHidnr  124 (268)
                      .+.|.  .|||.|.+...|..|+...
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H   28 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHc
Confidence            36798  8999999999999998653

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=91.30  E-value=0.075  Score=40.98  Aligned_cols=50  Identities=20%  Similarity=0.271  Sum_probs=38.7

Q ss_pred             CCCCCCCCCCccccchhhhhhhhc-Cc-------ccccccccccCCchhhHhhhhhcccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVD-IN-------EWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~-~h-------~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      |-.|+.-  ...|.....++.|.. .|       .+.|..|||.|.+...|..|+...|.
T Consensus        18 py~C~~C--gk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Ht   75 (102)
T 2ghf_A           18 GYECKYC--TFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHP   75 (102)
T ss_dssp             SEECSSC--SCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTST
T ss_pred             CcCCCCC--CCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcC
Confidence            4467653  357998888888874 35       47899999999999999999655564

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=91.08  E-value=0.058  Score=42.82  Aligned_cols=47  Identities=21%  Similarity=0.487  Sum_probs=37.8

Q ss_pred             CCCCCCCCCccccchhhhhhhhcCc----ccccccccccCCchhhHhhhhhccc
Q 024416           76 SKCRLHPDNDMFRDQEQHKIHVDIN----EWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        76 ~~C~L~P~~D~F~~~E~~k~h~~~h----~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      -.|+.-  .-.|.....++.|...|    .+.|.+|||.|.+...|..|+.. |
T Consensus        23 y~C~~C--~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H   73 (133)
T 2lt7_A           23 YICIVC--KRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIH-H   73 (133)
T ss_dssp             EEETTT--CCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHH-H
T ss_pred             eECCCC--CCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccc-c
Confidence            467654  36899999999988655    47899999999999999999854 5

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=91.05  E-value=0.084  Score=42.43  Aligned_cols=40  Identities=25%  Similarity=0.459  Sum_probs=20.5

Q ss_pred             ccccchhhhhhhhcC----cccccccccccCCchhhHhhhhhcc
Q 024416           85 DMFRDQEQHKIHVDI----NEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        85 D~F~~~E~~k~h~~~----h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      ..|.....++.|...    ..+.|..|+|.|.+...|..|+...
T Consensus        57 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  100 (190)
T 2i13_A           57 KSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTH  100 (190)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             chhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhc
Confidence            345555555555422    2345555555555555555555443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.71  E-value=0.099  Score=38.62  Aligned_cols=23  Identities=22%  Similarity=0.575  Sum_probs=15.2

Q ss_pred             ccccccccccCCchhhHhhhhhc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      .+.|..|+|.|.+...|..|+..
T Consensus        19 ~~~C~~C~k~f~~~~~L~~H~~~   41 (115)
T 2dmi_A           19 KFRCKDCSAAYDTLVELTVHMNE   41 (115)
T ss_dssp             SEEBSSSSCEESSHHHHHHHHHH
T ss_pred             CEECCccCchhcCHHHHHHHHHH
Confidence            36666666666666666666654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=90.37  E-value=0.16  Score=33.23  Aligned_cols=29  Identities=24%  Similarity=0.518  Sum_probs=23.4

Q ss_pred             CcccccccccccCCchhhHhhhhhccccc
Q 024416           99 INEWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        99 ~h~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      .-.+.|.+|+|.|.+...|..|+...|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   38 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTS   38 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            34578999999999999999998766643

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=90.20  E-value=0.12  Score=35.54  Aligned_cols=28  Identities=25%  Similarity=0.472  Sum_probs=23.9

Q ss_pred             cCcccccccccccCCchhhHhhhhhccc
Q 024416           98 DINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        98 ~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      ....++|..|+|.|.+...|..|+...+
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~   41 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHT   41 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcC
Confidence            3456899999999999999999997544

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=90.19  E-value=0.12  Score=35.04  Aligned_cols=26  Identities=19%  Similarity=0.201  Sum_probs=23.1

Q ss_pred             CcccccccccccCCchhhHhhhhhcc
Q 024416           99 INEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        99 ~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      ...++|..|+|.|.+...|..|+...
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~~H~~~H   32 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALRIHERIH   32 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHc
Confidence            45689999999999999999999763

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=89.85  E-value=0.15  Score=36.69  Aligned_cols=27  Identities=30%  Similarity=0.455  Sum_probs=23.5

Q ss_pred             cccccccccccCCchhhHhhhhhcccc
Q 024416          100 NEWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus       100 h~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      -.+.|.+|+|.|.....|..|+...+.
T Consensus        12 kpy~C~~CgK~F~~~s~L~~H~r~Htg   38 (66)
T 2epp_A           12 GILPCGLCGKVFTDANRLRQHEAQHGV   38 (66)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             cCcCCCCCCCccCCHHHHHhhhhhhCC
Confidence            347899999999999999999987554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=89.74  E-value=0.086  Score=36.49  Aligned_cols=29  Identities=17%  Similarity=0.319  Sum_probs=24.6

