Citrus Sinensis ID: 024446

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------
MTAMHCHFTGRNFISKSLSTFLPLLSIVQTQAMAVTIHNALPSLNALKSKSIIRNRPESRRVSANSVRCCQVATSDKQSITVSNGNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQLRIGKFIPFLNPL
cccccccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEccccccccccEEEcccccccccHHcccccccccccccccHHHHHHHHHHHHHcccccEEccccccHHHHHHHHHHHHccccccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHccccccEEEEcccccccccHHHHHHHHHHHHHcccccEEEcccccHHHHHHHHHccccEEEccccccccccccccccc
cccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEcccccccccEEEEEccccccccEccccccEEEEEccccccEEEHHcccccccccccccccHHHHHHHHHHHHHccccEEcccccccccHHHHHHHHcccccccEEEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHcccEEEEEEEEccccccccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHccccHHEEEccccccccccccccc
mtamhchftgrnfISKSLSTFLPLLSIVQTQAMAVTIHNALpslnalksksiirnrpesrrvsansvrccqvatsdkqsitvsngndSLEICRVLNGmwqtsggwgridrDDAVDAMLRYADAglttfdmadhygpaedlYGIFINRvrrerppefldkvrgltkwvpppvkmtssIVRESIdvsrrrmdvpcldmlqfhwwdysnpgyldALNHLTdlkeegkiktvaltnfdtERLRIILEngipvvsnqvqlrigkfipflnpl
MTAMHCHFTGRNFISKSLSTFLPLLSIVQTQAMAVTIHNALpslnalksksiirnrpesrrvsansvrccqvatsdkqsitvsngndSLEICRVLNGmwqtsggwgrIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFINRVRRERPpefldkvrgltkwvpppvkmtssivresidvsrrrMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILengipvvsnqvqlrigkfipflnpl
MTAMHCHFTGRNFISKSLSTFLPLLSIVQTQAMAVTIHNALPSLNALKSKSIIRNRPESRRVSANSVRCCQVATSDKQSITVSNGNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQLRIGKFIPFLNPL
****HCHFTGRNFISKSLSTFLPLLSIVQTQAMAVTIHNALPSLNAL*******************VRCCQVAT****SITVSNGNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQLRIGKFIPFL***
*****CHFTGRNFISKSLSTFLPLLSIVQTQAMAVTIHNALPSLNA***********************************VSNGNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQLRIGKFIPFLNP*
MTAMHCHFTGRNFISKSLSTFLPLLSIVQTQAMAVTIHNALPSLNALKSKSIIRN***************QVATSDKQSITVSNGNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQLRIGKFIPFLNPL
*TAMHCHFTGRNFISKSLSTFLPLLSIVQTQAMAVTIHNALPSLNALKSKSIIRNRPESRRVSANSVRCCQVATSDKQSITVSNGNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQLRIGKFI******
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTAMHCHFTGRNFISKSLSTFLPLLSIVQTQAMAVTIHNALPSLNALKSKSIIRNRPESRRVSANSVRCCQVATSDKQSITVSNGNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQLRIGKFIPFLNPL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query267 2.2.26 [Sep-21-2011]
Q94A68 377 Uncharacterized oxidoredu no no 0.816 0.578 0.289 3e-13
P77256 326 Uncharacterized oxidoredu N/A no 0.573 0.469 0.264 6e-07
Q56Y42 365 Pyridoxal reductase,chlor no no 0.565 0.413 0.263 3e-06
O22707 345 Probable aldo-keto reduct no no 0.573 0.443 0.278 6e-06
Q3L181 337 Perakine reductase OS=Rau N/A no 0.561 0.445 0.278 6e-06
A0QV10275 Uncharacterized oxidoredu no no 0.591 0.574 0.284 8e-06
Q84M96 346 Probable aldo-keto reduct no no 0.576 0.445 0.265 2e-05
Q04212 335 D-arabinose 1-dehydrogena yes no 0.449 0.358 0.262 2e-05
C6TBN2 346 Probable aldo-keto reduct no no 0.569 0.439 0.271 2e-05
Q8X529 346 L-glyceraldehyde 3-phosph N/A no 0.561 0.433 0.269 3e-05
>sp|Q94A68|Y1669_ARATH Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1 Back     alignment and function desciption
 Score = 75.9 bits (185), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 107/245 (43%), Gaps = 27/245 (11%)

Query: 33  MAVTIHNALPSLNALKSKSIIRNRPESRRVSANSVRCCQVATSDKQSITVSNGNDSLEIC 92
           MA+  H   P  N + S+     R   R++         VA +  +   V  G   L++ 
Sbjct: 1   MAMATHFTFP-FNYVVSEGSHGRRSFVRKLVRAVASGDSVAPAISEESKVKLGGSDLKVT 59

Query: 93  RVLNGMWQ--TSGGWGRIDRDD-----AVDAMLRYADAGLTTFDMADHYGP--------A 137
           ++  G+W    +  W     DD     A  A     D G+  FD A+ YG         +
Sbjct: 60  KLGIGVWSWGDNSYWNDFQWDDRKLKAAKGAFDTSLDNGIDFFDTAEVYGSKFSLGAISS 119

Query: 138 EDLYGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDML 197
           E L G FI R R+ER P    +V   TK+   P +     V  ++  S  R+++  +D+ 
Sbjct: 120 ETLLGRFI-RERKERYPG--AEVSVATKFAALPWRFGRESVVTALKDSLSRLELSSVDLY 176

Query: 198 QFHWWD-YSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILE----NGIPVVSNQ 252
           Q HW   + N GYLD L    D  E+G +K V ++N+  +RLR   E     GIP+ SNQ
Sbjct: 177 QLHWPGLWGNEGYLDGLG---DAVEQGLVKAVGVSNYSEKRLRDAYERLKKRGIPLASNQ 233

