Citrus Sinensis ID: 024426

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
MSFQDLQNGSRSSPSSSSKSPSQAVAAGIFQINTAVAAFRRLVDAIGTSKDTLDHRQKLHNTRQRILQLVKDTSAKLKSVSESDRDTDVNQNKKVEDAKLARDFQTVLQEFQKIQQLASERESTYSPSVPPSSAPPSTTDTSGSGDFMGSENQPFLMEQKRQELFLLDNEIAFNEAIIEEREHGLREIEEQIGQANEIFKDLAVLVHEQGVVIDDISSNIESSAATTTHARVQLAKASKNVKSRSSWCWWVLAIIVVALVILLLVFIL
cccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHc
************************VAAGIFQINTAVAAFRRLVDAIGTSKD********HNTRQRILQLVK*******************************************************************************************ELFLLDNEIAFNEAIIEEREHGLREIEEQIGQANEIFKDLAVLVHEQGVVIDDISSNIESSAATTTHARVQLAKASKNVKSRSSWCWWVLAIIVVALVILLLVFIL
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSFQDLQNGSRSSPSSSSKSPSQAVAAGIFQINTAVAAFRRLVDAIGTSKDTLDHRQKLHNTRQRILQLVKDTSAKLKSVSESDRDTDVNQNKKVEDAKLARDFQTVLQEFQKIQQLASERESTYSPSVPPSSAPPSTTDTSGSGDFMGSENQPFLMEQKRQELFLLDNEIAFNEAIIEEREHGLREIEEQIGQANEIFKDLAVLVHEQGVVIDDISSNIESSAATTTHARVQLAKASKNVKSRSSWCWWVLAIIVVALVILLLVFIL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Syntaxin-22 May provide the t-SNARE function in the vacuolar assembly.probableP93654
Syntaxin-7 May be involved in protein trafficking from the plasma membrane to the early endosome (EE) as well as in homotypic fusion of endocytic organelles. Mediates the endocytic trafficking from early endosomes to late endosomes and lysosomes.probableQ5R602
Syntaxin-7 May be involved in protein trafficking from the plasma membrane to the early endosome (EE) as well as in homotypic fusion of endocytic organelles. Mediates the endocytic trafficking from early endosomes to late endosomes and lysosomes.probableO70439

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1DN1, chain B
Confidence level:very confident
Coverage over the Query: 18-231
View the alignment between query and template
View the model in PyMOL