Q ss_pred             cCcccccccccccCCchhhHhhhhhcccc
Q 024416           98 DINEWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        98 ~~h~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      ..-.++|..|+|.|.+...|..|+...+.
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAE   32 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhc
Confidence            34568999999999999999999976554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=89.62  E-value=0.13  Score=37.72  Aligned_cols=32  Identities=19%  Similarity=0.196  Sum_probs=26.4

Q ss_pred             hhhcCcccccccccccCC-chhhHhhhhhcccc
Q 024416           95 IHVDINEWRCGYCKKSFR-AEKFLDQHFDNRHN  126 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~-sE~~LDlHidnrH~  126 (268)
                      .|.....+.|..|+|.|. +...|..|+...|.
T Consensus        18 ~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~   50 (98)
T 2gqj_A           18 AIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQK   50 (98)
T ss_dssp             TTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHH
T ss_pred             HhccCCCcCCCCCCCChhhhHHHHHHHHHHHcC
Confidence            344556799999999999 99999999976554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=89.52  E-value=0.16  Score=35.04  Aligned_cols=27  Identities=26%  Similarity=0.506  Sum_probs=23.5

Q ss_pred             CcccccccccccCCchhhHhhhhhccc
Q 024416           99 INEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        99 ~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      ...++|..|+|.|.+...|..|+...+
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~   42 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHRRTHT   42 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHcC
Confidence            456899999999999999999997543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=88.86  E-value=0.12  Score=36.11  Aligned_cols=24  Identities=29%  Similarity=0.668  Sum_probs=21.2

Q ss_pred             cccccccccCCchhhHhhhhhcccc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      +.|.+|||.|.+...|..|+.. |.
T Consensus         5 y~C~~C~k~F~~~~~L~~H~~~-Ht   28 (60)
T 4gzn_C            5 FFCNFCGKTYRDASGLSRHRRA-HL   28 (60)
T ss_dssp             EECTTTCCEESSHHHHHHHHHH-HH
T ss_pred             ccCCCCCCEeCCHHHHHHHHHH-hC
Confidence            6899999999999999999854 53

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=88.47  E-value=0.16  Score=37.90  Aligned_cols=29  Identities=21%  Similarity=0.384  Sum_probs=24.4

Q ss_pred             cCcccccccccccCCchhhHhhhhhcccc
Q 024416           98 DINEWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        98 ~~h~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      ..-.+.|.+|||.|.+...|..|+...|.
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~   53 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHA   53 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccC
Confidence            33457899999999999999999987654

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.18  E-value=0.21  Score=33.81  Aligned_cols=42  Identities=19%  Similarity=0.159  Sum_probs=33.0

Q ss_pred             ccccchhhhhhhhc---Ccccccc-cccccCCchhhHhhhhhcccccc
Q 024416           85 DMFRDQEQHKIHVD---INEWRCG-YCKKSFRAEKFLDQHFDNRHNNL  128 (268)
Q Consensus        85 D~F~~~E~~k~h~~---~h~wrC~-~CgK~F~sE~~LDlHidnrH~~l  128 (268)
                      ..|. ...++.|..   ...+.|. .|||.|.....|..|+.. |-+.
T Consensus        18 k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~-hc~~   63 (66)
T 2eod_A           18 KEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKD-SCNT   63 (66)
T ss_dssp             CEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHT-TSSS
T ss_pred             CccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHh-hccc
Confidence            4788 888888873   2357899 999999999999999864 5443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=87.44  E-value=0.2  Score=29.99  Aligned_cols=25  Identities=20%  Similarity=0.406  Sum_probs=21.1

Q ss_pred             Cccccccc--ccccCCchhhHhhhhhc
Q 024416           99 INEWRCGY--CKKSFRAEKFLDQHFDN  123 (268)
Q Consensus        99 ~h~wrC~~--CgK~F~sE~~LDlHidn  123 (268)
                      ...+.|.+  |||.|.+...|..|+..
T Consensus         6 ~k~~~C~~~~C~k~f~~~~~L~~H~~~   32 (37)
T 1va1_A            6 KKQHICHIQGCGKVYGKTSHLRAHLRW   32 (37)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            34578985  99999999999999864

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=87.11  E-value=0.25  Score=30.73  Aligned_cols=29  Identities=17%  Similarity=0.294  Sum_probs=23.6