Query: 253 VQLRI 257
           V   +
Sbjct: 234 VNYSL 238

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -
>sp|P77256|YDJG_ECOLI Uncharacterized oxidoreductase YdjG OS=Escherichia coli (strain K12) GN=ydjG PE=3 SV=1 Back     alignment and function description
>sp|Q56Y42|PLR1_ARATH Pyridoxal reductase,chloroplastic OS=Arabidopsis thaliana GN=PLR1 PE=1 SV=1 Back     alignment and function description
>sp|O22707|ALKR3_ARATH Probable aldo-keto reductase 3 OS=Arabidopsis thaliana GN=At1g60690 PE=3 SV=1 Back     alignment and function description
>sp|Q3L181|PERR_RAUSE Perakine reductase OS=Rauvolfia serpentina GN=PR PE=1 SV=1 Back     alignment and function description
>sp|A0QV10|Y2408_MYCS2 Uncharacterized oxidoreductase MSMEG_2408/MSMEI_2347 OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_2408 PE=1 SV=1 Back     alignment and function description
>sp|Q84M96|ALKR2_ARATH Probable aldo-keto reductase 2 OS=Arabidopsis thaliana GN=AGD2 PE=1 SV=1 Back     alignment and function description
>sp|Q04212|ARA2_YEAST D-arabinose 1-dehydrogenase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARA2 PE=1 SV=1 Back     alignment and function description
>sp|C6TBN2|AKR1_SOYBN Probable aldo-keto reductase 1 OS=Glycine max GN=AKR1 PE=2 SV=1 Back     alignment and function description
>sp|Q8X529|GPR_ECO57 L-glyceraldehyde 3-phosphate reductase OS=Escherichia coli O157:H7 GN=gpr PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query267
225436289 384 PREDICTED: putative aryl-alcohol dehydro 0.853 0.593 0.766 1e-98
224105045 381 predicted protein [Populus trichocarpa] 0.812 0.569 0.763 3e-98
255576337 379 aldo-keto reductase, putative [Ricinus c 0.820 0.577 0.742 3e-96
356550119 387 PREDICTED: putative aryl-alcohol dehydro 0.730 0.503 0.852 5e-96
449456124 387 PREDICTED: putative aryl-alcohol dehydro 0.857 0.591 0.746 1e-94
297822521 386 aldo/keto reductase family protein [Arab 0.861 0.595 0.722 2e-94
18401495 384 NAD(P)-linked oxidoreductase-like protei 0.857 0.596 0.721 4e-94
356543572 388 PREDICTED: putative aryl-alcohol dehydro 0.696 0.479 0.872 2e-93
147866709344 hypothetical protein VITISV_030551 [Viti 0.692 0.537 0.864 5e-92
297826189 386 predicted protein [Arabidopsis lyrata su 0.861 0.595 0.696 1e-91
>gi|225436289|ref|XP_002265600.1| PREDICTED: putative aryl-alcohol dehydrogenase C977.14c isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 177/231 (76%), Positives = 196/231 (84%), Gaps = 3/231 (1%)

Query: 33  MAVTIHNALPSLNALKS-KSIIRNRPESRRVSANSVRCCQVATSDKQSITVSNGNDSLEI 91
           MAVT+H     L++    ++ +  RP SR+  ANSVRC    + + Q +TV NGNDSL+I
Sbjct: 1   MAVTVHPVCSHLSSFHPVRTRLTTRPVSRKFGANSVRCD--GSIETQRVTVKNGNDSLDI 58

Query: 92  CRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFINRVRRE 151
           CRVLNGMWQTSGGWGRIDR+DAV+AMLRYADAGL+TFDMADHYGPAEDLYGIFINRVRRE
Sbjct: 59  CRVLNGMWQTSGGWGRIDRNDAVEAMLRYADAGLSTFDMADHYGPAEDLYGIFINRVRRE 118

Query: 152 RPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLD 211
           RPPEF+DKVRGLTKWVPPPVKMTS+ VRESI+VSR+RMDV  LDMLQFHWWDYSN GYLD
Sbjct: 119 RPPEFVDKVRGLTKWVPPPVKMTSNFVRESINVSRKRMDVAALDMLQFHWWDYSNTGYLD 178

Query: 212 ALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQLRIGKFIP 262
           AL HLTDLKEEGKIKTVALTNFDTERL+IILEN IPVVSNQVQ  I    P
Sbjct: 179 ALKHLTDLKEEGKIKTVALTNFDTERLQIILENEIPVVSNQVQHSIVDMRP 229

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224105045|ref|XP_002313665.1| predicted protein [Populus trichocarpa] gi|222850073|gb|EEE87620.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255576337|ref|XP_002529061.1| aldo-keto reductase, putative [Ricinus communis] gi|223531473|gb|EEF33305.1| aldo-keto reductase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356550119|ref|XP_003543437.1| PREDICTED: putative aryl-alcohol dehydrogenase C977.14c-like [Glycine max] Back     alignment and taxonomy information
>gi|449456124|ref|XP_004145800.1| PREDICTED: putative aryl-alcohol dehydrogenase C750.01-like [Cucumis sativus] gi|449518433|ref|XP_004166246.1| PREDICTED: putative aryl-alcohol dehydrogenase C750.01-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297822521|ref|XP_002879143.1| aldo/keto reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297324982|gb|EFH55402.1| aldo/keto reductase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18401495|ref|NP_565656.1| NAD(P)-linked oxidoreductase-like protein [Arabidopsis thaliana] gi|14326473|gb|AAK60282.1|AF385689_1 At2g27680/F15K20.22 [Arabidopsis thaliana] gi|3860264|gb|AAC73032.1| expressed protein [Arabidopsis thaliana] gi|18700198|gb|AAL77709.1| At2g27680/F15K20.22 [Arabidopsis thaliana] gi|330252931|gb|AEC08025.1| NAD(P)-linked oxidoreductase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356543572|ref|XP_003540234.1| PREDICTED: putative aryl-alcohol dehydrogenase C977.14c-like [Glycine max] Back     alignment and taxonomy information
>gi|147866709|emb|CAN82646.1| hypothetical protein VITISV_030551 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297826189|ref|XP_002880977.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297326816|gb|EFH57236.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query267
TAIR|locus:2042124 384 AT2G27680 "AT2G27680" [Arabido 0.827 0.575 0.738 8.6e-88
DICTYBASE|DDB_G0292638 332 DDB_G0292638 "Uncharacterized 0.629 0.506 0.432 6.5e-35
TAIR|locus:2009120 377 AT1G06690 "AT1G06690" [Arabido 0.801 0.567 0.294 2.1e-12
ASPGD|ASPL0000078320 463 AN8658 [Emericella nidulans (t 0.333 0.192 0.288 9.6e-11
TIGR_CMR|BA_2003 311 BA_2003 "oxidoreductase, aldo/ 0.456 0.392 0.318 3.3e-08
TIGR_CMR|SPO_A0345 327 SPO_A0345 "oxidoreductase, ald 0.565 0.461 0.301 3.4e-07
ASPGD|ASPL0000072041 351 AN8733 [Emericella nidulans (t 0.595 0.452 0.285 4.5e-06
UNIPROTKB|Q0C2F5 344 HNE_1371 "Dimethylsulfoxide re 0.539 0.418 0.320 5.6e-06
UNIPROTKB|P77256 326 ydjG "methylglyoxal reductase 0.576 0.472 0.271 6.6e-06
TIGR_CMR|BA_2020 300 BA_2020 "oxidoreductase, aldo/ 0.606 0.54 0.229 1.6e-05
TAIR|locus:2042124 AT2G27680 "AT2G27680" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
 Identities = 164/222 (73%), Positives = 188/222 (84%)