Q ss_pred             hhcCcccccc--cccccCCchhhHhhhhhcc
Q 024416           96 HVDINEWRCG--YCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        96 h~~~h~wrC~--~CgK~F~sE~~LDlHidnr  124 (268)
                      |.....++|.  .|+|.|.+...|..|+...
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H   37 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSH   37 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTTS
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHh
Confidence            3344568998  8999999999999998653

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=86.88  E-value=0.2  Score=32.11  Aligned_cols=23  Identities=22%  Similarity=0.330  Sum_probs=20.3

Q ss_pred             cccccc--ccccCCchhhHhhhhhc
Q 024416          101 EWRCGY--CKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       101 ~wrC~~--CgK~F~sE~~LDlHidn  123 (268)
                      .++|.+  |+|.|.+...|..|+..
T Consensus         9 p~~C~~~~C~k~F~~~~~L~~H~r~   33 (38)
T 2eln_A            9 LLKCPTDGCDYSTPDKYKLQAHLKV   33 (38)
T ss_dssp             CEECSSSSCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCccCCHHHHHHHHHh
Confidence            478986  99999999999999853

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=86.00  E-value=0.38  Score=31.34  Aligned_cols=38  Identities=11%  Similarity=0.229  Sum_probs=28.4

Q ss_pred             cCCCCCCCCCCccccchhhhhhhhc-Ccc----cccccccccCCc
Q 024416           74 ISSKCRLHPDNDMFRDQEQHKIHVD-INE----WRCGYCKKSFRA  113 (268)
Q Consensus        74 l~~~C~L~P~~D~F~~~E~~k~h~~-~h~----wrC~~CgK~F~s  113 (268)
                      -|-.|+.-  ...|.....++.|.. .|.    +.|..|+|.|.+
T Consensus        11 k~~~C~~C--~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           11 KPYICQSC--GKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCEECSSS--CCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCeECCCC--CcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            34567653  357988888888874 554    799999999976

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=85.99  E-value=0.28  Score=29.08  Aligned_cols=25  Identities=24%  Similarity=0.494  Sum_probs=21.2

Q ss_pred             cccccc--cccccCCchhhHhhhhhcc
Q 024416          100 NEWRCG--YCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus       100 h~wrC~--~CgK~F~sE~~LDlHidnr  124 (268)
                      -.+.|.  .|||.|.+...|..|+...
T Consensus         5 k~~~C~~~~C~k~f~~~~~L~~H~~~H   31 (38)
T 1bhi_A            5 KPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             cceECCCCCCCcccCCHHHHHHHHHHh
Confidence            357899  5999999999999998643

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=85.59  E-value=0.27  Score=32.10  Aligned_cols=26  Identities=27%  Similarity=0.565  Sum_probs=24.6

Q ss_pred             cccccccccCCchhhHhhhhhccccc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      +.|..|.|.|.+..-|-.|+++-|.+
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            68999999999999999999999975

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=84.72  E-value=0.39  Score=31.64  Aligned_cols=26  Identities=31%  Similarity=0.676  Sum_probs=24.3

Q ss_pred             ccccccccCCchhhHhhhhhcccccc
Q 024416          103 RCGYCKKSFRAEKFLDQHFDNRHNNL  128 (268)
Q Consensus       103 rC~~CgK~F~sE~~LDlHidnrH~~l  128 (268)
                      .|.+|+|.+..-+-|-.||.+-|++.
T Consensus        11 hcrfckkkysdvknlikhire~hd~~   36 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHDPQ   36 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            59999999999999999999999874

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=83.41  E-value=0.31  Score=30.95  Aligned_cols=31  Identities=16%  Similarity=0.335  Sum_probs=24.6

Q ss_pred             hhhhhcCcccccc--cccccCCchhhHhhhhhc
Q 024416           93 HKIHVDINEWRCG--YCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus        93 ~k~h~~~h~wrC~--~CgK~F~sE~~LDlHidn  123 (268)
                      +..|...-.+.|.  .|||.|.....|..|+..
T Consensus        10 ~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~   42 (47)
T 1ncs_A           10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             SCEEETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             HhccCCCCCeECCCCCCCCccCCHHHHHHHHHH
Confidence            3345555678996  699999999999999864

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=83.11  E-value=0.37  Score=36.27  Aligned_cols=29  Identities=24%  Similarity=0.462  Sum_probs=24.5

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |...-.+.|..|||.|.+...|..|+.. |
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~-H   97 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRY-T   97 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHH-T
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHH-C
Confidence            3345668999999999999999999965 5

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=82.51  E-value=0.15  Score=34.07  Aligned_cols=47  Identities=21%  Similarity=0.249  Sum_probs=32.7

Q ss_pred             CCCCCCCCCCccccchhhhhhhhcCcccccccccccCCchhhHhhhhhcccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHVDINEWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      |-.|+.-.  ..|.....++.   ...+.|..|||.|.+...|..|+...+.
T Consensus        18 ~~~C~~C~--k~f~~~~~l~~---~~~~~C~~C~~~f~~~~~l~~H~~~H~~   64 (73)
T 2ctu_A           18 SQKCSKCG--IIFIRRSTLSR---RKTPMCEKCRKDSCQEAALNKDEGNESG   64 (73)
T ss_dssp             EEECSSSC--CEEECCCCCCC---SSSCCCHHHHHTCSCCCSSCCCSSCCCC
T ss_pred             CeeCCccc--chhCCHHHhCc---CCCCCCCCCChhhcCHHHHHHHHHhhcC
Confidence            34555432  35555554444   4568999999999999999999876443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=81.59  E-value=0.61  Score=34.63  Aligned_cols=27  Identities=22%  Similarity=0.363  Sum_probs=23.6

Q ss_pred             cCcccccccccccC-CchhhHhhhhhcc
Q 024416           98 DINEWRCGYCKKSF-RAEKFLDQHFDNR  124 (268)
Q Consensus        98 ~~h~wrC~~CgK~F-~sE~~LDlHidnr  124 (268)
                      ....+.|..|||.| .+...|..|+...
T Consensus        31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~h   58 (96)
T 2ctd_A           31 DKGSVSCPTCQAVGRKTIEGLKKHMENC   58 (96)
T ss_dssp             HTSCEECTTTCSCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCCCcccCHHHHHHHHHHH
Confidence            55678999999999 8999999999753

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.40  E-value=1  Score=31.71  Aligned_cols=27  Identities=19%  Similarity=0.190  Sum_probs=23.6

Q ss_pred             cccccccccCCchhhHhhhhhcccccc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDNRHNNL  128 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidnrH~~l  128 (268)
                      ..|..|+|.|.+...|..|+...|..-
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~   52 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGG   52 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCC
Confidence            369999999999999999998877653

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=80.94  E-value=0.54  Score=32.08  Aligned_cols=40  Identities=23%  Similarity=0.612  Sum_probs=28.7

Q ss_pred             ccccccc--ccccCCchhhHhhhhhccccccccCCccCchhhhcc
Q 024416          100 NEWRCGY--CKKSFRAEKFLDQHFDNRHNNLLNVSHGKCLADLCG  142 (268)
Q Consensus       100 h~wrC~~--CgK~F~sE~~LDlHidnrH~~ll~~~~~~CLaD~Cd  142 (268)
                      ..+.|..  |+|.|.+...|..|+...|..-   ..-.|-.++|+
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~---~~~~C~~~~C~   47 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ---KSFSCPEPACG   47 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGGSC---CCEECSCTTTC
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhCCC---CCeECCCCCCc
Confidence            3467887  9999999999999998767532   22355545554

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=80.58  E-value=0.5  Score=33.70  Aligned_cols=49  Identities=18%  Similarity=0.191  Sum_probs=31.7

Q ss_pred             CCCCCCCCCCccccchhhhhhhh---cCcccccccccccCCchhhHhhhhhccccc
Q 024416           75 SSKCRLHPDNDMFRDQEQHKIHV---DINEWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        75 ~~~C~L~P~~D~F~~~E~~k~h~---~~h~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      +..|++-  ...|. ..+++.|.   ..-...|.+|+|.|. ...|+.|++.....
T Consensus        17 ~~~C~~C--~~~~~-~~~L~~H~~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A           17 LAVCQHC--DLELS-ILKLKEHEDYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CEECSSS--CCEEC-HHHHHHHHHHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             ccCCccc--ChHhh-HHHHHHHHhHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            3445442  33442 44444444   556789999999988 48999999875544

>3ax1_A Serrate RNA effector molecule; miRNA processing, protein binding; 2.74A {Arabidopsis thaliana}

Probab=80.50  E-value=0.34  Score=46.01  Aligned_cols=31  Identities=32%  Similarity=0.750  Sum_probs=27.5

Q ss_pred             ccccc--cccccCCchhhHhhhhhccccccccC
Q 024416          101 EWRCG--YCKKSFRAEKFLDQHFDNRHNNLLNV  131 (268)
Q Consensus       101 ~wrC~--~CgK~F~sE~~LDlHidnrH~~ll~~  131 (268)
                      .|+|+  .|+|=|....|+-+||.|.|..++..
T Consensus       304 K~~C~~~~C~KLFk~~eFV~KHi~~KH~e~v~~  336 (358)
T 3ax1_A          304 KYGCGAKGCTKLFHAAEFVYKHLKLKHTELVTE  336 (358)
T ss_dssp             EEEECSSSCCCEESSHHHHHHHHHHHCHHHHHH
T ss_pred             ccCCCCCCcCcccCCHHHHHHHHHhccHHHHHH
Confidence            35995  89999999999999999999987763