Query:    33 MAVTIHNALPSLNALKSKSIIRNRPESRRVSANSVRCCQVATSDKQSITVSNGNDSLEIC 92
             M V++H+ + +  A    S  RN    R +S  SV C    T   +S+ + NGNDSLEIC
Sbjct:     1 MPVSVHSVIATNLATTLSSNYRNVSRRRTIST-SVNCSVEITEADRSVKLKNGNDSLEIC 59

Query:    93 RVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFINRVRRER 152
             RVLNGMWQTSGGWG+IDR+DAVD+MLRYADAGL+TFDMADHYGPAEDLYGIFINRVRRER
Sbjct:    60 RVLNGMWQTSGGWGKIDRNDAVDSMLRYADAGLSTFDMADHYGPAEDLYGIFINRVRRER 119

Query:   153 PPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDA 212
             PPE+L+K++GLTKWVPPP+KMTSS VR++ID+SR+RMDV  LDMLQFHWWDY+N GYLDA
Sbjct:   120 PPEYLEKIKGLTKWVPPPIKMTSSYVRQNIDISRKRMDVAALDMLQFHWWDYANDGYLDA 179

Query:   213 LNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQ 254
             L HLTDLKEEGKIKTVALTNFDTERL+ ILENGIPVVSNQVQ
Sbjct:   180 LKHLTDLKEEGKIKTVALTNFDTERLQKILENGIPVVSNQVQ 221
GO:0004033 "aldo-keto reductase (NADP) activity" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0000096 "sulfur amino acid metabolic process" evidence=RCA
GO:0006098 "pentose-phosphate shunt" evidence=RCA
GO:0006546 "glycine catabolic process" evidence=RCA
GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA
GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA
GO:0006766 "vitamin metabolic process" evidence=RCA
GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA
GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA
GO:0009106 "lipoate metabolic process" evidence=RCA
GO:0009108 "coenzyme biosynthetic process" evidence=RCA
GO:0009117 "nucleotide metabolic process" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA
GO:0009902 "chloroplast relocation" evidence=RCA
GO:0010027 "thylakoid membrane organization" evidence=RCA
GO:0015995 "chlorophyll biosynthetic process" evidence=RCA
GO:0016117 "carotenoid biosynthetic process" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0019748 "secondary metabolic process" evidence=RCA
GO:0019761 "glucosinolate biosynthetic process" evidence=RCA
GO:0034660 "ncRNA metabolic process" evidence=RCA
GO:0042793 "transcription from plastid promoter" evidence=RCA
GO:0044272 "sulfur compound biosynthetic process" evidence=RCA
DICTYBASE|DDB_G0292638 DDB_G0292638 "Uncharacterized oxidoreductase ydjG" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2009120 AT1G06690 "AT1G06690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000078320 AN8658 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2003 BA_2003 "oxidoreductase, aldo/keto reductase family" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_A0345 SPO_A0345 "oxidoreductase, aldo/keto reductase family" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
ASPGD|ASPL0000072041 AN8733 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q0C2F5 HNE_1371 "Dimethylsulfoxide reductase chain B" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] Back     alignment and assigned GO terms
UNIPROTKB|P77256 ydjG "methylglyoxal reductase (NADH-dependent)" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2020 BA_2020 "oxidoreductase, aldo/keto reductase family" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00022043001
SubName- Full=Chromosome chr6 scaffold_25, whole genome shotgun sequence; (384 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query267
cd06660285 cd06660, Aldo_ket_red, Aldo-keto reductases (AKRs) 1e-35
pfam00248 277 pfam00248, Aldo_ket_red, Aldo/keto reductase famil 1e-35
COG0667 316 COG0667, Tas, Predicted oxidoreductases (related t 2e-22
COG0656 280 COG0656, ARA1, Aldo/keto reductases, related to di 7e-14
PRK11565275 PRK11565, dkgA, 2,5-diketo-D-gluconate reductase A 1e-07
PRK09912 346 PRK09912, PRK09912, L-glyceraldehyde 3-phosphate r 2e-05
COG4989 298 COG4989, COG4989, Predicted oxidoreductase [Genera 1e-04
COG1453 391 COG1453, COG1453, Predicted oxidoreductases of the 1e-04
>gnl|CDD|119408 cd06660, Aldo_ket_red, Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols Back     alignment and domain information 
 Score =  128 bits (324), Expect = 1e-35
 Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 14/177 (7%)

Query: 85  GNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGP--AEDLYG 142
           G   L++ R+  G WQ  GG+  +D ++A  A+    DAG+   D AD YG   +E+L G
Sbjct: 5   GKTGLKVSRLGLGTWQLGGGY--VDEEEAAAAVRAALDAGINFIDTADVYGDGESEELLG 62

Query: 143 IFINRVRRERPPEFLDKVRGLTKWVPPPVK---MTSSIVRESIDVSRRRMDVPCLDMLQF 199
             +    +ER P   ++V   TK  P P     ++   +R +++ S +R+    +D+   
Sbjct: 63  EAL----KERGPR--EEVFIATKVGPRPGDGRDLSPEHIRRAVEESLKRLGTDYIDLYLL 116

Query: 200 HWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILEN-GIPVVSNQVQL 255
           HW D   P   + L  L +L +EGKI+ + ++NF  E+L   L   G+P   NQV+ 
Sbjct: 117 HWPDPDTPDIEETLRALEELVKEGKIRAIGVSNFSAEQLEEALAAAGVPPAVNQVEY 173