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=80.18  E-value=0.51  Score=36.24  Aligned_cols=27  Identities=22%  Similarity=0.539  Sum_probs=23.9

Q ss_pred             cccccccccccCCchhhHhhhhhcccc
Q 024416          100 NEWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus       100 h~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      -.+.|.+|||.|.+...|..|+...|.
T Consensus        17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~   43 (102)
T 2ghf_A           17 GGYECKYCTFQTPDLNMFTFHVDSEHP   43 (102)
T ss_dssp             SSEECSSCSCEESCHHHHHHHHHHHCS
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhhCC
Confidence            457899999999999999999987674

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	268
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.78
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	94.53
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	94.27
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	94.25
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	94.14
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	94.07
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	93.97
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	93.95
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	93.02
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	92.98
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	92.25
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	90.75
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	89.96
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	89.25
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	89.0
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	88.52
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	88.08
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	86.79
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	86.3
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	84.85
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	84.84
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	84.74
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	84.7
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	84.32
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	83.77
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	83.22
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	82.24
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	80.05

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.78  E-value=0.0041  Score=40.03  Aligned_cols=27  Identities=26%  Similarity=0.602  Sum_probs=24.2

Q ss_pred             ccccccccccCCchhhHhhhhhccccc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      -+.|.+|||.|.....|..||..-|..
T Consensus         5 py~C~~Cgk~F~~~~~L~~H~r~~Ht~   31 (39)
T d2epsa1           5 PYICQSCGKGFSRPDHLNGHIKQVHTS   31 (39)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHTSCC
T ss_pred             CccCCCCCCCcCChHHhhccCcCccCC
Confidence            478999999999999999999887764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.53  E-value=0.0065  Score=38.12  Aligned_cols=33  Identities=33%  Similarity=0.770  Sum_probs=27.1

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhccccc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      +|-..--+.|.+|||+|.....|..|+...|+.
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            344455689999999999999999999877753

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.27  E-value=0.0072  Score=38.01  Aligned_cols=32  Identities=19%  Similarity=0.471  Sum_probs=27.2

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      |-..--++|.+|||.|.....|..|+...|..
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            44445689999999999999999999988864

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.25  E-value=0.006  Score=36.40  Aligned_cols=21  Identities=29%  Similarity=0.513  Sum_probs=19.1

Q ss_pred             cccccccccCCchhhHhhhhh
Q 024416          102 WRCGYCKKSFRAEKFLDQHFD  122 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHid  122 (268)
                      +.|.+|||.|.....|-+|..
T Consensus         3 y~C~eCgK~F~~~s~L~~Hqr   23 (26)
T d1x6ea2           3 YKCLECGKAFSQNSGLINHQR   23 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHHH
T ss_pred             ccCCCCcCeeccCcccccCcc
Confidence            579999999999999999964

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.14  E-value=0.0086  Score=36.21  Aligned_cols=22  Identities=27%  Similarity=0.658  Sum_probs=20.3

Q ss_pred             cccccccccCCchhhHhhhhhc
Q 024416          102 WRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      +.|.+|||+|.....|..|+..
T Consensus         3 y~C~~C~k~F~~~s~L~~H~r~   24 (29)
T d1sp1a_           3 FACPECPKRFMRSDHLSKHIKT   24 (29)
T ss_dssp             SCCTTTTCCCSCSHHHHHHHHG
T ss_pred             EECCcCCCeecchHHhhhhcCc
Confidence            6899999999999999999864

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=94.07  E-value=0.0095  Score=35.93  Aligned_cols=21  Identities=24%  Similarity=0.825  Sum_probs=19.7

Q ss_pred             cccccccccCCchhhHhhhhh
Q 024416          102 WRCGYCKKSFRAEKFLDQHFD  122 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHid  122 (268)
                      +.|.+|||.|.....|..|+.
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~r   23 (29)
T d2adra1           3 FVCEVCTRAFARQEHLKRHYR   23 (29)
T ss_dssp             BCCTTTCCCBSCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCchHcccccC
Confidence            689999999999999999985

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.97  E-value=0.013  Score=38.49  Aligned_cols=40  Identities=25%  Similarity=0.581  Sum_probs=32.2

Q ss_pred             CCccccchhhhhhhhcC----cccccccccccCCchhhHhhhhh
Q 024416           83 DNDMFRDQEQHKIHVDI----NEWRCGYCKKSFRAEKFLDQHFD  122 (268)
Q Consensus        83 ~~D~F~~~E~~k~h~~~----h~wrC~~CgK~F~sE~~LDlHid  122 (268)
                      ..-.|.....++.|..+    -.+.|.+|||.|.+...|..|+.
T Consensus         8 Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1           8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT
T ss_pred             CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHh
Confidence            44578888888777743    44899999999999999999973

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.95  E-value=0.01  Score=37.28  Aligned_cols=27  Identities=19%  Similarity=0.497  Sum_probs=23.2

Q ss_pred             ccccccccccCCchhhHhhhhhcccccc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDNRHNNL  128 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidnrH~~l  128 (268)
                      -++|.+|+|.|.....|..|+. .|.+-
T Consensus         7 Py~C~~C~k~F~~~~~L~~H~r-~Ht~~   33 (35)
T d1srka_           7 PFVCRICLSAFTTKANCARHLK-VHTDT   33 (35)
T ss_dssp             CEECSSSCCEESSHHHHHHHHG-GGTSC
T ss_pred             cccCCCCCCcccChHHHHHHcc-ccCCc
Confidence            4789999999999999999984 57654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.02  E-value=0.014  Score=35.12  Aligned_cols=21  Identities=24%  Similarity=0.732  Sum_probs=19.6

Q ss_pred             cccccccccCCchhhHhhhhh
Q 024416          102 WRCGYCKKSFRAEKFLDQHFD  122 (268)
Q Consensus       102 wrC~~CgK~F~sE~~LDlHid  122 (268)
                      +.|.+|||.|.....|..|+.
T Consensus         4 y~C~~C~k~F~~~~~L~~H~r   24 (28)
T d1a1ia2           4 FQCRICMRNFSRSDHLTTHIR   24 (28)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             ccCCCCcCEecccccccccCC
Confidence            689999999999999999985

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.98  E-value=0.02  Score=36.09  Aligned_cols=29  Identities=24%  Similarity=0.468  Sum_probs=24.0

Q ss_pred             hhhcCcccccccccccCCchhhHhhhhhc
Q 024416           95 IHVDINEWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus        95 ~h~~~h~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      +|-..--+.|.+|||+|.....|..|+..
T Consensus         6 ~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~   34 (38)
T d2cota2           6 QQRERRRYKCDECGKSFSHSSDLSKHRRT   34 (38)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTT
T ss_pred             ccCCCCCEecCCCCceeeCHHHHHHhCcc
Confidence            34455668999999999999999999753

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.25  E-value=0.025  Score=35.03  Aligned_cols=27  Identities=30%  Similarity=0.500  Sum_probs=22.7

Q ss_pred             hhcCcccccccccccCCchhhHhhhhh
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFD  122 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHid  122 (268)
                      |-..--+.|.+|||+|.....|..|+.
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r   28 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQR   28 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHH
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhcc
Confidence            344556899999999999999999975

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.75  E-value=0.055  Score=33.78  Aligned_cols=29  Identities=31%  Similarity=0.646  Sum_probs=23.8

Q ss_pred             hhcCcccccccccccCCchhhHhhhhhccc
Q 024416           96 HVDINEWRCGYCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus        96 h~~~h~wrC~~CgK~F~sE~~LDlHidnrH  125 (268)
                      |-..--+.|.+|||+|.....|..|+. .|
T Consensus         6 HTgeKPy~C~~C~k~F~~~~~L~~H~r-~H   34 (37)
T d1p7aa_           6 STGIKPFQCPDCDRSFSRSDHLALHRK-RH   34 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHG-GG
T ss_pred             cCCccCeEeCCCCCEecCHHHHHHHHh-cC
Confidence            444556899999999999999999974 44

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.96  E-value=0.058  Score=31.98  Aligned_cols=20  Identities=30%  Similarity=0.659  Sum_probs=18.3

Q ss_pred             ccccccccCCchhhHhhhhh
Q 024416          103 RCGYCKKSFRAEKFLDQHFD  122 (268)
Q Consensus       103 rC~~CgK~F~sE~~LDlHid  122 (268)
                      +|..|.|.|-+.+||..|-.
T Consensus         2 qcp~c~k~f~skyylkvhnr   21 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNR   21 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHH
T ss_pred             cCcchHHHHHHhHhhhhccc
Confidence            79999999999999999854

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.25  E-value=0.05  Score=34.10  Aligned_cols=22  Identities=32%  Similarity=0.516  Sum_probs=19.1

Q ss_pred             ccccccccccCCchhhHhhhhh
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFD  122 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHid  122 (268)
                      +.-|..|||.|..-++|+.|--
T Consensus         5 ~~~ce~cgk~frdvyhlnrhkl   26 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKL   26 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGG
T ss_pred             hhhHHHHHHHHHHHHHHHhhhc
Confidence            4579999999999999999853

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.00  E-value=0.079  Score=32.06  Aligned_cols=21  Identities=29%  Similarity=0.774  Sum_probs=19.4