AKRs are present in all phyla and are of importance to both health and industrial applications. Members have very distinct functions and include the prokaryotic 2,5-diketo-D-gluconic acid reductases and beta-keto ester reductases, the eukaryotic aldose reductases, aldehyde reductases, hydroxysteroid dehydrogenases, steroid 5beta-reductases, potassium channel beta-subunits and aflatoxin aldehyde reductases, among others. Length = 285
>gnl|CDD|215817 pfam00248, Aldo_ket_red, Aldo/keto reductase family Back     alignment and domain information
>gnl|CDD|223739 COG0667, Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|223729 COG0656, ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] Back     alignment and domain information
>gnl|CDD|183203 PRK11565, dkgA, 2,5-diketo-D-gluconate reductase A; Provisional Back     alignment and domain information
>gnl|CDD|182140 PRK09912, PRK09912, L-glyceraldehyde 3-phosphate reductase; Provisional Back     alignment and domain information
>gnl|CDD|227322 COG4989, COG4989, Predicted oxidoreductase [General function prediction only] Back     alignment and domain information
>gnl|CDD|224370 COG1453, COG1453, Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 267
COG0667 316 Tas Predicted oxidoreductases (related to aryl-alc 100.0
KOG1575 336 consensus Voltage-gated shaker-like K+ channel, su 100.0
COG0656 280 ARA1 Aldo/keto reductases, related to diketogulona 100.0
TIGR01293 317 Kv_beta voltage-dependent potassium channel beta s 100.0
PRK09912 346 L-glyceraldehyde 3-phosphate reductase; Provisiona 100.0
PLN02587 314 L-galactose dehydrogenase 100.0
cd06660285 Aldo_ket_red Aldo-keto reductases (AKRs) are a sup 100.0
PRK14863 292 bifunctional regulator KidO; Provisional 100.0
KOG1577 300 consensus Aldo/keto reductase family proteins [Gen 100.0
PRK10625 346 tas putative aldo-keto reductase; Provisional 100.0
PRK11172267 dkgB 2,5-diketo-D-gluconate reductase B; Provision 100.0
PRK10376290 putative oxidoreductase; Provisional 100.0
PRK11565275 dkgA 2,5-diketo-D-gluconate reductase A; Provision 100.0
PF00248 283 Aldo_ket_red: Aldo/keto reductase family; InterPro 100.0
COG4989 298 Predicted oxidoreductase [General function predict 100.0
KOG1576 342 consensus Predicted oxidoreductase [Energy product 99.98
COG1453 391 Predicted oxidoreductases of the aldo/keto reducta 99.97
KOG3023285 consensus Glutamate-cysteine ligase regulatory sub 97.16
PRK13796 365 GTPase YqeH; Provisional 81.51
TIGR01228 545 hutU urocanate hydratase. This model represents th 81.29
PRK05414 556 urocanate hydratase; Provisional 81.08
>COG0667 Tas Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=4e-43  Score=320.91  Aligned_cols=178  Identities=25%  Similarity=0.347  Sum_probs=160.2

Q ss_pred             eeecCCcccccCcceeccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEcCCCCC--CcHHHHHHHHhhhhccCCCccee
Q 024446           81 TVSNGNDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYG--PAEDLYGIFINRVRRERPPEFLD  158 (267)
Q Consensus        81 ~~~lG~tg~~Vs~LGlGt~~~g~~~~~~~~~~~~~~l~~A~d~Gin~fDTA~~YG--~sE~~lG~al~~~~~~r~~~~~~  158 (267)
                      ++++|++|++||+||||||.+|+.+...+++++.++|++|+|+||||||||++||  .||++||++|++.++ |+     
T Consensus         3 ~r~lG~~gl~vs~lglG~~~~g~~~~~~~~~~a~~il~~A~d~Gin~~DTA~~Yg~g~sE~ilG~~l~~~~~-Rd-----   76 (316)
T COG0667           3 YRRLGRSGLKVSPLGLGTMTLGGDTDDEEEAEAIEILDAALDAGINFFDTADVYGDGRSEEILGEALKERGR-RD-----   76 (316)
T ss_pred             ceecCCCCceecceeeeccccCCCCCchhhhHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHhccCC-CC-----
Confidence            7889999999999999999998765566677888999999999999999999998  599999999998653 33     


Q ss_pred             eEEeecccCCCC--------CCCCHHHHHHHHHHHHHHcCCCceeEEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEEe
Q 024446          159 KVRGLTKWVPPP--------VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL  230 (267)
Q Consensus       159 ~v~i~tK~~~~~--------~~~~~~~i~~~l~~SL~rLg~d~iDl~~lH~pd~~~~~~~~~~~aL~~l~~~G~Ir~iGv  230 (267)
                      +++|+||+....        .+.++++|+++++.||+|||||||||||+||||+..+ .++++++|.+|+++||||+||+
T Consensus        77 ~vvIaTK~g~~~~~~~~~~~~~~s~~~i~~~v~~SL~RLgtd~IDl~~iH~~d~~~p-~~e~~~aL~~l~~~G~ir~iG~  155 (316)
T COG0667          77 KVVIATKVGYRPGDPGPNGVFGLSRDHIRRAVEASLKRLGTDYIDLYQLHRPDPETP-IEETLEALDELVREGKIRYIGV  155 (316)
T ss_pred             eEEEEEeeccCCCCCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEeCCCCCCCC-HHHHHHHHHHHHHcCCeeEEEe
Confidence            888999974321        4579999999999999999999999999999999887 8899999999999999999999


Q ss_pred             cCCCHHHHHHHHHcCCCEEEEeeeCCccCCCCccC
Q 024446          231 TNFDTERLRIILENGIPVVSNQVQLRIGKFIPFLN  265 (267)
Q Consensus       231 Sn~~~~~l~~~~~~g~~~~~~Q~~ysl~~r~~e~~  265 (267)
                      ||++.+++.++.+...+++++|.+||+++|+.|.+
T Consensus       156 S~~~~~~i~~a~~~~~~~~~~Q~~ynl~~R~~e~~  190 (316)
T COG0667         156 SNYSAEQIAEALAVAAPIDSLQPEYNLLERDAEKE  190 (316)
T ss_pred             cCCCHHHHHHHHHhcCCceeecccCccccccchhH
Confidence            99999999999876457999999999999988765