Q ss_pred             ccccc--ccccCCchhhHhhhhh
Q 024416          102 WRCGY--CKKSFRAEKFLDQHFD  122 (268)
Q Consensus       102 wrC~~--CgK~F~sE~~LDlHid  122 (268)
                      ++|.+  |||.|.....|..|+.
T Consensus         3 ~~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d2glia3           3 HKCTFEGCRKSYSRLENLKTHLR   25 (30)
T ss_dssp             CCCCSTTCCCCCSSHHHHHHHHH
T ss_pred             eeCCCCCCCceECChhHhhhhcC
Confidence            68999  9999999999999984

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.52  E-value=0.083  Score=33.76  Aligned_cols=27  Identities=33%  Similarity=0.829  Sum_probs=23.2

Q ss_pred             CcccccccccccCCchhhHhhhhhcccc
Q 024416           99 INEWRCGYCKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus        99 ~h~wrC~~CgK~F~sE~~LDlHidnrH~  126 (268)
                      .-.+.|.+|+|.|+|-..|-=|| +.|.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~-~~Hr   29 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHM-NVHR   29 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHH-HTTC
T ss_pred             CCccCCCCCCCccCCcccccchH-hhhc
Confidence            34678999999999999999998 6665

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.08  E-value=0.068  Score=34.80  Aligned_cols=25  Identities=32%  Similarity=0.594  Sum_probs=21.0

Q ss_pred             ccccccccccCCchhhHhhhhhccccc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDNRHNN  127 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidnrH~~  127 (268)
                      -++| .|||+|.....|..|+. .|..
T Consensus         3 ~y~C-~Cgk~F~~~~~l~~H~~-~Ht~   27 (53)
T d2csha1           3 LYPC-QCGKSFTHKSQRDRHMS-MHLG   27 (53)
T ss_dssp             CEEC-TTSCEESSHHHHHHHHH-HHSC
T ss_pred             CCCC-CCCCeECCHHHhHHHhh-cccc
Confidence            3789 69999999999999974 5653

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.79  E-value=0.1  Score=31.19  Aligned_cols=22  Identities=27%  Similarity=0.406  Sum_probs=18.9

Q ss_pred             ccccccccccCCchhhHhhhhh
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFD  122 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHid  122 (268)
                      ...|.+|||.|-...-|..|+-
T Consensus         2 ~hvc~ecgkaf~essklkrh~l   23 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQL   23 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGG
T ss_pred             cchHHHHhHHHHHHHHHHHHhh
Confidence            3579999999999999998863

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.30  E-value=0.11  Score=31.37  Aligned_cols=21  Identities=29%  Similarity=0.721  Sum_probs=19.2

Q ss_pred             ccccc--ccccCCchhhHhhhhh
Q 024416          102 WRCGY--CKKSFRAEKFLDQHFD  122 (268)
Q Consensus       102 wrC~~--CgK~F~sE~~LDlHid  122 (268)
                      +.|.+  |||.|.....|..|+.
T Consensus         3 ~~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d1ubdc3           3 FQCTFEGCGKRFSLDFNLRTHVR   25 (30)
T ss_dssp             EECCSTTCCCEESCHHHHHHHHH
T ss_pred             ccCCCCCCCceECcHHHcCcccc
Confidence            57988  9999999999999985

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.85  E-value=0.21  Score=30.47  Aligned_cols=22  Identities=27%  Similarity=0.558  Sum_probs=19.3

Q ss_pred             ccccc--ccccCCchhhHhhhhhc
Q 024416          102 WRCGY--CKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       102 wrC~~--CgK~F~sE~~LDlHidn  123 (268)
                      +.|.+  |||.|.....|..|+..
T Consensus         4 ~~C~~pgC~k~F~r~~~L~~H~r~   27 (32)
T d1zfda_           4 YSCDHPGCDKAFVRNHDLIRHKKS   27 (32)
T ss_dssp             BCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred             eECcCCCCCCeeCCHHHHHHHhhh
Confidence            57888  99999999999999754

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.84  E-value=0.14  Score=31.93  Aligned_cols=24  Identities=38%  Similarity=0.749  Sum_probs=20.9

Q ss_pred             ccccc--ccccCCchhhHhhhhhcccc
Q 024416          102 WRCGY--CKKSFRAEKFLDQHFDNRHN  126 (268)
Q Consensus       102 wrC~~--CgK~F~sE~~LDlHidnrH~  126 (268)
                      +.|.+  |||.|.....|..|+.. |.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~-Ht   27 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKL-HS   27 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHH-HH
T ss_pred             eECCCCCCCCeeCChhHhccccCe-eC
Confidence            67887  99999999999999876 43