>KOG1575 consensus Voltage-gated shaker-like K+ channel, subunit beta/KCNAB [Energy production and conversion] Back     alignment and domain information
>COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] Back     alignment and domain information
>TIGR01293 Kv_beta voltage-dependent potassium channel beta subunit, animal Back     alignment and domain information
>PRK09912 L-glyceraldehyde 3-phosphate reductase; Provisional Back     alignment and domain information
>PLN02587 L-galactose dehydrogenase Back     alignment and domain information
>cd06660 Aldo_ket_red Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols Back     alignment and domain information
>PRK14863 bifunctional regulator KidO; Provisional Back     alignment and domain information
>KOG1577 consensus Aldo/keto reductase family proteins [General function prediction only] Back     alignment and domain information
>PRK10625 tas putative aldo-keto reductase; Provisional Back     alignment and domain information
>PRK11172 dkgB 2,5-diketo-D-gluconate reductase B; Provisional Back     alignment and domain information
>PRK10376 putative oxidoreductase; Provisional Back     alignment and domain information
>PRK11565 dkgA 2,5-diketo-D-gluconate reductase A; Provisional Back     alignment and domain information
>PF00248 Aldo_ket_red: Aldo/keto reductase family; InterPro: IPR023210 The aldo-keto reductase family includes a number of related monomeric NADPH-dependent oxidoreductases, such as aldehyde reductase, aldose reductase, prostaglandin F synthase, xylose reductase, rho crystallin, and many others [] Back     alignment and domain information
>COG4989 Predicted oxidoreductase [General function prediction only] Back     alignment and domain information
>KOG1576 consensus Predicted oxidoreductase [Energy production and conversion] Back     alignment and domain information
>COG1453 Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only] Back     alignment and domain information
>KOG3023 consensus Glutamate-cysteine ligase regulatory subunit [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13796 GTPase YqeH; Provisional Back     alignment and domain information
>TIGR01228 hutU urocanate hydratase Back     alignment and domain information
>PRK05414 urocanate hydratase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query267
3o0k_A283 Crystal Structure Of AldoKETO REDUCTASE FROM BRUCEL 1e-09
3n2t_A 348 Structure Of The Glycerol Dehydrogenase Akr11b4 Fro 4e-08
3uyi_A 337 Crystal Structure Of Perakine Reductase, Founder Me 5e-07
3v0t_A 337 Crystal Structure Of Perakine Reductase, Founder Me 6e-07
3v0u_A 338 Crystal Structure Of Perakine Reductase, Founder Me 6e-07
4aub_A 366 The Complex Structure Of The Bacterial Aldo-Keto Re 2e-06
3n6q_A 346 Crystal Structure Of Yghz From E. Coli Length = 346 2e-06
3erp_A 353 Structure Of Idp01002, A Putative Oxidoreductase Fr 8e-06
1pz1_A 333 Structure Of Nadph-Dependent Family 11 Aldo-Keto Re 3e-05
1mzr_A296 Structure Of Dkga From E.Coli At 2.13 A Resolution 4e-05
1pyf_A 312 Structure Of Nadph-Dependent Family 11 Aldo-Keto Re 7e-05
2wzm_A 283 Crystal Structure Of A Mycobacterium Aldo-Keto Redu 1e-04
>pdb|3O0K|A Chain A, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA MELITENSIS Length = 283 Back     alignment and structure 
Iteration: 1

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 16/172 (9%)
Query: 86  NDSLEICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPAEDLYGIFI 145
           ND   I ++  G+WQ       I  D+AV A+     AG    D A  YG  E + G  I
Sbjct: 32  NDGNHIPQLGYGVWQ-------ISNDEAVSAVSEALKAGYRHIDTATIYGNEEGV-GKAI 83
Query: 146 NRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYS 205
           N     R   FL      TK         S++  ++ D S +++    +D+   HW   S
Sbjct: 84  NGSGIARADIFL-----TTKLWNSDQGYESTL--KAFDTSLKKLGTDYVDLYLIHWPMPS 136
Query: 206 NPGYLDALNHLTDLKEEGKIKTVALTNFDTERL-RIILENGIPVVSNQVQLR 256
              +++       LKEEG++K++ ++NF T  L R+I E+G+  V NQ++L 
Sbjct: 137 KDLFMETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTPVLNQIELH 188
>pdb|3N2T|A Chain A, Structure Of The Glycerol Dehydrogenase Akr11b4 From Gluconobacter Oxydans Length = 348 Back     alignment and structure
>pdb|3UYI|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 Back     alignment and structure
>pdb|3V0T|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 Back     alignment and structure
>pdb|3V0U|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 338 Back     alignment and structure
>pdb|4AUB|A Chain A, The Complex Structure Of The Bacterial Aldo-Keto Reductase Akr14a1 With Nadp And Citrate Length = 366 Back     alignment and structure
>pdb|3N6Q|A Chain A, Crystal Structure Of Yghz From E. Coli Length = 346 Back     alignment and structure
>pdb|3ERP|A Chain A, Structure Of Idp01002, A Putative Oxidoreductase From And Essential Gene Of Salmonella Typhimurium Length = 353 Back     alignment and structure
>pdb|1PZ1|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase Akr11b(Holo) Length = 333 Back     alignment and structure
>pdb|1MZR|A Chain A, Structure Of Dkga From E.Coli At 2.13 A Resolution Solved By Molecular Replacement Length = 296 Back     alignment and structure
>pdb|1PYF|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase Akr11a(Apo) Length = 312 Back     alignment and structure
>pdb|2WZM|A Chain A, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase In Its Apo And Liganded Form Length = 283 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query267
1pz1_A 333 GSP69, general stress protein 69; beta-alpha barre 2e-18
1pyf_A 312 IOLS protein; beta-alpha barrel, aldo-keto reducta 3e-18
3n2t_A 348 Putative oxidoreductase; aldo/keto reductase super 1e-16
1ur3_M 319 Hypothetical oxidoreductase YDHF; NADP binding, al 1e-15
1gve_A 327 Aflatoxin B1 aldehyde reductase member 3; oxidored 2e-15
2bp1_A 360 Aflatoxin B1 aldehyde reductase member 2; oxidored 5e-14
3erp_A 353 Putative oxidoreductase; funded by the national in 3e-13
3n6q_A 346 YGHZ aldo-keto reductase; TIM barrel, oxidoreducta 5e-13
3v0s_A 337 Perakine reductase; AKR superfamily, oxidoreductas 5e-12
3eau_A 327 Voltage-gated potassium channel subunit beta-2; kv 2e-10
1ynp_A 317 Oxidoreductase, AKR11C1; aldo-keto reductase, NADP 1e-09
3lut_A 367 Voltage-gated potassium channel subunit beta-2; vo 3e-09
1mzr_A296 2,5-diketo-D-gluconate reductase A; alpha/beta-bar 1e-08
3o0k_A283 Aldo/keto reductase; ssgcid, ALS collaborative cry 1e-08
2wzm_A283 Aldo-keto reductase; oxidoreductase; HET: NA7; 1.6 2e-08
1hw6_A 278 2,5-diketo-D-gluconic acid reductase; aldo-keto re 2e-08
1vp5_A 298 2,5-diketo-D-gluconic acid reductase; TM1009, stru 3e-08
1lqa_A 346 TAS protein; TIM barrel, structure 2 function proj 3e-08
3up8_A 298 Putative 2,5-diketo-D-gluconic acid reductase B; n 1e-07
4f40_A288 Prostaglandin F2-alpha synthase/D-arabinose dehyd; 2e-07
4gie_A 290 Prostaglandin F synthase; structural genomics, nia 2e-07
1vbj_A281 Prostaglandin F synthase; TIM barrel, oxidoreducta 3e-07
3f7j_A276 YVGN protein; aldo-keto reductase, oxidoreductase; 4e-07
3b3e_A310 YVGN protein; aldo-keto reductase, oxidoreductase; 5e-07
1qwk_A 317 Aldose reductase, aldo-keto reductase family 1 mem 9e-05
2ao0_A 324 Aldehyde dehydrogenase; TIM barrel, aldo-keto redu 5e-04
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1 Length = 333 Back     alignment and structure
 Score = 82.6 bits (205), Expect = 2e-18
 Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 19/178 (10%)

Query: 85  GNDSLEICRVLNGMWQTSGG-WGRIDRDDAVDAMLRYADAGLTTFDMADHYGP--AEDLY 141
            +  +E  R+  G W   G  WG  D   +++ +    D G+T  D A  YG   +E++ 
Sbjct: 7   ADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIV 66

Query: 142 GIFI-NRVRRERPPEFLDKVRGLTK----WVPPPVKMTSS--IVRESIDVSRRRMDVPCL 194
           G  I   ++R       D+V   TK    W    +   ++   + E ++ S +R+    +
Sbjct: 67  GKAIKEYMKR-------DQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYI 119

Query: 195 DMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQ 252
           D+ Q HW D   P   +    + +L + GKI+ + ++NF  E++        P+ + Q
Sbjct: 120 DLYQVHWPDPLVP-IEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVA-PLHTIQ 175
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A* Length = 312 Back     alignment and structure
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} Length = 348 Back     alignment and structure
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A* Length = 319 Back     alignment and structure
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A* Length = 327 Back     alignment and structure
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp} Length = 353 Back     alignment and structure
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} Length = 346 Back     alignment and structure
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A* Length = 337 Back     alignment and structure
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A* Length = 327 Back     alignment and structure
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A* Length = 317 Back     alignment and structure
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus} Length = 367 Back     alignment and structure
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1 Length = 296 Back     alignment and structure
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar} Length = 283 Back     alignment and structure
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A Length = 283 Back     alignment and structure
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A* Length = 278 Back     alignment and structure
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1 Length = 298 Back     alignment and structure
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1 Length = 346 Back     alignment and structure
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti} Length = 298 Back     alignment and structure
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} Length = 288 Back     alignment and structure
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A* Length = 290 Back     alignment and structure
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei} Length = 281 Back     alignment and structure
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A* Length = 276 Back     alignment and structure
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1 Length = 317 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query267
1pyf_A 312 IOLS protein; beta-alpha barrel, aldo-keto reducta 100.0
3n2t_A 348 Putative oxidoreductase; aldo/keto reductase super 100.0
3v0s_A 337 Perakine reductase; AKR superfamily, oxidoreductas 100.0
1pz1_A 333 GSP69, general stress protein 69; beta-alpha barre 100.0
1ur3_M 319 Hypothetical oxidoreductase YDHF; NADP binding, al 100.0
4exb_A292 Putative uncharacterized protein; aldo-keto reduct 100.0
3eau_A 327 Voltage-gated potassium channel subunit beta-2; kv 100.0
3lut_A 367 Voltage-gated potassium channel subunit beta-2; vo 100.0
1ynp_A 317 Oxidoreductase, AKR11C1; aldo-keto reductase, NADP 100.0
3erp_A 353 Putative oxidoreductase; funded by the national in 100.0
3n6q_A 346 YGHZ aldo-keto reductase; TIM barrel, oxidoreducta 100.0
1hw6_A 278 2,5-diketo-D-gluconic acid reductase; aldo-keto re 100.0
3o0k_A283 Aldo/keto reductase; ssgcid, ALS collaborative cry 100.0
2wzm_A283 Aldo-keto reductase; oxidoreductase; HET: NA7; 1.6 100.0
3up8_A 298 Putative 2,5-diketo-D-gluconic acid reductase B; n 100.0
3f7j_A276 YVGN protein; aldo-keto reductase, oxidoreductase; 100.0
1lqa_A 346 TAS protein; TIM barrel, structure 2 function proj 100.0
3ln3_A 324 Dihydrodiol dehydrogenase; putative reductase, str 100.0
3b3e_A310 YVGN protein; aldo-keto reductase, oxidoreductase; 100.0
1vbj_A281 Prostaglandin F synthase; TIM barrel, oxidoreducta 100.0
4f40_A288 Prostaglandin F2-alpha synthase/D-arabinose dehyd; 100.0
1vp5_A 298 2,5-diketo-D-gluconic acid reductase; TM1009, stru 100.0
2bp1_A 360 Aflatoxin B1 aldehyde reductase member 2; oxidored 100.0
1mzr_A296 2,5-diketo-D-gluconate reductase A; alpha/beta-bar 100.0
3buv_A 326 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reduc 100.0
1zgd_A 312 Chalcone reductase; polyketide, deoxychalcone, iso 100.0
3h7u_A 335 Aldo-keto reductase; stress response, NADP, drough 100.0
1afs_A 323 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; 100.0
1qwk_A 317 Aldose reductase, aldo-keto reductase family 1 mem 100.0
1s1p_A 331 Aldo-keto reductase family 1 member C3; TIM-barrel 100.0
1mi3_A 322 Xylose reductase, XR; aldo-keto reductase, beta-al 100.0
1us0_A 316 Aldose reductase; oxidoreductase, NADP, IDD594; HE 100.0
4gie_A 290 Prostaglandin F synthase; structural genomics, nia 100.0
3o3r_A 316 Aldo-keto reductase family 1, member B7; aldose re 100.0
1gve_A 327 Aflatoxin B1 aldehyde reductase member 3; oxidored 100.0
3h7r_A 331 Aldo-keto reductase; stress response, NADP, drough 100.0
4gac_A 324 Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldhe 100.0
3krb_A 334 Aldose reductase; ssgcid, SBRI, emerald biostructu 100.0
2bgs_A 344 Aldose reductase; holoenzyme, aldo/keto reductase, 100.0
3b3d_A314 YTBE protein, putative morphine dehydrogenase; ald 100.0
3cf4_A 807 Acetyl-COA decarboxylase/synthase alpha subunit; m 93.47
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A* Back     alignment and structure
Probab=100.00  E-value=5.3e-44  Score=324.55  Aligned_cols=175  Identities=22%  Similarity=0.317  Sum_probs=157.3

Q ss_pred             eeecCCcccccCcceeccccCCCC--CCCCCHHHHHHHHHHHHHcCCCEEEcCCCCCC--cHHHHHHHHhhhhccCCCcc
Q 024446           81 TVSNGNDSLEICRVLNGMWQTSGG--WGRIDRDDAVDAMLRYADAGLTTFDMADHYGP--AEDLYGIFINRVRRERPPEF  156 (267)
Q Consensus        81 ~~~lG~tg~~Vs~LGlGt~~~g~~--~~~~~~~~~~~~l~~A~d~Gin~fDTA~~YG~--sE~~lG~al~~~~~~r~~~~  156 (267)
                      +++||+||++||+||||||++++.  |+..+++++.++|+.|++.||||||||+.||+  +|++||++|++.+|+     
T Consensus         3 ~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~-----   77 (312)
T 1pyf_A            3 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNRE-----   77 (312)
T ss_dssp             CEECTTSCCEECSBCEECTTSSCTTTCSSCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGG-----
T ss_pred             eeecCCCCCcccCEeEeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhcCCC-----
Confidence            788999999999999999999864  66688999999999999999999999999985  899999999864333     