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.74  E-value=0.16  Score=34.29  Aligned_cols=23  Identities=35%  Similarity=0.572  Sum_probs=20.0

Q ss_pred             ccccccccccCCchhhHhhhhhc
Q 024416          101 EWRCGYCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       101 ~wrC~~CgK~F~sE~~LDlHidn  123 (268)
                      -.-|+.|||.|+.+.-|.+|-..
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQ   28 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQ   28 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHh
Confidence            46799999999999999999554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.70  E-value=0.14  Score=30.74  Aligned_cols=21  Identities=24%  Similarity=0.643  Sum_probs=18.9

Q ss_pred             ccccc--ccccCCchhhHhhhhh
Q 024416          102 WRCGY--CKKSFRAEKFLDQHFD  122 (268)
Q Consensus       102 wrC~~--CgK~F~sE~~LDlHid  122 (268)
                      +.|.+  |||.|.+...|..|+.
T Consensus         3 ~~C~~~gC~k~F~~~~~L~~H~r   25 (29)
T d1a1ia1           3 YACPVESCDRRFSRSADLTRHIR   25 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHTH
T ss_pred             eECCCCCCCcEECchhHhhhhcC
Confidence            57888  9999999999999974

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.32  E-value=0.14  Score=33.60  Aligned_cols=31  Identities=16%  Similarity=0.432  Sum_probs=25.5

Q ss_pred             hhhhhcCccccccc--ccccCCchhhHhhhhhc
Q 024416           93 HKIHVDINEWRCGY--CKKSFRAEKFLDQHFDN  123 (268)
Q Consensus        93 ~k~h~~~h~wrC~~--CgK~F~sE~~LDlHidn  123 (268)
                      +-.|...--+.|.+  |||.|.....|..|+..
T Consensus        10 h~~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~   42 (47)
T d1ncsa_          10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             SCEEETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             hhhccCCCCeECCcCCCCccccCchHHHhhccc
Confidence            33455667899998  99999999999999753

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.77  E-value=0.19  Score=29.96  Aligned_cols=21  Identities=29%  Similarity=0.695  Sum_probs=18.8

Q ss_pred             ccccc--ccccCCchhhHhhhhh
Q 024416          102 WRCGY--CKKSFRAEKFLDQHFD  122 (268)
Q Consensus       102 wrC~~--CgK~F~sE~~LDlHid  122 (268)
                      +.|.+  |||+|-....|..|+.
T Consensus         3 f~C~~~gC~K~F~~~~~L~~H~r   25 (28)
T d1ubdc4           3 YVCPFDGCNKKFAQSTNLKSHIL   25 (28)
T ss_dssp             CCCCSTTCCCCCSSTTTTHHHHH
T ss_pred             cCCCCCCcCCcCCCHHHHHHHHh
Confidence            56888  9999999999999985

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.22  E-value=0.17  Score=30.47  Aligned_cols=20  Identities=25%  Similarity=0.625  Sum_probs=17.8

Q ss_pred             cccccCCchhhHhhhhhccc
Q 024416          106 YCKKSFRAEKFLDQHFDNRH  125 (268)
Q Consensus       106 ~CgK~F~sE~~LDlHidnrH  125 (268)
                      -|||.|.+..||+-|..-.|
T Consensus         7 gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           7 GCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TTCCEESSHHHHHHHHHHGG
T ss_pred             CchhhhccHHHHHhHHHHHH
Confidence            39999999999999987766

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.24  E-value=0.21  Score=35.26  Aligned_cols=27  Identities=26%  Similarity=0.448  Sum_probs=23.8

Q ss_pred             cCcccccccccccCCchhhHhhhhhcc
Q 024416           98 DINEWRCGYCKKSFRAEKFLDQHFDNR  124 (268)
Q Consensus        98 ~~h~wrC~~CgK~F~sE~~LDlHidnr  124 (268)
                      ...+|-|..|+|.|.|+.-|..|+...
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ksK   38 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRSK   38 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CCCEEecccccCccCCHHHHHHHHccc
Confidence            457899999999999999999998643

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.05  E-value=0.37  Score=28.98  Aligned_cols=22  Identities=32%  Similarity=0.694  Sum_probs=18.8

Q ss_pred             cccc--cccccCCchhhHhhhhhc
Q 024416          102 WRCG--YCKKSFRAEKFLDQHFDN  123 (268)
Q Consensus       102 wrC~--~CgK~F~sE~~LDlHidn  123 (268)
                      +.|.  .|||.|.....|..|+..
T Consensus         3 f~C~~~~C~k~F~~~~~L~~H~r~   26 (31)
T d1sp2a_           3 FMCTWSYCGKRFTRSDELQRHKRT   26 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred             CCCcCCCCCcCcCChhHhhhhcCc
Confidence            4675  599999999999999953