Q ss_pred             eeeEEeecccCCCC------CCCCHHHHHHHHHHHHHHcCCCceeEEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEEe
Q 024446          157 LDKVRGLTKWVPPP------VKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL  230 (267)
Q Consensus       157 ~~~v~i~tK~~~~~------~~~~~~~i~~~l~~SL~rLg~d~iDl~~lH~pd~~~~~~~~~~~aL~~l~~~G~Ir~iGv  230 (267)
                        +++|+||+...+      .+.+++.+++++++||+|||+||||||++|||++..+ .+++|++|++|+++||||+|||
T Consensus        78 --~~~i~TK~g~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~-~~e~~~al~~l~~~Gkir~iGv  154 (312)
T 1pyf_A           78 --DVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTP-KDEAVNALNEMKKAGKIRSIGV  154 (312)
T ss_dssp             --GCEEEEEECEEEETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSC-HHHHHHHHHHHHHTTSBSCEEE
T ss_pred             --eEEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCC-HHHHHHHHHHHHHCCCcCEEEe
Confidence              788999953111      3678999999999999999999999999999988766 8999999999999999999999


Q ss_pred             cCCCHHHHHHHHHcCCCEEEEeeeCCccCCCCcc
Q 024446          231 TNFDTERLRIILENGIPVVSNQVQLRIGKFIPFL  264 (267)
Q Consensus       231 Sn~~~~~l~~~~~~g~~~~~~Q~~ysl~~r~~e~  264 (267)
                      |||++++++++++. .+|+++|++||++++++|.
T Consensus       155 Sn~~~~~l~~~~~~-~~~~~~Q~~~~~~~~~~e~  187 (312)
T 1pyf_A          155 SNFSLEQLKEANKD-GLVDVLQGEYNLLNREAEK  187 (312)
T ss_dssp             ESCCHHHHHHHTTT-SCCCEEEEECBTTBCGGGT
T ss_pred             cCCCHHHHHHHHhh-CCceEEeccCCccccchHH
Confidence            99999999999875 4799999999999999874
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0 Back     alignment and structure
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A* Back     alignment and structure
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1 Back     alignment and structure
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A* Back     alignment and structure
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A Back     alignment and structure
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A* Back     alignment and structure
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus} Back     alignment and structure
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A* Back     alignment and structure
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp} Back     alignment and structure
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A* Back     alignment and structure
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A* Back     alignment and structure
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar} Back     alignment and structure
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A Back     alignment and structure
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti} Back     alignment and structure
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A* Back     alignment and structure
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1 Back     alignment and structure
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1 Back     alignment and structure
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei} Back     alignment and structure
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A* Back     alignment and structure
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1 Back     alignment and structure
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1 Back     alignment and structure
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A* Back     alignment and structure
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa} Back     alignment and structure
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana} Back     alignment and structure
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A* Back     alignment and structure
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1 Back     alignment and structure
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ... Back     alignment and structure
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A* Back     alignment and structure
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ... Back     alignment and structure
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A* Back     alignment and structure
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A* Back     alignment and structure
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A* Back     alignment and structure
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana} Back     alignment and structure
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A* Back     alignment and structure
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia} Back     alignment and structure
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A* Back     alignment and structure
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis} Back     alignment and structure
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 267
d1pyfa_ 311 c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillu 3e-16
d1pz1a_ 333 c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillu 3e-15
d1lqaa_ 346 c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 3e-14
d1s1pa_ 315 c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (ak 4e-13
d1mzra_274 c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase 1e-12
d3eaua1 326 c.1.7.1 (A:36-361) Voltage-dependent K+ channel be 3e-12
d1afsa_ 319 c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase 4e-12
d1hqta_ 324 c.1.7.1 (A:) Aldose reductase (aldehyde reductase) 6e-11
d1us0a_ 314 c.1.7.1 (A:) Aldose reductase (aldehyde reductase) 3e-10
d1frba_ 315 c.1.7.1 (A:) FR-1 (fibroblast growth factor-induce 4e-10
d1hw6a_262 c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase 1e-09
d1qwka_ 312 c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematod 5e-09
d1ur3m_ 298 c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Esc 5e-09
d1mi3a_ 319 c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenu 9e-08
d1vp5a_ 284 c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase 1e-07
d1gvea_ 324 c.1.7.1 (A:) Aflatoxin aldehyde reductase (akr7a1) 5e-07
>d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus subtilis [TaxId: 1423]} Length = 311 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: NAD(P)-linked oxidoreductase
family: Aldo-keto reductases (NADP)
domain: Putative oxidoreductase IolS
species: Bacillus subtilis [TaxId: 1423]

 Score = 74.6 bits (182), Expect = 3e-16
 Identities = 36/174 (20%), Positives = 76/174 (43%), Gaps = 7/174 (4%)

Query: 85  GNDSLEICRVLNGMWQTSG--GWGRIDRDDAVDAMLRYADAGLTTFDMADHYGP--AEDL 140
           G   L++  +  G     G   +  ++ +   + +      G+T  D A  YG   +E+L
Sbjct: 6   GKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEEL 65

Query: 141 YGIFINRVRRERPPEFLDKVRGLTKWVPPPVKMTSSIVRESIDVSRRRMDVPCLDMLQFH 200
            G  +             K     +        +   +++S+D S +R++   +D+   H
Sbjct: 66  IGEVLRE-FNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIH 124

Query: 201 WWDYSNPGYLDALNHLTDLKEEGKIKTVALTNFDTERLRIILENGIPVVSNQVQ 254
           + D   P   +A+N L ++K+ GKI+++ ++NF  E+L+   ++G  V   Q +
Sbjct: 125 FPDEHTPKD-EAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDG-LVDVLQGE 176
>d1pz1a_ c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillus subtilis [TaxId: 1423]} Length = 333 Back     information, alignment and structure
>d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]} Length = 346 Back     information, alignment and structure
>d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3) {Human (Homo sapiens) [TaxId: 9606]} Length = 315 Back     information, alignment and structure
>d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Escherichia coli [TaxId: 562]} Length = 274 Back     information, alignment and structure
>d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 326 Back     information, alignment and structure
>d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 319 Back     information, alignment and structure
>d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig (Sus scrofa) [TaxId: 9823]} Length = 324 Back     information, alignment and structure
>d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]} Length = 314 Back     information, alignment and structure
>d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]} Length = 315 Back     information, alignment and structure
>d1hw6a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Corynebacterium sp. [TaxId: 1720]} Length = 262 Back     information, alignment and structure
>d1qwka_ c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 312 Back     information, alignment and structure
>d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia coli [TaxId: 562]} Length = 298 Back     information, alignment and structure
>d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis) [TaxId: 45596]} Length = 319 Back     information, alignment and structure
>d1vp5a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Thermotoga maritima [TaxId: 2336]} Length = 284 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query267
d1pyfa_ 311 Putative oxidoreductase IolS {Bacillus subtilis [T 100.0
d1ur3m_ 298 Hypothetical oxidoreductase YdhF {Escherichia coli 100.0
d1gvea_ 324 Aflatoxin aldehyde reductase (akr7a1) {Rat (Rattus 100.0
d1pz1a_ 333 Putative oxidoreductase YhdN {Bacillus subtilis [T 100.0
d1lqaa_ 346 Tas protein {Escherichia coli [TaxId: 562]} 100.0
d1mi3a_ 319 Xylose reductase {Fungi (Candida tenuis) [TaxId: 4 100.0
d1vp5a_ 284 2,5-diketo-D-gluconic acid reductase A {Thermotoga 100.0
d1hw6a_262 2,5-diketo-D-gluconic acid reductase A {Corynebact 100.0
d1qwka_ 312 Hypothetical protein C07D8.6 {Nematode (Caenorhabd 100.0
d3eaua1 326 Voltage-dependent K+ channel beta subunit {Rat (Ra 100.0
d1mzra_274 2,5-diketo-D-gluconic acid reductase A {Escherichi 100.0
d1s1pa_ 315 Prostaglandin d2 11-ketoreductase (akr1c3) {Human 100.0
d1us0a_ 314 Aldose reductase (aldehyde reductase) {Human (Homo 100.0
d1afsa_ 319 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus 100.0
d1hqta_ 324 Aldose reductase (aldehyde reductase) {Pig (Sus sc 100.0
d1frba_ 315 FR-1 (fibroblast growth factor-induced) protein {M 100.0
d1uwka_ 554 Urocanate hydratase HutU {Pseudomonas putida [TaxI 85.1
d1x87a_ 545 Urocanate hydratase HutU {Bacillus stearothermophi 83.9
d1vk3a496 Phosphoribosylformylglycinamidine synthase II, dom 81.13
>d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: NAD(P)-linked oxidoreductase
family: Aldo-keto reductases (NADP)
domain: Putative oxidoreductase IolS
species: Bacillus subtilis [TaxId: 1423]

Probab=100.00  E-value=1.7e-40  Score=297.77  Aligned_cols=176  Identities=23%  Similarity=0.323  Sum_probs=157.6

Q ss_pred             eeecCCcccccCcceeccccCCC--CCCCCCHHHHHHHHHHHHHcCCCEEEcCCCCCC--cHHHHHHHHhhhhccCCCcc
Q 024446           81 TVSNGNDSLEICRVLNGMWQTSG--GWGRIDRDDAVDAMLRYADAGLTTFDMADHYGP--AEDLYGIFINRVRRERPPEF  156 (267)
Q Consensus        81 ~~~lG~tg~~Vs~LGlGt~~~g~--~~~~~~~~~~~~~l~~A~d~Gin~fDTA~~YG~--sE~~lG~al~~~~~~r~~~~  156 (267)
                      +++||+||++||+||||||++|+  .|+..+++++.++|+.|++.|||+||||+.||.  +|+++|++++..+++     
T Consensus         2 ~~rLG~tgl~vS~iglGt~~~g~~~~~~~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lg~~l~~~~r~-----   76 (311)
T d1pyfa_           2 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNRE-----   76 (311)
T ss_dssp             CEECTTSCCEECSBCEECTTSSCTTTCSSCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGG-----
T ss_pred             CcccCCCCCeecceeeeCcccCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEehhhcCCCccHHHHhhhhhccccc-----
Confidence            68899999999999999999985  456789999999999999999999999999986  999999999876555     


Q ss_pred             eeeEEeecccCC------CCCCCCHHHHHHHHHHHHHHcCCCceeEEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEEe
Q 024446          157 LDKVRGLTKWVP------PPVKMTSSIVRESIDVSRRRMDVPCLDMLQFHWWDYSNPGYLDALNHLTDLKEEGKIKTVAL  230 (267)
Q Consensus       157 ~~~v~i~tK~~~------~~~~~~~~~i~~~l~~SL~rLg~d~iDl~~lH~pd~~~~~~~~~~~aL~~l~~~G~Ir~iGv  230 (267)
                        +++++||++.      ...+.+++.+++++++||++|++||+|+|++|+|+...+ .++++++|++++++||||+|||
T Consensus        77 --~~~i~tK~~~~~~~~~~~~~~~~~~i~~s~~~SL~rl~~d~iDl~~lh~~~~~~~-~~~~~~~l~~l~~~Gkir~iGv  153 (311)
T d1pyfa_          77 --DVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTP-KDEAVNALNEMKKAGKIRSIGV  153 (311)
T ss_dssp             --GCEEEEEECEEEETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSC-HHHHHHHHHHHHHTTSBSCEEE
T ss_pred             --ceecceeccCCCCCcccccccchHHHHHHHHhhHHhhCCcHHhhhcccCCCcccc-hhhHHHHHHHHHhCCeEEeecc
Confidence              5667777632      124689999999999999999999999999999998777 8899999999999999999999


Q ss_pred             cCCCHHHHHHHHHcCCCEEEEeeeCCccCCCCccC
Q 024446          231 TNFDTERLRIILENGIPVVSNQVQLRIGKFIPFLN  265 (267)
Q Consensus       231 Sn~~~~~l~~~~~~g~~~~~~Q~~ysl~~r~~e~~  265 (267)
                      |||+.+.+.++.+.+ +++++|++||++++.++.+
T Consensus       154 s~~~~~~~~~~~~~~-~~~~~q~~~n~~~~~~~~~  187 (311)
T d1pyfa_         154 SNFSLEQLKEANKDG-LVDVLQGEYNLLNREAEKT  187 (311)
T ss_dssp             ESCCHHHHHHHTTTS-CCCEEEEECBTTBCGGGTT
T ss_pred             cCCcHHHHHHHhhcC-CcceEeeeecccchhhhHH
Confidence            999999999988764 7999999999999987754
>d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pz1a_ c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis) [TaxId: 45596]} Back     information, alignment and structure
>d1vp5a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1hw6a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Corynebacterium sp. [TaxId: 1720]} Back     information, alignment and structure
>d1qwka_ c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1uwka_ e.51.1.1 (A:) Urocanate hydratase HutU {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1x87a_ e.51.1.1 (A:) Urocanate hydratase HutU {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1vk3a4 d.139.1.1 (A:508-603) Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure